Query 022879
Match_columns 290
No_of_seqs 141 out of 1565
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 06:48:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022879.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022879hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 2.1E-54 4.5E-59 347.3 27.3 285 1-289 63-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 2.4E-52 5.2E-57 345.5 26.9 274 1-290 59-337 (339)
3 PRK09880 L-idonate 5-dehydroge 100.0 9.8E-47 2.1E-51 325.0 31.9 279 1-290 61-343 (343)
4 cd08239 THR_DH_like L-threonin 100.0 1.4E-44 2.9E-49 311.6 32.1 280 1-290 56-339 (339)
5 COG1063 Tdh Threonine dehydrog 100.0 7.4E-44 1.6E-48 305.8 30.8 282 2-290 58-350 (350)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 2.2E-43 4.8E-48 307.2 31.8 281 1-288 63-371 (371)
7 PRK10309 galactitol-1-phosphat 100.0 4E-43 8.8E-48 303.2 32.7 282 1-290 55-346 (347)
8 KOG0023 Alcohol dehydrogenase, 100.0 2.9E-44 6.2E-49 288.2 23.4 278 1-290 67-354 (360)
9 COG1062 AdhC Zn-dependent alco 100.0 1.6E-43 3.4E-48 287.1 24.8 282 1-290 57-366 (366)
10 PLN02827 Alcohol dehydrogenase 100.0 1.9E-42 4.1E-47 301.4 31.6 283 2-290 66-376 (378)
11 PLN02740 Alcohol dehydrogenase 100.0 1.7E-42 3.6E-47 302.5 31.3 284 1-290 67-381 (381)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.5E-42 9.7E-47 298.5 32.3 282 2-290 58-368 (368)
13 TIGR03366 HpnZ_proposed putati 100.0 7.2E-43 1.6E-47 292.6 25.9 260 2-269 1-279 (280)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.1E-42 1.1E-46 297.4 31.9 282 1-289 56-357 (358)
15 cd08233 butanediol_DH_like (2R 100.0 1.6E-41 3.5E-46 293.7 32.4 282 2-289 67-351 (351)
16 TIGR03201 dearomat_had 6-hydro 100.0 1.3E-41 2.9E-46 293.8 31.3 282 1-290 55-349 (349)
17 PLN02586 probable cinnamyl alc 100.0 1.4E-41 3E-46 294.2 30.3 275 1-290 68-353 (360)
18 cd08301 alcohol_DH_plants Plan 100.0 3.1E-41 6.6E-46 293.7 31.6 283 1-289 58-369 (369)
19 TIGR02819 fdhA_non_GSH formald 100.0 2.7E-41 5.8E-46 294.7 29.9 283 1-290 63-390 (393)
20 PLN02178 cinnamyl-alcohol dehy 100.0 3.6E-41 7.8E-46 292.5 30.6 274 2-290 63-348 (375)
21 cd08300 alcohol_DH_class_III c 100.0 8.8E-41 1.9E-45 290.6 32.0 283 1-289 58-368 (368)
22 cd08277 liver_alcohol_DH_like 100.0 2.6E-40 5.7E-45 287.3 31.8 282 1-289 57-365 (365)
23 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.7E-40 3.7E-45 284.2 30.0 267 1-288 58-328 (329)
24 PLN02702 L-idonate 5-dehydroge 100.0 9.9E-40 2.2E-44 283.8 33.3 288 2-289 76-363 (364)
25 COG0604 Qor NADPH:quinone redu 100.0 2.4E-40 5.3E-45 280.4 28.6 255 1-290 59-326 (326)
26 cd08230 glucose_DH Glucose deh 100.0 7.4E-40 1.6E-44 283.6 28.8 273 2-290 60-355 (355)
27 KOG0022 Alcohol dehydrogenase, 100.0 9.7E-40 2.1E-44 261.0 25.1 284 1-290 63-375 (375)
28 cd08231 MDR_TM0436_like Hypoth 100.0 9E-39 1.9E-43 277.6 32.7 284 2-290 57-361 (361)
29 PLN02514 cinnamyl-alcohol dehy 100.0 1.3E-38 2.9E-43 275.6 31.1 275 1-290 65-350 (357)
30 KOG1197 Predicted quinone oxid 100.0 9.8E-40 2.1E-44 253.5 20.8 251 1-289 66-329 (336)
31 PRK10083 putative oxidoreducta 100.0 2.9E-38 6.4E-43 272.2 31.2 280 2-290 56-337 (339)
32 cd05285 sorbitol_DH Sorbitol d 100.0 1.7E-37 3.6E-42 267.9 31.8 282 2-289 57-342 (343)
33 cd08237 ribitol-5-phosphate_DH 100.0 1.1E-38 2.4E-43 274.4 24.4 268 1-290 60-339 (341)
34 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.5E-37 1.4E-41 264.9 32.7 281 2-288 65-350 (350)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 6.7E-37 1.5E-41 264.9 32.3 283 2-290 56-351 (351)
36 cd08296 CAD_like Cinnamyl alco 100.0 7.5E-37 1.6E-41 262.7 31.3 274 2-289 57-333 (333)
37 cd08232 idonate-5-DH L-idonate 100.0 1.4E-36 3E-41 261.8 31.1 280 2-290 56-339 (339)
38 cd05279 Zn_ADH1 Liver alcohol 100.0 1.7E-36 3.7E-41 263.4 31.5 281 2-289 56-365 (365)
39 cd08246 crotonyl_coA_red croto 100.0 1.3E-36 2.9E-41 266.8 30.6 280 2-289 84-392 (393)
40 TIGR01202 bchC 2-desacetyl-2-h 100.0 3E-37 6.4E-42 262.0 25.5 248 1-289 60-308 (308)
41 cd08238 sorbose_phosphate_red 100.0 1.2E-36 2.6E-41 267.8 30.2 271 2-290 65-368 (410)
42 cd05284 arabinose_DH_like D-ar 100.0 3E-36 6.4E-41 259.9 31.4 276 2-290 60-340 (340)
43 cd08283 FDH_like_1 Glutathione 100.0 3.6E-36 7.8E-41 263.1 31.8 283 2-290 57-386 (386)
44 cd08299 alcohol_DH_class_I_II_ 100.0 7.2E-36 1.6E-40 259.9 32.0 283 2-290 63-373 (373)
45 PRK05396 tdh L-threonine 3-deh 100.0 7.8E-36 1.7E-40 257.3 31.4 280 1-290 59-340 (341)
46 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1E-35 2.2E-40 260.2 31.7 281 2-288 90-383 (384)
47 cd08286 FDH_like_ADH2 formalde 100.0 1.7E-35 3.6E-40 255.7 31.9 283 2-290 57-345 (345)
48 TIGR01751 crot-CoA-red crotony 100.0 8.5E-36 1.8E-40 261.8 30.1 281 2-290 80-387 (398)
49 TIGR00692 tdh L-threonine 3-de 100.0 1.4E-35 3E-40 255.6 30.9 280 2-290 58-340 (340)
50 cd08284 FDH_like_2 Glutathione 100.0 2.3E-35 4.9E-40 254.8 31.6 280 2-289 56-343 (344)
51 cd08235 iditol_2_DH_like L-idi 100.0 2.8E-35 6.1E-40 254.1 32.2 280 2-289 56-343 (343)
52 cd08278 benzyl_alcohol_DH Benz 100.0 1.9E-35 4.1E-40 256.9 31.2 278 2-289 58-365 (365)
53 cd05278 FDH_like Formaldehyde 100.0 2.4E-35 5.2E-40 254.9 30.6 283 2-290 57-347 (347)
54 cd08261 Zn_ADH7 Alcohol dehydr 100.0 5.6E-35 1.2E-39 251.6 32.3 280 2-290 56-337 (337)
55 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.2E-35 9.2E-40 252.8 31.2 272 2-289 66-341 (341)
56 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.1E-35 8.8E-40 253.7 31.0 279 2-290 69-350 (350)
57 cd08242 MDR_like Medium chain 100.0 6.2E-35 1.3E-39 249.5 30.5 268 1-290 52-319 (319)
58 cd08279 Zn_ADH_class_III Class 100.0 9.2E-35 2E-39 252.5 31.5 280 2-287 56-362 (363)
59 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.8E-35 2.1E-39 252.8 31.3 282 2-289 56-367 (367)
60 cd05281 TDH Threonine dehydrog 100.0 1E-34 2.3E-39 250.3 31.1 279 2-290 60-341 (341)
61 cd08287 FDH_like_ADH3 formalde 100.0 1.1E-34 2.3E-39 250.6 30.9 280 2-289 56-344 (345)
62 cd05283 CAD1 Cinnamyl alcohol 100.0 1E-34 2.2E-39 249.9 29.4 273 2-289 56-337 (337)
63 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.6E-34 5.7E-39 248.2 31.4 280 2-289 57-344 (345)
64 cd08236 sugar_DH NAD(P)-depend 100.0 9.8E-34 2.1E-38 244.5 31.5 279 2-288 55-343 (343)
65 cd08234 threonine_DH_like L-th 100.0 9.8E-34 2.1E-38 243.6 31.0 277 2-288 55-333 (334)
66 PLN03154 putative allyl alcoho 100.0 4.8E-34 1E-38 246.1 28.6 248 2-290 75-345 (348)
67 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.3E-33 2.9E-38 243.1 31.4 277 2-290 59-338 (338)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 1.7E-33 3.7E-38 242.8 31.9 278 2-290 59-341 (341)
69 PRK09422 ethanol-active dehydr 100.0 1.1E-33 2.4E-38 243.6 30.5 277 2-290 56-336 (338)
70 cd08282 PFDH_like Pseudomonas 100.0 2.1E-33 4.5E-38 245.0 31.3 281 1-290 55-375 (375)
71 PRK13771 putative alcohol dehy 100.0 8.7E-34 1.9E-38 243.9 27.7 272 2-290 57-333 (334)
72 cd08291 ETR_like_1 2-enoyl thi 100.0 3.1E-33 6.6E-38 239.5 28.3 249 2-289 63-324 (324)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.1E-32 2.4E-37 236.8 30.0 272 2-289 57-332 (332)
74 cd08266 Zn_ADH_like1 Alcohol d 100.0 3.3E-32 7.2E-37 234.5 30.8 278 2-290 60-342 (342)
75 cd08298 CAD2 Cinnamyl alcohol 100.0 3.5E-32 7.6E-37 233.5 29.7 265 2-288 61-329 (329)
76 cd08274 MDR9 Medium chain dehy 100.0 2.5E-32 5.3E-37 236.4 28.9 267 2-290 80-350 (350)
77 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.2E-32 4.7E-37 234.4 27.7 264 2-286 57-324 (325)
78 cd08293 PTGR2 Prostaglandin re 100.0 2.6E-32 5.6E-37 235.8 28.1 250 1-290 70-345 (345)
79 cd08292 ETR_like_2 2-enoyl thi 100.0 1.2E-31 2.5E-36 229.7 28.8 250 2-289 61-324 (324)
80 TIGR02825 B4_12hDH leukotriene 100.0 1.2E-31 2.7E-36 229.6 27.4 245 1-289 59-325 (325)
81 cd08245 CAD Cinnamyl alcohol d 100.0 6.4E-31 1.4E-35 225.7 29.5 271 2-288 56-330 (330)
82 cd08295 double_bond_reductase_ 100.0 4.2E-31 9.2E-36 227.5 28.0 248 2-290 70-338 (338)
83 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.5E-31 7.7E-36 224.8 26.7 243 2-251 58-306 (306)
84 cd08294 leukotriene_B4_DH_like 100.0 4.7E-31 1E-35 226.5 27.5 244 2-290 62-329 (329)
85 KOG0025 Zn2+-binding dehydroge 100.0 3.5E-31 7.6E-36 209.5 23.8 251 2-289 80-351 (354)
86 cd08269 Zn_ADH9 Alcohol dehydr 100.0 4.6E-30 1E-34 218.6 29.4 250 2-288 54-311 (312)
87 cd08244 MDR_enoyl_red Possible 100.0 7.4E-30 1.6E-34 218.5 29.3 253 2-290 62-324 (324)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.7E-29 3.7E-34 217.4 28.6 251 2-289 61-334 (336)
89 cd08276 MDR7 Medium chain dehy 100.0 4.4E-29 9.5E-34 214.7 30.6 273 2-290 60-336 (336)
90 PTZ00354 alcohol dehydrogenase 100.0 2.8E-29 6.1E-34 215.8 28.8 251 2-290 61-328 (334)
91 cd08290 ETR 2-enoyl thioester 100.0 2.3E-29 4.9E-34 217.1 27.9 253 2-290 66-341 (341)
92 cd05188 MDR Medium chain reduc 100.0 2.1E-29 4.5E-34 210.1 26.2 235 2-247 32-270 (271)
93 cd05282 ETR_like 2-enoyl thioe 100.0 4.6E-29 9.9E-34 213.5 28.1 250 2-289 59-323 (323)
94 KOG1198 Zinc-binding oxidoredu 100.0 4.6E-30 9.9E-35 217.8 21.1 222 58-290 100-345 (347)
95 cd08270 MDR4 Medium chain dehy 100.0 6.7E-29 1.4E-33 210.9 27.7 242 2-290 54-305 (305)
96 cd08255 2-desacetyl-2-hydroxye 100.0 7.2E-29 1.6E-33 207.9 26.5 241 1-288 22-277 (277)
97 PRK10754 quinone oxidoreductas 100.0 1.4E-28 3E-33 211.0 27.0 253 2-289 60-326 (327)
98 COG2130 Putative NADP-dependen 100.0 1E-28 2.2E-33 197.4 23.8 233 16-290 86-338 (340)
99 cd08243 quinone_oxidoreductase 100.0 4.2E-28 9.1E-33 207.2 27.5 250 2-288 59-319 (320)
100 cd08249 enoyl_reductase_like e 100.0 4.4E-28 9.6E-33 208.8 26.6 259 2-290 57-339 (339)
101 cd08250 Mgc45594_like Mgc45594 100.0 8.6E-28 1.9E-32 206.2 27.4 248 2-289 63-329 (329)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 2.1E-27 4.6E-32 203.6 27.7 254 2-290 60-326 (326)
103 cd08251 polyketide_synthase po 100.0 3.7E-27 8.1E-32 199.6 27.9 251 2-288 40-303 (303)
104 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.5E-27 7.6E-32 202.0 27.8 252 2-290 60-325 (325)
105 cd08252 AL_MDR Arginate lyase 100.0 5.7E-27 1.2E-31 201.7 28.8 252 2-289 62-336 (336)
106 cd05286 QOR2 Quinone oxidoredu 100.0 6.8E-27 1.5E-31 199.3 28.4 251 2-290 57-320 (320)
107 cd08253 zeta_crystallin Zeta-c 100.0 9.2E-27 2E-31 199.0 28.1 256 2-290 60-325 (325)
108 TIGR02823 oxido_YhdH putative 100.0 1.4E-26 3.1E-31 198.2 28.9 251 2-290 59-323 (323)
109 cd08247 AST1_like AST1 is a cy 100.0 1.1E-26 2.4E-31 201.2 28.3 260 2-290 61-352 (352)
110 cd05288 PGDH Prostaglandin deh 100.0 5.6E-27 1.2E-31 201.2 26.0 243 2-288 67-329 (329)
111 cd05276 p53_inducible_oxidored 100.0 1.4E-26 3.1E-31 197.6 27.3 249 2-288 60-323 (323)
112 TIGR02824 quinone_pig3 putativ 100.0 3.7E-26 8.1E-31 195.3 28.5 251 2-290 60-325 (325)
113 smart00829 PKS_ER Enoylreducta 100.0 3.7E-26 8E-31 191.9 26.7 247 2-288 26-288 (288)
114 cd08272 MDR6 Medium chain dehy 100.0 6.9E-26 1.5E-30 193.9 27.8 251 2-290 60-326 (326)
115 cd08248 RTN4I1 Human Reticulon 100.0 3.5E-26 7.7E-31 197.9 26.0 249 2-289 76-350 (350)
116 cd08268 MDR2 Medium chain dehy 100.0 3E-25 6.6E-30 189.9 29.8 256 2-290 60-328 (328)
117 cd05195 enoyl_red enoyl reduct 100.0 1.2E-25 2.6E-30 189.0 26.5 247 2-288 30-293 (293)
118 cd08273 MDR8 Medium chain dehy 100.0 1.3E-25 2.8E-30 192.9 26.9 244 2-288 60-330 (331)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.9E-25 4.2E-30 190.7 27.5 250 2-289 60-323 (323)
120 cd08288 MDR_yhdh Yhdh putative 100.0 2.9E-25 6.2E-30 190.2 28.4 251 2-290 60-324 (324)
121 cd08267 MDR1 Medium chain dehy 99.9 2E-25 4.4E-30 190.5 25.7 249 2-288 61-319 (319)
122 cd08271 MDR5 Medium chain dehy 99.9 4.4E-25 9.5E-30 188.9 27.4 253 2-290 59-325 (325)
123 cd08275 MDR3 Medium chain dehy 99.9 8.3E-25 1.8E-29 188.1 28.9 249 2-290 59-337 (337)
124 cd05289 MDR_like_2 alcohol deh 99.9 5.8E-25 1.3E-29 186.7 24.4 243 2-288 62-309 (309)
125 KOG1196 Predicted NAD-dependen 99.9 6.6E-25 1.4E-29 175.1 21.3 242 6-290 78-340 (343)
126 KOG1202 Animal-type fatty acid 99.9 1.1E-25 2.3E-30 205.5 15.1 243 2-290 1483-1741(2376)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 1.2E-17 2.6E-22 123.8 13.2 128 118-250 1-130 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 1.9E-17 4E-22 118.6 5.5 77 1-78 33-109 (109)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1E-12 2.2E-17 113.9 15.9 164 105-289 199-375 (413)
130 PRK09424 pntA NAD(P) transhydr 99.5 1.6E-12 3.5E-17 115.3 16.0 155 105-260 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.4 1.4E-13 3.1E-18 101.4 3.1 117 151-288 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.7 7.5E-07 1.6E-11 79.4 15.3 105 106-212 162-285 (511)
133 PRK11873 arsM arsenite S-adeno 98.6 9.2E-07 2E-11 73.9 11.7 171 103-287 73-258 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.4 7.8E-06 1.7E-10 71.6 13.6 103 96-215 198-303 (425)
135 PRK08306 dipicolinate synthase 98.4 4.8E-05 1E-09 64.1 17.2 112 107-234 151-262 (296)
136 PRK00517 prmA ribosomal protei 98.4 2.9E-05 6.2E-10 64.0 15.4 130 64-213 79-215 (250)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.3 2.3E-06 5E-11 72.7 8.1 107 74-193 140-251 (311)
138 TIGR01035 hemA glutamyl-tRNA r 98.3 9.1E-08 2E-12 84.4 -1.3 157 4-193 91-253 (417)
139 TIGR00936 ahcY adenosylhomocys 98.2 3.9E-05 8.4E-10 66.9 12.6 93 105-214 192-285 (406)
140 PF11017 DUF2855: Protein of u 98.1 0.0015 3.2E-08 54.8 20.3 185 9-213 39-233 (314)
141 PLN02494 adenosylhomocysteinas 98.1 6.3E-05 1.4E-09 66.3 11.6 92 106-214 252-344 (477)
142 COG2518 Pcm Protein-L-isoaspar 98.0 7.3E-05 1.6E-09 58.6 10.4 112 89-212 54-170 (209)
143 TIGR00518 alaDH alanine dehydr 97.9 0.00013 2.9E-09 63.4 11.0 96 107-212 166-268 (370)
144 PRK08324 short chain dehydroge 97.9 0.00044 9.5E-09 65.4 14.5 141 62-213 385-559 (681)
145 PRK00045 hemA glutamyl-tRNA re 97.8 5.1E-05 1.1E-09 67.4 7.4 158 3-192 92-254 (423)
146 PRK12771 putative glutamate sy 97.8 2.4E-05 5.2E-10 72.2 4.7 81 104-192 133-234 (564)
147 PTZ00075 Adenosylhomocysteinas 97.7 0.00099 2.2E-08 59.1 13.4 93 105-214 251-344 (476)
148 TIGR02853 spore_dpaA dipicolin 97.7 0.00065 1.4E-08 57.0 11.8 99 107-219 150-248 (287)
149 TIGR00406 prmA ribosomal prote 97.7 0.00059 1.3E-08 57.4 11.1 127 73-213 127-261 (288)
150 PF01488 Shikimate_DH: Shikima 97.7 0.00029 6.2E-09 52.2 8.2 74 106-191 10-86 (135)
151 COG0300 DltE Short-chain dehyd 97.7 0.00052 1.1E-08 56.3 10.2 84 106-190 4-94 (265)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.0023 5.1E-08 52.0 14.3 105 107-213 4-137 (238)
153 COG4221 Short-chain alcohol de 97.7 0.0026 5.7E-08 51.0 13.5 82 107-190 5-91 (246)
154 COG3967 DltE Short-chain dehyd 97.6 0.00073 1.6E-08 52.5 9.5 84 107-191 4-89 (245)
155 COG2242 CobL Precorrin-6B meth 97.6 0.0016 3.5E-08 50.1 11.2 101 101-210 28-134 (187)
156 PRK00377 cbiT cobalt-precorrin 97.6 0.0015 3.3E-08 51.7 11.5 102 101-210 34-144 (198)
157 PRK05993 short chain dehydroge 97.6 0.0011 2.4E-08 55.5 11.3 82 107-190 3-86 (277)
158 KOG1205 Predicted dehydrogenas 97.4 0.0051 1.1E-07 51.0 13.1 114 107-222 11-160 (282)
159 PRK13943 protein-L-isoaspartat 97.4 0.0034 7.4E-08 53.5 11.7 103 99-210 72-179 (322)
160 PRK12742 oxidoreductase; Provi 97.3 0.0069 1.5E-07 49.2 12.6 78 107-190 5-85 (237)
161 KOG1209 1-Acyl dihydroxyaceton 97.3 0.0037 7.9E-08 49.0 9.7 113 106-220 5-147 (289)
162 PF01135 PCMT: Protein-L-isoas 97.3 0.0011 2.5E-08 52.7 7.1 106 95-210 60-171 (209)
163 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.011 2.4E-07 53.2 14.3 81 107-190 209-294 (450)
164 PRK13942 protein-L-isoaspartat 97.3 0.0085 1.8E-07 48.0 12.1 103 99-210 68-175 (212)
165 COG2264 PrmA Ribosomal protein 97.2 0.0057 1.2E-07 51.0 11.1 130 72-213 129-265 (300)
166 PRK14967 putative methyltransf 97.2 0.01 2.2E-07 48.0 12.4 99 100-210 29-158 (223)
167 PRK08017 oxidoreductase; Provi 97.2 0.0046 1E-07 50.9 10.6 80 109-190 3-84 (256)
168 PF01262 AlaDh_PNT_C: Alanine 97.2 0.0013 2.9E-08 50.6 6.8 100 107-211 19-139 (168)
169 PF02826 2-Hacid_dh_C: D-isome 97.2 0.0033 7.3E-08 48.9 9.1 91 106-213 34-129 (178)
170 PRK05693 short chain dehydroge 97.2 0.005 1.1E-07 51.4 10.8 79 109-190 2-82 (274)
171 PRK06182 short chain dehydroge 97.2 0.0063 1.4E-07 50.7 11.2 81 107-190 2-84 (273)
172 PRK06057 short chain dehydroge 97.2 0.0066 1.4E-07 50.0 11.0 81 107-190 6-89 (255)
173 TIGR02469 CbiT precorrin-6Y C5 97.1 0.017 3.6E-07 41.6 11.9 102 101-210 13-121 (124)
174 PRK06139 short chain dehydroge 97.1 0.0072 1.6E-07 52.0 11.3 82 107-190 6-94 (330)
175 PRK06949 short chain dehydroge 97.1 0.0088 1.9E-07 49.3 11.1 82 107-190 8-96 (258)
176 PRK07109 short chain dehydroge 97.1 0.024 5.3E-07 48.8 14.2 82 107-190 7-95 (334)
177 TIGR00080 pimt protein-L-isoas 97.1 0.013 2.9E-07 47.0 11.6 104 98-210 68-176 (215)
178 PRK08265 short chain dehydroge 97.0 0.029 6.2E-07 46.4 13.8 82 107-190 5-90 (261)
179 PRK12939 short chain dehydroge 97.0 0.032 6.9E-07 45.6 13.9 82 107-190 6-94 (250)
180 PF13460 NAD_binding_10: NADH( 97.0 0.03 6.6E-07 43.4 13.1 92 111-213 1-99 (183)
181 PF06325 PrmA: Ribosomal prote 97.0 0.0039 8.4E-08 52.3 8.2 135 64-214 120-262 (295)
182 PRK07814 short chain dehydroge 97.0 0.011 2.5E-07 48.9 11.1 82 107-190 9-97 (263)
183 PRK07060 short chain dehydroge 97.0 0.01 2.2E-07 48.5 10.5 78 107-190 8-87 (245)
184 COG3288 PntA NAD/NADP transhyd 97.0 0.0076 1.7E-07 49.9 9.2 130 107-237 163-310 (356)
185 PRK07806 short chain dehydroge 97.0 0.04 8.7E-07 45.0 13.9 104 107-212 5-135 (248)
186 PRK07825 short chain dehydroge 97.0 0.014 3.1E-07 48.6 11.4 81 108-190 5-88 (273)
187 TIGR00438 rrmJ cell division p 96.9 0.023 5E-07 44.6 11.7 101 103-211 28-146 (188)
188 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.016 3.4E-07 48.0 11.2 82 107-190 5-90 (263)
189 PRK08177 short chain dehydroge 96.9 0.011 2.4E-07 47.7 9.9 78 109-190 2-81 (225)
190 PRK05866 short chain dehydroge 96.9 0.018 4E-07 48.6 11.5 82 107-190 39-127 (293)
191 PRK05872 short chain dehydroge 96.9 0.018 3.8E-07 48.7 11.3 81 107-190 8-95 (296)
192 PRK06841 short chain dehydroge 96.9 0.017 3.7E-07 47.5 11.1 82 107-190 14-99 (255)
193 PF12847 Methyltransf_18: Meth 96.9 0.0066 1.4E-07 43.0 7.4 93 107-209 1-109 (112)
194 PRK06484 short chain dehydroge 96.9 0.043 9.3E-07 50.3 14.5 105 107-213 268-402 (520)
195 COG1748 LYS9 Saccharopine dehy 96.8 0.02 4.4E-07 49.7 11.3 98 109-214 2-102 (389)
196 PRK08217 fabG 3-ketoacyl-(acyl 96.8 0.024 5.2E-07 46.4 11.6 82 107-190 4-92 (253)
197 PRK07677 short chain dehydroge 96.8 0.017 3.6E-07 47.5 10.6 81 108-190 1-88 (252)
198 TIGR01832 kduD 2-deoxy-D-gluco 96.8 0.024 5.2E-07 46.4 11.5 82 107-190 4-90 (248)
199 PF00106 adh_short: short chai 96.8 0.011 2.4E-07 45.1 8.8 81 109-190 1-90 (167)
200 PRK12828 short chain dehydroge 96.8 0.017 3.7E-07 46.8 10.4 81 107-190 6-92 (239)
201 PRK06180 short chain dehydroge 96.8 0.022 4.7E-07 47.6 11.2 82 107-190 3-88 (277)
202 PRK13940 glutamyl-tRNA reducta 96.8 0.022 4.8E-07 50.4 11.5 75 107-193 180-255 (414)
203 PRK06500 short chain dehydroge 96.8 0.022 4.8E-07 46.5 11.0 82 107-190 5-90 (249)
204 PRK12829 short chain dehydroge 96.8 0.016 3.4E-07 47.9 10.2 83 106-190 9-96 (264)
205 COG2519 GCD14 tRNA(1-methylade 96.8 0.034 7.4E-07 45.0 11.4 104 100-212 87-196 (256)
206 PRK11705 cyclopropane fatty ac 96.8 0.019 4.2E-07 50.3 11.0 99 101-211 161-267 (383)
207 PRK07533 enoyl-(acyl carrier p 96.8 0.021 4.6E-07 47.2 10.9 82 107-190 9-98 (258)
208 COG2230 Cfa Cyclopropane fatty 96.8 0.031 6.7E-07 46.3 11.5 103 100-214 65-179 (283)
209 PRK06505 enoyl-(acyl carrier p 96.8 0.02 4.4E-07 47.7 10.7 82 107-190 6-95 (271)
210 PRK13944 protein-L-isoaspartat 96.8 0.044 9.5E-07 43.7 12.2 101 99-210 64-172 (205)
211 PRK05867 short chain dehydroge 96.8 0.021 4.6E-07 46.9 10.8 82 107-190 8-96 (253)
212 PLN03209 translocon at the inn 96.8 0.041 9E-07 50.3 13.1 44 103-147 75-119 (576)
213 PRK06196 oxidoreductase; Provi 96.7 0.017 3.7E-07 49.3 10.3 82 107-190 25-109 (315)
214 PRK07831 short chain dehydroge 96.7 0.027 5.8E-07 46.6 11.2 84 105-190 14-107 (262)
215 PF02353 CMAS: Mycolic acid cy 96.7 0.0045 9.7E-08 51.6 6.5 99 100-210 55-165 (273)
216 COG2227 UbiG 2-polyprenyl-3-me 96.7 0.02 4.3E-07 46.0 9.6 98 106-211 58-161 (243)
217 TIGR03325 BphB_TodD cis-2,3-di 96.7 0.028 6E-07 46.5 11.0 81 107-189 4-88 (262)
218 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.027 5.9E-07 46.0 10.9 82 107-190 4-91 (251)
219 PRK07062 short chain dehydroge 96.7 0.025 5.4E-07 46.8 10.7 82 107-190 7-97 (265)
220 COG0421 SpeE Spermidine syntha 96.7 0.026 5.7E-07 47.1 10.5 101 109-210 78-189 (282)
221 COG0686 Ald Alanine dehydrogen 96.7 0.011 2.4E-07 49.1 8.1 97 107-212 167-269 (371)
222 PRK07832 short chain dehydroge 96.7 0.1 2.3E-06 43.4 14.4 79 110-190 2-88 (272)
223 PF00670 AdoHcyase_NAD: S-aden 96.7 0.042 9.2E-07 41.6 10.6 95 104-215 19-114 (162)
224 TIGR02356 adenyl_thiF thiazole 96.7 0.053 1.1E-06 43.1 11.9 35 107-141 20-54 (202)
225 TIGR01470 cysG_Nterm siroheme 96.7 0.097 2.1E-06 41.7 13.3 93 107-212 8-101 (205)
226 PRK07774 short chain dehydroge 96.7 0.032 6.9E-07 45.7 11.1 82 107-190 5-93 (250)
227 PRK07523 gluconate 5-dehydroge 96.6 0.033 7.1E-07 45.8 11.0 82 107-190 9-97 (255)
228 PRK06603 enoyl-(acyl carrier p 96.6 0.029 6.3E-07 46.4 10.7 82 107-190 7-96 (260)
229 PRK07478 short chain dehydroge 96.6 0.034 7.4E-07 45.7 11.1 82 107-190 5-93 (254)
230 PRK08589 short chain dehydroge 96.6 0.032 6.9E-07 46.5 10.9 82 107-190 5-92 (272)
231 PRK06198 short chain dehydroge 96.6 0.031 6.6E-07 46.1 10.8 83 107-190 5-94 (260)
232 PRK06128 oxidoreductase; Provi 96.6 0.095 2.1E-06 44.4 13.9 82 107-190 54-144 (300)
233 PRK08862 short chain dehydroge 96.6 0.035 7.7E-07 44.9 10.7 82 107-189 4-92 (227)
234 PRK07574 formate dehydrogenase 96.6 0.055 1.2E-06 47.3 12.3 92 107-214 191-287 (385)
235 PRK06194 hypothetical protein; 96.6 0.04 8.7E-07 46.2 11.4 82 107-190 5-93 (287)
236 PRK07453 protochlorophyllide o 96.6 0.035 7.7E-07 47.5 11.2 81 107-189 5-92 (322)
237 PRK09072 short chain dehydroge 96.6 0.039 8.5E-07 45.6 11.1 81 107-190 4-90 (263)
238 COG2226 UbiE Methylase involve 96.6 0.046 1E-06 44.3 11.0 106 103-217 47-162 (238)
239 PRK07576 short chain dehydroge 96.6 0.042 9.2E-07 45.5 11.3 81 107-189 8-95 (264)
240 PRK12823 benD 1,6-dihydroxycyc 96.6 0.032 6.9E-07 46.0 10.5 82 107-190 7-94 (260)
241 PRK06463 fabG 3-ketoacyl-(acyl 96.6 0.038 8.3E-07 45.5 10.9 81 107-190 6-89 (255)
242 PRK08340 glucose-1-dehydrogena 96.5 0.044 9.4E-07 45.3 11.2 79 110-190 2-86 (259)
243 PRK08415 enoyl-(acyl carrier p 96.5 0.043 9.3E-07 45.9 11.2 105 107-213 4-145 (274)
244 PRK08226 short chain dehydroge 96.5 0.042 9.1E-07 45.4 11.1 82 107-190 5-92 (263)
245 PRK08643 acetoin reductase; Va 96.5 0.041 9E-07 45.2 11.0 81 108-190 2-89 (256)
246 PRK07502 cyclohexadienyl dehyd 96.5 0.048 1E-06 46.4 11.5 91 109-212 7-101 (307)
247 PRK08213 gluconate 5-dehydroge 96.5 0.045 9.8E-07 45.1 11.1 82 107-190 11-99 (259)
248 PRK08594 enoyl-(acyl carrier p 96.5 0.095 2.1E-06 43.3 13.0 81 107-189 6-96 (257)
249 PRK08628 short chain dehydroge 96.5 0.037 8E-07 45.6 10.6 82 107-190 6-93 (258)
250 PRK00811 spermidine synthase; 96.5 0.022 4.7E-07 47.9 9.2 100 105-211 74-191 (283)
251 PRK05854 short chain dehydroge 96.5 0.046 9.9E-07 46.7 11.4 82 107-190 13-103 (313)
252 PRK05717 oxidoreductase; Valid 96.5 0.046 1E-06 45.0 11.1 82 107-190 9-94 (255)
253 PRK07402 precorrin-6B methylas 96.5 0.1 2.2E-06 41.2 12.6 103 101-211 34-142 (196)
254 PRK08339 short chain dehydroge 96.5 0.044 9.6E-07 45.4 10.8 81 107-190 7-95 (263)
255 PRK12937 short chain dehydroge 96.5 0.15 3.2E-06 41.5 13.9 82 107-190 4-93 (245)
256 PRK12481 2-deoxy-D-gluconate 3 96.5 0.048 1E-06 44.8 11.0 82 107-190 7-93 (251)
257 PLN03139 formate dehydrogenase 96.5 0.078 1.7E-06 46.4 12.6 92 107-214 198-294 (386)
258 PRK08690 enoyl-(acyl carrier p 96.5 0.043 9.4E-07 45.4 10.7 82 107-190 5-94 (261)
259 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.011 2.4E-07 53.1 7.7 91 103-213 29-125 (450)
260 PF03435 Saccharop_dh: Sacchar 96.5 0.035 7.5E-07 48.9 10.6 93 111-210 1-97 (386)
261 PRK06079 enoyl-(acyl carrier p 96.5 0.046 9.9E-07 45.0 10.7 82 107-190 6-93 (252)
262 PRK07035 short chain dehydroge 96.5 0.052 1.1E-06 44.5 11.1 82 107-190 7-95 (252)
263 PRK07890 short chain dehydroge 96.5 0.049 1.1E-06 44.8 11.0 82 107-190 4-92 (258)
264 TIGR01809 Shik-DH-AROM shikima 96.5 0.017 3.7E-07 48.4 8.2 75 107-190 124-200 (282)
265 PRK06935 2-deoxy-D-gluconate 3 96.4 0.051 1.1E-06 44.8 11.0 82 107-190 14-101 (258)
266 PRK08703 short chain dehydroge 96.4 0.044 9.5E-07 44.6 10.5 83 107-190 5-97 (239)
267 PRK07454 short chain dehydroge 96.4 0.061 1.3E-06 43.8 11.4 83 106-190 4-93 (241)
268 PRK06138 short chain dehydroge 96.4 0.049 1.1E-06 44.6 10.9 82 107-190 4-91 (252)
269 PRK06172 short chain dehydroge 96.4 0.053 1.1E-06 44.5 11.0 82 107-190 6-94 (253)
270 PRK05875 short chain dehydroge 96.4 0.052 1.1E-06 45.2 11.2 82 107-190 6-96 (276)
271 PRK07063 short chain dehydroge 96.4 0.049 1.1E-06 44.9 10.9 82 107-190 6-96 (260)
272 PLN02253 xanthoxin dehydrogena 96.4 0.048 1E-06 45.5 10.9 82 107-190 17-104 (280)
273 PRK08267 short chain dehydroge 96.4 0.051 1.1E-06 44.8 10.9 81 109-190 2-87 (260)
274 PRK06953 short chain dehydroge 96.4 0.036 7.8E-07 44.6 9.8 77 109-190 2-80 (222)
275 PRK01581 speE spermidine synth 96.4 0.11 2.4E-06 44.8 12.8 100 104-211 147-268 (374)
276 PRK13394 3-hydroxybutyrate deh 96.4 0.053 1.1E-06 44.7 11.0 82 107-190 6-94 (262)
277 PRK07326 short chain dehydroge 96.4 0.055 1.2E-06 43.9 10.9 82 107-190 5-92 (237)
278 PRK08277 D-mannonate oxidoredu 96.4 0.054 1.2E-06 45.2 11.1 81 107-189 9-96 (278)
279 cd05311 NAD_bind_2_malic_enz N 96.4 0.14 3E-06 41.5 12.8 99 98-211 14-128 (226)
280 PRK00107 gidB 16S rRNA methylt 96.4 0.057 1.2E-06 42.3 10.3 97 105-211 43-145 (187)
281 CHL00194 ycf39 Ycf39; Provisio 96.4 0.08 1.7E-06 45.2 12.1 94 110-212 2-110 (317)
282 PRK12384 sorbitol-6-phosphate 96.4 0.058 1.3E-06 44.4 10.9 81 108-190 2-91 (259)
283 PRK08159 enoyl-(acyl carrier p 96.4 0.058 1.2E-06 45.0 10.9 83 106-190 8-98 (272)
284 PRK08642 fabG 3-ketoacyl-(acyl 96.4 0.044 9.4E-07 44.9 10.1 82 107-189 4-90 (253)
285 PRK08618 ornithine cyclodeamin 96.4 0.11 2.5E-06 44.5 12.9 99 101-214 120-224 (325)
286 PRK06483 dihydromonapterin red 96.4 0.064 1.4E-06 43.5 11.0 80 108-190 2-84 (236)
287 TIGR03206 benzo_BadH 2-hydroxy 96.4 0.064 1.4E-06 43.8 11.1 81 107-189 2-89 (250)
288 PRK08085 gluconate 5-dehydroge 96.4 0.063 1.4E-06 44.1 11.0 82 107-190 8-96 (254)
289 PRK00536 speE spermidine synth 96.4 0.022 4.7E-07 47.0 8.0 102 104-212 69-172 (262)
290 PRK04457 spermidine synthase; 96.3 0.091 2E-06 43.6 11.8 97 106-210 65-176 (262)
291 PRK07024 short chain dehydroge 96.3 0.073 1.6E-06 43.9 11.3 81 108-190 2-88 (257)
292 PLN02780 ketoreductase/ oxidor 96.3 0.041 8.9E-07 47.1 10.0 41 107-148 52-93 (320)
293 PRK06719 precorrin-2 dehydroge 96.3 0.15 3.3E-06 38.7 11.9 88 107-210 12-99 (157)
294 PRK09242 tropinone reductase; 96.3 0.076 1.7E-06 43.7 11.3 82 107-190 8-98 (257)
295 PRK12429 3-hydroxybutyrate deh 96.3 0.071 1.5E-06 43.8 11.1 82 107-190 3-91 (258)
296 PRK07856 short chain dehydroge 96.3 0.056 1.2E-06 44.4 10.4 78 107-190 5-85 (252)
297 PRK06398 aldose dehydrogenase; 96.3 0.036 7.7E-07 45.8 9.2 76 107-190 5-82 (258)
298 PRK03369 murD UDP-N-acetylmura 96.3 0.035 7.6E-07 50.5 9.9 73 105-191 9-81 (488)
299 PRK06197 short chain dehydroge 96.3 0.061 1.3E-06 45.6 10.8 82 107-190 15-105 (306)
300 PRK04148 hypothetical protein; 96.3 0.28 6.2E-06 35.9 13.6 95 105-211 14-109 (134)
301 PRK09186 flagellin modificatio 96.3 0.077 1.7E-06 43.6 11.1 81 107-189 3-92 (256)
302 PRK05876 short chain dehydroge 96.3 0.073 1.6E-06 44.5 11.0 82 107-190 5-93 (275)
303 PRK07984 enoyl-(acyl carrier p 96.3 0.068 1.5E-06 44.3 10.8 81 107-189 5-93 (262)
304 KOG1201 Hydroxysteroid 17-beta 96.2 0.077 1.7E-06 44.1 10.6 81 107-190 37-124 (300)
305 PRK08993 2-deoxy-D-gluconate 3 96.2 0.078 1.7E-06 43.6 10.9 82 107-190 9-95 (253)
306 PRK06181 short chain dehydroge 96.2 0.091 2E-06 43.4 11.4 81 108-190 1-88 (263)
307 PF13241 NAD_binding_7: Putati 96.2 0.077 1.7E-06 37.1 9.3 88 107-213 6-93 (103)
308 PRK12743 oxidoreductase; Provi 96.2 0.072 1.6E-06 43.9 10.7 81 108-190 2-90 (256)
309 PRK07904 short chain dehydroge 96.2 0.076 1.7E-06 43.7 10.8 83 105-190 5-97 (253)
310 PRK07067 sorbitol dehydrogenas 96.2 0.085 1.8E-06 43.4 11.1 82 107-190 5-90 (257)
311 PRK06482 short chain dehydroge 96.2 0.085 1.8E-06 43.9 11.2 80 109-190 3-86 (276)
312 PRK06114 short chain dehydroge 96.2 0.087 1.9E-06 43.3 11.1 82 107-190 7-96 (254)
313 PRK07985 oxidoreductase; Provi 96.2 0.19 4.1E-06 42.4 13.4 82 107-190 48-138 (294)
314 PLN02366 spermidine synthase 96.2 0.057 1.2E-06 45.8 10.0 101 105-211 89-206 (308)
315 PRK06720 hypothetical protein; 96.2 0.14 2.9E-06 39.5 11.4 82 107-190 15-103 (169)
316 PRK08251 short chain dehydroge 96.2 0.097 2.1E-06 42.8 11.3 81 108-190 2-91 (248)
317 PRK12549 shikimate 5-dehydroge 96.2 0.045 9.7E-07 46.0 9.3 43 106-148 125-167 (284)
318 KOG0725 Reductases with broad 96.2 0.089 1.9E-06 43.8 11.0 84 106-190 6-99 (270)
319 PLN02823 spermine synthase 96.2 0.082 1.8E-06 45.4 10.9 99 106-210 102-219 (336)
320 PRK13656 trans-2-enoyl-CoA red 96.2 0.16 3.4E-06 44.3 12.5 83 106-191 39-142 (398)
321 PRK08263 short chain dehydroge 96.2 0.095 2.1E-06 43.7 11.2 81 108-190 3-87 (275)
322 PRK13243 glyoxylate reductase; 96.2 0.15 3.3E-06 43.9 12.5 90 107-214 149-243 (333)
323 PRK06179 short chain dehydroge 96.1 0.062 1.3E-06 44.6 10.0 79 107-190 3-83 (270)
324 PRK06113 7-alpha-hydroxysteroi 96.1 0.1 2.2E-06 42.9 11.1 82 107-190 10-98 (255)
325 PRK06914 short chain dehydroge 96.1 0.087 1.9E-06 44.0 10.9 80 108-190 3-91 (280)
326 PF08704 GCD14: tRNA methyltra 96.1 0.023 4.9E-07 46.5 6.9 108 100-212 33-147 (247)
327 PRK12936 3-ketoacyl-(acyl-carr 96.1 0.11 2.3E-06 42.3 11.2 82 107-190 5-90 (245)
328 TIGR00417 speE spermidine synt 96.1 0.067 1.5E-06 44.6 10.0 100 105-211 70-186 (270)
329 PRK06523 short chain dehydroge 96.1 0.068 1.5E-06 44.0 10.0 76 107-189 8-86 (260)
330 PRK08063 enoyl-(acyl carrier p 96.1 0.084 1.8E-06 43.2 10.4 83 107-190 3-92 (250)
331 PRK06077 fabG 3-ketoacyl-(acyl 96.1 0.4 8.6E-06 39.1 14.5 105 108-213 6-142 (252)
332 COG0169 AroE Shikimate 5-dehyd 96.1 0.026 5.5E-07 47.1 7.2 46 107-152 125-171 (283)
333 PRK12747 short chain dehydroge 96.1 0.3 6.4E-06 40.0 13.6 107 107-214 3-147 (252)
334 PRK08416 7-alpha-hydroxysteroi 96.1 0.1 2.2E-06 43.1 10.9 81 107-189 7-96 (260)
335 PRK08264 short chain dehydroge 96.1 0.047 1E-06 44.3 8.7 77 107-190 5-83 (238)
336 PLN02928 oxidoreductase family 96.0 0.18 4E-06 43.6 12.6 98 107-214 158-265 (347)
337 cd01065 NAD_bind_Shikimate_DH 96.0 0.074 1.6E-06 40.1 9.1 96 106-212 17-117 (155)
338 KOG1252 Cystathionine beta-syn 96.0 0.31 6.6E-06 41.2 13.0 61 96-157 87-155 (362)
339 PRK06124 gluconate 5-dehydroge 96.0 0.14 3.1E-06 42.0 11.5 82 107-190 10-98 (256)
340 PRK07688 thiamine/molybdopteri 96.0 0.15 3.2E-06 44.0 11.8 35 107-141 23-57 (339)
341 PRK07097 gluconate 5-dehydroge 96.0 0.13 2.8E-06 42.6 11.2 82 107-190 9-97 (265)
342 PRK04266 fibrillarin; Provisio 96.0 0.39 8.4E-06 38.9 13.4 102 101-210 66-175 (226)
343 PRK08317 hypothetical protein; 96.0 0.19 4.2E-06 40.7 12.0 100 101-211 13-124 (241)
344 PRK06718 precorrin-2 dehydroge 95.9 0.35 7.7E-06 38.4 12.9 90 107-211 9-100 (202)
345 PRK07775 short chain dehydroge 95.9 0.14 2.9E-06 42.8 11.1 82 107-190 9-97 (274)
346 PRK09134 short chain dehydroge 95.9 0.13 2.8E-06 42.4 10.9 82 107-190 8-97 (258)
347 PRK09291 short chain dehydroge 95.9 0.026 5.6E-07 46.4 6.7 76 108-190 2-83 (257)
348 PRK08644 thiamine biosynthesis 95.9 0.2 4.3E-06 40.1 11.3 35 107-141 27-61 (212)
349 PRK08303 short chain dehydroge 95.9 0.15 3.2E-06 43.4 11.3 81 107-189 7-105 (305)
350 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.14 3.1E-06 41.7 11.0 82 107-190 5-93 (251)
351 PRK05884 short chain dehydroge 95.9 0.1 2.2E-06 42.1 9.9 75 110-189 2-78 (223)
352 TIGR01963 PHB_DH 3-hydroxybuty 95.9 0.13 2.9E-06 42.0 10.8 81 108-190 1-88 (255)
353 PRK06484 short chain dehydroge 95.9 0.091 2E-06 48.2 10.7 82 107-190 4-89 (520)
354 PRK07074 short chain dehydroge 95.9 0.15 3.4E-06 41.8 11.2 81 108-190 2-87 (257)
355 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.16 3.5E-06 41.2 11.2 82 107-190 4-92 (246)
356 PRK07666 fabG 3-ketoacyl-(acyl 95.9 0.16 3.4E-06 41.3 11.0 82 107-190 6-94 (239)
357 PRK12475 thiamine/molybdopteri 95.9 0.19 4.2E-06 43.3 11.8 36 107-142 23-58 (338)
358 PRK08945 putative oxoacyl-(acy 95.9 0.17 3.7E-06 41.3 11.2 84 105-190 9-102 (247)
359 PRK15469 ghrA bifunctional gly 95.9 0.2 4.3E-06 42.7 11.8 90 107-214 135-229 (312)
360 PRK06101 short chain dehydroge 95.9 0.11 2.3E-06 42.4 10.0 41 109-150 2-43 (240)
361 PRK06997 enoyl-(acyl carrier p 95.8 0.13 2.9E-06 42.5 10.6 82 107-190 5-94 (260)
362 PRK00312 pcm protein-L-isoaspa 95.8 0.5 1.1E-05 37.7 13.6 102 99-211 70-175 (212)
363 PRK05650 short chain dehydroge 95.8 0.16 3.5E-06 42.1 11.1 79 110-190 2-87 (270)
364 PRK10538 malonic semialdehyde 95.8 0.17 3.7E-06 41.4 11.0 79 110-190 2-84 (248)
365 PRK12367 short chain dehydroge 95.8 0.096 2.1E-06 43.0 9.4 75 107-190 13-89 (245)
366 PRK07791 short chain dehydroge 95.8 0.14 3.1E-06 43.0 10.7 83 106-190 4-102 (286)
367 COG1052 LdhA Lactate dehydroge 95.8 0.29 6.3E-06 41.9 12.5 90 107-214 145-239 (324)
368 cd01078 NAD_bind_H4MPT_DH NADP 95.8 0.23 4.9E-06 39.1 11.3 76 107-191 27-108 (194)
369 COG0373 HemA Glutamyl-tRNA red 95.7 0.14 3.1E-06 44.9 10.6 73 107-192 177-250 (414)
370 TIGR02355 moeB molybdopterin s 95.7 0.19 4.2E-06 41.1 10.8 34 108-141 24-57 (240)
371 cd01483 E1_enzyme_family Super 95.7 0.35 7.6E-06 35.9 11.5 32 110-141 1-32 (143)
372 PRK08936 glucose-1-dehydrogena 95.7 0.17 3.7E-06 41.7 10.8 82 107-190 6-95 (261)
373 TIGR01289 LPOR light-dependent 95.7 0.17 3.7E-06 43.1 11.1 81 108-190 3-91 (314)
374 PRK06125 short chain dehydroge 95.7 0.18 3.9E-06 41.5 10.9 79 107-190 6-91 (259)
375 PRK07424 bifunctional sterol d 95.7 0.12 2.7E-06 45.6 10.2 76 107-190 177-255 (406)
376 PRK09730 putative NAD(P)-bindi 95.7 0.15 3.2E-06 41.5 10.2 81 109-190 2-89 (247)
377 PRK12935 acetoacetyl-CoA reduc 95.7 0.17 3.7E-06 41.3 10.5 82 107-190 5-94 (247)
378 PRK06947 glucose-1-dehydrogena 95.7 0.15 3.3E-06 41.6 10.2 81 109-190 3-90 (248)
379 COG1086 Predicted nucleoside-d 95.6 0.12 2.5E-06 46.9 9.8 81 107-190 249-335 (588)
380 PTZ00098 phosphoethanolamine N 95.6 0.31 6.7E-06 40.5 11.9 106 98-212 43-157 (263)
381 PRK14103 trans-aconitate 2-met 95.6 0.29 6.2E-06 40.4 11.7 97 100-210 22-125 (255)
382 PRK09135 pteridine reductase; 95.6 0.22 4.8E-06 40.5 11.0 82 107-190 5-95 (249)
383 PLN02781 Probable caffeoyl-CoA 95.6 0.29 6.2E-06 39.9 11.4 105 103-210 64-177 (234)
384 COG4122 Predicted O-methyltran 95.6 0.56 1.2E-05 37.6 12.6 103 103-211 55-166 (219)
385 PRK05562 precorrin-2 dehydroge 95.6 0.83 1.8E-05 36.8 13.6 91 107-211 24-116 (223)
386 cd01487 E1_ThiF_like E1_ThiF_l 95.6 0.24 5.3E-06 38.3 10.4 33 110-142 1-33 (174)
387 PLN02233 ubiquinone biosynthes 95.6 0.41 8.9E-06 39.7 12.4 101 103-214 69-185 (261)
388 PRK03612 spermidine synthase; 95.6 0.2 4.2E-06 46.0 11.4 99 105-211 295-415 (521)
389 KOG1014 17 beta-hydroxysteroid 95.6 0.14 3E-06 42.8 9.3 80 107-190 48-136 (312)
390 PRK07577 short chain dehydroge 95.5 0.12 2.5E-06 41.8 9.0 74 108-190 3-78 (234)
391 PRK05557 fabG 3-ketoacyl-(acyl 95.5 0.22 4.7E-06 40.5 10.7 82 107-190 4-93 (248)
392 PRK11207 tellurite resistance 95.5 0.1 2.3E-06 41.2 8.5 97 103-211 26-134 (197)
393 PRK12825 fabG 3-ketoacyl-(acyl 95.5 0.22 4.8E-06 40.4 10.8 81 108-189 6-93 (249)
394 PRK08220 2,3-dihydroxybenzoate 95.5 0.18 3.9E-06 41.2 10.3 77 107-190 7-86 (252)
395 PRK06171 sorbitol-6-phosphate 95.5 0.11 2.4E-06 43.0 9.0 78 107-190 8-87 (266)
396 PRK12548 shikimate 5-dehydroge 95.5 0.1 2.2E-06 44.0 8.7 36 107-142 125-160 (289)
397 KOG1200 Mitochondrial/plastidi 95.5 0.21 4.5E-06 38.9 9.4 81 109-191 15-101 (256)
398 PRK07370 enoyl-(acyl carrier p 95.5 0.19 4.1E-06 41.5 10.3 82 107-190 5-97 (258)
399 PLN02244 tocopherol O-methyltr 95.5 0.39 8.4E-06 41.5 12.4 98 106-212 117-224 (340)
400 TIGR02354 thiF_fam2 thiamine b 95.5 0.42 9.2E-06 37.9 11.7 35 107-141 20-54 (200)
401 PRK07889 enoyl-(acyl carrier p 95.5 0.24 5.3E-06 40.8 10.8 82 107-190 6-95 (256)
402 PRK12938 acetyacetyl-CoA reduc 95.5 0.24 5.2E-06 40.4 10.7 81 108-190 3-91 (246)
403 PLN03075 nicotianamine synthas 95.5 0.13 2.8E-06 43.1 9.1 99 106-211 122-233 (296)
404 PRK08328 hypothetical protein; 95.5 0.27 5.8E-06 40.0 10.7 35 107-141 26-60 (231)
405 PRK05597 molybdopterin biosynt 95.5 0.26 5.5E-06 42.9 11.2 36 107-142 27-62 (355)
406 PRK05565 fabG 3-ketoacyl-(acyl 95.5 0.24 5.1E-06 40.3 10.7 81 108-190 5-93 (247)
407 PRK06701 short chain dehydroge 95.5 0.27 6E-06 41.4 11.3 83 106-190 44-134 (290)
408 PRK05690 molybdopterin biosynt 95.5 0.29 6.3E-06 40.1 11.0 35 107-141 31-65 (245)
409 PRK07340 ornithine cyclodeamin 95.5 0.24 5.1E-06 42.1 10.8 98 105-215 122-221 (304)
410 COG0031 CysK Cysteine synthase 95.5 0.37 8.1E-06 40.4 11.6 58 101-158 55-114 (300)
411 PRK11036 putative S-adenosyl-L 95.5 0.1 2.2E-06 43.1 8.4 96 106-211 43-149 (255)
412 PRK05855 short chain dehydroge 95.5 0.18 4E-06 46.7 11.1 82 107-190 314-402 (582)
413 COG0623 FabI Enoyl-[acyl-carri 95.4 0.55 1.2E-05 37.6 11.8 108 106-215 4-148 (259)
414 PRK12744 short chain dehydroge 95.4 0.19 4.2E-06 41.3 10.1 82 107-190 7-99 (257)
415 TIGR02415 23BDH acetoin reduct 95.4 0.28 6.1E-06 40.1 11.0 80 109-190 1-87 (254)
416 PRK12749 quinate/shikimate deh 95.4 0.17 3.8E-06 42.5 9.8 36 107-142 123-158 (288)
417 PRK08278 short chain dehydroge 95.4 0.24 5.3E-06 41.2 10.8 82 107-190 5-100 (273)
418 PF01209 Ubie_methyltran: ubiE 95.4 0.077 1.7E-06 43.2 7.4 105 102-215 42-157 (233)
419 TIGR00138 gidB 16S rRNA methyl 95.4 0.17 3.6E-06 39.5 8.9 94 107-210 42-141 (181)
420 PF02254 TrkA_N: TrkA-N domain 95.4 0.63 1.4E-05 33.0 12.3 92 111-210 1-95 (116)
421 TIGR03840 TMPT_Se_Te thiopurin 95.4 0.42 9.2E-06 38.3 11.4 104 106-212 33-153 (213)
422 cd00757 ThiF_MoeB_HesA_family 95.3 0.4 8.7E-06 38.9 11.4 33 108-140 21-53 (228)
423 PRK08287 cobalt-precorrin-6Y C 95.3 0.58 1.3E-05 36.5 12.0 99 101-210 25-130 (187)
424 TIGR01829 AcAcCoA_reduct aceto 95.3 0.16 3.4E-06 41.2 9.1 80 109-190 1-88 (242)
425 PF00899 ThiF: ThiF family; I 95.3 0.2 4.4E-06 36.8 8.9 95 108-209 2-121 (135)
426 TIGR00446 nop2p NOL1/NOP2/sun 95.3 1.1 2.3E-05 37.3 14.0 99 103-210 67-198 (264)
427 PLN02476 O-methyltransferase 95.3 0.54 1.2E-05 39.2 12.0 105 103-210 114-227 (278)
428 PF03446 NAD_binding_2: NAD bi 95.3 0.64 1.4E-05 35.4 11.8 91 109-215 2-98 (163)
429 PRK14175 bifunctional 5,10-met 95.3 0.28 6E-06 41.0 10.3 83 99-213 148-232 (286)
430 TIGR02632 RhaD_aldol-ADH rhamn 95.3 0.24 5.2E-06 47.0 11.2 82 107-190 413-503 (676)
431 PRK07102 short chain dehydroge 95.3 0.24 5.2E-06 40.3 10.1 78 109-190 2-86 (243)
432 PRK06940 short chain dehydroge 95.2 0.3 6.6E-06 40.7 10.8 79 108-190 2-86 (275)
433 TIGR01318 gltD_gamma_fam gluta 95.2 0.14 3E-06 46.3 9.3 77 107-191 140-237 (467)
434 PRK06123 short chain dehydroge 95.2 0.28 6.2E-06 39.9 10.5 81 108-190 2-90 (248)
435 PRK08762 molybdopterin biosynt 95.2 0.31 6.7E-06 42.8 11.1 35 107-141 134-168 (376)
436 PF01113 DapB_N: Dihydrodipico 95.2 0.7 1.5E-05 33.5 11.3 92 110-214 2-100 (124)
437 TIGR03215 ac_ald_DH_ac acetald 95.2 0.47 1E-05 39.7 11.6 89 110-210 3-94 (285)
438 COG2910 Putative NADH-flavin r 95.2 0.23 5.1E-06 38.3 8.7 93 110-213 2-106 (211)
439 PRK12550 shikimate 5-dehydroge 95.2 0.13 2.9E-06 42.8 8.2 75 99-190 113-188 (272)
440 PRK12809 putative oxidoreducta 95.2 0.15 3.3E-06 48.1 9.5 77 107-191 309-406 (639)
441 PLN02657 3,8-divinyl protochlo 95.1 0.29 6.3E-06 43.2 10.7 83 104-190 56-146 (390)
442 cd01080 NAD_bind_m-THF_DH_Cycl 95.1 0.45 9.7E-06 36.5 10.3 77 105-213 41-118 (168)
443 PRK05599 hypothetical protein; 95.1 0.36 7.8E-06 39.5 10.7 78 110-190 2-87 (246)
444 PRK12746 short chain dehydroge 95.1 0.31 6.6E-06 39.9 10.3 84 107-190 5-100 (254)
445 PRK01683 trans-aconitate 2-met 95.1 0.81 1.8E-05 37.7 12.8 100 100-211 24-130 (258)
446 cd00755 YgdL_like Family of ac 95.1 1.5 3.2E-05 35.6 14.2 34 108-141 11-44 (231)
447 PRK06932 glycerate dehydrogena 95.1 0.59 1.3E-05 39.9 12.0 86 107-214 146-236 (314)
448 PRK07792 fabG 3-ketoacyl-(acyl 95.1 0.31 6.7E-06 41.4 10.4 81 107-190 11-99 (306)
449 PRK15116 sulfur acceptor prote 95.1 1.1 2.4E-05 37.2 13.1 35 107-141 29-63 (268)
450 PRK08300 acetaldehyde dehydrog 95.0 0.39 8.5E-06 40.5 10.6 94 109-211 5-101 (302)
451 TIGR02752 MenG_heptapren 2-hep 95.0 0.7 1.5E-05 37.4 12.1 103 101-212 39-152 (231)
452 PRK12480 D-lactate dehydrogena 95.0 0.9 1.9E-05 39.1 13.1 88 107-214 145-237 (330)
453 cd01492 Aos1_SUMO Ubiquitin ac 95.0 0.41 8.9E-06 37.8 10.3 35 107-141 20-54 (197)
454 PRK06436 glycerate dehydrogena 95.0 0.49 1.1E-05 40.1 11.3 87 107-214 121-212 (303)
455 TIGR01532 E4PD_g-proteo D-eryt 95.0 0.4 8.6E-06 41.1 10.7 98 110-213 1-122 (325)
456 KOG0069 Glyoxylate/hydroxypyru 95.0 0.64 1.4E-05 39.7 11.7 91 107-214 161-256 (336)
457 PRK12745 3-ketoacyl-(acyl-carr 94.9 0.4 8.7E-06 39.3 10.6 80 109-190 3-90 (256)
458 PLN00141 Tic62-NAD(P)-related 94.9 0.19 4.1E-06 41.3 8.4 100 107-212 16-132 (251)
459 PLN00203 glutamyl-tRNA reducta 94.9 0.26 5.7E-06 45.0 9.8 75 108-192 266-341 (519)
460 KOG1207 Diacetyl reductase/L-x 94.8 0.15 3.3E-06 38.9 6.8 81 107-190 6-87 (245)
461 PRK07069 short chain dehydroge 94.8 0.35 7.5E-06 39.5 9.9 79 110-190 1-89 (251)
462 PF01118 Semialdhyde_dh: Semia 94.8 0.24 5.2E-06 35.7 7.8 92 110-213 1-99 (121)
463 PRK15409 bifunctional glyoxyla 94.8 0.83 1.8E-05 39.2 12.2 90 107-214 144-239 (323)
464 TIGR00477 tehB tellurite resis 94.8 0.28 6E-06 38.7 8.8 95 104-211 27-133 (195)
465 PRK12827 short chain dehydroge 94.8 0.4 8.7E-06 39.0 10.1 82 107-190 5-97 (249)
466 PRK12824 acetoacetyl-CoA reduc 94.7 0.57 1.2E-05 38.0 10.9 80 109-190 3-90 (245)
467 PF02670 DXP_reductoisom: 1-de 94.7 1.2 2.5E-05 32.5 11.8 93 111-207 1-117 (129)
468 PRK07201 short chain dehydroge 94.7 0.4 8.6E-06 45.4 11.1 81 108-190 371-458 (657)
469 PRK10669 putative cation:proto 94.7 0.33 7.1E-06 45.1 10.2 75 109-191 418-492 (558)
470 PRK14192 bifunctional 5,10-met 94.7 0.21 4.6E-06 41.8 8.1 77 105-213 156-233 (283)
471 PRK08410 2-hydroxyacid dehydro 94.7 0.46 9.9E-06 40.5 10.3 87 107-214 144-235 (311)
472 PRK13581 D-3-phosphoglycerate 94.6 0.68 1.5E-05 42.6 12.0 90 107-214 139-233 (526)
473 PF01596 Methyltransf_3: O-met 94.6 0.4 8.7E-06 38.1 9.3 106 103-211 41-155 (205)
474 TIGR00507 aroE shikimate 5-deh 94.6 0.7 1.5E-05 38.5 11.3 95 106-213 115-216 (270)
475 KOG1208 Dehydrogenases with di 94.6 0.53 1.1E-05 40.1 10.5 83 106-190 33-124 (314)
476 PRK12769 putative oxidoreducta 94.6 0.21 4.5E-06 47.3 9.0 77 106-190 325-422 (654)
477 PRK10258 biotin biosynthesis p 94.6 2.1 4.6E-05 35.1 15.8 96 104-212 39-141 (251)
478 KOG2017 Molybdopterin synthase 94.6 0.077 1.7E-06 44.8 5.3 29 107-135 65-93 (427)
479 PRK12748 3-ketoacyl-(acyl-carr 94.5 0.54 1.2E-05 38.6 10.4 82 107-190 4-105 (256)
480 COG0111 SerA Phosphoglycerate 94.5 0.61 1.3E-05 39.9 10.6 90 108-214 142-236 (324)
481 KOG4022 Dihydropteridine reduc 94.5 0.33 7.2E-06 36.6 7.7 96 108-212 3-130 (236)
482 cd01075 NAD_bind_Leu_Phe_Val_D 94.5 0.17 3.7E-06 40.1 6.8 80 107-202 27-107 (200)
483 TIGR02685 pter_reduc_Leis pter 94.4 0.52 1.1E-05 39.0 10.2 81 109-190 2-94 (267)
484 PF05368 NmrA: NmrA-like famil 94.4 0.31 6.8E-06 39.4 8.6 70 111-189 1-73 (233)
485 PRK08219 short chain dehydroge 94.4 0.46 1E-05 38.0 9.5 76 109-190 4-81 (227)
486 PRK05600 thiamine biosynthesis 94.4 0.83 1.8E-05 40.0 11.5 35 107-141 40-74 (370)
487 PF08659 KR: KR domain; Inter 94.4 0.4 8.6E-06 37.3 8.7 32 110-141 2-34 (181)
488 PF01408 GFO_IDH_MocA: Oxidore 94.4 1.3 2.7E-05 31.6 11.6 87 110-210 2-91 (120)
489 PRK00121 trmB tRNA (guanine-N( 94.3 0.95 2.1E-05 35.9 10.9 99 107-211 40-156 (202)
490 PRK14982 acyl-ACP reductase; P 94.3 0.27 5.9E-06 42.2 8.2 93 106-213 153-248 (340)
491 PRK03562 glutathione-regulated 94.3 0.51 1.1E-05 44.3 10.7 93 108-208 400-495 (621)
492 PF08241 Methyltransf_11: Meth 94.3 0.41 9E-06 32.2 7.9 84 114-209 3-95 (95)
493 TIGR00563 rsmB ribosomal RNA s 94.3 1.3 2.9E-05 39.5 13.0 102 102-210 233-367 (426)
494 COG0569 TrkA K+ transport syst 94.3 0.56 1.2E-05 37.9 9.6 74 110-191 2-77 (225)
495 KOG1502 Flavonol reductase/cin 94.3 0.35 7.6E-06 41.1 8.5 78 107-190 5-88 (327)
496 PLN02986 cinnamyl-alcohol dehy 94.3 0.36 7.8E-06 41.2 9.0 37 107-144 4-41 (322)
497 TIGR00715 precor6x_red precorr 94.3 0.22 4.7E-06 41.1 7.2 74 110-190 2-75 (256)
498 PF03807 F420_oxidored: NADP o 94.2 1.2 2.5E-05 30.4 11.9 85 110-210 1-93 (96)
499 PRK11188 rrmJ 23S rRNA methylt 94.2 1.2 2.6E-05 35.6 11.2 99 105-211 49-165 (209)
500 PRK08309 short chain dehydroge 94.2 2 4.4E-05 33.3 12.1 93 110-205 2-99 (177)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-54 Score=347.32 Aligned_cols=285 Identities=54% Similarity=0.932 Sum_probs=261.7
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
|++|||.+|+|+++|++|+++++||||++.|..+|+.|+.|..|+.|+|+++.+.+.+..+|++++|++.+++.++++|+
T Consensus 63 mvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd 142 (354)
T KOG0024|consen 63 MVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPD 142 (354)
T ss_pred cccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
++|++++|+++++++++|+.+++.+++|+++||+|+|++|+.+...||++|+.+|+.++..+.|+++++++|++.+.+..
T Consensus 143 ~vs~eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~ 222 (354)
T KOG0024|consen 143 NVSFEEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSS 222 (354)
T ss_pred CCchhhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887643
Q ss_pred CCcccHHHHHHHHHH-H-hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 161 TNLQDIAEEVEKIQK-A-MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
... ..+.+++..+ . +...+|+.|||+|....++.++..++.+|++++.|+.....+++......|++++.|++.+
T Consensus 223 ~~~--~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~ 300 (354)
T KOG0024|consen 223 HKS--SPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYC 300 (354)
T ss_pred ccc--cHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeec
Confidence 322 1222332222 1 3356999999999988999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEe
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN 289 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~ 289 (290)
...+..+++++++|++++++++++.|++ +++.+|++.+..++. ..|++++
T Consensus 301 ~~~y~~ai~li~sGki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 301 NGDYPTAIELVSSGKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred cccHHHHHHHHHcCCcCchhheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence 5599999999999999999999999999 999999999887743 6688876
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.4e-52 Score=345.52 Aligned_cols=274 Identities=30% Similarity=0.501 Sum_probs=248.0
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 79 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P 79 (290)
+|||||.+|+|+++|++|++|++||||.+ -...+|++|.+|..|++++|++....+. +++|+|+||+++++++++++|
T Consensus 59 ~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP 137 (339)
T COG1064 59 LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIP 137 (339)
T ss_pred ccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECC
Confidence 58999999999999999999999999998 7888999999999999999999888876 589999999999999999999
Q ss_pred CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++++..||++ ....|+|++++...++||++|+|.|.|++|++++|+|+++|+ .|++++++++|.+++++||++++++
T Consensus 138 ~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 138 EGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 99999999988 477789999999999999999999999999999999999998 6999999999999999999999987
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CC-ccccchhhhccCcEEEEeee
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFR 236 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~ 236 (290)
.. ++++.+.+++ .+|++||+++ +..+..+++.|+++|+++.+|... .. ..++...+.++++++.|+..
T Consensus 217 ~~--~~~~~~~~~~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~ 286 (339)
T COG1064 217 SS--DSDALEAVKE-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLV 286 (339)
T ss_pred cC--CchhhHHhHh-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEec
Confidence 43 5565555543 2999999999 799999999999999999999774 33 45777778999999999988
Q ss_pred c-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 237 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 237 ~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
. +.++++++++..+|++ ++.+.+.+++ +++++|+++|++++..++.||++
T Consensus 287 g~~~d~~e~l~f~~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 287 GTRADLEEALDFAAEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred CCHHHHHHHHHHHHhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence 7 8899999999999999 5555457788 99999999999999999999874
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=9.8e-47 Score=325.03 Aligned_cols=279 Identities=31% Similarity=0.540 Sum_probs=243.6
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceE
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCF 76 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~ 76 (290)
+++|||++|+|+++ ++++|++||+|...+..+|++|.+|..+++++|++...+|.. ..+|+|+||++++++.++
T Consensus 61 ~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~ 138 (343)
T PRK09880 61 MVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCI 138 (343)
T ss_pred cccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeE
Confidence 47999999999999 788999999999999999999999999999999988766531 247999999999999999
Q ss_pred ECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 77 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 77 ~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
++|+++++++++...+++++|+++......++++|||+|+|++|++++|+|+++|++.++++++++++.++++++|++.+
T Consensus 139 ~~P~~l~~~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v 218 (343)
T PRK09880 139 PYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL 218 (343)
T ss_pred ECCCCCCHHHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE
Confidence 99999999888877788999999987667789999999999999999999999999778899999999999999999998
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeee
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 236 (290)
++++. +++.+ +... .+++|++||++|.+..+..+++.++++|+++.+|.......++...++.+++++.+.+.
T Consensus 219 i~~~~--~~~~~----~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~ 291 (343)
T PRK09880 219 VNPQN--DDLDH----YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFR 291 (343)
T ss_pred ecCCc--ccHHH----Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEee
Confidence 87542 33322 2222 23699999999987788999999999999999997554446666677889999999887
Q ss_pred cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 237 ~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.++++++++++++|++++.+.++++|++ +|+++|++.+.+++..+|++|++
T Consensus 292 ~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 292 FTEEFNTAVSWLANGVINPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ccccHHHHHHHHHcCCCCchhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 77789999999999999877888999999 99999999999887789999975
No 4
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.4e-44 Score=311.57 Aligned_cols=280 Identities=33% Similarity=0.574 Sum_probs=241.8
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc-ccCCCCCcccceeEeecCCceEECC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-FATPPVHGSLANQVVHPADLCFKLP 79 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~e~~~v~~~~~~~~P 79 (290)
.++|||++|+|+++|+++++|++||+|+..+..+|++|++|+.+++++|..... +| ...+|+|+||+.+++++++++|
T Consensus 56 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P 134 (339)
T cd08239 56 VIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLP 134 (339)
T ss_pred ceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECC
Confidence 368999999999999999999999999999999999999999999999997754 33 3467999999999999999999
Q ss_pred CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++++.+|+.+ .++.|||++++...++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++
T Consensus 135 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~ 214 (339)
T cd08239 135 DDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVIN 214 (339)
T ss_pred CCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEc
Confidence 99999999977 48889999998888899999999999999999999999999965888999999999999999998887
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~ 237 (290)
++ .++ .+.+.++ +.+.++|++||++|++..+..++++++++|+++.+|..... .+.. ..++.+++++.+.+..
T Consensus 215 ~~--~~~-~~~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~ 288 (339)
T cd08239 215 SG--QDD-VQEIREL--TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYF 288 (339)
T ss_pred CC--cch-HHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecC
Confidence 53 233 4455444 24568999999999876778899999999999999965432 2332 3467789999998876
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.++++++++++.+|.+++.+.++++|++ +++++|++.++++. .+|+|++|
T Consensus 289 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 289 SVPDMEECAEFLARHKLEVDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred CHHHHHHHHHHHHcCCCChhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence 5789999999999999888889999999 99999999998874 79999986
No 5
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=7.4e-44 Score=305.77 Aligned_cols=282 Identities=36% Similarity=0.621 Sum_probs=236.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceEE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK 77 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~ 77 (290)
++|||++|+|+++| .++.+++||||++.++.+|++|++|..+.+|+|++..+++.. +.+|+|+||+.+|.++.++
T Consensus 58 i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~ 136 (350)
T COG1063 58 ILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLA 136 (350)
T ss_pred ccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCee
Confidence 78999999999999 778899999999999999999999999999999977655432 2689999999999766555
Q ss_pred C-CCCCChhhhhhhhhhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC
Q 022879 78 L-PDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD 154 (290)
Q Consensus 78 ~-P~~~~~~~aa~~~~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~ 154 (290)
+ |++++.+.|++.+++++++++. ......++.+|+|+|+|++|++++++++.+|+..|++++.+++|++++++ .+++
T Consensus 137 ~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~ 216 (350)
T COG1063 137 KLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD 216 (350)
T ss_pred cCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence 4 7777777788889999998774 33445555599999999999999999999999999999999999999999 5566
Q ss_pred EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEE
Q 022879 155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG 233 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~ 233 (290)
.+++. ..++....+.++ +++.++|++|||+|.+..+.++++.++++|+++.+|...... .++...++.+++++.|
T Consensus 217 ~~~~~--~~~~~~~~~~~~--t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~g 292 (350)
T COG1063 217 VVVNP--SEDDAGAEILEL--TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRG 292 (350)
T ss_pred EeecC--ccccHHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEe
Confidence 55442 222344444343 356689999999999888999999999999999999876655 5667778999999999
Q ss_pred eee-c-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879 234 VFR-Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 290 (290)
Q Consensus 234 ~~~-~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~~ 290 (290)
++. . ...++.+++++.+|++++.+.+++.+++ +++++|++.+.+... ..|+++.+
T Consensus 293 s~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 293 SLRPSGREDFERALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ccCCCCcccHHHHHHHHHcCCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence 965 3 6789999999999999998888888888 999999999987543 66999874
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.2e-43 Score=307.22 Aligned_cols=281 Identities=31% Similarity=0.483 Sum_probs=240.0
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC--------------------CC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PV 60 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 60 (290)
+++|||++|+|+++|++++++++||+|++.+..+|+.|.+|+.|++++|+.....+.. ..
T Consensus 63 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g 142 (371)
T cd08281 63 MALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLG 142 (371)
T ss_pred ccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccC
Confidence 3799999999999999999999999999988889999999999999999876432110 01
Q ss_pred CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 138 (290)
Q Consensus 61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v 138 (290)
.|+|+||+.++++.++++|+++++.+|+.++ .+.|||+++. .+.++++++|||+|+|++|++++|+|+.+|++.|+++
T Consensus 143 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~ 222 (371)
T cd08281 143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAV 222 (371)
T ss_pred cccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEE
Confidence 3799999999999999999999999999774 6788998874 4789999999999999999999999999999668899
Q ss_pred eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--C
Q 022879 139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--E 216 (290)
Q Consensus 139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~ 216 (290)
+.++++.++++++|++.++++ ..+++.+.+++++ . .++|++|||+|.+..+..+++.++++|+++.+|.... .
T Consensus 223 ~~~~~r~~~a~~~Ga~~~i~~--~~~~~~~~i~~~~--~-~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 297 (371)
T cd08281 223 DLNEDKLALARELGATATVNA--GDPNAVEQVRELT--G-GGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEAR 297 (371)
T ss_pred cCCHHHHHHHHHcCCceEeCC--CchhHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCce
Confidence 999999999999999988874 3456666666653 3 3799999999987789999999999999999996542 2
Q ss_pred ccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 217 MTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 217 ~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
..++...++.+++++.+++.. .++++++++++.+|++++.+.+++.|++ +|+++|++.+.+++..+|+|+
T Consensus 298 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 298 LSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred eeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence 345555678899999998754 4678999999999999888888999999 999999999999988877764
No 7
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4e-43 Score=303.24 Aligned_cols=282 Identities=30% Similarity=0.561 Sum_probs=241.2
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|+++++|++||+|++.+..+|+.|++|..|+.++|......+. ..+|+|+||+.++++.++++|+
T Consensus 55 ~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~ 133 (347)
T PRK10309 55 ITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPT 133 (347)
T ss_pred cccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcC
Confidence 368999999999999999999999999999999999999999999999987665543 4589999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
++++++|+.++++++++++++...++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++
T Consensus 134 ~~s~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~ 213 (347)
T PRK10309 134 DMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR 213 (347)
T ss_pred CCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc
Confidence 99999999876677788887777889999999999899999999999999997678888999999999999999888743
Q ss_pred CCcccHHHHHHHHHHHhCCCcc-EEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcccc---chhhhccCcEEEEeee
Q 022879 161 TNLQDIAEEVEKIQKAMGTGID-VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFR 236 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~~~~~ 236 (290)
. .+ .+.+.++. .+.++| ++|||+|.+..+..+++.++++|+++.+|.......++ ...++.+++++.|.+.
T Consensus 214 ~--~~-~~~~~~~~--~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 288 (347)
T PRK10309 214 E--MS-APQIQSVL--RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWM 288 (347)
T ss_pred c--cC-HHHHHHHh--cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEec
Confidence 2 23 33444442 455788 99999998778899999999999999999654332232 2346778899999765
Q ss_pred c------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 237 Y------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 237 ~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
. .++++++++++++|.+++++.+++.|++ +|+++|++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cccCCcchhHHHHHHHHHHcCCCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 3 3678999999999999888889999999 99999999999988889999875
No 8
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-44 Score=288.21 Aligned_cols=278 Identities=27% Similarity=0.444 Sum_probs=234.9
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCccc-cC-----CCCCcccceeEeecCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFF-AT-----PPVHGSLANQVVHPAD 73 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~g~~~e~~~v~~~ 73 (290)
+|+|||.+|+|+++|++|++|++||+|-+ ..+..|..|++|..+.+++|+..-+. .. ..++|+||+|+++++.
T Consensus 67 lV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~ 146 (360)
T KOG0023|consen 67 LVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEV 146 (360)
T ss_pred ccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeee
Confidence 68999999999999999999999999965 56789999999999999999954222 12 2345669999999999
Q ss_pred ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHc
Q 022879 74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEI 151 (290)
Q Consensus 74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~l 151 (290)
+++++|++++.+.||++. ..-|+|..+...++.||+++.|.|+|++|.+++|+|+++|. +|++++++. +|.+.++.|
T Consensus 147 ~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L 225 (360)
T KOG0023|consen 147 FAIKIPENLPLASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL 225 (360)
T ss_pred eEEECCCCCChhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence 999999999999999885 44579999998889999999999997799999999999999 688888887 778888999
Q ss_pred CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEE
Q 022879 152 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV 231 (290)
Q Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i 231 (290)
|++..++. ..++++.+.+.+. .+.++|-+.+- ....+..++.+++.+|++|.+|.......++..++.++.+.|
T Consensus 226 GAd~fv~~-~~d~d~~~~~~~~---~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 226 GADVFVDS-TEDPDIMKAIMKT---TDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSI 299 (360)
T ss_pred CcceeEEe-cCCHHHHHHHHHh---hcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEE
Confidence 99998874 3356776666553 23334444433 456788999999999999999988877888899999999999
Q ss_pred EEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 232 VGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 232 ~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.|+.-. +.+.++++++..+|.+ ++.+ +..++ +++++|+++|++++...|.|+++
T Consensus 300 ~GS~vG~~ket~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 300 KGSIVGSRKETQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred EeeccccHHHHHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence 999876 8899999999999999 4444 45678 99999999999999888988864
No 9
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.6e-43 Score=287.12 Aligned_cols=282 Identities=29% Similarity=0.486 Sum_probs=242.8
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc-------cC-----------CCCC-
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-------AT-----------PPVH- 61 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----------~~~~- 61 (290)
+++|||++|+|++||++|++++|||+|+...+..|++|.+|..+++|+|...... .+ ....
T Consensus 57 ~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG 136 (366)
T COG1062 57 AVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLG 136 (366)
T ss_pred eecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeec
Confidence 4799999999999999999999999999999999999999999999999933111 10 1222
Q ss_pred -cccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879 62 -GSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 138 (290)
Q Consensus 62 -g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v 138 (290)
++|+||.++++..+++++++.+++.++++ ....|.+-++. .+++++|+++.|.|.|++|++++|=|+..|+++++++
T Consensus 137 ~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAv 216 (366)
T COG1062 137 CSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAV 216 (366)
T ss_pred cccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEE
Confidence 49999999999999999999999999988 47777887664 4899999999999999999999999999999999999
Q ss_pred eCChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc
Q 022879 139 DVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217 (290)
Q Consensus 139 ~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 217 (290)
+.+++|++++++||++++++. .+. +..+.+.+++ +.+.|.+|||+|..+.+++++.++.++|+.+.+|......
T Consensus 217 D~~~~Kl~~A~~fGAT~~vn~--~~~~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~ 291 (366)
T COG1062 217 DINPEKLELAKKFGATHFVNP--KEVDDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQ 291 (366)
T ss_pred eCCHHHHHHHHhcCCceeecc--hhhhhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 999999999999999999873 333 5767776663 4589999999999999999999999999999999877655
Q ss_pred cccchhhh-ccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 218 TVPLTPAA-VREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 218 ~~~~~~~~-~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.++.+.+. .....|.|++.. +.++..+++++.+|++++.+.+++.++| +|+++||+.|.+++. .|.||++
T Consensus 292 ~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~-IR~Vi~~ 366 (366)
T COG1062 292 EISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKS-IRSVIRF 366 (366)
T ss_pred eeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCce-eeEEecC
Confidence 55555532 233788888765 7799999999999999999999999888 999999999999844 5777764
No 10
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.9e-42 Score=301.41 Aligned_cols=283 Identities=23% Similarity=0.400 Sum_probs=236.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc----------------cC----CCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----------------AT----PPVH 61 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~----~~~~ 61 (290)
++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|+.+++++|+..... |. ...+
T Consensus 66 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 145 (378)
T PLN02827 66 IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAV 145 (378)
T ss_pred eecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCccccccccc
Confidence 689999999999999999999999999998889999999999999999874221 00 0124
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
|+|+||+.+++..++++|+++++++++.++ .+.++|+++. .+++++|++|||+|+|++|++++|+|+++|++.+++++
T Consensus 146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 899999999999999999999999888774 6677887664 47889999999999999999999999999997788888
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCcc
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMT 218 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 218 (290)
.++++.++++++|++.++++...++++.+.+++++ . .++|++||++|.+..+..+++.++++ |+++.+|.......
T Consensus 226 ~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~ 302 (378)
T PLN02827 226 INPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMT--G-GGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPE 302 (378)
T ss_pred CCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCcc
Confidence 89999999999999988875432345666666653 3 37999999999877889999999998 99999997543333
Q ss_pred ccc-hhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 219 VPL-TPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 219 ~~~-~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.. ..++.+++++.|.... ..+++++++++++|++++.+.++++|++ +++++|++.+.+++. .|.||.+
T Consensus 303 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 303 VSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred ccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 333 3467899999988653 3578899999999999776689999998 999999999998865 6999875
No 11
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.7e-42 Score=302.49 Aligned_cols=284 Identities=27% Similarity=0.464 Sum_probs=237.2
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-----------------------
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------- 57 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 57 (290)
.++|||++|+|+++|+++++|++||||++.+..+|++|.+|..+.+++|+.....+.
T Consensus 67 ~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (381)
T PLN02740 67 RILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYH 146 (381)
T ss_pred ccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccc
Confidence 378999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879 58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRI 135 (290)
Q Consensus 58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~v 135 (290)
...+|+|+||+++++++++++|+++++++++.++ .+.|+|+++. .+++++|++|||+|+|++|++++|+|+.+|++.|
T Consensus 147 ~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~V 226 (381)
T PLN02740 147 FLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKI 226 (381)
T ss_pred cccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcE
Confidence 0125999999999999999999999999988774 7788998764 4889999999999999999999999999999668
Q ss_pred EEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCC
Q 022879 136 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGH 214 (290)
Q Consensus 136 v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 214 (290)
+++++++++.++++++|++.++++...++++.+.++++. .+ ++|++||++|.+..+..++..++++ |+++.+|...
T Consensus 227 i~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~--~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~ 303 (381)
T PLN02740 227 IGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMT--GG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHP 303 (381)
T ss_pred EEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHh--CC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCC
Confidence 899999999999999999988875433335666666653 33 7999999999878899999999886 9999999654
Q ss_pred CCccccchhh-hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 215 HEMTVPLTPA-AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 215 ~~~~~~~~~~-~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
....++.... +.+++++.|++.. ...+.++++++.+|.+++.+.++++|++ +|+++|++.+.+++. .|++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 304 TPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred CCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEe
Confidence 3322333332 3467888887653 3468899999999999877788999999 999999999988754 699987
Q ss_pred C
Q 022879 290 L 290 (290)
Q Consensus 290 ~ 290 (290)
+
T Consensus 381 ~ 381 (381)
T PLN02740 381 L 381 (381)
T ss_pred C
Confidence 4
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.5e-42 Score=298.45 Aligned_cols=282 Identities=26% Similarity=0.413 Sum_probs=231.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC-----------------CCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVH 61 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~ 61 (290)
++|||++|+|+++|+++++|++||||++.+..+|++|.+|+.+++++|.+.... +. ...+
T Consensus 58 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 137 (368)
T TIGR02818 58 ILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGC 137 (368)
T ss_pred eeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccC
Confidence 789999999999999999999999999998899999999999999999875321 00 0014
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
|+|+||+.+++++++++|+++++++++.++ ++.|+|+++. .++++++++|||+|+|++|++++|+|+.+|+++|++++
T Consensus 138 G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 138 STFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 799999999999999999999999999875 7889999874 47899999999999999999999999999996689999
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC--
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE-- 216 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~-- 216 (290)
.++++.++++++|++.++++....+++.+.+++++ . .++|++||++|.+..+..++++++++ |+++.+|.....
T Consensus 218 ~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~ 294 (368)
T TIGR02818 218 INPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT--D-GGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQE 294 (368)
T ss_pred CCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHh--C-CCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCc
Confidence 99999999999999988875432345556666553 3 37999999999877889999999886 999999965322
Q ss_pred ccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 217 MTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 217 ~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
..+....+. +...+.+.... +.+++++++++.+|++++++.+++.|+| +|+++|++.+.+++ ..|++|++
T Consensus 295 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~ 368 (368)
T TIGR02818 295 ISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY 368 (368)
T ss_pred ccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence 222222233 23446665432 4578999999999999888889999999 99999999998774 47999875
No 13
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=7.2e-43 Score=292.65 Aligned_cols=260 Identities=25% Similarity=0.394 Sum_probs=220.7
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC------CCCcccceeEe
Q 022879 2 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV 69 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~ 69 (290)
|+|||++|+|+++|++|+ +|++||||++.+..+|++|.+|+.+++++|++..++|.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 689999999999999999 899999999999999999999999999999987765432 24799999999
Q ss_pred ecCC-ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 022879 70 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 147 (290)
Q Consensus 70 v~~~-~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 147 (290)
++++ .++++|+++++++++.++ .+.|++++++.....++++|||+|+|++|++++|+|+.+|++++++++.+++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 799999999999998774 67889999877666799999999999999999999999999768888899999999
Q ss_pred HHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhh
Q 022879 148 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAA 225 (290)
Q Consensus 148 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 225 (290)
++++|++.+++.. +..+.+.++ +.+.++|++||++|.+..+..+++.++++|+++.+|... ....++...++
T Consensus 161 a~~~Ga~~~i~~~----~~~~~~~~~--~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPE----VLAERQGGL--QNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCch----hhHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 9999998887632 223344443 245689999999998788899999999999999999643 23355666788
Q ss_pred ccCcEEEEeeec-CCcHHHHHHHHHcC--CCCCCCceeeEeeCChhh
Q 022879 226 VREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE 269 (290)
Q Consensus 226 ~~~~~i~~~~~~-~~~l~~~~~~~~~g--~~~~~~~~~~~~~~~~~~ 269 (290)
.+++++.+++.. .++++++++++.++ ++++++.+++.|++ +|
T Consensus 235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 899999998876 56899999999985 55566788888887 65
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.1e-42 Score=297.35 Aligned_cols=282 Identities=29% Similarity=0.468 Sum_probs=237.3
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--------cC----CCCCcccceeE
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQV 68 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~e~~ 68 (290)
+++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|..+++++|...... |. ...+|+|+||+
T Consensus 56 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~ 135 (358)
T TIGR03451 56 FLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKT 135 (358)
T ss_pred cccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceE
Confidence 3789999999999999999999999999999999999999999999999853211 10 01359999999
Q ss_pred eecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879 69 VHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 146 (290)
Q Consensus 69 ~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~ 146 (290)
.+++.+++++|+++++++|+.++ .+.++|+++. .+.++++++|||+|+|++|++++|+|+.+|+++++++++++++.+
T Consensus 136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 99999999999999999988775 6778887764 478899999999999999999999999999976899999999999
Q ss_pred HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhh
Q 022879 147 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPA 224 (290)
Q Consensus 147 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~ 224 (290)
+++++|++.++++. .+++.+.+++.. .+.++|++|||+|.+..+..+++.++++|+++.+|..... ..++...+
T Consensus 216 ~~~~~Ga~~~i~~~--~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~ 291 (358)
T TIGR03451 216 WAREFGATHTVNSS--GTDPVEAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDV 291 (358)
T ss_pred HHHHcCCceEEcCC--CcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHH
Confidence 99999999888743 456666666553 4567999999999877889999999999999999975432 23444567
Q ss_pred hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 225 AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 225 ~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+.+++++.+.+.. .++++++++++++|++++.+.+++.|++ +|+++|++.+.+++.. |+++.
T Consensus 292 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 292 FGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred hhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence 7788999887532 5678999999999999877788999999 9999999999888554 77775
No 15
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.6e-41 Score=293.74 Aligned_cols=282 Identities=39% Similarity=0.673 Sum_probs=245.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|+..+..+|+.|.+|+.++.++|..+.+.+....+|+|+||+.++.+.++++|++
T Consensus 67 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 146 (351)
T cd08233 67 TLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDN 146 (351)
T ss_pred eecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCC
Confidence 68999999999999999999999999999999999999999999999998765543233799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++.+.++.+||+++..++++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.
T Consensus 147 ~~~~~aa~~~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~- 225 (351)
T cd08233 147 VPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPT- 225 (351)
T ss_pred CCHHHhhhccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC-
Confidence 9999998777788999999778899999999999899999999999999997788888999999999999999888743
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CCc
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT 240 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 240 (290)
..++.+.++++. .++++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+.+.+ .++
T Consensus 226 -~~~~~~~l~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 302 (351)
T cd08233 226 -EVDVVAEVRKLT--GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTRED 302 (351)
T ss_pred -ccCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcch
Confidence 456777776653 4567999999999767889999999999999999976544456666678899999998766 688
Q ss_pred HHHHHHHHHcCCCCCCCceeeEeeCChhhH-HHHHHHHhcCCC-ceeEEEe
Q 022879 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEV-EEAFETSARGGT-AIKVMFN 289 (290)
Q Consensus 241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~-~gk~vl~ 289 (290)
++++++++++|.+++.+.+++.|++ +|+ ++|++.+.+++. .+|+||.
T Consensus 303 ~~~~~~~~~~g~l~~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 303 FEEVIDLLASGKIDAEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999999777778888888 996 789999988876 4999974
No 16
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.3e-41 Score=293.79 Aligned_cols=282 Identities=23% Similarity=0.445 Sum_probs=239.3
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|++++.+ +||+|++.+..+|++|..|+.+++++|......|. ..+|+|+||+.+++++++++|+
T Consensus 55 ~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~ 132 (349)
T TIGR03201 55 LALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDE 132 (349)
T ss_pred eeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCc
Confidence 368999999999999999887 99999999999999999999999999998766553 3579999999999999999999
Q ss_pred ------CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879 81 ------NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153 (290)
Q Consensus 81 ------~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 153 (290)
+++++.++.+ ..+.++|+++....++++++|+|+|+|++|++++|+|+.+|+ .++++++++++.++++++|+
T Consensus 133 ~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga 211 (349)
T TIGR03201 133 ARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGA 211 (349)
T ss_pred ccccccCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCC
Confidence 8998888866 588899999887888999999999999999999999999999 58889999999999999999
Q ss_pred CEEEecCCCc-ccHHHHHHHHHHHhCCCcc----EEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccC
Q 022879 154 DNIVKVSTNL-QDIAEEVEKIQKAMGTGID----VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 228 (290)
Q Consensus 154 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 228 (290)
+.++++...+ +++.+.+++++ .+.++| ++|||+|.+..+..++++++++|+++.+|.......++...++.+.
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~t--~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 289 (349)
T TIGR03201 212 DLTLNPKDKSAREVKKLIKAFA--KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFH 289 (349)
T ss_pred ceEecCccccHHHHHHHHHhhc--ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcc
Confidence 8887753321 24555555543 455676 8999999877888899999999999999976544455555667778
Q ss_pred cEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 229 VDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 229 ~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.++.+.+.. ..+++++++++++|++++.+.++ .|++ +|+++|++.+.+++..+|+++++
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 290 ARALGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cEEEEEecCCHHHHHHHHHHHHcCCCCcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence 888888764 56799999999999997766665 6788 99999999999998889999864
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.4e-41 Score=294.24 Aligned_cols=275 Identities=21% Similarity=0.357 Sum_probs=224.7
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD 73 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~ 73 (290)
+++|||++|+|+++|+++++|++||+|++.+. .+|++|.+|+.|++++|++..+.. +...+|+|+||+.++++
T Consensus 68 ~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~ 147 (360)
T PLN02586 68 IVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQH 147 (360)
T ss_pred ccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchH
Confidence 37899999999999999999999999986544 479999999999999999765431 12247999999999999
Q ss_pred ceEECCCCCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHH
Q 022879 74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKE 150 (290)
Q Consensus 74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~ 150 (290)
+++++|+++++++|+.++ .+.|+|+++.. ...+++++|||.|+|++|++++|+|+.+|++ +++++.++ ++.+.+++
T Consensus 148 ~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~ 226 (360)
T PLN02586 148 FVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINR 226 (360)
T ss_pred HeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHh
Confidence 999999999999999774 67788988865 5568999999999999999999999999995 66665554 44567788
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 230 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 230 (290)
+|++.++++.. . +.+++.. .++|++||++|.+..+..++++++++|+++.+|.......++...++.+...
T Consensus 227 ~Ga~~vi~~~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~ 297 (360)
T PLN02586 227 LGADSFLVSTD--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKL 297 (360)
T ss_pred CCCcEEEcCCC--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeE
Confidence 99988876432 1 2343332 2699999999986788999999999999999996544445666667778888
Q ss_pred EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+.+.. ..+++++++++.+|+++ +.+ +.|++ +|+++|++.+.+++..+|+|+++
T Consensus 298 i~g~~~~~~~~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 298 VGGSDIGGIKETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEcCcCCHHHHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 8887654 45789999999999995 344 47888 99999999999998889999874
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.1e-41 Score=293.73 Aligned_cols=283 Identities=26% Similarity=0.467 Sum_probs=234.1
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC------------------CC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PP 59 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~ 59 (290)
+++|||++|+|+++|+++++|++||+|++.+..+|++|.+|..++++.|...... +. ..
T Consensus 58 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~ 137 (369)
T cd08301 58 RILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFV 137 (369)
T ss_pred cccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeee
Confidence 3789999999999999999999999999999999999999999999999976422 00 01
Q ss_pred CCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879 60 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI 137 (290)
Q Consensus 60 ~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~ 137 (290)
..|+|+||+.+++.+++++|+++++++++.++ .+.|+|+++. .+++++|++|||+|+|++|++++|+|+.+|+..+++
T Consensus 138 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~ 217 (369)
T cd08301 138 GTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIG 217 (369)
T ss_pred ccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 34899999999999999999999999998774 6788998764 478999999999999999999999999999966899
Q ss_pred EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC
Q 022879 138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE 216 (290)
Q Consensus 138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 216 (290)
+++++++.++++++|++.++++...++++.+.++++. +.++|++||++|.+..+..++++++++ |+++.+|.....
T Consensus 218 ~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~ 294 (369)
T cd08301 218 VDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD 294 (369)
T ss_pred EcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC
Confidence 9999999999999999888875432234555565553 347999999999877888999999996 999999975432
Q ss_pred ccccchh-hhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 217 MTVPLTP-AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 217 ~~~~~~~-~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
..++... .+.+++++.|++.. +.+++++++++.+|.+++.+.+++.|++ +|+++|++.+.+++. .|++|+
T Consensus 295 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 295 AVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred cccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence 2333322 23468899887643 4578999999999999877788899999 999999999998865 488874
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.7e-41 Score=294.72 Aligned_cols=283 Identities=22% Similarity=0.418 Sum_probs=224.2
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc------ccC---CCCCcccceeEeec
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------FAT---PPVHGSLANQVVHP 71 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~g~~~e~~~v~ 71 (290)
+++|||++|+|+++|++|++|++||||.+.+..+|++|.+|+.|++++|..... ++. ...+|+|+||+.++
T Consensus 63 ~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~ 142 (393)
T TIGR02819 63 LVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVP 142 (393)
T ss_pred ccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEec
Confidence 479999999999999999999999999999999999999999999999997531 221 12469999999999
Q ss_pred CC--ceEECCCCCCh----hhhhh-hhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879 72 AD--LCFKLPDNVSL----EEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR 144 (290)
Q Consensus 72 ~~--~~~~~P~~~~~----~~aa~-~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~ 144 (290)
+. .++++|++++. ..++. ..++.++|+++...+++++++|||.|+|++|++++|+|+.+|++.+++++.++++
T Consensus 143 ~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r 222 (393)
T TIGR02819 143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPAR 222 (393)
T ss_pred hhhCceEECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHH
Confidence 64 69999998753 23343 4688899999887889999999998889999999999999999767777788999
Q ss_pred HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH--------------HHHHHHHHHhccCCEEEEe
Q 022879 145 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 145 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~ 210 (290)
.++++++|++. +++ ....++.+.+.+++ .+.++|++||++|.+ ..+.++++.++++|+++.+
T Consensus 223 ~~~a~~~Ga~~-v~~-~~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~ 298 (393)
T TIGR02819 223 LAQARSFGCET-VDL-SKDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIP 298 (393)
T ss_pred HHHHHHcCCeE-Eec-CCcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEe
Confidence 99999999974 432 22345666666543 456799999999975 4789999999999999999
Q ss_pred ccCC-CCc-c-----------ccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCcee-eEeeCChhhHHHHHH
Q 022879 211 GMGH-HEM-T-----------VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFE 275 (290)
Q Consensus 211 g~~~-~~~-~-----------~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~ 275 (290)
|... ... . +.....+.+++++.+.... .+.+.++++++.+|++++.+.++ +.|++ +|+++|++
T Consensus 299 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~ 376 (393)
T TIGR02819 299 GLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYA 376 (393)
T ss_pred eecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHH
Confidence 9752 111 1 1122344566666664333 23347899999999998766676 67888 99999999
Q ss_pred HHhcCCCceeEEEeC
Q 022879 276 TSARGGTAIKVMFNL 290 (290)
Q Consensus 276 ~~~~~~~~gk~vl~~ 290 (290)
.+.++ ..+|++|++
T Consensus 377 ~~~~~-~~~Kvvi~~ 390 (393)
T TIGR02819 377 EFDAG-AAKKFVIDP 390 (393)
T ss_pred HHhhC-CceEEEEeC
Confidence 99887 458999874
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.6e-41 Score=292.55 Aligned_cols=274 Identities=19% Similarity=0.330 Sum_probs=226.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCCc
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADL 74 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~ 74 (290)
++|||++|+|+++|+++++|++||+|++.+.. +|++|.+|+.|++++|++..... +...+|+|+||+.+++++
T Consensus 63 i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~ 142 (375)
T PLN02178 63 IPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF 142 (375)
T ss_pred ccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH
Confidence 68999999999999999999999999876554 69999999999999999865321 112369999999999999
Q ss_pred eEECCCCCChhhhhhhh-hhHHHHHHHHhcC--CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHH
Q 022879 75 CFKLPDNVSLEEGAMCE-PLSVGVHACRRAN--IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKE 150 (290)
Q Consensus 75 ~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~--~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~ 150 (290)
++++|+++++++|++++ ...|+|+++.... .+++++|+|.|+|++|++++|+|+++|++ +++++.++ ++.+++++
T Consensus 143 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~ 221 (375)
T PLN02178 143 VLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDR 221 (375)
T ss_pred eEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHh
Confidence 99999999999998774 6678898886533 36899999999999999999999999995 67776654 45788899
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 230 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 230 (290)
+|+++++++.. . +.+.+.. .++|++||++|.+..+..++++++++|+++.+|.......++...++.++++
T Consensus 222 lGa~~~i~~~~--~---~~v~~~~----~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~ 292 (375)
T PLN02178 222 LGADSFLVTTD--S---QKMKEAV----GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKM 292 (375)
T ss_pred CCCcEEEcCcC--H---HHHHHhh----CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeE
Confidence 99998876432 1 2344332 2699999999986688999999999999999997544445666677889999
Q ss_pred EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.|++.. ..+++++++++++|+++ +.+ +.|+| +|+++|++.+.+++..||+|+.+
T Consensus 293 i~g~~~~~~~~~~~~~~l~~~g~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 293 VGGSQIGGMKETQEMLEFCAKHKIV--SDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred EEEeCccCHHHHHHHHHHHHhCCCc--ccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence 9998765 46789999999999994 444 56888 99999999999998889999874
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=8.8e-41 Score=290.56 Aligned_cols=283 Identities=27% Similarity=0.457 Sum_probs=230.4
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC-----------------CCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPV 60 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~ 60 (290)
+++|||++|+|+++|+++++|++||+|++.+..+|++|.+|+.+++++|.+.... |. ...
T Consensus 58 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~ 137 (368)
T cd08300 58 VILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMG 137 (368)
T ss_pred ceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccc
Confidence 3789999999999999999999999999998899999999999999999875321 00 012
Q ss_pred CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 138 (290)
Q Consensus 61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v 138 (290)
.|+|+||+.++++.++++|+++++.+++.++ .+.|+|+++. .+.++++++|||+|+|++|++++|+|+.+|++.++++
T Consensus 138 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~ 217 (368)
T cd08300 138 TSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGI 217 (368)
T ss_pred cccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 4799999999999999999999999998775 7789999874 4789999999999999999999999999999668999
Q ss_pred eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCc
Q 022879 139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEM 217 (290)
Q Consensus 139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~ 217 (290)
++++++.++++++|++.++++...++++.+.+++++ . .++|++||++|.+..+..++++++++ |+++.+|......
T Consensus 218 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~ 294 (368)
T cd08300 218 DINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMT--D-GGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQ 294 (368)
T ss_pred eCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHh--C-CCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCC
Confidence 999999999999999998875433335667776653 3 38999999999877889999999886 9999999653211
Q ss_pred cccchhh-hccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 218 TVPLTPA-AVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 218 ~~~~~~~-~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.++...+ ..+...+.+... ...+++++++++++|++++.+.++++|+| +|+++|++.+.+++ ..|++++
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~-~~k~~~~ 368 (368)
T cd08300 295 EISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGK-SIRTVVK 368 (368)
T ss_pred ccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCC-CceeeeC
Confidence 2222221 122345555432 25678899999999999877888999999 99999999998875 4698875
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.6e-40 Score=287.30 Aligned_cols=282 Identities=27% Similarity=0.473 Sum_probs=234.5
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-------------------CCCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVH 61 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 61 (290)
+++|||++|+|+++|++++++++||+|++.+...|+.|.+|..+++++|++...++. ....
T Consensus 57 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (365)
T cd08277 57 VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGT 136 (365)
T ss_pred eecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccc
Confidence 368999999999999999999999999998889999999999999999987643211 0125
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
|+|+||+.+++++++++|+++++++++.++ .+.|||+++ +.+.++++++|||+|+|++|++++|+|+.+|+..+++++
T Consensus 137 g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~ 216 (365)
T cd08277 137 STFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVD 216 (365)
T ss_pred ccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 899999999999999999999999999875 788999886 457899999999999899999999999999997788999
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC-Cc
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EM 217 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~ 217 (290)
+++++.++++++|++++++....+.++.+.+++++ . .++|++||++|.+..+..++++++++ |+++.+|.... ..
T Consensus 217 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~--~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 293 (365)
T cd08277 217 INEDKFEKAKEFGATDFINPKDSDKPVSEVIREMT--G-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL 293 (365)
T ss_pred CCHHHHHHHHHcCCCcEeccccccchHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcccc
Confidence 99999999999999888875433334555666553 2 57999999999877888999999885 99999996542 22
Q ss_pred cccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 218 TVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 218 ~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.++...+.. ++++.+++.. +.+++++++++.++.+++.+.+++.|++ +|+++|++.+.+++ ..|++++
T Consensus 294 ~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 294 SIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred ccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence 334434443 7888887654 3578999999999998888889999999 99999999998876 5698874
No 23
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.7e-40 Score=284.20 Aligned_cols=267 Identities=22% Similarity=0.274 Sum_probs=229.4
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 79 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P 79 (290)
+++|||++|+|+++|+++++|++||+|++.+. ..|+.|.+|..+++++|+.+..+|. ..+|+|+||+.+++.+++++|
T Consensus 58 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP 136 (329)
T TIGR02822 58 VTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLP 136 (329)
T ss_pred ccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECC
Confidence 37899999999999999999999999987654 4699999999999999998876653 457999999999999999999
Q ss_pred CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++++.+++.+ ..+.|||+++..+++++|++|||+|+|++|++++|+|+.+|+ .++++++++++.++++++|++++++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 137 TGYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGG 215 (329)
T ss_pred CCCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecc
Confidence 99999999866 578899999977889999999999999999999999999999 5888889999999999999998876
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
+.. . ...++|+++++.+....+..+++.++++|+++.+|.... ...++...++.+++++.+.+..
T Consensus 216 ~~~--~------------~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 216 AYD--T------------PPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred ccc--c------------CcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC
Confidence 321 1 123689999988877889999999999999999996432 2245555667788999888765
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
+..+.++++++.+|+++ .+++.|+| +|+++|++.+.+++..||+||
T Consensus 282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 282 TRADAREFLELAAQHGVR---VTTHTYPL--SEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CHHHHHHHHHHHHhCCCe---eEEEEEeH--HHHHHHHHHHHcCCCceEEEe
Confidence 56788899999999984 35788888 999999999999999999987
No 24
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9.9e-40 Score=283.82 Aligned_cols=288 Identities=89% Similarity=1.417 Sum_probs=245.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|++.+..+|++|..|..|..++|+....++....+|+|+||+.+++..++++|++
T Consensus 76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 76 VIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred ccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCC
Confidence 68999999999999999999999999999999999999999999999998655544445799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++...+++++++++...++.+++++||+|+|++|++++++++.+|++.++++++++++.+.++++|++.+++++.
T Consensus 156 l~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (364)
T PLN02702 156 VSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST 235 (364)
T ss_pred CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCc
Confidence 99999986556667888886688899999999988999999999999999977888888999999999999998877654
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCcH
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 241 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 241 (290)
...++.+.+.++.+..+.++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+.+.....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (364)
T PLN02702 236 NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTW 315 (364)
T ss_pred ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHH
Confidence 45567777766543345679999999997678899999999999999999643333445556778899999887666788
Q ss_pred HHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 242 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+.++++++++.+.+.+.+.+.|+++++++++|++.+.+++..+|+++.
T Consensus 316 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 316 PLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 999999999998655567778777668999999999888788999985
No 25
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.4e-40 Score=280.43 Aligned_cols=255 Identities=31% Similarity=0.434 Sum_probs=212.8
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+|||.|++|+|+++|++|++|++||||+... . ...+|+|+||+.+++++++++|+
T Consensus 59 ~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~ 113 (326)
T COG0604 59 FIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPD 113 (326)
T ss_pred CcccceeEEEEEEeCCCCCCcCCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCC
Confidence 5899999999999999999999999999742 0 00469999999999999999999
Q ss_pred CCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 81 NVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 81 ~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
++++++||.++ .+.|||+++.. .++++|++|||+|+ |++|.+++|||+++|+ .++++.+++++.++++++|+++++
T Consensus 114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi 192 (326)
T COG0604 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI 192 (326)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence 99999999884 88899999976 88999999999986 9999999999999998 455665777777799999999999
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhhccCcEEEEee
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVF 235 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~ 235 (290)
+|. +++|.+.+++++ ++.++|+|||++|+ +.+..+++.|+++|+++.+|... ....++...+..+.+...+..
T Consensus 193 ~y~--~~~~~~~v~~~t--~g~gvDvv~D~vG~-~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~ 267 (326)
T COG0604 193 NYR--EEDFVEQVRELT--GGKGVDVVLDTVGG-DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267 (326)
T ss_pred cCC--cccHHHHHHHHc--CCCCceEEEECCCH-HHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence 854 456999998874 56789999999997 68888999999999999999755 233455556677788877776
Q ss_pred ec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhc-CCCceeEEEeC
Q 022879 236 RY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL 290 (290)
Q Consensus 236 ~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vl~~ 290 (290)
.. .+.++++++++.+|.+ ++.++.+|++ ++..++...... ++..||+||++
T Consensus 268 ~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 268 LGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ceecchHHHHHHHHHHHHHHHcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence 54 3578889999999999 7778888999 995555444333 57899999975
No 26
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=7.4e-40 Score=283.62 Aligned_cols=273 Identities=29% Similarity=0.435 Sum_probs=220.2
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCCceEECC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLP 79 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P 79 (290)
++|||++|+|+++|++ +.|++||||+..+..+|+.|.+|..+++++|+....+ |....+|+|+||+.++++.++++|
T Consensus 60 i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P 138 (355)
T cd08230 60 VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVP 138 (355)
T ss_pred eeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECC
Confidence 6899999999999999 9999999999998889999999999999999876543 222357999999999999999999
Q ss_pred CCCChhhhhhhhhhHHHHHHHHh-------cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC---ChhHHHHHH
Q 022879 80 DNVSLEEGAMCEPLSVGVHACRR-------ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV---DDYRLSVAK 149 (290)
Q Consensus 80 ~~~~~~~aa~~~~~~ta~~~l~~-------~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~ 149 (290)
++++ ..++...++++++.++.. ...+++++|||+|+|++|++++|+|+.+|+ .++++++ +++|.++++
T Consensus 139 ~~~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 139 PSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred CCCC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence 9999 555555566665554422 235789999999999999999999999999 5888876 688999999
Q ss_pred HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccccc----chh
Q 022879 150 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP----LTP 223 (290)
Q Consensus 150 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~ 223 (290)
++|++. +++. .+++.+ . . ...++|++||++|.+..+..+++.++++|+++.+|.... ...++ ...
T Consensus 217 ~~Ga~~-v~~~--~~~~~~-~----~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~ 287 (355)
T cd08230 217 ELGATY-VNSS--KTPVAE-V----K-LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRD 287 (355)
T ss_pred HcCCEE-ecCC--ccchhh-h----h-hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhh
Confidence 999986 3432 233332 1 1 235799999999987788999999999999999996544 22333 345
Q ss_pred hhccCcEEEEeeec-CCcHHHHHHHHHcCCC----CCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 224 AAVREVDVVGVFRY-KNTWPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 224 ~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
++.+++++.|++.. .++++++++++.++.+ .+++.++++|++ +|+.+|++.+.++. +|++|+|
T Consensus 288 ~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 288 LVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence 67899999998765 6689999999998872 246778899999 99999999887653 5999986
No 27
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-40 Score=261.03 Aligned_cols=284 Identities=27% Similarity=0.442 Sum_probs=244.2
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-------------------CCC-
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPV- 60 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~- 60 (290)
.|+|||.+|+|+.+|.+|+.+++||+|+......|++|.+|..+..|+|..-..... ...
T Consensus 63 ~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfm 142 (375)
T KOG0022|consen 63 VILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFM 142 (375)
T ss_pred eEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEec
Confidence 379999999999999999999999999999999999999999999999985433221 011
Q ss_pred -CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879 61 -HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI 137 (290)
Q Consensus 61 -~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~ 137 (290)
..+|+||.+++...+.++++..+.+.++++ ....|+|.+.. .+.+++|+++.|.|.|++|+++++-|++.|+.++++
T Consensus 143 g~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIg 222 (375)
T KOG0022|consen 143 GTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIG 222 (375)
T ss_pred ccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEE
Confidence 238999999999999999999999999998 48888998764 599999999999999999999999999999999999
Q ss_pred EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC
Q 022879 138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE 216 (290)
Q Consensus 138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 216 (290)
++-+++|.+.+++||++..++..+......+.+.+++ +.++|+-|||+|..+.+.+++.+...+ |+-+.+|.....
T Consensus 223 vDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~ 299 (375)
T KOG0022|consen 223 VDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG 299 (375)
T ss_pred EecCHHHHHHHHhcCcceecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC
Confidence 9999999999999999999875433334666666664 578999999999999999999999888 999999987766
Q ss_pred ccccchhh-hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 217 MTVPLTPA-AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 217 ~~~~~~~~-~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
..++++++ +.+..++.|.... +.++..+++.+.++++++...+++.++| +++++|++.|.+++.. |.|+.+
T Consensus 300 ~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 300 QEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred cccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence 66666664 3456666666433 7899999999999999999999999999 9999999999999655 877764
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=9e-39 Score=277.63 Aligned_cols=284 Identities=29% Similarity=0.489 Sum_probs=236.3
Q ss_pred ccccceeEEEEEeCCCCCC------CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC------CCCcccceeEe
Q 022879 2 VIGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV 69 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~ 69 (290)
++|||++|+|+++|+++++ |++||+|+..+..+|+.|.+|+.+++++|+...+++.. ...|+|+||+.
T Consensus 57 ~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~ 136 (361)
T cd08231 57 ILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIY 136 (361)
T ss_pred ccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEE
Confidence 6899999999999999986 99999999999999999999999999999987666542 24699999999
Q ss_pred ecCC-ceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879 70 HPAD-LCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 146 (290)
Q Consensus 70 v~~~-~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~ 146 (290)
++++ .++++|+++++.+++.+ .++.|||+++.. ...+++++|||+|+|++|++++++|+.+|++.++++++++++.+
T Consensus 137 v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 137 LPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred ecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 9996 79999999999888877 688999999976 44569999999988999999999999999966888889999999
Q ss_pred HHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchh
Q 022879 147 VAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTP 223 (290)
Q Consensus 147 ~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~ 223 (290)
+++.+|++.+++++.... ++...+.++ +.++++|++||++|+...+...+++++++|+++.+|..... ..++...
T Consensus 217 ~~~~~g~~~vi~~~~~~~~~~~~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 294 (361)
T cd08231 217 LAREFGADATIDIDELPDPQRRAIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER 294 (361)
T ss_pred HHHHcCCCeEEcCcccccHHHHHHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence 999999988876543211 122344444 35678999999999767788999999999999999965422 2333344
Q ss_pred hhccCcEEEEeeec-CCcHHHHHHHHHcC--CCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 224 AAVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 224 ~~~~~~~i~~~~~~-~~~l~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
++.+++++.+.+.. .++++++++++.++ .+.+.+.++++|++ +++++|++.+.+++ .+|+||++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 295 IVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred HhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence 68889999888765 66899999999998 55567778888999 99999999998875 58999874
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-38 Score=275.57 Aligned_cols=275 Identities=20% Similarity=0.295 Sum_probs=224.1
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD 73 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~ 73 (290)
.++|||++|+|+++|+++++|++||+|++.+. ..|++|.+|..+++++|.+..+.. +...+|+|+||+.++..
T Consensus 65 ~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~ 144 (357)
T PLN02514 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQK 144 (357)
T ss_pred ccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchH
Confidence 37899999999999999999999999986543 369999999999999998764321 11246999999999999
Q ss_pred ceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHH
Q 022879 74 LCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKE 150 (290)
Q Consensus 74 ~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~ 150 (290)
.++++|+++++.+|+.+ ..+.|||+++.. ...+++++++|+|+|++|++++|+|+.+|++ +++++.++++. ..++.
T Consensus 145 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~ 223 (357)
T PLN02514 145 FVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEH 223 (357)
T ss_pred HeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHh
Confidence 99999999999999877 477889999866 4457999999998899999999999999995 66666666555 45567
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 230 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 230 (290)
+|++.+++... . ..+.+. ..++|++||++|.+..+..++++++++|+++.+|.......++...++.++++
T Consensus 224 ~Ga~~~i~~~~--~---~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 294 (357)
T PLN02514 224 LGADDYLVSSD--A---AEMQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKV 294 (357)
T ss_pred cCCcEEecCCC--h---HHHHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcE
Confidence 99987765321 1 233332 13699999999976788999999999999999997554445556667889999
Q ss_pred EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+++.. ..+++++++++++|++ ++.+ +.|++ +|+.+|++.+.+++..+|+++++
T Consensus 295 i~g~~~~~~~~~~~~~~~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 295 ITGSFIGSMKETEEMLEFCKEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred EEEEecCCHHHHHHHHHHHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence 9998766 4578999999999987 5555 56888 99999999999998889999874
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.8e-40 Score=253.48 Aligned_cols=251 Identities=28% Similarity=0.377 Sum_probs=216.2
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++||.|.+|+|+++|++|+++++||||... +.+|.|+|+..+|...++++|+
T Consensus 66 ytpGmEaaGvVvAvG~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe 117 (336)
T KOG1197|consen 66 YTPGMEAAGVVVAVGEGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPE 117 (336)
T ss_pred cCCCcccceEEEEecCCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCc
Confidence 589999999999999999999999999863 4679999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
.+++.+||.+ ....|||..+.. ..+++|++||+|.+ |++|+++.|++++.|+ .++++.++.+|++.+++-|+++.+
T Consensus 118 ~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I 196 (336)
T KOG1197|consen 118 AITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPI 196 (336)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCccee
Confidence 9999999866 588899998876 78999999999965 9999999999999999 688888999999999999999998
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeee
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFR 236 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~ 236 (290)
++ +.+|+.+++.+++ +++|+|+++|.+|. +.+...+.+|++.|.++.+|..+. ..+++...+..+.+.+.-...
T Consensus 197 ~y--~~eD~v~~V~kiT--ngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl 271 (336)
T KOG1197|consen 197 DY--STEDYVDEVKKIT--NGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSL 271 (336)
T ss_pred ec--cchhHHHHHHhcc--CCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhh
Confidence 85 4689999998884 78999999999997 789999999999999999997654 345566555555554443322
Q ss_pred --c---CC----cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 237 --Y---KN----TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 237 --~---~~----~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+ +. ...+++.++.+|.+ +..|.++|++ +++.+|+.+++++...||+++-
T Consensus 272 ~gYi~g~~el~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 272 LGYIDGEVELVSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred hcccCCHHHHHHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence 1 22 33467777888988 6778999999 9999999999999999999985
No 31
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.9e-38 Score=272.21 Aligned_cols=280 Identities=28% Similarity=0.496 Sum_probs=233.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..+++++|..+.+++. ..+|+|+||+.++.++++++|++
T Consensus 56 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~ 134 (339)
T PRK10083 56 VIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDA 134 (339)
T ss_pred ccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCC
Confidence 68999999999999999999999999999999999999999999999998766543 34799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
+++..++.+.++.++++++..++++++++|+|+|+|++|++++|+|+. +|++.++++++++++.++++++|++.++++.
T Consensus 135 ~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~ 214 (339)
T PRK10083 135 IADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA 214 (339)
T ss_pred CCHHHHhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 999888766677888876667889999999999999999999999996 6998788899999999999999999888743
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 240 (290)
..++.+.+.. .+.++|++||++|.+..+..++++++++|+++.+|.......+....+..+.+++.+.....+.
T Consensus 215 --~~~~~~~~~~----~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T PRK10083 215 --QEPLGEALEE----KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANK 288 (339)
T ss_pred --cccHHHHHhc----CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhh
Confidence 3445444421 2345679999999767889999999999999999965433233333445677777777655678
Q ss_pred HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEeC
Q 022879 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 290 (290)
Q Consensus 241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~~ 290 (290)
++++++++++|.+++.+.+++.|++ +++++|++.+.++ ...+|+++++
T Consensus 289 ~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 289 FPVVIDWLSKGLIDPEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred HHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence 9999999999999655456778888 9999999998865 4568999875
No 32
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-37 Score=267.87 Aligned_cols=282 Identities=57% Similarity=0.996 Sum_probs=237.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|..|+.++|++...++....+|+|++|+.++++.++++|++
T Consensus 57 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~ 136 (343)
T cd05285 57 VLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDN 136 (343)
T ss_pred ccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCC
Confidence 67999999999999999999999999999999999999999999999997655443345799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++.++++.+|+++++.+.+++++++||+|+|++|++++|+|+.+|++.++++.+++++.++++++|++.+++++.
T Consensus 137 ~~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 137 VSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred CCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 99999987777888998887789999999999988999999999999999965888888899999999999998887542
Q ss_pred Cccc---HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecC
Q 022879 162 NLQD---IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238 (290)
Q Consensus 162 ~~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 238 (290)
.+ +.+.+.++ ..++++|++|||+|+...+...+++++++|+++.+|.......++.....++.+++.+.....
T Consensus 217 --~~~~~~~~~~~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd05285 217 --EDTPESAEKIAEL--LGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA 292 (343)
T ss_pred --ccchhHHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh
Confidence 33 25556554 245679999999998658899999999999999998654333444456677888888876666
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEe
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN 289 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~ 289 (290)
+.+++++++++++.+.+.+.+.+.+++ +++.+|++.+.+++ ..+|++|.
T Consensus 293 ~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 293 NTYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred HHHHHHHHHHHcCCCCchHhEEEEEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence 788999999999987554556778888 99999999998874 56899873
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.1e-38 Score=274.40 Aligned_cols=268 Identities=23% Similarity=0.347 Sum_probs=213.3
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|.+ +|++||||++.+..+|+ |..| +..++|+...+.+. ..+|+|+||+.+++++++++|+
T Consensus 60 ~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 60 MALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred eeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCC
Confidence 37899999999998865 79999999998877766 4445 56788987766543 3579999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHh---cCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 81 NVSLEEGAMCEPLSVGVHACRR---ANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~---~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
++++++|+.+++++++++++.. ..+++|++|||.|+|++|++++|+++. +|...+++++.+++|++++++.+....
T Consensus 134 ~l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~ 213 (341)
T cd08237 134 NVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL 213 (341)
T ss_pred CCChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence 9999999888889999998853 456889999999999999999999996 665578889999999999987665422
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 233 (290)
++ + +. ...++|++||++|+ +..+..+++.++++|+++.+|.......++...++.+++++.+
T Consensus 214 ~~------~-------~~--~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g 278 (341)
T cd08237 214 ID------D-------IP--EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVG 278 (341)
T ss_pred hh------h-------hh--hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEE
Confidence 11 1 11 12369999999994 4578999999999999999997544445566667889999999
Q ss_pred eeec-CCcHHHHHHHHHcC---CCCCCCceeeEeeCC-hhhHHHHHHHHhcCCCceeEEEeC
Q 022879 234 VFRY-KNTWPLCLELLRSG---KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 234 ~~~~-~~~l~~~~~~~~~g---~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+... ..+++++++++++| ..++.+.+++.|+++ ++++.++++...++ ..||+||++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 279 SSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred ecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 8765 56799999999999 334578888888872 34666666666554 678999875
No 34
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.5e-37 Score=264.90 Aligned_cols=281 Identities=30% Similarity=0.581 Sum_probs=234.8
Q ss_pred ccccceeEEEEEeCCCCC--CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC-CCCcccceeEeecCC-ceEE
Q 022879 2 VIGHECAGVIEKVGSEVK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-PVHGSLANQVVHPAD-LCFK 77 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~e~~~v~~~-~~~~ 77 (290)
++|+|++|+|+++|++++ +|++||+|+..+..+|+.|.+|..+..+.|+....++.. ...|+|+||+.++++ .+++
T Consensus 65 ~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 144 (350)
T cd08256 65 IPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHK 144 (350)
T ss_pred ccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEE
Confidence 679999999999999999 999999999999999999999999999999876544331 246999999999988 5789
Q ss_pred CCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 78 LPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 78 ~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
+|+++++.+++.+.++.++|++++.++++++++|+|.|+|++|++++++|+++|+..++++++++++.++++++|++.++
T Consensus 145 lP~~~~~~~aa~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~ 224 (350)
T cd08256 145 VPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL 224 (350)
T ss_pred CCCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence 99999999888777888999998668899999999977799999999999999997788899999999999999998877
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhh-hccCcEEEEeee
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFR 236 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~ 236 (290)
++ ...++.+.+.++. .+.++|++||++|.+..+..++++++++|+++.+|.......++...+ ..+++++.+...
T Consensus 225 ~~--~~~~~~~~~~~~~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 300 (350)
T cd08256 225 NP--PEVDVVEKIKELT--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHL 300 (350)
T ss_pred cC--CCcCHHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEecc
Confidence 63 3456666666542 456799999999975678899999999999999986443333333333 356677777765
Q ss_pred cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 237 ~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
....++++++++++|.+++.+.+.+.|++ +++.+|++.+++++..+|+++
T Consensus 301 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 301 GPYCYPIAIDLIASGRLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CchhHHHHHHHHHcCCCChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence 56678999999999999654446778888 999999999999888889875
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.7e-37 Score=264.91 Aligned_cols=283 Identities=29% Similarity=0.409 Sum_probs=231.2
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc--ccCCCCCcccceeEeecCC--ceEE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--FATPPVHGSLANQVVHPAD--LCFK 77 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~e~~~v~~~--~~~~ 77 (290)
++|||++|+|+++|++++++++||+|+..+..+|++|..|..++.++|..... ......+|+|+||+.++.+ .+++
T Consensus 56 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~ 135 (351)
T cd08285 56 ILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAP 135 (351)
T ss_pred ccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEE
Confidence 68999999999999999999999999998878999999999999999987531 1112347999999999974 8999
Q ss_pred CCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 78 LPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 78 ~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
+|+++++.+++.+ ..+.|++++++.+.++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+
T Consensus 136 lP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~ 215 (351)
T cd08285 136 LPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI 215 (351)
T ss_pred CCCCCCHHHhhhhccchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceE
Confidence 9999999999877 578889999877889999999999889999999999999999778999999999999999999888
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc--cccchh--hhccCcEEE
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVV 232 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~~~~~i~ 232 (290)
+++. ..++.+.+.++. .+.++|++||++|++..+..++++++++|+++.+|...... .++... ...+..++.
T Consensus 216 v~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 291 (351)
T cd08285 216 VDYK--NGDVVEQILKLT--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTIN 291 (351)
T ss_pred ecCC--CCCHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEE
Confidence 8743 356666665543 45679999999998778899999999999999998654322 222111 234555666
Q ss_pred Eeeec--CCcHHHHHHHHHcCCCCCCC-ceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879 233 GVFRY--KNTWPLCLELLRSGKIDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 290 (290)
Q Consensus 233 ~~~~~--~~~l~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~ 290 (290)
+.... .+.++++++++++|++++.. .+.+.+++ +++++|++.+.+++ ...|++|.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 292 GGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred EeecCCccccHHHHHHHHHcCCCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence 55432 57899999999999996633 34445777 99999999999886 478999875
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=7.5e-37 Score=262.71 Aligned_cols=274 Identities=24% Similarity=0.389 Sum_probs=233.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|..|+.+.|.+....+. ..+|+|+||+.++++.++++|+
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~ 135 (333)
T cd08296 57 VPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPD 135 (333)
T ss_pred ccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCC
Confidence 689999999999999999999999998754 45799999999999999998876543 3479999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
++++.+++.+ ..+.++|++++...++++++|||+|+|++|++++++|+.+|+ .++++++++++.++++++|+++++++
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~ 214 (333)
T cd08296 136 DLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT 214 (333)
T ss_pred CCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence 9999988866 477889998877788999999999999999999999999999 58888899999999999999888764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 238 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 238 (290)
. ..++.+.++++ .++|++||++|.+..+...+++++++|+++.+|......+++...++.+++++.+.... .
T Consensus 215 ~--~~~~~~~~~~~-----~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 287 (333)
T cd08296 215 S--KEDVAEALQEL-----GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTA 287 (333)
T ss_pred C--CccHHHHHHhc-----CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCH
Confidence 3 34565555543 36999999997667889999999999999999976544455555667899999998754 5
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+++.++++++++.+ .+.+ +.|++ +++.+|++.+.+++.+||+|++
T Consensus 288 ~~~~~~~~~~~~~~l--~~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 288 LDSEDTLKFSALHGV--RPMV-ETFPL--EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHhCCC--CceE-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence 678889999988887 4444 57888 9999999999999889999885
No 37
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.4e-36 Score=261.77 Aligned_cols=280 Identities=39% Similarity=0.674 Sum_probs=232.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceEE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK 77 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~ 77 (290)
++|+|++|+|+++|+++++|++||+|++.+..+|++|.+|..|+.+.|+.+..++.. ..+|+|+||+.++++++++
T Consensus 56 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 135 (339)
T cd08232 56 VLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVP 135 (339)
T ss_pred ecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEE
Confidence 679999999999999999999999999999999999999999999999987655421 2579999999999999999
Q ss_pred CCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 78 LPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 78 ~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
+|+++++.+|+.+.+++++|+++......++++|||.|+|.+|++++|+|+.+|++.++++++++++.+++++++.+.++
T Consensus 136 iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi 215 (339)
T cd08232 136 LPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETV 215 (339)
T ss_pred CcCCCCHHHhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEE
Confidence 99999999998766888899988764333899999998899999999999999996688888889988899999998887
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
+++. .+ +.++. ....++|++||+.|+...+...+++|+++|+++.+|........+...++.+.+++.+....
T Consensus 216 ~~~~--~~----~~~~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08232 216 NLAR--DP----LAAYA-ADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF 288 (339)
T ss_pred cCCc--hh----hhhhh-ccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC
Confidence 7532 22 22221 13356999999999766788999999999999999854432233334456677888777666
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++.++++++++.+++.+.+.+.+++ +++++|++.+.+++..+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 DDEFAEAVRLLAAGRIDVRPLITAVFPL--EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCCchhheeEEecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence 6678999999999998666667778888 99999999998888899999875
No 38
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.7e-36 Score=263.38 Aligned_cols=281 Identities=28% Similarity=0.477 Sum_probs=231.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCC--------------------CC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VH 61 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 61 (290)
++|||++|+|+++|++++++++||+|++.+...|++|.+|+.+++++|+....++..+ ..
T Consensus 56 i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T cd05279 56 ILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGT 135 (365)
T ss_pred ccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCcccccccc
Confidence 7899999999999999999999999999988899999999999999998765442111 24
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
|+|++|+.++++.++++|+++++.+++.++ .+.++|+++.. +.++++++|||+|+|++|++++++|+.+|++.+++++
T Consensus 136 g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~ 215 (365)
T cd05279 136 STFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVD 215 (365)
T ss_pred ccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 799999999999999999999999998775 78899988754 7899999999998899999999999999997788888
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhc-cCCEEEEeccCC--CC
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-AGGKVCLVGMGH--HE 216 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~ 216 (290)
+++++.++++++|++.+++....+.++.+.++++. ++++|++||++|....+..++++++ ++|+++.+|... ..
T Consensus 216 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 292 (365)
T cd05279 216 INKDKFEKAKQLGATECINPRDQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTE 292 (365)
T ss_pred CCHHHHHHHHHhCCCeecccccccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCc
Confidence 89999999999999888764432225656666553 4689999999987678889999999 999999998643 23
Q ss_pred ccccchhhhccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 217 MTVPLTPAAVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 217 ~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
..++...+ .+..++.|.+. ..+.+.+++++++++.+++.+...+.+++ +++.+|++.+.+++. .|++++
T Consensus 293 ~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~ 365 (365)
T cd05279 293 ATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT 365 (365)
T ss_pred eeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence 34444445 56777777643 25778999999999998765567788888 999999999887644 577663
No 39
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.3e-36 Score=266.79 Aligned_cols=280 Identities=22% Similarity=0.254 Sum_probs=234.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|++++.+++||+|++.+..+|+.|..|..+.+++|+....+|....+|+|++|+.+++.+++++|++
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~ 163 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH 163 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence 67999999999999999999999999999999999999999999999998888887667899999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
+++.+++.+ ..+.|||+++.. ++++++++|+|+|+ |++|++++++++.+|++ ++++++++++.++++++|++.+
T Consensus 164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~ 242 (393)
T cd08246 164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGV 242 (393)
T ss_pred CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEE
Confidence 999998866 588899999853 57899999999997 99999999999999995 6677889999999999999888
Q ss_pred EecCCCc--------------------ccHHHHHHHHHHHhCC-CccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879 157 VKVSTNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 157 ~~~~~~~--------------------~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
++++..+ ..+.+.+.+++ ++. ++|++||++|. ..+..++++++++|+++.+|....
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 319 (393)
T cd08246 243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTG 319 (393)
T ss_pred EcccccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCC
Confidence 8753211 12344444442 445 79999999996 678899999999999999985432
Q ss_pred -CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEe
Q 022879 216 -EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 289 (290)
Q Consensus 216 -~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~ 289 (290)
...++...+..++.++.+.+.. .+.+++++++++++.+. +.+++.|++ +++++|++.+.++ +..+|+++-
T Consensus 320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRID--PCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCce--eeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence 2234455566778888887655 45788999999999884 446778888 9999999999988 788898863
No 40
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3e-37 Score=261.96 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=200.5
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|+++ +|++||||++. +..|..|.. +..|+|+||+.++++.++++|+
T Consensus 60 ~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 60 LVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDP 119 (308)
T ss_pred ccCcceeEEEEEEecCCC-CCCCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCC
Confidence 479999999999999998 59999999873 222332211 1359999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
+++++. +.+++.+|||+++... ..+++++||+|+|++|++++|+|+.+|++.+++++.++++++.+..+ .++++.
T Consensus 120 ~~~~~~-a~~~~~~~a~~~~~~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~ 194 (308)
T TIGR01202 120 ALGPQG-ALLALAATARHAVAGA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPE 194 (308)
T ss_pred CCCHHH-HhhhHHHHHHHHHHhc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChh
Confidence 999754 5556678999998764 34688999999999999999999999997777788888777766543 233311
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CC
Q 022879 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 239 (290)
++ .+.++|++|||+|.+..+..+++.++++|+++.+|.......++...++.+++++.+...+ .+
T Consensus 195 ---~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 260 (308)
T TIGR01202 195 ---KD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPG 260 (308)
T ss_pred ---hc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchh
Confidence 00 2457999999999877889999999999999999976544456666778888999887765 57
Q ss_pred cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 240 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+++++++++++|++++.+.+++.|+| +|+++|++.+.++...+|++|+
T Consensus 261 ~~~~~~~l~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 261 DLHAVRELIESGALSLDGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHcCCCChhhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 79999999999999888889999998 9999999998777677899874
No 41
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.2e-36 Score=267.83 Aligned_cols=271 Identities=24% Similarity=0.364 Sum_probs=217.5
Q ss_pred ccccceeEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC----ceE
Q 022879 2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCF 76 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~ 76 (290)
++|||++|+|+++|++++ +|++||||++.+...|+.|..|.. ++ ...+|+|+||+.++++ .++
T Consensus 65 i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g-~~~~G~~aey~~v~~~~~~~~~~ 132 (410)
T cd08238 65 ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG-----------YS-YTYPGGLATYHIIPNEVMEQDCL 132 (410)
T ss_pred eeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC-----------cc-ccCCCcceEEEEecHHhccCCeE
Confidence 789999999999999998 699999999988888888877621 11 1347999999999987 689
Q ss_pred ECCCCCChhhhhhhhhhHHH---HHHH---------HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCC
Q 022879 77 KLPDNVSLEEGAMCEPLSVG---VHAC---------RRANIGPETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVD 141 (290)
Q Consensus 77 ~~P~~~~~~~aa~~~~~~ta---~~~l---------~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~ 141 (290)
++|+++++.+|+.+.+++++ +.++ +.+++++|++|+|+|+ |++|++++|+|+++| +..+++++.+
T Consensus 133 ~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~ 212 (410)
T cd08238 133 LIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVN 212 (410)
T ss_pred ECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCC
Confidence 99999999999876444333 3322 2367889999999975 999999999999985 4468999999
Q ss_pred hhHHHHHHHc--------CCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879 142 DYRLSVAKEI--------GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 142 ~~~~~~~~~l--------g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
++|.++++++ |++ .++++. ..+++.+.+++++ .+.++|++||++|.+..+..++++++++|+++.++.
T Consensus 213 ~~r~~~a~~~~~~~~~~~Ga~~~~i~~~-~~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g 289 (410)
T cd08238 213 DERLARAQRLFPPEAASRGIELLYVNPA-TIDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAG 289 (410)
T ss_pred HHHHHHHHHhccccccccCceEEEECCC-ccccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEc
Confidence 9999999997 655 344432 1245666666653 466899999999987889999999999998887753
Q ss_pred C-CC--CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 213 G-HH--EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 213 ~-~~--~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
. .. ...++...++.+++++.|++.. ..+++++++++++|++++.+.+++.|++ +++++|++.+. ++..||+||
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl 366 (410)
T cd08238 290 PVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLI 366 (410)
T ss_pred cCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEE
Confidence 2 21 2355666788899999998765 5689999999999999888889999999 99999999998 667899998
Q ss_pred eC
Q 022879 289 NL 290 (290)
Q Consensus 289 ~~ 290 (290)
.+
T Consensus 367 ~~ 368 (410)
T cd08238 367 YT 368 (410)
T ss_pred EC
Confidence 64
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3e-36 Score=259.87 Aligned_cols=276 Identities=28% Similarity=0.489 Sum_probs=234.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++.+|++||+|+..++.+|+.|..|..|..++|+...+.+. +.+|+|++|+.+++++++++|++
T Consensus 60 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 60 TLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred ecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCC
Confidence 67999999999999999999999999999999999999999999999999988876 67899999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~--~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
+++++++.++ .+.|||+++.. ..+.++++|||+|+|++|++++++|+.+| . .++++.+++++.+.++++|.++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 9999998774 78899999865 36889999999999779999999999999 6 577888889999999999998887
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
+++ .. +.+.++++. .+.++|+++|++|........+++++++|+++.+|.... ..++....+.+++++.+....
T Consensus 218 ~~~--~~-~~~~i~~~~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 218 NAS--DD-VVEEVRELT--GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred cCC--cc-HHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecc
Confidence 743 23 666666542 446799999999976788899999999999999986543 233334445688888876543
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...++.+++++++|.+.+ . .+.|++ +++++|++.+.+++..+|+++.+
T Consensus 292 ~~~~~~~~~~~l~~g~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 TRAELVEVVALAESGKVKV--E-ITKFPL--EDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred cHHHHHHHHHHHHhCCCCc--c-eEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence 667899999999998843 3 356788 99999999999988889999864
No 43
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=3.6e-36 Score=263.08 Aligned_cols=283 Identities=30% Similarity=0.484 Sum_probs=232.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc------------C-------CCCCc
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA------------T-------PPVHG 62 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-------~~~~g 62 (290)
++|||++|+|+++|++++++++||+|++.+..+|++|++|..+.+++|+.+.... . ...+|
T Consensus 57 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 136 (386)
T cd08283 57 ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAG 136 (386)
T ss_pred cccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCC
Confidence 6899999999999999999999999999988899999999999999999754321 0 12369
Q ss_pred ccceeEeecCC--ceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 63 SLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 63 ~~~e~~~v~~~--~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
+|+||++++++ .++++|+++++.+|+.+ ..+.+||+++..++++++++|||+|+|.+|++++++|+..|...+++++
T Consensus 137 ~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~ 216 (386)
T cd08283 137 GQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAID 216 (386)
T ss_pred eeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 99999999988 89999999999999977 4788999999668899999999998899999999999999986689999
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCC---------------------HHHHHHH
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGL---------------------NKTMSTA 197 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~ 197 (290)
.++++.+++++++...++++. .. ++.+.++++. .+.++|++||++|+ ...+..+
T Consensus 217 ~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (386)
T cd08283 217 RVPERLEMARSHLGAETINFE--EVDDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA 292 (386)
T ss_pred CCHHHHHHHHHcCCcEEEcCC--cchHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHH
Confidence 999999999998544565533 23 3666666552 45579999999975 2367889
Q ss_pred HHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHH
Q 022879 198 LGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275 (290)
Q Consensus 198 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 275 (290)
+++++++|+++.+|.... ...++...++.+++++.+.... .+.++.++++++++.+.+.+.+.+.+++ +++++|++
T Consensus 293 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~ 370 (386)
T cd08283 293 IQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYK 370 (386)
T ss_pred HHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHH
Confidence 999999999999986543 2233444566788888887554 5678999999999998655556677888 99999999
Q ss_pred HHhcCC-CceeEEEeC
Q 022879 276 TSARGG-TAIKVMFNL 290 (290)
Q Consensus 276 ~~~~~~-~~gk~vl~~ 290 (290)
.+.+++ ..+|++|+.
T Consensus 371 ~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 371 IFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHhCCCCeEEEEecC
Confidence 988875 568999864
No 44
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=7.2e-36 Score=259.91 Aligned_cols=283 Identities=26% Similarity=0.431 Sum_probs=227.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc--------------------CCCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------------TPPVH 61 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 61 (290)
++|||++|+|+++|++++.+++||+|++.+..+|++|.+|..++++.|+.....+ .....
T Consensus 63 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (373)
T cd08299 63 ILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGT 142 (373)
T ss_pred cccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCC
Confidence 7899999999999999999999999999888999999999999999998653211 01135
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~ 139 (290)
|+|+||+.+++++++++|+++++.+++.++ .+.++|+++. .+.++++++|||+|+|++|++++++++.+|++.+++++
T Consensus 143 G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~ 222 (373)
T cd08299 143 STFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVD 222 (373)
T ss_pred CcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 899999999999999999999999999775 8889998864 47899999999998899999999999999996688888
Q ss_pred CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHh-ccCCEEEEeccCCCCcc
Q 022879 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMT 218 (290)
Q Consensus 140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~ 218 (290)
+++++.+.++++|++.+++.....+++...+.++. ++++|+++|++|.+..+..++..+ +++|+++.+|.......
T Consensus 223 ~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~ 299 (373)
T cd08299 223 INKDKFAKAKELGATECINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQN 299 (373)
T ss_pred CCHHHHHHHHHcCCceEecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCce
Confidence 99999999999999888875432334556666553 257999999999767777766655 57899999996543223
Q ss_pred ccchh-hhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 219 VPLTP-AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 219 ~~~~~-~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
++... .+.++.++.+.+.. ...+.++++.+.++.+++.+.+++.|++ +++.+|++.+.+++ ..|+++++
T Consensus 300 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~-~~k~~~~~ 373 (373)
T cd08299 300 LSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGK-SIRTVLTF 373 (373)
T ss_pred eecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCC-cceEEEeC
Confidence 33333 23456777776543 2567778888888877666677888888 99999999988764 45888764
No 45
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.8e-36 Score=257.30 Aligned_cols=280 Identities=32% Similarity=0.595 Sum_probs=231.8
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|++++++++||+|++.+..+|+.|..|..+++|+|+...+.+ .+.+|+|++|+.++.++++++|+
T Consensus 59 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~ 137 (341)
T PRK05396 59 MVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPD 137 (341)
T ss_pred cccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcC
Confidence 36899999999999999999999999999999999999999999999999865444 34679999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
++++.+++.+.++.++++++.. ...++++|+|+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 138 DIPDDLAAIFDPFGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CCCHHHhHhhhHHHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 9999988866676777665533 346899999998899999999999999996678888899999999999999887643
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--C
Q 022879 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--K 238 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~ 238 (290)
..++.+.++++. .++++|++|||.|....+..++++++++|+++.+|.......++...+.++++++.+.... .
T Consensus 217 --~~~~~~~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 292 (341)
T PRK05396 217 --KEDLRDVMAELG--MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMF 292 (341)
T ss_pred --cccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCcc
Confidence 345666666552 4578999999999877889999999999999999865544444455677788888776532 3
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+..++++++++ +++.+.+.+.+++ +++++|++.+.+++ .+|++++|
T Consensus 293 ~~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 293 ETWYKMSALLQSG-LDLSPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred chHHHHHHHHHcC-CChhHheEEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence 4566788999998 4445557778888 99999999998876 79999875
No 46
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1e-35 Score=260.16 Aligned_cols=281 Identities=30% Similarity=0.513 Sum_probs=231.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|++.+..+|+.|++|..+++++|..+...|. ..+|+|++|+.++++.++++|++
T Consensus 90 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~ 168 (384)
T cd08265 90 VIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINEL 168 (384)
T ss_pred ccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCcc
Confidence 57999999999999999999999999999999999999999999999998776554 34799999999999999999986
Q ss_pred -------CChhhhhhhhhhHHHHHHHH-h-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 022879 82 -------VSLEEGAMCEPLSVGVHACR-R-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 152 (290)
Q Consensus 82 -------~~~~~aa~~~~~~ta~~~l~-~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg 152 (290)
++...|+.+.++++||+++. . .+++++++|||+|+|++|++++++|+.+|+..++++++++++.++++++|
T Consensus 169 ~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g 248 (384)
T cd08265 169 REIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMG 248 (384)
T ss_pred ccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence 45565555578889999984 3 68899999999988999999999999999966888888889999999999
Q ss_pred CCEEEecCCC-cccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879 153 ADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 230 (290)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 230 (290)
+++++++... ..++.+.+.++. .+.++|+++|++|.+ ..+..++++|+++|+++.+|.......++...+..+..+
T Consensus 249 ~~~~v~~~~~~~~~~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 326 (384)
T cd08265 249 ADYVFNPTKMRDCLSGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQ 326 (384)
T ss_pred CCEEEcccccccccHHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceE
Confidence 9888775432 225666666653 456899999999963 467889999999999999986543333344456667778
Q ss_pred EEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 231 VVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 231 i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
+.+.... ...+++++++++++.+.+...+++.|++ +++++|++.+.++ ..+|+|+
T Consensus 327 l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 327 IVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred EEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence 8877653 5579999999999998654456778888 9999999997665 6788875
No 47
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.7e-35 Score=255.68 Aligned_cols=283 Identities=33% Similarity=0.575 Sum_probs=234.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP 79 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P 79 (290)
++|||++|+|+++|++++++++||+|++.+...|++|.+|..+..+.|....+..+...+|+|++|+.++++ .++++|
T Consensus 57 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp 136 (345)
T cd08286 57 ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLP 136 (345)
T ss_pred eecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECC
Confidence 679999999999999999999999999999899999999999999999876554333457999999999987 899999
Q ss_pred CCCChhhhhhh-hhhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 80 DNVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 80 ~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
++++..+++.+ ..+++||.++ ...++++++++||+|+|++|++++|+++.+|...++++++++++.++++++|++.++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v 216 (345)
T cd08286 137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV 216 (345)
T ss_pred CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence 99999998877 5778899865 347889999999998899999999999999944688898999999999999998888
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
++. ..++...+.++. .+.++|++||++|....+..+++.++++|+++.+|.......++...++.+++++.+....
T Consensus 217 ~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08286 217 NSA--KGDAIEQVLELT--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD 292 (345)
T ss_pred ccc--cccHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc
Confidence 743 345666666553 4567999999999877888999999999999999965444445555556788888775444
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC--CceeEEEeC
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL 290 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~gk~vl~~ 290 (290)
...++.++++++++.+.+.+.+++++++ ++++++++.+.+.. ...|++|++
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 TNTTPMLLKLVSSGKLDPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hhhHHHHHHHHHcCCCChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence 4678889999999998665556788888 99999999988753 456999875
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.5e-36 Score=261.83 Aligned_cols=281 Identities=21% Similarity=0.248 Sum_probs=232.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|++++++++||+|++.+..+|++|++|..+++++|+.+...+....+|+|+||+.+++++++++|++
T Consensus 80 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~ 159 (398)
T TIGR01751 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKH 159 (398)
T ss_pred ecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCC
Confidence 68999999999999999999999999999999999999999999999998766665556899999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
+++.+++.+ ..+.+||+++.. ++++++++++|+|+ |++|++++++++++|++ +++++.++++.+.++++|++.+
T Consensus 160 l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~ 238 (398)
T TIGR01751 160 LTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAV 238 (398)
T ss_pred CCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEE
Confidence 999999866 488889998753 67889999999998 99999999999999995 6667788889999999999988
Q ss_pred EecCCCc--------------------ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-
Q 022879 157 VKVSTNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH- 215 (290)
Q Consensus 157 ~~~~~~~--------------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~- 215 (290)
++++..+ ..+...+.++ +.++++|++|||+|. ..+...+++++++|+++.+|....
T Consensus 239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~ 315 (398)
T TIGR01751 239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGY 315 (398)
T ss_pred ecCCCcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCC
Confidence 8753210 1123333333 245689999999996 678899999999999999986543
Q ss_pred CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 216 EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 216 ~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...++...++.++.++.+.... .+.+++++++++++.+. +.+++++++ ++++++++.+.+++..+|+|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 316 NHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRID--PTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred CCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcc--cceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 2344455566677777776544 34578899999999884 446778888 99999999999988889999864
No 49
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.4e-35 Score=255.59 Aligned_cols=280 Identities=34% Similarity=0.623 Sum_probs=232.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|+..++..|+.|++|..++.++|++.++++. ...|+|++|+.++++.++++|++
T Consensus 58 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~ 136 (340)
T TIGR00692 58 VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKS 136 (340)
T ss_pred ccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCC
Confidence 68999999999999999999999999999999999999999999999999876643 35799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++..++.+.++.++++++ .....++++++|+|+|++|++++|+++.+|.+.++++++++++.++++++|++.++++
T Consensus 137 ~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~-- 213 (340)
T TIGR00692 137 IPPEYATIQEPLGNAVHTV-LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNP-- 213 (340)
T ss_pred CChHhhhhcchHHHHHHHH-HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcc--
Confidence 9987776666788888876 3456789999998889999999999999999657888888999999999998877764
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch-hhhccCcEEEEeeec--C
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--K 238 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~ 238 (290)
...++.+.+.++. .++++|++||++|....+...+++|+++|+++.+|.......++.. .+.++.+++.+.... .
T Consensus 214 ~~~~~~~~l~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T TIGR00692 214 FKEDVVKEVADLT--DGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMF 291 (340)
T ss_pred cccCHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCch
Confidence 3356666666542 4568999999999767888999999999999999865332233333 456677777776532 4
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+.+++++++++.+++.+.+.+.+++ +++.++++.+.+++ .+|+|++|
T Consensus 292 ~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 292 ETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeeeH--HHHHHHHHHHhcCC-CceEEEeC
Confidence 567889999999999654556777888 99999999998876 49999986
No 50
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.3e-35 Score=254.77 Aligned_cols=280 Identities=31% Similarity=0.506 Sum_probs=231.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc---CCCCCcccceeEeecCC--ceE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCF 76 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~e~~~v~~~--~~~ 76 (290)
++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|+.++.+.|++...+| ....+|+|++|+.++++ .++
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 135 (344)
T cd08284 56 VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLL 135 (344)
T ss_pred ccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceE
Confidence 5799999999999999999999999999998999999999999999998765542 22346999999999975 999
Q ss_pred ECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879 77 KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155 (290)
Q Consensus 77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 155 (290)
++|+++++.+++.+ ..+.|||+++....+.++++|||+|+|.+|++++++|+.+|+..++++++++++.++++++|+.
T Consensus 136 ~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~- 214 (344)
T cd08284 136 KLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE- 214 (344)
T ss_pred ECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-
Confidence 99999999999876 5889999999777888999999998899999999999999975688888889999999999975
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEe
Q 022879 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~ 234 (290)
.++ ....++...+.++. .++++|++||++|.+..+...+++++++|+++.+|... ..........+.+++++.+.
T Consensus 215 ~~~--~~~~~~~~~l~~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 215 PIN--FEDAEPVERVREAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred EEe--cCCcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEe
Confidence 344 33356666666653 45689999999997678899999999999999999654 22233334456677777654
Q ss_pred eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
... .+.+++++++++++.+.+.+.+.+.+++ ++++++++.+.+++. +|+|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 291 RCPVRSLFPELLPLLESGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred cCCcchhHHHHHHHHHcCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence 333 6789999999999998654456677888 999999999888766 999986
No 51
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.8e-35 Score=254.06 Aligned_cols=280 Identities=38% Similarity=0.662 Sum_probs=236.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc-----eE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CF 76 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~-----~~ 76 (290)
++|+|++|+|+++|++++.|++||+|++.++.+|+.|++|..+..++|+...+++. ...|+|++|+.+++.+ ++
T Consensus 56 ~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~ 134 (343)
T cd08235 56 ILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVL 134 (343)
T ss_pred ccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEE
Confidence 67999999999999999999999999999999999999999999999998877654 4679999999999999 99
Q ss_pred ECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 77 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 77 ~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
++|+++++.+|+.+.++.+|+++++...++++++|||+|+|.+|++++++|+..|.+.++++++++++.+.++.++.+.+
T Consensus 135 ~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~ 214 (343)
T cd08235 135 KLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYT 214 (343)
T ss_pred ECCCCCCHHHHHhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEE
Confidence 99999999999877778889999876789999999999889999999999999999648888889999898889998887
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEe
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~ 234 (290)
++++ +.++.+.+++.. .+.++|++||+++....+...+++++++|+++.++..... ..+......++.+++.+.
T Consensus 215 ~~~~--~~~~~~~i~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (343)
T cd08235 215 IDAA--EEDLVEKVRELT--DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS 290 (343)
T ss_pred ecCC--ccCHHHHHHHHh--CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEE
Confidence 7643 456666666543 4567999999999766888999999999999999854322 233345566788888776
Q ss_pred eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
... .+.++.++++++++.+.+.+.+...+++ +++.++++.+.+++ .+|+|++
T Consensus 291 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 291 YAASPEDYKEALELIASGKIDVKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ecCChhhHHHHHHHHHcCCCChHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence 655 5678899999999988644446677888 99999999999988 8899874
No 52
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.9e-35 Score=256.89 Aligned_cols=278 Identities=31% Similarity=0.488 Sum_probs=227.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC----------------------CC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PP 59 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 59 (290)
++|+|++|+|+++|+++++|++||+|++.+. .|++|.+|+.++.++|.+...+.. ..
T Consensus 58 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (365)
T cd08278 58 VLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFF 136 (365)
T ss_pred ccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccc
Confidence 6899999999999999999999999999765 899999999999999986543210 11
Q ss_pred CCcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879 60 VHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI 137 (290)
Q Consensus 60 ~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~ 137 (290)
..|+|++|+.+++.+++++|+++++.+++.+ ..+.+|+.++. ...++++++|||+|+|++|++++|+|+++|++.+++
T Consensus 137 ~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~ 216 (365)
T cd08278 137 GQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIA 216 (365)
T ss_pred cccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 2589999999999999999999999988877 47888888874 477899999999988999999999999999977999
Q ss_pred EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--C
Q 022879 138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--H 215 (290)
Q Consensus 138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~ 215 (290)
+++++++.++++++|++.++++ ...++.+.+.+.. +.++|+++||+|.+..+..+++.++++|+++.+|... .
T Consensus 217 ~~~~~~k~~~~~~~g~~~~i~~--~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 291 (365)
T cd08278 217 VDIVDSRLELAKELGATHVINP--KEEDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGA 291 (365)
T ss_pred EeCCHHHHHHHHHcCCcEEecC--CCcCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCC
Confidence 9999999999999999888764 3356666666653 5679999999997678899999999999999999652 2
Q ss_pred CccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 216 EMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 216 ~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
...++...+..+++.+.+.... .+.+++++++++++.+.+.+.+ ..+++ +++++|++.+.+++ ..|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~-~~k~~~~ 365 (365)
T cd08278 292 EVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGK-VIKPVLR 365 (365)
T ss_pred ccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCC-ceEEEEC
Confidence 3345555555778888776532 4567889999999988443333 46777 99999999998874 4588874
No 53
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.4e-35 Score=254.89 Aligned_cols=283 Identities=31% Similarity=0.504 Sum_probs=229.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCC--ceEE
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFK 77 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~--~~~~ 77 (290)
++|+|++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+..++|+..... .+...+|+|++|++++++ ++++
T Consensus 57 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 136 (347)
T cd05278 57 ILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAK 136 (347)
T ss_pred eeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEE
Confidence 689999999999999999999999999999999999999999999999876532 222357999999999987 8999
Q ss_pred CCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879 78 LPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156 (290)
Q Consensus 78 ~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 156 (290)
+|+++++.+++.+ ..+.|||+++...+++++++|||+|+|.+|++++|+|+.+|...++++++++++.++++++|++.+
T Consensus 137 lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~v 216 (347)
T cd05278 137 IPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI 216 (347)
T ss_pred CCCCCCHHHHhhhcchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEE
Confidence 9999999999877 478899999866788999999998889999999999999997568888888999999999998888
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc-cchhhhccCcEEEEee
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVF 235 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~ 235 (290)
+++. ..++.+.+++.. .++++|++||++|+...+...+++|+++|+++.+|........ .....+.+++.+.+..
T Consensus 217 i~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
T cd05278 217 INPK--NGDIVEQILELT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL 292 (347)
T ss_pred EcCC--cchHHHHHHHHc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence 7743 345666665542 4568999999999756889999999999999999854332211 1112235566666543
Q ss_pred ec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879 236 RY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 290 (290)
Q Consensus 236 ~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~~ 290 (290)
.. .+.+++++++++++.+.+.+.+...+++ ++++++++.+..++. .+|+|++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 293 VPVRARMPELLDLIEEGKIDPSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred cCchhHHHHHHHHHHcCCCChhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence 33 5678999999999998654445677788 999999999887766 68998863
No 54
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=5.6e-35 Score=251.58 Aligned_cols=280 Identities=39% Similarity=0.701 Sum_probs=232.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|..+++|+|......+ .+..|+|++|+.++++ ++++|++
T Consensus 56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~ 133 (337)
T cd08261 56 ILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEG 133 (337)
T ss_pred ccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCC
Confidence 5799999999999999999999999999888899999999999999996443333 2346999999999999 9999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++.++.+.+++++++..+++++++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++++++++++.
T Consensus 134 ~~~~~aa~~~~~~~a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~- 211 (337)
T cd08261 134 LSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG- 211 (337)
T ss_pred CCHHHhhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc-
Confidence 999999877777888888866889999999999889999999999999999 578887889999999999999988754
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CCc
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT 240 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 240 (290)
..++.+.+.+.. .+.++|++||++|+...+..++++++++|+++.+|.......++...+..+.+++.+.... .+.
T Consensus 212 -~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (337)
T cd08261 212 -DEDVAARLRELT--DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATRED 288 (337)
T ss_pred -ccCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhh
Confidence 345666666543 4567999999998767889999999999999999865433334444455677777765433 567
Q ss_pred HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEeC
Q 022879 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 290 (290)
Q Consensus 241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~~ 290 (290)
++++++++++|.+.+.+.+...+++ +++.++++.+.++ ...+|+|+++
T Consensus 289 ~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 289 FPDVIDLLESGKVDPEALITHRFPF--EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHcCCCChhhheEEEeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence 8999999999999553246677888 9999999999988 4779999875
No 55
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.2e-35 Score=252.76 Aligned_cols=272 Identities=30% Similarity=0.488 Sum_probs=220.9
Q ss_pred ccccceeEEEEEeCCCCCC-CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|+|++|+|+++|+++++ |++||+|++.+..+|+.|..|..+.. ....|+|+||+.++.++++++|+
T Consensus 66 ~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~ 134 (341)
T cd08262 66 VLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPD 134 (341)
T ss_pred ccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCC
Confidence 5799999999999999987 99999999999999999999954321 12469999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
++++.+++.+..+++||+++..++++++++|||+|+|++|++++|+++.+|++.++++++++++.++++++|++++++++
T Consensus 135 ~~s~~~a~~~~~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~ 214 (341)
T cd08262 135 GLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPA 214 (341)
T ss_pred CCCHHHhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCC
Confidence 99999888656888999887668899999999998899999999999999998788888899999999999998887754
Q ss_pred CCcc--cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 161 TNLQ--DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 161 ~~~~--~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
.... .+. .+.+. ..+.++|++||++|.+..+..++++++++|+++.+|.......+.......+++++.+....
T Consensus 215 ~~~~~~~~~-~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08262 215 ADSPFAAWA-AELAR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYT 291 (341)
T ss_pred CcCHHHHHH-HHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEeccc
Confidence 3211 121 22222 34567999999999755778899999999999999865332222222234577777765544
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+.++++++++++|.+.+.+.+.+.+++ ++++++++.+.+++..+|+|++
T Consensus 292 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 PEEFADALDALAEGKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence 4578999999999999765566788888 9999999999999889999874
No 56
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.1e-35 Score=253.72 Aligned_cols=279 Identities=27% Similarity=0.421 Sum_probs=233.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++++++||+|++.+...|+.|..|+.++.++|....+.+. ...|+|++|+.++.++++++|++
T Consensus 69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~ 147 (350)
T cd08240 69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGG 147 (350)
T ss_pred ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCC
Confidence 57999999999999999999999999999999999999999999999987655543 36799999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.+||+++.. ....++++|||+|+|++|++++|+|+.+|++.++++++++++.+.++++|++.+++.
T Consensus 148 ~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 227 (350)
T cd08240 148 LDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227 (350)
T ss_pred CCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence 999999876 578899999876 445689999999889999999999999999778888899999999999998877663
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 238 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 238 (290)
...++.+.+.+.. .+ ++|++||++|.+..+..++++|+++|+++.+|........+...+.++++++.+.... .
T Consensus 228 --~~~~~~~~~~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 302 (350)
T cd08240 228 --SDPDAAKRIIKAA--GG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSL 302 (350)
T ss_pred --CCccHHHHHHHHh--CC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCH
Confidence 3345555555442 33 7999999999767889999999999999999865443334444556688888887655 4
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+++..++++++++.+++ .....+++ +++++|++.+.+++..+|+++++
T Consensus 303 ~~~~~~~~ll~~~~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 303 EELRELVALAKAGKLKP--IPLTERPL--SDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHHHHHHHHHcCCCcc--ceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence 67889999999998843 34567788 99999999999888889999864
No 57
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=6.2e-35 Score=249.49 Aligned_cols=268 Identities=29% Similarity=0.489 Sum_probs=225.6
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|+|++|+|+++|++ +++||+|...+..+|++|.+|..+..+.|......+....+|+|++|+.+++++++++|+
T Consensus 52 ~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~ 128 (319)
T cd08242 52 GVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPD 128 (319)
T ss_pred CccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcC
Confidence 36899999999999998 789999999999999999999999999999877665434579999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
++++.+++.+.++++++.+++..+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++.
T Consensus 129 ~~~~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~ 207 (319)
T cd08242 129 LVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDE 207 (319)
T ss_pred CCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcc
Confidence 99999888655566777777778899999999998899999999999999995 88888889999999999988776542
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 240 (290)
. . +.+.++|++||++|....+...+++++++|+++..+.......++...+..++.++.+.... .
T Consensus 208 ~--~-----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~ 272 (319)
T cd08242 208 A--E-----------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--P 272 (319)
T ss_pred c--c-----------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--c
Confidence 1 0 24567999999999867888999999999999987754444445555567788888876543 3
Q ss_pred HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+++++++++++.+++.+.+.+.|++ +++++|++.+.++. .+|+|++.
T Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 273 FAPALRLLRKGLVDVDPLITAVYPL--EEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHHHHcCCCChhhceEEEEeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 8899999999999766667888888 99999999998764 58999863
No 58
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=9.2e-35 Score=252.53 Aligned_cols=280 Identities=33% Similarity=0.523 Sum_probs=227.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---------------cC----CCCCc
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHG 62 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g 62 (290)
++|+|++|+|+++|+++++|++||+|++.+..+|++|++|+.++.++|...... |. ....|
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 135 (363)
T cd08279 56 VLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLG 135 (363)
T ss_pred cccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCc
Confidence 689999999999999999999999999999999999999999999999865321 00 02469
Q ss_pred ccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879 63 SLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140 (290)
Q Consensus 63 ~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~ 140 (290)
+|++|+.++++.++++|+++++.+++.++ .+.+||.++. ...++++++|||+|+|++|++++++|+.+|++.++++++
T Consensus 136 ~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~ 215 (363)
T cd08279 136 TFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDP 215 (363)
T ss_pred cceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcC
Confidence 99999999999999999999999998774 6788888864 478899999999977999999999999999965888889
Q ss_pred ChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccc
Q 022879 141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMT 218 (290)
Q Consensus 141 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~ 218 (290)
++++.++++++|++++++. ...++...+.++. .+.++|++||+++....+...+++++++|+++.+|.... ...
T Consensus 216 ~~~~~~~~~~~g~~~vv~~--~~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 291 (363)
T cd08279 216 VPEKLELARRFGATHTVNA--SEDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVS 291 (363)
T ss_pred CHHHHHHHHHhCCeEEeCC--CCccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccc
Confidence 9999999999999887764 3346666666553 356799999999976788999999999999999986442 233
Q ss_pred ccchhhhccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEE
Q 022879 219 VPLTPAAVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287 (290)
Q Consensus 219 ~~~~~~~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v 287 (290)
++...+..+...+.+... ..+.+++++++++++.+.+.+.+.+++++ +++++|++.+.+++..+.++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 292 LPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence 444445556666666532 25678999999999998655556777888 99999999998876554433
No 59
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.8e-35 Score=252.76 Aligned_cols=282 Identities=31% Similarity=0.526 Sum_probs=234.5
Q ss_pred ccccceeEEEEEeCCCCCC---CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC---------------------
Q 022879 2 VIGHECAGVIEKVGSEVKT---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------- 57 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 57 (290)
++|||++|+|+.+|+++++ |++||+|++.+..+|+.|.+|..+.+++|++...|..
T Consensus 56 ~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (367)
T cd08263 56 VLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY 135 (367)
T ss_pred ccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc
Confidence 6899999999999999988 9999999999889999999999999999997542211
Q ss_pred CCCCcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879 58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRI 135 (290)
Q Consensus 58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~v 135 (290)
...+|+|++|+.+++++++++|+++++.+++.+ ..+.|||+++.. ..+.+++++||+|+|.+|++++++|+.+|++.+
T Consensus 136 ~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~v 215 (367)
T cd08263 136 MYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPI 215 (367)
T ss_pred cccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeE
Confidence 023699999999999999999999999999877 478899999865 677899999999889999999999999999668
Q ss_pred EEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879 136 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 136 v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
+++++++++.++++++|++.+++++ ..++.+.+++.. .+.++|++||++++......++++++++|+++.++....
T Consensus 216 i~~~~s~~~~~~~~~~g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (367)
T cd08263 216 IAVDVRDEKLAKAKELGATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG 291 (367)
T ss_pred EEEeCCHHHHHHHHHhCCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 8888899999999999998888743 456666666543 456799999999985478899999999999999986442
Q ss_pred --CccccchhhhccCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 216 --EMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 216 --~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
...+....++.+++++.+.... .+.+++++++++++.+.+.+.+++.+++ +++.++++.+.+++..||+|+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 292 GATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence 2234444455678888776543 3678999999999998655556777888 9999999999998888999874
No 60
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1e-34 Score=250.26 Aligned_cols=279 Identities=33% Similarity=0.584 Sum_probs=230.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.+++||+|++.+..+|+.|.+|..+.+|+|+..+..+ ....|+|++|+.+++++++++|++
T Consensus 60 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 60 IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG-VDTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred ccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEe-ccCCCcceEEEEechHHcEECcCC
Confidence 6799999999999999999999999999988999999999999999998765444 345799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
++++.++++.++.++++++. ...+++++|||+|+|++|++++++++.+|.+.++++++++++.++++++|.+++++++
T Consensus 139 ~~~~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~- 216 (341)
T cd05281 139 IPPEIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR- 216 (341)
T ss_pred CCHHHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc-
Confidence 99876666678888888775 3457899999998899999999999999986577888899999999999998877632
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch-hhhccCcEEEEeeec--C
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--K 238 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~ 238 (290)
..++. .+.++. .++++|++||++|.......++++|+++|+++.+|.......++.. ....+++++.+.... .
T Consensus 217 -~~~~~-~~~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd05281 217 -EEDVV-EVKSVT--DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMF 292 (341)
T ss_pred -cccHH-HHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcc
Confidence 34555 555543 4568999999998777888999999999999999865433233322 356677777776533 4
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.++++++++.++.+.+.+.+...+++ +++++|++.+.+++ .+|+|++.
T Consensus 293 ~~~~~~~~~l~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 293 ETWYQVSALLKSGKVDLSPVITHKLPL--EDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred hhHHHHHHHHHcCCCChhHheEEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence 568889999999998655666677788 99999999999888 89999863
No 61
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-34 Score=250.65 Aligned_cols=280 Identities=29% Similarity=0.490 Sum_probs=230.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP 79 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P 79 (290)
++|||++|+|+++|++++.+++||+|++....+|+.|.+|..++.+.|.+....+ ...+|+|+||+.++.+ .++++|
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP 134 (345)
T cd08287 56 PIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVP 134 (345)
T ss_pred ccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECC
Confidence 6899999999999999999999999998667789999999999999999876655 3578999999999975 999999
Q ss_pred CCCChhhhhh-----h-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879 80 DNVSLEEGAM-----C-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153 (290)
Q Consensus 80 ~~~~~~~aa~-----~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 153 (290)
+++++..+.. + ..+++|++++..+.++++++++|+|+|++|++++|+|+.+|++.++++++++++.++++++|+
T Consensus 135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga 214 (345)
T cd08287 135 GSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGA 214 (345)
T ss_pred CCCChhhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9998722211 1 357788888877888999999998889999999999999999778999889999999999999
Q ss_pred CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 233 (290)
+.++++. ..++.+.+.+.. .+.++|+++|++|++..+..++++++++|+++.+|.......++....+.+++.+.+
T Consensus 215 ~~v~~~~--~~~~~~~i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 215 TDIVAER--GEEAVARVRELT--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAG 290 (345)
T ss_pred ceEecCC--cccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEE
Confidence 8888753 345656665542 456899999999877788999999999999999986543334444455678888877
Q ss_pred eeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 234 VFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 234 ~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.... .+.+++++++++++.+++.+.+.+.+++ +++++|++.+.+.+. .|++|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 291 GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred ecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence 5444 6689999999999998654456677888 999999999887644 599886
No 62
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1e-34 Score=249.91 Aligned_cols=273 Identities=24% Similarity=0.394 Sum_probs=227.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCCc
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADL 74 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~ 74 (290)
++|||++|+|+++|+++++|++||+|++ .....|++|++|+.++.++|+++.+.. +...+|+|+||+.+++++
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 135 (337)
T cd05283 56 VPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF 135 (337)
T ss_pred ccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh
Confidence 6899999999999999999999999984 344589999999999999999876542 223479999999999999
Q ss_pred eEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879 75 CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153 (290)
Q Consensus 75 ~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 153 (290)
++++|+++++.+++.+ ..+.+||++++...++++++++|.|+|.+|++++++++.+|+ .++++++++++.++++++|+
T Consensus 136 ~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~ 214 (337)
T cd05283 136 VFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGA 214 (337)
T ss_pred eEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCC
Confidence 9999999999998876 477889999877778999999998889999999999999999 68888888899999999998
Q ss_pred CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 233 (290)
+.+++.. ..++. +. .++++|++|||+|.......++++++++|+++.+|.......++...++.+++++.+
T Consensus 215 ~~vi~~~--~~~~~---~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 285 (337)
T cd05283 215 DEFIATK--DPEAM---KK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAG 285 (337)
T ss_pred cEEecCc--chhhh---hh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEE
Confidence 8877632 22221 11 246799999999985458899999999999999996544334555556778999998
Q ss_pred eeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 234 VFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 234 ~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.... .++++.+++++++++++ +.+ +.+++ +++++|++.+.+++..+|+|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 286 SLIGGRKETQEMLDFAAEHGIK--PWV-EVIPM--DGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ecccCHHHHHHHHHHHHhCCCc--cce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence 8765 56789999999999884 333 57888 9999999999999888999874
No 63
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.6e-34 Score=248.21 Aligned_cols=280 Identities=31% Similarity=0.499 Sum_probs=232.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP 79 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P 79 (290)
++|+|++|+|+.+|++++.|++||+|+..+..+|++|.+|+.|..++|.++...+. ..+|+|++|+.+++. +++++|
T Consensus 57 ~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP 135 (345)
T cd08260 57 VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLP 135 (345)
T ss_pred eeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECC
Confidence 57999999999999999999999999986667899999999999999999754333 347999999999985 899999
Q ss_pred CCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 80 DNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 80 ~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
+++++.+++.++ .+.+||+++. ..++.++++++|+|+|++|++++++|+.+|+ .++++.+++++.+.++++|++.++
T Consensus 136 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i 214 (345)
T cd08260 136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATV 214 (345)
T ss_pred CCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEE
Confidence 999999888774 7889999985 4788999999999999999999999999999 578888889999999999998888
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC---ccccchhhhccCcEEEEe
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~ 234 (290)
+++. ..++...+.++. .+ ++|++||++|........+++++++|+++.+|..... ..++...+..+.+++.+.
T Consensus 215 ~~~~-~~~~~~~~~~~~--~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08260 215 NASE-VEDVAAAVRDLT--GG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGS 290 (345)
T ss_pred cccc-chhHHHHHHHHh--CC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeC
Confidence 7432 145666665543 33 7999999999767888999999999999999864322 234444455778888887
Q ss_pred eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
... ...+++++++++++.+.+.+.+.+.+++ +++++|++.+.+++..+|+|++
T Consensus 291 ~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 291 HGMPAHRYDAMLALIASGKLDPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CcCCHHHHHHHHHHHHcCCCChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence 654 6678999999999988654446677888 9999999999998888998874
No 64
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=9.8e-34 Score=244.45 Aligned_cols=279 Identities=39% Similarity=0.682 Sum_probs=230.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.|++||+|++.+..+|+.|.+|..+..+.|+.....+. ...|+|++|+.+++++++++|++
T Consensus 55 ~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~ 133 (343)
T cd08236 55 VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDH 133 (343)
T ss_pred ccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCC
Confidence 57999999999999999999999999999988999999999999999988765554 36799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++.++.+.+||+++....++++++|||+|+|.+|++++|+|+.+|++.++++++++++.++++.+|.+.+++++.
T Consensus 134 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~ 213 (343)
T cd08236 134 VDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE 213 (343)
T ss_pred CCHHHHHhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc
Confidence 99999988777889999987778899999999988999999999999999965888888888999999999888877542
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc---cchhhhccCcEEEEeeec-
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~- 237 (290)
.. .+.+.+. ..+.++|++|||+|....+..++++|+++|+++.+|.......+ +...++.++..+.+....
T Consensus 214 --~~-~~~~~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (343)
T cd08236 214 --ED-VEKVREL--TEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSY 288 (343)
T ss_pred --cc-HHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecc
Confidence 33 4455444 24567999999998767888999999999999999855433222 223345677777776543
Q ss_pred -----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhc-CCCceeEEE
Q 022879 238 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF 288 (290)
Q Consensus 238 -----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vl 288 (290)
.+.++++.++++++.+.+.+.+...+++ +++.++++.+.+ +...+|+|+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 289 SAPFPGDEWRTALDLLASGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccccchhhHHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence 4568889999999988543446677788 999999999998 666788875
No 65
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.8e-34 Score=243.59 Aligned_cols=277 Identities=39% Similarity=0.631 Sum_probs=231.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|+++++|++||+|+..+...|+.|.+|..+++++|....+++. +..|+|++|+.+++++++++|++
T Consensus 55 ~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~ 133 (334)
T cd08234 55 VPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDN 133 (334)
T ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCC
Confidence 68999999999999999999999999999999999999999999999999876543 35799999999999999999999
Q ss_pred CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879 82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 161 (290)
+++.+++.+..+.+++++++.+++++++++||+|+|.+|++++++|+.+|++.++++++++++.+.++++|.+.+++++.
T Consensus 134 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 213 (334)
T cd08234 134 LSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR 213 (334)
T ss_pred CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC
Confidence 99999887677778888886688999999999988999999999999999965888889999999999999887776432
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEeeecCC
Q 022879 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRYKN 239 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~ 239 (290)
.++... + ...++++|++||++|.+......+++++++|+++.+|..... ..+....+..+++.+.+......
T Consensus 214 --~~~~~~--~--~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (334)
T cd08234 214 --EDPEAQ--K--EDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPY 287 (334)
T ss_pred --CCHHHH--H--HhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHH
Confidence 333333 1 234578999999998767888999999999999999865432 22332334457778877766566
Q ss_pred cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 240 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.+++++++++++.+.+.+.+++++++ +++.++++.+.+ +..+|+|+
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence 78999999999998655556677888 999999999998 78889886
No 66
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.8e-34 Score=246.13 Aligned_cols=248 Identities=18% Similarity=0.213 Sum_probs=202.7
Q ss_pred cccc--ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc--eEE
Q 022879 2 VIGH--ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK 77 (290)
Q Consensus 2 i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~ 77 (290)
++|+ |++|+|..+|+++++|++||+|+. .|+|+||+.+++.. +.+
T Consensus 75 ~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~ 123 (348)
T PLN03154 75 VPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRK 123 (348)
T ss_pred CCCCeeEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEE
Confidence 6787 889999999999999999999984 26899999998753 544
Q ss_pred --CCCCCChh-hhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H
Q 022879 78 --LPDNVSLE-EGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E 150 (290)
Q Consensus 78 --~P~~~~~~-~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~ 150 (290)
+|+++++. +|+.+ ..+.|||+++.. +.+++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++ +
T Consensus 124 ~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~ 202 (348)
T PLN03154 124 IQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK 202 (348)
T ss_pred ccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh
Confidence 48999986 56555 588899999854 78999999999988 9999999999999999 5888889999999887 7
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-----cccchhh
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPA 224 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~ 224 (290)
+|++.++++.. ..++.+.++++. ++++|++||++|+ ..+..++++++++|+++.+|..... . .++...+
T Consensus 203 lGa~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 277 (348)
T PLN03154 203 LGFDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNL 277 (348)
T ss_pred cCCCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHH
Confidence 99999988532 235666665542 3589999999996 6889999999999999999964322 1 1233456
Q ss_pred hccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 225 AVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 225 ~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+++++.|.+.. .+.++++++++++|++ ++.+...|+| +++++|++.+.+++..||+||++
T Consensus 278 ~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 278 ISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred hhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 7788999887643 3457889999999999 4556667888 99999999999999999999974
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.3e-33 Score=243.07 Aligned_cols=277 Identities=31% Similarity=0.558 Sum_probs=233.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++++++||+|+..+..+|+.|..|+.++.++|......+ .+.+|+|++|+.++.+.++++|++
T Consensus 59 ~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~ 137 (338)
T cd08254 59 TLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPG-LGIDGGFAEYIVVPARALVPVPDG 137 (338)
T ss_pred eccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccc-cccCCcceeeEEechHHeEECCCC
Confidence 5799999999999999999999999999998999999999999999997654433 356799999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.+||+++.. ..++++++|||.|+|.+|++++++|+.+|+ .++++++++++.+.++.+|.+.++..
T Consensus 138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~ 216 (338)
T cd08254 138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS 216 (338)
T ss_pred CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence 999998877 588999998865 678999999998889999999999999999 58888899999999999998887763
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 238 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 238 (290)
. ...+.+.+ + ...++++|+++|++|....+..++++|+++|+++.+|.......++...+..++..+.+.+.. .
T Consensus 217 ~--~~~~~~~~-~--~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (338)
T cd08254 217 L--DDSPKDKK-A--AGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTP 291 (338)
T ss_pred C--CcCHHHHH-H--HhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCH
Confidence 3 33444444 2 235678999999998777889999999999999999865544445555667788888877655 6
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.++.++++++++.+.+. .+.+++ ++++++++.+.+++..+|+|+++
T Consensus 292 ~~~~~~~~ll~~~~l~~~---~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 292 EDLPEVLDLIAKGKLDPQ---VETRPL--DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHcCCCccc---ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 788999999999998543 456777 99999999999998889999875
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.7e-33 Score=242.76 Aligned_cols=278 Identities=29% Similarity=0.446 Sum_probs=233.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|+|++|+|+++|++++.|++||+|+..+ ...|+.|.+|..++.++|+.....+. ...|+|++|+.++++.++++|+
T Consensus 59 ~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~ 137 (341)
T cd08297 59 IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPD 137 (341)
T ss_pred cCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCC
Confidence 579999999999999999999999999875 45789999999999999998876654 4579999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
++++.+++.+ ..+.|||+++...++++++++||+|+ +.+|++++++|+++|+ .++++.+++++.+.++++|++.+++
T Consensus 138 ~~~~~~~a~l~~~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 138 GLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCCHHHHHHHHcchHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999998866 57889999987778899999999987 7799999999999999 5888889999999999999988877
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 237 (290)
+. ..++.+.+.++. .++++|++||+.+....+..++++++++|+++.+|..... ..++...++.+++.+.+....
T Consensus 217 ~~--~~~~~~~~~~~~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FK--KSDDVEAVKELT--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CC--CccHHHHHHHHh--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC
Confidence 53 336666666542 4578999999877768889999999999999999865432 234444456788888875543
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.+++++++++++.+. +.+ ..|++ +++.++++.+..+...+|++++|
T Consensus 293 ~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 TRQDLQEALEFAARGKVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CHHHHHHHHHHHHcCCCc--cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 57789999999999884 333 46777 99999999999988899999975
No 69
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.1e-33 Score=243.62 Aligned_cols=277 Identities=26% Similarity=0.469 Sum_probs=226.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|||++|+|+++|+++++|++||+|++.+ ..+|+.|..|..+..++|......+. ..+|+|+||+.++..+++++|+
T Consensus 56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~ 134 (338)
T PRK09422 56 ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPE 134 (338)
T ss_pred cCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCC
Confidence 689999999999999999999999999754 34799999999999999987765443 4579999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
++++.+++.+ ..+.|||++++.+.++++++|||+|+|++|++++++++. +|+ .++++++++++.++++++|++.+++
T Consensus 135 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 213 (338)
T PRK09422 135 GLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN 213 (338)
T ss_pred CCCHHHeehhhcchhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence 9999999877 477899999877889999999999999999999999998 599 5888889999999999999988876
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
++. ..++.+.+++. .+ ++|+++.+.+.+..+..++++++++|+++.+|.......++...+..+...+.+....
T Consensus 214 ~~~-~~~~~~~v~~~---~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (338)
T PRK09422 214 SKR-VEDVAKIIQEK---TG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGT 288 (338)
T ss_pred ccc-cccHHHHHHHh---cC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCC
Confidence 421 23455555544 23 6885555555567899999999999999999865443344445566678888776543
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++.+++++++|.+. +.+. .+++ +++++|++.+.+++..+|+++++
T Consensus 289 ~~~~~~~~~l~~~g~l~--~~v~-~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 289 RQDLEEAFQFGAEGKVV--PKVQ-LRPL--EDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred HHHHHHHHHHHHhCCCC--ccEE-EEcH--HHHHHHHHHHHcCCccceEEEec
Confidence 56788999999999883 3443 5677 99999999999998889999864
No 70
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.1e-33 Score=244.96 Aligned_cols=281 Identities=27% Similarity=0.426 Sum_probs=226.1
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc---------ccCCCCCcccceeEeec
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHP 71 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~e~~~v~ 71 (290)
+++|||++|+|+++|++++.+++||+|+..+..+|+.|..|..++.++|....+ .+..+.+|+|+||+.++
T Consensus 55 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~ 134 (375)
T cd08282 55 LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVP 134 (375)
T ss_pred ceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEee
Confidence 368999999999999999999999999999999999999999999999976421 11223469999999999
Q ss_pred CC--ceEECCCCCChhh---hhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 022879 72 AD--LCFKLPDNVSLEE---GAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL 145 (290)
Q Consensus 72 ~~--~~~~~P~~~~~~~---aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~ 145 (290)
.. +++++|+++++.+ ++.+ ..++++|+++..++++++++|+|+|+|++|++++|+++.+|+..++++++++++.
T Consensus 135 ~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~ 214 (375)
T cd08282 135 YADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERL 214 (375)
T ss_pred cccCcEEECCCCCChhhhhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 76 8999999999984 4544 5788999999668899999999998899999999999999986677899999999
Q ss_pred HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH-----------HHHHHHHHhccCCEEEEeccCC
Q 022879 146 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK-----------TMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 146 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
++++++|+. .+++ ..+++.+.+.++. ++++|++|||+|.+. .+..++++++++|+++.+|...
T Consensus 215 ~~~~~~g~~-~v~~--~~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~ 288 (375)
T cd08282 215 DLAESIGAI-PIDF--SDGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV 288 (375)
T ss_pred HHHHHcCCe-Eecc--CcccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence 999999984 4443 3356666666553 257999999999742 4788999999999999887532
Q ss_pred CC-------------ccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC
Q 022879 215 HE-------------MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280 (290)
Q Consensus 215 ~~-------------~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 280 (290)
.. ..++...++.++..+.+.... .+.++.+++++.++.+.+...+.+.+++ ++++++++.+.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~ 366 (375)
T cd08282 289 AEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKR 366 (375)
T ss_pred CcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcC
Confidence 11 122334455667766665543 5678889999999999654457888888 9999999999988
Q ss_pred CCceeEEEeC
Q 022879 281 GTAIKVMFNL 290 (290)
Q Consensus 281 ~~~gk~vl~~ 290 (290)
+ .+|+|+++
T Consensus 367 ~-~~kvvv~~ 375 (375)
T cd08282 367 L-ETKVVIKP 375 (375)
T ss_pred C-ceEEEeCC
Confidence 7 88999864
No 71
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.7e-34 Score=243.91 Aligned_cols=272 Identities=27% Similarity=0.444 Sum_probs=226.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.+++||+|++.+..+|+.|.+|..+..++|+...+++. ..+|+|++|+.++.++++++|++
T Consensus 57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~ 135 (334)
T PRK13771 57 ILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPN 135 (334)
T ss_pred eccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCC
Confidence 57999999999999999889999999998888999999999999999998877654 45799999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.++ .+.++|+++....++++++++|+|+ |.+|++++++++.+|+ .++++++++++.+.++.+ ++.+++.
T Consensus 136 ~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~ 213 (334)
T PRK13771 136 VSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG 213 (334)
T ss_pred CCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence 9999988774 7888999887668889999999988 9999999999999999 578888889998988888 6655542
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccchhhhccCcEEEEeeec
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~ 237 (290)
+ ++.+.++++ .++|++||++|+ .....+++.++++|+++.+|....... ........+++++.+....
T Consensus 214 ~----~~~~~v~~~-----~~~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T PRK13771 214 S----KFSEEVKKI-----GGADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA 283 (334)
T ss_pred h----hHHHHHHhc-----CCCcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC
Confidence 1 344444432 269999999997 578899999999999999996433222 3333345677888776544
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.+++++++++++.+ .+.+.+.+++ +++++|++.+.+++..+|++++.
T Consensus 284 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKI--KPVIGAEVSL--SEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCC--cceEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence 6678999999999988 4456678888 99999999999887889998863
No 72
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.1e-33 Score=239.47 Aligned_cols=249 Identities=19% Similarity=0.251 Sum_probs=202.0
Q ss_pred ccccceeEEEEEeCCCCCC-CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|||++|+|+++|+++++ |++||+|++.+. .+|+|+||+.++++.++++|+
T Consensus 63 v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~ 115 (324)
T cd08291 63 PPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPD 115 (324)
T ss_pred CCCcceEEEEEEECCCccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCC
Confidence 6899999999999999996 999999986321 149999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE-CC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~-Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 157 (290)
++++.+++.+ ..+.|||.+++.... ++++++|+ |+ |++|++++|+|+.+|+ .++++++++++.++++++|+++++
T Consensus 116 ~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i 193 (324)
T cd08291 116 GVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVL 193 (324)
T ss_pred CCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 9999998855 466678766555554 56667665 55 9999999999999999 588888999999999999999988
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-cccchhhhccCcEEEEee
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-TVPLTPAAVREVDVVGVF 235 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~ 235 (290)
++. .+++.+.++++. .++++|++||++|+ ......+.+++++|+++.+|..... . .++...++.+++++.+.+
T Consensus 194 ~~~--~~~~~~~v~~~~--~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08291 194 NSS--DPDFLEDLKELI--AKLNATIFFDAVGG-GLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFW 268 (324)
T ss_pred ECC--CccHHHHHHHHh--CCCCCcEEEECCCc-HHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEE
Confidence 743 457777776653 45689999999997 4667789999999999999864322 2 244555677888888876
Q ss_pred ec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 236 RY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 236 ~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.. .+.+++++++++ +.+ ++.+++.|++ +|+.+|++.+.+++..||+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 269 LTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence 43 235778888887 766 6778889999 9999999999998889999873
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.1e-32 Score=236.76 Aligned_cols=272 Identities=32% Similarity=0.556 Sum_probs=224.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++.|++||+|++....+|++|.+|..+.+++|+....++ ....|+|++|+.++...++++|++
T Consensus 57 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~ 135 (332)
T cd08259 57 ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDN 135 (332)
T ss_pred eccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCC
Confidence 5799999999999999999999999999999999999999999999999875544 355799999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++++++.+ ..+.+||++++.+.+++++++||+|+ |.+|++++++++..|. .++++.+++++.+.++.++.+.+++.
T Consensus 136 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 214 (332)
T cd08259 136 VSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG 214 (332)
T ss_pred CCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999988876 48889999987788899999999987 9999999999999999 57777788888888888888776653
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~- 237 (290)
. ++.+.+.+. .++|++++++|. ......++.++++|+++.++...... .+.......++..+.+....
T Consensus 215 ~----~~~~~~~~~-----~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
T cd08259 215 S----KFSEDVKKL-----GGADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISAT 284 (332)
T ss_pred H----HHHHHHHhc-----cCCCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCC
Confidence 2 144444432 279999999997 46788999999999999998644321 22333344567776666443
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+.+++++++++++.+ .+.+.+.+++ +++.+|++.+.+++..+|++++
T Consensus 285 ~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKI--KPVIDRVVSL--EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCC--ccceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence 5678899999999988 4456778888 9999999999998888999874
No 74
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3.3e-32 Score=234.48 Aligned_cols=278 Identities=30% Similarity=0.503 Sum_probs=228.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|+++++|++||+|++.++.+|+.|.+|..+.+++|+...+.|. ...|+|++|+.++++.++++|++
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 60 ILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred ecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCC
Confidence 57999999999999999999999999999999999999999999999998755543 45799999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.++ .+.++++++.. ..+.++++++|+|+ +.+|++++++++..|+ .++.++.++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999888774 67889988754 78899999999988 7999999999999999 5778888888888888888776665
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 237 (290)
....++...+.+. ..+.++|++++++|. ..+...++.++++|+++.++..... ..+.....+.+++.+.+....
T Consensus 218 --~~~~~~~~~~~~~--~~~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 --YRKEDFVREVREL--TGKRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred --cCChHHHHHHHHH--hCCCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC
Confidence 3334555555443 234679999999996 6788999999999999999854332 233333456677777776654
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...+.+++++++++.+ .+.+++.|++ +++++|++.+.++...+|+++++
T Consensus 293 ~~~~~~~~~~~l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 TKAELDEALRLVFRGKL--KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred CHHHHHHHHHHHHcCCc--ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 5578889999999987 4456777888 99999999998887789999864
No 75
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.5e-32 Score=233.46 Aligned_cols=265 Identities=24% Similarity=0.350 Sum_probs=219.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|||++|+|+++|+++.++++||+|++.+ ..+|+.|.+|..+.+++|+.+.+.+. ..+|+|++|+.++.+.++++|+
T Consensus 61 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 61 IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCC
Confidence 689999999999999999999999998743 35789999999999999999887765 3579999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
++++.+++.+ ..+.+||+++..+++++++++||+|+|++|++++++++..|+ .++++..++++.+.++++|++.+++.
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 218 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDS 218 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEecc
Confidence 9999998866 588899999966889999999999889999999999999999 58888888899999999998777654
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~- 237 (290)
... .++++|+++++.+....+..++++++++|+++.+|...... .++.. .+.+...+.+....
T Consensus 219 ~~~--------------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 283 (329)
T cd08298 219 DDL--------------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLT 283 (329)
T ss_pred Ccc--------------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCC
Confidence 321 23579999998776678899999999999999988532211 12222 23455566665544
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.+.++.++++++++.+++ . .+.|++ +++++|++.+++++..+|+|+
T Consensus 284 ~~~~~~~~~l~~~~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 RQDGEEFLKLAAEIPIKP--E-VETYPL--EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHHHHcCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence 556888999999998843 3 467888 999999999999888899874
No 76
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-32 Score=236.37 Aligned_cols=267 Identities=22% Similarity=0.320 Sum_probs=213.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|++.+..+|+.|..|. .+..++. ..+|+|++|+.++++.++++|++
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~ 150 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSP 150 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCC
Confidence 57999999999999999999999999998877777766532 1222221 23699999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.++|+++....+++++++||+|+ |++|++++++|+++|++ +++++.++ +.+.++++|++.+.+
T Consensus 151 ~~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~- 227 (350)
T cd08274 151 LSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVIL- 227 (350)
T ss_pred CCHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEe-
Confidence 999988876 58889999987788999999999998 99999999999999995 66776655 788888999865443
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~- 237 (290)
.....+.+ .+ .+.+.++|++||++|+ ..+..++++++++|+++.+|..... ..++...++.+++++.+....
T Consensus 228 -~~~~~~~~--~~--~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
T cd08274 228 -RDAPLLAD--AK--ALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT 301 (350)
T ss_pred -CCCccHHH--HH--hhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC
Confidence 22223322 22 2356789999999997 6889999999999999999854332 344555567788888887665
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.+++++++++++.+ .+.+.+.+++ +++.++++.+.+++..+|+++++
T Consensus 302 ~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 REVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 5678999999999988 4446677778 99999999999888889999864
No 77
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.2e-32 Score=234.39 Aligned_cols=264 Identities=27% Similarity=0.415 Sum_probs=215.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|+..+..+|++|.+|..++.++|+...+++. ...|+|++|+.++++.++++|++
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~ 135 (325)
T cd08264 57 IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDS 135 (325)
T ss_pred ecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCC
Confidence 57999999999999999999999999999999999999999999999998776653 35799999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.++ .+.+||+++..++++++++++|+|+ |++|++++++|+.+|++ +++++ +.+.++++|++.+++.
T Consensus 136 ~~~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~ 210 (325)
T cd08264 136 ISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDY 210 (325)
T ss_pred CCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecc
Confidence 9999998774 6778999987788999999999998 99999999999999995 66664 2366678998877753
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
+ ++.+.++++. +++|+++|++|. ..+...+++++++|+++.+|... ....++...+..+..++.+....
T Consensus 211 ~----~~~~~l~~~~----~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T cd08264 211 D----EVEEKVKEIT----KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT 281 (325)
T ss_pred h----HHHHHHHHHh----CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC
Confidence 2 2234454442 579999999996 68899999999999999998642 22344555566677777776554
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeE
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 286 (290)
++.+++++++++... ..+.+.|++ +++++|++.+.+++..+|+
T Consensus 282 ~~~~~~~~~l~~~~~----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 RKELLELVKIAKDLK----VKVWKTFKL--EEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHHcCC----ceeEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence 567888999986433 235577888 9999999999887776665
No 78
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.6e-32 Score=235.80 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=191.5
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
+++|||++|+|+++|+++++|++||+|+.. .++|+||++++++.++++|+
T Consensus 70 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------~~~~ae~~~v~~~~~~~iP~ 119 (345)
T cd08293 70 LSQVLDGGGVGVVEESKHQKFAVGDIVTSF------------------------------NWPWQTYAVLDGSSLEKVDP 119 (345)
T ss_pred CCCceEeeEEEEEeccCCCCCCCCCEEEec------------------------------CCCceeEEEecHHHeEEcCc
Confidence 368999999999999999999999999852 15799999999999999999
Q ss_pred CCChhh-----hhhhhhhHHHHHHHHh-cCCCCC--CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 022879 81 NVSLEE-----GAMCEPLSVGVHACRR-ANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE- 150 (290)
Q Consensus 81 ~~~~~~-----aa~~~~~~ta~~~l~~-~~~~~~--~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~- 150 (290)
++++.+ ++...++.|||+++.. ++++++ ++|||+|+ |++|++++|+|+++|++.++++++++++.+++++
T Consensus 120 ~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~ 199 (345)
T cd08293 120 QLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE 199 (345)
T ss_pred cccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence 864432 2333578899999854 677776 99999987 9999999999999999558888889999888876
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Cccc--cc----
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMTV--PL---- 221 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~--~~---- 221 (290)
+|++.++++. .+++.+.++++. ++++|++||++|+ ..+..++++++++|+++.+|.... +... ..
T Consensus 200 lGa~~vi~~~--~~~~~~~i~~~~---~~gvd~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 273 (345)
T cd08293 200 LGFDAAINYK--TDNVAERLRELC---PEGVDVYFDNVGG-EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEAT 273 (345)
T ss_pred cCCcEEEECC--CCCHHHHHHHHC---CCCceEEEECCCc-HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchh
Confidence 9999988753 457777776652 3689999999997 467899999999999999984321 1111 11
Q ss_pred hhhh-ccCcEEEEeee--c----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 222 TPAA-VREVDVVGVFR--Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 222 ~~~~-~~~~~i~~~~~--~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
..+. .+.+....... . .+.++++++++++|.+++. ....+++ +++++|++.+.+++..||+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 274 EAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence 1111 22333322211 1 2346778899999998543 3344577 99999999999988889999975
No 79
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.2e-31 Score=229.72 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=205.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|++.+ ..|+|++|+.+++..++++|++
T Consensus 61 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 61 IGGSEAVGVVDAVGEGVKGLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCcceEEEEEEeCCCCCCCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCC
Confidence 589999999999999999999999999631 2589999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.++ .+.++|++++.++++++++|||+|+ |.+|++++|+|+.+|+ .++++..++++.+.++.+|.+.++++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVST 191 (324)
T ss_pred CCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 9999998764 6678888887788999999999987 9999999999999999 56777777777888888998887764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
...++.+.++++ +.+.++|++||++|+ .....++++++++|+++.+|... ....++...+..++.++.+....
T Consensus 192 --~~~~~~~~i~~~--~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08292 192 --EQPGWQDKVREA--AGGAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR 266 (324)
T ss_pred --CCchHHHHHHHH--hCCCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence 345676667665 356789999999998 57789999999999999998643 22334444466788888876543
Q ss_pred ----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 238 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 238 ----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
...++++++++++|.+++ .+.+.|++ +++.+|++.+.+++..+|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 267 WSQEMSVEYRKRMIAELLTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence 236888999999999853 34567888 9999999999888788898863
No 80
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.2e-31 Score=229.62 Aligned_cols=245 Identities=21% Similarity=0.265 Sum_probs=196.1
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEEC--
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL-- 78 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~-- 78 (290)
.|+|.|++|+|+++|+ .|++||+|+.. ++|++|+.++.+++.++
T Consensus 59 ~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------------------------------~~~~~~~~~~~~~~~~l~~ 104 (325)
T TIGR02825 59 TMMGQQVARVVESKNV---ALPKGTIVLAS-------------------------------PGWTSHSISDGKDLEKLLT 104 (325)
T ss_pred cEecceEEEEEEeCCC---CCCCCCEEEEe-------------------------------cCceeeEEechhheEEccc
Confidence 3789999999999874 59999999852 46899999999988877
Q ss_pred --CCCCChhhh-hhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 022879 79 --PDNVSLEEG-AMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 152 (290)
Q Consensus 79 --P~~~~~~~a-a~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg 152 (290)
|+++++++| +.+ .++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|
T Consensus 105 ~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lG 183 (325)
T TIGR02825 105 EWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLG 183 (325)
T ss_pred cccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence 899999887 445 57899999974 488999999999986 9999999999999999 5888888999999999999
Q ss_pred CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-----Ccc--ccchhhh
Q 022879 153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMT--VPLTPAA 225 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~ 225 (290)
++.+++++. ..++.+.+++. .++++|++||++|+ ..+..++++++++|+++.+|.... ... .....++
T Consensus 184 a~~vi~~~~-~~~~~~~~~~~---~~~gvdvv~d~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 258 (325)
T TIGR02825 184 FDVAFNYKT-VKSLEETLKKA---SPDGYDCYFDNVGG-EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVI 258 (325)
T ss_pred CCEEEeccc-cccHHHHHHHh---CCCCeEEEEECCCH-HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHh
Confidence 999887542 12444444443 34689999999997 577899999999999999985431 111 1223456
Q ss_pred ccCcEEEEeeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 226 VREVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 226 ~~~~~i~~~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
++.+++.+.... .+.++++++++++|++++. +...|++ +++.+|++.+++++..||+|++
T Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 259 YQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGF--ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence 778888876532 3468889999999999543 4455677 9999999999999889999874
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=6.4e-31 Score=225.73 Aligned_cols=271 Identities=25% Similarity=0.393 Sum_probs=221.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|+|++|+|+++|+++++|++||+|++.+- ..|++|++|..+..++|++....+. ...|+|++|+.+++++++++|+
T Consensus 56 ~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~ 134 (330)
T cd08245 56 VPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPD 134 (330)
T ss_pred ccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCC
Confidence 6899999999999999999999999987443 4699999999999999999766553 3579999999999999999999
Q ss_pred CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
++++.+++.+ ..+.+||++++...++++++|||+|+|.+|++++++++.+|. .++++.+++++.++++++|++.+++.
T Consensus 135 ~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 213 (330)
T cd08245 135 GLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDS 213 (330)
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEecc
Confidence 9999999866 577889998877788999999999888899999999999999 58888899999999999998877763
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~- 237 (290)
. ..+.... ..+++|++||+++.......++++++++|+++.++..... .......++.++.++.+....
T Consensus 214 ~--~~~~~~~-------~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (330)
T cd08245 214 G--AELDEQA-------AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG 284 (330)
T ss_pred C--CcchHHh-------ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC
Confidence 2 2222111 1247999999988767888999999999999999854322 122233466677788777655
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
...+++++++++++.+.+ ..+.+++ ++++++++.+.+++..+|+|+
T Consensus 285 ~~~~~~~~~ll~~~~l~~---~~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 RADLQEALDFAAEGKVKP---MIETFPL--DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHHcCCCcc---eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence 567888999999998843 3356777 999999999999888888875
No 82
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=4.2e-31 Score=227.49 Aligned_cols=248 Identities=19% Similarity=0.197 Sum_probs=197.3
Q ss_pred ccccce--eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecC-CceEEC
Q 022879 2 VIGHEC--AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKL 78 (290)
Q Consensus 2 i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~ 78 (290)
++|+++ .|.+..+|+++++|++||+|+. .|+|+||+++++ ..++++
T Consensus 70 ~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~-------------------------------~g~~aey~~v~~~~~~~~l 118 (338)
T cd08295 70 KPGEVITGYGVAKVVDSGNPDFKVGDLVWG-------------------------------FTGWEEYSLIPRGQDLRKI 118 (338)
T ss_pred CCCCeEeccEEEEEEecCCCCCCCCCEEEe-------------------------------cCCceeEEEecchhceeec
Confidence 577654 4566668888999999999984 268999999999 799999
Q ss_pred C-CCCChh-hhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cC
Q 022879 79 P-DNVSLE-EGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IG 152 (290)
Q Consensus 79 P-~~~~~~-~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg 152 (290)
| +++++. +++.+ .++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|
T Consensus 119 p~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lG 197 (338)
T cd08295 119 DHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLG 197 (338)
T ss_pred CCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Confidence 6 578876 56655 588899999854 78999999999987 9999999999999999 58888889999999988 99
Q ss_pred CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-----cccchhhhc
Q 022879 153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPAAV 226 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~ 226 (290)
++.++++.. ..++.+.+++. .++++|++||++|+ ..+..++++++++|+++.+|..... . ..+...+.+
T Consensus 198 a~~vi~~~~-~~~~~~~i~~~---~~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 272 (338)
T cd08295 198 FDDAFNYKE-EPDLDAALKRY---FPNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIY 272 (338)
T ss_pred CceeEEcCC-cccHHHHHHHh---CCCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhh
Confidence 998887532 23666666554 24689999999997 6889999999999999999854321 1 123345667
Q ss_pred cCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 227 REVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 227 ~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+++++.+.... .+.++++++++++|.+++. +...|++ +++.+|++.+.+++..||+|+++
T Consensus 273 ~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 273 KRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGL--ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred ccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence 88888875432 2347889999999998543 4445677 99999999999988899999975
No 83
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.5e-31 Score=224.78 Aligned_cols=243 Identities=38% Similarity=0.665 Sum_probs=204.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
++|+|++|+|+++|++++.|++||+|++.+. .+|+.|++|..+..+.|++.+.++ ....|+|++|+.+++..++++|+
T Consensus 58 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~ 136 (306)
T cd08258 58 VLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPE 136 (306)
T ss_pred eeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcC
Confidence 5799999999999999999999999999775 689999999999999998765544 34579999999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEE
Q 022879 81 NVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~ 157 (290)
++++.+++.+..+.++|+++.. ++++++++|||.|+|.+|++++++|+.+|++ ++++ ++++++.++++++|++.+
T Consensus 137 ~~~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~- 214 (306)
T cd08258 137 NLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV- 214 (306)
T ss_pred CCCHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-
Confidence 9999988866688889998754 7889999999988899999999999999995 5554 445668888899998776
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeee
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFR 236 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~ 236 (290)
++ ...++...+.++. .+.++|++||++|+...+...++.|+++|+++.+|... ....++...++++++++.|++.
T Consensus 215 ~~--~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 290 (306)
T cd08258 215 NG--GEEDLAELVNEIT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRS 290 (306)
T ss_pred CC--CcCCHHHHHHHHc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEec
Confidence 53 3456766666553 45689999999987678889999999999999999754 2345566677889999999998
Q ss_pred c-CCcHHHHHHHHHcC
Q 022879 237 Y-KNTWPLCLELLRSG 251 (290)
Q Consensus 237 ~-~~~l~~~~~~~~~g 251 (290)
+ +++++++++++++|
T Consensus 291 ~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 291 STPASWETALRLLASG 306 (306)
T ss_pred CchHhHHHHHHHHhcC
Confidence 7 77899999999875
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4.7e-31 Score=226.46 Aligned_cols=244 Identities=20% Similarity=0.281 Sum_probs=195.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC---ceEEC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKL 78 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~---~~~~~ 78 (290)
++|+|++|+|++ .+++|++||+|+.. ++|++|+.++++ .++++
T Consensus 62 v~G~e~~G~V~~---~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 62 MIGTQVAKVIES---KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred EecceEEEEEec---CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEEC
Confidence 679999999985 45679999999852 578999999999 99999
Q ss_pred CCCCCh------hhhhhhhhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879 79 PDNVSL------EEGAMCEPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE 150 (290)
Q Consensus 79 P~~~~~------~~aa~~~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 150 (290)
|+++++ ..++...++.|||+++. ..++++|+++||+|+ |++|++++|+|+.+|+ .++++++++++.+++++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 999882 22323358889999985 488999999999986 9999999999999999 58888899999999999
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Cc----cccchh
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EM----TVPLTP 223 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~~~~ 223 (290)
+|++.+++++ .+++.+.++++ .+.++|++||++|+ ..+..++++++++|+++.+|.... .. ......
T Consensus 187 ~Ga~~vi~~~--~~~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 260 (329)
T cd08294 187 LGFDAVFNYK--TVSLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQET 260 (329)
T ss_pred cCCCEEEeCC--CccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHH
Confidence 9999988753 45777776654 24689999999997 688999999999999999985321 10 112234
Q ss_pred hhccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 224 AAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 224 ~~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
++++.+++.+.... .+.++++++++++|.+++. ....+++ +++++|++.+.+++..||+|+++
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 261 IIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence 66788888876532 2347788999999998544 3345677 99999999999998899999875
No 85
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.5e-31 Score=209.52 Aligned_cols=251 Identities=20% Similarity=0.308 Sum_probs=196.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
|-|+|++|+|+.+|+++++|++||+|.... ...|+|++|.+.+++.++++++.
T Consensus 80 VgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~ 132 (354)
T KOG0025|consen 80 VGGNEGVGEVVAVGSNVKGFKPGDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKD 132 (354)
T ss_pred ccCCcceEEEEEecCCcCccCCCCeEeecC---------------------------CCCccceeeEeecccceEEcCCc
Confidence 569999999999999999999999999743 24599999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHHHHcCCCE
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVAKEIGADN 155 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~~~lg~~~ 155 (290)
++.+.||++. ..+|||.++.. .++.+|++|.-.|+ +++|++.+|+|+++|++.+-++...+. -.+.++.||+++
T Consensus 133 ~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ 212 (354)
T KOG0025|consen 133 IPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATE 212 (354)
T ss_pred CChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCce
Confidence 9999999884 88999999977 78999999888888 999999999999999976555533332 233456799999
Q ss_pred EEecCCCcccHH-HHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec-cCCCCccccchhhhccCcEEEE
Q 022879 156 IVKVSTNLQDIA-EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVG 233 (290)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~i~~ 233 (290)
++.- +.+. ...++. ......+.+.|||+|+ .....+.+.|..+|+++.+| ++..+..++...++++.+.+.|
T Consensus 213 ViTe----eel~~~~~~k~-~~~~~~prLalNcVGG-ksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rG 286 (354)
T KOG0025|consen 213 VITE----EELRDRKMKKF-KGDNPRPRLALNCVGG-KSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRG 286 (354)
T ss_pred EecH----HHhcchhhhhh-hccCCCceEEEeccCc-hhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeee
Confidence 9751 1111 111111 1134578999999998 46678889999999999998 5667888999999999999999
Q ss_pred eeec------------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEe
Q 022879 234 VFRY------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 289 (290)
Q Consensus 234 ~~~~------------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~ 289 (290)
.|.. .+.+.++.+++++|+++.. -.+..++ ++.+.|++...+. ...+|-++.
T Consensus 287 fWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 287 FWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPL--ADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred eeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence 9864 2456789999999999433 3344577 8888888764433 333555543
No 86
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.6e-30 Score=218.63 Aligned_cols=250 Identities=29% Similarity=0.448 Sum_probs=204.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++.+++||+|+.. ..|+|++|+.+++++++++|++
T Consensus 54 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~ 104 (312)
T cd08269 54 GPGHEGWGRVVALGPGVRGLAVGDRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSL 104 (312)
T ss_pred ccceeeEEEEEEECCCCcCCCCCCEEEEe-----------------------------cCCcceeeEEEchhheEECCCc
Confidence 57999999999999999999999999963 2488999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879 82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 160 (290)
+ ..++.. .++++++++++.++++++++++|+|+|.+|++++++|+.+|++.++++++++++.++++.+|++.+++
T Consensus 105 ~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~-- 180 (312)
T cd08269 105 L--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVT-- 180 (312)
T ss_pred h--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEec--
Confidence 8 233333 57788998888788899999999988999999999999999964888888888999999999987775
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec--
Q 022879 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-- 237 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-- 237 (290)
....++...+.++. .+.++|+++||+|....+...+++++++|+++.+|... ....++.....++.+++.+....
T Consensus 181 ~~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (312)
T cd08269 181 DDSEAIVERVRELT--GGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDP 258 (312)
T ss_pred CCCcCHHHHHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCc
Confidence 33456767776653 45689999999987678889999999999999998543 22334444567788887776533
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEE
Q 022879 238 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMF 288 (290)
Q Consensus 238 ---~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl 288 (290)
.+.+++++++++++.+.+...+.+.+++ ++++++++.+.+++. .+|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 259 RIGLEGMREAVKLIADGRLDLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred cchhhHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence 3679999999999998543345667788 999999999988844 689886
No 87
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=7.4e-30 Score=218.50 Aligned_cols=253 Identities=26% Similarity=0.333 Sum_probs=205.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++.+++||+|++... ...|+|++|+.++.++++++|++
T Consensus 62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08244 62 VPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDG 115 (324)
T ss_pred CCccceEEEEEEeCCCCCCCCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCC
Confidence 5799999999999999999999999997421 13689999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.|||..++.++++++++++|+|+ |.+|++++++|+.+|+ .++++++++++.+.++.+|++.++++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (324)
T cd08244 116 LDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDY 194 (324)
T ss_pred CCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEec
Confidence 999999866 47778865566688999999999986 9999999999999999 58888888999999999998887764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~- 237 (290)
...++.+.+.+. ..+.++|+++|++|+. .....+++++++|+++.+|..... ..++...++.+++.+.+....
T Consensus 195 --~~~~~~~~~~~~--~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (324)
T cd08244 195 --TRPDWPDQVREA--LGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQ 269 (324)
T ss_pred --CCccHHHHHHHH--cCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeeccc
Confidence 334565665544 2456899999999974 668899999999999999864322 233434456777777766443
Q ss_pred ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++++++++.++.+. +.+...+++ +++.+|++.+.+++..+|+++++
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 270 AERGGLRALEARALAEAAAGRLV--PVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred CCHHHHHHHHHHHHHHHHCCCcc--CccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 34677889999999883 446677888 99999999999988899999874
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.98 E-value=1.7e-29 Score=217.44 Aligned_cols=251 Identities=19% Similarity=0.302 Sum_probs=195.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|+.... ....|+|++|+.++++.++++|++
T Consensus 61 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 61 ILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD-------------------------IDRPGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred ccceeeEEEEEEeCCCCCCCCCCCEEEEcCC-------------------------CCCCCcccceEEEcHHHcccCCCC
Confidence 6899999999999999999999999986310 123599999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh-cCCCC-----CCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcC
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR-ANIGP-----ETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIG 152 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~-----~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg 152 (290)
+++++++.++ .+.|||+++.. .++++ +++|||+|+ |++|++++|+|+.+ |+ .++++.+++++.++++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999998774 77889999844 66766 999999987 99999999999998 99 5888888889999999999
Q ss_pred CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879 153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 232 (290)
++++++++ .++...++++ .++++|+++|++++.......+++++++|+++.++.. ..++...+..+++.+.
T Consensus 195 ~~~~~~~~---~~~~~~i~~~---~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 195 AHHVIDHS---KPLKAQLEKL---GLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLH 265 (336)
T ss_pred CCEEEECC---CCHHHHHHHh---cCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEE
Confidence 99888743 2566666552 4568999999987667889999999999999988532 1233333333444444
Q ss_pred Eeeec-------------CCcHHHHHHHHHcCCCCCCCceeeEee-CChhhHHHHHHHHhcCCCceeEEEe
Q 022879 233 GVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 233 ~~~~~-------------~~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+.... ...+++++++++++.++ +.+.+.++ ++++++++|++.+.+++..+|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEeecccccchhhhhhhHHHHHHHHHHHHCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 32111 14578899999999884 33334444 2348999999999998888998874
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=4.4e-29 Score=214.72 Aligned_cols=273 Identities=26% Similarity=0.363 Sum_probs=217.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|+++++|++||+|++.....|+.+. .+.|..+...+ ...+|+|++|+.++.++++++|++
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~------~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 60 IPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGP------PTAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred ccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccc------ccccccccccc-cccCceeeeEEEecHHHeEECCCC
Confidence 68999999999999999999999999987655444333 23443332232 235799999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.+||+++.. ..++++++++|+|+|++|+++++++++.|+ .+++++.++++.+.++++|.+.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 999888877 478889998865 788999999999889999999999999999 58888889999999988998888764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~- 237 (290)
.. ..++...++++. .++++|++||+++. .....++++++++|+++.+|..... .......++.+++++.+....
T Consensus 212 ~~-~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RT-TPDWGEEVLKLT--GGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Cc-ccCHHHHHHHHc--CCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc
Confidence 32 155666666552 45689999999985 6788999999999999999865432 233444567788888887654
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...+++++++++++.+. +.....+++ ++++++++.+.+++..+|+++++
T Consensus 288 ~~~~~~~~~l~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 RAQFEAMNRAIEAHRIR--PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHHHHHcCCcc--cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 56788999999988773 334567788 99999999999888888999864
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=2.8e-29 Score=215.79 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=202.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++.+++||+|+.. ..+|+|++|++++.++++++|++
T Consensus 61 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 61 ILGLEVAGYVEDVGSDVKRFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred ccceeeEEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCC
Confidence 68999999999999999999999999863 12589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.+|++++.. ..++++++++|+|+ |++|++++++|+++|++ ++.+.+++++.++++++|.+.+++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEe
Confidence 999888866 578889999865 78899999999986 99999999999999995 556778889999999999988776
Q ss_pred cCCCccc-HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-cc-ccchhhhccCcEEEEee
Q 022879 159 VSTNLQD-IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVF 235 (290)
Q Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~ 235 (290)
.. ..+ +.+.++++. .+.++|++||++|+ ..+..++++++++|+++.++..... .. ++...+..+..++.+..
T Consensus 192 ~~--~~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 192 YP--DEEGFAPKVKKLT--GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred cC--ChhHHHHHHHHHh--CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeee
Confidence 43 223 555665542 45689999999986 6889999999999999999854322 12 45455566666777754
Q ss_pred ecC-----------CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 236 RYK-----------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 236 ~~~-----------~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
... +.+++++++++++.+. +.+.+.+++ ++++++++.+.+++..+|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence 321 2357788899999884 446677888 99999999999887788999864
No 91
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=2.3e-29 Score=217.10 Aligned_cols=253 Identities=24% Similarity=0.323 Sum_probs=200.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++..|++||+|++... ..|+|++|+.++.++++++|++
T Consensus 66 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~ 118 (341)
T cd08290 66 VGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPND 118 (341)
T ss_pred CCCcceEEEEEEeCCCCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCC
Confidence 6899999999999999999999999996321 2589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHcCCC
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKEIGAD 154 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~ 154 (290)
+++.+++.+ ..+.|+|+++.. ..++++++|||+|+ |++|++++++|+..|++ ++++..++ ++.++++++|++
T Consensus 119 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~ 197 (341)
T cd08290 119 VDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGAD 197 (341)
T ss_pred CCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCC
Confidence 999999877 478899999865 67899999999987 99999999999999995 55555554 677888899999
Q ss_pred EEEecCCC-cccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEE
Q 022879 155 NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVV 232 (290)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~ 232 (290)
.+++++.. ..++...++++. .+ ++|++||++|+ ......+++++++|+++.+|... ....++...++.+++++.
T Consensus 198 ~~~~~~~~~~~~~~~~i~~~~--~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 273 (341)
T cd08290 198 HVLTEEELRSLLATELLKSAP--GG-RPKLALNCVGG-KSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLR 273 (341)
T ss_pred EEEeCcccccccHHHHHHHHc--CC-CceEEEECcCc-HhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEE
Confidence 88874321 014555555442 23 79999999997 46778899999999999998533 222344445577888888
Q ss_pred Eeeec-----------CCcHHHHHHHHHcCCCCCCCceeeEe---eCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 233 GVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 233 ~~~~~-----------~~~l~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.... ...++.+++++.++.+.+. ....+ ++ ++++++++.+.+++..+|+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 274 GFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred EEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence 86543 1257889999999988543 33455 67 99999999999888889999875
No 92
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=2.1e-29 Score=210.12 Aligned_cols=235 Identities=36% Similarity=0.627 Sum_probs=194.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|+..+..+|++|++|.. .|+.....+ ....|+|++|+.++.+.++++|++
T Consensus 32 ~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~ 106 (271)
T cd05188 32 ILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGILG-EGLDGGFAEYVVVPADNLVPLPDG 106 (271)
T ss_pred ccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCEec-cccCCcceEEEEechHHeEECCCC
Confidence 579999999999999999999999999999999999999997 677665544 356799999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ .++.+|++++.. ..++++++|||+|+|++|++++++++..|. .++++++++++.+.++.++.+.+++.
T Consensus 107 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 185 (271)
T cd05188 107 LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDY 185 (271)
T ss_pred CCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccC
Confidence 999999987 689999999876 455899999999985599999999999998 68888899999999999998877663
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcccc-chhhhccCcEEEEeeec-
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~- 237 (290)
...++.+.+. ...+.++|++||+++........++.++++|+++.++......... ....+.+++++.+...+
T Consensus 186 --~~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 186 --KEEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred --CcCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC
Confidence 3344544444 2356789999999997567888999999999999998654332222 34467788999888766
Q ss_pred CCcHHHHHHH
Q 022879 238 KNTWPLCLEL 247 (290)
Q Consensus 238 ~~~l~~~~~~ 247 (290)
..++++++++
T Consensus 261 ~~~~~~~~~~ 270 (271)
T cd05188 261 REDFEEALDL 270 (271)
T ss_pred HHHHHHHHhh
Confidence 4567777665
No 93
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=4.6e-29 Score=213.55 Aligned_cols=250 Identities=25% Similarity=0.372 Sum_probs=203.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.+++||+|++.+ .+|+|++|+.++...++++|++
T Consensus 59 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~ 110 (323)
T cd05282 59 VPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----------------------------GEGTWQEYVVAPADDLIPVPDS 110 (323)
T ss_pred cCCcceEEEEEEeCCCCCCCCCCCEEEEeC----------------------------CCCcceeEEecCHHHeEECCCC
Confidence 679999999999999999999999999642 1589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++|+++.. ..+.+++++||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|++.+++
T Consensus 111 ~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 189 (323)
T cd05282 111 ISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVID 189 (323)
T ss_pred CCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEec
Confidence 999888866 477788888755 67889999999987 9999999999999999 4777778888889889999988877
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 237 (290)
+. ..++...+.+. +.+.++|++||++|+ ......+++++++|+++.+|..... ..++...+..+++++.+....
T Consensus 190 ~~--~~~~~~~~~~~--~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd05282 190 SS--PEDLAQRVKEA--TGGAGARLALDAVGG-ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLR 264 (323)
T ss_pred cc--chhHHHHHHHH--hcCCCceEEEECCCC-HHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEeh
Confidence 43 34555555544 356789999999998 4567889999999999999865432 234444444478887776543
Q ss_pred -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+.++++++++.++.+. +...+.+++ +++.+|++.+.+++..+|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 265 QWLHSATKEAKQETFAEVIKLVEAGVLT--TPVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HhhccCCHHHHHHHHHHHHHHHhCCCcc--cCccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence 24588899999999884 345677888 9999999999988888899874
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=4.6e-30 Score=217.81 Aligned_cols=222 Identities=27% Similarity=0.458 Sum_probs=173.3
Q ss_pred CCCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHHh-c------CCCCCCeEEEECC-CHHHHHHHHHHH
Q 022879 58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-A------NIGPETNVLIMGA-GPIGLVTMLAAR 128 (290)
Q Consensus 58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~------~~~~~~~vlI~Ga-g~vG~~ai~la~ 128 (290)
....|+|+||+++++..++++|+++++.+||.++ .+.|||.++.. . +.++|++|||+|+ |++|++++|+|+
T Consensus 100 ~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk 179 (347)
T KOG1198|consen 100 FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAK 179 (347)
T ss_pred ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHH
Confidence 3467999999999999999999999999999885 88899999866 6 7999999999976 999999999999
Q ss_pred HCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEE
Q 022879 129 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC 208 (290)
Q Consensus 129 ~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 208 (290)
+.|+ ..+++.+++++.++++++|++.+++|+. +++.+.+++. .+++||+||||+|++ .......++...|+..
T Consensus 180 ~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~ 252 (347)
T KOG1198|consen 180 HAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGA 252 (347)
T ss_pred hcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCCCccEEEECCCCC-ccccchhhhccCCceE
Confidence 9996 4566669999999999999999999764 6776666554 267999999999984 6677778888777655
Q ss_pred EeccCC---CCcccc-chh-h--------hccCcEEEEee--ecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHH
Q 022879 209 LVGMGH---HEMTVP-LTP-A--------AVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 273 (290)
Q Consensus 209 ~~g~~~---~~~~~~-~~~-~--------~~~~~~i~~~~--~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a 273 (290)
.++... .....+ ..+ + ..+........ ...+.++.+.+++++|++ ++.+.+.|++ +++.+|
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~--~~~~ea 328 (347)
T KOG1198|consen 253 YIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPF--SQAKEA 328 (347)
T ss_pred EEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeH--HHHHHH
Confidence 444322 111111 110 0 01111111111 116789999999999977 8889999999 999999
Q ss_pred HHHHhcCCCceeEEEeC
Q 022879 274 FETSARGGTAIKVMFNL 290 (290)
Q Consensus 274 ~~~~~~~~~~gk~vl~~ 290 (290)
++++.++...||+++.+
T Consensus 329 ~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 329 FEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHhhcCCcceEEEEe
Confidence 99999998999999864
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=6.7e-29 Score=210.87 Aligned_cols=242 Identities=26% Similarity=0.316 Sum_probs=197.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|+.. ..+|+|++|+.+++++++++|++
T Consensus 54 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~ 105 (305)
T cd08270 54 VPGWDAAGVVERAAADGSGPAVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDG 105 (305)
T ss_pred cccceeEEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCC
Confidence 57999999999999999999999999863 12589999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.++ .+.+||+++......++++++|+|+ |++|++++++++.+|+ .++.+++++++.+.++++|++..+..
T Consensus 106 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 106 VSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999998774 7789999987644446999999988 9999999999999999 58888888999999999998765431
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccccchhhhc--cCcEEEEeee
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAV--REVDVVGVFR 236 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--~~~~i~~~~~ 236 (290)
. . ++ .++++|+++|++|+ ..+...+++++++|+++.+|.... ...++...+.. ++.++.+...
T Consensus 185 ~---~-------~~---~~~~~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (305)
T cd08270 185 G---S-------EL---SGAPVDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFL 250 (305)
T ss_pred c---c-------cc---cCCCceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEc
Confidence 1 1 11 12479999999997 578899999999999999986432 22344444443 5777777654
Q ss_pred c-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 237 Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 237 ~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
. .+.++.++++++++++. +.+.+.+++ +++++|++.+.+++..+|+|++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 251 YDGEPLAADLARLLGLVAAGRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cCHHHHHHHHHHHHHHHHCCCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 3 45688899999999995 335667788 99999999999888889999875
No 96
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=7.2e-29 Score=207.87 Aligned_cols=241 Identities=29% Similarity=0.408 Sum_probs=191.5
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 80 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~ 80 (290)
.++|+|++|+|+++|+++++|++||+|+.. ++|++|+.+++++++++|+
T Consensus 22 ~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~~ip~ 70 (277)
T cd08255 22 LPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLLVPLPD 70 (277)
T ss_pred cccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHeeECcC
Confidence 378999999999999999999999999863 4689999999999999999
Q ss_pred CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEec
Q 022879 81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKV 159 (290)
Q Consensus 81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~ 159 (290)
++++.+++.+..+.+||+++...++++++++||+|+|.+|++++++|+.+|+++++++++++++.++++++| .+.++..
T Consensus 71 ~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~ 150 (277)
T cd08255 71 GLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD 150 (277)
T ss_pred CCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcccccc
Confidence 999988887777888999987788999999999988999999999999999955888989999999999998 4544332
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-- 237 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-- 237 (290)
. . .. ..++++|++||+++........+++++++|+++.+|............+..+.+++.+....
T Consensus 151 ~---~-------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
T cd08255 151 T---A-------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGI 218 (277)
T ss_pred c---h-------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeeccccc
Confidence 1 0 01 13568999999998777888999999999999999864432111112233444455544321
Q ss_pred -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEE
Q 022879 238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF 288 (290)
Q Consensus 238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl 288 (290)
.+.+++++++++++.+ .+.+.+.+++ +++.+|++.+.++ ....|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 219 GRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 2578999999999987 4445667778 9999999998876 45667764
No 97
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=1.4e-28 Score=211.04 Aligned_cols=253 Identities=26% Similarity=0.328 Sum_probs=198.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.+++||+|+... ...|+|++|+.++.++++++|++
T Consensus 60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 60 GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred ccCcceEEEEEEeCCCCCCCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCC
Confidence 579999999999999999999999998521 13589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++++++.. ..++++++++|+|+ |.+|++++++++.+|+ .+++++.++++.++++++|.+.+++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 999988865 467788888755 78899999999976 9999999999999999 5788888999999999999888776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccC------cEE
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVRE------VDV 231 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~i 231 (290)
. ...++.+.++++. .++++|++|||+|+ ......+++++++|+++.+|..... ..++...+..+. ..+
T Consensus 192 ~--~~~~~~~~~~~~~--~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 Y--REENIVERVKEIT--GGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred C--CCCcHHHHHHHHc--CCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEeccee
Confidence 3 3456666666653 56789999999996 6788899999999999999865422 122222222111 111
Q ss_pred EEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 232 VGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 232 ~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+.... .+.++.+++++.+|.+.+.....+.|++ +++.++++.+.+++..+|+|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 121111 2345668899999998644444567888 9999999999999889999985
No 98
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=1e-28 Score=197.44 Aligned_cols=233 Identities=18% Similarity=0.197 Sum_probs=193.0
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCCChhhhh--hh-hh
Q 022879 16 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC-EP 92 (290)
Q Consensus 16 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa--~~-~~ 92 (290)
++.+.|++||.|... .+|+||..++.+.+.++++..-+..+. .+ ++
T Consensus 86 S~~~~f~~GD~V~~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmp 134 (340)
T COG2130 86 SNHPGFQPGDIVVGV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP 134 (340)
T ss_pred cCCCCCCCCCEEEec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCc
Confidence 667889999999853 589999999999999998665444443 33 68
Q ss_pred hHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHH
Q 022879 93 LSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEE 169 (290)
Q Consensus 93 ~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~ 169 (290)
..|||.+|.. +++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.+..+||. .+++.+.
T Consensus 135 G~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~~~~ 211 (340)
T COG2130 135 GLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDFAQA 211 (340)
T ss_pred hHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccHHHH
Confidence 8899999855 89999999999987 9999999999999999 69999999999999987 9999999965 4688888
Q ss_pred HHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccccc-----chhhhccCcEEEEeeec-----
Q 022879 170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP-----LTPAAVREVDVVGVFRY----- 237 (290)
Q Consensus 170 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~-----~~~~~~~~~~i~~~~~~----- 237 (290)
+++. -.+++|+.||++|+ +.++..+..|+.++|++.+|.-+. ....+ +..++.+++++.|+.-.
T Consensus 212 L~~a---~P~GIDvyfeNVGg-~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~ 287 (340)
T COG2130 212 LKEA---CPKGIDVYFENVGG-EVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ 287 (340)
T ss_pred HHHH---CCCCeEEEEEcCCc-hHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence 7765 56899999999998 799999999999999999996331 11111 22356678899998652
Q ss_pred --CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 --~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++++.+|+.+|+++.+..+ +-++ +++++|+..+.+++.+||+|+++
T Consensus 288 ~~~e~~~~l~~wv~~GKi~~~eti--~dGl--EnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 288 RFPEALRELGGWVKEGKIQYRETI--VDGL--ENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred hhHHHHHHHHHHHHcCceeeEeee--hhhh--hccHHHHHHHhcCCccceEEEEe
Confidence 4678899999999999665533 4467 99999999999999999999975
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=4.2e-28 Score=207.16 Aligned_cols=250 Identities=25% Similarity=0.352 Sum_probs=196.3
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|. ..+++||+|++....- +...+|+|++|+.+++.+++++|++
T Consensus 59 ~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~ 114 (320)
T cd08243 59 VLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSD 114 (320)
T ss_pred cccceeEEEEEEecC--CCCCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCC
Confidence 579999999999995 5799999998753210 0124599999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ .++.+||+++.. ..++++++|||+|+ |++|++++++|+.+|+ .++++..++++.+.++++|++.++.
T Consensus 115 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 193 (320)
T cd08243 115 LSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVI 193 (320)
T ss_pred CCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEe
Confidence 999988866 588899999865 67899999999987 9999999999999999 5888888899999999999987764
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc---cchhh--hccCcEEEE
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPA--AVREVDVVG 233 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~--~~~~~~i~~ 233 (290)
. ..++.+.+.++ ++++|+++|++|+ ..+...+++++++|+++.+|........ ..... ..+++.+.+
T Consensus 194 --~-~~~~~~~i~~~----~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (320)
T cd08243 194 --D-DGAIAEQLRAA----PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG 265 (320)
T ss_pred --c-CccHHHHHHHh----CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence 2 33555555544 5689999999997 6888999999999999999864322111 11111 245566655
Q ss_pred eeec---CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 234 VFRY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 234 ~~~~---~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.... ...++.++++++++.++ +...+.+++ +++++|++.+.+++..+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 266 SSSGDVPQTPLQELFDFVAAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cchhhhhHHHHHHHHHHHHCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence 5432 34578899999999884 335567788 999999999998888889886
No 100
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=4.4e-28 Score=208.79 Aligned_cols=259 Identities=25% Similarity=0.333 Sum_probs=196.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.+++||+|+.....+++ ....+|+|++|+.++.++++++|++
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~ 116 (339)
T cd08249 57 ILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDN 116 (339)
T ss_pred eeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCC
Confidence 57999999999999999999999999976432211 1234799999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh-cCC----------CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR-ANI----------GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 148 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~-~~~----------~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 148 (290)
+++.+++.++ .+.++|+++.. .++ .+++++||+|+ |.+|++++++++.+|++ ++++. ++++.+.+
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~ 194 (339)
T cd08249 117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLV 194 (339)
T ss_pred CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHH
Confidence 9999998775 88899998854 433 78999999997 99999999999999995 66665 45888888
Q ss_pred HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhcc--CCEEEEeccCCCCccccchhhhc
Q 022879 149 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--GGKVCLVGMGHHEMTVPLTPAAV 226 (290)
Q Consensus 149 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~ 226 (290)
+.+|+++++++ ...++.+.++++ .++++|++||++|.+..+..+++++++ +|+++.+|.......+. .....
T Consensus 195 ~~~g~~~v~~~--~~~~~~~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~ 268 (339)
T cd08249 195 KSLGADAVFDY--HDPDVVEDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKV 268 (339)
T ss_pred HhcCCCEEEEC--CCchHHHHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceE
Confidence 99999888874 345666666554 346799999999975688999999999 99999998654321111 11111
Q ss_pred cCcEEEEeee---c-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879 227 REVDVVGVFR---Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 290 (290)
Q Consensus 227 ~~~~i~~~~~---~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~ 290 (290)
..+....... . ...++.+.++++++.+.+. ....+++.++++++|++.+.+++ ..+|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1111111111 1 3457789999999988554 33345511399999999999988 889999875
No 101
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=8.6e-28 Score=206.25 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=194.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++++++||+|++. ..|+|++|+.++.+.++++|++
T Consensus 63 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~ 113 (329)
T cd08250 63 DCGFEGVGEVVAVGEGVTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPEL 113 (329)
T ss_pred ccCceeEEEEEEECCCCCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCC
Confidence 67999999999999999999999999863 2589999999999999999997
Q ss_pred CChhhhhhhhhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
. ...++....+.+||+++.. ..++++++++|+|+ |.+|++++++++..|+ .++++.+++++.+.++.+|++.+++.
T Consensus 114 ~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 191 (329)
T cd08250 114 K-PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINY 191 (329)
T ss_pred c-chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeC
Confidence 3 2333344688899999865 78899999999986 9999999999999999 47888888888899999998887764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-----------ccccchhhhccC
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-----------MTVPLTPAAVRE 228 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~ 228 (290)
+ ..++...+.+. .++++|++||++|+ ..+...+++++++|+++.+|..... ..++ ...+.++
T Consensus 192 ~--~~~~~~~~~~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 264 (329)
T cd08250 192 K--TEDLGEVLKKE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKS 264 (329)
T ss_pred C--CccHHHHHHHh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcC
Confidence 3 34555555443 34679999999996 7888999999999999999854321 0111 2235567
Q ss_pred cEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 229 VDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 229 ~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.++.+.... .+.+++++++++++.+.+.....+.+++ +++++|++.+.+++..+|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence 777776432 3457888999999988543323344677 9999999999988888898874
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=2.1e-27 Score=203.56 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=190.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|++.| +++|++||+|+..+.. .+ ...+|+|+||+.++++.++++|++
T Consensus 60 ~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 60 IPGIDLAGTVVESN--DPRFKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CcccceeEEEEEcC--CCCCCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCC
Confidence 67999999999954 5779999999975320 11 134699999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh---cCC-CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR---ANI-GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~---~~~-~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 155 (290)
+++.+++.++ .+.||+.+++. ... ..+++|||+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 9999998774 66678877743 233 34789999988 9999999999999999 5888889999999999999988
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~ 234 (290)
+++.+. . ..+.++++ .+.++|++||++|+ ..+...+++++++|+++.+|.... ....+...++.+++++.+.
T Consensus 195 v~~~~~--~-~~~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T cd08289 195 VIPREE--L-QEESIKPL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGI 267 (326)
T ss_pred EEcchh--H-HHHHHHhh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEE
Confidence 876432 1 23334433 34679999999997 688899999999999999996532 2223344566788888886
Q ss_pred eec---CCcHHHHHHHHHcCCCC---CCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 235 FRY---KNTWPLCLELLRSGKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 235 ~~~---~~~l~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
... ......+++.+.+ .+. ....+.+.+++ +++.+|++.+.+++..+|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 268 DSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EeEecCchHHHHHHHHHHh-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence 432 1223333333332 221 12345778888 99999999999998899999874
No 103
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=3.7e-27 Score=199.64 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=197.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++++++||+|++... ..+|+|++|+.++++.++++|++
T Consensus 40 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~~~~~~~~~~p~~ 93 (303)
T cd08251 40 TPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------------------------ESMGGHATLVTVPEDQVVRKPAS 93 (303)
T ss_pred CcCceeeEEEEEECCCCCCCCCCCEEEEecC--------------------------CCCcceeeEEEccHHHeEECCCC
Confidence 6799999999999999999999999987421 13589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879 82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 159 (290)
+++.+++.+ ..+.++|++++...++++++++|+|+ +.+|++++++++++|+ .++++.+++++.+.++.+|.+.+++.
T Consensus 94 ~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 172 (303)
T cd08251 94 LSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINY 172 (303)
T ss_pred CCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999877 47889999987788999999999976 9999999999999999 58888888889999999999888764
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhh----ccCcEEEE
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAA----VREVDVVG 233 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~----~~~~~i~~ 233 (290)
. ..++...+.++. .++++|+++|++++ ......+++++++|+++.+|..... ..+....+. ++.+++.+
T Consensus 173 ~--~~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (303)
T cd08251 173 V--EEDFEEEIMRLT--GGRGVDVVINTLSG-EAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRK 247 (303)
T ss_pred C--CccHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHH
Confidence 3 346666666543 45689999999985 6788899999999999999854321 122222211 11222211
Q ss_pred eeec-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 234 VFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 234 ~~~~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.... .+.+.+++++++++.++ +...+.+++ +++.++++.+.+++..+|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 248 LLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPF--DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 1111 34577888999999884 445667888 999999999998888888874
No 104
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=3.5e-27 Score=202.03 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=190.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++ +++.|++||+|++.+. .. +...+|+|++|+.+++++++++|++
T Consensus 60 ~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~---------------------~~-g~~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 60 TPGIDAAGTVVSS--DDPRFREGDEVLVTGY---------------------DL-GMNTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred ccCcccEEEEEEe--CCCCCCCCCEEEEccc---------------------cc-CCCCCceeEEEEEEchhhEEECCCC
Confidence 5799999999999 4668999999997421 00 1124699999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh---cCCC-CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR---ANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~---~~~~-~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 155 (290)
+++.+++.++ .+.+++.+++. ..+. .+++|+|+|+ |.+|++++++|+.+|++ ++++++++++.++++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcE
Confidence 9999998774 67788888754 2335 3579999998 99999999999999995 888889999999999999988
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~ 234 (290)
+++.. +....+.+. ..++++|++||++|+ ..+...+++++++|+++.+|.... ...++...++.+++++.+.
T Consensus 195 ~~~~~----~~~~~~~~~--~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05280 195 VLDRE----DLLDESKKP--LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGI 267 (325)
T ss_pred EEcch----hHHHHHHHH--hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEE
Confidence 87632 111122222 234579999999997 688999999999999999986432 2233444455678887775
Q ss_pred eec---C----CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 235 FRY---K----NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 235 ~~~---~----~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
... . +.++.+.+++.++.. +.+...+++ ++++++++.+.+++..+|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 268 DSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 433 1 223445555555533 336677888 99999999999998899999875
No 105
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.96 E-value=5.7e-27 Score=201.73 Aligned_cols=252 Identities=21% Similarity=0.298 Sum_probs=197.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++.|++||+|+.... ...+|+|++|+.++.++++++|++
T Consensus 62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~ 116 (336)
T cd08252 62 ILGWDASGVVEAVGSEVTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKS 116 (336)
T ss_pred ccccceEEEEEEcCCCCCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCC
Confidence 6899999999999999999999999986311 124699999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh-cCCCC-----CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcC
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR-ANIGP-----ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIG 152 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~-----~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg 152 (290)
+++.+++.++ .+.++|+++.. +.+++ +++|+|+|+ |++|++++++++.+| + .+++++.++++.++++++|
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g 195 (336)
T cd08252 117 LSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELG 195 (336)
T ss_pred CCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcC
Confidence 9999888664 66788888744 66766 999999986 999999999999999 7 6888888889999999999
Q ss_pred CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879 153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 232 (290)
.+.+++.. .++...+.. ..++++|++||++|.+..+..++++++++|+++.+|... ..++...+..++.++.
T Consensus 196 ~~~~~~~~---~~~~~~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~ 267 (336)
T cd08252 196 ADHVINHH---QDLAEQLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFH 267 (336)
T ss_pred CcEEEeCC---ccHHHHHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEE
Confidence 98887643 245555542 234689999999997678899999999999999998543 2334444445666666
Q ss_pred Eeeec-------------CCcHHHHHHHHHcCCCCCCCc-eeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 233 GVFRY-------------KNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 233 ~~~~~-------------~~~l~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+.... .+.++++++++.+|.+.+... ....+++ +++.+|++.+.+++..+|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 268 WEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence 54321 134778999999998843211 1123456 9999999999998888898874
No 106
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=6.8e-27 Score=199.32 Aligned_cols=251 Identities=26% Similarity=0.336 Sum_probs=200.2
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|+++++|++||+|++.. ..|+|++|+.++++.++++|++
T Consensus 57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~ 108 (320)
T cd05286 57 VLGVEGAGVVEAVGPGVTGFKVGDRVAYAG----------------------------PPGAYAEYRVVPASRLVKLPDG 108 (320)
T ss_pred cCCcceeEEEEEECCCCCCCCCCCEEEEec----------------------------CCCceeEEEEecHHHceeCCCC
Confidence 689999999999999999999999998631 2589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
++..+++.+ ..+.++++++.. .++++++++||+|+ |++|++++++++.+|+ .+++++.++++.+.++++|.+.+++
T Consensus 109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 187 (320)
T cd05286 109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN 187 (320)
T ss_pred CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 999888866 577788888754 78899999999996 9999999999999999 5788888889999999999888776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 237 (290)
. ...++.+.+.++ ..+.++|++|||+++ ......+++++++|+++.+|..... ..++...+..+++.+.+....
T Consensus 188 ~--~~~~~~~~~~~~--~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (320)
T cd05286 188 Y--RDEDFVERVREI--TGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLF 262 (320)
T ss_pred C--CchhHHHHHHHH--cCCCCeeEEEECCCc-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehh
Confidence 3 334565566554 245689999999997 6788999999999999999864432 223333333566666543211
Q ss_pred ---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.+++++++++++.+.+ ...+.|++ +++.++++.+.+++..+|+++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 263 HYIATREELLARAAELFDAVASGKLKV--EIGKRYPL--ADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred hhcCCHHHHHHHHHHHHHHHHCCCCcC--cccceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 234567888999988743 35567778 99999999999888888998863
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=9.2e-27 Score=199.03 Aligned_cols=256 Identities=29% Similarity=0.439 Sum_probs=202.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+++|+++++|++||+|+..... .....|++++|+.++++.++++|++
T Consensus 60 ~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 60 VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG-----------------------WGRRQGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred ecccceEEEEEeeCCCCCCCCCCCEEEEeccc-----------------------cCCCCcceeeEEEecHHHcEeCCCC
Confidence 67999999999999999999999999975321 0113689999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ .++.+|++++.. .++.++++++|+|+ +++|++++++++..|. .+++++.++++.+.++.+|.+.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 999998876 588889998865 88899999999987 9999999999999999 5888888889999888899888776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
. ...++...+.++. .++++|+++|++|. ......+++++++|+++.++.......++...++.+...+.+...+
T Consensus 196 ~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (325)
T cd08253 196 Y--RAEDLADRILAAT--AGQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYT 270 (325)
T ss_pred C--CCcCHHHHHHHHc--CCCceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhh
Confidence 4 3345555555542 45689999999997 4678889999999999999864433334444445566666655432
Q ss_pred ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++.+.+++.++.+ .+.....+++ ++++++++.+.++...+|+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 271 ATPEERAAAAEAIAAGLADGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cCHHHHHHHHHHHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 2346667778888877 3445667788 99999999999888889999864
No 108
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=1.4e-26 Score=198.16 Aligned_cols=251 Identities=20% Similarity=0.295 Sum_probs=189.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+. +++..|++||+|++.+.. . +.+.+|+|++|+.+++++++++|++
T Consensus 59 ~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~ 114 (323)
T TIGR02823 59 IPGIDAAGTVVS--SEDPRFREGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEG 114 (323)
T ss_pred cceeeeEEEEEe--cCCCCCCCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCC
Confidence 579999999988 567789999999974210 0 0124699999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHHh---cCCCCCC-eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879 82 VSLEEGAMCE-PLSVGVHACRR---ANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~~---~~~~~~~-~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 155 (290)
+++.+++.++ .+.+++.+++. ..+.+++ +++|+|+ |.+|++++++|+++|++ ++++..++++.++++++|++.
T Consensus 115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~ 193 (323)
T TIGR02823 115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASE 193 (323)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcE
Confidence 9999988774 66777766643 4578898 9999998 99999999999999995 666667777778889999988
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~ 234 (290)
+++.. +.+ ..++.+ ...++|+++|++|+ ..+...+++++++|+++.+|.... ....+...++.+++++.+.
T Consensus 194 ~~~~~--~~~--~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T TIGR02823 194 VIDRE--DLS--PPGKPL---EKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGI 265 (323)
T ss_pred EEccc--cHH--HHHHHh---cCCCceEEEECccH-HHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEE
Confidence 77632 112 133333 22359999999996 578899999999999999996532 2223334455778888775
Q ss_pred eec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 235 FRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 235 ~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
... .+.++.+.+++..+.+. +. .+.+++ +++++|++.+.+++..+|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 266 DSVYCPMALREAAWQRLATDLKPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred eccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence 432 12355666677777763 33 456777 99999999999998899999864
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.96 E-value=1.1e-26 Score=201.23 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=191.5
Q ss_pred ccccceeEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC----ceE
Q 022879 2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCF 76 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~ 76 (290)
++|+|++|+|+++|++++ +|++||+|++..... ....|+|++|+++++. .++
T Consensus 61 ~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 61 GLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHP-----------------------YGGQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred ccCceeEEEEEEeCcccccCCCCCCEEEEeecCC-----------------------CCCCceeeEEEEEccccccceeE
Confidence 579999999999999998 899999999753221 1136899999999988 789
Q ss_pred ECCCCCChhhhhhh-hhhHHHHHHHHh-c-CCCCCCeEEEECC-CHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc
Q 022879 77 KLPDNVSLEEGAMC-EPLSVGVHACRR-A-NIGPETNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI 151 (290)
Q Consensus 77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~-~-~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l 151 (290)
++|+++++.+++.+ ..+.|+|+++.. . .+++|++++|+|+ +.+|++++++|+.+|. +.++++.+ +++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence 99999999999877 477789999876 4 6999999999988 8999999999999854 35666654 4555677889
Q ss_pred CCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhc---cCCEEEEec-cCCCCcc--------
Q 022879 152 GADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC---AGGKVCLVG-MGHHEMT-------- 218 (290)
Q Consensus 152 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~-------- 218 (290)
|++.+++.+.... .+...+.+.. ++++++|++|||+|+......++++++ ++|+++.++ .......
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWD 275 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhcc
Confidence 9988877433210 0333333322 125689999999998667888999999 999999875 2211100
Q ss_pred ---ccc----hhhhccCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 219 ---VPL----TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 219 ---~~~----~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
... ....+...++...... .+.++++++++.++.+ .+...+.+++ +++++|++.+.+++..+|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 276 NPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEe
Confidence 000 1122333343332211 2457889999999988 4446677888 9999999999988888999986
Q ss_pred C
Q 022879 290 L 290 (290)
Q Consensus 290 ~ 290 (290)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 4
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=5.6e-27 Score=201.19 Aligned_cols=243 Identities=21% Similarity=0.208 Sum_probs=192.2
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecC-CceEECCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPD 80 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P~ 80 (290)
++|+|++|+|+++|++ ++++||+|+.. ++|++|+.+++ +.++++|+
T Consensus 67 ~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~~~lP~ 113 (329)
T cd05288 67 PMRGGGVGEVVESRSP--DFKVGDLVSGF-------------------------------LGWQEYAVVDGASGLRKLDP 113 (329)
T ss_pred cccCceEEEEEecCCC--CCCCCCEEecc-------------------------------cceEEEEEecchhhcEECCc
Confidence 5689999999999964 79999999852 58999999999 99999999
Q ss_pred CCC--hhhhhh-h-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC
Q 022879 81 NVS--LEEGAM-C-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA 153 (290)
Q Consensus 81 ~~~--~~~aa~-~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~ 153 (290)
+++ +.+++. + ..+.++|+++.. ..+.++++|||+|+ |.+|++++++++..|+ .++++++++++.+.+++ +|+
T Consensus 114 ~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~ 192 (329)
T cd05288 114 SLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGF 192 (329)
T ss_pred ccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCC
Confidence 985 434433 4 588899998865 77889999999986 9999999999999999 58888888999998888 999
Q ss_pred CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc------ccchhhhcc
Q 022879 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT------VPLTPAAVR 227 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~ 227 (290)
+.+++++ ..++.+.+.++. +.++|++||++|+ ..+..++++++++|+++.+|....... ++....+.+
T Consensus 193 ~~~~~~~--~~~~~~~v~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T cd05288 193 DAAINYK--TPDLAEALKEAA---PDGIDVYFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITK 266 (329)
T ss_pred ceEEecC--ChhHHHHHHHhc---cCCceEEEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhC
Confidence 8887743 345666665543 3679999999996 688899999999999999985432211 223345677
Q ss_pred CcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 228 EVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 228 ~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
++++.+.... .+.+.+++++++++.+++.+. ..+++ +++.++++.+.+++..+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~l--~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 267 RLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRED--VVEGL--ENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccc--ccccH--HHHHHHHHHHhcCCCccceeC
Confidence 8888776543 245788899999998855433 34667 999999999988877788874
No 111
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=1.4e-26 Score=197.56 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=200.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|++++.+++||+|+.. ..+|+|++|+.+++++++++|++
T Consensus 60 ~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 60 ILGLEVAGVVVAVGPGVTGWKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred cccceeEEEEEeeCCCCCCCCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCC
Confidence 57999999999999999999999999863 23589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++++++.. ..+.++++++|+|+ |++|++++++++..|+ .+++++.++++.+.++.++.+.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 999888866 588889998765 77899999999987 9999999999999999 5888888888888888899877766
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
. ...++.+.+.+.. .++++|++||++|+ ..+...+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus 191 ~--~~~~~~~~~~~~~--~~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 Y--RTEDFAEEVKEAT--GGRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred C--CchhHHHHHHHHh--CCCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeecc
Confidence 3 3345555555442 34679999999997 457888999999999999985432 2233444455678888776533
Q ss_pred -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
...++++++++.++.+ .+..++.|++ ++++++++.+.+++..+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 1235678888888888 4446677888 999999999988877888874
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=3.7e-26 Score=195.35 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=200.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|+++.++++||+|+.. ..+|+|++|+.++..+++++|++
T Consensus 60 ~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 60 ILGLEVAGEVVAVGEGVSRWKVGDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CccceeEEEEEEeCCCCCCCCCCCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCC
Confidence 57999999999999999999999999863 23489999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++++++. ...++++++++|+|+ |++|++++++++.+|+ .++++..++++.+.++.+|.+.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 998888766 58888998864 488999999999987 9999999999999999 5778888888888888899877665
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
. ...++...+.+.. .+.++|+++|++|. ......+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus 191 ~--~~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 Y--REEDFVEVVKAET--GGKGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred c--CchhHHHHHHHHc--CCCCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehh
Confidence 3 3345555555442 34579999999996 577889999999999999986432 2234444455788888876532
Q ss_pred -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...+.+++++++++.+ .+..++.+++ +++.++++.+.+++..+|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence 1234667888888887 3445667788 99999999998887888999864
No 113
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=3.7e-26 Score=191.93 Aligned_cols=247 Identities=28% Similarity=0.403 Sum_probs=193.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|+++++|++||+|+.. ..|+|++|+.++.++++++|++
T Consensus 26 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 26 VLGGECAGVVTRVGPGVTGLAVGDRVMGL-----------------------------APGSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred CCCceeEEEEEeeCCCCcCCCCCCEEEEE-----------------------------cCCceeeEEEccHHHeEECCCC
Confidence 68999999999999999999999999863 2488999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--CEE
Q 022879 82 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--DNI 156 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~ 156 (290)
+++.+++.++ .+.++++++ +...++++++|+|+|+ |.+|++++++++..|+ .+++++.++++.+.++.+|. +.+
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 155 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHI 155 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhhe
Confidence 9999998774 777899887 4478899999999986 9999999999999999 58888888999999999997 666
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--CccccchhhhccCcEEEEe
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 234 (290)
+++ ...++.+.+.+.. .++++|+++|++|+ ......++.++++|+++.+|.... ...++... +.+.+.+.+.
T Consensus 156 ~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (288)
T smart00829 156 FSS--RDLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAV 229 (288)
T ss_pred eeC--CCccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEE
Confidence 653 3345666665542 45679999999995 678889999999999999986432 11222222 2344444443
Q ss_pred eec---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 235 FRY---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 235 ~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
... .+.+..++++++++.+.+ ...+.|++ ++++++++.+..+...+|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 230 DLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHHHHHHHHHhcCCCcceEeC
Confidence 211 234677888898888743 34466777 999999999988877778764
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=6.9e-26 Score=193.86 Aligned_cols=251 Identities=28% Similarity=0.386 Sum_probs=196.7
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|+++.+|++||+|+..... .....|+|++|+.+++++++++|++
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 60 ILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCC
Confidence 57999999999999999999999999974210 0123689999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++..++.++ .+.+||+++. ..+++++++++|+|+ |.+|++++++++.+|++ ++++..+ ++.++++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEe
Confidence 9998888764 7778998874 488999999999986 99999999999999994 7777677 8888888899887776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
.. .. +.+.+.++ ..+.++|+++|++++ ......+++++++|+++.++... . .+......+++.+.+....
T Consensus 195 ~~--~~-~~~~~~~~--~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YR--ET-VVEYVAEH--TGGRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLL 265 (326)
T ss_pred cc--hh-HHHHHHHh--cCCCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEccc
Confidence 32 23 55555554 245679999999997 57788999999999999998553 1 2222233566666554421
Q ss_pred -----------CCcHHHHHHHHHcCCCCCCCcee-eEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 -----------KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 -----------~~~l~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.+.++.++++++++.+. +.++ +.+++ +++.++++.+.+++..+|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence 34577888899898873 3333 67788 99999999998887789999875
No 115
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.95 E-value=3.5e-26 Score=197.89 Aligned_cols=249 Identities=26% Similarity=0.322 Sum_probs=188.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|+++++|++||+|++.+.. ...|+|++|+.+++++++++|++
T Consensus 76 ~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~ 130 (350)
T cd08248 76 TLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKN 130 (350)
T ss_pred eecceeEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCC
Confidence 68999999999999999999999999974321 13589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCC----CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIG----PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~----~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~ 154 (290)
+++.+++.+ ..+.++|+++.. ..+. ++++++|+|+ |++|++++++++.+|++ ++++.++ ++.+.++++|.+
T Consensus 131 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~ 208 (350)
T cd08248 131 LSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGAD 208 (350)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCc
Confidence 999988876 478889998865 5554 4999999986 99999999999999995 6666554 577788999988
Q ss_pred EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--c--ccc----chhhhc
Q 022879 155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--M--TVP----LTPAAV 226 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~--~~~----~~~~~~ 226 (290)
.+++.. ..++...+. ..+++|++||++|.+ ....++++++++|+++.+|..... . .+. .....+
T Consensus 209 ~~~~~~--~~~~~~~l~-----~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (350)
T cd08248 209 DVIDYN--NEDFEEELT-----ERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDL 280 (350)
T ss_pred eEEECC--ChhHHHHHH-----hcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHH
Confidence 777642 234443332 235799999999974 888999999999999999854211 0 110 001111
Q ss_pred ---------cCcE--EEEeeecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 227 ---------REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 227 ---------~~~~--i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
+... +.........++++++++++|.+ .+.+.+.|++ +++.++++.+.+++..+|++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 281 LKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 1111 11111124568899999999987 4446677888 9999999999888778888874
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=3e-25 Score=189.94 Aligned_cols=256 Identities=28% Similarity=0.397 Sum_probs=199.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|+++.+|++||+|+..+... ...+|++++|+.++++.++++|++
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 60 RLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCcceEEEEEeeCCCCCcCCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCC
Confidence 579999999999999999999999999753211 124589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++|+++.. ..+.++++++|+|+ |.+|++++++++..|+ .++.++.++++.+.++.+|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 998888766 588899998864 77889999999987 9999999999999999 5777778888888888899877776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~ 237 (290)
.+ ..++...+.+.. .+.++|++++++|+ ......+++++++|+++.+|.... ...++....+.+++.+.+....
T Consensus 196 ~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TD--EEDLVAEVLRIT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cC--CccHHHHHHHHh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecc
Confidence 43 345555555442 45579999999997 677889999999999999985432 2233333346677776665421
Q ss_pred ---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 238 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 238 ---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...++.+.+++.++.+. +.....|++ +++.++++.+.+++..+|++++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 23455566677777773 345566777 99999999998887888999864
No 117
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=1.2e-25 Score=189.04 Aligned_cols=247 Identities=26% Similarity=0.346 Sum_probs=193.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++++++||+|+.. ..|+|+||+.++.+.++++|++
T Consensus 30 ~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~ 80 (293)
T cd05195 30 PLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------------------APGAFATHVRVDARLVVKIPDS 80 (293)
T ss_pred ccceeeeEEEEeecCCccCCCCCCEEEEE-----------------------------ecCcccceEEechhheEeCCCC
Confidence 57999999999999999999999999863 2489999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEE
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNI 156 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~ 156 (290)
+++.+++.+ ..+.+++.++.. ..++++++++|+|+ |.+|++++++++.+|+ .++++..++++.+.++.++ ++.+
T Consensus 81 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (293)
T cd05195 81 LSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHI 159 (293)
T ss_pred CCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceE
Confidence 999988877 577889888754 78899999999976 9999999999999999 5888888888888888887 5666
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEe
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~ 234 (290)
++. ...++.+.++++. .+.++|+++|++|+. .....++.++++|+++.+|..... ..+.... +.+...+...
T Consensus 160 ~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 233 (293)
T cd05195 160 FSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSV 233 (293)
T ss_pred eec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEE
Confidence 653 3345555665542 456899999999975 889999999999999999864421 1222222 2233444332
Q ss_pred eec----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 235 FRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 235 ~~~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
... .+.+..++++++++.+ .+.....+.+ +++.++++.+.+++..+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 234 DLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred eHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhHHHHHHHHhcCCCCceecC
Confidence 211 2357788899999987 4455566777 999999999998877788764
No 118
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.3e-25 Score=192.88 Aligned_cols=244 Identities=25% Similarity=0.315 Sum_probs=187.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|+++++|++||+|++.. ..|+|++|+.++++.++++|++
T Consensus 60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 60 TPGYDLVGRVDALGSGVTGFEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred ccccceEEEEEEeCCCCccCCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCC
Confidence 679999999999999999999999999631 2488999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++|+++.. ..+.++++++|+|+ |.+|++++++++.+|+ .++++.. +++.++++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 999988766 588899998865 78999999999987 9999999999999999 5777766 88888888899654 33
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccc------------hhh
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPL------------TPA 224 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~------------~~~ 224 (290)
....++... +. .++++|+++|++|+. ....++++++++|+++.+|....... +.. ...
T Consensus 189 --~~~~~~~~~--~~---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T cd08273 189 --YRTKDWLPA--ML---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKL 260 (331)
T ss_pred --CCCcchhhh--hc---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcc
Confidence 222333322 12 235799999999975 58899999999999999986542211 110 001
Q ss_pred --hccCcEEEEeeec--------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 225 --AVREVDVVGVFRY--------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 225 --~~~~~~i~~~~~~--------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
..+.......... .+.++++++++++|.+. +.+.+.+++ ++++++++.+.+++..+|+|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 261 LPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLPL--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence 1122222222111 35688899999999884 446677888 999999999988888888875
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=1.9e-25 Score=190.67 Aligned_cols=250 Identities=33% Similarity=0.553 Sum_probs=201.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|+++.++++||+|+..+ ..|++++|+.++.+.++++|++
T Consensus 60 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 60 VPGSEVAGVVEAVGEGVTGFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred cccceeEEEEEEeCCCCCCCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCC
Confidence 579999999999999999999999999642 2588999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
++..+++.+ ..+.+|++++. ...++++++++|+|+ |.+|++++++++..|+ .++.++.++++.+.++.+|.+.+++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 998888755 58888998886 478899999999998 9999999999999999 5788888888889888899877765
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc-ccchhhhccCcEEEEeeec
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~ 237 (290)
. ...++.+.+.++. .++++|+++|++|+ ..+..++++++++|+++.+|....... +.......+++++.+....
T Consensus 191 ~--~~~~~~~~i~~~~--~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd08241 191 Y--RDPDLRERVKALT--GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWG 265 (323)
T ss_pred c--CCccHHHHHHHHc--CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecc
Confidence 3 3345666665542 45679999999997 678889999999999999986433222 2233455677777776432
Q ss_pred ----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879 238 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289 (290)
Q Consensus 238 ----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~ 289 (290)
.+.++++++++.++.+ .+.....|++ +++.++++.+.+++..+|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 266 AYARREPELLRANLAELFDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccchhHHHHHHHHHHHHHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence 2457789999999987 4446677888 9999999998888778888864
No 120
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=2.9e-25 Score=190.19 Aligned_cols=251 Identities=21% Similarity=0.296 Sum_probs=190.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|++ ++++++++||+|++.... . ....+|+|++|+.++.++++++|++
T Consensus 60 ~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 60 VPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred ccccceEEEEEe--CCCCCCCCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCC
Confidence 469999999998 777889999999974210 0 0113689999999999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHH---hcCCC-CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879 82 VSLEEGAMCE-PLSVGVHACR---RANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~---~~~~~-~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 155 (290)
+++.+++.++ .+++++.+++ ..... +++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 9999888774 6667776654 34445 5789999998 9999999999999999 4788778899999999999988
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~ 234 (290)
++++.. +...++.+ ...++|.++|+++. ......+..++.+|+++.+|.... ....+...+..++.++.+.
T Consensus 195 ~~~~~~----~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08288 195 IIDRAE----LSEPGRPL---QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGI 266 (324)
T ss_pred EEEcch----hhHhhhhh---ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEE
Confidence 887532 22233333 23458999999996 467788888999999999986422 1123333444778888876
Q ss_pred eec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 235 FRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 235 ~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
... .+.++.+.+++.++.+ .+ +.+.+++ +++.+|++.+.+++..+|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 267 DSVMAPIERRRAAWARLARDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred EeecccchhhHHHHHHHHHHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence 432 2346667778888877 33 3567788 99999999999998899999874
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2e-25 Score=190.50 Aligned_cols=249 Identities=29% Similarity=0.363 Sum_probs=185.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+++|++++++++||+|+...+. ...|+|++|+.++.+.++++|++
T Consensus 61 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~ip~~ 115 (319)
T cd08267 61 IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-------------------------KGGGALAEYVVAPESGLAKKPEG 115 (319)
T ss_pred cccceeeEEEEEeCCCCCCCCCCCEEEEeccC-------------------------CCCceeeEEEEechhheEECCCC
Confidence 47999999999999999999999999874321 13589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.+||+++.. ..++++++++|+|+ |++|++++++++.+|+ .++++..+ ++.++++++|.+.+++
T Consensus 116 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 193 (319)
T cd08267 116 VSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVID 193 (319)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeec
Confidence 999888866 478889999876 56899999999997 9999999999999999 57776655 7788889999887776
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEeccCCCCccccc-----hh-hhccCcEE
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPL-----TP-AAVREVDV 231 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~~-~~~~~~~i 231 (290)
... .++. .. .+.++++|++++|+|+. ......+..++++|+++.+|.......... .. ...+.+..
T Consensus 194 ~~~--~~~~---~~--~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (319)
T cd08267 194 YTT--EDFV---AL--TAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKF 266 (319)
T ss_pred CCC--CCcc---hh--ccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEE
Confidence 432 2332 11 23456899999999852 222333344999999999986432211111 11 11122222
Q ss_pred EEeeecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 232 VGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 232 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.......+.+++++++++++.+ .+...+.|++ +++++|++.+.+++..+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~--~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 267 FLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL--EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred EEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH--HHHHHHHHHHhcCCCCCcEeC
Confidence 2221125678899999999987 4446677888 999999999998877788774
No 122
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=4.4e-25 Score=188.94 Aligned_cols=253 Identities=26% Similarity=0.350 Sum_probs=193.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|++++++++||+|++... ...+|+|++|+.+++++++++|++
T Consensus 59 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~ 113 (325)
T cd08271 59 VPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDS 113 (325)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCC
Confidence 5799999999999999999999999997421 113589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++.+++.+ ..+.++++++.. +.++++++++|+|+ +.+|++++++++..|++ ++++. ++++.++++.+|.+.+++
T Consensus 114 ~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~ 191 (325)
T cd08271 114 LSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVID 191 (325)
T ss_pred CCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEec
Confidence 999988866 588889999865 78899999999998 89999999999999995 66665 667778888899887765
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccchhhhccCcEEEEeee
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFR 236 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~ 236 (290)
....++...+.++. .++++|++++++++. .....+++++++|+++.++....... .....+.++.+++.....
T Consensus 192 --~~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T cd08271 192 --YNDEDVCERIKEIT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHD 266 (325)
T ss_pred --CCCccHHHHHHHHc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEeccccc
Confidence 33345555565542 456799999999974 55678999999999999974322111 011123334444433322
Q ss_pred c---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 237 Y---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 237 ~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
. .+.+.+++++++++.+. +...+.+++ +++.++++.+.+++..+|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 267 HGDPAAWQDLRYAGEELLELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccchhhHHHHHHHHHHHHHHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence 1 23457788999998884 334566777 99999999999888888999864
No 123
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=8.3e-25 Score=188.13 Aligned_cols=249 Identities=29% Similarity=0.382 Sum_probs=194.6
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|+|++|+|+.+|++++++++||+|+.. ..+|+|++|+.++.++++++|++
T Consensus 59 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~ 110 (337)
T cd08275 59 VPGFECAGTVEAVGEGVKDFKVGDRVMGL----------------------------TRFGGYAEVVNVPADQVFPLPDG 110 (337)
T ss_pred CCcceeEEEEEEECCCCcCCCCCCEEEEe----------------------------cCCCeeeeEEEecHHHeEECCCC
Confidence 67999999999999999999999999963 23489999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHHcCCCEEE
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~ 157 (290)
+++.+++.+ ..+.++|+++.. ..++++++|+|+|+ |.+|++++++++.+ . .+.+++ ..+++.++++.+|.+.++
T Consensus 111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~ 188 (337)
T cd08275 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVI 188 (337)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999888866 488889998754 78899999999998 99999999999998 2 233332 345677888889988777
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--cccc---------------
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVP--------------- 220 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~--------------- 220 (290)
+. ...++...++++. ++++|+++|++|+ ......+++++++|+++.+|..... ....
T Consensus 189 ~~--~~~~~~~~~~~~~---~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
T cd08275 189 DY--RTQDYVEEVKKIS---PEGVDIVLDALGG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVD 262 (337)
T ss_pred eC--CCCcHHHHHHHHh---CCCceEEEECCcH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccC
Confidence 63 3456666666653 4679999999997 5778899999999999999854321 1111
Q ss_pred chhhhccCcEEEEeeec---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 221 LTPAAVREVDVVGVFRY---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 221 ~~~~~~~~~~i~~~~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
...++.+++++.+.... ...+.+++++++++.+ .+.....|++ ++++++++.+.+++..+|+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 263 PMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 12345666776665421 1246778888989887 4445667888 99999999999888889999875
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.94 E-value=5.8e-25 Score=186.67 Aligned_cols=243 Identities=28% Similarity=0.354 Sum_probs=189.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|||++|+|+.+|++++++++||+|+..+.. ...|+|++|+.++...++++|++
T Consensus 62 ~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~ 116 (309)
T cd05289 62 IPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPAN 116 (309)
T ss_pred ccccceeEEEEeeCCCCCCCCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCC
Confidence 57999999999999999999999999975321 12589999999999999999999
Q ss_pred CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879 82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 158 (290)
+++..++.+ ..+.++++++.. ..+.++++++|+|+ |.+|++++++++..|++ ++++..++ +.++++.+|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~ 194 (309)
T cd05289 117 LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVID 194 (309)
T ss_pred CCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEe
Confidence 999888876 477788988866 55899999999997 99999999999999995 66666666 778888899877766
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (290)
.. ..++.+ ...+.++|+++|++|+ .....++++++++|+++.+|....... ....++.++......
T Consensus 195 ~~--~~~~~~------~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~ 261 (309)
T cd05289 195 YT--KGDFER------AAAPGGVDAVLDTVGG-ETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEP 261 (309)
T ss_pred CC--CCchhh------ccCCCCceEEEECCch-HHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecc
Confidence 33 223322 1245679999999997 478899999999999999986433111 222334444333222
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
.+.+++++++++++.+ .+.+++.|++ ++++++++.+..++..+|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 262 DGEQLAELAELVEAGKL--RPVVDRVFPL--EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cHHHHHHHHHHHHCCCE--EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence 4578889999999987 4446677888 999999999988877778764
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=6.6e-25 Score=175.07 Aligned_cols=242 Identities=17% Similarity=0.197 Sum_probs=191.9
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc--eEECCC--C
Q 022879 6 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD--N 81 (290)
Q Consensus 6 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~~P~--~ 81 (290)
.++|+|++. +-+.+++||.|++. =+|.||.+++++. .+++|. +
T Consensus 78 ~GV~kVi~S--~~~~~~~GD~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~ 124 (343)
T KOG1196|consen 78 FGVAKVIDS--GHPNYKKGDLVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTD 124 (343)
T ss_pred CceEEEEec--CCCCCCcCceEEEe-------------------------------ccceEEEEecCcchhcccCCCCCc
Confidence 678999884 55679999999974 2699999998764 445544 3
Q ss_pred CChhhhh-hh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEE
Q 022879 82 VSLEEGA-MC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNI 156 (290)
Q Consensus 82 ~~~~~aa-~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~ 156 (290)
++..-.. .+ ++..|||-.+.. +.+++|++|+|.|| |++|+++.|+|+.+|+ .|++...+++|.++++. +|.+..
T Consensus 125 ~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~a 203 (343)
T KOG1196|consen 125 VPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDA 203 (343)
T ss_pred cCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccc
Confidence 4433333 22 588899998854 88999999999987 9999999999999999 79999999999998865 799989
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Ccccc---chhhhccCcE
Q 022879 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMTVP---LTPAAVREVD 230 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~---~~~~~~~~~~ 230 (290)
++|.. +.+..+++++. ...++|+.||++|+ ..++..+..|+..||++.+|.-+. +.+.. +..++.++++
T Consensus 204 fNYK~-e~~~~~aL~r~---~P~GIDiYfeNVGG-~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~ 278 (343)
T KOG1196|consen 204 FNYKE-ESDLSAALKRC---FPEGIDIYFENVGG-KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIR 278 (343)
T ss_pred eeccC-ccCHHHHHHHh---CCCcceEEEeccCc-HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEE
Confidence 98743 34777777764 57899999999998 799999999999999999996441 22222 2346789999
Q ss_pred EEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 231 VVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 231 i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
+.+..-. .+.++.+..++++|+++....+.. ++ ++.++|+..|-.++..||.++++
T Consensus 279 iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~--Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 279 IQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIAD--GL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred eeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHH--HH--hccHHHHHHHhccCcccceEEEe
Confidence 9886432 567888999999999976554432 57 99999999999999999998864
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.93 E-value=1.1e-25 Score=205.46 Aligned_cols=243 Identities=22% Similarity=0.321 Sum_probs=193.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 81 (290)
Q Consensus 2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~ 81 (290)
++|.||+|+ .+-|.||.++.. .-++++.+.++.+.+|.+|.+
T Consensus 1483 lLGmEFsGR----------d~~GrRvM~mvp----------------------------AksLATt~l~~rd~lWevP~~ 1524 (2376)
T KOG1202|consen 1483 LLGMEFSGR----------DASGRRVMGMVP----------------------------AKSLATTVLASRDFLWEVPSK 1524 (2376)
T ss_pred eeceeeccc----------cCCCcEEEEeee----------------------------hhhhhhhhhcchhhhhhCCcc
Confidence 478888887 455899987532 356888899999999999999
Q ss_pred CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEE-CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cC---CC
Q 022879 82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IG---AD 154 (290)
Q Consensus 82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~-Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg---~~ 154 (290)
...++|++.| .|+|+||++- +.+.++|++|||| |+|++|++||.+|.+.|+ .|+++..++||++++.. |+ ..
T Consensus 1525 WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~ 1603 (2376)
T KOG1202|consen 1525 WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQET 1603 (2376)
T ss_pred cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhh
Confidence 9999999886 8889999985 4899999999999 559999999999999999 57777788888887754 43 33
Q ss_pred EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEE
Q 022879 155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVG 233 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~ 233 (290)
++- ++++.+|...+ +.+++|+|+|+|++.... +.++..+++|+.+||+..+|-......-++ ...+.++.++.|
T Consensus 1604 ~~~--NSRdtsFEq~v--l~~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHG 1678 (2376)
T KOG1202|consen 1604 NFA--NSRDTSFEQHV--LWHTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHG 1678 (2376)
T ss_pred ccc--ccccccHHHHH--HHHhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceee
Confidence 332 35667776555 446789999999999984 789999999999999999996554333333 346778888888
Q ss_pred eeec------CCcHHHHHHHHHcCCCC--CCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879 234 VFRY------KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290 (290)
Q Consensus 234 ~~~~------~~~l~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~ 290 (290)
.... .+.+.++..++++|.-. ..|..+++|.- .++++||+.|.++++.||+|+++
T Consensus 1679 iLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1679 ILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred eehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence 7543 45677777777765442 36777788877 99999999999999999999974
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=1.2e-17 Score=123.78 Aligned_cols=128 Identities=28% Similarity=0.548 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHH
Q 022879 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA 197 (290)
Q Consensus 118 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 197 (290)
++|++++|+|+++|+ ++++++++++|+++++++|++.+++++ +.++.+.+++++ ++.++|++|||+|.+..++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--cccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence 589999999999996 799999999999999999999998854 456888888774 456899999999988899999
Q ss_pred HHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-CCcHHHHHHHHHc
Q 022879 198 LGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS 250 (290)
Q Consensus 198 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~ 250 (290)
+++++++|+++.+|... ....++...++++++++.+++.+ .++++++++++.+
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 99999999999999776 66678888899999999999988 4889999888764
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.70 E-value=1.9e-17 Score=118.59 Aligned_cols=77 Identities=38% Similarity=0.726 Sum_probs=70.4
Q ss_pred CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEEC
Q 022879 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 78 (290)
Q Consensus 1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~ 78 (290)
+|+|||++|+|+++|+++++|++||+|.+.+...|+.|.+|..+..++|+....++.. .+|+|+||+.+++++++++
T Consensus 33 ~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 33 LILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp EES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred cccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 4799999999999999999999999999999999999999999999999999888764 8999999999999999875
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.50 E-value=1e-12 Score=113.89 Aligned_cols=164 Identities=20% Similarity=0.275 Sum_probs=130.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.-+|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+.+.++.+|+..+ + ..+.+ .+.|++
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--------~~aDVV 261 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--------KEGDIF 261 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH--------cCCCEE
Confidence 3589999999999999999999999999 68889999999999999997432 1 11111 358999
Q ss_pred EEccCCHHHHHHH-HHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--CCcHH--HHHHHHHcCCC-CCCCc
Q 022879 185 FDCAGLNKTMSTA-LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWP--LCLELLRSGKI-DVKPL 258 (290)
Q Consensus 185 id~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~--~~~~~~~~g~~-~~~~~ 258 (290)
|+|+|.+..+... +..++++|.++.+|.. +..++...+..+.+++.+.+.+ ...++ .++.++.+|.+ ++...
T Consensus 262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~ 339 (413)
T cd00401 262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA 339 (413)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence 9999988777765 8999999999999954 4467777788899999998887 22566 79999999999 77766
Q ss_pred eeeE-----eeCChh-hHHHHHHHHhcCCC-ceeEEEe
Q 022879 259 VTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMFN 289 (290)
Q Consensus 259 ~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gk~vl~ 289 (290)
+++. ++| + ++.++++.+.+... ..|+++.
T Consensus 340 ~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 340 TGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred CCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEEC
Confidence 6665 556 8 99999988877643 3566653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.48 E-value=1.6e-12 Score=115.35 Aligned_cols=155 Identities=17% Similarity=0.260 Sum_probs=114.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EecCCC-----------cccHHHHHHH
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-----------LQDIAEEVEK 172 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~-----------~~~~~~~~~~ 172 (290)
..++++|+|.|+|.+|+++++.|+.+|+ .|++++.++++.+.++++|++.+ ++.... .+++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4589999999999999999999999999 69999999999999999999854 432111 0122222222
Q ss_pred HHHHhCCCccEEEEccCCH-----HH-HHHHHHHhccCCEEEEeccC-CCC--ccccchhhhc-cCcEEEEeeecCCcHH
Q 022879 173 IQKAMGTGIDVSFDCAGLN-----KT-MSTALGATCAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTWP 242 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~l~ 242 (290)
......+++|++|+|+|.+ .. ..++++.++++|+++.++.. +.. .+.+...++. +++++.|.++....+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 2222235799999999963 25 48999999999999999964 332 3444445665 8999999887744454
Q ss_pred -HHHHHHHcCCCCCCCcee
Q 022879 243 -LCLELLRSGKIDVKPLVT 260 (290)
Q Consensus 243 -~~~~~~~~g~~~~~~~~~ 260 (290)
++.+++.++.+++.+.++
T Consensus 321 ~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 321 TQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHhCCccHHHHhc
Confidence 699999999886555544
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.40 E-value=1.4e-13 Score=101.38 Aligned_cols=117 Identities=26% Similarity=0.375 Sum_probs=78.8
Q ss_pred cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC--CHHHHHHHHHHhccCCEEEEeccCCCCccccchh--hhc
Q 022879 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAV 226 (290)
Q Consensus 151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~ 226 (290)
||++++++|+ .+++ ...+++|+|||++| .+..+..++++| ++|+++.++. ...... ...
T Consensus 1 LGAd~vidy~--~~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYR--DTDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETT--CSHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred CCcCEEecCC--Cccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence 6899999875 3444 24678999999999 644446777788 9999999984 111111 112
Q ss_pred cCcEEEEeee------cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879 227 REVDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288 (290)
Q Consensus 227 ~~~~i~~~~~------~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl 288 (290)
..++...... ..+.++++.+++++|++ ++.+.++|++ +++++|++.+++++..||+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 2333333331 24569999999999999 7788899999 999999999999999999996
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.70 E-value=7.5e-07 Score=79.44 Aligned_cols=105 Identities=20% Similarity=0.282 Sum_probs=80.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-------------cccHHHHHHH
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDIAEEVEK 172 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~~~~~~~ 172 (290)
.++.+++|.|+|.+|++++++++.+|+ .|++.+.++++++.++.+|.+.+. .+.. .+++.+...+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~-v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccccceeecCHHHHHHHHH
Confidence 367899999999999999999999999 588999999999999999987532 2211 1233333333
Q ss_pred HHHHhCCCccEEEEcc---CCHH---HHHHHHHHhccCCEEEEecc
Q 022879 173 IQKAMGTGIDVSFDCA---GLNK---TMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~ 212 (290)
+.....+++|++|+|+ |.+. .....++.+++++.+++++.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 3333356799999999 5433 45678999999999999974
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.57 E-value=9.2e-07 Score=73.88 Aligned_cols=171 Identities=19% Similarity=0.260 Sum_probs=104.2
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
+.++++++||..|+|+ |..++++++..|.. .+++++.+++..+.+++. +...+... ..+ +.++. ..
T Consensus 73 ~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d----~~~l~-~~ 143 (272)
T PRK11873 73 AELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGE----IEALP-VA 143 (272)
T ss_pred ccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecc----hhhCC-CC
Confidence 5688999999999877 88888888887764 699999999998888663 33222111 112 12111 12
Q ss_pred CCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEe-eecCCcHHHHHHHHHc
Q 022879 178 GTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELLRS 250 (290)
Q Consensus 178 ~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~~~~~~~~~ 250 (290)
...||+|+... .....+..+.+.|+++|+++..+..... .+ .....+...+.+. .......++..+++++
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 220 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLAE 220 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHHH
Confidence 34799998643 2345788999999999999987654322 11 1111122222111 1123456677777876
Q ss_pred CCC-CCCCceeeEeeCChhhHHHHHHHH--hcCCCceeEE
Q 022879 251 GKI-DVKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVM 287 (290)
Q Consensus 251 g~~-~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~v 287 (290)
..+ .........+.+ ++..++++.+ .+++..++.+
T Consensus 221 aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 221 AGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred CCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence 444 223333345566 8888999888 5544444444
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.41 E-value=7.8e-06 Score=71.64 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=77.5
Q ss_pred HHHHHHhc-CCC-CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHH
Q 022879 96 GVHACRRA-NIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173 (290)
Q Consensus 96 a~~~l~~~-~~~-~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 173 (290)
+|.++..+ .+. .|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|.. +. ++ .+.
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l----~ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TM----EEA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CH----HHH
Confidence 34444443 444 89999999999999999999999999 688898888887666666643 21 11 222
Q ss_pred HHHhCCCccEEEEccCCHHHHH-HHHHHhccCCEEEEeccCCC
Q 022879 174 QKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 174 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 215 (290)
. .+.|++|+++|....+. ..+..+++++.++..|....
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 1 36899999999876666 57888999999999986553
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.38 E-value=4.8e-05 Score=64.11 Aligned_cols=112 Identities=17% Similarity=0.198 Sum_probs=81.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.+.+++|.|.|.+|..+++.++.+|+ .|.+.++++++.+.++.+|...+ .+ + .+.+. -.++|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHH----hCCCCEEEE
Confidence 68999999999999999999999999 68888999888888888886532 11 1 22222 146999999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEe
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 234 (290)
|++..-.....++.+++++.++.++.......+ ...-.+.+++.+.
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~ 262 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLA 262 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEE
Confidence 998643445677889999999999865443333 2333455555543
No 136
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.37 E-value=2.9e-05 Score=63.97 Aligned_cols=130 Identities=22% Similarity=0.319 Sum_probs=85.3
Q ss_pred cceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879 64 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY 143 (290)
Q Consensus 64 ~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~ 143 (290)
|.+|.. +...++.+++++++..+....+ ..++..+.. ...++.+||-.|+|+ |..++.+++ .|...+++++.++.
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h~tt-~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~ 153 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTHPTT-RLCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQ 153 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCCHHH-HHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHH
Confidence 555544 6677899999999887763322 223333332 256889999999987 887776554 67767999999999
Q ss_pred HHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879 144 RLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 144 ~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
..+.+++. +....+.... ....||+|+.+.... ..+..+.+.|+++|.++..|..
T Consensus 154 ~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 154 AVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 88877552 2211111000 111599998776542 2456788889999999987643
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.32 E-value=2.3e-06 Score=72.71 Aligned_cols=107 Identities=24% Similarity=0.317 Sum_probs=79.7
Q ss_pred ceEECCCCCChhhhhhhhhhHHHHHHHHhcCC----CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHH
Q 022879 74 LCFKLPDNVSLEEGAMCEPLSVGVHACRRANI----GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVA 148 (290)
Q Consensus 74 ~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~----~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~ 148 (290)
..+++|+.+..+.++...+.++++.+++.+.. -++.+|+|.|+|.+|..+++.++..|.+.++++++++++. +++
T Consensus 140 ~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la 219 (311)
T cd05213 140 KAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELA 219 (311)
T ss_pred HHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 45777888888888877777778777765322 4789999999999999999999988887888899988764 677
Q ss_pred HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHH
Q 022879 149 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 193 (290)
Q Consensus 149 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 193 (290)
+++|.. ++++ ++ +.+.. ...|+||.|++.+..
T Consensus 220 ~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~ 251 (311)
T cd05213 220 KELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY 251 (311)
T ss_pred HHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence 888873 3221 11 22211 348999999998654
No 138
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.28 E-value=9.1e-08 Score=84.44 Aligned_cols=157 Identities=22% Similarity=0.265 Sum_probs=101.6
Q ss_pred ccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEE---C-C
Q 022879 4 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK---L-P 79 (290)
Q Consensus 4 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~---~-P 79 (290)
|.|+++.+.+|+.+.++ +|++.+.. |+.|.+| .+.|......|. ..++.|++++.++. .+.. + +
T Consensus 91 ~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~i~~ 158 (417)
T TIGR01035 91 GESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETDISA 158 (417)
T ss_pred chHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcCCCC
Confidence 56677777777777765 56666666 7777777 334544444432 45789999988876 3322 2 2
Q ss_pred CCCChhhhhhhhhhHHHHH-HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEE
Q 022879 80 DNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIV 157 (290)
Q Consensus 80 ~~~~~~~aa~~~~~~ta~~-~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~ 157 (290)
..++...+| .. +.+.....++++++|.|+|.+|..+++.++..|+..+++++++.++.+ +++.++.. .+
T Consensus 159 ~~vSv~~~A--------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i 229 (417)
T TIGR01035 159 GAVSISSAA--------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AV 229 (417)
T ss_pred CCcCHHHHH--------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-Ee
Confidence 223322221 11 122334467899999999999999999999999768888889887754 66777753 22
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHH
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 193 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 193 (290)
.+ .+ +.+.. .++|+||+|++.+..
T Consensus 230 ~~----~~----l~~~l----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 230 KF----ED----LEEYL----AEADIVISSTGAPHP 253 (417)
T ss_pred eH----HH----HHHHH----hhCCEEEECCCCCCc
Confidence 21 12 22221 358999999987543
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.18 E-value=3.9e-05 Score=66.91 Aligned_cols=93 Identities=22% Similarity=0.272 Sum_probs=72.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.-.|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|.. +. +..+.+ .+.|++
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal--------~~aDVV 254 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA--------KIGDIF 254 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH--------hcCCEE
Confidence 3689999999999999999999999999 588898888877666666652 21 111111 347999
Q ss_pred EEccCCHHHHHH-HHHHhccCCEEEEeccCC
Q 022879 185 FDCAGLNKTMST-ALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 185 id~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 214 (290)
|+++|....+.. .+..+++++.++..|...
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 999998777764 888999999999998654
No 140
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.12 E-value=0.0015 Score=54.84 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=104.2
Q ss_pred EEEEEeCCCCCCCCCCCEEEEcCCcCCC-CChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCCChhhh
Q 022879 9 GVIEKVGSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG 87 (290)
Q Consensus 9 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a 87 (290)
++|++ ++++++.+|.||+++-..... ..........++.+.+.- .....-.|-+|.++..+..+. -+.+..
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~h--R~~l~~~YN~Y~r~~~d~~y~----~~~e~~ 110 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPH--RAGLPPIYNQYLRVSADPAYD----PEREDW 110 (314)
T ss_pred EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhh--hCcCchhhhceeecCCCcccC----cchhHH
Confidence 66776 888999999999985322110 000000000111110000 011223455555555443321 122222
Q ss_pred -hhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHcC-CCEEEec
Q 022879 88 -AMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKV 159 (290)
Q Consensus 88 -a~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~ 159 (290)
+++ +.+.|.|..-+- ...-..+.|+|.+| +-.+...+..++ ..+..+++++ +|+.+.++.+.+| .+.++.|
T Consensus 111 ~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vgl-TS~~N~~Fve~lg~Yd~V~~Y 189 (314)
T PF11017_consen 111 QMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGL-TSARNVAFVESLGCYDEVLTY 189 (314)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEE-ecCcchhhhhccCCceEEeeh
Confidence 233 567777755432 22345567788877 777877777777 4555478888 5566777999999 5566665
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCC-EEEEeccC
Q 022879 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMG 213 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~ 213 (290)
+. +..+ ....--+++|..|..+....+...++..= ..+.+|..
T Consensus 190 d~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 190 DD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred hh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 42 3333 23456789999999888778888887653 45566643
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.06 E-value=6.3e-05 Score=66.32 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=72.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
-.|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|... . +..+.+ ...|+++
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal--------~~ADVVI 314 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVV--------SEADIFV 314 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHH--------hhCCEEE
Confidence 468999999999999999999999999 6888988887766666666542 1 111111 2479999
Q ss_pred EccCCHHHH-HHHHHHhccCCEEEEeccCC
Q 022879 186 DCAGLNKTM-STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 186 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 214 (290)
.+.|....+ ...++.+++++.++.+|...
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999986553 78999999999999999743
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=7.3e-05 Score=58.62 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=80.1
Q ss_pred hhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEecC-CCc
Q 022879 89 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVS-TNL 163 (290)
Q Consensus 89 ~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~-~~~ 163 (290)
+++.......+++...++++++||-.|+|+ |+.++-+++..| .|+.++..++=.+ .++.+|...+.... +..
T Consensus 54 tis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~ 130 (209)
T COG2518 54 TISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS 130 (209)
T ss_pred eecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence 443333344466677899999999999987 999999999988 6999999887444 34668864443322 111
Q ss_pred ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879 164 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
..|. ...+||.|+-+.+.++.-..+++.|+++|+++.--.
T Consensus 131 ~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 131 KGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred cCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 2221 236899999888876666789999999999987643
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.91 E-value=0.00013 Score=63.41 Aligned_cols=96 Identities=22% Similarity=0.318 Sum_probs=67.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
++.+++|.|+|.+|+.+++.++.+|+ .|+++++++++.+.+. .++......+ . + .+.+.+.. ..+|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~-~~~l~~~l----~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---N-AYEIEDAV----KRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---C-HHHHHHHH----ccCCEEE
Confidence 34669999999999999999999999 5888999888877664 4554321111 1 1 12233321 3689999
Q ss_pred EccCC-----HH-HHHHHHHHhccCCEEEEecc
Q 022879 186 DCAGL-----NK-TMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 186 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~ 212 (290)
++++. +. .....++.+++++.++.++.
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 99832 11 13567788999999999884
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.87 E-value=0.00044 Score=65.40 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=82.6
Q ss_pred cccceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Q 022879 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV 140 (290)
Q Consensus 62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~ 140 (290)
.++.+|..+++..++.+ +.++.+++.... .......+++++||+|+ |++|...++.+...|+ .|+.+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 34456666666655555 444444443110 00112236789999987 9999999999999999 6888888
Q ss_pred ChhHHHHH-HHcCC---CEEEecCCCc-ccHHHHHHHHHHHhCCCccEEEEccCCH------------------------
Q 022879 141 DDYRLSVA-KEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLN------------------------ 191 (290)
Q Consensus 141 ~~~~~~~~-~~lg~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~------------------------ 191 (290)
++++.+.+ +.++. ...+..+-.+ ++..+.+++..+ ..+++|++|+++|..
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~-~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL-AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 88776544 33442 1122222222 223333333322 234799999999831
Q ss_pred -HHHHHHHHHhcc---CCEEEEeccC
Q 022879 192 -KTMSTALGATCA---GGKVCLVGMG 213 (290)
Q Consensus 192 -~~~~~~~~~l~~---~G~~v~~g~~ 213 (290)
...+.++..+++ +|+++.++..
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 123334555555 5889988753
No 145
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.85 E-value=5.1e-05 Score=67.37 Aligned_cols=158 Identities=21% Similarity=0.274 Sum_probs=92.9
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCC
Q 022879 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 82 (290)
Q Consensus 3 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~ 82 (290)
-|+|+++.+.+|+.+..+.-+|+.- . |+. |.. ..+.|......+. ..++.|++++.+ |+.+
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQ---vk~-a~~~a~~~g~~g~-~l~~lf~~a~~~--------~k~v 152 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQ---VKD-AYALAQEAGTVGT-ILNRLFQKAFSV--------AKRV 152 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCChH-----H-HHH---HHH-HHHHHHHcCCchH-HHHHHHHHHHHH--------HhhH
Confidence 3777777777777777664444322 1 121 111 1111221111111 234555554433 4444
Q ss_pred ChhhhhhhhhhHHHHHHHHhc----CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEE
Q 022879 83 SLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIV 157 (290)
Q Consensus 83 ~~~~aa~~~~~~ta~~~l~~~----~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~ 157 (290)
..+.+..-.+.++++++++.+ ...++.+++|.|+|.+|..+++.++..|++.+++++++.++.+ +++.+|.. ++
T Consensus 153 ~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~ 231 (423)
T PRK00045 153 RTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AI 231 (423)
T ss_pred hhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-Ee
Confidence 433333333566667676542 2357899999999999999999999999877888889887755 77778753 22
Q ss_pred ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH
Q 022879 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 192 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 192 (290)
++ .+ +.+. -.++|+||+|+|.+.
T Consensus 232 ~~----~~----~~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 232 PL----DE----LPEA----LAEADIVISSTGAPH 254 (423)
T ss_pred eH----HH----HHHH----hccCCEEEECCCCCC
Confidence 21 11 2221 136899999999754
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.80 E-value=2.4e-05 Score=72.22 Aligned_cols=81 Identities=22% Similarity=0.393 Sum_probs=56.8
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC---------------------hhHHHHHHHcCCCEEEecCCC
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---------------------DYRLSVAKEIGADNIVKVSTN 162 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~ 162 (290)
..++|++|+|.|+|++|+++++.++..|+ .|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 35789999999999999999999999999 47777642 34566778899776554211
Q ss_pred cccHHHHHHHHHHHhCCCccEEEEccCCHH
Q 022879 163 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 192 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 192 (290)
..+.. ..+. ..++|++|+++|...
T Consensus 211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 GEDIT--LEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CCcCC--HHHH----HhhCCEEEEeeCCCC
Confidence 01211 1111 135999999999753
No 147
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.73 E-value=0.00099 Score=59.08 Aligned_cols=93 Identities=22% Similarity=0.282 Sum_probs=71.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.-.|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. . ++ .++. ...|+|
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~l----eell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TL----EDVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cH----HHHH----hcCCEE
Confidence 4479999999999999999999999999 6888877777664444455431 1 12 2221 358999
Q ss_pred EEccCCHHHHH-HHHHHhccCCEEEEeccCC
Q 022879 185 FDCAGLNKTMS-TALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 185 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 214 (290)
+.++|....+. ..+..+++++.++.+|...
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 99999766664 7899999999999998654
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.73 E-value=0.00065 Score=57.02 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=70.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.+++++|.|.|.+|.++++.++.+|+ .|.+.++++++.+.+.+.+...+ . + +.+.+. -...|+||+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEEE
Confidence 57899999999999999999999999 68888888887776666664321 1 1 122222 146899999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEeccCCCCccc
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 219 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 219 (290)
+++..-.-...++.++++..++.++.......+
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 997532224566778888888888765443333
No 149
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.69 E-value=0.00059 Score=57.44 Aligned_cols=127 Identities=18% Similarity=0.223 Sum_probs=76.4
Q ss_pred CceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-
Q 022879 73 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI- 151 (290)
Q Consensus 73 ~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l- 151 (290)
.....+.+++.+..+.. ++...+..++.. ...++++||-.|+|+ |..++.+++ .|...+++++.++...+.+++.
T Consensus 127 ~~~i~ldpg~aFgtG~h-~tt~l~l~~l~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~ 202 (288)
T TIGR00406 127 ALIIMLDPGLAFGTGTH-PTTSLCLEWLED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNA 202 (288)
T ss_pred cEEEEECCCCcccCCCC-HHHHHHHHHHHh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHH
Confidence 34455666665554432 111122333333 245789999999987 877777665 5777899999999887776542
Q ss_pred ---CCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879 152 ---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 152 ---g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+.. .+..... + ... ....+||+|+...... ..+..+.+.|+++|.++..|..
T Consensus 203 ~~n~~~~~~~~~~~---~----~~~---~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 203 ELNQVSDRLQVKLI---Y----LEQ---PIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHcCCCcceEEEec---c----ccc---ccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 211 1111111 1 000 1235799999866543 3456678899999999987643
No 150
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.69 E-value=0.00029 Score=52.19 Aligned_cols=74 Identities=24% Similarity=0.342 Sum_probs=53.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
-.+.+++|.|+|++|.+++..+...|++.+..+.++.+|.+.+ +.++.. ..+.++ ++.+.+ ..+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~--------~~~D 77 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEAL--------QEAD 77 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHH--------HTES
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHH--------hhCC
Confidence 3688999999999999999999999998899999998876644 556432 233322 221111 3599
Q ss_pred EEEEccCCH
Q 022879 183 VSFDCAGLN 191 (290)
Q Consensus 183 ~vid~~g~~ 191 (290)
+||+|++.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999999874
No 151
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.68 E-value=0.00052 Score=56.28 Aligned_cols=84 Identities=24% Similarity=0.279 Sum_probs=58.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-----CEEEecCCCcccHHHHHHHHHHHhC
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
..+.++||+|| +++|...+..+...|. .++.+.+++++++.+ +++.- ..++..|-.+.+-.+.+.+-....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999999 9999999999999999 688888999987755 33331 1345444333333334433323344
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
..+|+.++++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 589999999986
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.67 E-value=0.0023 Score=52.02 Aligned_cols=105 Identities=21% Similarity=0.214 Sum_probs=65.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADNIVKVSTNL-QDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (290)
+++++||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +.+ +....+..+-.+ ++..+.+++... .-.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAK-VLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence 4689999988 9999999999999999 578888888776554 322 222333322222 223333333221 1246
Q ss_pred ccEEEEccCCHH-----------------------HHHHHHHHhccCCEEEEeccC
Q 022879 181 IDVSFDCAGLNK-----------------------TMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 181 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+|.++.+.|... .++..+..++++|+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 899999887421 133455566678899988754
No 153
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.66 E-value=0.0026 Score=51.02 Aligned_cols=82 Identities=28% Similarity=0.356 Sum_probs=57.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC--CEEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA--DNIVKVST-NLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 181 (290)
.++.++|+|| +++|.+.++.+...|+ +++.+.+..++++.+ .+++. -..+..+- ..++..+.+..+.+ .-+.+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence 4577899998 9999999999999999 688888998887755 56773 22222222 22344444544433 23569
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999886
No 154
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.61 E-value=0.00073 Score=52.52 Aligned_cols=84 Identities=21% Similarity=0.284 Sum_probs=60.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.|.+|||+|+ +++|+..++-...+|- .|+...+++++++.++....+ +....+-.+.+...++.+|....-...+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 5789999965 9999999998888998 688889999999888764322 112222233444445555555555679999
Q ss_pred EEccCCH
Q 022879 185 FDCAGLN 191 (290)
Q Consensus 185 id~~g~~ 191 (290)
+++.|..
T Consensus 83 iNNAGIq 89 (245)
T COG3967 83 INNAGIQ 89 (245)
T ss_pred eeccccc
Confidence 9999864
No 155
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.60 E-value=0.0016 Score=50.09 Aligned_cols=101 Identities=22% Similarity=0.284 Sum_probs=70.5
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...+++++++++=.|+|+ |..+++++...-..++++++++++..+.. ++||.+.+.......+ +.+.+
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap---~~L~~---- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP---EALPD---- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch---HhhcC----
Confidence 346789999777778866 77888888655555899999999988876 4588665444332222 22221
Q ss_pred hCCCccEEEEccCC--HHHHHHHHHHhccCCEEEEe
Q 022879 177 MGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 177 ~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~ 210 (290)
...+|.+|---|. ++.++.++..|+++|++|.-
T Consensus 100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 2258999865443 35788899999999999865
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.58 E-value=0.0015 Score=51.73 Aligned_cols=102 Identities=22% Similarity=0.362 Sum_probs=70.1
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcC-CCEEEecCCCcccHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIG-ADNIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
....+.+++++|..|+|+ |.+++++++.++. ..+++++.+++..+.++ .++ .+.+.... .+..+.+..
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-- 107 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-- 107 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh--
Confidence 446788999999999988 8899999987653 37999999998887654 355 23322211 122222221
Q ss_pred HHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879 175 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+|.||...+. ...+..+.+.|+++|+++..
T Consensus 108 --~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 --INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred --cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 23579999985543 34677788899999999853
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.0011 Score=55.47 Aligned_cols=82 Identities=18% Similarity=0.253 Sum_probs=55.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.++++||+|+ |++|...++.+...|+ .|+++++++++.+.+...+... +..+-. .+++...+++..+..++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~-~~~Dl~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEA-FQLDYAEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceE-EEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence 4678999988 9999999998888899 6888888888877666555432 222222 2233333444333234579999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 999763
No 158
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.44 E-value=0.0051 Score=50.97 Aligned_cols=114 Identities=22% Similarity=0.292 Sum_probs=70.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EE--ecCC-CcccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IV--KVST-NLQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~-~~~~~~~~~~~~~~~~ 177 (290)
.++.|+|+|| +++|.+.+.-.-..|++ ++.+.+..++++.+ ++++... ++ ..|- ..++..+.+. +....
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~-~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE-WAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH-HHHHh
Confidence 5788999999 99998888877788995 44444666655554 3444332 22 2222 2233333442 22234
Q ss_pred CCCccEEEEccCCHH-------------------------HHHHHHHHhccC--CEEEEeccCCCCccccch
Q 022879 178 GTGIDVSFDCAGLNK-------------------------TMSTALGATCAG--GKVCLVGMGHHEMTVPLT 222 (290)
Q Consensus 178 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~ 222 (290)
-+++|+.+++.|-.. ....++..|++. |+++.++...+...+|..
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 568999999988631 223366666543 999999876655555544
No 159
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.38 E-value=0.0034 Score=53.46 Aligned_cols=103 Identities=23% Similarity=0.286 Sum_probs=71.8
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHH
Q 022879 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKI 173 (290)
Q Consensus 99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.++...++++++||..|+|. |..++.+++..+. ..|++++.+++..+.++ ..|.+.+.... .+..+...
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~-- 145 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVP-- 145 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccc--
Confidence 44456788999999999974 9999999998764 25899999998766554 35654433221 22211111
Q ss_pred HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+|+|+.+.+.+......++.|+++|+++..
T Consensus 146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1246999999988766666788899999998763
No 160
>PRK12742 oxidoreductase; Provisional
Probab=97.32 E-value=0.0069 Score=49.20 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=47.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
+++++||+|+ |++|...++.+...|++ ++.+. +++++.+ +.+.++... +..+-. +. +.+.++.+. .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~--~~-~~~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATA-VQTDSA--DR-DAVIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeE-EecCCC--CH-HHHHHHHHH-hCCCcE
Confidence 4679999987 99999999999999995 55543 3444443 334455432 222222 21 123333222 246999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 79 li~~ag~ 85 (237)
T PRK12742 79 LVVNAGI 85 (237)
T ss_pred EEECCCC
Confidence 9999875
No 161
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.28 E-value=0.0037 Score=49.01 Aligned_cols=113 Identities=18% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCCCeEEEEC-C-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 106 GPETNVLIMG-A-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 106 ~~~~~vlI~G-a-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
.....|||+| + |++|.+...-....|+ .|+++.++-+..+-+. ++|.. .-+|. ..+++......+.+....++.
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCce
Confidence 3557899996 4 9999998888888899 7999988888777554 56622 22222 334455555556655456789
Q ss_pred cEEEEccCCHH----------H--------------HHHH--HHHhccCCEEEEeccCCCCcccc
Q 022879 182 DVSFDCAGLNK----------T--------------MSTA--LGATCAGGKVCLVGMGHHEMTVP 220 (290)
Q Consensus 182 d~vid~~g~~~----------~--------------~~~~--~~~l~~~G~~v~~g~~~~~~~~~ 220 (290)
|+.++..|.+= . +..+ -...+..|+++.+|....-.+++
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 99999887631 1 1112 22447789999998644333333
No 162
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.26 E-value=0.0011 Score=52.71 Aligned_cols=106 Identities=22% Similarity=0.266 Sum_probs=68.9
Q ss_pred HHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHH----HHcCCCEEEecCCC-cccHHH
Q 022879 95 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVA----KEIGADNIVKVSTN-LQDIAE 168 (290)
Q Consensus 95 ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~ 168 (290)
+-..+++...+++|++||-.|+|+ |+.++-+++..|.. .|++++..++-.+.+ +.++...+...... ...+
T Consensus 60 ~~a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~-- 136 (209)
T PF01135_consen 60 MVARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW-- 136 (209)
T ss_dssp HHHHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT--
T ss_pred HHHHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc--
Confidence 334456667799999999999876 88888888887754 588998888655444 44565433221111 1111
Q ss_pred HHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879 169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 169 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+||.|+-+.+.+..-...++.|+++|+++..
T Consensus 137 -------~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 137 -------PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -------GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred -------ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 12357999999888766667888999999999984
No 163
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.011 Score=53.16 Aligned_cols=81 Identities=25% Similarity=0.336 Sum_probs=49.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEEEecCCCccc-HHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 181 (290)
+++++||+|+ |++|...++.+...|+ .++.++.++ ++ .+..++++... +..+-.+.+ ..+.+....+ ...++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTA-LALDITAPDAPARIAEHLAE-RHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEeCCCHHHHHHHHHHHHH-hCCCC
Confidence 4789999988 9999999999999999 577776643 22 23334455432 222222222 2222233322 23479
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|++.|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999983
No 164
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.25 E-value=0.0085 Score=48.04 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=68.7
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHH
Q 022879 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI 173 (290)
Q Consensus 99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 173 (290)
+++...++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++ ++...+.....+.... +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------Y 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------C
Confidence 44556789999999998876 7777888887764 279999999888776644 4433221111111000 0
Q ss_pred HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+||+|+-............+.|+++|+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 12357999976655555667788899999998875
No 165
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.23 E-value=0.0057 Score=51.02 Aligned_cols=130 Identities=21% Similarity=0.285 Sum_probs=78.5
Q ss_pred CCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 022879 72 ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE- 150 (290)
Q Consensus 72 ~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~- 150 (290)
....+++.+++.|...... +...++.+++. .++++.++|=.|+|+ |.++|..++ +|+..+++++-++...+..++
T Consensus 129 ~~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eN 204 (300)
T COG2264 129 DELNIELDPGLAFGTGTHP-TTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAREN 204 (300)
T ss_pred CceEEEEccccccCCCCCh-hHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHH
Confidence 3556778888876544322 22223334443 356899999999866 666666554 488889999999877766654
Q ss_pred --cC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879 151 --IG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 151 --lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+. .... .. ...-.. .. ...+.+||+|+-++=.. ...+.....++|+|++++-|-.
T Consensus 205 a~~N~v~~~-~~-~~~~~~---~~---~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 205 ARLNGVELL-VQ-AKGFLL---LE---VPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL 265 (300)
T ss_pred HHHcCCchh-hh-cccccc---hh---hcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence 22 2210 00 000000 00 11235899999877532 2445677889999999998843
No 166
>PRK14967 putative methyltransferase; Provisional
Probab=97.22 E-value=0.01 Score=47.97 Aligned_cols=99 Identities=27% Similarity=0.335 Sum_probs=64.4
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK 175 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+....++++++||-.|+|. |..++.+++. +...+++++.+++..+.++. .+....+. ..++.+.+
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~----~~d~~~~~----- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR----RGDWARAV----- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE----ECchhhhc-----
Confidence 3344577889999999987 8888888875 55579999999988776543 33321111 12322211
Q ss_pred HhCCCccEEEEccCC---------------------------HHHHHHHHHHhccCCEEEEe
Q 022879 176 AMGTGIDVSFDCAGL---------------------------NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 176 ~~~~~~d~vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~ 210 (290)
....||+|+...+. ...+..+.+.|+++|+++.+
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 23579999875320 11345677889999998865
No 167
>PRK08017 oxidoreductase; Provisional
Probab=97.22 E-value=0.0046 Score=50.87 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=53.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEEEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid 186 (290)
+++||+|+ |.+|...++.+...|. .++++.+++++.+.++..+...+. .+-.+ +++.+.+.......+..+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGIL-LDLDDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEE-eecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999998999 588888888888777766654322 22211 22222233332222356899998
Q ss_pred ccCC
Q 022879 187 CAGL 190 (290)
Q Consensus 187 ~~g~ 190 (290)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8774
No 168
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.20 E-value=0.0013 Score=50.62 Aligned_cols=100 Identities=18% Similarity=0.262 Sum_probs=66.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe-cCCC--------------cccHHHHHH
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-VSTN--------------LQDIAEEVE 171 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~~~ 171 (290)
+..+|+|.|+|.+|+.|+++++.+|+ .++..+...++.+..+.++...+.. +... ...+...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 44789999999999999999999999 6888999999888888887655433 1111 233344444
Q ss_pred HHHHHhCCCccEEEEccCC-----HH-HHHHHHHHhccCCEEEEec
Q 022879 172 KIQKAMGTGIDVSFDCAGL-----NK-TMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 172 ~~~~~~~~~~d~vid~~g~-----~~-~~~~~~~~l~~~G~~v~~g 211 (290)
+.. ..+|++|.+.-. +. .....++.|+++..++.+.
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 332 247898864321 11 2345778889888888886
No 169
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.20 E-value=0.0033 Score=48.88 Aligned_cols=91 Identities=23% Similarity=0.215 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
-.|.+|.|.|.|.+|+..++.++.+|+ .|++.+++....+.....+... .++.+.++ ..|+|+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~--------~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA--------QADIVS 96 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH--------H-SEEE
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc--------hhhhhh
Confidence 368999999999999999999999999 7999988888766445555321 13333322 368998
Q ss_pred EccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879 186 DCAGLNK-----TMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 186 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~~ 213 (290)
.+....+ .-...++.++++..+|.++..
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSG
T ss_pred hhhccccccceeeeeeeeeccccceEEEeccch
Confidence 8776422 123567888888888888653
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.005 Score=51.36 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=53.2
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
+++||+|+ |++|...++.+...|+ .|+++++++++.+.+...+...+ .|. ...+++.+.++.+.+ ...++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence 47899988 9999999999988999 68888888877666655554322 222 122333333444332 2356999999
Q ss_pred ccCC
Q 022879 187 CAGL 190 (290)
Q Consensus 187 ~~g~ 190 (290)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9984
No 171
>PRK06182 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0063 Score=50.72 Aligned_cols=81 Identities=21% Similarity=0.219 Sum_probs=54.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
++++++|+|+ |.+|...++.+...|+ .|+++++++++.+.+...+... +..+- ..+++.+.+++..+ ...++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHP-LSLDVTDEASIKAAVDTIIA-EEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeE-EEeeCCCHHHHHHHHHHHHH-hcCCCCEE
Confidence 3578999988 9999999999888999 6888888887766554444332 22222 22334344444333 33579999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999984
No 172
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0066 Score=50.00 Aligned_cols=81 Identities=25% Similarity=0.336 Sum_probs=52.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 183 (290)
+++++||+|+ |.+|...++.+...|+ .++.+++++.+.+.. +.++.. .+..+-.+ +++.+.++++.+ ..+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAE-TYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4789999998 9999999999988999 577777877665433 445432 23222222 233333333322 2346999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
++++.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 173
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.15 E-value=0.017 Score=41.63 Aligned_cols=102 Identities=24% Similarity=0.315 Sum_probs=66.9
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
....+.+++++|-.|+|. |..+..+++..+...+++++.++...+.++. ++...+..... +....+..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence 334567788888899877 8889999998754579999999988776643 44322211111 11100111
Q ss_pred hCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879 177 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 177 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+|+|+-..+. ...++.+.+.|+++|.++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 12479999876543 23677899999999999864
No 174
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0072 Score=51.97 Aligned_cols=82 Identities=27% Similarity=0.366 Sum_probs=53.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +..+... ++..+-.+ ++..+.+++..+ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence 4679999998 9999999999999999 577888888776533 3345432 22222222 223333333322 235
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 175
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0088 Score=49.25 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=53.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-c---C-CCEEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-I---G-ADNIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |.+|..++..+...|+ .|+.+.+++++.+.+.. + + ...++..+- ..+++.+.+++..+ ..+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence 4789999987 9999999999998999 58888888777543322 2 2 122333222 22234343444332 235
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 176
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.024 Score=48.81 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +..+... .+..+-. .+++.+.++++.+ .-+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~-~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE-ELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH-HCC
Confidence 4678999988 9999999999888999 577777887765433 2334332 2222222 2223333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 177
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.07 E-value=0.013 Score=46.98 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=67.1
Q ss_pred HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHH
Q 022879 98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEK 172 (290)
Q Consensus 98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.++ .++.+.+..... +..+..
T Consensus 68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~-- 141 (215)
T TIGR00080 68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW-- 141 (215)
T ss_pred HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--
Confidence 344556788999999998866 6677778887653 25899999988777664 344332211111 111100
Q ss_pred HHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879 173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+||+|+-....+.......+.|+++|+++..
T Consensus 142 ---~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 ---EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ---cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 01347999886554445666788999999998864
No 178
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.029 Score=46.43 Aligned_cols=82 Identities=23% Similarity=0.283 Sum_probs=52.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 182 (290)
.++++||+|+ |++|...++.+...|+ .|+.+++++++.+ ..++++.. ..+..+- +.+++.+.+++..+. -..+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999987 9999999999888999 6888888876544 33445422 1222222 222333333333322 24699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999874
No 179
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.032 Score=45.59 Aligned_cols=82 Identities=16% Similarity=0.143 Sum_probs=50.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (290)
++.+++|+|+ |.+|...+..+...|+ .++.+++++++.+.. +. .+.. .++..+-.+. ++.+.+++..+ .-.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4688999988 9999999999888999 577777777654432 22 2322 2222222222 22222222222 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|+++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 180
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.02 E-value=0.03 Score=43.44 Aligned_cols=92 Identities=18% Similarity=0.256 Sum_probs=61.7
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879 111 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 189 (290)
Q Consensus 111 vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 189 (290)
|+|.|+ |.+|...++.+...|. .|.++.+++++.+. ..+.+ ++..+. .+. +.+.+.. .++|.||.++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence 689998 9999999999999997 68888899888776 33333 333332 222 2233221 37999999998
Q ss_pred C----HHHHHHHHHHhccCC--EEEEeccC
Q 022879 190 L----NKTMSTALGATCAGG--KVCLVGMG 213 (290)
Q Consensus 190 ~----~~~~~~~~~~l~~~G--~~v~~g~~ 213 (290)
. .......++.++..| +++.++..
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred hhcccccccccccccccccccccceeeecc
Confidence 4 234556666665443 77777643
No 181
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.02 E-value=0.0039 Score=52.35 Aligned_cols=135 Identities=19% Similarity=0.337 Sum_probs=75.8
Q ss_pred cceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879 64 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY 143 (290)
Q Consensus 64 ~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~ 143 (290)
|.+|-.-+...+..+.+++.|-..-.. +-..++.+++.. ..++++||=.|+|+ |.+++.-++ +|++.|++++-++.
T Consensus 120 w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~ 195 (295)
T PF06325_consen 120 WEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPL 195 (295)
T ss_dssp T----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCH
T ss_pred CcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHH
Confidence 444422244556778888777766433 112233344432 57888999888754 555554444 59989999999988
Q ss_pred HHHHHHH---c-CC-CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH---HHHHHHHHhccCCEEEEeccCC
Q 022879 144 RLSVAKE---I-GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 144 ~~~~~~~---l-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
..+.+++ + +. ..+... . ..+. ...+||+|+-+.-.+- ..+...+.++++|.++.-|...
T Consensus 196 Av~~a~~N~~~N~~~~~~~v~-~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 196 AVEAARENAELNGVEDRIEVS-L-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE 262 (295)
T ss_dssp HHHHHHHHHHHTT-TTCEEES-C-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHcCCCeeEEEE-E-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence 7666543 2 21 122111 1 1111 1257999998877532 3344566788999999988543
No 182
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.011 Score=48.88 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=51.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +. .+.. ..+..+-.++ +..+.+++..+ .-+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE-AFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4789999988 9999999999888999 678888887665433 22 2321 2222222222 23333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 183
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.01 Score=48.48 Aligned_cols=78 Identities=24% Similarity=0.359 Sum_probs=52.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
++.+++|+|+ |.+|...++.+...|. .|+.+++++++.+.+ +.++.. .+..+-.+.+ .+.+..+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVGDDA---AIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHH---HHHHHHHH-hCCCCEE
Confidence 4679999988 9999999999999999 588888887766544 334433 3322222221 23333222 3469999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999974
No 184
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.98 E-value=0.0076 Score=49.86 Aligned_cols=130 Identities=15% Similarity=0.243 Sum_probs=88.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC---------CCcccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS---------TNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~---------~~~~~~~~~~~~~~~~~ 177 (290)
++.++|+.|.|.+|+.++..++..|+ .|..-+....+.+-.+.+|+...-.-+ .-+++|.+.-.++....
T Consensus 163 ~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~~ 241 (356)
T COG3288 163 SPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAEQ 241 (356)
T ss_pred cchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHHH
Confidence 56788999999999999999999999 676666777776767767754322111 12345555555554456
Q ss_pred CCCccEEEEccCCH------HHHHHHHHHhccCCEEEEeccCC-CCc--cccchhhhccCcEEEEeeec
Q 022879 178 GTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY 237 (290)
Q Consensus 178 ~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~ 237 (290)
-+++|+||-+.-.| -....++..++|++.++.+.... +.. +-+-.-...+.++|+|..+.
T Consensus 242 ~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 242 AKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred hcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 67899999976432 13457889999999999987432 211 22223345678899998654
No 185
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.04 Score=45.04 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=59.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
+++++||+|+ |.+|...++.+...|. .|+.+.++. ++.+ .. +..+.. ..+..+-. .++..+.++++.+ ..
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE-EF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hC
Confidence 4678999988 9999999998888899 466665643 2222 22 222322 12222222 2233333333322 22
Q ss_pred CCccEEEEccCCH-------------------HHHHHHHHHhccCCEEEEecc
Q 022879 179 TGIDVSFDCAGLN-------------------KTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 179 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 212 (290)
.++|+++.+.|.. ..++.+...+...|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4699999888642 123334444555688888864
No 186
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.014 Score=48.57 Aligned_cols=81 Identities=28% Similarity=0.297 Sum_probs=52.4
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v 184 (290)
+.++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +.++....+..+-. .+++.+.++++.+. -.++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 578999988 9999999998888899 577777887776543 44542222322222 23333334444332 2579999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 187
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.93 E-value=0.023 Score=44.56 Aligned_cols=101 Identities=20% Similarity=0.283 Sum_probs=60.2
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
..++++++||..|+|+-+ .+..+++.. +...+++++.+++. +..+.. ++..+..+....+.+.+. ....++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~--~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRER--VGDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHH--hCCCCc
Confidence 567899999999987744 344444443 43469999998764 112332 222222222222222222 235579
Q ss_pred cEEEEcc-----CC------------HHHHHHHHHHhccCCEEEEec
Q 022879 182 DVSFDCA-----GL------------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 182 d~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 211 (290)
|+|+... |. ...+..+.+.|+++|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999531 21 246777899999999998754
No 188
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.93 E-value=0.016 Score=48.02 Aligned_cols=82 Identities=22% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 182 (290)
+++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. .++.. ..+..+- +.++..+.+++..+. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 4679999987 9999999999888999 5788888877765543 34421 2222222 222333444444332 34699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999884
No 189
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.011 Score=47.73 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=50.7
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid 186 (290)
++++|+|+ |++|...++.+...|+ .|+.+++++++.+.++.++....+..+-.+. ++.+.++++ .+.++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 47899987 9999999988888899 6888888877666555554333333222222 222222222 2347999999
Q ss_pred ccCC
Q 022879 187 CAGL 190 (290)
Q Consensus 187 ~~g~ 190 (290)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8864
No 190
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.018 Score=48.59 Aligned_cols=82 Identities=23% Similarity=0.283 Sum_probs=51.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +. .+.. ..+..+-.+ +++.+.++++.+ .-+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK-RIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4578999987 9999999998888899 688888887765433 22 2322 222222222 233333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 191
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.018 Score=48.75 Aligned_cols=81 Identities=31% Similarity=0.459 Sum_probs=53.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EE----EecCCCcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
+++++||+|+ |++|..+++.+...|+ .|+.+++++++.+. .+.++.. .+ .|. .+.++..+.++++.+. .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence 5789999988 9999999999999999 58888888776553 3455421 11 222 1222333334443322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 192
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.017 Score=47.46 Aligned_cols=82 Identities=22% Similarity=0.256 Sum_probs=52.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~d 182 (290)
++.++||+|+ |.+|...++.+...|+ .|+.++++++..+...++.... .+..+-. .+++.+.+.++.+. ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999988 9999999998888999 5888888776655555443221 2222222 22233333333222 24699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999975
No 193
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.86 E-value=0.0066 Score=43.00 Aligned_cols=93 Identities=29% Similarity=0.372 Sum_probs=62.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHH-c---C-CCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKE-I---G-ADNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~-l---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
|+.+||-.|+|. |..++.+++. .++ .+++++.+++..+.+++ . + .+.+.... .++ ... .....+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~----~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFD----PDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGG----TTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccC----cccCCC
Confidence 678999998876 7788888884 677 79999999998887754 2 2 12221111 222 111 123457
Q ss_pred ccEEEEcc-CC---HH------HHHHHHHHhccCCEEEE
Q 022879 181 IDVSFDCA-GL---NK------TMSTALGATCAGGKVCL 209 (290)
Q Consensus 181 ~d~vid~~-g~---~~------~~~~~~~~l~~~G~~v~ 209 (290)
||+|+... .. .. .+..+.+.|+|+|+++.
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999877 21 12 37788899999999875
No 194
>PRK06484 short chain dehydrogenase; Validated
Probab=96.85 E-value=0.043 Score=50.33 Aligned_cols=105 Identities=22% Similarity=0.252 Sum_probs=66.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
.++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. .++... .+..+-.+ ++..+.+++..+ .-+.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA-RWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 5788999987 9999999998888999 6888888877766543 354322 22222222 233333443332 234699
Q ss_pred EEEEccCCHH--------------------------HHHHHHHHhccCCEEEEeccC
Q 022879 183 VSFDCAGLNK--------------------------TMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 183 ~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 213 (290)
++|++.|... ..+.++..++.+|+++.++..
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 9999987420 122244555567899988753
No 195
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.84 E-value=0.02 Score=49.73 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=63.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.+|||.|+|.+|+.+++.+...|-..|...+++.++.+.+.... .-..+..+.. + .+.+.++. +++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~--d-~~al~~li----~~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA--D-VDALVALI----KDFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc--C-hHHHHHHH----hcCCEEEE
Confidence 47899999999999999988888447999999988888776653 1122222221 1 12333332 34699999
Q ss_pred ccCCHHHHHHHH-HHhccCCEEEEeccCC
Q 022879 187 CAGLNKTMSTAL-GATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~~~~~~-~~l~~~G~~v~~g~~~ 214 (290)
+.+..-.. .++ .+++.+=.++......
T Consensus 75 ~~p~~~~~-~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDL-TILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred eCCchhhH-HHHHHHHHhCCCEEEcccCC
Confidence 99974333 444 4555555666665433
No 196
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.024 Score=46.42 Aligned_cols=82 Identities=16% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
+++++||+|+ |++|..+++.+...|+ .++.+++++++.+.. +..+.. ..+..+-.+ +++.+.++++.+ ...
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAE-DFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 4679999988 9999999999998999 578888887654432 223432 222222222 233333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (253)
T PRK08217 82 QLNGLINNAGI 92 (253)
T ss_pred CCCEEEECCCc
Confidence 68999999873
No 197
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.017 Score=47.54 Aligned_cols=81 Identities=25% Similarity=0.256 Sum_probs=51.2
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCC-CEEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
++++||+|+ +++|...++.+...|+ .|+++++++++.+.+. ..+. ...+..+-. .+++.+.+.++.+. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence 468999987 9999999999999999 6888888776554332 2221 122322222 22333334443332 246
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 9999999874
No 198
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.84 E-value=0.024 Score=46.39 Aligned_cols=82 Identities=18% Similarity=0.194 Sum_probs=50.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 181 (290)
.++++||+|+ |++|...++.+...|+ .|+.+++++. ..+.++.++.. ..+..+-. .+++...+++..+ ...++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE-EFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-HcCCC
Confidence 4789999988 9999999998888999 5777766542 22333444432 22222222 2233333333322 23469
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 199
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.81 E-value=0.011 Score=45.13 Aligned_cols=81 Identities=22% Similarity=0.297 Sum_probs=50.8
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC--hhHHH-HHHH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLS-VAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~-~~~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
+++||+|+ +++|...++.+-..|..+++.+.++ .++.+ +.++ .+.. .++..+- ..++..+.++++. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI-KRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH-HHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 47899987 9999998887777777788888888 33333 3333 3421 2222222 2233444444443 2346
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999999886
No 200
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.017 Score=46.81 Aligned_cols=81 Identities=22% Similarity=0.263 Sum_probs=49.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
+++++||+|+ |.+|..+++.+...|+ .|+.+++++++.. .++. .+.. .+..+- ..+++.+.+++..+.. .+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~-~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQF-GR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHh-CC
Confidence 3689999988 9999999998888899 5888878665432 2222 2322 222221 1223333333333222 47
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 201
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.022 Score=47.61 Aligned_cols=82 Identities=22% Similarity=0.132 Sum_probs=52.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
.++++||+|+ |.+|.+.++.+...|. .|+++++++++.+.+...... ..+..+-.+ ++..+.+++..+ .-.++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEA-TFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHH-HhCCCC
Confidence 3578999988 9999999998888899 588888888776655443211 122222222 223333333322 224699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 202
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.79 E-value=0.022 Score=50.40 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=53.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.+.++||.|+|.+|.+++..+...|+..++++.++.++.+ +++.++...++. + +.+.+. -..+|+||
T Consensus 180 ~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~----l~~aDiVI 247 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQL----IKKADIII 247 (414)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHH----hccCCEEE
Confidence 5789999999999999999999999888888888877654 445565222222 1 122221 14589999
Q ss_pred EccCCHHH
Q 022879 186 DCAGLNKT 193 (290)
Q Consensus 186 d~~g~~~~ 193 (290)
+|++.+..
T Consensus 248 ~aT~a~~~ 255 (414)
T PRK13940 248 AAVNVLEY 255 (414)
T ss_pred ECcCCCCe
Confidence 99998643
No 203
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.022 Score=46.54 Aligned_cols=82 Identities=24% Similarity=0.299 Sum_probs=51.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
++.++||+|+ |.+|...++.+...|+ .++.+++++++.+ ..++++... .+..+-.+ ++..+.++.+.+ ...++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence 4679999988 9999999999999999 5788877766544 334455332 22222111 222222233322 235799
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 204
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.016 Score=47.90 Aligned_cols=83 Identities=20% Similarity=0.256 Sum_probs=52.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (290)
-++.++||+|+ |.+|...++.+...|. .|+.+.++++..+.+. .+... ..+..+-.+ +++.+.+++..+. -.+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence 46789999988 9999999999999999 5888878776555433 33322 222222222 2233333333222 247
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|.||++.|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 205
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.79 E-value=0.034 Score=44.99 Aligned_cols=104 Identities=26% Similarity=0.383 Sum_probs=71.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHH
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
+...++.+|++|+=.|.|+ |.+++.|+++.|. ..++..+..++..+.++ .++....+.+ ...|..+..
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~---- 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI---- 159 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc----
Confidence 3457899999999988877 8899999998877 47899988888777664 3443332221 112222211
Q ss_pred HHhCCCccEEE-EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879 175 KAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 175 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
.+..+|.+| |.-..-+.+..+.+.|+++|.++.+.+
T Consensus 160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 234788875 444444678889999999999998864
No 206
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.78 E-value=0.019 Score=50.30 Aligned_cols=99 Identities=23% Similarity=0.277 Sum_probs=68.4
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
+...++++++||-.|+|. |..+..+++..|+ .|++++.+++..+.+++......+.+. ..++ .++ .+.
T Consensus 161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~----~~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDY----RDL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECch----hhc----CCC
Confidence 446789999999998864 7788888888888 699999999999988764322111111 1122 111 346
Q ss_pred ccEEEEc-----cCC---HHHHHHHHHHhccCCEEEEec
Q 022879 181 IDVSFDC-----AGL---NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 181 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 211 (290)
||.|+.. +|. +..+..+.+.|+|+|.++...
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998643 343 245777888999999998754
No 207
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.021 Score=47.17 Aligned_cols=82 Identities=17% Similarity=0.260 Sum_probs=49.9
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.++++||+|++ ++|.+.++.+...|+ .|+.++++++.. +..++++....+..+-. .++..+.+++..+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 46899999873 899999998888999 466666665432 22233443333333322 223333333333322
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+.+|+++++.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 469999999874
No 208
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.78 E-value=0.031 Score=46.33 Aligned_cols=103 Identities=21% Similarity=0.357 Sum_probs=70.5
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK 175 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+++.++++|.++|=.|+|- |.+++-.|+..|+ .|++++-|++..+.+++ .|...-+. -...++.+ +
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~--v~l~d~rd----~-- 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVE--VRLQDYRD----F-- 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccE--EEeccccc----c--
Confidence 4568999999999999876 7788899999999 69999999998887754 44331111 01112211 1
Q ss_pred HhCCCccEEE-----EccCC---HHHHHHHHHHhccCCEEEEeccCC
Q 022879 176 AMGTGIDVSF-----DCAGL---NKTMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 176 ~~~~~~d~vi-----d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
...||-|+ +.+|. +.-+..+.+.|+++|++.+.....
T Consensus 135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 22377774 35554 245667888999999998876443
No 209
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.02 Score=47.72 Aligned_cols=82 Identities=18% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
+++++||+|+ + ++|.+.++.+...|+ .|+.+.++++..+ ..++++....+..|-. .++..+.+++..+. -
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence 4678999988 4 899999998888999 5666666543222 2233453333332222 22333334443322 2
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 210
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.77 E-value=0.044 Score=43.66 Aligned_cols=101 Identities=17% Similarity=0.202 Sum_probs=66.5
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCC---EEEecCCCcccHHHHH
Q 022879 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGAD---NIVKVSTNLQDIAEEV 170 (290)
Q Consensus 99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~---~~~~~~~~~~~~~~~~ 170 (290)
+++...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.++ ..+.. .++.- +..+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-----d~~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-----DGKRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-----CcccCC
Confidence 34556778899999998866 777777887764 237999999988766554 34432 22221 111101
Q ss_pred HHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 171 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
.....||.|+-+.........+.+.|+++|+++..
T Consensus 138 -----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 138 -----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred -----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 01247999987766545556788999999999764
No 211
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.021 Score=46.94 Aligned_cols=82 Identities=27% Similarity=0.330 Sum_probs=51.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +.+ +.. ..+..+- ..++..+.++++.+.. +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 4789999988 9999999999989999 577777877665433 222 321 1222222 2223333344433222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 212
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.76 E-value=0.041 Score=50.33 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=36.5
Q ss_pred cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 022879 103 ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 147 (290)
Q Consensus 103 ~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 147 (290)
.+.+.|+++||.|+ |.+|..+++.+...|+ .|+++.++.++.+.
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 56678999999998 9999999999888899 57777788776543
No 213
>PRK06196 oxidoreductase; Provisional
Probab=96.75 E-value=0.017 Score=49.30 Aligned_cols=82 Identities=20% Similarity=0.284 Sum_probs=51.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 183 (290)
.+.++||+|+ |++|..++..+...|+ .|+.+++++++.+. .+.+..-..+..+-. .++..+.+.++.+ ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence 4679999988 9999999998888899 57777787766543 333332223322222 2223333333322 2357999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999874
No 214
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.027 Score=46.60 Aligned_cols=84 Identities=27% Similarity=0.360 Sum_probs=52.2
Q ss_pred CCCCCeEEEECC-C-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----H-cCCCEE--EecCCCcc-cHHHHHHHHH
Q 022879 105 IGPETNVLIMGA-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----E-IGADNI--VKVSTNLQ-DIAEEVEKIQ 174 (290)
Q Consensus 105 ~~~~~~vlI~Ga-g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~-lg~~~~--~~~~~~~~-~~~~~~~~~~ 174 (290)
+..++++||+|+ | ++|.+.++.+...|+ .|+.+++++++.+... . ++...+ +..+-.+. +....+++..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345789999987 6 799999999999999 5777777776554332 1 343222 22222222 2333333332
Q ss_pred HHhCCCccEEEEccCC
Q 022879 175 KAMGTGIDVSFDCAGL 190 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~ 190 (290)
+ ..+++|++|++.|.
T Consensus 93 ~-~~g~id~li~~ag~ 107 (262)
T PRK07831 93 E-RLGRLDVLVNNAGL 107 (262)
T ss_pred H-HcCCCCEEEECCCC
Confidence 2 22479999999984
No 215
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.74 E-value=0.0045 Score=51.55 Aligned_cols=99 Identities=23% Similarity=0.383 Sum_probs=59.5
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK 175 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
++++++++|++||-.|+|- |..++.+++..|+ .|++++.+++..+++++ .|....+.+. ..++. ++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~--~~D~~----~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVR--LQDYR----DL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEE--ES-GG----G---
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEE--Eeecc----cc--
Confidence 4558899999999999874 6678888888899 69999999998887753 4522111110 11221 11
Q ss_pred HhCCCccEEEE-----ccCC---HHHHHHHHHHhccCCEEEEe
Q 022879 176 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 176 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~ 210 (290)
...||.|+. .+|. +..+..+.+.|+|+|+++.-
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 237999855 4443 24577888999999999754
No 216
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.73 E-value=0.02 Score=45.98 Aligned_cols=98 Identities=24% Similarity=0.273 Sum_probs=64.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
-+|.+||=.|+|+ |+++..+|+. |+ .|.+++-+++..+.++.-....-+..+.. .. .++++.. .++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~-~~---~~edl~~-~~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYR-QA---TVEDLAS-AGGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccch-hh---hHHHHHh-cCCCccEEE
Confidence 4788999988855 5666666554 78 79999999999999875432222221111 11 2344432 347899997
Q ss_pred E-----ccCCH-HHHHHHHHHhccCCEEEEec
Q 022879 186 D-----CAGLN-KTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 186 d-----~~g~~-~~~~~~~~~l~~~G~~v~~g 211 (290)
. .+..+ ..+..+.+.++|+|.++.--
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 5 34433 35667999999999887653
No 217
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.69 E-value=0.028 Score=46.51 Aligned_cols=81 Identities=26% Similarity=0.235 Sum_probs=51.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 182 (290)
++++++|+|+ |++|...++.+...|+ .|+.+++++++.+.+.. .+.. ..+..+- ..++..+.++++.+. -+.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 4689999988 9999999998888999 57788887776655543 3321 1222121 122333334443322 24689
Q ss_pred EEEEccC
Q 022879 183 VSFDCAG 189 (290)
Q Consensus 183 ~vid~~g 189 (290)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
No 218
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.027 Score=46.03 Aligned_cols=82 Identities=22% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--C-CEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG--A-DNIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
++.++||+|+ |.+|...++.+...|. .|+.+++++++.+.+ +.+. . ...+..+- ..+++...+++... ...+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALE-RFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence 4578999988 9999999998888899 488888887665443 3332 1 11222222 22233333333322 2346
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 219
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.025 Score=46.85 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=51.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEE--EecCCCc-ccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNI--VKVSTNL-QDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~--~~~~~~~-~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.. +++ +...+ +..+-.+ ++..+.++++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR- 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4679999988 9999999999999999 577888887665432 222 11122 2222222 2333333333222
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 3469999999984
No 220
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.026 Score=47.07 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=66.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE-
Q 022879 109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD- 186 (290)
Q Consensus 109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid- 186 (290)
++|||.|+|. |..+=++++....+++++++-+++=.++.+++ +....-..+.+-+=......++.+....+||+||-
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 6999997655 55777888988888999999999988888773 32110000111111112233333334458999854
Q ss_pred ccCC---------HHHHHHHHHHhccCCEEEEe
Q 022879 187 CAGL---------NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 187 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 210 (290)
+... .+..+.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 4332 34677899999999999887
No 221
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.011 Score=49.06 Aligned_cols=97 Identities=18% Similarity=0.263 Sum_probs=70.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
+..+|.|.|+|.+|.-++.+|.-+|+ .|...+.+..|+..++.+-..++..+.+...++.+.+ .+.|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence 44577888999999999999999999 5888999999998887755444433333333333322 45899998
Q ss_pred ccCCH------HHHHHHHHHhccCCEEEEecc
Q 022879 187 CAGLN------KTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 187 ~~g~~------~~~~~~~~~l~~~G~~v~~g~ 212 (290)
++-.+ -...+.++.|+|++.++.+.-
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 76332 246678999999999998763
No 222
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.1 Score=43.36 Aligned_cols=79 Identities=24% Similarity=0.357 Sum_probs=48.1
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE--EEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~ 181 (290)
+++|+|+ |++|..+++.+...|+ .|+.+++++++.+.. +..+... .+..+-. .++..+...++.+ ...++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA-AHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH-hcCCC
Confidence 6899987 9999999998888999 577777776654332 2233321 1111211 2223333333322 23569
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999974
No 223
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.67 E-value=0.042 Score=41.55 Aligned_cols=95 Identities=19% Similarity=0.257 Sum_probs=61.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
..-.|++++|.|=|.+|.-.++.++.+|+ +|++++.++.+.-.+..-|.. +. + +.+. -...|+
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~----~~~a----~~~adi 81 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------T----LEEA----LRDADI 81 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE------------HHHH----TTT-SE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------C----HHHH----HhhCCE
Confidence 35688999999999999999999999999 699999999776655555543 21 1 2221 235799
Q ss_pred EEEccCCHHH-HHHHHHHhccCCEEEEeccCCC
Q 022879 184 SFDCAGLNKT-MSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 184 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
+|.++|.... -..-++.|+++..+...|....
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 9999997553 3467788887777777775443
No 224
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.67 E-value=0.053 Score=43.10 Aligned_cols=35 Identities=43% Similarity=0.563 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|..+++.+...|...+..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999888888766
No 225
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.67 E-value=0.097 Score=41.67 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.|.+|||.|+|.+|..-++.+...|+ .|.+++.... ....+.+.+.-..+. . ++.. .. -.++++||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~---~--~~~~--~d-----l~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA---R--CFDA--DI-----LEGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe---C--CCCH--HH-----hCCcEEEE
Confidence 46799999999999999999999999 5777655432 222222333211221 1 1111 11 14689999
Q ss_pred EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879 186 DCAGLNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 186 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
-+++.++.-.......+..|..+..-.
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 999986555566666777788776543
No 226
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.032 Score=45.65 Aligned_cols=82 Identities=24% Similarity=0.321 Sum_probs=50.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |.+|...++.+...|+ .++.+++++++.+.+ +.+ +.. ..+..+-.+ +++.+..+++.+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4678999988 9999999998888898 588888876654322 222 211 222222222 22333333333222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 227
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.64 E-value=0.033 Score=45.83 Aligned_cols=82 Identities=17% Similarity=0.280 Sum_probs=50.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ + ..+.. ..+..+-. .+++.+.+++..+ .-.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence 4689999987 9999999998888899 577787877654322 2 22321 12222222 2233333333322 235
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999975
No 228
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.029 Score=46.44 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=48.5
Q ss_pred CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.++++||+|+ + ++|.+.++.+...|+ .|+.+.++++..+.+ ++++....+..|-. .++..+.+++..+..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~- 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW- 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5678999987 4 799999888888899 466666664322222 23343333222222 233333444433322
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 469999998873
No 229
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.034 Score=45.70 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=51.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ +++|...++.+...|+ .++.+++++++.+.+ + ..+.. ..+..+-.+ ++..+.++++.+. -+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 4678999987 9999999998888999 577777877665533 2 22322 222222222 2233333333322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
.+|++|++.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 230
>PRK08589 short chain dehydrogenase; Validated
Probab=96.62 E-value=0.032 Score=46.49 Aligned_cols=82 Identities=24% Similarity=0.381 Sum_probs=50.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
.++++||+|+ +++|.+.++.+...|+ .|+.++++++..+..+++ +.. ..+..+- ..++..+.++++.+.. ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 4679999988 9999999998888899 577777774433334333 321 2222222 2223333344443322 46
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 9999999874
No 231
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.031 Score=46.10 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=51.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+++++|+|+ |++|...++.+...|++.|+.+++++++.. .++..+... .+..+-.+ +++.+.++...+.. +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 5678999988 999999999999999964788877765544 222334321 12222222 22333333332222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 232
>PRK06128 oxidoreductase; Provisional
Probab=96.62 E-value=0.095 Score=44.36 Aligned_cols=82 Identities=23% Similarity=0.234 Sum_probs=47.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--H----HHHHHHcCCCE-EEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--R----LSVAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~----~~~~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ |++|.+.++.+...|++ |+.+..+.+ . .+.++..+... .+..+-. .++..+.+++..+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE- 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence 4679999987 99999999988889995 555544322 1 12233334322 2222222 22333333333322
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|++|++.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2469999999874
No 233
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.035 Score=44.94 Aligned_cols=82 Identities=16% Similarity=0.221 Sum_probs=52.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
.+++++|.|+ +++|.+.+..+...|+ .|+.+.+++++.+.+ ++.+... .+..+- ..++..+.+++..+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999988 9999999988888899 577777877765432 2334321 222222 223333334444333343
Q ss_pred CccEEEEccC
Q 022879 180 GIDVSFDCAG 189 (290)
Q Consensus 180 ~~d~vid~~g 189 (290)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 234
>PRK07574 formate dehydrogenase; Provisional
Probab=96.59 E-value=0.055 Score=47.34 Aligned_cols=92 Identities=21% Similarity=0.258 Sum_probs=63.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|.+|.|.|.|.+|+..++.++.+|+ .|.+.+++....+..+.++... + .+ ++++. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence 56789999999999999999999999 6888887764444444555321 1 12 22222 34799988
Q ss_pred ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKTM-----STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 214 (290)
+....... ...+..|+++..+|.++...
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 87754322 24677889999999887654
No 235
>PRK06194 hypothetical protein; Provisional
Probab=96.58 E-value=0.04 Score=46.19 Aligned_cols=82 Identities=23% Similarity=0.325 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.. +++ +.. ..+..+-.+ +++.+.++.+.+ ...
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 3578999987 9999999998888899 577787776554322 222 322 122222222 223333333322 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999885
No 236
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.58 E-value=0.035 Score=47.49 Aligned_cols=81 Identities=22% Similarity=0.363 Sum_probs=50.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC---CC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG---AD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg---~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
++.+++|+|+ |++|...++.+...|+ .|+.+++++++.+. .+++. .. ..+..+- +.++..+.++++. ....
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR-ALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH-HhCC
Confidence 4678999987 9999999998888898 57778787766543 33332 11 1222221 1222333333332 2345
Q ss_pred CccEEEEccC
Q 022879 180 GIDVSFDCAG 189 (290)
Q Consensus 180 ~~d~vid~~g 189 (290)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 237
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.039 Score=45.62 Aligned_cols=81 Identities=25% Similarity=0.344 Sum_probs=50.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc--C-CCEEEecCCCcc-cHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI--G-ADNIVKVSTNLQ-DIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 180 (290)
++.++||+|+ |.+|...++.+...|+ .|+++++++++.+.+. ++ + ....+..+-.+. +..+..+.+.+ .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999987 9999999998888999 5888888877655442 22 2 112222222222 22222222221 357
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|.++++.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 238
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.57 E-value=0.046 Score=44.32 Aligned_cols=106 Identities=25% Similarity=0.396 Sum_probs=74.7
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
....+|++||=.|+|. |-.++.+++..|...+++++-++..++.+++ .+... +.+-.. + .+++ .-.+
T Consensus 47 ~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~L-Pf~D 117 (238)
T COG2226 47 LGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENL-PFPD 117 (238)
T ss_pred hCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhC-CCCC
Confidence 4556899999987765 8899999999986689999999999887765 22221 111110 1 1111 1245
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCCCCc
Q 022879 179 TGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHEM 217 (290)
Q Consensus 179 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~ 217 (290)
+.||++.-+.|- +..+.++.+.|+|+|+++.+.......
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~ 162 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN 162 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence 679999776665 357899999999999999887665443
No 239
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.042 Score=45.53 Aligned_cols=81 Identities=20% Similarity=0.238 Sum_probs=50.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
+++++||+|+ |++|...++.+...|+ .|+.+++++++.+.. +. .+.. ..+..+-. .+++.+.+++.... .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 5789999988 9999999998888999 588887776654322 22 2222 22222222 22333334443322 24
Q ss_pred CccEEEEccC
Q 022879 180 GIDVSFDCAG 189 (290)
Q Consensus 180 ~~d~vid~~g 189 (290)
++|++|++.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6999999876
No 240
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.56 E-value=0.032 Score=46.03 Aligned_cols=82 Identities=28% Similarity=0.319 Sum_probs=50.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCCE-EEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
+++++||+|+ |.+|.+.++.+...|+ .|+.+++++...+..+++ +... .+..+- ..++..+.++++.+. -++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999988 9999999998888999 577777775433333333 3221 122221 122333344443322 346
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++++++|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999873
No 241
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.56 E-value=0.038 Score=45.46 Aligned_cols=81 Identities=22% Similarity=0.255 Sum_probs=48.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
.+.+++|+|+ |++|...++.+...|++ ++.+ .++++..+.++..+.. .+..+- ..++..+.++++.+ .-+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEK-EFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4678999987 99999999988888995 5554 3444444444433322 222222 22333334444332 2346999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999875
No 242
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.54 E-value=0.044 Score=45.25 Aligned_cols=79 Identities=30% Similarity=0.318 Sum_probs=49.5
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCEEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++ .+....+..+- +.++..+.+++..+ .-+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~-~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWE-LLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCE
Confidence 6899987 9999999998888899 578888877664432 22 23222333322 22233333333332 2347999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999874
No 243
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.043 Score=45.86 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=63.8
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (290)
.++++||+|+ +++|.+.++.+...|+ .|+.+.++++ +.+ ..++++....+..+-.+ ++..+.++++.+. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4689999986 4899999998888999 5777767642 222 22445533333332222 2333344443332 3
Q ss_pred CCccEEEEccCCH--------------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879 179 TGIDVSFDCAGLN--------------K---------------TMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 179 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+++|+++++.|.. + ..+..+..+..+|+++.++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 5799999999841 1 122355566677999988753
No 244
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.042 Score=45.38 Aligned_cols=82 Identities=22% Similarity=0.315 Sum_probs=50.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (290)
.+.++||+|+ |.+|...++.+...|+ .|+.++++++..+..+++ +.. ..+..+-.+ ++..+.+.++.+ .-.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE-KEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence 4678999987 9999999998888999 588887776544443332 322 122222222 223333333322 2356
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 245
>PRK08643 acetoin reductase; Validated
Probab=96.53 E-value=0.041 Score=45.22 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=50.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ .. .+.. ..+..+-. .++..+.++++.+ .-++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD-TFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence 568999987 9999999999888999 588887877654433 22 2222 12222221 2233333333332 2356
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 246
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.52 E-value=0.048 Score=46.43 Aligned_cols=91 Identities=26% Similarity=0.302 Sum_probs=60.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 109 TNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 109 ~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
.+|.|.|+|.+|.+.+..++..|. ..|++.++++++.+.+++.|...... .+..+. -...|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEEC
Confidence 579999999999999998888885 36888899998888888777432111 111111 1358999999
Q ss_pred cCCHHH---HHHHHHHhccCCEEEEecc
Q 022879 188 AGLNKT---MSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 188 ~g~~~~---~~~~~~~l~~~G~~v~~g~ 212 (290)
+..... +......++++..++.++.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 986322 2233344566666666654
No 247
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.52 E-value=0.045 Score=45.12 Aligned_cols=82 Identities=23% Similarity=0.272 Sum_probs=51.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+... ..+.. ..+..+-. .+++.+.+.++.+. ..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 4689999987 9999999998888999 5788878776654432 22221 12222222 22333333333322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 248
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.52 E-value=0.095 Score=43.28 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=47.1
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCC--EEEecCC-CcccHHHHHHHHHHH
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGAD--NIVKVST-NLQDIAEEVEKIQKA 176 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~--~~~~~~~-~~~~~~~~~~~~~~~ 176 (290)
.+++++|+|+ +++|.+.++.+...|+ .|+.+.++. ++.+ ..+++... ..+..|- +.++..+.++++.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4688999986 5999999988888899 466664432 2333 33334211 1222222 223333344443322
Q ss_pred hCCCccEEEEccC
Q 022879 177 MGTGIDVSFDCAG 189 (290)
Q Consensus 177 ~~~~~d~vid~~g 189 (290)
. +++|+++++.|
T Consensus 85 ~-g~ld~lv~nag 96 (257)
T PRK08594 85 V-GVIHGVAHCIA 96 (257)
T ss_pred C-CCccEEEECcc
Confidence 2 46999999886
No 249
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.037 Score=45.57 Aligned_cols=82 Identities=23% Similarity=0.212 Sum_probs=51.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
++.++||+|+ |.+|...++.+...|++ ++.+++++++.+..+.+ +.. ..+..+-. .+++...++++... ..+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 4679999988 99999999888888995 66676777665444332 322 22222222 22233333333322 247
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 250
>PRK00811 spermidine synthase; Provisional
Probab=96.52 E-value=0.022 Score=47.86 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=64.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEecCCCcccHHHHHHHHHHH
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...+++||+.|+|. |..+..+++..+...+++++-+++-.+.+++. .. +.-+.+ ...|..+.+ ..
T Consensus 74 ~~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v--~~~Da~~~l----~~ 146 (283)
T PRK00811 74 HPNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVEL--VIGDGIKFV----AE 146 (283)
T ss_pred CCCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEE--EECchHHHH----hh
Confidence 35678999998866 66777888877777899999999988888763 10 110110 012222222 22
Q ss_pred hCCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879 177 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 177 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 211 (290)
..+.+|+||-.... .+.+..+.+.|+++|.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 35679999864321 234567788999999998753
No 251
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.046 Score=46.66 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=49.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CC-C-EEEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----GA-D-NIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~-~-~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.+++++|+|+ +++|.+.++.+...|+ .|+.+.+++++.+. ++++ +. . ..+..+-. .++..+..+++.+ .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence 4689999988 9999999998888899 57777787765432 2222 11 1 12222221 2223233333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
..++|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 3579999998874
No 252
>PRK05717 oxidoreductase; Validated
Probab=96.51 E-value=0.046 Score=44.96 Aligned_cols=82 Identities=26% Similarity=0.278 Sum_probs=51.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
.++++||+|+ |.+|...+..+...|+ .|+.++++.++.+ ..+.++.. ..+..+-.+ .+..+.++++.+.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4678999987 9999999998888899 5777766655433 33445422 222222222 22333334433222 4699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 253
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.51 E-value=0.1 Score=41.16 Aligned_cols=103 Identities=14% Similarity=0.288 Sum_probs=61.5
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
....++++++||=.|+|. |..++.+++......+++++.+++..+.+++ ++...+.... .+..+.+..+
T Consensus 34 ~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~--- 106 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL--- 106 (196)
T ss_pred HhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC---
Confidence 445677888888887654 5566666665433479999999988776643 4543222111 1221212111
Q ss_pred hCCCccE-EEEccCC-HHHHHHHHHHhccCCEEEEec
Q 022879 177 MGTGIDV-SFDCAGL-NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 177 ~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g 211 (290)
...+|. .++.... ...+..+.+.|+++|+++...
T Consensus 107 -~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 -APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred -CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 122344 4443222 356788899999999998774
No 254
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.044 Score=45.42 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=51.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc----CCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
+++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. ++ +.. ..+..+-. .++..+.+++.. .-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~--~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK--NI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH--hh
Confidence 4778999988 9999999999999999 5777888876654332 22 221 22222222 223333333332 22
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 469999999875
No 255
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.15 Score=41.54 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=47.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
++.++||+|+ |.+|...++.+...|++ ++.+.+ ++++.+ .. +..+.. ..+..+-. .+++.+.++++.+. -
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 5678999987 99999999999999995 544433 332222 22 223321 22222221 22333333433322 2
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 469999999884
No 256
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.48 E-value=0.048 Score=44.82 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 181 (290)
.++++||+|+ +++|.+.++.+...|+ .|+.+++++. ..+.++..+... .+..+- ..++..+.+++..+. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence 4689999987 9999999998889999 4666655432 223334454321 222222 223333344443322 3469
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 257
>PLN03139 formate dehydrogenase; Provisional
Probab=96.48 E-value=0.078 Score=46.40 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=63.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|++|.|.|.|.+|...++.++.+|+ .+++.+.+....+..+..+.... .++. ++. ...|+|+-
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLD----AML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHH----HHH----hhCCEEEE
Confidence 57799999999999999999999999 57888776544444445553211 1222 222 23788888
Q ss_pred ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKTM-----STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 214 (290)
++...... ...+..|+++..+|.++...
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 294 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARGA 294 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence 77653322 24677889999998887654
No 258
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.47 E-value=0.043 Score=45.41 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=48.7
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
+++++||+|+ +++|.+.++.+...|+ .|+.+.+.++..+.+++ ++....+..|-. .++..+.+.+..+ ..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK-HW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH-Hh
Confidence 4678999983 5899999998888999 46665554433333332 343233333322 2233333444333 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 579999999875
No 259
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.47 E-value=0.011 Score=53.14 Aligned_cols=91 Identities=11% Similarity=0.151 Sum_probs=57.6
Q ss_pred cCCCCCCeEE----EECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHH
Q 022879 103 ANIGPETNVL----IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 103 ~~~~~~~~vl----I~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++++|+++| |+|+ |++|.+++|+++.+|+ .|+++...+++....+..+.. .+++ .....+.+.+..+.
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~~-- 103 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKALY-- 103 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHHH--
Confidence 5778999988 8865 9999999999999999 477775555543333333333 2333 22223333333221
Q ss_pred hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
......++.|.++|+++.++..
T Consensus 104 ---------------~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 104 ---------------EFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred ---------------HHHHHHHHhccCCCEEEEEccc
Confidence 3445566777788888888753
No 260
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.47 E-value=0.035 Score=48.90 Aligned_cols=93 Identities=23% Similarity=0.301 Sum_probs=56.9
Q ss_pred EEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH--cC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 111 VLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE--IG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 111 vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~--lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
|+|.|+|.+|..+++++...+-. .+++.+++.++.+.+.. .+ .......+. .+.. .+.++. .+.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence 68888899999999988877643 68889999999765543 22 112222222 2222 255543 35699999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEe
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
|+|.......+-.++..+-.|+..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999753444455566777788873
No 261
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.046 Score=44.99 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=50.3
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
.++++||+|++ ++|.+.++.+...|+ .|+.+.++++..+.++++... ..+..|- +.++..+.+++..+.. +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 57899999874 899999998888999 577776765444444544322 1222222 2223333334333222 46
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998874
No 262
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.052 Score=44.52 Aligned_cols=82 Identities=15% Similarity=0.187 Sum_probs=51.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ ++ .+.. ..+..+- ..++..+.++++.+.. +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 3578999987 9999999999999999 688888876655433 22 2321 2222222 1223333333433222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 263
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.049 Score=44.79 Aligned_cols=82 Identities=21% Similarity=0.185 Sum_probs=51.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +++ +.. ..+..+- ..+++...+++..+.. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence 5679999987 9999999999889999 578888877665433 222 221 1222222 2223333333333222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
.+|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999874
No 264
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.45 E-value=0.017 Score=48.43 Aligned_cols=75 Identities=15% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.+.+++|.|+|+.+.+++.-+..+|++.+.++.++.+|.+.+ +.++... +... ++.+.+.+ .-..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~-----~~~~~~~~----~~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL-----EGDSGGLA----IEKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec-----cchhhhhh----cccCCCEE
Confidence 578999999999999999999999998898999998776644 4443211 1111 00011111 11468999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|+|++.
T Consensus 195 InaTp~ 200 (282)
T TIGR01809 195 VSTVPA 200 (282)
T ss_pred EECCCC
Confidence 999875
No 265
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.45 E-value=0.051 Score=44.80 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=49.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
.++++||+|+ +++|...++.+...|+ .++.+.++++..+ .....+.. ..+..+-. .++..+.+++..+ ..++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE-EFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence 5789999988 9999999999888999 5666666532222 22233322 22222222 2223333444332 2346
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 266
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.044 Score=44.60 Aligned_cols=83 Identities=22% Similarity=0.343 Sum_probs=51.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC-C-EE--EecCC-CcccHHHHHHHHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA-D-NI--VKVST-NLQDIAEEVEKIQKA 176 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~-~-~~--~~~~~-~~~~~~~~~~~~~~~ 176 (290)
++++++|+|+ |++|...++.+...|+ .|+.+++++++.+.+ +++ +. . .. .+... ..+++.....++...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4579999987 9999999998888899 588888887665433 222 21 1 11 22211 122333333333332
Q ss_pred hCCCccEEEEccCC
Q 022879 177 MGTGIDVSFDCAGL 190 (290)
Q Consensus 177 ~~~~~d~vid~~g~ 190 (290)
....+|++|++.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32468999999984
No 267
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.061 Score=43.76 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=51.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
....++||+|+ |.+|..++..+...|. .|+++++++++.+.+. ..+.. ..+..+-. .+++.+.++++.+ ..
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE-QF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence 34578999987 9999999999988999 6888888876654332 22222 12222221 2233333333332 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|+++++.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 469999999984
No 268
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.049 Score=44.59 Aligned_cols=82 Identities=23% Similarity=0.236 Sum_probs=50.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc--CCC-EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l--g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (290)
++.++||+|+ |.+|...++.+...|+ .++.+.+++++.+. .+.+ +.. ..+..+-.+ ++..+.++++.+ ..++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAA-RWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence 4678999988 9999999998888898 57777777655432 2222 221 222222222 223333333322 2357
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|+++++.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 269
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.053 Score=44.52 Aligned_cols=82 Identities=27% Similarity=0.356 Sum_probs=51.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +..+.. ..+..+-. ..+..+.+++..+.. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4689999988 9999999998888899 588888887654322 233322 22222221 222333333333222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 270
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.052 Score=45.20 Aligned_cols=82 Identities=23% Similarity=0.280 Sum_probs=50.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC------CCEEEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG------ADNIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg------~~~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+. .+.+. .-.++..+-. .++....+++..+ .
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA-W 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence 3679999998 9999999999998999 58888777665432 22221 1122222221 2223333333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
..++|++|++.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 3478999999873
No 271
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.049 Score=44.91 Aligned_cols=82 Identities=27% Similarity=0.291 Sum_probs=51.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCC-CcccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~-~~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +.+ +.. ..+..+- +.+++.+.++++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA- 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 4678999987 9999999998888999 577777777665433 222 211 1222222 222333444443332
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+.+|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999999884
No 272
>PLN02253 xanthoxin dehydrogenase
Probab=96.44 E-value=0.048 Score=45.54 Aligned_cols=82 Identities=22% Similarity=0.283 Sum_probs=50.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
.++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+ ..+.++. ...+..+-. .++..+.++.+.+. -++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence 4678999987 9999999998888899 5777777665443 3333431 122222222 22333333333332 246
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 273
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.051 Score=44.84 Aligned_cols=81 Identities=26% Similarity=0.341 Sum_probs=50.9
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--CCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG--ADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 183 (290)
+++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +.++ ....+..+-.+ .++.+.+....+...+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47999988 9999999998888899 578888887776544 3333 11222222222 22333333332221457999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
++++.|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999985
No 274
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.036 Score=44.57 Aligned_cols=77 Identities=27% Similarity=0.358 Sum_probs=50.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHH-HHhCCCccEEEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-KAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~vid 186 (290)
++++|+|+ |.+|...++.+...|+ .++.+++++++.+.++..+.. .+..+-.+.+ .++++. +..+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAE-ALALDVADPA---SVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccce-EEEecCCCHH---HHHHHHHHhcCCCCCEEEE
Confidence 47899987 9999999987777899 578888887777666655533 2222222222 222221 113347999999
Q ss_pred ccCC
Q 022879 187 CAGL 190 (290)
Q Consensus 187 ~~g~ 190 (290)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8875
No 275
>PRK01581 speE spermidine synthase; Validated
Probab=96.43 E-value=0.11 Score=44.85 Aligned_cols=100 Identities=16% Similarity=0.154 Sum_probs=65.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-----------CEEEecCCCcccHHHHHHH
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-----------DNIVKVSTNLQDIAEEVEK 172 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-----------~~~~~~~~~~~~~~~~~~~ 172 (290)
.....++|||.|+|. |.++..+++..+.+.+++++-+++-.+.++.+.. ..+-. .-.|-.+.++
T Consensus 147 ~h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v---vi~Da~~fL~- 221 (374)
T PRK01581 147 KVIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV---HVCDAKEFLS- 221 (374)
T ss_pred hCCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE---EECcHHHHHH-
Confidence 345567999998764 6677888887666789999999999998886310 11100 0122222232
Q ss_pred HHHHhCCCccEEEEccCC-----------HHHHHHHHHHhccCCEEEEec
Q 022879 173 IQKAMGTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g 211 (290)
.....||+||--... .+.+..+.+.|+++|.++.-.
T Consensus 222 ---~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 222 ---SPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred ---hcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 234579999765422 125667888999999988764
No 276
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.43 E-value=0.053 Score=44.69 Aligned_cols=82 Identities=18% Similarity=0.294 Sum_probs=50.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCcc-cHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +..+... .+..+-.+. ++.+.+.+... ...
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 4679999988 9999999998888999 577777777554322 2334332 222222222 22223333222 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999999875
No 277
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.055 Score=43.87 Aligned_cols=82 Identities=27% Similarity=0.282 Sum_probs=51.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC---CCEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG---ADNIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
.+.+++|+|+ |.+|...++.+...|+ .|+++++++++... .+.+. ....+..+- ...++.+.++++.+. ..+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999988 9999999998888899 58888887766543 34442 112222221 222333334443322 247
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 278
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.42 E-value=0.054 Score=45.22 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (290)
++.+++|+|+ |++|.+.++.+...|+ .|+.+++++++.+. .++ .+.. ..+..+-.+. +....++++.+ .-+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE-DFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 4688999987 9999999999988999 57777777655432 222 2322 1222222222 23333333322 224
Q ss_pred CccEEEEccC
Q 022879 180 GIDVSFDCAG 189 (290)
Q Consensus 180 ~~d~vid~~g 189 (290)
++|++|++.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 279
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.39 E-value=0.14 Score=41.52 Aligned_cols=99 Identities=23% Similarity=0.272 Sum_probs=63.3
Q ss_pred HHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCC----hhH--------HHHHHHcCCCEEEecCCC
Q 022879 98 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAP--RIVIVDVD----DYR--------LSVAKEIGADNIVKVSTN 162 (290)
Q Consensus 98 ~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~ 162 (290)
.+++... --.+.+++|.|+|+.|..++..+...|++ +++.++++ .++ .++++.++... .
T Consensus 14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~----- 87 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T----- 87 (226)
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----
Confidence 3444433 24568999999999999999999999998 89999887 333 33445543211 0
Q ss_pred cccHHHHHHHHHHHhCCCccEEEEccCCHHHH-HHHHHHhccCCEEEEec
Q 022879 163 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG 211 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g 211 (290)
..++.+.+ .++|++|++++. ..+ ...++.+.+...+..+.
T Consensus 88 ~~~l~~~l--------~~~dvlIgaT~~-G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 88 GGTLKEAL--------KGADVFIGVSRP-GVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred cCCHHHHH--------hcCCEEEeCCCC-CCCCHHHHHhhCCCCEEEEeC
Confidence 01222222 248999999973 333 35667777776666554
No 280
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.39 E-value=0.057 Score=42.28 Aligned_cols=97 Identities=21% Similarity=0.248 Sum_probs=62.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
++++.+||-.|+|. |..++.+++......|++++.+++..+.+++ .+.+.+.... .+. .++. ....
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~---~d~----~~~~--~~~~ 112 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVH---GRA----EEFG--QEEK 112 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEe---ccH----hhCC--CCCC
Confidence 55688999888755 6666666665543479999999887766643 4443221111 121 1111 1357
Q ss_pred ccEEEEccCC--HHHHHHHHHHhccCCEEEEec
Q 022879 181 IDVSFDCAGL--NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 181 ~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g 211 (290)
||+|+-.... +..+..+.+.|+++|+++.+-
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999874332 356778889999999999773
No 281
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.37 E-value=0.08 Score=45.22 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=57.7
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 188 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 188 (290)
+|||+|+ |-+|...++.+...|. .|.++.++.++...+...+.+.+ ..+-.++ +.+.+.. .++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v-~~Dl~d~---~~l~~al----~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELV-YGDLSLP---ETLPPSF----KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEE-ECCCCCH---HHHHHHH----CCCCEEEECC
Confidence 6899998 9999999998888898 57777777766555444554332 2121111 2233221 3689999987
Q ss_pred CCHH------------HHHHHHHHhccCC--EEEEecc
Q 022879 189 GLNK------------TMSTALGATCAGG--KVCLVGM 212 (290)
Q Consensus 189 g~~~------------~~~~~~~~l~~~G--~~v~~g~ 212 (290)
+... ....+++.++..| +++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 6310 1123445554444 7887775
No 282
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.37 E-value=0.058 Score=44.42 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=49.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCC--CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGA--DNIVKVSTNL-QDIAEEVEKIQKAMG 178 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~--~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (290)
++++||+|+ |.+|...++.+...|+ .++.++++.++.+.. +. .+. ...+..+-.+ ++....+.++.+. -
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 468999988 9999999998888899 578887776654322 22 221 1222222222 2233333333222 2
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|+++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 479999999874
No 283
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.058 Score=45.02 Aligned_cols=83 Identities=24% Similarity=0.250 Sum_probs=49.5
Q ss_pred CCCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCCEEEecCCC-cccHHHHHHHHHHHh
Q 022879 106 GPETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 106 ~~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
-.++++||+|+ +++|.+.++.+...|+ .|+.+.+++ ++.+ +.++++....+..+-. .++..+.++++.+ .
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK-K 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH-h
Confidence 35688999986 5899999998888999 566665553 2222 2244553223333222 2233333333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|+++++.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 3479999999874
No 284
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.37 E-value=0.044 Score=44.92 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=48.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 181 (290)
.+.++||+|+ |.+|...+..+...|++ ++.+ .+++++.+ ....++.. ..+..+- ..+++.+.+++..+..+.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3578999987 99999999988888995 5444 44444433 33334422 1222222 12233334444333334459
Q ss_pred cEEEEccC
Q 022879 182 DVSFDCAG 189 (290)
Q Consensus 182 d~vid~~g 189 (290)
|++|++.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999876
No 285
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.36 E-value=0.11 Score=44.49 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=65.5
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHH-HHHCCCCeEEEEeCChhHHHH-HHHc----CCCEEEecCCCcccHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLA-ARAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
+....+...+++|.|+|..|...+.. +...+++.+.+.++++++.+. .+.+ +.. +..+ .++.+.+
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~---- 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI---- 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH----
Confidence 33333567789999999999776654 456788889999999887653 3333 332 2222 2222222
Q ss_pred HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
...|+|+.|+++...+- . ..++++-.+..+|...
T Consensus 191 ----~~aDiVi~aT~s~~p~i-~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 191 ----EEADIIVTVTNAKTPVF-S-EKLKKGVHINAVGSFM 224 (325)
T ss_pred ----hcCCEEEEccCCCCcch-H-HhcCCCcEEEecCCCC
Confidence 35899999999764333 3 8889888888888654
No 286
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.36 E-value=0.064 Score=43.52 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=49.7
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
++++||+|+ +++|...++.+...|+ .|+.+++++++ .+.++..+.. .+..+- ..++..+.+.++.+ .-+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQ-HTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHh-hCCCccEE
Confidence 468999987 9999999998888899 57777666543 3334445532 232222 22233333333322 22469999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 287
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.36 E-value=0.064 Score=43.81 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=50.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC-CEEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|+ .|+.++++.++...+ +..+. ..++..+-.+ +++.+.++++.+ .-.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ-ALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 4678999988 9999999998888899 577777776554432 22232 2223332222 223333333322 234
Q ss_pred CccEEEEccC
Q 022879 180 GIDVSFDCAG 189 (290)
Q Consensus 180 ~~d~vid~~g 189 (290)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999997
No 288
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.35 E-value=0.063 Score=44.11 Aligned_cols=82 Identities=28% Similarity=0.456 Sum_probs=50.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +++ +.. ..+..+-.+ +++.+.+..+.+ ...
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK-DIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH-hcC
Confidence 4678999987 9999999998888899 577787776654332 222 221 122222222 223333333322 235
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999974
No 289
>PRK00536 speE spermidine synthase; Provisional
Probab=96.35 E-value=0.022 Score=47.00 Aligned_cols=102 Identities=10% Similarity=-0.123 Sum_probs=67.5
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
.....++|||.|+|. |.++-+++|.-. .|+.++-+++-.++.++ ++.-.- .+++..-.+...+. +...+.||
T Consensus 69 ~h~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~---~~~~~~fD 141 (262)
T PRK00536 69 TKKELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLL---DLDIKKYD 141 (262)
T ss_pred hCCCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhh---hccCCcCC
Confidence 346679999998766 557788998853 79999999998888887 331100 11122222211221 22335799
Q ss_pred EEE-EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879 183 VSF-DCAGLNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 183 ~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
+|| |++-.++....+.+.|+++|.++.-..
T Consensus 142 VIIvDs~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 142 LIICLQEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred EEEEcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence 985 546666677789999999999997643
No 290
>PRK04457 spermidine synthase; Provisional
Probab=96.35 E-value=0.091 Score=43.57 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=65.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC----CEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA----DNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
.++++||+.|.|+ |..+..+++......+++++-+++-.+.+++. +. ..+-.. ..|..+.+.+ ....
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~----~~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV----HRHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh----CCCC
Confidence 4567899999876 77888888877544799999999999888763 31 111111 1233333332 2457
Q ss_pred ccEEE-EccCC---------HHHHHHHHHHhccCCEEEEe
Q 022879 181 IDVSF-DCAGL---------NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 181 ~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~ 210 (290)
+|+|+ |.... .+.+..+.+.|+++|.++.-
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 99996 33211 35678899999999999873
No 291
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.073 Score=43.86 Aligned_cols=81 Identities=20% Similarity=0.171 Sum_probs=50.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 181 (290)
+.++||+|+ |++|...++.+...|+ .++.+++++++.+.. +.+.. ...+..+-. .+++.+.++++.+.. +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 468999987 9999999998888899 578888877765543 33321 112222222 223333333333222 358
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999999874
No 292
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.32 E-value=0.041 Score=47.11 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=33.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 148 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 148 (290)
.|++++|+|+ +++|.+.++.+...|+ .|+.+++++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHH
Confidence 4789999998 9999998888878899 478888888776543
No 293
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.32 E-value=0.15 Score=38.69 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=53.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|.+|+|.|+|.+|..-++.+...|+ .|.+++ ++..+.++.++...... ..+. +..-.++|+||-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~~-----~~~~-------~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWKQ-----KTFS-------NDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEEe-----cccC-------hhcCCCceEEEE
Confidence 57899999999999988888888899 466663 33333334454222211 1111 112356899999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEe
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
+++.+ .++..+...+..+.++..
T Consensus 77 aT~d~-e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 77 ATNQH-AVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CCCCH-HHHHHHHHHHHHCCcEEE
Confidence 99975 455555544433334443
No 294
>PRK09242 tropinone reductase; Provisional
Probab=96.32 E-value=0.076 Score=43.69 Aligned_cols=82 Identities=23% Similarity=0.285 Sum_probs=51.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +++ +.. ..+..+-. .+++.+.+.++.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH- 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence 4789999988 9999999999999999 577777777665433 222 111 11222211 22333333333322
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|+++++.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 3479999999985
No 295
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.31 E-value=0.071 Score=43.77 Aligned_cols=82 Identities=27% Similarity=0.376 Sum_probs=50.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |.+|...++.+...|. .++.+++++++.+.. .++ +.. ..+..+-. .+++.+.+..+.+ ...
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE-TFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 3578999987 9999999998888899 577787877664432 222 322 12222222 2233333333322 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|.++|.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 296
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.056 Score=44.37 Aligned_cols=78 Identities=23% Similarity=0.198 Sum_probs=48.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 183 (290)
.++++||+|+ |++|...++.+...|+ .++.+++++++ +..+. ...+..+-. .+++.+.+..+.+ ....+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVE-RHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4689999987 9999999998888999 57777777654 11221 112222211 2233333333332 2346899
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999874
No 297
>PRK06398 aldose dehydrogenase; Validated
Probab=96.30 E-value=0.036 Score=45.81 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=48.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.++++||+|+ +++|.+.+..+...|+ .|+.+++++.+.. ....+..+- +.++..+.+++..+ .-+.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVIS-KYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 4679999988 9999999999999999 5777777654322 111222222 22233344444332 23469999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 298
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.30 E-value=0.035 Score=50.46 Aligned_cols=73 Identities=26% Similarity=0.421 Sum_probs=52.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
+.++++|+|+|.|..|++++++++..|+ .|++.+..+.+.+.++++|.... .. . ...+.+ ..+|+|
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~---~~~~~l--------~~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-S---DAVQQI--------ADYALV 74 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-c---chHhHh--------hcCCEE
Confidence 4578899999999999999999999999 58888877666666667776432 11 1 111111 247999
Q ss_pred EEccCCH
Q 022879 185 FDCAGLN 191 (290)
Q Consensus 185 id~~g~~ 191 (290)
+.+.|.+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9998875
No 299
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.061 Score=45.63 Aligned_cols=82 Identities=22% Similarity=0.279 Sum_probs=49.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----C-CC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----G-AD-NIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g-~~-~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ |++|..+++.+...|+ .++.+.++.++.+. .+.+ + .. ..+..+-. .++..+.++++.+ .
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA-A 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh-h
Confidence 5689999988 9999999998888899 57777777665432 2222 1 11 12222222 2223333333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-.++|++|+++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 3469999999874
No 300
>PRK04148 hypothetical protein; Provisional
Probab=96.28 E-value=0.28 Score=35.93 Aligned_cols=95 Identities=12% Similarity=0.180 Sum_probs=64.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
..++.++++.|.| .|...+..+..+|. .|++++.+++..+.++..+...+.+ +--++++ ++ =.++|+|
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~-----~~----y~~a~li 81 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL-----EI----YKNAKLI 81 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH-----HH----HhcCCEE
Confidence 3456889999998 78755556667898 7999999999999888887655443 1111221 11 1368999
Q ss_pred EEccCCHHHHHHHHHHhccC-CEEEEec
Q 022879 185 FDCAGLNKTMSTALGATCAG-GKVCLVG 211 (290)
Q Consensus 185 id~~g~~~~~~~~~~~l~~~-G~~v~~g 211 (290)
...-..++....+++..+.- ..++..-
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIKP 109 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 99888877777777766554 4444443
No 301
>PRK09186 flagellin modification protein A; Provisional
Probab=96.28 E-value=0.077 Score=43.55 Aligned_cols=81 Identities=23% Similarity=0.340 Sum_probs=50.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCE--EEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN--IVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~--~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ |.+|...+..+...|+ .++.+.+++++.+.+ +.+ +... ++..+-. .+++.+.+++..+ .
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~-~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE-K 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH-H
Confidence 4689999988 9999999999988999 577777777665432 332 2211 1122222 2233344444332 2
Q ss_pred CCCccEEEEccC
Q 022879 178 GTGIDVSFDCAG 189 (290)
Q Consensus 178 ~~~~d~vid~~g 189 (290)
-.++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 246999999985
No 302
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.073 Score=44.48 Aligned_cols=82 Identities=28% Similarity=0.404 Sum_probs=50.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
.++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .+++ +.. ..+..+- ..+++.+.+.+..+ .-+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR-LLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence 4678999987 9999999998888999 57777777655442 2222 322 1222221 12233333333322 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 303
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.27 E-value=0.068 Score=44.33 Aligned_cols=81 Identities=17% Similarity=0.207 Sum_probs=47.7
Q ss_pred CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.++++||+|+ + ++|.+.++.+...|+ .++.++++++..+.+++ .+....+..+-. .++..+.+++..+ .-
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK-VW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh-hc
Confidence 4678999987 3 799998888888899 46666665322222322 232222322222 2233333443332 22
Q ss_pred CCccEEEEccC
Q 022879 179 TGIDVSFDCAG 189 (290)
Q Consensus 179 ~~~d~vid~~g 189 (290)
+.+|++|++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46999999997
No 304
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.25 E-value=0.077 Score=44.06 Aligned_cols=81 Identities=23% Similarity=0.443 Sum_probs=52.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY----RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
.|+.|||+|+ +++|.+.++-...+|+ +++..+.+++ ..+..+..|.- ...|. +..++.....++..+..|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhcC-
Confidence 6899999987 8999888777777788 5767766653 33333444412 22232 234455554455544444
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
.+|++++++|.
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999999886
No 305
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.24 E-value=0.078 Score=43.59 Aligned_cols=82 Identities=17% Similarity=0.234 Sum_probs=49.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 181 (290)
.++++||+|+ |++|.+.++.+...|+ .|+.++..+. ..+.++.++.. ..+..+- ..++..+.++++.+. ..++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence 4679999987 9999999999888999 5666654432 22333344422 1222222 222334444444332 3479
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999975
No 306
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.091 Score=43.38 Aligned_cols=81 Identities=23% Similarity=0.347 Sum_probs=49.4
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
+.++||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ + ..+... ++..+-. .+++...+++..+ .-.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVA-RFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcCC
Confidence 357999988 9999999998888898 688888886654422 2 233221 2222221 2223333333322 2246
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 307
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.23 E-value=0.077 Score=37.10 Aligned_cols=88 Identities=17% Similarity=0.263 Sum_probs=57.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.+.+|||.|+|.+|..-++.+...|+ .+.+++... +..+ +.-.... ..+.+ .-.++++||-
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence 57899999999999999999999999 677776664 2222 2111221 12211 1256999999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+++.+..-.......+..|.++.....
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDD 93 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCC
Confidence 999866655666677778988887643
No 308
>PRK12743 oxidoreductase; Provisional
Probab=96.23 E-value=0.072 Score=43.87 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=48.0
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH----HHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++++||+|+ +++|..+++.+...|++ |+.+ .++.++.+. ++..+.. ..+..+-. .++..+.+.++.+ .-.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQ-RLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 468999988 99999999999999995 5544 444443322 2334432 22222222 2233333333332 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 309
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.076 Score=43.73 Aligned_cols=83 Identities=20% Similarity=0.313 Sum_probs=50.1
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhH-HH-HHH---HcCC--CEEEecCCCc-ccHHHHHHHHH
Q 022879 105 IGPETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYR-LS-VAK---EIGA--DNIVKVSTNL-QDIAEEVEKIQ 174 (290)
Q Consensus 105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~-~~-~~~---~lg~--~~~~~~~~~~-~~~~~~~~~~~ 174 (290)
+..+.++||+|+ |++|...++.+... |+ .|+.+++++++ .+ ..+ ..+. -.++..+-.+ ++..+.+++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 566789999988 99999999876666 47 57777776654 22 223 3332 1233333222 23333344443
Q ss_pred HHhCCCccEEEEccCC
Q 022879 175 KAMGTGIDVSFDCAGL 190 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~ 190 (290)
+ .+++|+++++.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 2 2579999988765
No 310
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.22 E-value=0.085 Score=43.42 Aligned_cols=82 Identities=32% Similarity=0.358 Sum_probs=51.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 182 (290)
.++++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++.. ..+..+-. .++..+.++++.+. -.++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 3578999988 9999999999988999 578888887765543 334422 12222222 22333333333222 24699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998874
No 311
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.085 Score=43.95 Aligned_cols=80 Identities=20% Similarity=0.160 Sum_probs=50.6
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.++||+|+ |.+|...++.+...|. .++++.+++++.+.++. .+.. ..+..+-. .+++.+.++++.+ ...++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA-ALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 57999987 9999999988888899 57888888877665543 2321 12222211 2223333333322 23568999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 312
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.087 Score=43.32 Aligned_cols=82 Identities=16% Similarity=0.253 Sum_probs=49.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHHHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-R-LSVAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
++.++||+|+ +++|.+.++.+...|+ .++.++++++ . .+..+ ..+.. ..+..+-. .++..+.+++..+ .-
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA-EL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence 4678999987 9999999999988999 5666666542 2 22222 23322 22222222 2233333333332 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 569999999984
No 313
>PRK07985 oxidoreductase; Provisional
Probab=96.21 E-value=0.19 Score=42.43 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=47.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ +++|.+.++.+...|++ |+.+.++ .++.+.+ +..+... .+..+-. .++..+.+++..+ .
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK-A 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH-H
Confidence 5678999988 99999999988889994 6665433 2222222 2333221 2222222 2233333333332 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|+++++.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 3479999998873
No 314
>PLN02366 spermidine synthase
Probab=96.21 E-value=0.057 Score=45.83 Aligned_cols=101 Identities=25% Similarity=0.281 Sum_probs=64.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC------CEEEecCCCcccHHHHHHHHHHHh
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA------DNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
....++||+.|+|. |..+..+++.-+...+.+++-+++-.+.++++ .. +.-+.+ ...|-.+.+++ ..
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~v--i~~Da~~~l~~---~~ 162 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNL--HIGDGVEFLKN---AP 162 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEE--EEChHHHHHhh---cc
Confidence 46678999998866 66777888887766899999998877777663 21 100110 01222222222 12
Q ss_pred CCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879 178 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 178 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 211 (290)
++.||+||--... .+.+..+.+.|+++|.++.-.
T Consensus 163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 4579999764322 135677889999999997654
No 315
>PRK06720 hypothetical protein; Provisional
Probab=96.21 E-value=0.14 Score=39.48 Aligned_cols=82 Identities=23% Similarity=0.315 Sum_probs=49.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++.+++|+|+ +++|...+..+...|+ .++.++.++++.+.. + ..+.. ..+..+-. .+++.+.+.+..+. -+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 5778999987 8999999988888898 578887776554322 2 23422 22332221 12333333333222 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999999884
No 316
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.097 Score=42.76 Aligned_cols=81 Identities=22% Similarity=0.274 Sum_probs=49.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc-----CC-CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI-----GA-DNIVKVSTNL-QDIAEEVEKIQKAMG 178 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l-----g~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (290)
++++||+|+ |++|...++.+...|. .++.+++++++.+.+. .+ +. -..+..+-.+ +++.+.++++.. .-
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD-EL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence 468999987 9999988888888898 5777778776654332 11 11 1222222222 233333343332 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|++|++.|.
T Consensus 80 ~~id~vi~~ag~ 91 (248)
T PRK08251 80 GGLDRVIVNAGI 91 (248)
T ss_pred CCCCEEEECCCc
Confidence 569999999873
No 317
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.19 E-value=0.045 Score=45.97 Aligned_cols=43 Identities=30% Similarity=0.414 Sum_probs=37.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 148 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 148 (290)
..+.+++|.|+|++|.+++..+...|++.+..++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3567999999999999999999999998899999998876644
No 318
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.19 E-value=0.089 Score=43.83 Aligned_cols=84 Identities=24% Similarity=0.276 Sum_probs=52.6
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H---cCCC----EEEecCCCcc-cHHHHHHHHHH
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E---IGAD----NIVKVSTNLQ-DIAEEVEKIQK 175 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---lg~~----~~~~~~~~~~-~~~~~~~~~~~ 175 (290)
-.+..+||+|+ .++|.+.+..+...|+ +|+.+++++++.+... . .+.. ..+..+-..+ +..+.+....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 36788999987 9999999999999999 6777878877754332 2 2221 1222222222 23333333222
Q ss_pred HhCCCccEEEEccCC
Q 022879 176 AMGTGIDVSFDCAGL 190 (290)
Q Consensus 176 ~~~~~~d~vid~~g~ 190 (290)
...+++|+++++.|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 225679999998876
No 319
>PLN02823 spermine synthase
Probab=96.17 E-value=0.082 Score=45.41 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=62.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-C-EEEecCC----CcccHHHHHHHHHHHhCC
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-D-NIVKVST----NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~-~~~~~~~----~~~~~~~~~~~~~~~~~~ 179 (290)
...++|||.|+|. |..+.++++..+.+.+++++-+++-.++++++-. . ..+. +. ...|-...+ +...+
T Consensus 102 ~~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~-dprv~v~~~Da~~~L----~~~~~ 175 (336)
T PLN02823 102 PNPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFC-DKRLELIINDARAEL----EKRDE 175 (336)
T ss_pred CCCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhccccccccc-CCceEEEEChhHHHH----hhCCC
Confidence 3567999998765 5667778887777789999999999998877421 1 0000 00 012222222 23456
Q ss_pred CccEEEEccCC------------HHHHH-HHHHHhccCCEEEEe
Q 022879 180 GIDVSFDCAGL------------NKTMS-TALGATCAGGKVCLV 210 (290)
Q Consensus 180 ~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~v~~ 210 (290)
.+|+||--... .+.+. .+.+.|+++|.++.-
T Consensus 176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 79999653211 12344 677889999998754
No 320
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.16 E-value=0.16 Score=44.28 Aligned_cols=83 Identities=19% Similarity=0.108 Sum_probs=48.2
Q ss_pred CCCCeEEEECC-CHHHHH--HHHHHHHCCCCeEEEEeCCh---h-------------HHHHHHHcCCC-EEEecCCC-cc
Q 022879 106 GPETNVLIMGA-GPIGLV--TMLAARAFGAPRIVIVDVDD---Y-------------RLSVAKEIGAD-NIVKVSTN-LQ 164 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~-~~~~~~~~-~~ 164 (290)
..++++||+|+ +++|.+ .++.+ ..|++ +++++... + -.+.++.+|.. ..+..+-. .+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 45678999987 899998 45555 78994 56665321 1 12344556643 23333322 23
Q ss_pred cHHHHHHHHHHHhCCCccEEEEccCCH
Q 022879 165 DIAEEVEKIQKAMGTGIDVSFDCAGLN 191 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~d~vid~~g~~ 191 (290)
+..+.++++.+. -+++|+++++++.+
T Consensus 117 ~v~~lie~I~e~-~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQD-LGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence 333344444332 35699999998875
No 321
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.095 Score=43.66 Aligned_cols=81 Identities=23% Similarity=0.207 Sum_probs=51.0
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
+.++||+|+ |.+|...++.+...|. .|+.+++++++.+.+.. ++.. ..+..+- ..+++.+.+..+.+ .-.++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 468999987 9999999998888898 57888888776554433 3321 2222222 12233333333332 2247899
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999885
No 322
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.15 E-value=0.15 Score=43.87 Aligned_cols=90 Identities=22% Similarity=0.244 Sum_probs=62.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|++|.|.|.|.+|...++.++.+|+ .|++.+++.+.. ....++.. + .++.+.+ ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~ell--------~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLEELL--------RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHHHHH--------hhCCEEEE
Confidence 57899999999999999999999999 588887765433 23334431 1 1222222 23689988
Q ss_pred ccCCHHH----H-HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKT----M-STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~ 214 (290)
++..... + ...++.++++..++.++...
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 8875332 1 35678889999999887654
No 323
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.062 Score=44.59 Aligned_cols=79 Identities=20% Similarity=0.264 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.+.+++|+|+ |.+|...++.+...|+ .|+++++++++.+.. -+. ..+..+- +.+++.+.++...+ ..+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~-~~~~~D~~d~~~~~~~~~~~~~-~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGV-ELLELDVTDDASVQAAVDEVIA-RAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCC-eeEEeecCCHHHHHHHHHHHHH-hCCCCCEE
Confidence 3568999988 9999999998888899 588887776554321 122 2222222 22334444444433 23469999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999985
No 324
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.13 E-value=0.1 Score=42.93 Aligned_cols=82 Identities=17% Similarity=0.235 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ +++|...+..+...|+ .++.+++++++.+.+ +..+.. ..+..+-.+ ++..+.++.+.+ .-.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS-KLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4689999987 9999999998888899 467777776654432 222322 222222222 223333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 325
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.087 Score=43.95 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=49.8
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC---CEEEecCCC-cccHHHHHHHHHHHhC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA---DNIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
+.++||+|+ |.+|...+..+...|+ .|+++++++++.+.+.. .+. ...+..+-. .+++.+ +++..+ .-
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~-~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK-EI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH-hc
Confidence 568999988 9999999998888899 57777777765543322 221 122222222 223333 444332 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999874
No 326
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.12 E-value=0.023 Score=46.48 Aligned_cols=108 Identities=28% Similarity=0.426 Sum_probs=65.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHH
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
+...+++||++|+=.|.|+ |.+...|+++.|.. .|+..+.++++.+.++ ..|....+.... .|..+.- +.
T Consensus 33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~~ 107 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--FD 107 (247)
T ss_dssp HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----S
T ss_pred HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--cc
Confidence 3457899999999988766 77888888877643 7999999998887664 355432221111 1111000 00
Q ss_pred HHhCCCccEEE-EccCCHHHHHHHHHHh-ccCCEEEEecc
Q 022879 175 KAMGTGIDVSF-DCAGLNKTMSTALGAT-CAGGKVCLVGM 212 (290)
Q Consensus 175 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~G~~v~~g~ 212 (290)
+.....+|.|| |--..-..+..+.+.| +++|+++.+.+
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 00124688775 4444345788999999 89999999865
No 327
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.12 E-value=0.11 Score=42.28 Aligned_cols=82 Identities=22% Similarity=0.283 Sum_probs=50.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 182 (290)
++.++||+|+ |.+|...++.+...|. .++...++.++.+.+ ..++.. ..+..+-. .+++.+.++++.+ .-.++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA-DLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 4679999987 9999999998888898 577666666655433 334422 22222222 2223333333322 234799
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
.+|++.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 328
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.11 E-value=0.067 Score=44.59 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=61.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC------CEEEecCCCcccHHHHHHHHHHHh
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA------DNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
.+.+++||+.|+|. |..+..+++......+.+++.+++-.+.+++. .. +.-+.. ...+..+.+++ .
T Consensus 70 ~~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~~----~ 142 (270)
T TIGR00417 70 HPNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLAD----T 142 (270)
T ss_pred CCCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHHh----C
Confidence 34556999998865 55666777766566899999998877777652 11 000110 01222222322 2
Q ss_pred CCCccEEEEccC----------CHHHHHHHHHHhccCCEEEEec
Q 022879 178 GTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 178 ~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 211 (290)
...+|+||-... ..+.++.+.+.|+++|.++...
T Consensus 143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 467999975332 1234567889999999998763
No 329
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.068 Score=44.05 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=47.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcc-cHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~ 183 (290)
+++++||+|+ |++|...++.+...|+ .|+.+++++... ++. ...+..+-.+. +..+.+.++.+ ..+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLE-RLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4689999987 9999999998888899 577777765432 121 11222222222 23333333322 2356999
Q ss_pred EEEccC
Q 022879 184 SFDCAG 189 (290)
Q Consensus 184 vid~~g 189 (290)
+|++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 330
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.09 E-value=0.084 Score=43.15 Aligned_cols=83 Identities=20% Similarity=0.173 Sum_probs=48.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-A---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...+..+...|++.++...++.++.+. . +..+.. ..+..+-. .++....+++..+. -.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4578999988 9999999999998999533334555544322 2 223322 22222222 22333333333322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 331
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.09 E-value=0.4 Score=39.14 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=59.4
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH-H---HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL-S---VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~---~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
+.++||+|+ |.+|...++.+...|++.++...++.++. + .++..+.. ..+..+- ...++...++++.+. -.+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence 578999987 99999999988889995333333332222 2 22333322 2222222 122333333444332 247
Q ss_pred ccEEEEccCC----------HH---------------HHHHHHHHhccCCEEEEeccC
Q 022879 181 IDVSFDCAGL----------NK---------------TMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 181 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+|.+|++.|. .+ ..+.+.+.++..|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 9999999983 11 122345555667899988753
No 332
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.08 E-value=0.026 Score=47.12 Aligned_cols=46 Identities=30% Similarity=0.377 Sum_probs=39.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG 152 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg 152 (290)
++++++|.|+|+.+.+++.-+...|+.+++++.++.+|.+.+ +.++
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 579999999999999999999999988899998988886654 4444
No 333
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.3 Score=40.01 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHH-HHHHHc---CCC-EEEecCCCc-ccHHHHHHHHHHH--
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRL-SVAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKA-- 176 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~-- 176 (290)
.++++||+|+ +++|.+.++.+...|++ ++.+ .+++++. +...++ +.. ..+..+-.+ ++....++++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4678999987 99999999999889995 5554 3443332 222222 321 112111111 1222223332211
Q ss_pred --hC-CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEeccCC
Q 022879 177 --MG-TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 177 --~~-~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
.+ .++|+++++.|.. + ..+.++..++..|+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 11 3799999998741 0 1122455566678999887543
No 334
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.07 E-value=0.1 Score=43.07 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=47.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH-HHH----cCCC-EEEecCCCc-ccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV-AKE----IGAD-NIVKVSTNL-QDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~-~~~----lg~~-~~~~~~~~~-~~~~~~~~~~~~~~ 177 (290)
+++++||+|+ +++|.+.++.+...|++ |+.+. +++++.+. .+. .+.. ..+..+-.+ ++..+.+.++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED- 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence 4689999988 99999999988889995 55553 44444332 222 2321 233322222 2333333333222
Q ss_pred CCCccEEEEccC
Q 022879 178 GTGIDVSFDCAG 189 (290)
Q Consensus 178 ~~~~d~vid~~g 189 (290)
-..+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 246999999885
No 335
>PRK08264 short chain dehydrogenase; Validated
Probab=96.06 E-value=0.047 Score=44.31 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=48.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.+.++||+|+ |.+|...++.+...|.+.|+.++++.++.+. .+.. ..+..+-.+. +.++++.+. -..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP---ASVAAAAEA-ASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH---HHHHHHHHh-cCCCCEE
Confidence 4678999987 9999999998888998557777777665442 3221 2222222111 123333221 2358999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 336
>PLN02928 oxidoreductase family protein
Probab=96.05 E-value=0.18 Score=43.63 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=61.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--C---CEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--A---DNIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
.|+++.|.|.|.+|..+++.++.+|+ .|++.+++..+... ..++ . ...........+ +.++. ...
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----L~ell----~~a 227 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHED----IYEFA----GEA 227 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccC----HHHHH----hhC
Confidence 57899999999999999999999999 68888776332111 1110 0 000000001122 33322 247
Q ss_pred cEEEEccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879 182 DVSFDCAGLNKT-----MSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 182 d~vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 214 (290)
|+|+.++..... -...++.|+++..+|.++...
T Consensus 228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~ 265 (347)
T PLN02928 228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG 265 (347)
T ss_pred CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence 999988765322 135778899999999998543
No 337
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.03 E-value=0.074 Score=40.10 Aligned_cols=96 Identities=23% Similarity=0.259 Sum_probs=58.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
..+.+++|.|+|.+|...++.+...|...+.+.++++++.+ +.+.++... +.. ...+..+. -.+.|+|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~--~~~~~~~~--------~~~~Dvv 85 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAI--AYLDLEEL--------LAEADLI 85 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cce--eecchhhc--------cccCCEE
Confidence 45688999999999999998888886446888888877655 445555421 000 00111111 2468999
Q ss_pred EEccCCHHH----HHHHHHHhccCCEEEEecc
Q 022879 185 FDCAGLNKT----MSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 185 id~~g~~~~----~~~~~~~l~~~G~~v~~g~ 212 (290)
+.|++.... .......++++..++.++.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 999986421 1111233555666666654
No 338
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=96.02 E-value=0.31 Score=41.22 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=48.2
Q ss_pred HHHHHH----hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE---eCChhHHHHHHHcCCCEEE
Q 022879 96 GVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIV 157 (290)
Q Consensus 96 a~~~l~----~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v---~~~~~~~~~~~~lg~~~~~ 157 (290)
||.++. ...+.||.+.||-.. |+.|...+-.+...|++ ++.+ ..+.||...++.||+.-+.
T Consensus 87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk-~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYK-CIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCce-EEEEechhhhHHHHHHHHHcCCEEEe
Confidence 666653 367999999999976 99999999999999995 5555 3446788899999987554
No 339
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.02 E-value=0.14 Score=41.97 Aligned_cols=82 Identities=16% Similarity=0.279 Sum_probs=51.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (290)
++.+++|+|+ |.+|...++.+...|+ .++.+++++++.+.+ +..+.. ..+..+- ..+++.+.+++.... -+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-HG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence 5789999988 9999999998888899 588888876654332 223321 2222222 222333333333322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 340
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.00 E-value=0.15 Score=43.99 Aligned_cols=35 Identities=37% Similarity=0.552 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|..+++.+...|...+..++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34789999999999999999999999888888775
No 341
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.99 E-value=0.13 Score=42.59 Aligned_cols=82 Identities=26% Similarity=0.295 Sum_probs=50.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ +++|...+..+...|++ ++.+.+++++.+.+ +..+.. ..+..+-.+ ++..+.+.++.+ .-+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK-EVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence 5678999987 99999999888888995 77777777654422 223322 222222222 222333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999875
No 342
>PRK04266 fibrillarin; Provisional
Probab=95.98 E-value=0.39 Score=38.89 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=61.4
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
+...++++++||=.|+|+ |..+..+++..+...|++++.+++..+.+.+ ...-..+.-+.. +. .....+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~--~~-~~~~~l--- 138 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR--KP-ERYAHV--- 138 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC--Cc-chhhhc---
Confidence 346789999999888754 4456667776653379999999977664422 211122211111 10 000011
Q ss_pred hCCCccEEEEccCCHH----HHHHHHHHhccCCEEEEe
Q 022879 177 MGTGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV 210 (290)
Q Consensus 177 ~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 210 (290)
...+|+++.....+. .+..+.+.|+|+|+++..
T Consensus 139 -~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 139 -VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred -cccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 134999996554322 357788899999999874
No 343
>PRK08317 hypothetical protein; Provisional
Probab=95.97 E-value=0.19 Score=40.66 Aligned_cols=100 Identities=23% Similarity=0.327 Sum_probs=66.7
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~ 174 (290)
+...+.++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.++.. +.. .+...+. .++
T Consensus 13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~-------- 81 (241)
T PRK08317 13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL-------- 81 (241)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC--------
Confidence 446788999999999876 888888888874 23799999999888877654 111 1111110 100
Q ss_pred HHhCCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEec
Q 022879 175 KAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 175 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
......+|+|+... .....+..+.+.|+++|.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 00234689887532 22346788999999999998765
No 344
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.95 E-value=0.35 Score=38.36 Aligned_cols=90 Identities=12% Similarity=0.166 Sum_probs=52.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-R-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.+.+|||.|+|.+|...++.+...|+ .+++++.... . .++++. +.-... .. .+.. ..-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~---~~--~~~~-------~~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWK---QK--EFEP-------SDIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEE---ec--CCCh-------hhcCCceEE
Confidence 56899999999999999988888898 5666654321 1 122222 211111 11 1110 112468999
Q ss_pred EEccCCHHHHHHHHHHhccCCEEEEec
Q 022879 185 FDCAGLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 185 id~~g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
|-+++.++ ++..+...+..+.++...
T Consensus 75 iaaT~d~e-lN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 75 IAATNDPR-VNEQVKEDLPENALFNVI 100 (202)
T ss_pred EEcCCCHH-HHHHHHHHHHhCCcEEEC
Confidence 99999854 454444444455666554
No 345
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.14 Score=42.76 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=48.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
+..++||+|+ |.+|...++.+...|+ .|+++.++.++.+.. +..+... .+..+-. .++..+.+++... .-+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE-ALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-hcC
Confidence 3468999987 9999999998888899 577776766544322 2233321 2222221 2223333333222 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999999875
No 346
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.13 Score=42.39 Aligned_cols=82 Identities=20% Similarity=0.227 Sum_probs=47.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH---cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.+.++||+|+ |.+|...++.+...|++ ++.+ .++.++.+ ..+. .+.. ..+..+-. .+++.+.+.+..+. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD-VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-L 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4678999988 99999999988888995 5444 33443332 2222 2322 12222221 22333333333222 2
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|++|++.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
No 347
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.026 Score=46.43 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=47.3
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
+.++||+|+ |.+|..+++.+...|+ .++++.+++++.+.+.. .+.. .++..+- .+. +.+.+. ...++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence 458999988 9999999999999999 57777777665544322 2221 1221111 121 123222 23479
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|++.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999999873
No 348
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.90 E-value=0.2 Score=40.14 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|...++.+...|...+..++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999888888776
No 349
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.15 Score=43.36 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=48.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----------hHHH----HHHHcCCC-EEEecCC-CcccHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----------YRLS----VAKEIGAD-NIVKVST-NLQDIAEE 169 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----------~~~~----~~~~lg~~-~~~~~~~-~~~~~~~~ 169 (290)
.++++||+|+ +++|.+.++.+...|+ .|+.++++. ++.+ .++..+.. ..+..+- ..++....
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4689999988 9999999999988999 577776652 2222 22333422 2222222 22334434
Q ss_pred HHHHHHHhCCCccEEEEcc-C
Q 022879 170 VEKIQKAMGTGIDVSFDCA-G 189 (290)
Q Consensus 170 ~~~~~~~~~~~~d~vid~~-g 189 (290)
+.+..+.. +++|++|++. |
T Consensus 86 ~~~~~~~~-g~iDilVnnA~g 105 (305)
T PRK08303 86 VERIDREQ-GRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHc-CCccEEEECCcc
Confidence 44443322 4699999988 5
No 350
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.90 E-value=0.14 Score=41.68 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=49.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |.+|...+..+...|+ .|++++++.++.... +..+.. .++..+-. .+++.+.++++.. ...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE-DFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence 4678999987 9999999998888899 578887875543322 222221 12222211 2223333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+|++.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 69999999865
No 351
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.1 Score=42.11 Aligned_cols=75 Identities=20% Similarity=0.295 Sum_probs=47.1
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
+++|+|+ +++|...++.+...|+ .++.+++++++.+.+ +.++.. .+..+-.+++ .++++.+.-...+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVD-AIVCDNTDPA---SLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCc-EEecCCCCHH---HHHHHHHHHhhcCcEEEEC
Confidence 5899987 9999999998888899 577778887766543 444433 2222222222 2222222112368999998
Q ss_pred cC
Q 022879 188 AG 189 (290)
Q Consensus 188 ~g 189 (290)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 352
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.90 E-value=0.13 Score=42.05 Aligned_cols=81 Identities=26% Similarity=0.374 Sum_probs=50.2
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
+.++||+|+ |.+|...+..+...|. .++.+++++++.+.+.. .+.. ..+..+- ..+++.+.++++.+ ...+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAA-EFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hcCC
Confidence 357999988 9999999998888899 58888887766544322 2221 1222221 22234343444432 2346
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 353
>PRK06484 short chain dehydrogenase; Validated
Probab=95.90 E-value=0.091 Score=48.19 Aligned_cols=82 Identities=27% Similarity=0.381 Sum_probs=53.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d 182 (290)
+++++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ ..++++... .+..+- ..+++.+.++++.+. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 5789999987 9999999999999999 5788878777654 345565322 222222 223333444443332 24799
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 354
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.15 Score=41.82 Aligned_cols=81 Identities=25% Similarity=0.316 Sum_probs=49.9
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
++++||+|+ |.+|...+..+...|+ .++.++++.++.+. .+.+... ..+..+-.+ +++...+.++.+.. +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 468999988 9999999988888898 57778787766543 3333211 122222222 22333333333222 4699
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999974
No 355
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.88 E-value=0.16 Score=41.20 Aligned_cols=82 Identities=21% Similarity=0.295 Sum_probs=51.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++.++||+|+ |.+|...++.+...|.+ ++.+.+++++.+.. +..+... .+..+-. ..++.+.++++.. .-.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVE-AFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HhC
Confidence 3568999998 99999999988888995 88888887664432 2234322 2111211 2233333333322 224
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+++++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999865
No 356
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.86 E-value=0.16 Score=41.27 Aligned_cols=82 Identities=22% Similarity=0.365 Sum_probs=50.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
.+.+++|.|+ |.+|...+..+...|+ .|+.+++++++.+.. ++ .+.. ..+..+-. ..++.+.+++..+ .-.
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 3578999987 9999999998888899 688888877654432 22 2221 12222221 2223333333322 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|.+|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999999874
No 357
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.86 E-value=0.19 Score=43.30 Aligned_cols=36 Identities=36% Similarity=0.491 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~ 142 (290)
...+|+|.|+|++|..+++.+...|...+..++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346899999999999999999999998888887763
No 358
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.17 Score=41.34 Aligned_cols=84 Identities=21% Similarity=0.329 Sum_probs=51.9
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC--EEE--ecCC-CcccHHHHHHHHH
Q 022879 105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD--NIV--KVST-NLQDIAEEVEKIQ 174 (290)
Q Consensus 105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~--~~~~-~~~~~~~~~~~~~ 174 (290)
..++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +..+.. .++ +.+. ...++.+.++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999987 9999999988888899 577888877654322 222321 122 2211 1223333333343
Q ss_pred HHhCCCccEEEEccCC
Q 022879 175 KAMGTGIDVSFDCAGL 190 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~ 190 (290)
+ ...++|.+|.+.|.
T Consensus 88 ~-~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 E-QFGRLDGVLHNAGL 102 (247)
T ss_pred H-HhCCCCEEEECCcc
Confidence 2 23479999998864
No 359
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.86 E-value=0.2 Score=42.69 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=61.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.+++|.|.|.|.+|...++.++.+|+ .+.+.+.+.++.+ +..... ...+ +.++. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence 67899999999999999999999999 5778776544321 111111 1112 33332 34799998
Q ss_pred ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKTM-----STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 214 (290)
+....+.. ...++.|+++..++.++...
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 88764322 24677899999999998654
No 360
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.11 Score=42.36 Aligned_cols=41 Identities=27% Similarity=0.268 Sum_probs=33.3
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE 150 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 150 (290)
.+++|+|+ |++|...+..+...|+ .|+.+++++++.+.+..
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 57899987 9999988888888899 58888888877765544
No 361
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.85 E-value=0.13 Score=42.46 Aligned_cols=82 Identities=21% Similarity=0.283 Sum_probs=48.2
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH-HHHHcCCCEEEecCC-CcccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVD---DYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~---~~~~~-~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~ 178 (290)
.++++||+|+ +++|.+.++.+...|++ ++.+... +++.+ +.++++....+..|- ..++..+.++...+. -
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-W 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-h
Confidence 4678999983 58999988888888995 6555432 23322 234445332232222 223344444444332 2
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 579999998874
No 362
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.83 E-value=0.5 Score=37.72 Aligned_cols=102 Identities=19% Similarity=0.131 Sum_probs=62.9
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHH
Q 022879 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ 174 (290)
Q Consensus 99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
+++...++++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++ ++...+..... +.... +
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~- 139 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---W- 139 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---C-
Confidence 34456788999999998755 55555566553 3 68999999877665543 34322111111 11000 0
Q ss_pred HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
.....||+|+-............+.|+++|+++..-
T Consensus 140 -~~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 140 -PAYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred -CcCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 012569998876555556667888999999987653
No 363
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.16 Score=42.12 Aligned_cols=79 Identities=25% Similarity=0.322 Sum_probs=47.4
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d 182 (290)
++||+|+ |++|...++.+...|. .|+.+++++++.+. .+ ..+... .+..+-.+ +++.+.+..+.. ...++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 6899988 9999999988888899 57777777665442 22 223221 22222212 222222222222 235799
Q ss_pred EEEEccCC
Q 022879 183 VSFDCAGL 190 (290)
Q Consensus 183 ~vid~~g~ 190 (290)
++|++.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999884
No 364
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.81 E-value=0.17 Score=41.43 Aligned_cols=79 Identities=25% Similarity=0.316 Sum_probs=50.0
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE-EEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
+++|+|+ |.+|...++.+...|+ .|+.+++++++.+.+.. ++... .+..+- ..+++.+.++++.+ ..+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA-EWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence 6899987 9999999999988999 58888888776654433 44321 222221 12233333333322 224699999
Q ss_pred EccCC
Q 022879 186 DCAGL 190 (290)
Q Consensus 186 d~~g~ 190 (290)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 365
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.096 Score=42.99 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=45.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.+++++|+|+ |++|...++.+...|+ .|+.+++++ +..+... .+....+..+-. +.. .+.+. -+++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~--~~~-~~~~~----~~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECG--KEE-SLDKQ----LASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCC--CHH-HHHHh----cCCCCEE
Confidence 3579999988 9999999998888999 577776665 2222211 111122222221 111 22221 2369999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|+++|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999975
No 366
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.14 Score=42.99 Aligned_cols=83 Identities=29% Similarity=0.361 Sum_probs=48.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh---------hHH-HHHHHc---CCC-EEEecCC-CcccHHHH
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---------YRL-SVAKEI---GAD-NIVKVST-NLQDIAEE 169 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~---------~~~-~~~~~l---g~~-~~~~~~~-~~~~~~~~ 169 (290)
-.++++||+|+ +++|.+.++.+...|++ ++.++.+. ++. +..+++ +.. ..+..+- +.++..+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 35789999987 99999999988888994 66665442 222 222322 322 1222222 22233333
Q ss_pred HHHHHHHhCCCccEEEEccCC
Q 022879 170 VEKIQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 170 ~~~~~~~~~~~~d~vid~~g~ 190 (290)
+++..+.. +.+|++|++.|.
T Consensus 83 ~~~~~~~~-g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETF-GGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhc-CCCCEEEECCCC
Confidence 44433322 469999999875
No 367
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.79 E-value=0.29 Score=41.85 Aligned_cols=90 Identities=22% Similarity=0.308 Sum_probs=61.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|+++.|.|.|.||++.++.++.+|+ .++.-+++.. .+..+.++...+ ++.+.++ ..|++.-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell~--------~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELLA--------ESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHHH--------hCCEEEE
Confidence 48899999999999999999999999 5777777665 333344444321 1222222 3577754
Q ss_pred -ccCCHHHH----HHHHHHhccCCEEEEeccCC
Q 022879 187 -CAGLNKTM----STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 -~~g~~~~~----~~~~~~l~~~G~~v~~g~~~ 214 (290)
|-..+++. ...++.|++++.+|..+...
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 44443322 24788899999999998654
No 368
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.79 E-value=0.23 Score=39.12 Aligned_cols=76 Identities=28% Similarity=0.396 Sum_probs=47.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
++.+++|.|+ |.+|...+..+...|. .++.++++.++.+.+ +.+ +.. +...+. .+.. .+.+.. .+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence 5689999987 9999988888888887 677778887765543 223 222 111111 1111 222221 35
Q ss_pred ccEEEEccCCH
Q 022879 181 IDVSFDCAGLN 191 (290)
Q Consensus 181 ~d~vid~~g~~ 191 (290)
.|+||.++..+
T Consensus 98 ~diVi~at~~g 108 (194)
T cd01078 98 ADVVFAAGAAG 108 (194)
T ss_pred CCEEEECCCCC
Confidence 89999998764
No 369
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.74 E-value=0.14 Score=44.89 Aligned_cols=73 Identities=23% Similarity=0.354 Sum_probs=54.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.+.++||.|+|-+|..++..+...|...++...++.++.. +++++++.. +.++ + +.+. -..+|+||
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~----e----l~~~----l~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALE----E----LLEA----LAEADVVI 243 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHH----H----HHHh----hhhCCEEE
Confidence 6789999999999999999999999888888888877755 678888443 2221 1 2211 14589999
Q ss_pred EccCCHH
Q 022879 186 DCAGLNK 192 (290)
Q Consensus 186 d~~g~~~ 192 (290)
-+++.+.
T Consensus 244 ssTsa~~ 250 (414)
T COG0373 244 SSTSAPH 250 (414)
T ss_pred EecCCCc
Confidence 9999854
No 370
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.73 E-value=0.19 Score=41.05 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
+.+|+|.|+|++|..+++.+...|.+.+..++.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999999888777554
No 371
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.73 E-value=0.35 Score=35.93 Aligned_cols=32 Identities=31% Similarity=0.545 Sum_probs=27.9
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
+|+|.|+|++|...++.+...|.+.+..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 58899999999999999999999888887654
No 372
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.72 E-value=0.17 Score=41.75 Aligned_cols=82 Identities=24% Similarity=0.248 Sum_probs=47.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
++.++||+|+ |.+|...++.+...|++ ++.+.+ +++..+ .. +..+.. ..+..+-. .++..+.++.+.+ ..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK-EF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-Hc
Confidence 5789999987 99999999999999995 555544 333322 22 223322 12222222 2222333333322 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 469999999885
No 373
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.72 E-value=0.17 Score=43.14 Aligned_cols=81 Identities=25% Similarity=0.377 Sum_probs=49.9
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHHH-HHHHcCC--C--EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLS-VAKEIGA--D--NIVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~-~~~~lg~--~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
+.++||+|+ +++|.+.++.+...| . .|+.+.+++++.+ ..+++.. . ..+..+-. .++..+.+.++.+ ...
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence 568999988 999999888888889 7 5777777776554 3344431 1 12222221 2233333444322 235
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 374
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.18 Score=41.54 Aligned_cols=79 Identities=27% Similarity=0.351 Sum_probs=50.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +++ +.. ..+..+-. + .+.++++.+.. .
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS--S-PEAREQLAAEA-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC--C-HHHHHHHHHHh-C
Confidence 4689999988 9999999998888999 688888877665432 222 221 22222221 1 12233333222 4
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 375
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.70 E-value=0.12 Score=45.60 Aligned_cols=76 Identities=13% Similarity=0.245 Sum_probs=46.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-CEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
.+++++|+|+ |++|.+.++.+...|+ .++++++++++.+.. ..... ...+..+-. +. +.+.+. -+++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d~-~~v~~~----l~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--QE-AALAEL----LEKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--CH-HHHHHH----hCCCCE
Confidence 4789999988 9999999998888899 577777776654322 11111 112222211 11 223332 136999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9998874
No 376
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.69 E-value=0.15 Score=41.55 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=47.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HH---HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA---KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 181 (290)
+++||+|+ |.+|...++.+...|++.++...+++++.+ .. +..+.. ..+..+-.+ ++..+.++++.+ ...++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence 47899988 999999999888889953333445554432 22 223322 222222222 233333343332 34679
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|.+.|.
T Consensus 81 d~vi~~ag~ 89 (247)
T PRK09730 81 AALVNNAGI 89 (247)
T ss_pred CEEEECCCC
Confidence 999999985
No 377
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.67 E-value=0.17 Score=41.27 Aligned_cols=82 Identities=22% Similarity=0.264 Sum_probs=47.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (290)
+++++||+|+ |.+|...++.+...|++ ++.+ .+++++.+ ..+. .+.. ..+..+-.+ +.+.+.+++... .-
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN-HF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-Hc
Confidence 3689999987 99999999988888995 5444 33444332 2222 2322 223222222 233333333322 22
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
..+|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 468999999875
No 378
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.67 E-value=0.15 Score=41.62 Aligned_cols=81 Identities=26% Similarity=0.238 Sum_probs=46.1
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 181 (290)
+++||+|+ |++|...++.+...|++.++...+++++.+.+ +..+.. ..+..+- ...++.+.++++.+. -.++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence 57999988 99999999988888995333344554443322 223322 1222222 122333333333222 2469
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06947 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCcc
Confidence 999999873
No 379
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.64 E-value=0.12 Score=46.88 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=52.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----cCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
.|++|||+|+ |++|...+.-....+.+.++..+.++.++..++. ++......+=.+-.|.. .+.++. .+.+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~-~~~~~~--~~~k 325 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRD-RVERAM--EGHK 325 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHH-HHHHHH--hcCC
Confidence 5899999987 9999887776667799899999999988765532 33222221112222322 233332 3557
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|+||+++.-
T Consensus 326 vd~VfHAAA~ 335 (588)
T COG1086 326 VDIVFHAAAL 335 (588)
T ss_pred CceEEEhhhh
Confidence 9999998753
No 380
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.64 E-value=0.31 Score=40.46 Aligned_cols=106 Identities=17% Similarity=0.210 Sum_probs=67.1
Q ss_pred HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHH
Q 022879 98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++...++.++.+||=.|+|. |..+..+++..++ .+++++.+++..+.+++... ...+.+.. .+.. +. ..
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~ 113 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF 113 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence 345557788999999988754 5566777777777 69999999988887766321 11111100 1110 00 01
Q ss_pred hCCCccEEEEcc-----C---CHHHHHHHHHHhccCCEEEEecc
Q 022879 177 MGTGIDVSFDCA-----G---LNKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 177 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
....||+|+..- + ....+..+.+.|+|+|+++....
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 235699998621 1 12466778899999999998754
No 381
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.62 E-value=0.29 Score=40.42 Aligned_cols=97 Identities=23% Similarity=0.290 Sum_probs=66.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
+......++++||=.|+|. |..+..+++.. +. .+++++.++...+.+++.+.+.+ . .+. .++. ..
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~~ 87 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--PK 87 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--CC
Confidence 4445667889999998866 67777888775 45 79999999999888877554322 1 121 1121 23
Q ss_pred CCccEEEEccC-----C-HHHHHHHHHHhccCCEEEEe
Q 022879 179 TGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 179 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~ 210 (290)
..||+|+-... . ...+..+.+.|+|+|.++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 57999987542 1 34567788999999999865
No 382
>PRK09135 pteridine reductase; Provisional
Probab=95.62 E-value=0.22 Score=40.54 Aligned_cols=82 Identities=16% Similarity=0.097 Sum_probs=47.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH-H---HcCC--CEEEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-K---EIGA--DNIVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~-~---~lg~--~~~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.+.++||+|+ |.+|..+++.+...|+ .++.++++ +++.+.+ + .... ...+..+-. .+++.+.++++.+ .
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA-A 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence 4578999988 9999999998888899 57777654 3333322 1 2211 112222222 2223333333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-.++|++|++.|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 3468999999983
No 383
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.60 E-value=0.29 Score=39.88 Aligned_cols=105 Identities=21% Similarity=0.236 Sum_probs=66.5
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
.+..++++||-.|.|. |..++.+++.++ ...+++++.+++..+.+++ .|...-+.+ ...+..+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~--~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--IQSDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEccHHHHHHHHHhCC
Confidence 4566788999888744 667777777753 3479999999988777654 443322221 1234444444432211
Q ss_pred -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879 178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 210 (290)
...||+||-.... ...+..+++.++++|.++.-
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3579999765432 34567788999999988753
No 384
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.59 E-value=0.56 Score=37.56 Aligned_cols=103 Identities=21% Similarity=0.324 Sum_probs=70.4
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEE-ecCCCcccHHHHHHHHHHH
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIV-KVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~-~~~~~~~~~~~~~~~~~~~ 176 (290)
++..+.++||=.|.+ +|..++.+|..+. -.++++++.++++.+.+++ .|....+ .... .+..+.+.+ .
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~--gdal~~l~~---~ 128 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG--GDALDVLSR---L 128 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec--CcHHHHHHh---c
Confidence 456688888888764 4888889999886 3379999999999887754 5644422 2211 244444433 2
Q ss_pred hCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879 177 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 177 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 211 (290)
....||+||--... +..+..+++.|+++|-++.=.
T Consensus 129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 129 LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 34689999654332 357888999999999988654
No 385
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.58 E-value=0.83 Score=36.77 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=54.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
++.+|||.|+|.++.-=++.+...|++ |.+++.. ++-.++. ..+.-..+. .++.. .+ -.++++|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~-~~~~i~~~~-----r~~~~--~d-----l~g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLK-KYGNLKLIK-----GNYDK--EF-----IKDKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHH-hCCCEEEEe-----CCCCh--HH-----hCCCcEE
Confidence 577999999999998878888888994 6666333 2222222 223222222 11111 11 1468999
Q ss_pred EEccCCHHHHHHHHHHhccCCEEEEec
Q 022879 185 FDCAGLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 185 id~~g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
|-|++.++.-.......+..+.++...
T Consensus 90 iaATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 90 VIATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 999997654445555555667776654
No 386
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.58 E-value=0.24 Score=38.29 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=28.7
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~ 142 (290)
+|+|.|+|++|...++.+...|...+..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999998788887664
No 387
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.58 E-value=0.41 Score=39.69 Aligned_cols=101 Identities=19% Similarity=0.230 Sum_probs=65.5
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcC-------CCE--EEecCCCcccHHHHHHH
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIG-------ADN--IVKVSTNLQDIAEEVEK 172 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~--~~~~~~~~~~~~~~~~~ 172 (290)
..++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++-. ... .+. ....+
T Consensus 69 ~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~--~d~~~------- 138 (261)
T PLN02233 69 SGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIE--GDATD------- 138 (261)
T ss_pred hCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEE--ccccc-------
Confidence 5678899999998765 5577778877653 27999999999888775421 111 111 11111
Q ss_pred HHHHhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCC
Q 022879 173 IQKAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
+ ....+.||.|+-..+- ...+.++.+.|+|+|+++.+....
T Consensus 139 l-p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 139 L-PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred C-CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 1 0123469999754321 346788999999999998876443
No 388
>PRK03612 spermidine synthase; Provisional
Probab=95.57 E-value=0.2 Score=46.02 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=63.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----------CCEEEecCCCcccHHHHHHHH
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-----------ADNIVKVSTNLQDIAEEVEKI 173 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.+++++||+.|+|. |..+.++++.-+.+++++++-+++-.+.+++.. ...+ .. ...|..+.+
T Consensus 295 ~~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~v--i~~Da~~~l--- 367 (521)
T PRK03612 295 SARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TV--VNDDAFNWL--- 367 (521)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EE--EEChHHHHH---
Confidence 45678999998764 666677777645458999999999999887721 0111 10 012222222
Q ss_pred HHHhCCCccEEEEccCCH-----------HHHHHHHHHhccCCEEEEec
Q 022879 174 QKAMGTGIDVSFDCAGLN-----------KTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 174 ~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g 211 (290)
....++||+|+-....+ +.++.+.+.|+++|.++.-.
T Consensus 368 -~~~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 368 -RKLAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred -HhCCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 22346899997644321 24567888999999988653
No 389
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.55 E-value=0.14 Score=42.76 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=52.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-----HcCC-C--EEEecCCCcccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-----EIGA-D--NIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-----~lg~-~--~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
-|++.+|+|+ .++|.+-+.-+...|. .|+.++++++|++.++ +.++ . .++|+...++++.+-.+++ .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l---~ 123 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL---A 123 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh---c
Confidence 4688999998 8999765554444899 5999999999987663 2331 2 3445444433344333333 4
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
+-.+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5567788999885
No 390
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.12 Score=41.84 Aligned_cols=74 Identities=18% Similarity=0.337 Sum_probs=47.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
++++||+|+ |.+|...++.+...|. .|+.++++.++ .+.. .++..+- ..++..+.+.++.+ ..+.|++|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence 578999988 9999999998888998 57777776554 1121 2222222 22233333444432 23689999
Q ss_pred EccCC
Q 022879 186 DCAGL 190 (290)
Q Consensus 186 d~~g~ 190 (290)
++.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 99874
No 391
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.55 E-value=0.22 Score=40.45 Aligned_cols=82 Identities=21% Similarity=0.273 Sum_probs=46.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHH-HHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS-VAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.+.++||+|+ |.+|...+..+...|++ |+++.++ +++.+ ..+ ..+.. ..+..+-. .+++.+.++++.+ .-
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA-EF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence 3568999988 99999999999889995 5444443 32222 222 22322 12221222 2223333333322 22
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
.++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 468999999874
No 392
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.54 E-value=0.1 Score=41.22 Aligned_cols=97 Identities=19% Similarity=0.260 Sum_probs=60.6
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
....++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++. +...+. ....++. ++ ...
T Consensus 26 l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~---~~~~d~~----~~--~~~ 93 (197)
T PRK11207 26 VKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH---TAVVDLN----NL--TFD 93 (197)
T ss_pred cccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce---EEecChh----hC--CcC
Confidence 3455678999998866 7777888875 77 799999999877766542 221111 0011211 11 113
Q ss_pred CCccEEEEccCC--------HHHHHHHHHHhccCCEEEEec
Q 022879 179 TGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 179 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 211 (290)
..||+|+.+..- ...+..+.+.|+++|.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 469999875331 235667888899999965543
No 393
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.22 Score=40.40 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=46.8
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
..++||+|+ |.+|...++.+...|.+.++.+.++++..+.+ +..+.. ..+..+-. .+++.+.+.++.+ .-.+
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~ 84 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE-RFGR 84 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH-HcCC
Confidence 468999988 99999999998888995444444444433322 222322 22222222 2233333333322 2247
Q ss_pred ccEEEEccC
Q 022879 181 IDVSFDCAG 189 (290)
Q Consensus 181 ~d~vid~~g 189 (290)
+|.+|.+.|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 999999887
No 394
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.54 E-value=0.18 Score=41.21 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=47.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 183 (290)
+++++||+|+ |.+|...++.+...|+ .++.++++. .+..+.. ..+..+-. .+++.+.++++.+ ...++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4678999988 9999999998888899 577776665 1222211 12222222 2233333444332 2356999
Q ss_pred EEEccCC
Q 022879 184 SFDCAGL 190 (290)
Q Consensus 184 vid~~g~ 190 (290)
+|++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999875
No 395
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.52 E-value=0.11 Score=42.97 Aligned_cols=78 Identities=21% Similarity=0.230 Sum_probs=47.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
.++++||+|+ |++|.+.++.+...|+ .++.++.++++.+. ... ..+..+- ..+++.+.++++.+ .-+++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~-~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENY-QFVPTDVSSAEEVNHTVAEIIE-KFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---Cce-EEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 4678999987 9999999999988999 57777666554321 111 1222222 12233333333322 22479999
Q ss_pred EEccCC
Q 022879 185 FDCAGL 190 (290)
Q Consensus 185 id~~g~ 190 (290)
|++.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 999874
No 396
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.52 E-value=0.1 Score=44.03 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~ 142 (290)
.+++++|.|+|++|.+++..+...|++.++++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999998888889997688888875
No 397
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.52 E-value=0.21 Score=38.91 Aligned_cols=81 Identities=21% Similarity=0.395 Sum_probs=52.2
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCC--CE-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGA--DN-IVKVSTN-LQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d 182 (290)
...+|.|+ +++|.+..|++...|++ +++.+.+. +..+.++.|+. ++ .+..+-+ ..+....++++.+.- +.++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps 92 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS 92 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence 45677776 99999999999999995 66665544 45566777775 22 2222222 223333355554433 4799
Q ss_pred EEEEccCCH
Q 022879 183 VSFDCAGLN 191 (290)
Q Consensus 183 ~vid~~g~~ 191 (290)
++++|.|..
T Consensus 93 vlVncAGIt 101 (256)
T KOG1200|consen 93 VLVNCAGIT 101 (256)
T ss_pred EEEEcCccc
Confidence 999999873
No 398
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.51 E-value=0.19 Score=41.52 Aligned_cols=82 Identities=17% Similarity=0.221 Sum_probs=46.2
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHHc-CCCEEEecCCC-cccHHHHHHHHHH
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVD------DYRLSVAKEI-GADNIVKVSTN-LQDIAEEVEKIQK 175 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~l-g~~~~~~~~~~-~~~~~~~~~~~~~ 175 (290)
.+++++|+|+ +++|.+.++.+...|++ |+.+..+ ++..+.+++. +....+..|-. .++..+.+++..+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4678999986 48999999988889995 5555322 2222222222 21122222222 2233333444333
Q ss_pred HhCCCccEEEEccCC
Q 022879 176 AMGTGIDVSFDCAGL 190 (290)
Q Consensus 176 ~~~~~~d~vid~~g~ 190 (290)
. .+.+|+++++.|.
T Consensus 84 ~-~g~iD~lv~nag~ 97 (258)
T PRK07370 84 K-WGKLDILVHCLAF 97 (258)
T ss_pred H-cCCCCEEEEcccc
Confidence 2 2479999999873
No 399
>PLN02244 tocopherol O-methyltransferase
Probab=95.50 E-value=0.39 Score=41.55 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=62.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
+++++||=.|+|. |..+..+++..|+ .+++++.++...+.+++. +...-+.+.. .+.. ++ ....+.|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~----~~-~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADAL----NQ-PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCcc----cC-CCCCCCc
Confidence 6788998888765 6677788887788 699999999877766542 3211111100 1110 00 0123579
Q ss_pred cEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879 182 DVSFDCAGL------NKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 182 d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
|+|+..-.. ...+..+.+.|+|+|+++....
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 999864321 2467788999999999988653
No 400
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.49 E-value=0.42 Score=37.85 Aligned_cols=35 Identities=26% Similarity=0.465 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|...++.+...|...++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 44789999999999999999999999878888776
No 401
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.24 Score=40.80 Aligned_cols=82 Identities=16% Similarity=0.308 Sum_probs=48.4
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD--YR-LSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 178 (290)
.+++++|+|+ +++|.+.++.+...|+ .|+.++++. +. .+..++++.. ..+..+-. .++..+.+++..+ ..
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVRE-HV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHH-Hc
Confidence 4678999985 7999999998888999 577765442 32 2333444421 12222222 2233333333322 23
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 579999998874
No 402
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.48 E-value=0.24 Score=40.37 Aligned_cols=81 Identities=20% Similarity=0.261 Sum_probs=47.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEE-EeCCh-hHHHHHH---HcCCCEE-EecCCC-cccHHHHHHHHHHHhCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVI-VDVDD-YRLSVAK---EIGADNI-VKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~-v~~~~-~~~~~~~---~lg~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
++++||+|+ |.+|...++.+...|++ ++. ..+++ ...+.++ ..+.... +..+-. .++..+.+++..+. .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFK-VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 578899987 99999999999999995 444 33333 3333333 2343321 122221 22333333333332 35
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++++.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 403
>PLN03075 nicotianamine synthase; Provisional
Probab=95.48 E-value=0.13 Score=43.13 Aligned_cols=99 Identities=21% Similarity=0.259 Sum_probs=66.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcC-C----CEEEecCCCcccHHHHHHHHHHHhCC
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIG-A----DNIVKVSTNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
.++++|+-.|.|+.+..++-+++.... ..+++++.+++..+.++++- . ..-+.+.. .+..+ .. ....
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~-~~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VT-ESLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----cc-cccC
Confidence 378999999999889888888865533 37999999999888887643 1 11122211 22211 10 0125
Q ss_pred CccEEEEcc-------CCHHHHHHHHHHhccCCEEEEec
Q 022879 180 GIDVSFDCA-------GLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 180 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
+||+||-.+ .....+..+.+.|+++|.++.=.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799998765 22346788999999999988654
No 404
>PRK08328 hypothetical protein; Provisional
Probab=95.48 E-value=0.27 Score=39.99 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
.+.+|+|.|+|++|..+++.+...|.+.+..++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999988888643
No 405
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.47 E-value=0.26 Score=42.89 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~ 142 (290)
...+|||.|+|++|..+++.+...|.+.+..++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 447999999999999999999999999888886653
No 406
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.24 Score=40.28 Aligned_cols=81 Identities=28% Similarity=0.360 Sum_probs=47.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
+.++||.|+ |.+|...+..+...|++ ++.+ ++++++.+.+ .. .+.. .++..+-.+ +++.+.+..+.. ...
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE-KFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence 468999988 99999998887788995 6666 7776654332 22 2221 122222222 223233333322 123
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 407
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.27 Score=41.36 Aligned_cols=83 Identities=19% Similarity=0.186 Sum_probs=47.9
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-HHH----HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHh
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAM 177 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~----~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~ 177 (290)
-++.++||+|+ |.+|...++.+...|+ .|+.+.+++. ..+ .++..+... .+..+-.+ +++.+.++++...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~- 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE- 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 34679999988 9999999998888899 4666655532 111 222223221 22222222 2233333333222
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
..++|++|++.|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 2469999998874
No 408
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.47 E-value=0.29 Score=40.15 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|..++..+...|...+..++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45799999999999999999999999888777543
No 409
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.47 E-value=0.24 Score=42.12 Aligned_cols=98 Identities=15% Similarity=0.113 Sum_probs=64.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
-....+++|.|+|..|.+.++.+. ..+.+.+.+.++++++.+ +++.+....+ ... ..+..+.+ ...|
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av--------~~aD 190 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP--------EAVD 190 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------hcCC
Confidence 356679999999999988888775 478878888889887755 4444432110 000 12232222 3689
Q ss_pred EEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879 183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
+|+.|+.++..+-.. .++++-.+..+|....
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAGRLVVAVGAFTP 221 (304)
T ss_pred EEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence 999999886544333 3788888888886543
No 410
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.37 Score=40.39 Aligned_cols=58 Identities=21% Similarity=0.393 Sum_probs=45.2
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEe
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVK 158 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~ 158 (290)
+...+++|.+|+=--+|+.|.+.+.+|+.+|++.++++ .-+.+|..+++.+|+.-+..
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 34668999965554459999999999999999755555 45678999999999886654
No 411
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.46 E-value=0.1 Score=43.12 Aligned_cols=96 Identities=21% Similarity=0.274 Sum_probs=61.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
.++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++. +.. .+.... .+. .++.......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~----~~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAA----QDIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCH----HHHhhhcCCC
Confidence 4567888888766 7778888875 76 699999999988877652 211 111111 121 1111112457
Q ss_pred ccEEEEccC-----C-HHHHHHHHHHhccCCEEEEec
Q 022879 181 IDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 181 ~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 211 (290)
||+|+.... . ...+..+.+.|+|+|.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 999985422 1 245778899999999998653
No 412
>PRK05855 short chain dehydrogenase; Validated
Probab=95.45 E-value=0.18 Score=46.69 Aligned_cols=82 Identities=24% Similarity=0.273 Sum_probs=51.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 179 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (290)
.+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +..|.. ..+..+-.+ ++..+.+.++.+ ..+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence 4578999988 9999999988888999 588888887665433 223322 222222222 223333333322 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999885
No 413
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=95.45 E-value=0.55 Score=37.64 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=70.3
Q ss_pred CCCCeEEEEC--C-CHHHHHHHHHHHHCCCCeEEEEeCChh---H-HHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHh
Q 022879 106 GPETNVLIMG--A-GPIGLVTMLAARAFGAPRIVIVDVDDY---R-LSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAM 177 (290)
Q Consensus 106 ~~~~~vlI~G--a-g~vG~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (290)
-.|++.||.| . .+++.-.++.++..|++ +..+--.++ + .+++++++.+.++..+-.++ +..+...++ +..
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i-~~~ 81 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI-KKK 81 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH-HHh
Confidence 4689999997 3 78999999999999996 444433332 2 34566788777776554333 333333333 334
Q ss_pred CCCccEEEEccCCHH-----------------------------HHHHHHHHhccCCEEEEeccCCC
Q 022879 178 GTGIDVSFDCAGLNK-----------------------------TMSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 178 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
-+++|.++.+++-.. ....+...|.++|.++.+...+.
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs 148 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS 148 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence 568999999886521 22335567788999998875543
No 414
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.19 Score=41.28 Aligned_cols=82 Identities=16% Similarity=0.162 Sum_probs=45.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC----hhH-HHHHH---HcCCC-EEEecCCC-cccHHHHHHHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----DYR-LSVAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQK 175 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~----~~~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~ 175 (290)
.+.++||+|+ |++|...++.+...|++ ++.+..+ .++ .+..+ ..+.. ..+..+-. .++..+.+.+..+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~-vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAK-AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCc-EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 4678999987 99999999998888996 4444321 122 22222 23322 12222221 2223333333322
Q ss_pred HhCCCccEEEEccCC
Q 022879 176 AMGTGIDVSFDCAGL 190 (290)
Q Consensus 176 ~~~~~~d~vid~~g~ 190 (290)
..+++|++|++.|.
T Consensus 86 -~~~~id~li~~ag~ 99 (257)
T PRK12744 86 -AFGRPDIAINTVGK 99 (257)
T ss_pred -hhCCCCEEEECCcc
Confidence 22479999999985
No 415
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.43 E-value=0.28 Score=40.14 Aligned_cols=80 Identities=19% Similarity=0.268 Sum_probs=48.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 181 (290)
++++|+|+ |.+|...++.+...|+ .++.+.+++++.+ ..+ ..+.. ..+..+-. .++..+.+.++.+. ..++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence 36899987 9999999998888999 5777777765443 222 22322 12222222 22333334444332 2468
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999875
No 416
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.43 E-value=0.17 Score=42.53 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~ 142 (290)
.++++||.|+|+.+.+++..+...|++.+.++.+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999988898877777778998888888884
No 417
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.24 Score=41.20 Aligned_cols=82 Identities=26% Similarity=0.321 Sum_probs=48.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-------H-HH---HHHcCCC-EEEecCC-CcccHHHHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-------L-SV---AKEIGAD-NIVKVST-NLQDIAEEVEK 172 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-------~-~~---~~~lg~~-~~~~~~~-~~~~~~~~~~~ 172 (290)
++.++||+|+ |++|...++.+...|+ .++.++++.++ . +. ++..+.. ..+..+- ..++..+.+++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4578999988 9999999998888899 57777665432 1 11 2223322 1222221 22233333333
Q ss_pred HHHHhCCCccEEEEccCC
Q 022879 173 IQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 173 ~~~~~~~~~d~vid~~g~ 190 (290)
+.+.. +.+|++|++.|.
T Consensus 84 ~~~~~-g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERF-GGIDICVNNASA 100 (273)
T ss_pred HHHHh-CCCCEEEECCCC
Confidence 32222 369999999875
No 418
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.40 E-value=0.077 Score=43.15 Aligned_cols=105 Identities=25% Similarity=0.337 Sum_probs=62.4
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
....++|++||=.|+|. |..+..+++..+.+ .|++++-+++-++.+++ .+...+.-...+.+++. .
T Consensus 42 ~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp--------~ 112 (233)
T PF01209_consen 42 LLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP--------F 112 (233)
T ss_dssp HHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----------S
T ss_pred ccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc--------C
Confidence 35678899999987755 67788888887642 79999999998887764 22221111112222211 1
Q ss_pred hCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCCC
Q 022879 177 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHH 215 (290)
Q Consensus 177 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~ 215 (290)
.++.||+|.-+.|- ...+.++.+.|+|+|+++.+.....
T Consensus 113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p 157 (233)
T PF01209_consen 113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKP 157 (233)
T ss_dssp -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-
T ss_pred CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCC
Confidence 24569999876654 2468889999999999998875443
No 419
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.38 E-value=0.17 Score=39.48 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=57.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
++.+||=.|+|+ |..++.+++......+++++.+++..+.++ +.+...+.... .+.. ++ .....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~---~d~~----~~--~~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN---GRAE----DF--QHEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe---cchh----hc--cccCCcc
Confidence 378888888755 566666666554347999999998766553 34533221111 1211 11 1235799
Q ss_pred EEEEccC--CHHHHHHHHHHhccCCEEEEe
Q 022879 183 VSFDCAG--LNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 183 ~vid~~g--~~~~~~~~~~~l~~~G~~v~~ 210 (290)
+|+-..- -+..+..+.+.|+++|+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 9976531 134566678889999999876
No 420
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.38 E-value=0.63 Score=32.99 Aligned_cols=92 Identities=17% Similarity=0.156 Sum_probs=60.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 190 (290)
|+|.|.|.+|...++.++..+. .+++++.++++.+.++..+.. ++.-+..+.+ .+++ .+-...+.++-+++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~---~l~~---a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDPE---VLER---AGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSHH---HHHH---TTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhhh---HHhh---cCccccCEEEEccCC
Confidence 5788999999999999999665 799999999999999888844 4433332222 2322 244578889888886
Q ss_pred HHHHHH---HHHHhccCCEEEEe
Q 022879 191 NKTMST---ALGATCAGGKVCLV 210 (290)
Q Consensus 191 ~~~~~~---~~~~l~~~G~~v~~ 210 (290)
+..-.. .++.+.+..+++..
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE
Confidence 432222 33334455566544
No 421
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.36 E-value=0.42 Score=38.27 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=61.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEE------e-cCCCccc-HHHHHHHHHHH
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIV------K-VSTNLQD-IAEEVEKIQKA 176 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~------~-~~~~~~~-~~~~~~~~~~~ 176 (290)
.++.++|+.|+|. |.-++-||. .|. .|++++.++...+.+ ++-+..... . +....-+ +...+.++...
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5778999998876 778888875 699 699999999888764 222211000 0 0000000 00001001000
Q ss_pred hCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEecc
Q 022879 177 MGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 177 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
....||.|+|+..- +..+..+.+.|+|+|++...+.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 12458999996531 2356788899999998777654
No 422
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.34 E-value=0.4 Score=38.87 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~ 140 (290)
..+|+|.|+|++|..++..+...|...+..++.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 579999999999999999999999988877743
No 423
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.32 E-value=0.58 Score=36.55 Aligned_cols=99 Identities=21% Similarity=0.336 Sum_probs=62.2
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
....+.++.+||=.|+|. |..++.+++......+++++.+++..+.+++ ++...+-.. . .+... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~-~--~d~~~---~---- 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDII-P--GEAPI---E---- 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEE-e--cCchh---h----
Confidence 334567888988888765 6677777776543379999999987776643 332222111 1 11111 1
Q ss_pred hCCCccEEEEccC---CHHHHHHHHHHhccCCEEEEe
Q 022879 177 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 177 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~ 210 (290)
....+|+|+.... ....+..+.+.|+++|+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 1246999986432 124567788999999998764
No 424
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.32 E-value=0.16 Score=41.23 Aligned_cols=80 Identities=24% Similarity=0.272 Sum_probs=46.1
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HHHHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
+++||+|+ |.+|...++.+...|+ .++++.+ ++++.+ ...++ +.. ..+..+-. .+++.+.++++.+ ...+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA-ELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH-HcCC
Confidence 46899987 9999999999988999 4666555 443332 22222 211 12222222 2223333333332 2356
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 9999999874
No 425
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.31 E-value=0.2 Score=36.83 Aligned_cols=95 Identities=22% Similarity=0.295 Sum_probs=55.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-------------------hHHHH----HHHcC-CCEEEecCCCc
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-------------------YRLSV----AKEIG-ADNIVKVSTNL 163 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~~~~----~~~lg-~~~~~~~~~~~ 163 (290)
..+|+|.|+|++|...+..+...|...+..++.+. .|.+. ++++. ...+..+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 46899999999999999998888998888775432 12222 22232 22222221
Q ss_pred ccH-HHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEE
Q 022879 164 QDI-AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL 209 (290)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 209 (290)
..+ .+...++. .++|+||+|+...+....+.+.+...+.-..
T Consensus 79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i 121 (135)
T PF00899_consen 79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFI 121 (135)
T ss_dssp SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEE
T ss_pred cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence 122 12233332 3689999999985554455555555554433
No 426
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.29 E-value=1.1 Score=37.33 Aligned_cols=99 Identities=22% Similarity=0.229 Sum_probs=60.5
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
..++++++||=.|+|+ |..++.+++.++ ...+++++.++++.+.++ .+|...+..... |.. .+.. .
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~-~~~~----~ 137 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGR-VFGA----A 137 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHH-Hhhh----h
Confidence 4678899988887755 545556666553 236999999999987664 456543322211 211 1111 1
Q ss_pred CCCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCEEEEe
Q 022879 178 GTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 178 ~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 210 (290)
...||.|+- |+|. .+.+..+++.++++|+++..
T Consensus 138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 235998864 3442 12566788899999998754
No 427
>PLN02476 O-methyltransferase
Probab=95.28 E-value=0.54 Score=39.23 Aligned_cols=105 Identities=21% Similarity=0.233 Sum_probs=67.8
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
.+..+.++||-.|.+. |..++.+++.++.. .+++++.+++..+.++ +.|..+-+.+ ...+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~l--i~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV--KHGLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcc
Confidence 4566788999988743 77777888876422 6899999998877774 3554422221 1234444555443211
Q ss_pred -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879 178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 210 (290)
...||.||--... ...+..+++.|+++|.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3579999665443 23567788899999998754
No 428
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.27 E-value=0.64 Score=35.44 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=58.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879 109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 188 (290)
Q Consensus 109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 188 (290)
.+|.+.|.|.+|...++-+...|. .+.+.++++++.+.+.+.|+... .+..+.++ ..|+||-|+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~--------~~dvvi~~v 65 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAE--------QADVVILCV 65 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHH--------HBSEEEE-S
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhh--------cccceEeec
Confidence 368888999999999988888899 68889999999888877774322 12222221 258999999
Q ss_pred CCHHHHHHHHH------HhccCCEEEEeccCCC
Q 022879 189 GLNKTMSTALG------ATCAGGKVCLVGMGHH 215 (290)
Q Consensus 189 g~~~~~~~~~~------~l~~~G~~v~~g~~~~ 215 (290)
.........+. .+.++..++.++....
T Consensus 66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p 98 (163)
T PF03446_consen 66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISP 98 (163)
T ss_dssp SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--H
T ss_pred ccchhhhhhhhhhHHhhccccceEEEecCCcch
Confidence 87655555433 3455667777765543
No 429
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.27 E-value=0.28 Score=41.04 Aligned_cols=83 Identities=18% Similarity=0.228 Sum_probs=57.2
Q ss_pred HHHhcCC-CCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879 99 ACRRANI-GPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 99 ~l~~~~~-~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++...+ -.|.+++|.|.|. +|.-++.++...|+. |.+..+.. .++.+.+
T Consensus 148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~~~~------ 199 (286)
T PRK14175 148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMASYL------ 199 (286)
T ss_pred HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHHHHH------
Confidence 3444332 4789999999855 999999999999994 55543321 1222221
Q ss_pred hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+..|+||.++|.+..+.. +.++++..++.+|..
T Consensus 200 --~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 200 --KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred --hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 358999999998655554 458888888888854
No 430
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.26 E-value=0.24 Score=47.03 Aligned_cols=82 Identities=23% Similarity=0.342 Sum_probs=51.4
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCE--EEecCCC-cccHHHHHHHHHHHh
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGADN--IVKVSTN-LQDIAEEVEKIQKAM 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~--~~~~~~~-~~~~~~~~~~~~~~~ 177 (290)
.++++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +. .+... .+..+-. .+++.+.+.+... .
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~-~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL-A 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 4688999987 9999999998888899 578888877665433 22 23211 2222221 2233333333322 2
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
-+++|++|++.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 3479999999985
No 431
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.24 Score=40.31 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=47.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
.+++|+|+ |++|...++.+...|+ .|+++++++++.+.+ +.+ +.. ..+..+-.+. +.++++.+.....+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDT---ASHAAFLDSLPALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh---HHHHHHHHHHhhcC
Confidence 47899987 9999999998888899 588888887665432 221 111 2222221111 22333322223357
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++.+.|.
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999998764
No 432
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.3 Score=40.71 Aligned_cols=79 Identities=20% Similarity=0.329 Sum_probs=47.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 181 (290)
+++++|+|+|++|...++.+. .|. .|+.+++++++.+.+ +++ +.. ..+..+-.+ ++..+.+++. +. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence 357888999999999988875 788 577777876654422 222 322 222222222 2333333333 21 2469
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|++|++.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999985
No 433
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.25 E-value=0.14 Score=46.34 Aligned_cols=77 Identities=22% Similarity=0.344 Sum_probs=52.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh---------------------hHHHHHHHcCCCEEEecCCCccc
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD---------------------YRLSVAKEIGADNIVKVSTNLQD 165 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~ 165 (290)
.+++|+|.|+|+.|+.++..++..|.+ ++..+..+ ...+.++.+|.+..++..- ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 578999999999999999999999994 77776543 2456677888765433111 111
Q ss_pred HHHHHHHHHHHhCCCccEEEEccCCH
Q 022879 166 IAEEVEKIQKAMGTGIDVSFDCAGLN 191 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~vid~~g~~ 191 (290)
+ .+.++. ..+|.||.++|..
T Consensus 218 ~--~~~~~~----~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL----EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH----hcCCEEEEEeCCC
Confidence 1 122221 3599999999974
No 434
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.28 Score=39.93 Aligned_cols=81 Identities=20% Similarity=0.254 Sum_probs=46.6
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH----HHHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 179 (290)
+.++||+|+ |.+|...++.+...|+. ++.+. +++++.+. ++..+... .+..+-. .+++.+.+.++.+. ..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence 457999987 99999999888888985 44443 44433322 23334321 2222221 22333333333322 24
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|++|++.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06123 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 69999999875
No 435
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.23 E-value=0.31 Score=42.76 Aligned_cols=35 Identities=40% Similarity=0.511 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
.+.+|+|.|+|++|..++..+...|.+.+..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999988888776
No 436
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.23 E-value=0.7 Score=33.47 Aligned_cols=92 Identities=22% Similarity=0.215 Sum_probs=52.1
Q ss_pred eEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCChh---HHHHHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 110 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDY---RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
+|.|+|+ |-+|...++.+.. -+.+.+-++++++. ..+.-+..+.. .+.. ..+ ++++. ...|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v----~~~----l~~~~----~~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV----TDD----LEELL----EEAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE----BS-----HHHHT----TH-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc----chh----HHHhc----ccCC
Confidence 6899999 9999999999988 68865556666551 11111112211 1111 112 33321 2288
Q ss_pred EEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879 183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
++||.+. ++.....++.+...|.-+..|..+
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence 9999985 566666666666667777777544
No 437
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.22 E-value=0.47 Score=39.74 Aligned_cols=89 Identities=22% Similarity=0.276 Sum_probs=55.4
Q ss_pred eEEEECCCHHHHHH-HHHHHHCCCCeEEEEeCChhH--HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 110 NVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 110 ~vlI~Gag~vG~~a-i~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
++.|.|+|.+|... ..+.+..+++.+.+++.++++ .++.+++|..... .++...+ ....+|+||+
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll------~~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLL------ANPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHh------cCCCCCEEEE
Confidence 68889999999754 566666677544445555544 4567778855332 1222222 1246999999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEe
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
+++...+.......+..+=.++..
T Consensus 71 aTp~~~H~e~a~~al~aGk~VIde 94 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVIDL 94 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEEC
Confidence 999876666666666554444433
No 438
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.19 E-value=0.23 Score=38.27 Aligned_cols=93 Identities=18% Similarity=0.304 Sum_probs=59.4
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 188 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 188 (290)
+|.|.|+ |-+|...++-|..+|- .|+++.++++|....+.+- ++. ..--++.+ +.+ .-.++|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q--~Difd~~~-~a~----~l~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQ--KDIFDLTS-LAS----DLAGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eec--ccccChhh-hHh----hhcCCceEEEec
Confidence 5778888 9999999999999999 5888889999876532221 111 00011111 111 125899999998
Q ss_pred CCH---------HHHHHHHHHhccC--CEEEEeccC
Q 022879 189 GLN---------KTMSTALGATCAG--GKVCLVGMG 213 (290)
Q Consensus 189 g~~---------~~~~~~~~~l~~~--G~~v~~g~~ 213 (290)
|.. ...+.++..|+.- -|+..+|..
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 764 1233466666653 477777753
No 439
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.16 E-value=0.13 Score=42.77 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=51.7
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
+++......+++++|.|+|+.+.+++.-+..+|+..+.++.+++++.+.+ +.++.. +...+ .
T Consensus 113 ~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~------~ 175 (272)
T PRK12550 113 LLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL------G 175 (272)
T ss_pred HHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc------c
Confidence 34433444567899999999999999999999998899998998876654 334311 00011 1
Q ss_pred CCCccEEEEccCC
Q 022879 178 GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ~~~~d~vid~~g~ 190 (290)
...+|+|++|+..
T Consensus 176 ~~~~dlvINaTp~ 188 (272)
T PRK12550 176 GIEADILVNVTPI 188 (272)
T ss_pred cccCCEEEECCcc
Confidence 2358999999863
No 440
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.15 E-value=0.15 Score=48.09 Aligned_cols=77 Identities=22% Similarity=0.292 Sum_probs=53.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEecCCCccc
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQD 165 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~ 165 (290)
.+++|+|.|+|+.|+.++..++..|.+ |++.+..+. ..++++.+|.+..++..- ..+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence 489999999999999999999999994 777766652 456667788765443211 111
Q ss_pred HHHHHHHHHHHhCCCccEEEEccCCH
Q 022879 166 IAEEVEKIQKAMGTGIDVSFDCAGLN 191 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~vid~~g~~ 191 (290)
. .+.++ ...+|.||.++|..
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 12222 13699999999963
No 441
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.13 E-value=0.29 Score=43.21 Aligned_cols=83 Identities=22% Similarity=0.301 Sum_probs=49.4
Q ss_pred CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-------HHHHcCCCEEEecCCCcccHHHHHHHHHH
Q 022879 104 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-------VAKEIGADNIVKVSTNLQDIAEEVEKIQK 175 (290)
Q Consensus 104 ~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-------~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
....+.+|||+|+ |.+|..+++.+...|. .|+++.++..+.+ ..+......++..+-.+. +.+.++.+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~---~~l~~~~~ 131 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA---DSLRKVLF 131 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH---HHHHHHHH
Confidence 3456789999988 9999999998888898 5777777654321 111222222232222222 23333322
Q ss_pred HhCCCccEEEEccCC
Q 022879 176 AMGTGIDVSFDCAGL 190 (290)
Q Consensus 176 ~~~~~~d~vid~~g~ 190 (290)
..+.++|+||+|++.
T Consensus 132 ~~~~~~D~Vi~~aa~ 146 (390)
T PLN02657 132 SEGDPVDVVVSCLAS 146 (390)
T ss_pred HhCCCCcEEEECCcc
Confidence 112269999998864
No 442
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.11 E-value=0.45 Score=36.55 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=51.9
Q ss_pred CCCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 105 IGPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 105 ~~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
--.+.++||.|+|. +|..++.+++..|+ .+.++.++. +++.+.+ ..+|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi 90 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI 90 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence 45889999999986 59989999999999 566665431 1111111 34899
Q ss_pred EEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 184 SFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 184 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
||.+++.+..+.. +.++++-.++.++..
T Consensus 91 VIsat~~~~ii~~--~~~~~~~viIDla~p 118 (168)
T cd01080 91 VIVAVGKPGLVKG--DMVKPGAVVIDVGIN 118 (168)
T ss_pred EEEcCCCCceecH--HHccCCeEEEEccCC
Confidence 9999998653322 346666666677644
No 443
>PRK05599 hypothetical protein; Provisional
Probab=95.11 E-value=0.36 Score=39.48 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=47.0
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGI 181 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 181 (290)
++||+|+ +++|.+.++.+. .|. .|+.+++++++.+.+ + +.+.. ..+..|-.+ ++..+.+.++.+ ..+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQE-LAGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHH-hcCCC
Confidence 5899987 999988888665 487 577777877665533 2 23322 233333222 233333333332 23579
Q ss_pred cEEEEccCC
Q 022879 182 DVSFDCAGL 190 (290)
Q Consensus 182 d~vid~~g~ 190 (290)
|+++++.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999998875
No 444
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.31 Score=39.95 Aligned_cols=84 Identities=19% Similarity=0.311 Sum_probs=48.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEecCC-CcccHHHHHHHHHHHh--
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAM-- 177 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~-- 177 (290)
.+.+++|+|+ |.+|...++.+...|.+.++...++.++.+ ..+.+ +.. ..+..+- ..+++.+.+++..+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999988 999999999888889853333455555433 32332 211 1222222 2223333333332211
Q ss_pred ---CCCccEEEEccCC
Q 022879 178 ---GTGIDVSFDCAGL 190 (290)
Q Consensus 178 ---~~~~d~vid~~g~ 190 (290)
..++|++|++.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1469999999875
No 445
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.10 E-value=0.81 Score=37.74 Aligned_cols=100 Identities=24% Similarity=0.277 Sum_probs=66.5
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHHhC
Q 022879 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMG 178 (290)
Q Consensus 100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
+....+.++++||=.|+|. |..+..+++..+...+++++.++...+.+++... ..++. .+. .++. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence 3445567889999998765 6677788887654489999999998887766422 22222 111 1111 23
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhccCCEEEEec
Q 022879 179 TGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 179 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 211 (290)
..+|+|+-...- ...+..+.+.|+++|.++...
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 479999765432 246778889999999998753
No 446
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.08 E-value=1.5 Score=35.62 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=29.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
..+|+|.|.|++|..+++.+...|...+..++.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999888888654
No 447
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.06 E-value=0.59 Score=39.92 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=57.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|+++.|.|-|.+|...+++++.+|+ .|++.+..... .... ...++ .++. ...|+|+-
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~-----~~~~--------~~~~l----~ell----~~sDiv~l 203 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGAS-----VCRE--------GYTPF----EEVL----KQADIVTL 203 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCccc-----cccc--------ccCCH----HHHH----HhCCEEEE
Confidence 46899999999999999999999999 57777543211 0000 01123 2322 23688887
Q ss_pred ccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKT-----MSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 214 (290)
+....+. -...++.|+++..++.++...
T Consensus 204 ~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 236 (314)
T PRK06932 204 HCPLTETTQNLINAETLALMKPTAFLINTGRGP 236 (314)
T ss_pred cCCCChHHhcccCHHHHHhCCCCeEEEECCCcc
Confidence 7664322 235788999999999998654
No 448
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.06 E-value=0.31 Score=41.41 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=46.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHH-HHH---HHcCCCE-EEecCCCc-ccHHHHHHHHHHHhC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRL-SVA---KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG 178 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~-~~~---~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~ 178 (290)
.++++||+|+ +++|...++.+...|+ .|+.++.. .++. +.. +..+... .+..+-.+ ++..+.+++..+ -
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 4678999987 9999999988888899 46666543 2222 222 2334222 22222111 222222222222 3
Q ss_pred CCccEEEEccCC
Q 022879 179 TGIDVSFDCAGL 190 (290)
Q Consensus 179 ~~~d~vid~~g~ 190 (290)
+++|++|++.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 479999999875
No 449
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.05 E-value=1.1 Score=37.25 Aligned_cols=35 Identities=23% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
.+.+|+|.|.|++|..++..+...|...+..++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998888887654
No 450
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.05 E-value=0.39 Score=40.45 Aligned_cols=94 Identities=21% Similarity=0.225 Sum_probs=56.2
Q ss_pred CeEEEECCCHHHHH-HHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 109 TNVLIMGAGPIGLV-TMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 109 ~~vlI~Gag~vG~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
-++.|.|.|.+|.. +..+.+.-+++.+.+++.+++ ...+.+++|..... .++...+.+ ..-.++|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence 47899999999986 555555556754555555554 34567778754221 233222211 0114699999
Q ss_pred EccCCHHHHHHHHHHhccCCEEEEec
Q 022879 186 DCAGLNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 186 d~~g~~~~~~~~~~~l~~~G~~v~~g 211 (290)
++++...+.......+..+-.++...
T Consensus 76 ~AT~a~~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence 99997655555555555555555544
No 451
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=95.04 E-value=0.7 Score=37.39 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=64.1
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK 175 (290)
Q Consensus 101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
....++++++||=.|+|. |..+..+++..+. ..+++++.+++..+.+++ .+.+.+..... +. .++.
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~----~~~~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NA----MELP- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---ch----hcCC-
Confidence 335678899999998765 6677788877643 279999999888776653 22221111111 11 0110
Q ss_pred HhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879 176 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 176 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
.....+|+|+-+..- ...+..+.+.|+++|.++....
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 123579999753221 2356778899999999987654
No 452
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.02 E-value=0.9 Score=39.09 Aligned_cols=88 Identities=20% Similarity=0.186 Sum_probs=59.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|.+|.|.|.|.+|...++.++.+|. .|++.+.+++..... . .+ ..++.+.+ ...|+|+-
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~---~~~l~ell--------~~aDiVil 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TY---KDSVKEAI--------KDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hc---cCCHHHHH--------hcCCEEEE
Confidence 56789999999999999999999999 688888776543210 0 00 11222222 34799988
Q ss_pred ccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKT-----MSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 214 (290)
++..... ....+..++++..+|..+...
T Consensus 205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence 8876431 234667788888888887544
No 453
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.01 E-value=0.41 Score=37.83 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|...++.+-..|.+.+..++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999999988887654
No 454
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.00 E-value=0.49 Score=40.13 Aligned_cols=87 Identities=24% Similarity=0.214 Sum_probs=59.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|+++.|.|.|.+|+..+++++.+|+ .|++.+++... .+.... + .+ ++++. ...|+|+.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~----~~----l~ell----~~aDiv~~ 179 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--Y----ME----PEDIM----KKSDFVLI 179 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--c----CC----HHHHH----hhCCEEEE
Confidence 58899999999999999999999999 68888765321 121110 0 12 22222 24789988
Q ss_pred ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKTM-----STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 214 (290)
+....+.. ...+..++++..++.++...
T Consensus 180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 180 SLPLTDETRGMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred CCCCCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence 88754322 34678899999999887654
No 455
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.98 E-value=0.4 Score=41.06 Aligned_cols=98 Identities=20% Similarity=0.272 Sum_probs=59.0
Q ss_pred eEEEECCCHHHHHHHHHHHHCC----CCeEEEEeC--ChhHHHHHHHcCCC------------EEEecCCC------ccc
Q 022879 110 NVLIMGAGPIGLVTMLAARAFG----APRIVIVDV--DDYRLSVAKEIGAD------------NIVKVSTN------LQD 165 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~------------~~~~~~~~------~~~ 165 (290)
+|.|.|.|.+|...++.+...+ + .++.+.. +.+...++-+++.. ..+.++.. ..+
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999887654 5 3555522 23344444333210 00001100 001
Q ss_pred HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
.. .+ .| ...++|+||+|+|.......+...+..+++.+.++.+
T Consensus 80 p~-~~-~w---~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PE-AL-PW---RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hh-hc-cc---cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 11 00 12 2358999999999876677788889988899888744
No 456
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=94.96 E-value=0.64 Score=39.71 Aligned_cols=91 Identities=23% Similarity=0.237 Sum_probs=62.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE-
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF- 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi- 185 (290)
.|++|.|.|.|.+|+..++-++.+|. .+.-..++..+.+...+.++.. .++.+.+ ...|+++
T Consensus 161 ~gK~vgilG~G~IG~~ia~rL~~Fg~-~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~ivv 223 (336)
T KOG0069|consen 161 EGKTVGILGLGRIGKAIAKRLKPFGC-VILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIVV 223 (336)
T ss_pred cCCEEEEecCcHHHHHHHHhhhhccc-eeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEEE
Confidence 68899999999999999999999994 6777777666666666655541 2332222 2356664
Q ss_pred EccCCHHH----HHHHHHHhccCCEEEEeccCC
Q 022879 186 DCAGLNKT----MSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 186 d~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 214 (290)
+|...+.+ -...+..|++++.+|..+...
T Consensus 224 ~~pLt~~T~~liNk~~~~~mk~g~vlVN~aRG~ 256 (336)
T KOG0069|consen 224 NCPLTKETRHLINKKFIEKMKDGAVLVNTARGA 256 (336)
T ss_pred ecCCCHHHHHHhhHHHHHhcCCCeEEEeccccc
Confidence 44444322 224788899999999887543
No 457
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.93 E-value=0.4 Score=39.25 Aligned_cols=80 Identities=24% Similarity=0.275 Sum_probs=46.7
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hH-HHHH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YR-LSVA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~-~~~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (290)
+++||+|+ |.+|...+..+...|+ .++.++++. ++ .+.. +..+.. ..+..+-. ..++.+.++++.+.. .+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 57899988 9999999998888899 466666543 22 1222 222321 22222222 223333344443322 46
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 458
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.89 E-value=0.19 Score=41.30 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=56.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
++.+|||+|+ |.+|...++.+...|. .|+++.+++++......-+ .-.++..+-.+ ..+.+.+. -+.++|++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~l~~~---~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--GSDKLVEA---IGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--CHHHHHHH---hhcCCCEE
Confidence 4679999998 9999999988888898 5777767766543221111 11222211111 11122211 12369999
Q ss_pred EEccCCHH-------------HHHHHHHHhcc--CCEEEEecc
Q 022879 185 FDCAGLNK-------------TMSTALGATCA--GGKVCLVGM 212 (290)
Q Consensus 185 id~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~ 212 (290)
|.+.|... ....+++.+.. .++++.++.
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS 132 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS 132 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99877421 12344444443 367888764
No 459
>PLN00203 glutamyl-tRNA reductase
Probab=94.85 E-value=0.26 Score=44.99 Aligned_cols=75 Identities=21% Similarity=0.379 Sum_probs=51.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
+.+|+|.|+|.+|.++++.+...|++.++++.++.++.+.+ ..++...+. + ..+. .+.+. -...|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~-dl~~a----l~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLD-EMLAC----AAEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHh-hHHHH----HhcCCEEEE
Confidence 68899999999999999999999987788888998876644 445421111 0 1111 12111 146899999
Q ss_pred ccCCHH
Q 022879 187 CAGLNK 192 (290)
Q Consensus 187 ~~g~~~ 192 (290)
|++.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987643
No 460
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.83 E-value=0.15 Score=38.88 Aligned_cols=81 Identities=22% Similarity=0.222 Sum_probs=51.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.|..|+++|+ -++|...++-+...|+ .|+++.++++.+..+-+.-...+...-..-.+|. .+.+... .-.++|..+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~we-a~~~~l~-~v~pidgLV 82 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGDLSAWE-ALFKLLV-PVFPIDGLV 82 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEecccHHH-HHHHhhc-ccCchhhhh
Confidence 5778999998 7899999999999999 6999999998877554433333333222223333 3333321 123566666
Q ss_pred EccCC
Q 022879 186 DCAGL 190 (290)
Q Consensus 186 d~~g~ 190 (290)
+..|.
T Consensus 83 NNAgv 87 (245)
T KOG1207|consen 83 NNAGV 87 (245)
T ss_pred ccchh
Confidence 66554
No 461
>PRK07069 short chain dehydrogenase; Validated
Probab=94.82 E-value=0.35 Score=39.49 Aligned_cols=79 Identities=22% Similarity=0.304 Sum_probs=46.3
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH-HHc----CCCEE--EecC-CCcccHHHHHHHHHHHhCC
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-KEI----GADNI--VKVS-TNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~-~~l----g~~~~--~~~~-~~~~~~~~~~~~~~~~~~~ 179 (290)
+++|+|+ |.+|...++.+...|+ .++.++++ .++.+.+ +.+ +...+ +..+ .+.+++.+.+.+..+ .-.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD-AMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH-HcC
Confidence 3789987 9999999998888899 57777665 4443322 222 11111 2111 122334333433332 234
Q ss_pred CccEEEEccCC
Q 022879 180 GIDVSFDCAGL 190 (290)
Q Consensus 180 ~~d~vid~~g~ 190 (290)
++|+++.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (251)
T PRK07069 79 GLSVLVNNAGV 89 (251)
T ss_pred CccEEEECCCc
Confidence 69999999874
No 462
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.81 E-value=0.24 Score=35.70 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=51.1
Q ss_pred eEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCCh-hHHHHHHHcC----CCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 110 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDD-YRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
+|.|.|+ |.+|...++++.. -.++.+..++++. ....+...++ .... .... .+ ..++ .+.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~--~~----~~~~-----~~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVED--AD----PEEL-----SDVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEE--TS----GHHH-----TTES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEee--cc----hhHh-----hcCC
Confidence 6889997 9999999998876 3554444455554 2222222222 1111 1111 11 1111 4699
Q ss_pred EEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+||.|++........-..+..+-+++.++..
T Consensus 69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence 9999999643333344445667788888643
No 463
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.79 E-value=0.83 Score=39.15 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.|+++.|.|.|.+|...++.++ .+|. .|+..++... .+....++... .++.+.+ ...|+|.
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm-~V~~~~~~~~-~~~~~~~~~~~--------~~l~ell--------~~sDvv~ 205 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNM-PILYNARRHH-KEAEERFNARY--------CDLDTLL--------QESDFVC 205 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCC-EEEEECCCCc-hhhHHhcCcEe--------cCHHHHH--------HhCCEEE
Confidence 5689999999999999999998 8999 5776655432 22223344321 1222222 2368887
Q ss_pred EccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879 186 DCAGLNKT-----MSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 186 d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 214 (290)
-+...... -...++.|+++..+|..+...
T Consensus 206 lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 239 (323)
T PRK15409 206 IILPLTDETHHLFGAEQFAKMKSSAIFINAGRGP 239 (323)
T ss_pred EeCCCChHHhhccCHHHHhcCCCCeEEEECCCcc
Confidence 76654321 124778899999999887654
No 464
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.77 E-value=0.28 Score=38.70 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=57.1
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 179 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
...++.+||-.|+|. |..+..+++ .|. .|++++.++...+.++.. +.. +.. ...+.. .+ .-..
T Consensus 27 ~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~--~~~d~~----~~--~~~~ 93 (195)
T TIGR00477 27 KTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRT--DAYDIN----AA--ALNE 93 (195)
T ss_pred ccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--cee--Eeccch----hc--cccC
Confidence 344567888888755 666667776 477 699999999877766432 221 110 001110 01 0124
Q ss_pred CccEEEEcc-----CC---HHHHHHHHHHhccCCEEEEec
Q 022879 180 GIDVSFDCA-----GL---NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 180 ~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g 211 (290)
.+|+|+.+. .. ...+..+.+.|+++|.++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 699997642 11 246677888999999965543
No 465
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.4 Score=38.98 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=46.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC----ChhHHHHH----HHcCCC-EEEecCCCcc-cHHHHHHHHHH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV----DDYRLSVA----KEIGAD-NIVKVSTNLQ-DIAEEVEKIQK 175 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~----~~~~~~~~----~~lg~~-~~~~~~~~~~-~~~~~~~~~~~ 175 (290)
.+.++||+|+ |.+|...+..+...|++ ++.+.+ ++++.+.+ +..+.. ..+..+-.+. +..+.++++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999988 99999999888888995 555432 23332221 222322 2222222222 22233333322
Q ss_pred HhCCCccEEEEccCC
Q 022879 176 AMGTGIDVSFDCAGL 190 (290)
Q Consensus 176 ~~~~~~d~vid~~g~ 190 (290)
...++|.+|.+.|.
T Consensus 84 -~~~~~d~vi~~ag~ 97 (249)
T PRK12827 84 -EFGRLDILVNNAGI 97 (249)
T ss_pred -HhCCCCEEEECCCC
Confidence 22469999999874
No 466
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.72 E-value=0.57 Score=37.98 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=46.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcC---C-CEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIG---A-DNIVKVSTNL-QDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg---~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (290)
+++||+|+ |.+|..+++.+...|. .++.+.+++. ..+....+. . -..+..+-.+ ++..+.++++.. ...+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEE-EEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence 47899987 9999999998888898 5777766632 222222222 1 1222222222 223333333322 2356
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|++|++.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 467
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.69 E-value=1.2 Score=32.50 Aligned_cols=93 Identities=20% Similarity=0.284 Sum_probs=53.1
Q ss_pred EEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCCh--hH-HHHHHHcCCCEEEecCCCcccHHHHHHHHH----------
Q 022879 111 VLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQ---------- 174 (290)
Q Consensus 111 vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~---------- 174 (290)
|.|.|+ |++|..++++.+... + .+++..... ++ .+.+++|.+..+...+ ++....+++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 567898 999999999999987 5 455554432 22 3345678877776533 22222232211
Q ss_pred -------HH-hCCCccEEEEccCCHHHHHHHHHHhccCCEE
Q 022879 175 -------KA-MGTGIDVSFDCAGLNKTMSTALGATCAGGKV 207 (290)
Q Consensus 175 -------~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 207 (290)
+. ....+|+++.++-+-..+.-.+..++.+=++
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i 117 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI 117 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence 11 1246788888776666677777777655443
No 468
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.4 Score=45.42 Aligned_cols=81 Identities=23% Similarity=0.275 Sum_probs=50.8
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 180 (290)
+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +. .+.. ..+..+- +.+++.+.++++.+. -++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE-HGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence 678999988 9999999998888899 688888887765433 22 2322 1222221 222333333433322 246
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
+|+++++.|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 469
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.68 E-value=0.33 Score=45.08 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=55.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879 109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 188 (290)
Q Consensus 109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 188 (290)
++++|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- |..+ .+.+++. +-...|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence 789999999999999999999998 5999999999999999887654432 2222 2233332 335788888777
Q ss_pred CCH
Q 022879 189 GLN 191 (290)
Q Consensus 189 g~~ 191 (290)
+.+
T Consensus 490 ~~~ 492 (558)
T PRK10669 490 PNG 492 (558)
T ss_pred CCh
Confidence 654
No 470
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.67 E-value=0.21 Score=41.84 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=54.2
Q ss_pred CCCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 105 IGPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 105 ~~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
--.|++++|.|.|+ +|...+.++...|+ .|.+..+.. .++.+.+ ..+|+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t---------------------~~L~~~~--------~~aDI 205 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT---------------------QNLPELV--------KQADI 205 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc---------------------hhHHHHh--------ccCCE
Confidence 35788999999976 99999999999999 565553311 1111111 35899
Q ss_pred EEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 184 SFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 184 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+|+++|.+..+. .+.++++..++.+|..
T Consensus 206 vI~AtG~~~~v~--~~~lk~gavViDvg~n 233 (283)
T PRK14192 206 IVGAVGKPELIK--KDWIKQGAVVVDAGFH 233 (283)
T ss_pred EEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence 999998765333 3568888888888854
No 471
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.66 E-value=0.46 Score=40.52 Aligned_cols=87 Identities=24% Similarity=0.222 Sum_probs=58.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|+++.|.|-|.+|+..+++++.+|+ +|++.+++.... ..+. . ..+ +.++. ...|+|.-
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm-~V~~~d~~~~~~----~~~~----~----~~~----l~ell----~~sDvv~l 202 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGA-KVVYYSTSGKNK----NEEY----E----RVS----LEELL----KTSDIISI 202 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCC-EEEEECCCcccc----ccCc----e----eec----HHHHh----hcCCEEEE
Confidence 67899999999999999999999999 688887653211 1111 1 112 33332 23688877
Q ss_pred ccCCHH-----HHHHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNK-----TMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
++...+ .-...++.|+++..+|.++...
T Consensus 203 h~Plt~~T~~li~~~~~~~Mk~~a~lIN~aRG~ 235 (311)
T PRK08410 203 HAPLNEKTKNLIAYKELKLLKDGAILINVGRGG 235 (311)
T ss_pred eCCCCchhhcccCHHHHHhCCCCeEEEECCCcc
Confidence 665422 1235788999999999998654
No 472
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.64 E-value=0.68 Score=42.61 Aligned_cols=90 Identities=19% Similarity=0.248 Sum_probs=62.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.|+++.|.|.|.+|+..++.++.+|+ .|++.++... .+....++.... + +.++. ...|+|+-
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~-~~~~~~~g~~~~--------~----l~ell----~~aDiV~l 200 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGM-KVIAYDPYIS-PERAAQLGVELV--------S----LDELL----ARADFITL 200 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCC-hhHHHhcCCEEE--------c----HHHHH----hhCCEEEE
Confidence 47899999999999999999999999 6888876432 222334554321 2 22222 24689988
Q ss_pred ccCCHHH----H-HHHHHHhccCCEEEEeccCC
Q 022879 187 CAGLNKT----M-STALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 187 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~ 214 (290)
++..... + ...++.++++..++.++...
T Consensus 201 ~lP~t~~t~~li~~~~l~~mk~ga~lIN~aRG~ 233 (526)
T PRK13581 201 HTPLTPETRGLIGAEELAKMKPGVRIINCARGG 233 (526)
T ss_pred ccCCChHhhcCcCHHHHhcCCCCeEEEECCCCc
Confidence 8776422 2 34678889999999887654
No 473
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.64 E-value=0.4 Score=38.13 Aligned_cols=106 Identities=22% Similarity=0.255 Sum_probs=67.5
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM 177 (290)
Q Consensus 103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
.+....++||-.|.+. |+.++.+++.+.- .++++++.++++.+.+++ .|...-+.+ ...+..+.+.++....
T Consensus 41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~--~~gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEV--IEGDALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEE--EES-HHHHHHHHHHTT
T ss_pred HHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEE--EEeccHhhHHHHHhcc
Confidence 3445667999998754 8888999988742 279999999998887754 443222221 1234445555554222
Q ss_pred -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879 178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 211 (290)
.+.||.||--... ...+..+++.|+++|.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 2479999543332 235667889999999888654
No 474
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.64 E-value=0.7 Score=38.52 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=58.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
.++++++|.|+|++|.+++..+...|. .+.++++++++.+ +.+.+.... +... ++. +. ....+|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~----~~---~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMD----EL---PLHRVDL 181 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chh----hh---cccCccE
Confidence 457889999999999999988888898 6788888877654 334443211 1110 111 11 1235899
Q ss_pred EEEccCCHH--HH---HHHHHHhccCCEEEEeccC
Q 022879 184 SFDCAGLNK--TM---STALGATCAGGKVCLVGMG 213 (290)
Q Consensus 184 vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~ 213 (290)
||+|++... .. ......++++..++.+...
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 999998621 01 1123456677777777543
No 475
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.62 E-value=0.53 Score=40.13 Aligned_cols=83 Identities=24% Similarity=0.311 Sum_probs=51.3
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC----CCEE--EecCC-CcccHHHHHHHHHHH
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG----ADNI--VKVST-NLQDIAEEVEKIQKA 176 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg----~~~~--~~~~~-~~~~~~~~~~~~~~~ 176 (290)
-.+.+++|+|+ +++|...+.-+...|+ .|+...++.++.+.+ +.+. ...+ +..|- +..+......++ +.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~-~~ 110 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF-KK 110 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH-Hh
Confidence 35578889998 9999999999999998 577777887554433 3322 2222 11111 112222222222 23
Q ss_pred hCCCccEEEEccCC
Q 022879 177 MGTGIDVSFDCAGL 190 (290)
Q Consensus 177 ~~~~~d~vid~~g~ 190 (290)
...+.|+.|+++|.
T Consensus 111 ~~~~ldvLInNAGV 124 (314)
T KOG1208|consen 111 KEGPLDVLINNAGV 124 (314)
T ss_pred cCCCccEEEeCccc
Confidence 46789999998875
No 476
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.62 E-value=0.21 Score=47.31 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=50.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEecCCCcc
Q 022879 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQ 164 (290)
Q Consensus 106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~ 164 (290)
..+.+|+|.|+|+.|++++..+...|. .|++++..+. ..+.++.+|.+...+.. ...
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~-v~~ 402 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCE-VGK 402 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCE-eCC
Confidence 357899999999999999999999999 4777766532 34455667754332210 001
Q ss_pred cHHHHHHHHHHHhCCCccEEEEccCC
Q 022879 165 DIAEEVEKIQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~d~vid~~g~ 190 (290)
+. .++++ ...+|.||.++|.
T Consensus 403 ~i--~~~~~----~~~~DavilAtGa 422 (654)
T PRK12769 403 DI--SLESL----LEDYDAVFVGVGT 422 (654)
T ss_pred cC--CHHHH----HhcCCEEEEeCCC
Confidence 11 11222 1359999999886
No 477
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.62 E-value=2.1 Score=35.11 Aligned_cols=96 Identities=18% Similarity=0.282 Sum_probs=62.0
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
...++.+||-.|+|. |..+..+++ .|. .+++++.+++..+.++.... ...+..+. ++ + ......||
T Consensus 39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~-------~-~~~~~~fD 105 (251)
T PRK10258 39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ES-------L-PLATATFD 105 (251)
T ss_pred CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--cc-------C-cCCCCcEE
Confidence 334678899888865 655555554 576 79999999999888876432 22222111 11 1 01234699
Q ss_pred EEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879 183 VSFDCAGL------NKTMSTALGATCAGGKVCLVGM 212 (290)
Q Consensus 183 ~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 212 (290)
+|+....- ...+..+.+.|+++|.++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99875431 2467788899999999987653
No 478
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=94.60 E-value=0.077 Score=44.77 Aligned_cols=29 Identities=31% Similarity=0.482 Sum_probs=25.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRI 135 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~v 135 (290)
+...|||.|+|+.|.=++|++.+.|+.++
T Consensus 65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~l 93 (427)
T KOG2017|consen 65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRL 93 (427)
T ss_pred CCccEEEEccCCCCCHHHHHHHHcCCCee
Confidence 45789999999999999999999999754
No 479
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.53 E-value=0.54 Score=38.57 Aligned_cols=82 Identities=12% Similarity=0.109 Sum_probs=46.5
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCC------------hhHHHHHH---HcCCC-EEEecCCC-cccH
Q 022879 107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVD------------DYRLSVAK---EIGAD-NIVKVSTN-LQDI 166 (290)
Q Consensus 107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~~~---~lg~~-~~~~~~~~-~~~~ 166 (290)
.++++||+|++ ++|...+..+...|+ .++.++++ ++...+.+ ..+.. ..+..+-. ..+.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 45789999873 799998888888899 46666554 22222222 23322 22222222 2233
Q ss_pred HHHHHHHHHHhCCCccEEEEccCC
Q 022879 167 AEEVEKIQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~d~vid~~g~ 190 (290)
...++++.+.. .++|++|++.|.
T Consensus 83 ~~~~~~~~~~~-g~id~vi~~ag~ 105 (256)
T PRK12748 83 NRVFYAVSERL-GDPSILINNAAY 105 (256)
T ss_pred HHHHHHHHHhC-CCCCEEEECCCc
Confidence 33344443322 469999999874
No 480
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=94.49 E-value=0.61 Score=39.94 Aligned_cols=90 Identities=21% Similarity=0.190 Sum_probs=56.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
|+++.|.|.|.+|+..++.++.+|+ .|++.+....+. .....+... ..++.+.++ ..|++.-.
T Consensus 142 gkTvGIiG~G~IG~~va~~l~afgm-~v~~~d~~~~~~-~~~~~~~~~-------~~~Ld~lL~--------~sDiv~lh 204 (324)
T COG0111 142 GKTVGIIGLGRIGRAVAKRLKAFGM-KVIGYDPYSPRE-RAGVDGVVG-------VDSLDELLA--------EADILTLH 204 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCCchh-hhcccccee-------cccHHHHHh--------hCCEEEEc
Confidence 7899999999999999999999999 688887722221 111111111 122322222 35777665
Q ss_pred cCCHH-----HHHHHHHHhccCCEEEEeccCC
Q 022879 188 AGLNK-----TMSTALGATCAGGKVCLVGMGH 214 (290)
Q Consensus 188 ~g~~~-----~~~~~~~~l~~~G~~v~~g~~~ 214 (290)
+...+ .-...+..|+++..++.++...
T Consensus 205 ~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~ 236 (324)
T COG0111 205 LPLTPETRGLINAEELAKMKPGAILINAARGG 236 (324)
T ss_pred CCCCcchhcccCHHHHhhCCCCeEEEECCCcc
Confidence 55422 1224677888888887776543
No 481
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.45 E-value=0.33 Score=36.57 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=62.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHH-----HhCCCc
Q 022879 108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGI 181 (290)
Q Consensus 108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 181 (290)
..+|+|+|+ |.+|.+.++..++.++ -|.-++-++.... ....++ ..+.+|.++-+...+ ..+.++
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----d~sI~V---~~~~swtEQe~~v~~~vg~sL~gekv 73 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----DSSILV---DGNKSWTEQEQSVLEQVGSSLQGEKV 73 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----cceEEe---cCCcchhHHHHHHHHHHHHhhccccc
Confidence 358999988 9999999999999999 5777766654321 122222 334556554443332 357789
Q ss_pred cEEEEccCCH--------H-------HH-----------HHHHHHhccCCEEEEecc
Q 022879 182 DVSFDCAGLN--------K-------TM-----------STALGATCAGGKVCLVGM 212 (290)
Q Consensus 182 d~vid~~g~~--------~-------~~-----------~~~~~~l~~~G~~v~~g~ 212 (290)
|.||.-.|+= + .+ ..+...|+++|-+.+.|.
T Consensus 74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA 130 (236)
T KOG4022|consen 74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA 130 (236)
T ss_pred ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence 9999877641 1 11 114456888888877764
No 482
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.45 E-value=0.17 Score=40.11 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=53.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 185 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 185 (290)
.|.+++|.|.|.+|..+++.+...|+ .|++.+.++++.+.+. .+++.. ++ . ++ + ....+|+++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~--~--~~-------l---~~~~~Dv~v 90 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VA--P--EE-------I---YSVDADVFA 90 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ec--c--hh-------h---ccccCCEEE
Confidence 67899999999999999999999999 6788888888766554 456432 22 1 11 1 123589999
Q ss_pred EccCCHHHHHHHHHHhc
Q 022879 186 DCAGLNKTMSTALGATC 202 (290)
Q Consensus 186 d~~g~~~~~~~~~~~l~ 202 (290)
-|......-...++.++
T Consensus 91 p~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 91 PCALGGVINDDTIPQLK 107 (200)
T ss_pred ecccccccCHHHHHHcC
Confidence 76554333334455554
No 483
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.45 E-value=0.52 Score=39.00 Aligned_cols=81 Identities=19% Similarity=0.140 Sum_probs=45.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHH-HHHHcC----CC-EEEecCCCcc-cHHHHHHHHHH---H
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLS-VAKEIG----AD-NIVKVSTNLQ-DIAEEVEKIQK---A 176 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~-~~~~lg----~~-~~~~~~~~~~-~~~~~~~~~~~---~ 176 (290)
.+++|+|+ +++|...++.+...|++ |+.+. +++++.+ ..+++. .. ..+..+-.+. ...+.++++.+ .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 46899988 99999999998889995 55543 3333333 333332 11 1222222222 22122222211 1
Q ss_pred hCCCccEEEEccCC
Q 022879 177 MGTGIDVSFDCAGL 190 (290)
Q Consensus 177 ~~~~~d~vid~~g~ 190 (290)
.-+++|++|++.|.
T Consensus 81 ~~g~iD~lv~nAG~ 94 (267)
T TIGR02685 81 AFGRCDVLVNNASA 94 (267)
T ss_pred ccCCceEEEECCcc
Confidence 23469999999874
No 484
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.41 E-value=0.31 Score=39.45 Aligned_cols=70 Identities=23% Similarity=0.335 Sum_probs=47.0
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 111 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 111 vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
|+|.|+ |.+|...++.+...+.+ |.+..++.. ..+.++..|+..+ ..+.. +. +.+.+.. .++|.||.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~-V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~--~~-~~l~~al----~g~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS-VRALVRDPSSDRAQQLQALGAEVV-EADYD--DP-ESLVAAL----KGVDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC-EEEEESSSHHHHHHHHHHTTTEEE-ES-TT---H-HHHHHHH----TTCSEEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCC-cEEEEeccchhhhhhhhcccceEe-ecccC--CH-HHHHHHH----cCCceEEee
Confidence 789998 99999999999888885 666656653 3455677887644 33222 22 2333322 479999999
Q ss_pred cC
Q 022879 188 AG 189 (290)
Q Consensus 188 ~g 189 (290)
++
T Consensus 72 ~~ 73 (233)
T PF05368_consen 72 TP 73 (233)
T ss_dssp SS
T ss_pred cC
Confidence 88
No 485
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.46 Score=38.03 Aligned_cols=76 Identities=21% Similarity=0.241 Sum_probs=46.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
.++||+|+ |.+|...+..+... . .|++++++.++.+.+. .+....++..+-. + .+.+++..... .++|.+|+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLT--D-PEAIAAAVEQL-GRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCC--C-HHHHHHHHHhc-CCCCEEEE
Confidence 57999987 99999888876666 6 5888888876655443 2322223322221 2 12333332211 26999999
Q ss_pred ccCC
Q 022879 187 CAGL 190 (290)
Q Consensus 187 ~~g~ 190 (290)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9875
No 486
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.41 E-value=0.83 Score=39.95 Aligned_cols=35 Identities=31% Similarity=0.539 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
...+|+|.|+|++|..++..+...|...+..++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999888888665
No 487
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=94.39 E-value=0.4 Score=37.30 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=27.7
Q ss_pred eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD 141 (290)
Q Consensus 110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~ 141 (290)
++||+|+ |++|+..++.+...|...++.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 6899987 9999999999998888889998888
No 488
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.39 E-value=1.3 Score=31.58 Aligned_cols=87 Identities=25% Similarity=0.263 Sum_probs=56.6
Q ss_pred eEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHHH-HHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879 110 NVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 186 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid 186 (290)
++.|.|.|.+|.....-.+.. +.+.+.+.+.++++.+. .+.++.. .+ . ++.+.+. ...+|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~----~~~~ll~------~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--T----DLEELLA------DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--S----SHHHHHH------HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--h----HHHHHHH------hhcCCEEEE
Confidence 678999999998887655555 45334455777766664 4667765 32 1 3333322 236999999
Q ss_pred ccCCHHHHHHHHHHhccCCEEEEe
Q 022879 187 CAGLNKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 187 ~~g~~~~~~~~~~~l~~~G~~v~~ 210 (290)
++....+...+..++..+- -+.+
T Consensus 69 ~tp~~~h~~~~~~~l~~g~-~v~~ 91 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGK-HVLV 91 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTS-EEEE
T ss_pred ecCCcchHHHHHHHHHcCC-EEEE
Confidence 9998777777777776554 4444
No 489
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.34 E-value=0.95 Score=35.91 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=62.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
++.+||-.|+|. |..+..+++......+++++.+++..+.+++ .+...+.... .+..+.+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 667888888866 7777788877644479999999998887754 2322221111 2221122111 1245689
Q ss_pred EEEEccC--------------CHHHHHHHHHHhccCCEEEEec
Q 022879 183 VSFDCAG--------------LNKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 183 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g 211 (290)
.|+-... .+..+..+.+.|+++|.++...
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 8875432 1346788899999999998763
No 490
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.33 E-value=0.27 Score=42.24 Aligned_cols=93 Identities=19% Similarity=0.189 Sum_probs=60.1
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879 106 GPETNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 182 (290)
Q Consensus 106 ~~~~~vlI~Ga-g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 182 (290)
-.+.+|+|+|+ |.+|..+++.+. ..|.+.++.+.+++++.+.+. +++...+ .+ +.+. -...|
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~----l~~~----l~~aD 217 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LS----LEEA----LPEAD 217 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------Hh----HHHH----HccCC
Confidence 36789999998 999999888886 457767888888877766543 3431111 11 2222 13589
Q ss_pred EEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879 183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213 (290)
Q Consensus 183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 213 (290)
+|+.+++.+..+..-...+++.-.++.++.+
T Consensus 218 iVv~~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 218 IVVWVASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred EEEECCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 9999998754321222455666777777754
No 491
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.33 E-value=0.51 Score=44.35 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=64.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
.++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|... +.-|..+.+ .+++ .+-...|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v-~~GDat~~~---~L~~---agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKV-FYGDATRMD---LLES---AGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeE-EEEeCCCHH---HHHh---cCCCcCCEEEEE
Confidence 3689999999999999999999999 5899999999999999887643 322222222 2332 244578999999
Q ss_pred cCCHHHHHH---HHHHhccCCEEE
Q 022879 188 AGLNKTMST---ALGATCAGGKVC 208 (290)
Q Consensus 188 ~g~~~~~~~---~~~~l~~~G~~v 208 (290)
++.++.-.. ..+.+.|+-+++
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~ii 495 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQII 495 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEE
Confidence 987543222 333444554444
No 492
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.33 E-value=0.41 Score=32.16 Aligned_cols=84 Identities=18% Similarity=0.319 Sum_probs=52.9
Q ss_pred ECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE---EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 190 (290)
Q Consensus 114 ~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 190 (290)
.|+| .|..+..+++. +...+++++.+++..+.+++..... ....+. .++ ....+.||+|+....-
T Consensus 3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~--~~l--------~~~~~sfD~v~~~~~~ 70 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDA--EDL--------PFPDNSFDVVFSNSVL 70 (95)
T ss_dssp ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBT--TSS--------SS-TT-EEEEEEESHG
T ss_pred ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehH--HhC--------ccccccccccccccce
Confidence 3555 48888888888 4448999999999888887754222 222111 111 0124579999774322
Q ss_pred ------HHHHHHHHHHhccCCEEEE
Q 022879 191 ------NKTMSTALGATCAGGKVCL 209 (290)
Q Consensus 191 ------~~~~~~~~~~l~~~G~~v~ 209 (290)
...+..+.+.|+++|+++.
T Consensus 71 ~~~~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 71 HHLEDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp GGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeccCHHHHHHHHHHHcCcCeEEeC
Confidence 2467889999999999873
No 493
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.32 E-value=1.3 Score=39.52 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=61.7
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE-EEecCCCcccHHHHHHHHHHH
Q 022879 102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEKIQKA 176 (290)
Q Consensus 102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...+++|++||=.|+|+ |..+..+++.++...+++++.++++.+.++ .+|... +........+. ..+ .
T Consensus 233 ~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~----~~~--~ 305 (426)
T TIGR00563 233 WLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGP----SQW--A 305 (426)
T ss_pred HhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccc----ccc--c
Confidence 34678899999887654 445556666655337999999999877663 456541 21111111110 000 0
Q ss_pred hCCCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCEEEEe
Q 022879 177 MGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV 210 (290)
Q Consensus 177 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 210 (290)
....||.||- |+|. ...+..+++.|+++|+++..
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1346999874 4442 13566788899999999865
No 494
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.29 E-value=0.56 Score=37.94 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=53.8
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 187 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 187 (290)
+++|.|+|.+|...++.+...|. .|+.++.++++.+. +. +++.. ++.-+..++ +.+++ .+-..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~---~~L~~---agi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATDE---DVLEE---AGIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCCH---HHHHh---cCCCcCCEEEEe
Confidence 57889999999999999999999 58999999998776 33 35543 333233222 33443 355789999999
Q ss_pred cCCH
Q 022879 188 AGLN 191 (290)
Q Consensus 188 ~g~~ 191 (290)
+|..
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9973
No 495
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.28 E-value=0.35 Score=41.06 Aligned_cols=78 Identities=21% Similarity=0.147 Sum_probs=49.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH---HHHHHHcC-CC-EEEecCCCcccHHHHHHHHHHHhCCC
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR---LSVAKEIG-AD-NIVKVSTNLQDIAEEVEKIQKAMGTG 180 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
.+.+|+|+|| |-+|...+..+-..|+ .|.++.++++. .+.+++|. +. ....+..+-.+..+.-+.+ .|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai-----~g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI-----DG 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH-----hC
Confidence 5678999998 9999999999999999 57777677655 34566665 11 1111112112222222222 46
Q ss_pred ccEEEEccCC
Q 022879 181 IDVSFDCAGL 190 (290)
Q Consensus 181 ~d~vid~~g~ 190 (290)
.|.||.++..
T Consensus 79 cdgVfH~Asp 88 (327)
T KOG1502|consen 79 CDGVFHTASP 88 (327)
T ss_pred CCEEEEeCcc
Confidence 9999997754
No 496
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.26 E-value=0.36 Score=41.23 Aligned_cols=37 Identities=19% Similarity=-0.000 Sum_probs=29.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879 107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR 144 (290)
Q Consensus 107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~ 144 (290)
.+.+|||+|+ |.+|...++.+...|. .|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4679999987 9999999998888899 46655555443
No 497
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.25 E-value=0.22 Score=41.12 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=49.5
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 189 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 189 (290)
+|||.|+++-|...+..+...|. .|++...++...+.+...|...++.- . -+-. .+.++. ...++|+|+|++.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g-~--l~~~-~l~~~l--~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTG-A--LDPQ-ELREFL--KRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEEC-C--CCHH-HHHHHH--HhcCCCEEEEcCC
Confidence 68999885559988887777898 57777788777776666665555431 1 1212 243332 3467999999988
Q ss_pred C
Q 022879 190 L 190 (290)
Q Consensus 190 ~ 190 (290)
.
T Consensus 75 P 75 (256)
T TIGR00715 75 P 75 (256)
T ss_pred H
Confidence 5
No 498
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.18 E-value=1.2 Score=30.38 Aligned_cols=85 Identities=20% Similarity=0.247 Sum_probs=52.8
Q ss_pred eEEEECCCHHHHHHHHHHHHCC---CCeEE-EEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879 110 NVLIMGAGPIGLVTMLAARAFG---APRIV-IVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g---~~~vv-~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
+|.|.|+|.+|.+.++-+...| . .+. +.++++++.+.+ ++++..... .+..+.++ ..|+|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~--------~advv 65 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ--------EADVV 65 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH--------HTSEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc--------cCCEE
Confidence 4677899999999999888888 6 455 548888887655 566644321 12222322 36999
Q ss_pred EEccCCHHHHHHHHHH---hccCCEEEEe
Q 022879 185 FDCAGLNKTMSTALGA---TCAGGKVCLV 210 (290)
Q Consensus 185 id~~g~~~~~~~~~~~---l~~~G~~v~~ 210 (290)
|-|+..+ .+...++. ..++..++.+
T Consensus 66 ilav~p~-~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence 9999864 44444433 4455555554
No 499
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.17 E-value=1.2 Score=35.60 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=57.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879 105 IGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183 (290)
Q Consensus 105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 183 (290)
++++++||=.|+|+ |..+..+++..+. ..|++++.++.. .+..-.++.-+-.+......+.+. .....+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~~~~~~~~~i~~~--~~~~~~D~ 120 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDFRDELVLKALLER--VGDSKVQV 120 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCCCChHHHHHHHHH--hCCCCCCE
Confidence 57888888888755 5555566666553 279999887621 121112232221111212222221 13567999
Q ss_pred EEEcc-----CC------------HHHHHHHHHHhccCCEEEEec
Q 022879 184 SFDCA-----GL------------NKTMSTALGATCAGGKVCLVG 211 (290)
Q Consensus 184 vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 211 (290)
|+... |. ...+..+.+.|+++|.++..-
T Consensus 121 V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~ 165 (209)
T PRK11188 121 VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKV 165 (209)
T ss_pred EecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 98644 21 124677888999999998753
No 500
>PRK08309 short chain dehydrogenase; Provisional
Probab=94.16 E-value=2 Score=33.27 Aligned_cols=93 Identities=8% Similarity=0.015 Sum_probs=50.3
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC---CEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA---DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 184 (290)
Q Consensus 110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 184 (290)
+++|.|++++|...++.+...|+ .|.++++++++.+.+.. ++. ...+..+- +.+++...++...+ ..+++|++
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~-~~g~id~l 79 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGF-HVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIE-KNGPFDLA 79 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcCCCeEE
Confidence 57889874555556665566799 56666777766554332 321 11221122 22344444544433 23578999
Q ss_pred EEccCCHHHHHHHHHHhccCC
Q 022879 185 FDCAGLNKTMSTALGATCAGG 205 (290)
Q Consensus 185 id~~g~~~~~~~~~~~l~~~G 205 (290)
|+.+-. ..-.......+..|
T Consensus 80 v~~vh~-~~~~~~~~~~~~~g 99 (177)
T PRK08309 80 VAWIHS-SAKDALSVVCRELD 99 (177)
T ss_pred EEeccc-cchhhHHHHHHHHc
Confidence 998775 33344444444444
Done!