Your job contains 1 sequence.
>022883
MHAFNLSSINVSTEFNATRRRRCLSYNNSLDLEYGRRRRVGRGCKDLTRTYGIVACVGGG
GGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPI
FRLRRLMKEAVAEERFEDAARYRDKLKEIAPNSLLKCLSDATTLGIRVQVRSVYIEDRSQ
PLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFE
YSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMGDDSDSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022883
(290 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8EB92 - symbol:apaG "Protein ApaG" species:211... 276 4.2e-24 1
TIGR_CMR|SO_3640 - symbol:SO_3640 "apaG protein" species:... 276 4.2e-24 1
UNIPROTKB|Q60C69 - symbol:apaG "Protein ApaG" species:243... 259 2.6e-22 1
UNIPROTKB|Q0BYU0 - symbol:apaG "ApaG protein" species:228... 249 3.0e-21 1
UNIPROTKB|Q2GFG4 - symbol:apaG "Protein ApaG" species:205... 249 3.0e-21 1
TIGR_CMR|ECH_1033 - symbol:ECH_1033 "apaG protein" specie... 249 3.0e-21 1
UNIPROTKB|Q9KUS3 - symbol:apaG "Protein ApaG" species:243... 245 8.0e-21 1
TIGR_CMR|VC_0442 - symbol:VC_0442 "apaG protein" species:... 245 8.0e-21 1
UNIPROTKB|Q2GIY5 - symbol:apaG "ApaG protein" species:212... 236 7.2e-20 1
TIGR_CMR|APH_1120 - symbol:APH_1120 "apaG protein" specie... 236 7.2e-20 1
FB|FBgn0037329 - symbol:CG12162 species:7227 "Drosophila ... 217 3.0e-17 1
UNIPROTKB|A6H7H7 - symbol:FBXO3 "F-box only protein 3" sp... 201 2.2e-15 1
UNIPROTKB|Q9UK99 - symbol:FBXO3 "F-box only protein 3" sp... 201 2.2e-15 1
MGI|MGI:1929084 - symbol:Fbxo3 "F-box protein 3" species:... 201 2.3e-15 1
RGD|1593433 - symbol:Fbxo3 "F-box protein 3" species:1011... 201 2.3e-15 1
ZFIN|ZDB-GENE-030131-5881 - symbol:poldip2 "polymerase (D... 191 1.0e-13 1
UNIPROTKB|F1NNL9 - symbol:TSR1 "Uncharacterized protein" ... 188 2.7e-13 1
ZFIN|ZDB-GENE-040212-1 - symbol:smtnl "smoothelin, like" ... 191 4.5e-13 1
RGD|1307022 - symbol:Poldip2 "polymerase (DNA-directed), ... 186 6.4e-13 1
UNIPROTKB|A5D9H9 - symbol:POLDIP2 "Polymerase (DNA-direct... 186 6.4e-13 1
UNIPROTKB|E2QVV7 - symbol:POLDIP2 "Uncharacterized protei... 186 6.4e-13 1
UNIPROTKB|Q9Y2S7 - symbol:POLDIP2 "Polymerase delta-inter... 186 6.4e-13 1
MGI|MGI:1915061 - symbol:Poldip2 "polymerase (DNA-directe... 186 6.4e-13 1
UNIPROTKB|I3LMX3 - symbol:POLDIP2 "Uncharacterized protei... 186 6.6e-13 1
ZFIN|ZDB-GENE-050522-269 - symbol:fbxo3 "F-box protein 3"... 184 2.3e-12 1
DICTYBASE|DDB_G0282285 - symbol:DDB_G0282285 "ApaG domain... 174 7.0e-11 1
TAIR|locus:2198826 - symbol:SKIP16 "SKP1/ASK-interacting ... 131 6.6e-06 1
>UNIPROTKB|Q8EB92 [details] [associations]
symbol:apaG "Protein ApaG" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/119 (47%), Positives = 74/119 (62%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
IRV+V++ YIE +S P +Y F+Y + I N E+ +L RHWIITDANGKT + G G
Sbjct: 8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAG 67
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 284
V+GE P I PNT+++Y+S L TP G M G + M V G FN I PF L+T G
Sbjct: 68 VVGETPTIPPNTAYQYTSGTVLDTPFGIMYGTYGM--VSESGEH-FNAIIKPFRLATPG 123
>TIGR_CMR|SO_3640 [details] [associations]
symbol:SO_3640 "apaG protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/119 (47%), Positives = 74/119 (62%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
IRV+V++ YIE +S P +Y F+Y + I N E+ +L RHWIITDANGKT + G G
Sbjct: 8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAG 67
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 284
V+GE P I PNT+++Y+S L TP G M G + M V G FN I PF L+T G
Sbjct: 68 VVGETPTIPPNTAYQYTSGTVLDTPFGIMYGTYGM--VSESGEH-FNAIIKPFRLATPG 123
>UNIPROTKB|Q60C69 [details] [associations]
symbol:apaG "Protein ApaG" species:243233 "Methylococcus
capsulatus str. Bath" [GO:0003674 "molecular_function" evidence=ND]
EMBL:AE017282 RefSeq:YP_112776.1 HSSP:Q7VU61
ProteinModelPortal:Q60C69 SMR:Q60C69 GeneID:3104089
GenomeReviews:AE017282_GR KEGG:mca:MCA0241 PATRIC:22604217
eggNOG:COG2967 HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT
ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 Uniprot:Q60C69
Length = 126
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 51/116 (43%), Positives = 73/116 (62%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
++V+V++VY+ + S+P QY FAY V + N P +LL R WIITDANGKT ++G G
Sbjct: 8 LKVEVKAVYLREHSRPDAHQYTFAYTVTMENTGTVPAKLLGRRWIITDANGKTVEVVGEG 67
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 281
V+GE P + P +FEY+SA ++TP G M G +++ D F IA FSL+
Sbjct: 68 VVGEHPYLRPGEAFEYTSAATIATPVGSMHGSYQLIADD---GMPFEAPIAAFSLA 120
>UNIPROTKB|Q0BYU0 [details] [associations]
symbol:apaG "ApaG protein" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CP000158
GenomeReviews:CP000158_GR RefSeq:YP_761353.1
ProteinModelPortal:Q0BYU0 STRING:Q0BYU0 GeneID:4288594
KEGG:hne:HNE_2671 PATRIC:32218209
BioCyc:HNEP228405:GI69-2681-MONOMER Uniprot:Q0BYU0
Length = 138
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 50/129 (38%), Positives = 79/129 (61%)
Query: 160 DATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTE 219
+A T G+R++VR ++ D S+P + ++ + Y V + N S+R ++RRHW I D+ G+ +
Sbjct: 11 EAITDGVRIRVRPKFLHDESEPTRAKFMWQYTVEVENESDRTWTIIRRHWRIVDSAGRLQ 70
Query: 220 NILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAP-F 278
+ G GVIG+ P + P F Y+S PL+TPSG M G +++ VD G + VA+ P F
Sbjct: 71 AVDGEGVIGQTPTVGPGQRFSYTSGAPLATPSGMMTGTYDL--VDDAGEEM--VAMIPAF 126
Query: 279 SLSTMGDDS 287
SL + D S
Sbjct: 127 SLDSPYDTS 135
>UNIPROTKB|Q2GFG4 [details] [associations]
symbol:apaG "Protein ApaG" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 51/117 (43%), Positives = 72/117 (61%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
I V+V Y+E++S P + Y + Y +R+ N S VQLLRR W I D+ G + G+G
Sbjct: 12 IEVKVVPSYLEEQSAPHENCYIWLYNIRVKNKSNSTVQLLRRSWKIIDSTGVINEVTGLG 71
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 282
VIG+QPV+ P FEY+S LSTPSG M G+++ +D +Q F V+I FSL +
Sbjct: 72 VIGKQPVLKPGEFFEYTSGAYLSTPSGMMHGEYQF--MDEDAAQVFYVSIPMFSLDS 126
>TIGR_CMR|ECH_1033 [details] [associations]
symbol:ECH_1033 "apaG protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 51/117 (43%), Positives = 72/117 (61%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
I V+V Y+E++S P + Y + Y +R+ N S VQLLRR W I D+ G + G+G
Sbjct: 12 IEVKVVPSYLEEQSAPHENCYIWLYNIRVKNKSNSTVQLLRRSWKIIDSTGVINEVTGLG 71
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 282
VIG+QPV+ P FEY+S LSTPSG M G+++ +D +Q F V+I FSL +
Sbjct: 72 VIGKQPVLKPGEFFEYTSGAYLSTPSGMMHGEYQF--MDEDAAQVFYVSIPMFSLDS 126
>UNIPROTKB|Q9KUS3 [details] [associations]
symbol:apaG "Protein ApaG" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1
PDB:1XVS PDBsum:1XVS ProteinModelPortal:Q9KUS3 SMR:Q9KUS3
DNASU:2615774 GeneID:2615774 KEGG:vch:VC0442 PATRIC:20079963
EvolutionaryTrace:Q9KUS3 Uniprot:Q9KUS3
Length = 126
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 52/116 (44%), Positives = 74/116 (63%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
I++QV++ YIE++S P ++ FAY + I N S + VQL+ R W+ITDA+GK + G G
Sbjct: 8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDG 67
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 281
V+GEQP I N + YSS L TP G M+G + M +D G ++F V I PF L+
Sbjct: 68 VVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLM--IDEQG-ESFTVEIEPFRLA 120
>TIGR_CMR|VC_0442 [details] [associations]
symbol:VC_0442 "apaG protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967 KO:K06195
OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1 PDB:1XVS PDBsum:1XVS
ProteinModelPortal:Q9KUS3 SMR:Q9KUS3 DNASU:2615774 GeneID:2615774
KEGG:vch:VC0442 PATRIC:20079963 EvolutionaryTrace:Q9KUS3
Uniprot:Q9KUS3
Length = 126
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 52/116 (44%), Positives = 74/116 (63%)
Query: 166 IRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVG 225
I++QV++ YIE++S P ++ FAY + I N S + VQL+ R W+ITDA+GK + G G
Sbjct: 8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDG 67
Query: 226 VIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 281
V+GEQP I N + YSS L TP G M+G + M +D G ++F V I PF L+
Sbjct: 68 VVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLM--IDEQG-ESFTVEIEPFRLA 120
>UNIPROTKB|Q2GIY5 [details] [associations]
symbol:apaG "ApaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 55/133 (41%), Positives = 75/133 (56%)
Query: 153 SLLKCLSDATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIIT 212
++L+C +A I V+V Y+E+ S P + Y + Y VRI N S+ VQLL+R W I
Sbjct: 2 TVLECGKEAGL--IEVEVTPSYLEEHSIPHENCYIWLYSVRINNRSDSTVQLLKRSWKII 59
Query: 213 DANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFN 272
D+ G + G GV G QPV+ P FEY+S LSTPSG M G ++ VD +Q F
Sbjct: 60 DSKGVVNEVSGSGVAGSQPVLKPGAFFEYTSGTCLSTPSGVMNGWYQF--VDEDKAQVFY 117
Query: 273 VAIAPFSLSTMGD 285
V + FSL + D
Sbjct: 118 VDVPAFSLDSPYD 130
>TIGR_CMR|APH_1120 [details] [associations]
symbol:APH_1120 "apaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 55/133 (41%), Positives = 75/133 (56%)
Query: 153 SLLKCLSDATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIIT 212
++L+C +A I V+V Y+E+ S P + Y + Y VRI N S+ VQLL+R W I
Sbjct: 2 TVLECGKEAGL--IEVEVTPSYLEEHSIPHENCYIWLYSVRINNRSDSTVQLLKRSWKII 59
Query: 213 DANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFN 272
D+ G + G GV G QPV+ P FEY+S LSTPSG M G ++ VD +Q F
Sbjct: 60 DSKGVVNEVSGSGVAGSQPVLKPGAFFEYTSGTCLSTPSGVMNGWYQF--VDEDKAQVFY 117
Query: 273 VAIAPFSLSTMGD 285
V + FSL + D
Sbjct: 118 VDVPAFSLDSPYD 130
>FB|FBgn0037329 [details] [associations]
symbol:CG12162 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
SMART:SM00992 EMBL:AE014297 GO:GO:0003677 eggNOG:COG2967
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GeneTree:ENSGT00390000010198
RefSeq:NP_730934.1 UniGene:Dm.23300 ProteinModelPortal:Q8IPQ6
SMR:Q8IPQ6 PaxDb:Q8IPQ6 PRIDE:Q8IPQ6 EnsemblMetazoa:FBtr0078681
GeneID:40655 KEGG:dme:Dmel_CG12162 UCSC:CG12162-RB
FlyBase:FBgn0037329 InParanoid:Q8IPQ6 OMA:YDRDLHN OrthoDB:EOG47M0D7
PhylomeDB:Q8IPQ6 ChiTaRS:CG12162 GenomeRNAi:40655 NextBio:819872
ArrayExpress:Q8IPQ6 Bgee:Q8IPQ6 Uniprot:Q8IPQ6
Length = 431
Score = 217 (81.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 47/126 (37%), Positives = 68/126 (53%)
Query: 162 TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENI 221
TT +R+ V Y+ R P Y++ Y +R+ N E VQL RHW I +G E +
Sbjct: 289 TTENVRITVIPFYMGCRETPASSVYWWRYCIRLENLGELSVQLRERHWRIFSLSGTLETV 348
Query: 222 LGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 280
G GV+G++P++ P +F+YSS L PSG M G F ++ D +F+ I PFSL
Sbjct: 349 RGRGVVGQEPILSPRLPAFQYSSHVSLQAPSGHMWGTFRLERED---GYSFDCKIPPFSL 405
Query: 281 STMGDD 286
+ DD
Sbjct: 406 ESKPDD 411
>UNIPROTKB|A6H7H7 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005634 SUPFAM:SSF81383
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:BC146250 IPI:IPI00690261
RefSeq:NP_001092532.1 UniGene:Bt.91417 ProteinModelPortal:A6H7H7
Ensembl:ENSBTAT00000013287 GeneID:534287 KEGG:bta:534287 CTD:26273
GeneTree:ENSGT00390000009225 HOGENOM:HOG000232174
HOVERGEN:HBG005647 InParanoid:A6H7H7 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 NextBio:20876340 InterPro:IPR018958 SMART:SM00860
Uniprot:A6H7H7
Length = 469
Score = 201 (75.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 49/125 (39%), Positives = 67/125 (53%)
Query: 161 ATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNS----ERPVQLLRRHWIITDANG 216
ATT I V V + ++ + S YFF YR+RI + E+ QL R+W IT+A G
Sbjct: 279 ATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKG 338
Query: 217 KTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIA 276
E + G GV+GE P+I P +EY+S ST SG MEG + H + FNVAI
Sbjct: 339 DVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTF-HFLYFKDKIFNVAIP 397
Query: 277 PFSLS 281
F ++
Sbjct: 398 RFHMA 402
>UNIPROTKB|Q9UK99 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016567 "protein ubiquitination" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 Reactome:REACT_6900 EMBL:CH471064 GO:GO:0006508
SUPFAM:SSF81383 GO:GO:0004842 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
CTD:26273 HOGENOM:HOG000232174 HOVERGEN:HBG005647 KO:K10290
OMA:DLGRYIQ OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860
EMBL:AK001943 EMBL:AK128454 EMBL:AL136625 EMBL:AC113192
EMBL:AL049629 EMBL:BC046110 EMBL:AF176702 IPI:IPI00296789
IPI:IPI00472624 IPI:IPI00969390 RefSeq:NP_036307.2
RefSeq:NP_208385.1 UniGene:Hs.406787 ProteinModelPortal:Q9UK99
SMR:Q9UK99 IntAct:Q9UK99 STRING:Q9UK99 PhosphoSite:Q9UK99
DMDM:145559474 PaxDb:Q9UK99 PRIDE:Q9UK99 DNASU:26273
Ensembl:ENST00000265651 Ensembl:ENST00000448981
Ensembl:ENST00000530401 GeneID:26273 KEGG:hsa:26273 UCSC:uc001muy.3
UCSC:uc001mva.1 UCSC:uc001mvb.1 GeneCards:GC11M033762
HGNC:HGNC:13582 MIM:609089 neXtProt:NX_Q9UK99 PharmGKB:PA28040
InParanoid:Q9UK99 PhylomeDB:Q9UK99 GenomeRNAi:26273 NextBio:48571
ArrayExpress:Q9UK99 Bgee:Q9UK99 CleanEx:HS_FBXO3
Genevestigator:Q9UK99 GermOnline:ENSG00000110429 Uniprot:Q9UK99
Length = 471
Score = 201 (75.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 49/125 (39%), Positives = 67/125 (53%)
Query: 161 ATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNS----ERPVQLLRRHWIITDANG 216
ATT I V V + ++ + S YFF YR+RI + E+ QL R+W IT+A G
Sbjct: 279 ATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKG 338
Query: 217 KTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIA 276
E + G GV+GE P+I P +EY+S ST SG MEG + H + FNVAI
Sbjct: 339 DVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTF-HFLYFKDKIFNVAIP 397
Query: 277 PFSLS 281
F ++
Sbjct: 398 RFHMA 402
>MGI|MGI:1929084 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1929084 GO:GO:0005634
SUPFAM:SSF81383 EMBL:CH466519 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
EMBL:BX640578 CTD:26273 GeneTree:ENSGT00390000009225
HOVERGEN:HBG005647 KO:K10290 OMA:DLGRYIQ OrthoDB:EOG4GF3F9
InterPro:IPR018958 SMART:SM00860 EMBL:AF233226 EMBL:AK004544
EMBL:AK019550 EMBL:AK028048 EMBL:AK031428 EMBL:AK049870
EMBL:AK050195 EMBL:AK151130 EMBL:AK151857 EMBL:AK152780
EMBL:AK167075 EMBL:BC010212 EMBL:BC058253 IPI:IPI00120202
IPI:IPI00410808 IPI:IPI00753481 RefSeq:NP_065618.1
RefSeq:NP_997598.1 UniGene:Mm.143768 ProteinModelPortal:Q9DC63
SMR:Q9DC63 STRING:Q9DC63 PhosphoSite:Q9DC63 PaxDb:Q9DC63
PRIDE:Q9DC63 Ensembl:ENSMUST00000028603 Ensembl:ENSMUST00000102565
Ensembl:ENSMUST00000111135 GeneID:57443 KEGG:mmu:57443
UCSC:uc008lji.1 UCSC:uc008ljk.1 InParanoid:Q3U9C1 ChiTaRS:FBXO3
NextBio:313845 Bgee:Q9DC63 CleanEx:MM_FBXO3 Genevestigator:Q9DC63
GermOnline:ENSMUSG00000027180 Uniprot:Q9DC63
Length = 480
Score = 201 (75.8 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 49/125 (39%), Positives = 67/125 (53%)
Query: 161 ATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNS----ERPVQLLRRHWIITDANG 216
ATT I V V + ++ + S YFF YR+RI + E+ QL R+W IT+A G
Sbjct: 279 ATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSRDALPEKACQLDSRYWRITNAKG 338
Query: 217 KTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIA 276
E + G GV+GE P+I P +EY+S ST SG MEG + H + FNVAI
Sbjct: 339 DVEEVQGPGVVGEFPIISPGRIYEYTSCTTFSTTSGYMEGYYTF-HFLYFKDKVFNVAIP 397
Query: 277 PFSLS 281
F ++
Sbjct: 398 RFHMA 402
>RGD|1593433 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 RGD:1593433 GO:GO:0005634
SUPFAM:SSF81383 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CH473949 CTD:26273
GeneTree:ENSGT00390000009225 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860 IPI:IPI00210722
RefSeq:NP_001103076.1 UniGene:Rn.201745 PRIDE:D4ABP9
Ensembl:ENSRNOT00000014478 GeneID:690634 KEGG:rno:690634
UCSC:RGD:1593433 NextBio:741350 Uniprot:D4ABP9
Length = 480
Score = 201 (75.8 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 49/125 (39%), Positives = 67/125 (53%)
Query: 161 ATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNS----ERPVQLLRRHWIITDANG 216
ATT I V V + ++ + S YFF YR+RI + E+ QL R+W IT+A G
Sbjct: 279 ATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSRDALPEKACQLDSRYWRITNAKG 338
Query: 217 KTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIA 276
E + G GV+GE P+I P +EY+S ST SG MEG + H + FNVAI
Sbjct: 339 DVEEVQGPGVVGEFPIISPGRIYEYTSCTTFSTTSGYMEGYYTF-HFLYFKDKVFNVAIP 397
Query: 277 PFSLS 281
F ++
Sbjct: 398 RFHMA 402
>ZFIN|ZDB-GENE-030131-5881 [details] [associations]
symbol:poldip2 "polymerase (DNA-directed), delta
interacting protein 2" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
ZFIN:ZDB-GENE-030131-5881 GO:GO:0003677 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
SUPFAM:SSF141255 HOVERGEN:HBG053549 EMBL:BC045382 IPI:IPI00817709
UniGene:Dr.78022 ProteinModelPortal:Q7ZVW6 InParanoid:Q7ZVW6
ArrayExpress:Q7ZVW6 Uniprot:Q7ZVW6
Length = 376
Score = 191 (72.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 51/129 (39%), Positives = 67/129 (51%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 238 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSL 297
Query: 215 NGKTENILGVGVIGEQPVIL-PNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G++PV+ +F+YSS L PSG M G F + D GS F+V
Sbjct: 298 SGTLETVRGRGVVGKEPVLSREQPAFQYSSHVSLQAPSGHMWGTFCFERTD--GSH-FDV 354
Query: 274 AIAPFSLST 282
I PFSL +
Sbjct: 355 RIPPFSLES 363
>UNIPROTKB|F1NNL9 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:AADN02025881
IPI:IPI00883100 Ensembl:ENSGALT00000005087 Uniprot:F1NNL9
Length = 349
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 211 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSEVVQLRERHWRIFSL 270
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 271 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 327
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 328 RIPPFSLESNKDE 340
>ZFIN|ZDB-GENE-040212-1 [details] [associations]
symbol:smtnl "smoothelin, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003779 "actin
binding" evidence=IDA] [GO:0043009 "chordate embryonic development"
evidence=IMP] InterPro:IPR001715 InterPro:IPR011722 Pfam:PF00307
PROSITE:PS50021 SMART:SM00033 SMART:SM00992 ZFIN:ZDB-GENE-040212-1
GO:GO:0003779 GO:GO:0003677 Gene3D:1.10.418.10 SUPFAM:SSF47576
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0043009
GeneTree:ENSGT00530000062761 SUPFAM:SSF141255 EMBL:CR524483
EMBL:CR457447 IPI:IPI00993558 Ensembl:ENSDART00000130370
Bgee:E7F6Q9 Uniprot:E7F6Q9
Length = 766
Score = 191 (72.3 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 51/129 (39%), Positives = 67/129 (51%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 628 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSL 687
Query: 215 NGKTENILGVGVIGEQPVIL-PNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G++PV+ +F+YSS L PSG M G F + D GS F+V
Sbjct: 688 SGTLETVRGRGVVGKEPVLSREQPAFQYSSHVSLQAPSGHMWGTFCFERTD--GSH-FDV 744
Query: 274 AIAPFSLST 282
I PFSL +
Sbjct: 745 RIPPFSLES 753
>RGD|1307022 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 IPI:IPI01007599 Ensembl:ENSRNOT00000013100
Uniprot:E9PT51
Length = 367
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 229 LSDVHRETTESIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 288
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 289 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 345
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 346 RIPPFSLESNKDE 358
>UNIPROTKB|A5D9H9 [details] [associations]
symbol:POLDIP2 "Polymerase (DNA-directed), delta
interacting protein 2" species:9913 "Bos taurus" [GO:0070584
"mitochondrion morphogenesis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 HOVERGEN:HBG053549
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 OMA:LFERFLM
OrthoDB:EOG441QBM EMBL:DAAA02048600 EMBL:BC146200 EMBL:BT030598
IPI:IPI00694541 RefSeq:NP_001091572.1 UniGene:Bt.56102
Ensembl:ENSBTAT00000010675 GeneID:539673 KEGG:bta:539673
InParanoid:A5D9H9 NextBio:20878145 Uniprot:A5D9H9
Length = 368
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 230 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 289
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 290 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 346
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 347 RIPPFSLESNKDE 359
>UNIPROTKB|E2QVV7 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 GeneTree:ENSGT00390000010198 OMA:LFERFLM
EMBL:AAEX03006664 RefSeq:NP_001240832.1 UniGene:Cfa.26302
UniGene:Cfa.42286 Ensembl:ENSCAFT00000029631 GeneID:491162
KEGG:cfa:491162 NextBio:20864045 Uniprot:E2QVV7
Length = 368
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 230 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 289
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 290 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 346
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 347 RIPPFSLESNKDE 359
>UNIPROTKB|Q9Y2S7 [details] [associations]
symbol:POLDIP2 "Polymerase delta-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR011722 SMART:SM00992 EMBL:AF179891 GO:GO:0005634
GO:GO:0003677 GO:GO:0042645 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 CleanEx:HS_POLD4
SUPFAM:SSF141255 EMBL:AF077203 EMBL:AK313232 EMBL:BC000655
EMBL:BC009265 IPI:IPI00165506 RefSeq:NP_056399.1 UniGene:Hs.241543
ProteinModelPortal:Q9Y2S7 SMR:Q9Y2S7 IntAct:Q9Y2S7
MINT:MINT-1383241 PhosphoSite:Q9Y2S7 DMDM:50401206 PRIDE:Q9Y2S7
DNASU:26073 GeneID:26073 KEGG:hsa:26073 UCSC:uc002haz.3 CTD:26073
GeneCards:GC17M026673 HGNC:HGNC:23781 MIM:611519 neXtProt:NX_Q9Y2S7
PharmGKB:PA134866227 HOVERGEN:HBG053549 InParanoid:Q9Y2S7
GenomeRNAi:26073 NextBio:47983 CleanEx:HS_POLDIP2
Genevestigator:Q9Y2S7 GermOnline:ENSG00000004142 Uniprot:Q9Y2S7
Length = 368
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 230 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 289
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 290 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 346
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 347 RIPPFSLESNKDE 359
>MGI|MGI:1915061 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0030674 "protein binding,
bridging" evidence=ISA] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO] [GO:0070584 "mitochondrion morphogenesis"
evidence=IMP] InterPro:IPR011722 SMART:SM00992 MGI:MGI:1915061
GO:GO:0005739 GO:GO:0005634 GO:GO:0003677 GO:GO:0030674
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
CTD:26073 HOVERGEN:HBG053549 EMBL:BC006833 EMBL:BC012879
IPI:IPI00126634 RefSeq:NP_080665.1 UniGene:Mm.197493
UniGene:Mm.473921 ProteinModelPortal:Q91VA6 SMR:Q91VA6
STRING:Q91VA6 PhosphoSite:Q91VA6 PaxDb:Q91VA6 PRIDE:Q91VA6
Ensembl:ENSMUST00000001127 GeneID:67811 KEGG:mmu:67811
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 InParanoid:Q91VA6
OMA:LFERFLM OrthoDB:EOG441QBM ChiTaRS:POLDIP2 NextBio:325615
Bgee:Q91VA6 Genevestigator:Q91VA6 GermOnline:ENSMUSG00000001100
Uniprot:Q91VA6
Length = 368
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 230 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 289
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 290 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 346
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 347 RIPPFSLESNKDE 359
>UNIPROTKB|I3LMX3 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070584 "mitochondrion morphogenesis" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:FP565711
Ensembl:ENSSSCT00000023831 Uniprot:I3LMX3
Length = 370
Score = 186 (70.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 158 LSDA---TTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDA 214
LSD TT IRV V Y+ R Y++ Y +R+ N VQL RHW I
Sbjct: 232 LSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSL 291
Query: 215 NGKTENILGVGVIGEQPVILPNT-SFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNV 273
+G E + G GV+G +PV+ +F+YSS L SG M G F + D GS F+V
Sbjct: 292 SGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPD--GSH-FDV 348
Query: 274 AIAPFSLSTMGDD 286
I PFSL + D+
Sbjct: 349 RIPPFSLESNKDE 361
>ZFIN|ZDB-GENE-050522-269 [details] [associations]
symbol:fbxo3 "F-box protein 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:BX957256 IPI:IPI00504452
Ensembl:ENSDART00000139382 ZFIN:ZDB-GENE-050522-269
GeneTree:ENSGT00390000009225 Bgee:F1R287 Gene3D:2.60.40.1470
InterPro:IPR007474 InterPro:IPR018958 InterPro:IPR001810
Pfam:PF04379 SMART:SM00256 SMART:SM00860 SUPFAM:SSF110069
SUPFAM:SSF81383 PROSITE:PS51087 PROSITE:PS50181 Uniprot:F1R287
Length = 451
Score = 184 (69.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 47/129 (36%), Positives = 68/129 (52%)
Query: 156 KCLSDATTLGIRVQVRSVYIEDRSQPLKGQYFFAYRVRITNNS----ERPVQLLRRHWII 211
+C+ ATT I V V + ++ + S +FF YR+RI E+ QL R+W I
Sbjct: 272 RCV--ATTGDITVSVSTSFLPELSSVHPPHFFFTYRIRIEMAKSALPEKACQLDSRYWKI 329
Query: 212 TDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTF 271
T+ANG E + G GV+GE PV+ P EY+S ST S MEG + H + + F
Sbjct: 330 TNANGNVEEVRGPGVVGEFPVMTPGKVHEYASCTTFSTTSEYMEGHYTF-HRLKNKEEVF 388
Query: 272 NVAIAPFSL 280
+V+I F +
Sbjct: 389 DVSIPRFHM 397
>DICTYBASE|DDB_G0282285 [details] [associations]
symbol:DDB_G0282285 "ApaG domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001810 PROSITE:PS50181 dictyBase:DDB_G0282285
SUPFAM:SSF81383 EMBL:AAFI02000046 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
KO:K10290 RefSeq:XP_001733003.1 ProteinModelPortal:B0G139
EnsemblProtists:DDB0237866 GeneID:8623456 KEGG:ddi:DDB_G0282285
ProtClustDB:CLSZ2734183 Uniprot:B0G139
Length = 525
Score = 174 (66.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 45/129 (34%), Positives = 68/129 (52%)
Query: 160 DATTLGIRVQVRSVYI-EDRSQPLKGQYFFAYRVRIT-NNSERP---VQLLRRHWIITDA 214
+ T G++++ +VYI ED + Y F YRV I+ + E P QL R WII+
Sbjct: 402 EVVTQGVKIKCSAVYIPEDENS-----YTFFYRVTISMDKDEDPKNACQLTHRFWIISTI 456
Query: 215 NGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVA 274
+G + N+ G GVIG+ P+I P +FEY S C + G M G F M ++ +F
Sbjct: 457 DGSS-NVNGPGVIGKFPIIKPGVTFEYCSRCEIERSQGHMGGYFTMVKLNN-RDYSFRAT 514
Query: 275 IAPFSLSTM 283
+ F L+T+
Sbjct: 515 VPTFFLTTI 523
>TAIR|locus:2198826 [details] [associations]
symbol:SKIP16 "SKP1/ASK-interacting protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] [GO:0019243 "methylglyoxal
catabolic process to D-lactate" evidence=RCA] PROSITE:PS50181
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016567 EMBL:AC024174 GO:GO:0019005 HSSP:Q7VU61
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 KO:K10290 EMBL:AF419599
EMBL:AY099571 EMBL:BT002142 IPI:IPI00545043 PIR:D86196
RefSeq:NP_563759.1 UniGene:At.15468 ProteinModelPortal:Q9LND7
SMR:Q9LND7 IntAct:Q9LND7 STRING:Q9LND7 PaxDb:Q9LND7 PRIDE:Q9LND7
EnsemblPlants:AT1G06110.1 GeneID:837120 KEGG:ath:AT1G06110
TAIR:At1g06110 eggNOG:NOG296925 HOGENOM:HOG000243753
InParanoid:Q9LND7 OMA:VNVYLLP PhylomeDB:Q9LND7
ProtClustDB:CLSN2687703 Genevestigator:Q9LND7 Uniprot:Q9LND7
Length = 436
Score = 131 (51.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 141 RYRDKLKEIA--PNSLLKCLSDATTLGIRVQVRSVYIEDRSQPLKGQ---YFFAYRVR-- 193
R ++ +K I+ P C S + T G++V+ SV+I + S L+ Q Y++AY +R
Sbjct: 275 RQQNNVKSISLFPEIPPLC-SVSVTNGVQVRASSVFIPEISN-LRDQPPAYWYAYSIRMS 332
Query: 194 ------ITNNSERP-VQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTS-FEYSSAC 245
I N + QL RHW+I N +N+ G VIG+ P++ F Y S
Sbjct: 333 LMPEGCILNGTHHSSCQLYWRHWVIRADNEVIDNVNGEAVIGKYPLLQAGEEEFVYESCS 392
Query: 246 PLSTPSGRMEGDFEM---KHVDRVGSQTFNVAIAPFSL 280
T +G ++G F D GSQ F V + F L
Sbjct: 393 SFPTTAGSIDGSFTFVPGSLRDPKGSQ-FEVKVVEFPL 429
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 290 266 0.00094 114 3 11 22 0.46 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 590 (63 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.12u 0.11s 22.23t Elapsed: 00:00:01
Total cpu time: 22.12u 0.11s 22.23t Elapsed: 00:00:01
Start: Sat May 11 00:17:29 2013 End: Sat May 11 00:17:30 2013