BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022885
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 319
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 137/270 (50%), Gaps = 40/270 (14%)
Query: 28 ASSPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQD 87
A +PI P + M E +A +L + +LE ++S A +T + + D
Sbjct: 53 APAPIITPTLKEDMAYE---EAIAALKKLLSEKG--ELENEAASKVAQITSE-----LAD 102
Query: 88 GAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSET- 146
G + +K+ F+ FKK KY + + L+K Q+PKFMV AC+DSR PS
Sbjct: 103 GGTPSASYP-VQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVL 161
Query: 147 ----------------------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMR 178
AA+E+AV L+V+NI+VIGHS CGGI+ LM
Sbjct: 162 DFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 221
Query: 179 MQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWI 238
D + E+WV AK + A + +F +QC HCEKE+++ S+ NLLTYP++
Sbjct: 222 FPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFV 281
Query: 239 EERVRKELLFIHGGYYDLLNCTFEKWTLDY 268
+ + K+ L + GGYYD +N +FE W L+Y
Sbjct: 282 RDGLVKKTLALQGGYYDFVNGSFELWGLEY 311
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1
PE=1 SV=2
Length = 347
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 136/276 (49%), Gaps = 38/276 (13%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P S+ M E +A + +L +E T AA ++ +
Sbjct: 60 EPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLL-------IEKEELKTVAAAKVEQIT 112
Query: 83 YKVQDGAKS-CGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRN 141
+Q G S D E +KQ F+ FKK KY + LAK QSPK+MV AC+DSR
Sbjct: 113 AALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRV 172
Query: 142 GPSET-----------------------------NAALEFAVNTLEVQNILVIGHSDCGG 172
PS AA+E+AV L+V+NI+VIGHS CGG
Sbjct: 173 CPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGG 232
Query: 173 IQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNL 232
I+ LM D ++ E+WV AK + + +F+ QC CE+E+++ S+ NL
Sbjct: 233 IKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANL 292
Query: 233 LTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDY 268
LTYP++ E + K L + GGYYD + FE W L++
Sbjct: 293 LTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEF 328
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 321
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 133/277 (48%), Gaps = 42/277 (15%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P + M E A +L E AA D+ +
Sbjct: 47 EPVFAAPTPIINPILREEMAKESYEQAIAALEKLLS-------EKGELGPIAAARVDQIT 99
Query: 83 YKVQ--DGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR 140
++Q DG+K D E MK F+ FK KY + + L+K QSPKFMV AC+DSR
Sbjct: 100 AELQSSDGSKP---FDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSR 156
Query: 141 NGPSET-----------------------------NAALEFAVNTLEVQNILVIGHSDCG 171
PS AA+E+AV L+V+NI+VIGHS CG
Sbjct: 157 VCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACG 216
Query: 172 GIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILN 231
GI+ LM + D + E+WV AK + + F QC CEKE+++ S+ N
Sbjct: 217 GIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGN 276
Query: 232 LLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDY 268
LLTYP++ E + K+ L + GG+YD +N FE W L++
Sbjct: 277 LLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2
PE=1 SV=2
Length = 259
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 125/241 (51%), Gaps = 41/241 (17%)
Query: 57 LKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEE 116
LK + +K++ ++ AA + D S+ D E +K+ F++FKK KY
Sbjct: 23 LKDVAAAKVKKITAELQAASSSDSKSF------------DPVERIKEGFVTFKKEKYETN 70
Query: 117 LEHFQNLAKAQSPKFMVIACADSRNGPSET-----------------------------N 147
+ LAK QSPK+MV AC+DSR PS
Sbjct: 71 PALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVG 130
Query: 148 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAY 207
AA+E+AV L+V+NI+VIGHS CGGI+ LM D ++ E+WV AK + A
Sbjct: 131 AAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAE 190
Query: 208 TAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLD 267
+ +F+ QC CE+E+++ S+ NLLTYP++ E V K L + GGYYD +N +FE W L
Sbjct: 191 SESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQ 250
Query: 268 Y 268
+
Sbjct: 251 F 251
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
Length = 328
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 103/199 (51%), Gaps = 29/199 (14%)
Query: 99 EEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSE------------- 145
E +K FL FKK KY + + LAK QSP FMV AC+DSR PS
Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181
Query: 146 ----------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSL 189
T AA+E+AV L+V NI+VIGHS CGGI+ L+ D
Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDF 241
Query: 190 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFI 249
E WV AK + KA F + C HCEKE+++ S+ NLLTYP++ E + + L +
Sbjct: 242 IEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLAL 301
Query: 250 HGGYYDLLNCTFEKWTLDY 268
GGYYD + +FE W L++
Sbjct: 302 KGGYYDFVKGSFELWGLEF 320
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1
Length = 330
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 29/203 (14%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSET-------- 146
D E +K F+ FK K+ + LAK QSPKFMV AC+DSR PS
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 147 ---------------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 185
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 186 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 245
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNN 299
Query: 246 LLFIHGGYYDLLNCTFEKWTLDY 268
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2
Length = 330
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 103/203 (50%), Gaps = 29/203 (14%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSET-------- 146
D E +K F+ FK K+ + LAK QSPKFMV AC+DSR PS
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 147 ---------------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 185
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 186 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 245
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R +
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNK 299
Query: 246 LLFIHGGYYDLLNCTFEKWTLDY 268
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1
Length = 330
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 29/203 (14%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSET-------- 146
D E +K F+ FK K+ + LAK QSPKFMV AC+DSR PS
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 147 ---------------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 185
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 186 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 245
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNN 299
Query: 246 LLFIHGGYYDLLNCTFEKWTLDY 268
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1
Length = 329
Score = 144 bits (362), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 29/203 (14%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSET-------- 146
D E +K F+ FK K+ + LAK QSPKFMV AC+DSR PS
Sbjct: 119 FDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 178
Query: 147 ---------------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 185
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 179 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 238
Query: 186 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 245
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 239 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNN 298
Query: 246 LLFIHGGYYDLLNCTFEKWTLDY 268
L + GG+YD +N TFE W LD+
Sbjct: 299 TLALKGGHYDFVNGTFELWALDF 321
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 324
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 35/285 (12%)
Query: 15 SMAALKTSVESTFASSPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETS-----S 69
S ++K + T + PI G +T A + V R S + S
Sbjct: 38 STCSMKINSTCTLTALPIAALPGPRTTSHYSTAAANWCYATVAPRARSSTIAASLGTPAP 97
Query: 70 SSTAAALTRDRTSYKVQDGAKSCGGLDY-FEEMKQRFLSFKKNKYFEELEHFQNLAKAQS 128
SS+A+ + + VQ + +D E +K F FK Y ++ + F+ L Q+
Sbjct: 98 SSSASFRPKLIRTTPVQAAPVAPALMDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQA 157
Query: 129 PKFMVIACADSRNGPSET-----------------------------NAALEFAVNTLEV 159
PK+MV ACADSR PS T +A+E+AV L+V
Sbjct: 158 PKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKV 217
Query: 160 QNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRH 219
+ I+VIGHS CGGI+AL+ ++D D E+WV AK + + A + FD QC
Sbjct: 218 EVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTV 277
Query: 220 CEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKW 264
EKE+++ S+ NLLTYP+++E V L + GG+YD ++ FE W
Sbjct: 278 LEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1
Length = 190
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 29/178 (16%)
Query: 120 FQNLAKAQSPKFMVIACADSRNGPSE-----------------------------TNAAL 150
+ LAK QSPKF+V AC+DSR PS AA+
Sbjct: 5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAI 64
Query: 151 EFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAH 210
E+AV L+V+NI+VIGHS CGGI+ LM + DD E WV AK + KA +
Sbjct: 65 EYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNN 124
Query: 211 LSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDY 268
L F C CEKE+++ S+ NLLTYP++ + + + L + G +YD +N F+ W LD+
Sbjct: 125 LEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDF 182
>sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1
Length = 220
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR------------------------ 140
FL F+++ Y + F++LA Q+PK + IAC+DSR
Sbjct: 8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIV 67
Query: 141 ----NGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVN 196
P +A++E+AV L V +I+V GHSDCG + A+ +D ++ W+ +
Sbjct: 68 PGYGPQPGGVSASVEYAVAVLGVGDIVVCGHSDCGAMGAIASCA-CLDQLPAVA-GWLHH 125
Query: 197 AKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDL 256
A+ A+ A+ H S + + ++ + NL T+P + + + L +HG YD+
Sbjct: 126 AEAARAMNSAHE-HASEAARLDALVRHNVIAQLANLRTHPCVARALEQGRLNLHGWVYDI 184
>sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1
SV=1
Length = 219
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR----------------- 140
+E+ FL F++ + + F+ LA QSP+ + I+C+DSR
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 141 -----------NGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSL 189
P +A++E+AV L V +I++ GHS+CG + A+ Q +D ++
Sbjct: 61 RNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ-CMDHMPAV 119
Query: 190 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFI 249
+ +W+ A A+ +A H + +E++ + NL T+P + + + + +
Sbjct: 120 S-HWLRYADSARVVNEARP-HSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIAL 177
Query: 250 HGGYYDL 256
HG YD+
Sbjct: 178 HGWVYDI 184
>sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1
Length = 219
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR----------------- 140
+E+ FL F++ + + F+ LA QSP+ + I+C+DSR
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 141 -----------NGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSL 189
P +A++E+AV L V +I++ GHS+CG + A+ Q +D ++
Sbjct: 61 RNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ-CMDHMPAV 119
Query: 190 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFI 249
+ +W+ A A+ +A H + +E++ + NL T+P + + + + +
Sbjct: 120 S-HWLRYADSARVVNEARP-HSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIAL 177
Query: 250 HGGYYDL 256
HG YD+
Sbjct: 178 HGWVYDI 184
>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=icfA PE=1 SV=1
Length = 274
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 108 FKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGP-----SET-------NAA------ 149
F++ + + F+ L+ Q P+ + I C+DSR P SE NA
Sbjct: 11 FREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPY 70
Query: 150 ----------LEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKV 199
+E+A+ LE+ I+V GHS CG ++ L+++ + + + L +W+ + +
Sbjct: 71 GAANGGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL-NSLQEKLPLVYDWLKHTEA 129
Query: 200 AKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYY 254
+ +HL + E+I + NL TYP I R+ + L +HG Y
Sbjct: 130 TRRLVLDNYSHLEGEDLIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIY 184
>sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori (strain J99) GN=cynT PE=3
SV=1
Length = 221
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 32/181 (17%)
Query: 106 LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPS--------------------- 144
L F++N+Y E E +++L Q P + I+C DSR P+
Sbjct: 8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIP 67
Query: 145 ---------ETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD-VDSRQSLTENWV 194
T A++E+A+ + VQN+++ GHSDCG ++ + D+ ++ NW+
Sbjct: 68 PKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWI 127
Query: 195 VNAKVAKFRTKAYTAHLS-FDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGY 253
+ K K + + F ++ E+ + + NLL+Y +I+ERV L I G +
Sbjct: 128 QFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWH 187
Query: 254 Y 254
Y
Sbjct: 188 Y 188
>sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942)
GN=icfA PE=3 SV=1
Length = 272
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 108 FKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPS----------------------- 144
F+ + Y + F+ AK Q P+ + I C+DSR P+
Sbjct: 11 FRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPF 70
Query: 145 -----ETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKV 199
A++E+A+ L +++++V GHS CG ++ L+++ + + L +W+ +A+
Sbjct: 71 GAANGGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKL-NQLQEDMPLVYDWLQHAQA 129
Query: 200 AKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDL 256
+ + D E++ I NL TYP + R+ + L I G Y++
Sbjct: 130 TRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEV 186
>sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=can PE=1 SV=1
Length = 229
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 44/193 (22%)
Query: 98 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSE--TN----- 147
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSR P+E TN
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSR-VPAEKLTNLEPGE 59
Query: 148 -------------------AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQS 188
+ +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 60 LFVHRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKDLG 114
Query: 189 LTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNL-----LTYPWIEERVR 243
L NW+++ + F+ LS +++ K +++ + NL + W ER +
Sbjct: 115 LINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAW--ERGQ 172
Query: 244 KELLFIHGGYYDL 256
K L +HG YD+
Sbjct: 173 K--LSLHGWVYDV 183
>sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1
Length = 220
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 32/110 (29%)
Query: 120 FQNLAKAQSPKFMVIACADSRNGPSETNAALE--------------------------FA 153
F+ LA+AQ P+F+ I C+DSR P+E LE +A
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRV-PAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYA 84
Query: 154 VNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 203
V+ LEV++I++ GH CGG+QA + + L NW+++ + F+
Sbjct: 85 VDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFK 129
>sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1
SV=1
Length = 220
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 32/110 (29%)
Query: 120 FQNLAKAQSPKFMVIACADSRNGPSETNAALE--------------------------FA 153
F+ LA+AQ P+F+ I C+DSR P+E LE +A
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRV-PAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYA 84
Query: 154 VNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 203
V+ LEV++I++ GH CGG+QA + + L NW+++ + F+
Sbjct: 85 VDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFK 129
>sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=cynT PE=3 SV=1
Length = 221
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 32/181 (17%)
Query: 106 LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPS--------------------- 144
L F++N+Y E E +++L Q P + I+C DSR P+
Sbjct: 8 LEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNP 67
Query: 145 ---------ETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD-VDSRQSLTENWV 194
T A++E+A+ + VQN+++ GHSDCG ++ + D+ ++ NW+
Sbjct: 68 PKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWI 127
Query: 195 VNAKVAKFRTKAYTAHLS-FDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGY 253
+ K K + + F ++ E+ + + NLL+Y +I+E+ K L I G +
Sbjct: 128 QFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNELKIFGWH 187
Query: 254 Y 254
Y
Sbjct: 188 Y 188
>sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1805 PE=1
SV=2
Length = 228
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 66/225 (29%)
Query: 104 RFLSFKKNKYFE------------ELEHFQNLAKAQSPKFMVIACADSRNGPSE------ 145
R+L +K FE + E F LA QSP+++ I C+DSR +E
Sbjct: 12 RYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDA 71
Query: 146 -------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 186
+ + + +AV L+V++I+V GH +CGG+QA + D
Sbjct: 72 GEVFVHRNIANVVPTIDLSSMSVINYAVGHLKVKHIVVCGHYNCGGVQAALTPTD----- 126
Query: 187 QSLTENWVVNAK-VAKFRTKAYTA------------HLSFDQQCRHCEKESISRSILNLL 233
+ W+ N + V + K A L+ + CR K ++ +
Sbjct: 127 LGILNPWLRNIRDVYRLHEKELDAIEDDGERFNRLVELNVIESCRSVIKTAVVQQSYEEN 186
Query: 234 TYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDYKGRKVDEEEV 278
+P +HG ++L + + +D+ G D +++
Sbjct: 187 GFP-----------IVHGWVFNLKDGLLKDLNIDFPGILADIQKI 220
>sp|O53573|MTCA2_MYCTU Carbonic anhydrase 2 OS=Mycobacterium tuberculosis GN=mtcA2 PE=1
SV=1
Length = 207
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGP-------------- 143
+E +RF++ + + ++H LA Q P ++ CADSR
Sbjct: 13 LKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVV 72
Query: 144 --------SETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
S ++E+AV L V I+V+GH CG + A + +D
Sbjct: 73 RTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAIND 119
>sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NCE103 PE=1 SV=1
Length = 221
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 53/173 (30%)
Query: 124 AKAQSPKFMVIACADSRNG-------PSET-----------------NAALEFAVNTLEV 159
AK QSP + I C+DSR P E A LEFA+ L+V
Sbjct: 45 AKGQSPHTLFIGCSDSRYNENCLGVLPGEVFTWKNVANICHSEDLTLKATLEFAIICLKV 104
Query: 160 QNILVIGHSDCGGIQALMRMQ----------------DDVDSRQSLTENWVVNAKVAKFR 203
+++ GH+DCGGI+ + Q DD+D+ +++ K + +
Sbjct: 105 NKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQREK 164
Query: 204 TKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDL 256
+ Y +H + +Q +R I N P ++ V+ L ++G Y++
Sbjct: 165 SH-YLSHCNVKRQ--------FNRIIEN----PTVQTAVQNGELQVYGLLYNV 204
>sp|A0R566|CYNT_MYCS2 Carbonic anhydrase OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cynT PE=1 SV=1
Length = 206
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR----------------- 140
++ RF++ + + +E +L +AQ P +V C DSR
Sbjct: 13 LKDGNARFVAGQPLHPSQGIERRASLTQAQRPTAVVFGCGDSRVAAEILFDQGLGDMFVV 72
Query: 141 --NGPSETNAAL---EFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
G NA L E+AV L+V I+V+GH CG ++A + D+
Sbjct: 73 RTAGHVIDNAVLGSIEYAVTVLKVPLIVVLGHDSCGAVKATLSALDE 119
>sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBP8B7.05c PE=1 SV=2
Length = 328
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 92 CGGLDYFEEMK---QRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNG------ 142
G +D E+K +R L++ + + F Q+P+ + I C+DSR
Sbjct: 116 AGKIDQNGEIKDLLERNLTWSQQTSRKYPSFFTATKDIQTPQVLWIGCSDSRVPETTILN 175
Query: 143 --PSET-----------------NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDV 183
P E A +E++V L+V++I+V GH CGG+ A +
Sbjct: 176 LLPGEVFVHRNIANVVPRSDINALAVMEYSVTVLKVKHIIVCGHYGCGGVAAALG----- 230
Query: 184 DSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISR--SILNLLTYPWIEER 241
+ +L ++W+ + + + + D Q R + ++ +++ ++ E
Sbjct: 231 PNLNNLLDHWLRHIRDVIEDNREELDAIE-DPQLRRLKLAELNTRAQAISVTRVGFVREA 289
Query: 242 VRKELLFIHGGYYDLLNCTFEK 263
+ K L +HG YDL N +K
Sbjct: 290 MEKRGLQVHGWIYDLSNGQIKK 311
>sp|A8XKV0|BCA1_CAEBR Beta carbonic anhydrase 1 OS=Caenorhabditis briggsae GN=bca-1 PE=3
SV=2
Length = 270
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 28/136 (20%)
Query: 148 AALEFAVNTLEVQNILVIGHSDCGGIQALMRM------------------QDDVDSRQSL 189
AALE AV ++++++V GHSDC + L ++ ++ +S + L
Sbjct: 86 AALELAVKRGKIRHVVVCGHSDCKAMNTLYQLHQCPTKFDVSSPMDQWLRRNGFESMKKL 145
Query: 190 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKES---------ISRSILNLLTYPWIEE 240
E + K KF ++ + SF+ EK S + + I+N+ T+ ++++
Sbjct: 146 NERLHIGPKTMKFESEVAPSQ-SFEAIIDPMEKWSAEDKLSQINVLQQIMNISTHEFLKD 204
Query: 241 RVRKELLFIHGGYYDL 256
+ L +HG ++++
Sbjct: 205 YLEAGNLHLHGAWFNI 220
>sp|C5BL66|LEUC_TERTT 3-isopropylmalate dehydratase large subunit OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=leuC PE=3 SV=1
Length = 474
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILV 164
+ FK N + + H M I C DS + AL F + T EV+++L
Sbjct: 101 IVEFKINDNRQGIVHVVGPETGGCLPGMTIVCGDSHTSTNGALGALSFGIGTSEVEHVLA 160
Query: 165 IGHSDCGGIQALMRMQDDVDSR--QSLTENWVVNAKVAKFRTKAYTA 209
+ C + + M VD + Q +T VV A +AK T T
Sbjct: 161 ---TQCLVAKKMKNMLIKVDGQLGQGVTAKDVVLAIIAKIGTAGGTG 204
>sp|A8G9Q9|LEUC_SERP5 3-isopropylmalate dehydratase large subunit OS=Serratia
proteamaculans (strain 568) GN=leuC PE=3 SV=1
Length = 466
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILV 164
L + N ++ + H + + M I C DS +L F + T EV+++L
Sbjct: 95 VLLYDLNHPYQGIVHVIGPEQGMTLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLA 154
Query: 165 IGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHL 211
+ G M+++ D+ + +T +V A + K + T H+
Sbjct: 155 T-QTLKQGRAKTMKIEVTGDAAEGITAKDIVLAVIGKTGSAGGTGHV 200
>sp|Q22460|BCA1_CAEEL Beta carbonic anhydrase 1 OS=Caenorhabditis elegans GN=bca-1 PE=3
SV=1
Length = 270
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 34/139 (24%)
Query: 148 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQD-----DVDSRQSLTENWV-------- 194
AALE AV +++I+V GHSDC I L + DV S ++WV
Sbjct: 86 AALELAVKRGGIRHIVVCGHSDCKAINTLYGLHQCPKNFDVTSPM---DHWVRRNGFASV 142
Query: 195 --VNAKV------AKFRTKAYTAHLSFDQQCRHCE---------KESISRSILNLLTYPW 237
+N ++ KF ++ + SFD + + ++ + ++N+ ++ +
Sbjct: 143 KRLNERLHRGPSSMKFESEVAPSQ-SFDAIIDPMDTLAMEDKLSQINVLQQLINICSHEF 201
Query: 238 IEERVRKELLFIHGGYYDL 256
++E + L IHG ++D+
Sbjct: 202 LKEYLESGRLHIHGMWFDI 220
>sp|A4XVW2|LEUC_PSEMY 3-isopropylmalate dehydratase large subunit OS=Pseudomonas
mendocina (strain ymp) GN=leuC PE=3 SV=1
Length = 475
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILV 164
L FK N + + H + + M + C DS AL + T EV+++L
Sbjct: 101 ILEFKMNDVRQGIVHVVGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA 160
Query: 165 IGHSDCGGIQALMRMQDDVDSRQ--SLTENWVVNAKVAKFRTKAYTAH 210
+ C + + MQ V+ + +T +V A + K T H
Sbjct: 161 ---TQCLVAKKMKNMQVRVEGKLPFGVTAKDIVLAVIGKIGTAGGNGH 205
>sp|B0U3M6|LEUC_XYLFM 3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa
(strain M12) GN=leuC PE=3 SV=1
Length = 474
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 63 SKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQN 122
+K E S + A T R + D ++C FE FK N + + H
Sbjct: 69 TKAERQGSLLSIADTVSRLQVQTLD--ENCDDFGIFE--------FKMNDVRQGIVHVIG 118
Query: 123 LAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
+ + M + C DS AL + T EV+++L + C Q + MQ
Sbjct: 119 PEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA---TQCLVTQKMKNMQVR 175
Query: 183 VDSRQSLTENWVVNAK 198
V+ T +W V AK
Sbjct: 176 VEG----TLSWGVTAK 187
>sp|A4VKE7|LEUC_PSEU5 3-isopropylmalate dehydratase large subunit OS=Pseudomonas stutzeri
(strain A1501) GN=leuC PE=3 SV=1
Length = 475
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILV 164
L FK N + + H + + M + C DS AL + T EV+++L
Sbjct: 101 ILEFKMNDVRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA 160
Query: 165 IGHSDCGGIQALMRMQDDVDSRQ--SLTENWVVNAKVAKFRTKAYTAH 210
+ C + + MQ V+ + +T +V A + K T H
Sbjct: 161 ---TQCLVAKKMKNMQVRVEGKLPFGVTAKDIVLAVIGKIGTAGGNGH 205
>sp|Q9PAX0|LEUC_XYLFA 3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa
(strain 9a5c) GN=leuC PE=3 SV=1
Length = 474
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 63 SKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQN 122
+K E S + A T R + D ++C FE FK N + + H
Sbjct: 69 TKAERQGSLLSIADTVSRLQVQTLD--ENCDDFGIFE--------FKMNDVRQGIVHVIG 118
Query: 123 LAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
+ + M + C DS AL + T EV+++L + C Q + MQ
Sbjct: 119 PEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA---TQCLVTQKMKNMQVR 175
Query: 183 VDSRQSLTENWVVNAK 198
V+ T W V AK
Sbjct: 176 VEG----TLPWGVTAK 187
>sp|Q87BP9|LEUC_XYLFT 3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=leuC PE=3 SV=1
Length = 474
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 63 SKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQN 122
+K E S + A T R + D ++C FE FK N + + H
Sbjct: 69 TKAERQGSLLSIADTVSRLQVQTLD--ENCDDFGIFE--------FKMNDVRQGIVHVIG 118
Query: 123 LAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
+ + M + C DS AL + T EV+++L + C Q + MQ
Sbjct: 119 PEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA---TQCLVTQKMKNMQVR 175
Query: 183 VDSRQSLTENWVVNAK 198
V+ T W V AK
Sbjct: 176 VEG----TLPWGVTAK 187
>sp|B2I6I6|LEUC_XYLF2 3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa
(strain M23) GN=leuC PE=3 SV=1
Length = 474
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 63 SKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQN 122
+K E S + A T R + D ++C FE FK N + + H
Sbjct: 69 TKAERQGSLLSIADTVSRLQVQTLD--ENCDDFGIFE--------FKMNDVRQGIVHVIG 118
Query: 123 LAKAQSPKFMVIACADSRNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 182
+ + M + C DS AL + T EV+++L + C Q + MQ
Sbjct: 119 PEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA---TQCLVTQKMKNMQVR 175
Query: 183 VDSRQSLTENWVVNAK 198
V+ T W V AK
Sbjct: 176 VEG----TLPWGVTAK 187
>sp|Q0I534|HSLO_HAES1 33 kDa chaperonin OS=Haemophilus somnus (strain 129Pt) GN=hslO PE=3
SV=1
Length = 286
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 148 AALEFAVN-TLEVQN-----ILVIGHSDCGGIQALMRMQDDVDSRQSLTE---NWVVNAK 198
A L+F N T+++Q +L++ SD I+AL R+QDDV +L+E N ++
Sbjct: 60 ATLKFKGNITIQIQGNGPLKLLLVNGSDSQQIRALARLQDDVYDDMTLSELVGNGILVIT 119
Query: 199 VAKFRTKAYTAHLSFDQ 215
+A + Y ++ D+
Sbjct: 120 IAPTNGERYQGVIALDK 136
>sp|Q5FLW2|MUTS2_LACAC MutS2 protein OS=Lactobacillus acidophilus (strain ATCC 700396 /
NCK56 / N2 / NCFM) GN=mutS2 PE=3 SV=1
Length = 785
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 141 NGPSETNAALEFAVNTLEVQ---NILVIGHSDCGGIQALMRMQDD-VDSRQSLT--ENWV 194
N P TNA++EF + TL I + GHS+ I + M++D V + Q L E+
Sbjct: 457 NRPRTTNASMEFDLKTLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAQELMSDEDSD 516
Query: 195 VNAKVAKF--RTKAYTAHLSFDQQCRHCEKESISRS--ILNLL--TYPWIEERVRKELLF 248
+N +AK +TKA T R+ + S+ RS + L W +RV+K+L F
Sbjct: 517 INKMIAKLNAQTKAATT-------ARNRLETSLDRSQKLEQKLQQALDWYNQRVQKQLDF 569
>sp|Q7MX26|RPOC_PORGI DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=rpoC PE=3 SV=1
Length = 1433
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQGF-TPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|B2RL44|RPOC_PORG3 DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rpoC PE=3
SV=1
Length = 1433
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQGF-TPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|A8YTJ4|MUTS2_LACH4 MutS2 protein OS=Lactobacillus helveticus (strain DPC 4571)
GN=mutS2 PE=3 SV=1
Length = 785
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 141 NGPSETNAALEFAVNTLEVQ---NILVIGHSDCGGIQALMRMQDD-VDSRQSLT--ENWV 194
N P NA++EF + TL I + GHS+ I + M++D V + Q+L E+
Sbjct: 458 NRPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLMADEDSD 517
Query: 195 VNAKVAKF--RTKAYTAHLSFDQQCRHCEKESISRS--ILNLL--TYPWIEERVRKELLF 248
+N +AK +TKA T R+ + S+ RS + L W +RV+K+L F
Sbjct: 518 INKMIAKLNAQTKAATT-------ARNRLETSLDRSQKLEQKLQQALDWYNQRVQKQLDF 570
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 152 FAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHL 211
F +T+ + N L+ ++ CG + MR+ DD+DSR ++ N ++ KAY+ H
Sbjct: 400 FLADTV-LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML---------KAYSLHG 449
Query: 212 SFD 214
D
Sbjct: 450 QVD 452
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,658,526
Number of Sequences: 539616
Number of extensions: 3784073
Number of successful extensions: 10144
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 10079
Number of HSP's gapped (non-prelim): 66
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)