Query 022886
Match_columns 290
No_of_seqs 134 out of 1510
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 12:46:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 3.1E-32 1.1E-36 253.1 21.6 253 2-282 157-427 (433)
2 3isz_A Succinyl-diaminopimelat 100.0 4.9E-31 1.7E-35 240.4 25.4 245 2-282 113-374 (377)
3 1vgy_A Succinyl-diaminopimelat 100.0 2E-31 6.7E-36 244.9 22.7 245 2-282 116-377 (393)
4 2f7v_A Aectylcitrulline deacet 100.0 1.2E-31 4.2E-36 244.3 18.4 232 11-280 121-366 (369)
5 3tx8_A Succinyl-diaminopimelat 100.0 2E-31 6.8E-36 242.8 18.4 242 2-280 116-368 (369)
6 3rza_A Tripeptidase; phosphory 100.0 2.1E-30 7.1E-35 238.3 18.8 237 2-282 142-391 (396)
7 1xmb_A IAA-amino acid hydrolas 100.0 6.5E-30 2.2E-34 236.6 20.8 241 2-283 130-402 (418)
8 3gb0_A Peptidase T; NP_980509. 100.0 2.9E-30 1E-34 235.4 17.9 236 2-281 121-370 (373)
9 3ct9_A Acetylornithine deacety 100.0 4.7E-30 1.6E-34 232.8 17.1 223 2-280 118-352 (356)
10 1cg2_A Carboxypeptidase G2; me 100.0 3E-30 1E-34 237.0 15.6 239 2-282 132-389 (393)
11 1ysj_A Protein YXEP; M20 famil 100.0 1.6E-29 5.6E-34 232.9 17.8 242 2-283 136-400 (404)
12 3io1_A Aminobenzoyl-glutamate 100.0 1.2E-29 3.9E-34 236.7 16.7 240 2-281 163-430 (445)
13 2rb7_A Peptidase, M20/M25/M40 100.0 1.5E-29 5.2E-34 230.1 14.2 227 2-282 113-358 (364)
14 3pfe_A Succinyl-diaminopimelat 100.0 2.3E-28 8E-33 229.5 22.1 256 2-283 143-469 (472)
15 2pok_A Peptidase, M20/M25/M40 100.0 7.6E-29 2.6E-33 233.4 16.8 252 2-280 160-478 (481)
16 3ife_A Peptidase T; metallopep 100.0 2.5E-29 8.7E-34 233.7 13.2 236 2-282 179-430 (434)
17 3dlj_A Beta-Ala-His dipeptidas 100.0 1.8E-27 6.3E-32 224.2 24.3 257 2-284 156-483 (485)
18 3ram_A HMRA protein; two-domai 100.0 4.7E-28 1.6E-32 222.5 16.3 217 2-259 107-329 (394)
19 2zog_A Cytosolic non-specific 100.0 2.7E-27 9.1E-32 222.6 21.8 259 2-283 149-475 (479)
20 1z2l_A Allantoate amidohydrola 99.9 8.8E-27 3E-31 215.8 15.8 244 2-282 107-409 (423)
21 2v8h_A Beta-alanine synthase; 99.9 2.4E-26 8.1E-31 216.0 18.3 243 2-283 137-446 (474)
22 3n5f_A L-carbamoylase, N-carba 99.9 2.9E-26 1E-30 211.4 18.4 240 2-282 103-405 (408)
23 1fno_A Peptidase T; metallo pe 99.9 1.5E-26 5.1E-31 214.0 15.9 236 2-283 153-405 (417)
24 2qyv_A XAA-His dipeptidase; YP 99.9 2.5E-26 8.4E-31 216.6 17.5 246 4-281 128-483 (487)
25 3mru_A Aminoacyl-histidine dip 99.9 6.5E-26 2.2E-30 213.7 17.4 244 9-282 135-486 (490)
26 3khx_A Putative dipeptidase sa 99.9 2.4E-26 8.1E-31 216.9 14.1 245 2-282 151-488 (492)
27 1lfw_A PEPV; hydrolase, dipept 99.9 3.3E-23 1.1E-27 194.3 18.1 240 2-282 132-464 (470)
28 3t68_A Succinyl-diaminopimelat 98.9 7.5E-09 2.6E-13 89.5 10.8 55 2-58 116-170 (268)
29 4h2k_A Succinyl-diaminopimelat 98.7 5.5E-08 1.9E-12 84.1 9.8 55 2-58 116-170 (269)
30 1q7l_B Aminoacylase-1; catalys 98.7 4.5E-08 1.5E-12 69.9 6.8 66 217-284 1-80 (88)
31 1q7l_A Aminoacylase-1; catalys 98.3 7.3E-08 2.5E-12 79.5 -0.8 69 2-72 126-198 (198)
32 2wyr_A Cobalt-activated peptid 97.8 3.4E-05 1.2E-09 68.4 7.8 47 2-58 186-232 (332)
33 2wzn_A TET3, 354AA long hypoth 97.7 1.3E-07 4.4E-12 83.0 -9.7 219 10-282 114-347 (354)
34 2fvg_A Endoglucanase; TM1049, 97.5 1.8E-05 6.2E-10 70.5 0.1 61 10-91 184-244 (340)
35 1y0y_A FRV operon protein FRVX 97.4 0.00022 7.4E-09 63.8 6.5 65 215-281 269-347 (353)
36 1rtq_A Bacterial leucyl aminop 95.2 0.0073 2.5E-07 52.5 2.0 52 2-56 130-181 (299)
37 2gre_A Deblocking aminopeptida 94.8 0.0057 2E-07 54.4 0.3 46 2-57 199-244 (349)
38 1vhe_A Aminopeptidase/glucanas 93.9 0.021 7E-07 51.2 2.1 65 215-281 273-351 (373)
39 1tkj_A Aminopeptidase, SGAP; d 93.9 0.025 8.7E-07 48.6 2.4 52 2-56 110-162 (284)
40 1vhe_A Aminopeptidase/glucanas 93.2 0.083 2.8E-06 47.2 4.8 6 252-257 288-293 (373)
41 1ylo_A Hypothetical protein SF 93.2 0.14 4.6E-06 45.2 6.1 65 215-281 257-335 (348)
42 1vho_A Endoglucanase; structur 91.3 0.16 5.3E-06 44.8 4.1 66 214-281 253-333 (346)
43 3cpx_A Aminopeptidase, M42 fam 91.1 0.082 2.8E-06 46.3 2.0 52 214-267 241-297 (321)
44 3iib_A Peptidase M28; YP_92679 90.1 0.13 4.6E-06 47.1 2.6 36 2-40 282-317 (444)
45 3tc8_A Leucine aminopeptidase; 88.0 0.44 1.5E-05 41.4 4.2 52 2-55 140-201 (309)
46 3gux_A Putative Zn-dependent e 86.9 0.5 1.7E-05 41.2 3.9 53 2-56 142-205 (314)
47 2fvg_A Endoglucanase; TM1049, 86.3 0.51 1.7E-05 41.4 3.7 64 216-281 255-332 (340)
48 1ylo_A Hypothetical protein SF 81.6 0.94 3.2E-05 39.6 3.4 39 11-57 189-227 (348)
49 2afw_A Glutaminyl-peptide cycl 79.3 0.86 2.9E-05 39.8 2.3 29 8-39 154-190 (329)
50 1vho_A Endoglucanase; structur 75.6 1.3 4.3E-05 38.8 2.3 38 11-56 192-229 (346)
51 2ek8_A Aminopeptidase; metallo 74.5 1.5 5E-05 39.7 2.5 50 2-56 253-303 (421)
52 3kl9_A PEPA, glutamyl aminopep 74.2 1.7 5.7E-05 38.5 2.7 38 10-55 201-238 (355)
53 2vpu_A TET3, 354AA long hypoth 74.0 3.9 0.00013 36.1 5.1 65 215-280 267-345 (354)
54 3kas_A Transferrin receptor pr 72.6 1.7 5.9E-05 41.6 2.5 31 7-40 320-350 (640)
55 4fuu_A Leucine aminopeptidase; 71.2 4.7 0.00016 34.7 4.9 52 2-55 140-202 (309)
56 4f9u_A CG32412; alpha/beta hyd 70.5 3.3 0.00011 35.7 3.7 33 8-40 127-164 (312)
57 2vpu_A TET3, 354AA long hypoth 69.4 2.2 7.6E-05 37.7 2.4 44 3-55 196-239 (354)
58 3kl9_A PEPA, glutamyl aminopep 68.5 3.4 0.00012 36.5 3.4 65 215-280 266-342 (355)
59 3fed_A Glutamate carboxypeptid 67.1 2.5 8.7E-05 41.0 2.4 31 7-40 365-395 (707)
60 3isx_A Endoglucanase; TM1050, 66.6 5.5 0.00019 35.0 4.3 47 216-263 266-315 (343)
61 3pb6_X Glutaminyl-peptide cycl 65.9 2.9 9.8E-05 36.6 2.3 29 8-39 158-194 (330)
62 4fai_A CG5976, isoform B; alph 64.2 4.7 0.00016 35.1 3.4 33 7-39 150-187 (330)
63 3cpx_A Aminopeptidase, M42 fam 61.4 3.7 0.00013 35.6 2.2 39 15-57 183-221 (321)
64 3isx_A Endoglucanase; TM1050, 58.1 3.7 0.00013 36.1 1.6 37 12-56 198-234 (343)
65 2gre_A Deblocking aminopeptida 54.1 12 0.0004 32.7 4.2 51 215-267 267-322 (349)
66 2glf_A Probable M18-family ami 51.2 25 0.00086 32.0 6.0 46 215-261 368-419 (450)
67 2jvf_A De novo protein M7; tet 39.7 45 0.0015 21.8 4.1 32 142-173 14-45 (96)
68 4axv_A MPAA; hydrolase; HET: M 35.7 98 0.0033 25.1 6.9 71 203-281 161-235 (243)
69 3vat_A Dnpep, aspartyl aminope 32.7 1.1E+02 0.0038 28.1 7.2 64 216-281 405-485 (496)
70 4h3k_B RNA polymerase II subun 28.4 80 0.0027 25.4 4.7 37 249-285 46-95 (214)
71 3p9y_A CG14216, LD40846P; phos 27.7 85 0.0029 24.9 4.7 38 248-285 29-79 (198)
72 1y7e_A Probable M18-family ami 27.6 37 0.0013 30.9 3.1 51 215-267 377-435 (458)
73 2ijz_A Probable M18-family ami 23.8 27 0.00091 31.6 1.4 52 215-267 343-401 (428)
74 4eme_A M18 aspartyl aminopepti 22.0 2.2E+02 0.0074 26.7 7.1 65 216-281 473-559 (571)
75 2ijz_A Probable M18-family ami 21.2 90 0.0031 28.1 4.3 30 2-36 245-274 (428)
76 3kz5_E Protein SOPB; partition 21.0 68 0.0023 19.5 2.3 29 142-174 20-48 (52)
77 1oey_A P67-PHOX, neutrophil cy 20.2 52 0.0018 22.3 1.9 28 145-172 12-39 (83)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.1e-32 Score=253.11 Aligned_cols=253 Identities=12% Similarity=0.103 Sum_probs=200.7
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~Hs 81 (290)
++|++.+..++++|.|+|+++||.++ .|++.+++.+ +++|++|+.||+...++.+++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRG----YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTT----CCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcC----CCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777789999999999999987 8999998865 3579999999998889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhcCC-----CCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCC
Q 022886 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (290)
Q Consensus 82 ~~p~~g~NAi~~~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~ 156 (290)
+.|+.|.||+..+++++.+|+....+. .++. ...+..+.+++++.|+ +|...|+||++|++.+++|++|+
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPW----FGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTT----TTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCcc----ccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999988753210 0110 0012235688999999 99999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEe-cCCCccccCCCCHHHHHHHHHHHHHhCCC-
Q 022886 157 YNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHV- 234 (290)
Q Consensus 157 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~d~~~~~~l~~a~~~~~g~~- 234 (290)
++.+++.+++++.+++..+....+ .+..+++++. ..+|++.++.|+++++.+.+++++.+|.+
T Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~ 369 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQATDSFL---------------SENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPL 369 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHH---------------HHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCHHHHHHHHHHHHHHHhhhCccc---------------ccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999998865432100 0123455654 45788888889999999999999988864
Q ss_pred CccccccCcchHHHHhh-cCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 235 NPYSITGTLPLIRELQD-EGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 235 ~~~~~~gg~d~~~~~~~-~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
....+.|++| +++|.+ .|+|++.||||.. .|+ +...+++|..++.+.
T Consensus 370 ~~~~~~g~~D-~~~~~~~~giP~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~~ 427 (433)
T 3pfo_A 370 DARLSTAVND-TRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEW 427 (433)
T ss_dssp CEEEESSCCT-HHHHHHTTCCCEEECCCCEECTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeecc-HHHHHhhCCCCEEEECCCCccCCCCCceEEHHHHHHHHHHHHHHHHHH
Confidence 4456778888 555766 6999999999742 333 556677777776654
No 2
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=4.9e-31 Score=240.41 Aligned_cols=245 Identities=17% Similarity=0.153 Sum_probs=185.9
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCCC-----ceeeeceeEEEEEEEEe
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~~~~~v~v~G 76 (290)
+.|++.+..++++|.|+|+++||.++. .|++.+++....++.++|++++.||+... +..+++|..+++++++|
T Consensus 113 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G 190 (377)
T 3isz_A 113 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190 (377)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEEC
T ss_pred HHHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEc
Confidence 345666678899999999999998752 49999987654444567999999987532 56799999999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCC-ccceeCCceEEEEEEEECC
Q 022886 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (290)
Q Consensus 77 ~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~-~~n~vP~~a~~~~~iR~~p 155 (290)
+++|++.|+.|.||+..+++++.+|+....+... .+..+.+++++.|+ +|. +.|+||++|++.+|+|++|
T Consensus 191 ~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~--------~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~ 261 (377)
T 3isz_A 191 IQGHVAYPHLAENPIHKAALFLQELTTYQWDKGN--------EFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCT 261 (377)
T ss_dssp C-------CGGGCHHHHHHHHHHHHHHCCCCCCC--------SSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECT
T ss_pred cccccCCCccCcCHHHHHHHHHHHHHhccccccc--------cccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCC
Confidence 9999999999999999999999999875322111 12245788999999 776 8999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-
Q 022886 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV- 234 (290)
Q Consensus 156 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~- 234 (290)
+++.+++.+.+++.+++. +.++++++....+|+. .+++++++.+++++++.+|.+
T Consensus 262 ~~~~~~i~~~i~~~~~~~-----------------------g~~~~i~~~~~~~p~~-~~~~~l~~~l~~a~~~~~g~~~ 317 (377)
T 3isz_A 262 EVTDEIIKQKVAEMLEKH-----------------------NLKYRIEWNLSGKPFL-TKPGKLLDSITSAIEETIGITP 317 (377)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEECCCCEE-CCTTHHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHHHc-----------------------CCCeEEEEEecCCCCc-CCCCHHHHHHHHHHHHHhCCCC
Confidence 999999988888877642 3456666654555554 367899999999999988864
Q ss_pred CccccccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 235 NPYSITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 235 ~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
....++|++| ++++...|+|++.|||+.. .|+ +...+++|..++.+.
T Consensus 318 ~~~~~~g~tD-a~~~~~~g~~~v~~Gp~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~l 374 (377)
T 3isz_A 318 KAETGGGTSD-GRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNL 374 (377)
T ss_dssp EEEECSSCCS-HHHHHTTTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred eeeccCcccH-HHHHHHcCCCEEEECCCCCcccCCCCcEEHHHHHHHHHHHHHHHHHH
Confidence 3445677888 6667778999999999753 343 567788888877664
No 3
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2e-31 Score=244.87 Aligned_cols=245 Identities=18% Similarity=0.176 Sum_probs=190.8
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCC-----CceeeeceeEEEEEEEEe
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~-----~i~~~~~g~~~~~v~v~G 76 (290)
+.|++.+.+++++|.|+|++|||+++. .|++.+++.....+.++|++++.||+.. .+..+++|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 456666778899999999999998632 6999998765444456789999998743 256789999999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCC-ccceeCCceEEEEEEEECC
Q 022886 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (290)
Q Consensus 77 ~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~-~~n~vP~~a~~~~~iR~~p 155 (290)
+++|++.|+.|.||+..+++++.+|+....+... .+..+.+++++.|+ +|. ..|+||++|++.+++|++|
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~--------~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEGN--------EYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCC--------SSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhcccccccc--------cccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 9999999999999999999999999875321111 11235688999999 776 8999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-
Q 022886 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV- 234 (290)
Q Consensus 156 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~- 234 (290)
.++.+++.+++++.+++. +.++++++...++|+.. +++++++.+++++++.+|.+
T Consensus 265 ~~~~~~i~~~i~~~~~~~-----------------------~~~~~~~~~~~~~p~~~-~~~~l~~~~~~~~~~~~g~~~ 320 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKH-----------------------GVQYDLQWSCSGQPFLT-QAGKLTDVARAAIAETCGIEA 320 (393)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEEEECCEEC-CSSHHHHHHHHHHHHHHSSCC
T ss_pred CCCHHHHHHHHHHHHHHh-----------------------CCCeEEEEecCCCcccC-CCcHHHHHHHHHHHHHcCCCc
Confidence 999999998888877642 23445555444455544 48899999999999988864
Q ss_pred CccccccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 235 NPYSITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 235 ~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
.+..++|++| ++++...|+|++.|||++. .|+ +...+++|..++.+.
T Consensus 321 ~~~~~~g~~D-~~~~~~~~~P~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 377 (393)
T 1vgy_A 321 ELSTTGGTSD-GRFIKAMAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRL 377 (393)
T ss_dssp EEECCSCCCT-HHHHGGGEEEEEECCSBCTTTTSTTCEEETTHHHHHHHHHHHHHHHH
T ss_pred eEecCCccch-HHHHHhCCCCEEEECCCCCCCCCCCCceeHHHHHHHHHHHHHHHHHH
Confidence 3445677888 5557667999999999653 343 567788888887765
No 4
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.98 E-value=1.2e-31 Score=244.32 Aligned_cols=232 Identities=12% Similarity=0.089 Sum_probs=177.5
Q ss_pred CceeEEEEEEecccC-CCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCCCCCCC-CCC
Q 022886 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (290)
Q Consensus 11 ~~~~i~~~~~~dEE~-g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~Hs~~p~-~g~ 88 (290)
++++|.|+|++|||. |+ .|++++++++. ++|+++++||+.+.++.+++|..+++|+++|+++|++.|+ .|.
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999999 76 79999998764 5789999999988888999999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCChHHHHHHHHH
Q 022886 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (290)
Q Consensus 89 NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~ 168 (290)
||+..+++++.+|+....+. .... .. .... .+++++.|+ +|...|+||++|++.+++|++|+++.+++.+.+++
T Consensus 194 nAi~~~~~~i~~l~~~~~~~-~~~~--~~-~~~~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVESL-AHAR--FG-GLTG-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TTCE--ET-TEES-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhhh-cccc--cC-cccC-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 99999999999998753221 1000 00 0011 588999999 99999999999999999999999888888777666
Q ss_pred HHHHHhhcccccccCCCccccccCCCCcceeEEEEEe-cCCCccccCCCCHHHHHHHHHHHHHhCCCCccccccCcchHH
Q 022886 169 YVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIR 247 (290)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~~~~~~gg~d~~~ 247 (290)
.+++. ++++++++. ..+|++.+++ +++++.+++++++.+|.+....+.|++| ++
T Consensus 268 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~a~~~~~g~~~~~~~~g~~D-~~ 322 (369)
T 2f7v_A 268 FADPA-----------------------AAHFEETFRGPSLPSGDIAR-AEERRLAARDVADALDLPIGNAVDFWTE-AS 322 (369)
T ss_dssp TCSSC-----------------------CSEEEEEEEECCBSCSSHHH-HHHHHHHHHHHHHHTTCCBCCCBSSCCT-HH
T ss_pred HHHHh-----------------------cCceEEEeccCCCCccCCCC-CHHHHHHHHHHHHhhCCCCCccccccCc-HH
Confidence 55431 245666655 4688888666 8999999999999888643345778888 45
Q ss_pred HHhhcCCcEEEEcCCCC--ccc---------cchHHHHHHHHHH
Q 022886 248 ELQDEGFDVQTAGYGMP--PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 248 ~~~~~g~~~v~~Gpg~~--~~~---------~~~~~~iy~~~~~ 280 (290)
+|.+.|+|++.||||.. .|+ +...+++|..++.
T Consensus 323 ~~~~~g~p~v~~Gpg~~~~~H~~~E~~~~~~l~~~~~~~~~~~~ 366 (369)
T 2f7v_A 323 LFSAGGYTALVYGPGDIAQAHTADEFVTLAQLQRYVESVNRIIN 366 (369)
T ss_dssp HHHHTTCCEEECCSSCGGGTTCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEECCCCccccCCCCceEEHHHHHHHHHHHHHHHH
Confidence 57777999999999763 343 4566667766654
No 5
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.97 E-value=2e-31 Score=242.76 Aligned_cols=242 Identities=14% Similarity=0.128 Sum_probs=184.1
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~Hs 81 (290)
++|++. ..++++|.|+|+++||.|+.+ .|++.+++.+ .+.+++|+++++||+.+.++.+++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~~-~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADHL-NGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTTS-CHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCccc-ccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 456653 368999999999999998521 4999999876 3456789999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCChHH
Q 022886 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (290)
Q Consensus 82 ~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~~~ 161 (290)
+.|+.|.||+..+++++.+|++...+.... .++..+.+++++.|+ +|.+.|+||++|++.+|+|++|+++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~------~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVNI------DGLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEEE------TTEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhccccccc------CCcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 999999999999999999998753221110 011113678999999 8999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCCCcccccc
Q 022886 162 VMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITG 241 (290)
Q Consensus 162 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~~~~~~g 241 (290)
+.+.+++.+++.+ .+++++++ ....+++..+.++++++.+.+++ |...+..+.|
T Consensus 266 v~~~i~~~~~~~~--------------------~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~g 319 (369)
T 3tx8_A 266 AIEHVVETLELDG--------------------QDGIEWAV--EDGAGGALPGLGQQVTSGLIDAV----GREKIRAKFG 319 (369)
T ss_dssp HHHHHHHHTTTTT--------------------STTEEEEE--EEEECCBCCCTTSHHHHHHHHHH----CGGGEEECCS
T ss_pred HHHHHHHHHHhcc--------------------cCCeEEEE--EecCCCCCCCCCCHHHHHHHHHc----CCCCCccccc
Confidence 8888877776532 01344444 33345555567899988887663 5422345678
Q ss_pred CcchHHHHhhcCCcEEEEcCCCC--ccc---------cchHHHHHHHHHH
Q 022886 242 TLPLIRELQDEGFDVQTAGYGMP--PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 242 g~d~~~~~~~~g~~~v~~Gpg~~--~~~---------~~~~~~iy~~~~~ 280 (290)
++| +++|.+.|+|++.||||.. .|+ +...+++|.+++.
T Consensus 320 gtD-~~~~~~~giP~~~~Gpg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 320 WTD-VSRFSAMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp CCT-HHHHHTTTCCEEEECSSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ccc-hHHHhhCCCCEEEECCCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 888 4557778999999999863 454 4455666666543
No 6
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.97 E-value=2.1e-30 Score=238.32 Aligned_cols=237 Identities=15% Similarity=0.219 Sum_probs=191.0
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC--CCCceeeeceeEEEEEEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA--DKQPCIGTGGMIPWKLHVTGKLF 79 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~--~~~i~~~~~g~~~~~v~v~G~~~ 79 (290)
++|++.+. ++++|.|+|+++||.|+ .|++.+.++ ++++|+++..+++ .+.++++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQI-PHGQIQFVITVGEESGL---IGAKELNSE----LLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHTC-CCCCEEEEEESCGGGTS---HHHHHCCGG----GCCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEccccccc---HhHhhhchh----hcccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 45667664 68999999999999987 899998654 3457889988875 36788999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCCh
Q 022886 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (290)
Q Consensus 80 Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~ 159 (290)
|+|.|+.|+||+..+++++.+|+.. .++ +..+++++.|+ +|.+.|+||++|++.+++|+.|.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVD-----------EITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCC-----------CCceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999988642 111 23678999999 99999999999999999999987777
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-Cccc
Q 022886 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYS 238 (290)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~-~~~~ 238 (290)
+++.+.+++.+++.++. +++++++++...+|++.+++|+++++.+++++++. |.+ ....
T Consensus 279 ~~~~~~i~~~~~~~a~~-------------------~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~-g~~~~~~~ 338 (396)
T 3rza_A 279 KTQVKHMTDVFETTASE-------------------LGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNL-GLSANTII 338 (396)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHT-TCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHh-------------------cCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHc-CCCceecc
Confidence 77777777777665432 25677888878899998888999999999999985 753 4556
Q ss_pred cccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 239 ITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 239 ~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
+.|++|+ ++|.+.|+|++.||||.. .|+ +...+++|..++.+.
T Consensus 339 ~~g~tD~-~~~~~~giP~~~~g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~~l 391 (396)
T 3rza_A 339 SGGGSDG-SIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIV 391 (396)
T ss_dssp CSSCCHH-HHHGGGTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred cceeccH-HHHhhCCCcEEEECCCCCCCCCCcceeEHHHHHHHHHHHHHHHHHH
Confidence 7788885 557777999999999864 333 566788888777654
No 7
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.97 E-value=6.5e-30 Score=236.61 Aligned_cols=241 Identities=16% Similarity=0.244 Sum_probs=169.8
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEec-----CCCC---CceeeeceeEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TADK---QPCIGTGGMIPWKLH 73 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e-----~~~~---~i~~~~~g~~~~~v~ 73 (290)
++|++.+..++++|.|+|+++|| |+ .|++++++++.+++ +|++++.| ++.. .+..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56777777789999999999999 77 79999999875442 57888754 3332 345688999999999
Q ss_pred EEecCCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEE
Q 022886 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (290)
Q Consensus 74 v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~ 153 (290)
++|+++|++.|+.|.||+..+++++.+|+....+..++ ..+.+++++.|+ ||.+.|+||++|++.+++|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 99999999999999999999999999998754332221 124678999999 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecC----CCccccCCCCHHHHHHHHHHHH
Q 022886 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEA----TNGVACNLDSRGFHVLCKATEE 229 (290)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~d~~~~~~l~~a~~~ 229 (290)
+| +.+++.+++++.+++..+. +++++++++... +|++. +|+++++.+++++++
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~~-------------------~g~~~~~~~~~~~~~p~~~~~--~d~~l~~~~~~~~~~ 330 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAAV-------------------HRCNASVNLTPNGREPMPPTV--NNKDLYKQFKKVVRD 330 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHH-------------------TTEEEEEESSGGGCCCBCCEE--ECHHHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEccCCcccCCCcc--CCHHHHHHHHHHHHH
Confidence 98 8888988888888775432 246677776555 66544 789999999999999
Q ss_pred HhCCCC---ccccccCcchHHHHhhcCCcEE--EEcCCC------Cccc---------cchHHHHHHHHHHHHH
Q 022886 230 VVGHVN---PYSITGTLPLIRELQDEGFDVQ--TAGYGM------PPLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 230 ~~g~~~---~~~~~gg~d~~~~~~~~g~~~v--~~Gpg~------~~~~---------~~~~~~iy~~~~~~~~ 283 (290)
++|.++ +..+.|++|++. +.. .+|++ .|||++ ..|+ +...+++|..++.+..
T Consensus 331 ~~g~~~~~~~~~~~g~tD~~~-~~~-~~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 402 (418)
T 1xmb_A 331 LLGQEAFVEAAPVMGSEDFSY-FAE-TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYL 402 (418)
T ss_dssp HHCGGGEEECCCBCCCCTHHH-HHT-TSCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHH
T ss_pred hcCCcceeccCCCCCcchHHH-HHH-HCCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 888642 456788888544 554 48884 478863 2343 5677888888776543
No 8
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.97 E-value=2.9e-30 Score=235.37 Aligned_cols=236 Identities=15% Similarity=0.218 Sum_probs=189.2
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC--CCceeeeceeEEEEEEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~--~~i~~~~~g~~~~~v~v~G~~~ 79 (290)
+.|++.+. ++++|.|+|+++||.|+ .|++.+..+ ++++|+++..|++. +.+.++.+|..+++++++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 56677764 78999999999999987 899998543 35678999988764 5678899999999999999999
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCC
Q 022886 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (290)
Q Consensus 80 Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~ 158 (290)
|++ .|+.|+||+..+++++.+|+.. .++ +..+++++.|+ +|.+.|+||++|++.+++|+.|.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RID-----------SETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCC-----------CccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 7999999999999999877542 111 23678899999 8999999999999999999998777
Q ss_pred hHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-Ccc
Q 022886 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPY 237 (290)
Q Consensus 159 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~-~~~ 237 (290)
.+++.+++++.+++.++. ++.++++++...+|++.+++|+++++.+++++++ .|.+ ...
T Consensus 258 ~~~~~~~i~~~~~~~~~~-------------------~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~~~ 317 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAKE-------------------MGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRTPSLH 317 (373)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHH-TTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHh-------------------cCCeEEEEEecccCCcccCCCCHHHHHHHHHHHH-hCCCceEe
Confidence 777777777777665432 2567788877789999888899999999999998 4754 344
Q ss_pred ccccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHH
Q 022886 238 SITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQK 281 (290)
Q Consensus 238 ~~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~ 281 (290)
.+.|++|+ ++|.+.|+|++.||||.. .|+ +...+++|..++.+
T Consensus 318 ~~~g~~D~-~~~~~~gip~~~~g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 370 (373)
T 3gb0_A 318 QSGGGSDA-NVIAGHGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEE 370 (373)
T ss_dssp ECSSCCHH-HHHHHTTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred cccCcchH-HHHHhCCCCEEEecCCCCcCcCCceEEEHHHHHHHHHHHHHHHHH
Confidence 56788885 557777999999999864 333 55667777777654
No 9
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=4.7e-30 Score=232.81 Aligned_cols=223 Identities=16% Similarity=0.184 Sum_probs=175.9
Q ss_pred hhcccccCCCceeEEEEEEecccC-CCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~-g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~H 80 (290)
+.|++.+ ++++|.|+|+++||. |+ .|++++++++. ++|++++.||+.+.++.+++|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGLP----PVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGSC----CCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhCC----CCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 5667666 789999999999998 77 79999988652 46899999999888889999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCChH
Q 022886 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (290)
Q Consensus 81 s~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~~ 160 (290)
++.| .|.||+..+++++.+|+....+..++ +..+.+++++.|+ +|...|+||++|++.+++|++|.++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~--------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKESP--------LLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT--------TTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhcccccc--------cCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 99999999999999998753322111 1235789999999 999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCCCccccc
Q 022886 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSIT 240 (290)
Q Consensus 161 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~~~~~~ 240 (290)
++.+.+++.++. ++++++ ..+|++.+++|+++++.++++++ .++.+.
T Consensus 259 ~~~~~i~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~ 305 (356)
T 3ct9_A 259 DLFAEIRKHIAC--------------------------DAKARS-FRLNSSRIDEKHPFVQKAVKMGR------IPFGSP 305 (356)
T ss_dssp HHHHHHHHHCCS--------------------------EEEESC-SCSCCEECCTTSHHHHHHHHTTC------CCEEEC
T ss_pred HHHHHHHHHhhC--------------------------eEEEee-ccCCCCCCCCCCHHHHHHHHHhc------CCcccc
Confidence 877666655431 233332 66888888889999998877764 245577
Q ss_pred cCcchHHHHhhcCCcEEEEcCCCC--ccc---------cchHHHHHHHHHH
Q 022886 241 GTLPLIRELQDEGFDVQTAGYGMP--PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 241 gg~d~~~~~~~~g~~~v~~Gpg~~--~~~---------~~~~~~iy~~~~~ 280 (290)
|++|++ ..++|++.||||.. .|+ +...+++|..++.
T Consensus 306 g~tD~~----~~~~p~v~~G~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 352 (356)
T 3ct9_A 306 TLSDQA----LMSFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLLD 352 (356)
T ss_dssp SCCGGG----GCCSCEEECCSSBGGGTTSTTCEEEHHHHHHHHHHHHHHHT
T ss_pred cccchh----hcCCCEEEECCCccccCcCCCcEEEHHHHHHHHHHHHHHHH
Confidence 888854 35899999999853 343 4455666666544
No 10
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=3e-30 Score=237.01 Aligned_cols=239 Identities=18% Similarity=0.158 Sum_probs=186.2
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC---CCCceeeeceeEEEEEEEEecC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA---DKQPCIGTGGMIPWKLHVTGKL 78 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~---~~~i~~~~~g~~~~~v~v~G~~ 78 (290)
++|++.+..++++|.|+|+++||.|+ .|++++++.+.. ++|++|+.||+ .+.++.+++|..+++|+++|++
T Consensus 132 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~~---~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~ 205 (393)
T 1cg2_A 132 KLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEAK---LADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKA 205 (393)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHHH---HCSEEEECCCEETTSCEEESEECEEEEEEEEEECBC
T ss_pred HHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHhh---cCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeee
Confidence 56777887788899999999999987 799999986432 36899999997 3567889999999999999999
Q ss_pred CCCC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCC
Q 022886 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (290)
Q Consensus 79 ~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~ 157 (290)
+|+| .|+.|.||+..+++++.+|+.... . . .+.+++++.|+ +|...|+||++|++.+++|++|.+
T Consensus 206 ~Hag~~p~~g~nAi~~~~~~i~~l~~~~~-~---~---------~~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 271 (393)
T 1cg2_A 206 SHAGAAPELGVNALVEASDLVLRTMNIDD-K---A---------KNLRFNWTIAK-AGNVSNIIPASATLNADVRYARNE 271 (393)
T ss_dssp EETTSCGGGSBCHHHHHHHHHHHHGGGCB-T---T---------TTEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSHH
T ss_pred cccCCCcccCcCHHHHHHHHHHHHHhhhC-c---c---------cCceEEEEEEe-CCCCCCEECcccEEEEEEeeCChh
Confidence 9996 799999999999999999987532 1 1 14678999999 999999999999999999999765
Q ss_pred ChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccC-CCCHHHHHHHHHHHHHhCCC-C
Q 022886 158 NVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACN-LDSRGFHVLCKATEEVVGHV-N 235 (290)
Q Consensus 158 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~d~~~~~~l~~a~~~~~g~~-~ 235 (290)
+.+++.+.+++.+++ . ...++++++++...+|++..+ .++++++.+++++++ +|.+ .
T Consensus 272 ~~~~i~~~i~~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~ 330 (393)
T 1cg2_A 272 DFDAAMKTLEERAQQ----K----------------KLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKE-AGGTLG 330 (393)
T ss_dssp HHHHHHHHHHHHHTS----C----------------SSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHH-TTCCCE
T ss_pred hHHHHHHHHHHHHhc----c----------------cCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHH-hCCCCc
Confidence 555555555555443 1 122567777777788888754 468899999999986 5754 3
Q ss_pred ccc-cccCcchHHHHhhcCCcEE-EEcCCC---Cc-cc-------cchHHHHHHHHHHHH
Q 022886 236 PYS-ITGTLPLIRELQDEGFDVQ-TAGYGM---PP-LQ-------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 236 ~~~-~~gg~d~~~~~~~~g~~~v-~~Gpg~---~~-~~-------~~~~~~iy~~~~~~~ 282 (290)
+.. +.|++|+ +++...|+|++ .|||+. |. ++ +...+++|..++.+.
T Consensus 331 ~~~~~~g~tD~-~~~~~~giP~~~~~G~~~~~~H~~~~E~i~~~~l~~~~~~~~~~~~~l 389 (393)
T 1cg2_A 331 VEERTGGGTDA-AYAALSGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLIMDL 389 (393)
T ss_dssp EESCBSCCCTH-HHHGGGSCCEECCCSCEEECTTSSSCCEEEGGGHHHHHHHHHHHHHHH
T ss_pred cccCCCcccHH-HHHHhCCCCEEEeCCCCCCCccCCCcceEEehhHHHHHHHHHHHHHHH
Confidence 445 6788884 55777899998 588853 34 33 567788888877654
No 11
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=1.6e-29 Score=232.93 Aligned_cols=242 Identities=17% Similarity=0.196 Sum_probs=173.7
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEe--cCCC--CCce--ee--eceeEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI--DTAD--KQPC--IG--TGGMIPWKLH 73 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~--e~~~--~~i~--~~--~~g~~~~~v~ 73 (290)
++|++.+..++++|.|+|++|||+ + .|++++++++.+++ +|+++.. ||+. +.+. .+ .+|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 567777778899999999999999 5 79999999875543 4677766 6642 3332 24 6899999999
Q ss_pred EEecCCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEE
Q 022886 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (290)
Q Consensus 74 v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~ 153 (290)
++|+++|++.|+.|.||+..+++++.+|+....+..++. .+.+++++.|+ ||.+.|+||++|++.+++|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~---------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSL---------QNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCC---------CCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 999999999999999999999999999876533222211 24688999999 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHH-hC
Q 022886 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEV-VG 232 (290)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~-~g 232 (290)
+|+++.+++.+++++.+++.... +++++++++...+|++. .|+++++.+++++++. +|
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~~-------------------~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~g~g 338 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAAG-------------------YGAQAEFKWFPYLPSVQ--NDGTFLNAASEAAARLGYQ 338 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEE--ECGGGHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-------------------hCCEEEEEEecCCCCcc--CCHHHHHHHHHHHHHhcCC
Confidence 99888788888887777764322 24667777667788876 4577999999999998 66
Q ss_pred CC-CccccccCcchHHHHhhcCCcE--EEEcCCCC--ccc---------cchHHHHHHHHHHHHH
Q 022886 233 HV-NPYSITGTLPLIRELQDEGFDV--QTAGYGMP--PLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 233 ~~-~~~~~~gg~d~~~~~~~~g~~~--v~~Gpg~~--~~~---------~~~~~~iy~~~~~~~~ 283 (290)
.+ .. .+.|++|++. |.. .+|+ +.|||++. .|+ +...+++|..++.+..
T Consensus 339 ~~~~~-~~~g~tD~~~-~~~-~~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 400 (404)
T 1ysj_A 339 TVHAE-QSPGGEDFAL-YQE-KIPGFFVWMGTNGTEEWHHPAFTLDEEALTVASQYFAELAVIVL 400 (404)
T ss_dssp EEECC-CBSSCCTHHH-HHT-TSCEEEEEEECCCSSCTTCTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred ccccc-cCCccchHHH-HHH-HCCeEEEEEcCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 43 33 6778888544 554 3785 47899862 444 5677888888776643
No 12
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.96 E-value=1.2e-29 Score=236.73 Aligned_cols=240 Identities=16% Similarity=0.132 Sum_probs=180.8
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC----CCceeeece---eEEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTGG---MIPWKLHV 74 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~----~~i~~~~~g---~~~~~v~v 74 (290)
++|++.+.+++++|.|+|++|||++ .|++.|+++|.+++ +|++|+.|++. +.+.++++| ..+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~----~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGT----RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTT----CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEecccccc----chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 5677777789999999999999954 69999999987664 68999999753 556665554 57999999
Q ss_pred EecCCCC-CCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEE
Q 022886 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (290)
Q Consensus 75 ~G~~~Hs-~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~ 153 (290)
+|+++|+ +.|+.|+||+..+++++++|+.+ .+..+ +..+++++.|+ +|.+.|+||++|++.+++|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l-~~~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAI-PPHSA-----------GASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTC-CCBTT-----------BCEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHH-HhhcC-----------CCeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 69999999999999999999875 22222 24678999999 89999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCC
Q 022886 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (290)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~ 233 (290)
.|.++.+++.+.+++.++++++ .+++++++++...+|++. +|+++++.+++++++.+|.
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~-------------------~~g~~~~i~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~ 362 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAA-------------------MYEARYELRMMGAATASA--PSPAWVDYLREQAARVPGV 362 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH-------------------HTTCEEEEEEEEEECCCC--CCHHHHHHHHHHHHHSTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-------------------HhCCeEEEEEecCCCCcC--CCHHHHHHHHHHHHHhcCC
Confidence 9876666776666666665443 225677887777777754 7889999999999998775
Q ss_pred CC---ccc-cccCcchHHHHhhc---CCc--EEEEcCCCC--ccc---------cchHHHHHHHHHHH
Q 022886 234 VN---PYS-ITGTLPLIRELQDE---GFD--VQTAGYGMP--PLQ---------FTSFHSVYKTLIQK 281 (290)
Q Consensus 234 ~~---~~~-~~gg~d~~~~~~~~---g~~--~v~~Gpg~~--~~~---------~~~~~~iy~~~~~~ 281 (290)
+. ... +.|++|++.+.+.. |.| .+.||||.. .|+ +...+++|..++.+
T Consensus 363 ~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~ 430 (445)
T 3io1_A 363 QQAVDRIAAPAGSEDATLMMARVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVAVETLARVALN 430 (445)
T ss_dssp CBCBSSCCCCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-----------CCCHHHHHHHHHHHHHHT
T ss_pred ccceecCCCCccHHHHHHHHHHhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 32 223 47888865543321 222 367898642 343 55667777776654
No 13
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.96 E-value=1.5e-29 Score=230.08 Aligned_cols=227 Identities=17% Similarity=0.124 Sum_probs=174.8
Q ss_pred hhcccccCCC---cee--EEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEE---ecCCCCCceeeeceeEEEEEE
Q 022886 2 RKLGETKLKL---KST--VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYW---IDTADKQPCIGTGGMIPWKLH 73 (290)
Q Consensus 2 ~~L~~~~~~~---~~~--i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~---~e~~~~~i~~~~~g~~~~~v~ 73 (290)
++|++.+.++ +++ |.|+|+++||.++. .|++++++++ ++|++++ .+|+. ++++++|..+++|+
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~--~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i~ 183 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM--NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKLT 183 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST--TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch--hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEEE
Confidence 4566666555 568 99999999997431 7999998765 3578888 44554 88899999999999
Q ss_pred EEecCCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEE
Q 022886 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (290)
Q Consensus 74 v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~ 153 (290)
++|+++|++.|+.|.||+..+++++.+|+..+. ++.. ..+..+++++.|+ +|...|+||++|++.+++|+
T Consensus 184 v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~ 253 (364)
T 2rb7_A 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENE------DHWHRTVNLGRIR-AGESTNKVPDVAEGWFNIRV 253 (364)
T ss_dssp EECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCT------TCCSCEEEEEEEE-ECSCTTEECSEEEEEEEEEE
T ss_pred EEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhh------cCCCceEEEEEEe-cCCcCcccCcceEEEEEEee
Confidence 999999999999999999999999999987522 1100 0024788999999 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCC
Q 022886 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (290)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~ 233 (290)
+|.++.+++.+.+++.+++ +++ ...+|++.+++|+++++.++++++ .+|.
T Consensus 254 ~~~~~~~~i~~~i~~~~~~----------------------------~v~-~~~~~~~~~~~~~~l~~~~~~~~~-~~g~ 303 (364)
T 2rb7_A 254 TEHDDPGALIDKIRKTVSG----------------------------TVS-IVRTVPVFLAADSPYTERLLALSG-ATAG 303 (364)
T ss_dssp CTTSCHHHHHHHHHHHCSS----------------------------EEE-EEEEECCEECCCCHHHHHHHHHHC-CEEE
T ss_pred CCCCCHHHHHHHHHHHhhh----------------------------hEE-eccCCccccCCCCHHHHHHHHHHH-hcCC
Confidence 9988888887776665431 222 234677777788999999999987 4453
Q ss_pred CCccccccCcchHHHHhhcCCcEEEEcCCCC--ccc---------cchHHHHHHHHHHHH
Q 022886 234 VNPYSITGTLPLIRELQDEGFDVQTAGYGMP--PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 234 ~~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~--~~~---------~~~~~~iy~~~~~~~ 282 (290)
+ +.|++|+ ++|...++|++.||||.. .|+ +...+++|..++.+.
T Consensus 304 ~----~~g~~D~-~~~~~~~~p~v~~Gp~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 358 (364)
T 2rb7_A 304 K----AHGASDA-RYLGENGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREM 358 (364)
T ss_dssp E----ESSCCGG-GGTGGGTCCEEECCCCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHH
T ss_pred C----CCCCchH-HHHHhcCCCEEEECCCCccccCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 2 5677785 446657999999999764 243 567788888877654
No 14
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.96 E-value=2.3e-28 Score=229.53 Aligned_cols=256 Identities=13% Similarity=0.092 Sum_probs=189.7
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccC-CCCcEEEecCCC-----CCceeeeceeEEEEEEE-
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV- 74 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~-~~d~~i~~e~~~-----~~i~~~~~g~~~~~v~v- 74 (290)
++|++.+..++ +|.|+|++|||+|+ .|++.+++++. +.+ ++|++++.|++. ..+.++++|..++++++
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777887777 99999999999998 79999998752 223 478999999753 24668999999988555
Q ss_pred -EecCCCCCCCCCC-CCHHHHHHHHHHHHHhhhc---------CCCCCCCc--------------ccccC-------cCC
Q 022886 75 -TGKLFHSGLPHKA-INPLELAMEALKVIQTRFY---------KDFPPHPK--------------EQVYG-------FET 122 (290)
Q Consensus 75 -~G~~~Hs~~p~~g-~NAi~~~~~~i~~l~~~~~---------~~~~~~~~--------------~~~~~-------~~~ 122 (290)
+|+++|+|.|+.+ .||+..+++++++|++... +.+++... ...++ +..
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 8999999998754 5999999999999987521 11111000 00000 000
Q ss_pred -----------CCceeeeEEecCC----CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCcc
Q 022886 123 -----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (290)
Q Consensus 123 -----------~~~i~~~~i~~gg----~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 187 (290)
.++++++.|+ || ++.|+||++|++++++|+.|+++.+++.+.|++.+++..
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~------------- 363 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP------------- 363 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-------------
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-------------
Confidence 4688999999 65 789999999999999999999999999888888887532
Q ss_pred ccccCCCCcceeEEEEEec-CCCccccCCCCH-HHHHHHHHHHHHhCCCCccccccCcc-hHHHHhh--cCCcEEEEcCC
Q 022886 188 KYVLPDENIRGSLTLTFDE-ATNGVACNLDSR-GFHVLCKATEEVVGHVNPYSITGTLP-LIRELQD--EGFDVQTAGYG 262 (290)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~p~~~~~~d~~-~~~~l~~a~~~~~g~~~~~~~~gg~d-~~~~~~~--~g~~~v~~Gpg 262 (290)
.++++++++... .+|++.++.+++ +++.+++++++.+|.++.....||+| ++.+|.+ .|+|++.+|+|
T Consensus 364 -------~~g~~v~v~~~~~~~pp~~~~~n~~~l~~~~~~a~~~~~G~~~~~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g 436 (472)
T 3pfe_A 364 -------PYNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVL 436 (472)
T ss_dssp -------GGGCEEEEEECSCCBCCEECCCCCHHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHCTTCEEEEECCB
T ss_pred -------CCCeEEEEEecCCCCCcccCCCCChHHHHHHHHHHHHHcCCCceeccCCCchhhHHHHHHHcCCCCEEEecCC
Confidence 125677777776 889998887777 67899999999889754444566767 5666664 49999999975
Q ss_pred C---Cccc---------cchHHHHHHHHHHHHH
Q 022886 263 M---PPLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 263 ~---~~~~---------~~~~~~iy~~~~~~~~ 283 (290)
. ..|+ +...+++|..++.+.+
T Consensus 437 ~~~~~~H~p~E~i~~~~l~~g~~~l~~~l~~la 469 (472)
T 3pfe_A 437 GPHSNAHGPNEFLHLDMVKKLTSCVSYVLYSFS 469 (472)
T ss_dssp CTTCCTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHh
Confidence 4 2444 4566777777766543
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.96 E-value=7.6e-29 Score=233.38 Aligned_cols=252 Identities=14% Similarity=0.196 Sum_probs=186.1
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCC-CCcEEEecCCCC-----CceeeeceeEEEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTADK-----QPCIGTGGMIPWKLHVT 75 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~-~d~~i~~e~~~~-----~i~~~~~g~~~~~v~v~ 75 (290)
++|++.+..++++|.|+|+++||+|+ .|++.+++++. +.++ +|++|+.+++.. .++++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 56676655789999999999999998 79999987642 1234 789999888532 46678999999999999
Q ss_pred ecC--CCCCCCCCCCCHHHHHHHHHHHHHhhhcC--------CCCCCCc---c--ccc----------------------
Q 022886 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYK--------DFPPHPK---E--QVY---------------------- 118 (290)
Q Consensus 76 G~~--~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~--------~~~~~~~---~--~~~---------------------- 118 (290)
|++ +||+.|+.|.||+..+++++.+|+....+ ...+... . ...
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 89999999999999999999988653200 0000000 0 000
Q ss_pred C------cCCCCceeeeEEecCCC----ccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCccc
Q 022886 119 G------FETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSK 188 (290)
Q Consensus 119 ~------~~~~~~i~~~~i~~gg~----~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 188 (290)
+ .....+++++.|+ +|. +.|+||++|++.+++|++|+++.+++.+.+++.+++...
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~------------- 381 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF------------- 381 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-------------
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-------------
Confidence 0 0124688999999 765 789999999999999999999999999999888876421
Q ss_pred cccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCCC-ccccccCc-chHHHHhhcCCcEEEEcCCCC--
Q 022886 189 YVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTL-PLIRELQDEGFDVQTAGYGMP-- 264 (290)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~-~~~~~gg~-d~~~~~~~~g~~~v~~Gpg~~-- 264 (290)
.++ ++++...+|++.++.|+++++.+++++++.+|.++ .....||+ |++.+.+..|+|++.||||..
T Consensus 382 -------~~~--~v~~~~~~p~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~gg~~D~~~~~~~~g~p~v~~G~g~~~~ 452 (481)
T 2pok_A 382 -------DKV--ELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANS 452 (481)
T ss_dssp -------TTE--EEEEEEEECCBCCCSCSHHHHHHHHHHTTTCTTCEEEESCBSSCCTHHHHHHHHCCCEEBCCSBCTTC
T ss_pred -------Cce--EEEEccCCCcccCCCCCHHHHHHHHHHHHHcCCCccccccCCCCCchHHHHHHcCCCEEEecCCCccc
Confidence 133 44555578888888899999999999998878643 33344554 876544457999999999852
Q ss_pred -ccc---------cchHHHHHHHHHH
Q 022886 265 -PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 265 -~~~---------~~~~~~iy~~~~~ 280 (290)
.|+ +...+++|.+++.
T Consensus 453 ~~H~~~E~i~i~~l~~~~~~~~~~l~ 478 (481)
T 2pok_A 453 RDHGGDENVRIADYYTHIELVEELIR 478 (481)
T ss_dssp CTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcEEHHHHHHHHHHHHHHHH
Confidence 344 4555666666554
No 16
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.96 E-value=2.5e-29 Score=233.72 Aligned_cols=236 Identities=14% Similarity=0.046 Sum_probs=180.9
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC-CCceeeeceeEEEEEEEEecCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~~~~~v~v~G~~~H 80 (290)
++|++.+..++++|.|+|++|||+| .|++.+... .+++|++++.|++. +.++++++|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g----~Ga~~~~~~----~~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIG----RGPAHFDVE----AFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGT----CTGGGCCHH----HHCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccC----hHHHHhhhh----hcCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 5678888889999999999999988 488887432 23578999999874 57889999999999999999999
Q ss_pred CC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCCh
Q 022886 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (290)
Q Consensus 81 s~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~ 159 (290)
|+ .|+.|+||+..+++++.+|+... .+. ..+.+++.++ +| ..|+||++|++.+++|++|+++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~~---~~~-----------~~~~~~g~i~-~g-~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVEE---APE-----------YTEGYEGFYH-LL-SLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTC---SGG-----------GCCTTCCEEE-EE-EEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhccccc---CCC-----------cceeeeEEEE-ee-eEeEecCeEEEEEEEecCCHHHH
Confidence 87 79999999999999999886541 111 1223455666 43 48899999999999999987777
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcc-eeEEEEEecCCCcc--ccCCCCHHHHHHHHHHHHHhCCC-C
Q 022886 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIR-GSLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHV-N 235 (290)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~--~~~~d~~~~~~l~~a~~~~~g~~-~ 235 (290)
+++.+.|++.++++++.. + +++++++...+|++ .+++|+++++.+++++++ +|.+ .
T Consensus 315 ~~i~~~i~~~~~~~~~~~-------------------g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~ 374 (434)
T 3ife_A 315 EARKNTIENIVKQMQEKY-------------------GQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEPN 374 (434)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------CGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE
T ss_pred HHHHHHHHHHHHHHHHhc-------------------CCceEEEEEeecccchhccccCCHHHHHHHHHHHHH-hCCCCE
Confidence 777777777776654321 2 34666666556654 466899999999999998 6854 3
Q ss_pred ccccccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 236 PYSITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 236 ~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
...+.||+| +++|.+.|+|++.||||+. .|+ +...+++|..++.+.
T Consensus 375 ~~~~~ggtD-~~~~~~~GiP~~~~g~g~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 430 (434)
T 3ife_A 375 IHPIRGGTD-GSQLSYMGLPTPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEIARRF 430 (434)
T ss_dssp ECCBSSCCH-HHHHHHTTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred EeecccCch-HHHHhhCCCcEEEeCCCCCCCcCCceeecHHHHHHHHHHHHHHHHHH
Confidence 445778888 4557778999999999763 333 556777887776654
No 17
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=224.17 Aligned_cols=257 Identities=15% Similarity=0.168 Sum_probs=189.2
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccC--CCCcEEEecCCC-----CCceeeeceeEEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL--KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV 74 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~--~~d~~i~~e~~~-----~~i~~~~~g~~~~~v~v 74 (290)
++|++.+.+++++|.|+|+++||.|+ .|++.+++++. +++ ++|++++.|+.. ..++++++|..+++|++
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v 231 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEK-DRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEV 231 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHT-TTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhh-hhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEE
Confidence 56788888899999999999999998 79999998763 111 478999999853 34668999999999999
Q ss_pred EecCC--CCCCCCCCCCHHHHHHHHHHHHHhhhcCC-----------CCCCCcc-----cccCcC---------------
Q 022886 75 TGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE--------------- 121 (290)
Q Consensus 75 ~G~~~--Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-----------~~~~~~~-----~~~~~~--------------- 121 (290)
+|+++ |+|. .|.||+..+..+++.|..+..+. +++.... ....|.
T Consensus 232 ~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 309 (485)
T 3dlj_A 232 KCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLF 309 (485)
T ss_dssp ESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSC
T ss_pred EECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccc
Confidence 99999 9997 35555555555555554432211 1111000 000111
Q ss_pred -----------CCCceeeeEEecCC----CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCc
Q 022886 122 -----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPV 186 (290)
Q Consensus 122 -----------~~~~i~~~~i~~gg----~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 186 (290)
...+++++.|+ +| ++.|+||++|++++++|+.+.++.+++.+.|++.++..++.
T Consensus 310 ~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~---------- 378 (485)
T 3dlj_A 310 DTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSK---------- 378 (485)
T ss_dssp SSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT----------
T ss_pred cchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccc----------
Confidence 14678999999 87 89999999999999999999999999999999999886542
Q ss_pred cccccCCCCcc--eeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCCCc-cccccCcchHHHHhh-cCCcEEEEcCC
Q 022886 187 SKYVLPDENIR--GSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQD-EGFDVQTAGYG 262 (290)
Q Consensus 187 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~~-~~~~gg~d~~~~~~~-~g~~~v~~Gpg 262 (290)
++ .++++++...+|++.+++|+++++.+++++++.+|.++. ..++|+.|++.+|.+ .+++++.+|+|
T Consensus 379 ---------~g~~~~~~v~~~~~~pp~~~~~d~~~~~~~~~a~~~~~G~~~~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g 449 (485)
T 3dlj_A 379 ---------RNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLG 449 (485)
T ss_dssp ---------TCCSSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHTC--CEECCCB
T ss_pred ---------cCCCeeEEEEEcCCCCceeCCCCCHHHHHHHHHHHHHhCCCceecCCCCchhHHHHHHHHhCCCEEEecCC
Confidence 13 367777777889998888899999999999998886533 346677787665654 68888878875
Q ss_pred C---Cccc---------cchHHHHHHHHHHHHHh
Q 022886 263 M---PPLQ---------FTSFHSVYKTLIQKTWL 284 (290)
Q Consensus 263 ~---~~~~---------~~~~~~iy~~~~~~~~~ 284 (290)
. ..|+ +...+++|..++.+.+.
T Consensus 450 ~~~~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~ 483 (485)
T 3dlj_A 450 AVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQ 483 (485)
T ss_dssp CTTCCTTSTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 3 2343 55678888887776653
No 18
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.95 E-value=4.7e-28 Score=222.46 Aligned_cols=217 Identities=13% Similarity=0.075 Sum_probs=169.1
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHH-HHHHccccccCCCCcEEEecCCCC-CceeeeceeEEEEEEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLF 79 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~-~l~~~~~~~~~~~d~~i~~e~~~~-~i~~~~~g~~~~~v~v~G~~~ 79 (290)
+.|++.+..++++|.|+|++|||+++. .|++ .|++.|.+++ +|++|+.||+.+ .+..+++|..+++|+++|+++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~--~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~ 182 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN--GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSA 182 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT--CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC--CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEcccc
Confidence 456666667899999999999998721 6999 9999887664 589999999864 567789999999999999999
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCC
Q 022886 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (290)
Q Consensus 80 Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~ 158 (290)
|++ .|+.|+||+..++++++.|+.... .... ..+++++.++ +|.+.|+||++|++.+++|..+.++
T Consensus 183 Ha~~~P~~g~nAi~~a~~~i~~l~~l~~-~~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~~ 249 (394)
T 3ram_A 183 HASENADEALNALDAMISYFNGVAQLRQ-HIKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRKE 249 (394)
T ss_dssp BHHHHGGGCBCHHHHHHHHHHHHHHHGG-GSCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHHH
T ss_pred ccCCCCcCCCCHHHHHHHHHHHHHHHHh-hCCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHHH
Confidence 999 899999999999999999987632 2111 2456777788 9999999999999999999997666
Q ss_pred hHHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEE-ecCCCccccCCCCHHHHHHHHHHHHHhCCCC--
Q 022886 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTF-DEATNGVACNLDSRGFHVLCKATEEVVGHVN-- 235 (290)
Q Consensus 159 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~-- 235 (290)
.+++.+.+++.+++.++ .+++++++++ ...+|++. +|+++++.+++++++ .|.+.
T Consensus 250 ~~~i~~~i~~~~~~~a~-------------------~~g~~~ei~~~~~~~~~~~--~d~~l~~~~~~a~~~-~G~~~~~ 307 (394)
T 3ram_A 250 LDILTEKVNQIARGAAI-------------------QTGCDYEFGPIQNGVNEFI--KTPKLDDLFAKYAEE-VGEAVID 307 (394)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------HHTCEEEEEESSCCBCCCC--CCHHHHHHHHHHHHH-TTCCBCC
T ss_pred HHHHHHHHHHHHHHHHH-------------------HhCCeEEEEEecCCCCCcc--CCHHHHHHHHHHHHH-hCccccc
Confidence 66666666666555432 2367788887 66788765 689999999999988 57432
Q ss_pred ccccccCcchHHHHhhcCCcEEEE
Q 022886 236 PYSITGTLPLIRELQDEGFDVQTA 259 (290)
Q Consensus 236 ~~~~~gg~d~~~~~~~~g~~~v~~ 259 (290)
...+.||+|++. +. .++|++.+
T Consensus 308 ~~~~~g~~D~~~-~~-~~~P~~~~ 329 (394)
T 3ram_A 308 DDFGYGSTDTGN-VS-HVVPTIHP 329 (394)
T ss_dssp SCCCCBCCTHHH-HT-TTSCBCCC
T ss_pred CCCCcccccHHH-HH-HHhchheE
Confidence 345778889655 54 35776543
No 19
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.95 E-value=2.7e-27 Score=222.65 Aligned_cols=259 Identities=14% Similarity=0.147 Sum_probs=192.4
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccC-CCCcEEEecCC-----CCCceeeeceeEEEEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~-~~d~~i~~e~~-----~~~i~~~~~g~~~~~v~v~ 75 (290)
+.|++.+.+++++|.|+|+++||.|+ .|++.+++++...-+ ++|++++.|+. .+.++++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56777888899999999999999987 799999987521111 46899999973 3457789999999999999
Q ss_pred ecC--CCCCCCCCCCCHHHHHHHHHHHHHhhhcCC-----------CCCCCcc-----cccCcC----------------
Q 022886 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE---------------- 121 (290)
Q Consensus 76 G~~--~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-----------~~~~~~~-----~~~~~~---------------- 121 (290)
|++ +|||.+ |.||+..+++++..|+.+..+. +.+.... ....+.
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 7899999999998887643221 0000000 000000
Q ss_pred ----------CCCceeeeEEecCC----CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCcc
Q 022886 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (290)
Q Consensus 122 ----------~~~~i~~~~i~~gg----~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 187 (290)
...+++++.|+ +| ...|+||++|++.+++|+.|+++.+++.+++++++++.++...
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~--------- 373 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQ--------- 373 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTC---------
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccC---------
Confidence 13678899999 76 7899999999999999999999999999999999987654210
Q ss_pred ccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCCCcc-ccccCcchHHHHhh-cCCcEEEE--cCCC
Q 022886 188 KYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQD-EGFDVQTA--GYGM 263 (290)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~~~~-~~~gg~d~~~~~~~-~g~~~v~~--Gpg~ 263 (290)
.+..+++++...+|++.++.|+++++.+++++++.+|.++.+ .+.|++|++.+|.+ .|+|++.+ ||+.
T Consensus 374 --------~~~~~~~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~g~~~~~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~ 445 (479)
T 2zog_A 374 --------SPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSAD 445 (479)
T ss_dssp --------CCSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCTHHHHHHHHHCSEEEECCCBCTT
T ss_pred --------CCceEEEEecCCCCceecCCCCHHHHHHHHHHHHHhCCCceecCCCCccchHHHHHHHhCCCEEEecCCCCc
Confidence 124567776667899988889999999999999988865433 45667786545654 59999986 5543
Q ss_pred -Cccc---------cchHHHHHHHHHHHHH
Q 022886 264 -PPLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 264 -~~~~---------~~~~~~iy~~~~~~~~ 283 (290)
..|+ +...+++|..++.+..
T Consensus 446 ~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 475 (479)
T 2zog_A 446 DGAHSQNEKLNRLNYIEGTKMLAAYLYEVS 475 (479)
T ss_dssp CCTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcEeHHHHHHHHHHHHHHHHHHH
Confidence 2343 5667777777766543
No 20
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.94 E-value=8.8e-27 Score=215.82 Aligned_cols=244 Identities=13% Similarity=0.071 Sum_probs=178.9
Q ss_pred hhcccccCCCceeEEEEEEecccCCCC--CcccHHHHHH----ccccc----------------cC-----------CCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK----DGLLN----------------KL-----------KGG 48 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~--~~~G~~~l~~----~~~~~----------------~~-----------~~d 48 (290)
++|++.+.+++++|.|+|+++||++.. ...|++.+.. ++.++ ++ +.|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567888888999999999999998420 0058999876 22111 01 123
Q ss_pred cEEEecCC----------CCCceeeeceeEEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHhhhcCCCCCCCccc
Q 022886 49 PLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (290)
Q Consensus 49 ~~i~~e~~----------~~~i~~~~~g~~~~~v~v~G~~~Hs~-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~ 116 (290)
+++..|.. ...++.+++|..+++|+++|+++|++ .|+ .|.||+..+++++..|++...+ .++
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 44443322 12355689999999999999999999 795 8999999999999999875432 121
Q ss_pred ccCcCCCCceeeeEEecCC-CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCccccccCCCC
Q 022886 117 VYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDEN 195 (290)
Q Consensus 117 ~~~~~~~~~i~~~~i~~gg-~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (290)
..+++++.|+ +| .+.|+||++|++.+|+|++|.++.+++.+.+++.+++.++.
T Consensus 261 ------~~~~~vg~i~-gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~------------------- 314 (423)
T 1z2l_A 261 ------PLVLTFGKVE-PRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDE------------------- 314 (423)
T ss_dssp ------TCEEECCCEE-EESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH-------------------
T ss_pred ------CceEEEEEEe-ecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3678899999 65 89999999999999999998877777777777777664332
Q ss_pred cceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-CccccccCcchHHHHhhcCCcE-EEEcCCCC--ccc----
Q 022886 196 IRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYSITGTLPLIRELQDEGFDV-QTAGYGMP--PLQ---- 267 (290)
Q Consensus 196 ~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~-~~~~~~gg~d~~~~~~~~g~~~-v~~Gpg~~--~~~---- 267 (290)
+++++++++...+|++. .|+++++.+++++++. |.+ .+..+.|++|+ ++|... +|+ +.|||+.. .|+
T Consensus 315 ~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~-g~~~~~~~~~ggtD~-~~~~~~-~p~~~~~~p~~~~~~H~~~E~ 389 (423)
T 1z2l_A 315 MDIGIDIDLWMDEEPVP--MNKELVATLTELCERE-KLNYRVMHSGAGHDA-QIFAPR-VPTCMIFIPSINGISHNPAER 389 (423)
T ss_dssp HTCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHT-TCCEEEEEESSCCTH-HHHTTT-SCEEEEEECCGGGCCSSTTCC
T ss_pred hCCeEEEEEecCCCCcc--CCHHHHHHHHHHHHHc-CCCeEEecCCCcccH-HHHHhh-CCEEEEEeCCCCCCCCCcccc
Confidence 24566777666788876 4689999999999997 754 34567888885 446554 787 57888753 343
Q ss_pred -----cchHHHHHHHHHHHH
Q 022886 268 -----FTSFHSVYKTLIQKT 282 (290)
Q Consensus 268 -----~~~~~~iy~~~~~~~ 282 (290)
+...+++|..++.+.
T Consensus 390 i~~~~l~~~~~~~~~~~~~l 409 (423)
T 1z2l_A 390 TNITDLAEGVKTLALMLYQL 409 (423)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 556777777776654
No 21
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.94 E-value=2.4e-26 Score=215.97 Aligned_cols=243 Identities=12% Similarity=0.007 Sum_probs=179.9
Q ss_pred hhcccccCCCceeEEEEEEecccC-----CCCCcccHHHHHHccc-------cc----------------cC--------
Q 022886 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGL-------LN----------------KL-------- 45 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~-----g~~~~~G~~~l~~~~~-------~~----------------~~-------- 45 (290)
++|++.+.+++++|.|+|++|||+ |+ .|++.+++... .+ ++
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567888888999999999999998 44 69999864110 00 01
Q ss_pred ---CCCcEEEecCC----------CCCceeeeceeEEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHhhhcCCCC
Q 022886 46 ---KGGPLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (290)
Q Consensus 46 ---~~d~~i~~e~~----------~~~i~~~~~g~~~~~v~v~G~~~Hs~-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~ 110 (290)
+.|+.+..|.. ...++.+++|..+++|+++|+++|++ .|+ .|.||+..+++++.+|+....+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 23444444322 12355688999999999999999999 597 89999999999999998753321
Q ss_pred CCCcccccCcCCCCceeeeEEecCC-CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCcccc
Q 022886 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKY 189 (290)
Q Consensus 111 ~~~~~~~~~~~~~~~i~~~~i~~gg-~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 189 (290)
..+++++.|+ +| ...|+||++|++.+++|++|.++.+++.+++++.+++.....
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~------------ 346 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKIN------------ 346 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCC------------
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhc------------
Confidence 2578999999 76 899999999999999999987777777777777776643210
Q ss_pred ccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhC-C-C-CccccccCcchHHHHhhcCCcE-EEEcCCCC-
Q 022886 190 VLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVG-H-V-NPYSITGTLPLIRELQDEGFDV-QTAGYGMP- 264 (290)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g-~-~-~~~~~~gg~d~~~~~~~~g~~~-v~~Gpg~~- 264 (290)
+.++++++++....+|++. .|+++++.+++++++. | . + .+..+.||+|++ +|... +|+ +.|||+..
T Consensus 347 ----~~~g~~~~~~~~~~~~~~~--~d~~l~~~~~~a~~~~-G~~~~~~~~~~~ggtD~~-~~~~~-~P~~~~fgp~~~~ 417 (474)
T 2v8h_A 347 ----DGGALSYESETLQVSPAVN--FHEVCIECVSRSAFAQ-FKKDQVRQIWSGAGHDSC-QTAPH-VPTSMIFIPSKDG 417 (474)
T ss_dssp ----TTCCCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHH-SCGGGEEEEEESSCCTHH-HHTTT-SCEEEEEECCGGG
T ss_pred ----ccCCcEEEEEEecCCCCcc--CCHHHHHHHHHHHHHc-CCCCcceecCCcCCccHH-HHHhh-CCEEEEEeCCCCC
Confidence 0025667777767788876 5799999999999998 7 4 3 455678899954 46555 888 78899743
Q ss_pred -ccc---------cchHHHHHHHHHHHHH
Q 022886 265 -PLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 265 -~~~---------~~~~~~iy~~~~~~~~ 283 (290)
.|+ +...+++|..++.+..
T Consensus 418 ~~H~p~E~i~~~~l~~~~~~~~~~l~~l~ 446 (474)
T 2v8h_A 418 LSHNYYEYSSPEEIENGFKVLLQAIINYD 446 (474)
T ss_dssp CCSSTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 343 5567777877766543
No 22
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.94 E-value=2.9e-26 Score=211.44 Aligned_cols=240 Identities=16% Similarity=0.106 Sum_probs=177.1
Q ss_pred hhcccccCCCceeEEEEEEecccC-----CCCCcccHHHHHH------------ccc---------------c-----cc
Q 022886 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVK------------DGL---------------L-----NK 44 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~-----g~~~~~G~~~l~~------------~~~---------------~-----~~ 44 (290)
+.|++.+.+++++|.|+|+++||. |+ .|++.++. +|. + +.
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~---~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~ 179 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGM---IGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKP 179 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCC---HHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCT
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCC---cCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCc
Confidence 567788888999999999999996 34 69999982 221 1 10
Q ss_pred CCCCcEEEecCCC----------CCceeeeceeEEEEEEEEecCCCC-CCC-CCCCCHHHHHHHHHHHHHhhhcCCCCCC
Q 022886 45 LKGGPLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (290)
Q Consensus 45 ~~~d~~i~~e~~~----------~~i~~~~~g~~~~~v~v~G~~~Hs-~~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~ 112 (290)
.+.|+++..|... ..++.+++|..+++|+++|+++|+ +.| +.|.||+..+++++.+|+... +.++
T Consensus 180 ~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~-- 256 (408)
T 3n5f_A 180 GTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG-- 256 (408)
T ss_dssp TTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS--
T ss_pred cCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC--
Confidence 1345566555432 224568999999999999999999 589 589999999999999998764 2111
Q ss_pred CcccccCcCCCCceeeeEEecCC-CccceeCCceEEEEEEEECCCCChHHHHHHHHHHHHHHhhcccccccCCCcccccc
Q 022886 113 PKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (290)
Q Consensus 113 ~~~~~~~~~~~~~i~~~~i~~gg-~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 191 (290)
+.+++++.|+ +| .+.|+||++|++.+++|+.|.++.+++.+.+++.+++.++.
T Consensus 257 ----------~~~~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~--------------- 310 (408)
T 3n5f_A 257 ----------TTVGTVGQLH-VYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKE--------------- 310 (408)
T ss_dssp ----------SCEEEEEEEE-EESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred ----------CcEEEEEEEE-ecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 3678999999 65 89999999999999999998777777777777666654332
Q ss_pred CCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-CccccccCcchHHHHhhcCCcE-EEEcCCC--Cccc
Q 022886 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYSITGTLPLIRELQDEGFDV-QTAGYGM--PPLQ 267 (290)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~-~~~~~~gg~d~~~~~~~~g~~~-v~~Gpg~--~~~~ 267 (290)
+++++++++...+|++. +|+++++.+++++++. |.+ ....+.|++|++. |.+. +|+ +.|+|+. ..|+
T Consensus 311 ----~g~~~~i~~~~~~p~~~--~d~~l~~~~~~a~~~~-g~~~~~~~~~ggtD~~~-~~~~-iP~~~~~~~~~~~~~H~ 381 (408)
T 3n5f_A 311 ----RNVRVTTERLQEMPPVL--CSDEVKRAAEAACQKL-GYPSFWLPSGAAHDSVQ-LAPI-CPIGMIFVRSQDGVSHS 381 (408)
T ss_dssp ----HTCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHH-TCCCCEEEESSCCTTTT-TTTT-SCEEEEEECCGGGCCSS
T ss_pred ----hCCeEEEEEecCCCCcC--CCHHHHHHHHHHHHHc-CCCcccCCCcCchHHHH-HHHH-CCEEEEEeCCCCCCCCC
Confidence 25677887777788865 6789999999999997 753 4455678888544 5544 898 5677754 2343
Q ss_pred ---------cchHHHHHHHHHHHH
Q 022886 268 ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 268 ---------~~~~~~iy~~~~~~~ 282 (290)
+...+++|..++.+.
T Consensus 382 ~~E~i~~~~l~~~~~~~~~~~~~l 405 (408)
T 3n5f_A 382 PAEWSTKEDCAAGAEVLYHTVWQL 405 (408)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHH
Confidence 445677777666543
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.94 E-value=1.5e-26 Score=213.95 Aligned_cols=236 Identities=11% Similarity=0.034 Sum_probs=177.4
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC-CCCceeeeceeEEEEEEEEecCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~-~~~i~~~~~g~~~~~v~v~G~~~H 80 (290)
+.|++.+ .++++|.|+|+++||.| .|++.+++++ +++|++++.++. .+.++++++|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g----~Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVG----KGAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGT----CTTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccC----CChhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5677777 78899999999999987 4888776443 357889988765 456788999999999999999999
Q ss_pred CC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCCh
Q 022886 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (290)
Q Consensus 81 s~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~ 159 (290)
++ .|+.|.||+..+++++.+|+....+... .....+++++.|+ +| |++|++.+++|+.|.++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 6999999999999999988764211101 0123568888898 65 999999999999987777
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCCccccccCCCCcce--eEEEEEecCCCcc--ccCCCCHHHHHHHHHHHHHhCCC-
Q 022886 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRG--SLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHV- 234 (290)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~--~~~~d~~~~~~l~~a~~~~~g~~- 234 (290)
+++.+.+++.+++..+. ++. ++++++...++++ .+++|+++++.+++++++ .|.+
T Consensus 288 ~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~ 347 (417)
T 1fno_A 288 EARKRKMMEIAKKVGKG-------------------LHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHITP 347 (417)
T ss_dssp HHHHHHHHHHHHHHTTT-------------------CCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHHHHHHHHHHH-------------------cCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHH-cCCCc
Confidence 77777777777665432 122 2555555545543 456899999999999999 5754
Q ss_pred CccccccCcchHHHHhhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHHH
Q 022886 235 NPYSITGTLPLIRELQDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKTW 283 (290)
Q Consensus 235 ~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~~ 283 (290)
....+.|++| +++|...|+|++.|||+.. .|+ +...+++|..++....
T Consensus 348 ~~~~~~ggtD-~~~~~~~gip~v~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 405 (417)
T 1fno_A 348 EMKPIRGGTD-GAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTA 405 (417)
T ss_dssp BCCCBSSCCH-HHHHTTTTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred eeccceeccc-hHhHHhcCCCEEEEcCCCCCCCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3456778888 4557667999999999753 333 5677888888776653
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.94 E-value=2.5e-26 Score=216.58 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=172.1
Q ss_pred cccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC-CCceeeecee---------------
Q 022886 4 LGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM--------------- 67 (290)
Q Consensus 4 L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~--------------- 67 (290)
+++.+ .++++|.|+|+++||.|+ .|++.+++++ +++|++++.|+.. +.++++++|.
T Consensus 128 ~~~~~-~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~ 199 (487)
T 2qyv_A 128 LESND-IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNN 199 (487)
T ss_dssp HHCSS-SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECC
T ss_pred HHhCC-CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccC
Confidence 33334 477999999999999987 8999987654 3478999998875 4566666555
Q ss_pred --EEEEEEEEe-cCCCCCCC-CCC-CCHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeC
Q 022886 68 --IPWKLHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIP 142 (290)
Q Consensus 68 --~~~~v~v~G-~~~Hs~~p-~~g-~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP 142 (290)
.+++|+++| +++||+.| +.| .||+..+++++.+|+.. . + ..+++++.|+ ||...|+||
T Consensus 200 ~g~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~-~----~-----------~~~~~v~~i~-gG~~~NvIP 262 (487)
T 2qyv_A 200 FEHCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQN-Q----P-----------HFDFTLANIR-GGSIRNAIP 262 (487)
T ss_dssp CSEEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHH-C----T-----------TCCEEEEEEE-EESCTTBCC
T ss_pred CCeEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhc-c----C-----------CCcEEEEEEe-CCCcCcccC
Confidence 679999999 89999986 777 69999999999999875 1 1 2467899999 999999999
Q ss_pred CceEEEEEE----------------------------------------EECCCCChHHHHHHHHHHHHHHhhccccccc
Q 022886 143 GECTVSGDV----------------------------------------RLTPFYNVTDVMKRLQEYVDDINENIEKLDT 182 (290)
Q Consensus 143 ~~a~~~~~i----------------------------------------R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~ 182 (290)
++|++.+++ |+.|.++.+++.+.+++. .+++..+..
T Consensus 263 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~----~~gv~~~~~ 338 (487)
T 2qyv_A 263 RESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVL----PNGVVRNSD 338 (487)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHS----CCEEEEECS
T ss_pred CceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhC----CCcceeecc
Confidence 999999999 777644444444443332 211100000
Q ss_pred CCCcc-----------------------cccc-------------CCCCcceeEEEEEecCCCccccCCCCHHHHHHHHH
Q 022886 183 RGPVS-----------------------KYVL-------------PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKA 226 (290)
Q Consensus 183 ~~~~~-----------------------~~~~-------------~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a 226 (290)
..++. |+.+ -+..+++ ++++...+|+|.+++|+++++.++++
T Consensus 339 ~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~p~~~~~~d~~l~~~~~~~ 416 (487)
T 2qyv_A 339 VIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQG--NINLSGDYPGWEPQSHSDILDLTKTI 416 (487)
T ss_dssp SSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTC--EEEEEEEECCBCCCSCCHHHHHHHHH
T ss_pred ccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCc--eEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 00000 0000 0011234 44555678999988999999999999
Q ss_pred HHHHhCCC-CccccccCcchHHHHhh--cCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHH
Q 022886 227 TEEVVGHV-NPYSITGTLPLIRELQD--EGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQK 281 (290)
Q Consensus 227 ~~~~~g~~-~~~~~~gg~d~~~~~~~--~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~ 281 (290)
+++.+|.+ .+..+.||+|++ +|.+ .|+|++.|||+.. .|+ +...+++|..++.+
T Consensus 417 ~~~~~G~~~~~~~~~gg~D~~-~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 483 (487)
T 2qyv_A 417 YAQVLGTDPEIKVIHAGLECG-LLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGILAH 483 (487)
T ss_dssp HHHHHSSCCEEEEESSCCTHH-HHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEeccccHH-HHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHHHHH
Confidence 99988864 456678999854 4654 5899999999642 233 55667777776654
No 25
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.94 E-value=6.5e-26 Score=213.73 Aligned_cols=244 Identities=19% Similarity=0.192 Sum_probs=169.1
Q ss_pred CCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC-CCce------------------eeeceeEE
Q 022886 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPC------------------IGTGGMIP 69 (290)
Q Consensus 9 ~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~-~~i~------------------~~~~g~~~ 69 (290)
..++++|.|+|++|||.|+ .|++.+++. .+++|++++.|+.. +.++ .+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAG----WLKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSS----SCCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhc----ccCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 3568999999999999998 899998764 24568888888642 2221 24579999
Q ss_pred EEEEEEe-cCCCCCC-CCCCC-CHHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceE
Q 022886 70 WKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (290)
Q Consensus 70 ~~v~v~G-~~~Hs~~-p~~g~-NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~ 146 (290)
++|+++| +++||+. |+.|+ ||+..+++++..|++. .+++++.|+ ||.+.|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 8999995 99999 9999999999988651 236889999 9999999999999
Q ss_pred EEEEEEECCCCChHHHHHHHHHHHHHHhhcc-cc------------------------------------cccCCCc---
Q 022886 147 VSGDVRLTPFYNVTDVMKRLQEYVDDINENI-EK------------------------------------LDTRGPV--- 186 (290)
Q Consensus 147 ~~~~iR~~p~~~~~~~~~~i~~~l~~~~~~~-~~------------------------------------~~~~~~~--- 186 (290)
+.+++|........+..+.+.+.++...... +. ++...++
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~ 347 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVE 347 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEE
T ss_pred EEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCee
Confidence 9999997642222223333333332211100 00 0000000
Q ss_pred --------------------cccccCC-------------CCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCC
Q 022886 187 --------------------SKYVLPD-------------ENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (290)
Q Consensus 187 --------------------~~~~~~~-------------~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~ 233 (290)
.|+.... ..++. ++++...+|+|..++|+++++.+++++++.+|.
T Consensus 348 ~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~--~~~~~~~~p~~~~~~d~~lv~~l~~a~~~~~G~ 425 (490)
T 3mru_A 348 TSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGA--QIEFSGAYPGWKPDADSEIMAIFRDMYEGIYGH 425 (490)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTC--EEEEEEEECCBCCCTTCHHHHHHHHHHHTTSSS
T ss_pred EEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCC--eEEecCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Confidence 0000000 11233 455556899999999999999999999999886
Q ss_pred -CCccccccCcchHHHHhhc--CCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 234 -VNPYSITGTLPLIRELQDE--GFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 234 -~~~~~~~gg~d~~~~~~~~--g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
+.++.++||+| +++|... ++|++.|||+.. .|+ +....++|.+++++.
T Consensus 426 ~~~~~~~ggg~d-~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~~~~~~l~~~l~~l 486 (490)
T 3mru_A 426 KPNIMVIHAGLE-CGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAI 486 (490)
T ss_dssp CCCCEEESSCCH-HHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEecHH-HHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHHHHHHHHHHHHHHh
Confidence 56778899999 5656653 889999999543 333 455666666666543
No 26
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.94 E-value=2.4e-26 Score=216.85 Aligned_cols=245 Identities=13% Similarity=0.073 Sum_probs=148.5
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHcccc---------------------------------------
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL--------------------------------------- 42 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~--------------------------------------- 42 (290)
++|++.+..++++|.|+|++|||+|+ .|+++++++...
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~ 227 (492)
T 3khx_A 151 KILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDY 227 (492)
T ss_dssp HHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSE
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccc
Confidence 56788888899999999999999998 899999985321
Q ss_pred ----------ccCCCCcE--EEecCCCC-Cc---------eeeeceeE-----EEEEEEEecCCCCCCCCCCCCHHHHHH
Q 022886 43 ----------NKLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAM 95 (290)
Q Consensus 43 ----------~~~~~d~~--i~~e~~~~-~i---------~~~~~g~~-----~~~v~v~G~~~Hs~~p~~g~NAi~~~~ 95 (290)
.+..||.+ ++.+|+.. .+ ..+++|.. +++|+++|+++|++.|+.|.||+..++
T Consensus 228 ~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a 307 (492)
T 3khx_A 228 ELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLL 307 (492)
T ss_dssp EEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHH
T ss_pred eeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHH
Confidence 01124554 66666542 11 23568888 999999999999999999999999999
Q ss_pred HHHHHHH------hhh---cCCCCCCCcccc------cCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCChH
Q 022886 96 EALKVIQ------TRF---YKDFPPHPKEQV------YGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (290)
Q Consensus 96 ~~i~~l~------~~~---~~~~~~~~~~~~------~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~~ 160 (290)
++|.+|. .++ .+.+........ ....+..++|++.|+ +|. |++|++.+|+|++|..+.+
T Consensus 308 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~~ 381 (492)
T 3khx_A 308 KFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEFE 381 (492)
T ss_dssp HHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCHH
T ss_pred HHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCHH
Confidence 9998875 110 000100000000 012345788888888 554 9999999999999999988
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCC-CCcccc
Q 022886 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH-VNPYSI 239 (290)
Q Consensus 161 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~-~~~~~~ 239 (290)
++.+.+++.+++. ++++++ ...+||+.+++|+++++.+++++++.+|. +.+..+
T Consensus 382 ~v~~~i~~~~~~~-----------------------g~~~~i--~~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ 436 (492)
T 3khx_A 382 KAMDRFANEIQQY-----------------------GFEVKL--GKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTI 436 (492)
T ss_dssp HHHHHHHHHHGGG-----------------------TEEEEE--EEEECCBCCGGGCHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHHc-----------------------CCEEEE--eccCCceecCCCcHHHHHHHHHHHHHhCCCCeEEee
Confidence 8888877776421 344444 34677777778999999999999998785 456678
Q ss_pred ccCcchHHHHhhcCCcEEEEcCCCC--ccc---------cchHHHHHHHHHHHH
Q 022886 240 TGTLPLIRELQDEGFDVQTAGYGMP--PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 240 ~gg~d~~~~~~~~g~~~v~~Gpg~~--~~~---------~~~~~~iy~~~~~~~ 282 (290)
+||+| +++|.. ++++-.++||.. .|+ +...+++|..++.+.
T Consensus 437 gggtD-a~~~~~-~v~~G~~fPg~~~~~H~~dE~v~i~~l~~~~~i~~~~l~~l 488 (492)
T 3khx_A 437 GGGTY-ARNLDK-GVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSL 488 (492)
T ss_dssp -----------------------------CCSCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ehhHH-HHHhhC-ceEECCcCCCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHH
Confidence 88988 565653 443322226542 444 567788888887765
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.90 E-value=3.3e-23 Score=194.26 Aligned_cols=240 Identities=14% Similarity=0.060 Sum_probs=165.5
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccc--cCCCCc---EEEecCCC-------------C-----
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGGP---LYWIDTAD-------------K----- 58 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~--~~~~d~---~i~~e~~~-------------~----- 58 (290)
++|++.+.+++++|.|+|++|||+|+ .|++.+++++... .+.+|. ++++++.. +
T Consensus 132 ~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~ 208 (470)
T 1lfw_A 132 LLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLD 208 (470)
T ss_dssp HHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEE
T ss_pred HHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCccee
Confidence 56778888899999999999999988 8999999865321 122333 33333210 1
Q ss_pred --------Ccee--------------------------eeceeE-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 022886 59 --------QPCI--------------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALK 99 (290)
Q Consensus 59 --------~i~~--------------------------~~~g~~-----~~~v~v~G~~~Hs~~p~~g~NAi~~~~~~i~ 99 (290)
++.. +++|.. +++|+++|+++|++.|+.|.||+..+++++.
T Consensus 209 ~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~ 288 (470)
T 1lfw_A 209 KFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLD 288 (470)
T ss_dssp EEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHT
T ss_pred eeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHH
Confidence 1110 235665 8999999999999999999999999999998
Q ss_pred HHH------hhh---cCCCCCC-Ccc-----cccCcCCCCceeeeEEecCCCccceeCCc-eEEEEEEEECCCCChHHHH
Q 022886 100 VIQ------TRF---YKDFPPH-PKE-----QVYGFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVTDVM 163 (290)
Q Consensus 100 ~l~------~~~---~~~~~~~-~~~-----~~~~~~~~~~i~~~~i~~gg~~~n~vP~~-a~~~~~iR~~p~~~~~~~~ 163 (290)
.|+ .+. .+.+... ... .........+++++.|+ .+|++ |++.+++|++|+++.+++.
T Consensus 289 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~ 361 (470)
T 1lfw_A 289 QYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMI 361 (470)
T ss_dssp TSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHHHHH
T ss_pred hCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHHHHH
Confidence 774 211 1111000 000 00011123566666665 57999 9999999999999988888
Q ss_pred HHHHHHHHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhCCC-CccccccC
Q 022886 164 KRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYSITGT 242 (290)
Q Consensus 164 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~-~~~~~~gg 242 (290)
+.+++.+++ .+++++...+|++.+++|+++++.+++++++.+|.+ .+..++|+
T Consensus 362 ~~i~~~~~~--------------------------g~~v~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~g~ 415 (470)
T 1lfw_A 362 KQVLDKFSG--------------------------ILDVTYNGFEEPHYVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGG 415 (470)
T ss_dssp HHHHHHHTT--------------------------TEEEECSCCBCCEECCTTCHHHHHHHHHHHHHHCCCCCEEEESSC
T ss_pred HHHHHHhcC--------------------------CeEEEEEeCCCceeeCCCCHHHHHHHHHHHHHcCCCCceeeecCH
Confidence 877776642 234566677899988899999999999999988864 45567788
Q ss_pred cchHHHHhhcCCcEEEEcCC---C--Cccc---------cchHHHHHHHHHHHH
Q 022886 243 LPLIRELQDEGFDVQTAGYG---M--PPLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 243 ~d~~~~~~~~g~~~v~~Gpg---~--~~~~---------~~~~~~iy~~~~~~~ 282 (290)
+| ++++. |++.|||+ . ..|+ +...+++|..++.+.
T Consensus 416 ~d-~~~~~----~~v~~G~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 464 (470)
T 1lfw_A 416 TY-GRLFE----RGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIYAEAIYEL 464 (470)
T ss_dssp CG-GGGST----TCEECCEECTTCCCCTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred hH-HHhCC----CeEEECCCCCCCCCCCCCCCcceEHHHHHHHHHHHHHHHHHH
Confidence 77 45553 67889963 2 2343 456677777776554
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=98.90 E-value=7.5e-09 Score=89.55 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=43.4
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~ 58 (290)
+.|++.+..++++|.|+|+++||.|+. .|++.+++.......++|++|++||+..
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~ept~~ 170 (268)
T 3t68_A 116 ERFIAEHPDHQGSIGFLITSDEEGPFI--NGTVRVVETLMARNELIDMCIVGEPSST 170 (268)
T ss_dssp HHHHHHCTTCSSEEEEEEESCTTSSSC--CHHHHHHHHHHHTTCCCCEEEECSCCBS
T ss_pred HHHHHhCCCCCCcEEEEEEeCCccCcc--cCHHHHHHHHHhcCCCCCEEEEeCCCCC
Confidence 456667777889999999999999862 3999999864333456899999999854
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=98.71 E-value=5.5e-08 Score=84.10 Aligned_cols=55 Identities=15% Similarity=0.048 Sum_probs=43.3
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~ 58 (290)
+.|++.+.+++++|.|+|+++||.|+. .|++.+++.......++|++|++||+..
T Consensus 116 ~~l~~~~~~~~~~i~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~Ept~~ 170 (269)
T 4h2k_A 116 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSA 170 (269)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCCCEEEECCCCBS
T ss_pred HHHHHhCCCCCccEEEEEEeccccCcc--cCHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 456667777889999999999999872 3999998764333456899999999854
No 30
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.67 E-value=4.5e-08 Score=69.92 Aligned_cols=66 Identities=9% Similarity=0.054 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHhCC-CCccccccCcchHHHHhhcCCcEEEEcCCCC----ccc---------cchHHHHHHHHHHHH
Q 022886 217 SRGFHVLCKATEEVVGH-VNPYSITGTLPLIRELQDEGFDVQTAGYGMP----PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 217 ~~~~~~l~~a~~~~~g~-~~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~----~~~---------~~~~~~iy~~~~~~~ 282 (290)
+++++.++++++++ |. +.+..++|+|| +++|...|+|++.||||.. .|+ +.+.+++|..++.+.
T Consensus 1 ~~~v~~l~~a~~~~-g~~~~~~~~~g~TD-ar~~~~~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~~~ 78 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTLEPEIMPAAGD-NRYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPAL 78 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCEEEEECCSCSH-HHHHHHTTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHc-CCeeEeeeeceeCc-HHHHHHcCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHHHH
Confidence 57899999999998 75 45667788887 7888888999999999863 454 678899999998876
Q ss_pred Hh
Q 022886 283 WL 284 (290)
Q Consensus 283 ~~ 284 (290)
..
T Consensus 79 ~~ 80 (88)
T 1q7l_B 79 AS 80 (88)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 31
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.28 E-value=7.3e-08 Score=79.49 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=55.1
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEE---EecCCCC-CceeeeceeEEEEE
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWKL 72 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i---~~e~~~~-~i~~~~~g~~~~~v 72 (290)
++|++.+.+++++|.|+|+++||.|+. .|++++++++.++..++|+++ ++||+.. .+++++||..|++|
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 567777878899999999999999732 799999887544345568888 8899864 68899999988764
No 32
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=97.84 E-value=3.4e-05 Score=68.42 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=36.8
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~ 58 (290)
+.|++.+ ++++|.|+|+++||.|+ .|++++++ .+++|++|+.|++..
T Consensus 186 ~~l~~~~--~~~~i~~~~~~~EE~G~---~G~~~~~~-----~~~~~~~i~~d~~~~ 232 (332)
T 2wyr_A 186 KDLVDHE--LEGKVIFAFTVQEEVGL---KGAKFLAN-----HYYPQYAFAIDSFAC 232 (332)
T ss_dssp HTTTTSC--CSSEEEEEEESCGGGTS---HHHHHHTT-----TCCCSEEEEECCEEC
T ss_pred HHHhhcC--CCceEEEEEECccccCc---chHHHHhc-----ccCCCEEEEEecccc
Confidence 3455443 67899999999999998 89998863 345789999998743
No 33
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=97.74 E-value=1.3e-07 Score=83.05 Aligned_cols=219 Identities=9% Similarity=-0.019 Sum_probs=100.5
Q ss_pred CCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCCCCCCCCCCC
Q 022886 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (290)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~Hs~~p~~g~N 89 (290)
.+...+.++++.+||.++ .|.+.+......... .+....++....+..+..+......++.+...|++.+..+.|
T Consensus 114 ~~~~~~~~~~~~~ee~~~---~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (354)
T 2wzn_A 114 ERYGVVGVLPPHLRRGQE---DKGSKIDWDQIVVDV--GASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRI 188 (354)
T ss_dssp EEEEEECCCCGGGC------------CCGGGCCEEC--SCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHH
T ss_pred CccceEEEeeeeeEeccc---ccccchhhhhhhhhh--cccchhhhhccccccceeeeeeeeeEeecccccccccccccc
Confidence 345677788889999887 676666443221110 011111112233445566677777788888888776655555
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCcccccCcCCCCceeeeEEecCCCccceeCCceEEEEEEEECCCCChHHHHHHHHHH
Q 022886 90 PLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEY 169 (290)
Q Consensus 90 Ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~gg~~~n~vP~~a~~~~~iR~~p~~~~~~~~~~i~~~ 169 (290)
++..+..++..|... . ... . +........+... ++...|.++..+....+.+........
T Consensus 189 ~~~~~~~~~~~l~~~---~-~~~----~--~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (354)
T 2wzn_A 189 CLYAMIEAARQLGDH---E-ADI----Y--IVGSVQEEVGLRG-ARVASYAINPEVGIAMDVTFAKQPHDK--------- 248 (354)
T ss_dssp HHHHHHHHHHHCCCC---S-SEE----E--EEEESCGGGTSHH-HHHHHHHHCCSEEEEEEEEECCCTTST---------
T ss_pred hhhhHHHHHHHHHhc---c-ccc----c--ccccceeeeeeec-ccccccccccccceeeeeeeccccchh---------
Confidence 555555555443221 1 000 0 0000111122222 344566777777777777765432110
Q ss_pred HHHHhhcccccccCCCccccccCCCCcceeEEEEEecCCCccccCCCCHHHHHHHHHHHHHhC--CC-CccccccCcchH
Q 022886 170 VDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVG--HV-NPYSITGTLPLI 246 (290)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g--~~-~~~~~~gg~d~~ 246 (290)
.+... ............ ...+-............+ .. ....+.|||| +
T Consensus 249 -~~~~~-------------------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggTD-a 299 (354)
T 2wzn_A 249 -GKIVP-------------------ELGKGPVMDVGP--------NINPKLRAFADEVAKKYEIPLQVEPSPRPTGTD-A 299 (354)
T ss_dssp -TCCCC-------------------CTTSCCEEEEST--------TSCHHHHHHHHHHHHHTTCCCEEEECCSCCSSH-H
T ss_pred -hhhhe-------------------eecccccccccc--------ccCcchhhhhHHHHHHhcCCCceEEEecccccH-H
Confidence 00000 000111111111 112212222222222222 22 3445678888 5
Q ss_pred HHHh--hcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHHH
Q 022886 247 RELQ--DEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQKT 282 (290)
Q Consensus 247 ~~~~--~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~~ 282 (290)
++++ ..|+|++.||||.. .|+ +.+++++|..+++++
T Consensus 300 ~~~~~~~~Giptv~~G~g~~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L 347 (354)
T 2wzn_A 300 NVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 347 (354)
T ss_dssp HHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCEEEECcccCCCCcccEEEEHHHHHHHHHHHHHHHHhC
Confidence 5454 47999999999864 344 667788888887753
No 34
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.46 E-value=1.8e-05 Score=70.51 Aligned_cols=61 Identities=18% Similarity=0.091 Sum_probs=45.5
Q ss_pred CCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCCCCceeeeceeEEEEEEEEecCCCCCCCCCCCC
Q 022886 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (290)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~v~v~G~~~Hs~~p~~g~N 89 (290)
+++++|.|+|+++||.|+ .|++++++. +++|++|+.|++... ++.|+++|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 578999999999999998 899998762 356899999986432 46788899999999988
Q ss_pred HH
Q 022886 90 PL 91 (290)
Q Consensus 90 Ai 91 (290)
++
T Consensus 243 ~~ 244 (340)
T 2fvg_A 243 PA 244 (340)
T ss_dssp CE
T ss_pred cE
Confidence 53
No 35
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=97.41 E-value=0.00022 Score=63.79 Aligned_cols=65 Identities=5% Similarity=-0.052 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-c-cccccCcchHHHH--hhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHH
Q 022886 215 LDSRGFHVLCKATEEVVGHVN-P-YSITGTLPLIREL--QDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~-~-~~~~gg~d~~~~~--~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~ 280 (290)
.++++++.+++++++. |.+. . ....|++| +..| ...|+|++.+||+.. .|. +...+++|..++.
T Consensus 269 ~~~~l~~~l~~~a~~~-gi~~~~~~~~~ggsD-a~~~~~~~~GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~ 346 (353)
T 1y0y_A 269 CHPTIVRWLEELAKKH-EIPYQLEILLGGGTD-AGAIHLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALE 346 (353)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSSCCCT-HHHHTTSTTCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEeecCCCCch-HHHHHHhCCCCcEEEEcccccccCCHHHhcCHHHHHHHHHHHHHHHH
Confidence 4677888888888876 6543 2 23567888 5556 347999999999653 343 4566667766655
Q ss_pred H
Q 022886 281 K 281 (290)
Q Consensus 281 ~ 281 (290)
+
T Consensus 347 ~ 347 (353)
T 1y0y_A 347 N 347 (353)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=95.15 E-value=0.0073 Score=52.49 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=39.2
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~ 56 (290)
+.|++.+.+++++|.|+|+++||.|+ .|+++++++...+..+.+++|+.|..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 56777777899999999999999998 89999987643221123467777764
No 37
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=94.76 E-value=0.0057 Score=54.38 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=32.7
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~ 57 (290)
+.|++.+.+++++|.|+|+++||.|+ .|++.+ .+++|++|+.|++.
T Consensus 199 ~~l~~~~~~~~~~i~~~~~~~EE~G~---~g~~~~-------~~~~~~~i~~D~~~ 244 (349)
T 2gre_A 199 KRLQDENVTLPYTTHFLISNNEEIGY---GGNSNI-------PEETVEYLAVDMGA 244 (349)
T ss_dssp HHHHHHTCCCSEEEEEEEESCC-------CCCCCC-------CTTEEEEEEECCCC
T ss_pred HHHHhccCCCCceEEEEEECcccCCc---hhhccc-------ccCCCEEEEEeccc
Confidence 45666677788999999999999998 787765 23567899988864
No 38
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=93.94 E-value=0.021 Score=51.25 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=44.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-c-cccccCcchHHHH--hhcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHH
Q 022886 215 LDSRGFHVLCKATEEVVGHVN-P-YSITGTLPLIREL--QDEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~-~-~~~~gg~d~~~~~--~~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~ 280 (290)
.++++++.+++++++. |.+. . ....|++| +..| ...|+|++.|||+.. .|. +...+++|..++.
T Consensus 273 ~~~~l~~~l~~~a~~~-gi~~~~~~~~~ggtD-a~~~~~~~~GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~ 350 (373)
T 1vhe_A 273 SHKGLRDAVVATAEEA-GIPYQFDAIAGGGTD-SGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIK 350 (373)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEEEETTCCCT-HHHHTTSTTCCCEEEEEEEEBSTTSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEecCCCCCcc-HHHHHHhCCCCcEEEEccccccCCChhheecHHHHHHHHHHHHHHHH
Confidence 5678888899998886 6543 3 34567888 5556 347999999999754 343 4555666666554
Q ss_pred H
Q 022886 281 K 281 (290)
Q Consensus 281 ~ 281 (290)
.
T Consensus 351 ~ 351 (373)
T 1vhe_A 351 K 351 (373)
T ss_dssp H
T ss_pred H
Confidence 4
No 39
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=93.86 E-value=0.025 Score=48.65 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=39.2
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccc-cCCCCcEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~-~~~~d~~i~~e~~ 56 (290)
+.|++.+.+++++|.|+|+++||.|. .|+++++++...+ .-+.+++|+.|..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777899999999999999998 8999998763211 1123567777765
No 40
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=93.22 E-value=0.083 Score=47.24 Aligned_cols=6 Identities=33% Similarity=0.473 Sum_probs=3.5
Q ss_pred cCCcEE
Q 022886 252 EGFDVQ 257 (290)
Q Consensus 252 ~g~~~v 257 (290)
.|++..
T Consensus 288 ~gi~~~ 293 (373)
T 1vhe_A 288 AGIPYQ 293 (373)
T ss_dssp HTCCCE
T ss_pred cCCCeE
Confidence 476654
No 41
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=93.22 E-value=0.14 Score=45.17 Aligned_cols=65 Identities=12% Similarity=0.070 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCCc--cccccCcchHHHHh--hcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHH
Q 022886 215 LDSRGFHVLCKATEEVVGHVNP--YSITGTLPLIRELQ--DEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~~--~~~~gg~d~~~~~~--~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~ 280 (290)
.+..+++.+++++++. |.+.. ..++||+| +..+. ..|+|++.+||+.. .|. +...+++|..++.
T Consensus 257 ~~~~l~~~~~~~a~~~-gi~~~~~~~~~ggsD-a~~~~~~~~gipt~~lg~~~~~~Hs~~E~~~~~d~~~~~~ll~~~~~ 334 (348)
T 1ylo_A 257 APPKLTAWIETVAAEI-GVPLQADMFSNGGTD-GGAVHLTGTGVPTLVMGPATRHGHCAASIADCRDILQMEQLLSALIQ 334 (348)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEEECSSCCCH-HHHHHTSTTCCCEEEEECCCBSCSSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEeecCCCcch-HHHHHHhcCCCCEEEECcccCcCCCcceEeeHHHHHHHHHHHHHHHH
Confidence 5778899999999986 65432 33678888 44464 36999999999765 444 4455666666554
Q ss_pred H
Q 022886 281 K 281 (290)
Q Consensus 281 ~ 281 (290)
.
T Consensus 335 ~ 335 (348)
T 1ylo_A 335 R 335 (348)
T ss_dssp T
T ss_pred H
Confidence 3
No 42
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=91.32 E-value=0.16 Score=44.79 Aligned_cols=66 Identities=5% Similarity=-0.009 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHHHHHHhCCCC-cccc-c-cCcchHHHHh--hcCCcEEEEcCCCC-ccc---------cchHHHHHHHH
Q 022886 214 NLDSRGFHVLCKATEEVVGHVN-PYSI-T-GTLPLIRELQ--DEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTL 278 (290)
Q Consensus 214 ~~d~~~~~~l~~a~~~~~g~~~-~~~~-~-gg~d~~~~~~--~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~ 278 (290)
..+.++++.+++++++. |.+. ...+ + ||+| +..++ ..|+|++.+||+.. .|. +...+++|..+
T Consensus 253 ~~~~~l~~~~~~~a~~~-gi~~~~~~~~g~ggsD-a~~~~~~~~gipt~~lg~~~~~~Hs~~E~~~~~dl~~~~~ll~~~ 330 (346)
T 1vho_A 253 VVDRNLVQKIIEIAKKH-NVSLQEEAVGGRSGTE-TDFVQLVRNGVRTSLISIPLKYMHTPVEMVDPRDVEELARLLSLV 330 (346)
T ss_dssp TSCHHHHHHHHHHHHHT-TCCCEEESSCCC-----CTTHHHHHTTCEEEEEEEECBSTTSTTEEECHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHC-CCCEEEEeCCCCCCch-HHHHHHhCCCCcEEEEehhhcccccHHHhcCHHHHHHHHHHHHHH
Confidence 46788999999999985 6543 3334 4 7888 44453 37999999999654 444 45556666665
Q ss_pred HHH
Q 022886 279 IQK 281 (290)
Q Consensus 279 ~~~ 281 (290)
+..
T Consensus 331 ~~~ 333 (346)
T 1vho_A 331 AVE 333 (346)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 43
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=91.13 E-value=0.082 Score=46.29 Aligned_cols=52 Identities=13% Similarity=-0.029 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCcc--ccccCcchHHHHh--hcCCcEEEEcCCCC-ccc
Q 022886 214 NLDSRGFHVLCKATEEVVGHVNPY--SITGTLPLIRELQ--DEGFDVQTAGYGMP-PLQ 267 (290)
Q Consensus 214 ~~d~~~~~~l~~a~~~~~g~~~~~--~~~gg~d~~~~~~--~~g~~~v~~Gpg~~-~~~ 267 (290)
+.+.++++.+++++++. |.+... ...||||. ..++ ..|+|++.+||+.. .|.
T Consensus 241 ~~~~~l~~~~~~~a~~~-gi~~q~~~~~~GGsD~-~~~~~s~~Gipt~~lG~~~~~~Hs 297 (321)
T 3cpx_A 241 IPRKKYVNRIIELARQT-DIPFQLEVEGAGASDG-RELQLSPYPWDWCFIGAPEKDAHT 297 (321)
T ss_dssp CCCHHHHHHHHHHHTTS-SCCEEEEECSSCCCHH-HHHHHSSSCCBCCBEECEEBSTTS
T ss_pred CCCHHHHHHHHHHHHHc-CCCEEEEeCCCCCccH-HHHHHhCCCCCEEEEchhhcccch
Confidence 36788899999999885 654322 26788884 4453 47999999999543 444
No 44
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=90.13 E-value=0.13 Score=47.12 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=32.0
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHcc
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~ 40 (290)
+.|++.+.+++++|.|+|..+||.|. .|+++++++.
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~ 317 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEH 317 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHT
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhh
Confidence 56777788899999999999999998 8999999865
No 45
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=88.03 E-value=0.44 Score=41.41 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=34.3
Q ss_pred hhcccccCCCceeEEEEEEecccCCCC--C--------cccHHHHHHccccccCCCCcEEEecC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAI--T--------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~--~--------~~G~~~l~~~~~~~~~~~d~~i~~e~ 55 (290)
+.|++.+ ++++|.|+|..+||.|.. . ..|++++++.......+..+.|+.|-
T Consensus 140 r~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 140 RQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp HHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhCC--CCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 4455553 889999999999999850 0 05999998764322223445666664
No 46
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=86.94 E-value=0.5 Score=41.18 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=33.1
Q ss_pred hhcccccCCCceeEEEEEEecccCCCC-----------CcccHHHHHHccccccCCCCcEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAI-----------TGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~-----------~~~G~~~l~~~~~~~~~~~d~~i~~e~~ 56 (290)
+.|++. .++++|.|+|..+||.|.. ...|++++++.......+..+.|+.|-.
T Consensus 142 r~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~ 205 (314)
T 3gux_A 142 RQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMV 205 (314)
T ss_dssp HHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESC
T ss_pred HHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEecc
Confidence 455555 3889999999999998750 0059999987643222234456666643
No 47
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=86.33 E-value=0.51 Score=41.40 Aligned_cols=64 Identities=8% Similarity=0.049 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHHHhCCCC-c-cccccCcchHHHHhh--cCCcEEEEcCCCC-ccc---------cchHHHHHHHHHHH
Q 022886 216 DSRGFHVLCKATEEVVGHVN-P-YSITGTLPLIRELQD--EGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQK 281 (290)
Q Consensus 216 d~~~~~~l~~a~~~~~g~~~-~-~~~~gg~d~~~~~~~--~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~~ 281 (290)
+..+.+.+++++++. |.+. . ....|++|. ..|.. .|+|++.|||+.. .|. +...+++|..++.+
T Consensus 255 ~~~l~~~l~~~a~~~-gi~~~~~~~~~ggtDa-~~~~~~~~GiP~v~~g~~~~~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 332 (340)
T 2fvg_A 255 PKEIFQTIVDTAKNN-DIPFQMKRRTAGGTDA-GRYARTAYGVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEE 332 (340)
T ss_dssp CHHHHHHHHHHHHHT-TCCCEECCCC--------------CCSCEEEEEEEEEESSTTCEEEEHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCeEEEecCCCCccH-HHHHhhCCCCcEEEecccccccCChhhcccHHHHHHHHHHHHHHHHh
Confidence 445777788887764 6442 2 245678884 44654 7999999999764 343 45666777666554
No 48
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=81.59 E-value=0.94 Score=39.64 Aligned_cols=39 Identities=26% Similarity=0.163 Sum_probs=30.8
Q ss_pred CceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC
Q 022886 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (290)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~ 57 (290)
++.++.++|+++||.|+ .|++.... .+.+|+++..|++.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~-----~i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATR-----AVSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHH-----HHCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhc-----ccCCCEEEEEeccc
Confidence 56899999999999998 88877643 23468899888763
No 49
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=79.33 E-value=0.86 Score=39.83 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=23.3
Q ss_pred cCCCceeEEEEEEecccC--------CCCCcccHHHHHHc
Q 022886 8 KLKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (290)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~--------g~~~~~G~~~l~~~ 39 (290)
+.+++++|.|+|..+||. |. .|+++++++
T Consensus 154 g~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~ 190 (329)
T 2afw_A 154 DSKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAK 190 (329)
T ss_dssp ---CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHH
T ss_pred cCCCCccEEEEEecCcccccccCCCccc---hhHHHHHHH
Confidence 357899999999999998 55 799999875
No 50
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=75.59 E-value=1.3 Score=38.83 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.8
Q ss_pred CceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC
Q 022886 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (290)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~ 56 (290)
++.++.++|+.+||.|+ .|++... ..+++|++|+.|++
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~~ 229 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDVT 229 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeecc
Confidence 56899999999999997 7877643 24567889888864
No 51
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=74.48 E-value=1.5 Score=39.74 Aligned_cols=50 Identities=16% Similarity=0.266 Sum_probs=34.3
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccC-CCCcEEEecCC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTA 56 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~-~~d~~i~~e~~ 56 (290)
+.|++ ..++++|.|++..+||.|. .|+++++++...+.. +..+.|+.|..
T Consensus 253 ~~l~~--~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 253 RVMSK--LKTDTELRFITFGAEENGL---IGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp HHHTT--SCCSSEEEEEEESSSTTTS---HHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred HHHhc--cCCCceEEEEEECCccccc---hhHHHHHHhCccchhhcEEEEEEeccc
Confidence 34554 3578999999999999998 899999876321100 12356777764
No 52
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=74.23 E-value=1.7 Score=38.53 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=28.5
Q ss_pred CCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecC
Q 022886 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (290)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~ 55 (290)
+++.++.++|+.-||.|+ .|++.... .+.||.+|..|.
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~-----~~~pd~~i~~D~ 238 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTT-----KFDPEVFLAVDC 238 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHH-----HHCCSEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHh-----ccCCCEEEEecC
Confidence 478999999999999998 88776643 234677665554
No 53
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=74.05 E-value=3.9 Score=36.11 Aligned_cols=65 Identities=6% Similarity=-0.076 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCCcc-c-cc-cCcchHHHHh-hcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHH
Q 022886 215 LDSRGFHVLCKATEEVVGHVNPY-S-IT-GTLPLIRELQ-DEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~~~-~-~~-gg~d~~~~~~-~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~ 280 (290)
.|..+.+.+++++++. |.+... . .. ||||.+.+.. ..|+|++.+|++.. .|. +...++++..+++
T Consensus 267 ~~~~l~~~l~~~a~~~-gIp~q~~~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~~~Hs~~E~~~~~D~~~~~~ll~~~l~ 345 (354)
T 2vpu_A 267 INPKLRAFADEVAKKY-EIPLQVEPSPRPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLE 345 (354)
T ss_dssp SCHHHHHHHHHHHHHT-TCCCEEEECCSCCSSTHHHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCcEEEeCCCCCccHHHHHHHhcCCCCEEEECcccccCcCcceEeeHHHHHHHHHHHHHHHH
Confidence 4677888899999885 654322 2 34 6888555332 36999999997433 443 4455555555544
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=72.58 E-value=1.7 Score=41.65 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=28.0
Q ss_pred ccCCCceeEEEEEEecccCCCCCcccHHHHHHcc
Q 022886 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (290)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~ 40 (290)
.+.+++++|.|++..+||.|. .|+++++++.
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhh
Confidence 477899999999999999998 8999999864
No 55
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=71.25 E-value=4.7 Score=34.68 Aligned_cols=52 Identities=10% Similarity=0.131 Sum_probs=33.8
Q ss_pred hhcccccCCCceeEEEEEEecccCCCC--C---------cccHHHHHHccccccCCCCcEEEecC
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAI--T---------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~--~---------~~G~~~l~~~~~~~~~~~d~~i~~e~ 55 (290)
+.|.+. +++++|.|+|..+||.|.. + ..|++++++.......+..+.|+.|-
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDm 202 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDM 202 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECS
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeec
Confidence 345443 6789999999999998731 0 05888888764333333445666664
No 56
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=70.52 E-value=3.3 Score=35.69 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=25.8
Q ss_pred cCCCceeEEEEEEecccCCCCC-----cccHHHHHHcc
Q 022886 8 KLKLKSTVIAVFIASEENSAIT-----GVGVDALVKDG 40 (290)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~g~~~-----~~G~~~l~~~~ 40 (290)
+.+++++|.|+|..+||.|... ..|+++++++.
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKL 164 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccccChHHHHHHH
Confidence 5578999999999999987110 06999998764
No 57
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=69.43 E-value=2.2 Score=37.70 Aligned_cols=44 Identities=11% Similarity=-0.048 Sum_probs=31.7
Q ss_pred hcccccCCCceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecC
Q 022886 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (290)
Q Consensus 3 ~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~ 55 (290)
.|++... ++.++.++|+.-||.|+ .|++.... .+.+|.+|..|.
T Consensus 196 ~l~~l~~-~~~~v~~~ft~qEEVG~---~ga~~aa~-----~i~pd~~i~~Dv 239 (354)
T 2vpu_A 196 AARQLGD-HEADIYIVGSVQEEVGL---RGARVASY-----AINPEVGIAMDV 239 (354)
T ss_dssp HHHHCCC-CSSEEEEEECSCCTTTS---HHHHHHHH-----HHCCSEEEEEEE
T ss_pred HHHHhhc-CCCeEEEEEECCcccCc---cchhhhhc-----ccCCCEEEEecc
Confidence 3444432 78899999999999998 88776542 235678887664
No 58
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=68.49 E-value=3.4 Score=36.52 Aligned_cols=65 Identities=18% Similarity=0.115 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-ccccccCcchHHHHh-hcCCcEEEEcCCCC-ccc---------cchHHHHHHHHHH
Q 022886 215 LDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQ-DEGFDVQTAGYGMP-PLQ---------FTSFHSVYKTLIQ 280 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~-~~~~~gg~d~~~~~~-~~g~~~v~~Gpg~~-~~~---------~~~~~~iy~~~~~ 280 (290)
.|..+.+.+++++++. |.+. ...++||||.+.+.. ..|+|++.+|++.. .|. +...++++..++.
T Consensus 266 ~~~~l~~~l~~~a~~~-gIp~q~~~~ggGtDa~~i~~a~~Gipt~~igvp~~~~Hs~~E~~~~~Di~~~~~ll~~~l~ 342 (355)
T 3kl9_A 266 LLPGMKDFLLTTAEEA-GIKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVK 342 (355)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSSCCTHHHHTTSTTCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEECCCcchHHHHHHHhCCCCCEEEEccCcCCCCCcceEeeHHHHHHHHHHHHHHHH
Confidence 5677889999999885 6542 234568898555332 36999999996432 443 4445555555543
No 59
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=67.12 E-value=2.5 Score=40.95 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=28.0
Q ss_pred ccCCCceeEEEEEEecccCCCCCcccHHHHHHcc
Q 022886 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (290)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~ 40 (290)
.|++++++|.|++..+||.|. .|+++++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~~ 395 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEEN 395 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHhc
Confidence 578899999999999999998 8999999854
No 60
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=66.59 E-value=5.5 Score=34.99 Aligned_cols=47 Identities=15% Similarity=0.068 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCcc--ccccCcchHHHHh-hcCCcEEEEcCCC
Q 022886 216 DSRGFHVLCKATEEVVGHVNPY--SITGTLPLIRELQ-DEGFDVQTAGYGM 263 (290)
Q Consensus 216 d~~~~~~l~~a~~~~~g~~~~~--~~~gg~d~~~~~~-~~g~~~v~~Gpg~ 263 (290)
|..+.+.+++++++. |.+... .++||||.+.+.. ..|+|++.+|++.
T Consensus 266 d~~l~~~l~~~A~~~-gIp~Q~~v~~ggGTDa~~i~~a~~Gipt~~Igvp~ 315 (343)
T 3isx_A 266 SKRILENLIEIAEKF-DIKYQMEVLTFGGTNAMGYQRTREGIPSATVSIPT 315 (343)
T ss_dssp HHHHHHHHHHHHHHT-TCCCEECCCBCCCSSHHHHHHHTSSCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHC-CCCeEEecCCCCchHHHHHHHhcCCCCEEEEcccc
Confidence 456778888888875 654322 3468899655433 3799999999643
No 61
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=65.87 E-value=2.9 Score=36.61 Aligned_cols=29 Identities=28% Similarity=0.280 Sum_probs=25.4
Q ss_pred cCCCceeEEEEEEecccC--------CCCCcccHHHHHHc
Q 022886 8 KLKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (290)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~--------g~~~~~G~~~l~~~ 39 (290)
+..++++|.|+|..+||. |. .|++++++.
T Consensus 158 ~~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 158 KQAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp HTTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred cCCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 357899999999999999 76 899999874
No 62
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=64.15 E-value=4.7 Score=35.14 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=25.5
Q ss_pred ccCCCceeEEEEEEecccCCCCC-----cccHHHHHHc
Q 022886 7 TKLKLKSTVIAVFIASEENSAIT-----GVGVDALVKD 39 (290)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~-----~~G~~~l~~~ 39 (290)
.+.+++++|.|+|..+||.|... ..|++++++.
T Consensus 150 ~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 150 PLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp GGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred ccCCCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 34578999999999999987310 0499999875
No 63
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=61.40 E-value=3.7 Score=35.57 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=27.9
Q ss_pred EEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCCC
Q 022886 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (290)
Q Consensus 15 i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~~ 57 (290)
+.++|+++||.|+ .|++.+... ..+.+++|++++.|++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 8899999999998 788754310 01124578999999864
No 64
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=58.08 E-value=3.7 Score=36.13 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=28.4
Q ss_pred ceeEEEEEEecccCCCCCcccHHHHHHccccccCCCCcEEEecCC
Q 022886 12 KSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (290)
Q Consensus 12 ~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~i~~e~~ 56 (290)
+.++.++|+.-||.|+ .|++... ..+.||.+|..|.+
T Consensus 198 ~~~~~~~ft~qEEVG~---~Ga~~aa-----~~i~pd~~i~vDv~ 234 (343)
T 3isx_A 198 AVTLYGVFSVQEEVGL---VGASVAG-----YGVPADEAIAIDVT 234 (343)
T ss_dssp SSEEEEEEECCCCTTS---CCSTTTG-----GGCCCSEEEEEEEE
T ss_pred CCeEEEEEECCcccCc---hhHHHHh-----hcCCCCEEEEEeCc
Confidence 6899999999999998 7876442 24567888877753
No 65
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=54.07 E-value=12 Score=32.67 Aligned_cols=51 Identities=6% Similarity=-0.207 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-c-cccccCcchHHHHh--hcCCcEEEEcCCCC-ccc
Q 022886 215 LDSRGFHVLCKATEEVVGHVN-P-YSITGTLPLIRELQ--DEGFDVQTAGYGMP-PLQ 267 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~-~-~~~~gg~d~~~~~~--~~g~~~v~~Gpg~~-~~~ 267 (290)
.+..+.+.+++++++. |.+. . ....||+|. ..+. ..|+|++.+|++.. .|.
T Consensus 267 ~~~~l~~~l~~~a~~~-gi~~q~~~~~ggGsDa-~~~~~~~~GiPt~~lg~~~~~~Hs 322 (349)
T 2gre_A 267 YHYALRKHLVELAKTN-HIEYKVDIYPYYGSDA-SAAIRAGFDVKHALIGAGIDSSHA 322 (349)
T ss_dssp CCHHHHHHHHHHHHHH-TCCEEEEECSCC---------CCSSSCEEEEEEECCBSTTS
T ss_pred CCHHHHHHHHHHHHHc-CCCcEEeccCCCCccH-HHHHHhCCCCcEEEeccCcccccc
Confidence 4567888898998886 6542 2 346678884 4353 36999999997544 444
No 66
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=51.24 E-value=25 Score=31.99 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCC---cc-c--cccCcchHHHHhhcCCcEEEEcC
Q 022886 215 LDSRGFHVLCKATEEVVGHVN---PY-S--ITGTLPLIRELQDEGFDVQTAGY 261 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~---~~-~--~~gg~d~~~~~~~~g~~~v~~Gp 261 (290)
.+..+...+++++++. |.+. .. . +.||+|.+.+....|+|++.+|.
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGi 419 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGP 419 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEech
Confidence 4566777888888886 6542 22 1 45677767766557999999996
No 67
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=39.73 E-value=45 Score=21.79 Aligned_cols=32 Identities=9% Similarity=0.164 Sum_probs=25.8
Q ss_pred CCceEEEEEEEECCCCChHHHHHHHHHHHHHH
Q 022886 142 PGECTVSGDVRLTPFYNVTDVMKRLQEYVDDI 173 (290)
Q Consensus 142 P~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~ 173 (290)
-|.-.+++|+|...+...+..++++++.+.+.
T Consensus 14 rdgqeieidirvstgkeleralqelekalara 45 (96)
T 2jvf_A 14 RDGQEIEIDIRVSTGKELERALQELEKALARA 45 (96)
T ss_dssp ETTEEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred eCCeEEEEEEEEcccHHHHHHHHHHHHHHHhc
Confidence 45578999999998888888888888887764
No 68
>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}
Probab=35.68 E-value=98 Score=25.09 Aligned_cols=71 Identities=13% Similarity=-0.059 Sum_probs=34.6
Q ss_pred EEecCCCccccCCCCHHHHHHHHHHHHHhCCC----CccccccCcchHHHHhhcCCcEEEEcCCCCccccchHHHHHHHH
Q 022886 203 TFDEATNGVACNLDSRGFHVLCKATEEVVGHV----NPYSITGTLPLIRELQDEGFDVQTAGYGMPPLQFTSFHSVYKTL 278 (290)
Q Consensus 203 ~~~~~~p~~~~~~d~~~~~~l~~a~~~~~g~~----~~~~~~gg~d~~~~~~~~g~~~v~~Gpg~~~~~~~~~~~iy~~~ 278 (290)
.+....+...-+.+.++.+.+.++ +|.+ ..+...|+.+ .+..+.|||++++=-+.. +..+.++.+...
T Consensus 161 slHs~~~~i~~p~~~~~a~~la~~----~g~~~~~~~~y~~~Gs~~--d~a~~~gip~iT~ELp~~--~~d~~~e~~~~a 232 (243)
T 4axv_A 161 SFHEPLAFVDDPAHSDLAKWLGKQ----FNLPIVDDVDYETPGSFG--TWCNERQLPCITVELPPI--SADLTIEKHLDA 232 (243)
T ss_dssp EEECSSCEEECSSSCHHHHHHHHH----HTCCEECCSSSSSTTCHH--HHHHHTTCCEEEEECCSC--CHHHHHHHHHHH
T ss_pred EecCCcccccCCcchHHHHHHHHH----hCCCcccccCCCCCCCHH--HHHHHCCCcEEEEeCCCC--cCcHHHHHHHHH
Confidence 333344444444556665555443 4532 2334455542 334567999998853222 233344444444
Q ss_pred HHH
Q 022886 279 IQK 281 (290)
Q Consensus 279 ~~~ 281 (290)
+..
T Consensus 233 i~~ 235 (243)
T 4axv_A 233 FIA 235 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 69
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=32.66 E-value=1.1e+02 Score=28.13 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCc-cc-----cccCcchHHHHh-hcCCcEEEEcC---CCCccc-------cchHHHHHHHH
Q 022886 216 DSRGFHVLCKATEEVVGHVNP-YS-----ITGTLPLIRELQ-DEGFDVQTAGY---GMPPLQ-------FTSFHSVYKTL 278 (290)
Q Consensus 216 d~~~~~~l~~a~~~~~g~~~~-~~-----~~gg~d~~~~~~-~~g~~~v~~Gp---g~~~~~-------~~~~~~iy~~~ 278 (290)
|......+++++++. |.+.. +. .+||| .+.+.. ..|+|++.+|. ..|++- +...++++..+
T Consensus 405 ~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgT-ig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af 482 (496)
T 3vat_A 405 NAVSEALIREVASSV-GVPLQDLMVRNDSPCGTT-IGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGF 482 (496)
T ss_dssp CHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCC-HHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcch-HHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHH
Confidence 566778888888886 65422 21 23454 455444 47999999997 344332 45556666655
Q ss_pred HHH
Q 022886 279 IQK 281 (290)
Q Consensus 279 ~~~ 281 (290)
+.+
T Consensus 483 ~~~ 485 (496)
T 3vat_A 483 FEL 485 (496)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 70
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=28.42 E-value=80 Score=25.38 Aligned_cols=37 Identities=27% Similarity=0.499 Sum_probs=26.6
Q ss_pred HhhcCCcEEEEcCCCC---------ccc----cchHHHHHHHHHHHHHhh
Q 022886 249 LQDEGFDVQTAGYGMP---------PLQ----FTSFHSVYKTLIQKTWLI 285 (290)
Q Consensus 249 ~~~~g~~~v~~Gpg~~---------~~~----~~~~~~iy~~~~~~~~~~ 285 (290)
+++.|+++.+||.|+. .++ -....++|..|..+...+
T Consensus 46 L~k~Gf~V~SfGTGs~VkLPGps~d~PnvY~FgT~Y~~iy~dL~~kd~~l 95 (214)
T 4h3k_B 46 LSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKEL 95 (214)
T ss_dssp HHHTTCEEEEEECSSSEEECCSSTTCCEEECTTSCHHHHHHHHHHHHHHH
T ss_pred HHHCCCceEeecCCCccCCCCCCCCCCCccCCCCCHHHHHHHHHhHCHHH
Confidence 5668999999997765 122 246789999988876543
No 71
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=27.71 E-value=85 Score=24.91 Aligned_cols=38 Identities=26% Similarity=0.389 Sum_probs=26.5
Q ss_pred HHhhcCCcEEEEcCCCC---------ccc----cchHHHHHHHHHHHHHhh
Q 022886 248 ELQDEGFDVQTAGYGMP---------PLQ----FTSFHSVYKTLIQKTWLI 285 (290)
Q Consensus 248 ~~~~~g~~~v~~Gpg~~---------~~~----~~~~~~iy~~~~~~~~~~ 285 (290)
.+++.|.++.+||.|.. .++ -...-++|..|..+...+
T Consensus 29 ~L~k~G~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~l 79 (198)
T 3p9y_A 29 FLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLESKDKEF 79 (198)
T ss_dssp HHHHTTCEEEEEECSSSEEECCSSTTCCEEECTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceeecCCCceeEcCCCCCCCCCccCCCCcHHHHHHHHHHhhHHH
Confidence 35667888888887765 122 246788999988876554
No 72
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=27.62 E-value=37 Score=30.95 Aligned_cols=51 Identities=10% Similarity=-0.035 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-ccc------cccCcchHHHHhhcCCcEEEEcCCCC-ccc
Q 022886 215 LDSRGFHVLCKATEEVVGHVN-PYS------ITGTLPLIRELQDEGFDVQTAGYGMP-PLQ 267 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~-~~~------~~gg~d~~~~~~~~g~~~v~~Gpg~~-~~~ 267 (290)
.|..+.+.+++++++. |.+. .+. ..||| .+..+...|+|++.+|+... +|.
T Consensus 377 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT-~~~~~a~~Gi~tvdiGiP~~~mHS 435 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGT-VAKFLAGYGIRTIDMGPAVISMHS 435 (458)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHH-HHHHHHHHTCEEEEECCEEBSTTS
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCc-HHHHHhCCCCCEEEEchhhcccch
Confidence 4677888899999987 6542 211 33555 46656668999999998544 444
No 73
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=23.80 E-value=27 Score=31.59 Aligned_cols=52 Identities=6% Similarity=-0.130 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCC---ccc--cccCcchHHHHh-hcCCcEEEEcCCCC-ccc
Q 022886 215 LDSRGFHVLCKATEEVVGHVN---PYS--ITGTLPLIRELQ-DEGFDVQTAGYGMP-PLQ 267 (290)
Q Consensus 215 ~d~~~~~~l~~a~~~~~g~~~---~~~--~~gg~d~~~~~~-~~g~~~v~~Gpg~~-~~~ 267 (290)
.|..+.+.+++++++. |.+. .+. +.||+|.+.+.. ..|+|++.+|+... +|.
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~~mHS 401 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFAMHS 401 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCCSCSS
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhcccch
Confidence 3556777788888885 6542 111 557777666444 47999999998654 444
No 74
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=22.01 E-value=2.2e+02 Score=26.69 Aligned_cols=65 Identities=6% Similarity=-0.071 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHHh-----CCCC-ccc-----cccCcchHHHHh-hcCCcEEEEcC---CCCccc-------cchHHH
Q 022886 216 DSRGFHVLCKATEEVV-----GHVN-PYS-----ITGTLPLIRELQ-DEGFDVQTAGY---GMPPLQ-------FTSFHS 273 (290)
Q Consensus 216 d~~~~~~l~~a~~~~~-----g~~~-~~~-----~~gg~d~~~~~~-~~g~~~v~~Gp---g~~~~~-------~~~~~~ 273 (290)
+..++..+++++++.. |.+. .+. .+|||+ +.+.. ..|+|++.+|. ..|++. +...++
T Consensus 473 n~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTi-g~i~~s~~GIpTvdIGiP~ryMHS~~E~~~~~Dv~~~vk 551 (571)
T 4eme_A 473 SPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTV-GSMVAANLSMPGIDIGIPQLAMHSIREIAAVHDVFFLIK 551 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCS-HHHHHHHHTCCEEEEECEEESTTSSSEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchH-HHHHHhCCCCcEEEechhhhccchHHHHhhHHHHHHHHH
Confidence 5678888888888762 4331 111 245555 55444 47999999996 344332 445555
Q ss_pred HHHHHHHH
Q 022886 274 VYKTLIQK 281 (290)
Q Consensus 274 iy~~~~~~ 281 (290)
++..++.+
T Consensus 552 Ll~aFl~~ 559 (571)
T 4eme_A 552 GVFAFYTY 559 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555544
No 75
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=21.22 E-value=90 Score=28.07 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=21.7
Q ss_pred hhcccccCCCceeEEEEEEecccCCCCCcccHHHH
Q 022886 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDAL 36 (290)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l 36 (290)
++|++.. ..+.++.++| .-||.|+ .|+.-.
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA 274 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGA 274 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHH
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhh
Confidence 4555544 5667888888 8999998 777654
No 76
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=21.02 E-value=68 Score=19.49 Aligned_cols=29 Identities=7% Similarity=0.228 Sum_probs=22.1
Q ss_pred CCceEEEEEEEECCCCChHHHHHHHHHHHHHHh
Q 022886 142 PGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (290)
Q Consensus 142 P~~a~~~~~iR~~p~~~~~~~~~~i~~~l~~~~ 174 (290)
-|..++.+|.+-. +.++++.|+..+++..
T Consensus 20 Gd~Vsf~Ld~~~i----P~~~IeKIE~lL~e~~ 48 (52)
T 3kz5_E 20 GDKMVLNLDRSRV----PTECIEKIEAILKELE 48 (52)
T ss_dssp TTEEEEEEETTTS----CHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeccccC----CHHHHHHHHHHHHHHh
Confidence 3567888886555 4899999999998754
No 77
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=20.20 E-value=52 Score=22.30 Aligned_cols=28 Identities=7% Similarity=0.023 Sum_probs=23.8
Q ss_pred eEEEEEEEECCCCChHHHHHHHHHHHHH
Q 022886 145 CTVSGDVRLTPFYNVTDVMKRLQEYVDD 172 (290)
Q Consensus 145 a~~~~~iR~~p~~~~~~~~~~i~~~l~~ 172 (290)
|.+.+-+|.+++.+-.++.+.|.+.++-
T Consensus 12 ~~~tvairvp~~~~y~~L~~~l~~kL~l 39 (83)
T 1oey_A 12 YKYTVVMKTQPGLPYSQVRDMVSKKLEL 39 (83)
T ss_dssp SSSEEEEEECTTCCHHHHHHHHHHHTTC
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 5577889999999999999888888863
Done!