BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022887
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Query: 113 FSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG-LTEFKNEMM 171
FSL + A++NFS + LG GGFG VYKGRL +G VAVKRL + QG +F+ E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFY-PKKKRLLGWQARVRIIEG 230
+I+ HR+L+RL G C+ E +L+Y YM N S+ L P+ + L W R RI G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
A+GL YLH + +IIHRD+KA+NILLD + + DFG+A++
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 113 FSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG-LTEFKNEMM 171
FSL + A++NF + LG GGFG VYKGRL +G VAVKRL + QG +F+ E+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFY-PKKKRLLGWQARVRIIEG 230
+I+ HR+L+RL G C+ E +L+Y YM N S+ L P+ + L W R RI G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
A+GL YLH + +IIHRD+KA+NILLD + + DFG+A++
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 9/187 (4%)
Query: 93 KHKEKDGEGNDKSKDSWLPLFS-----LASVSAATENFSTQCKLGEGGFGPVYKGRLLNG 147
K+ + ND S+L F L + AT NF + +G G FG VYKG L +G
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 148 QEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLD 207
+VA+KR + +S QG+ EF+ E+ ++ +H HLV L G C E+ E ILIY+YM N +L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 208 VFLFYPKKKRL-LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI 266
L+ + + W+ R+ I G A+GL YLH + IIHRD+K+ NILLD + PKI
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKI 180
Query: 267 SDFGMAR 273
+DFG+++
Sbjct: 181 TDFGISK 187
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 9/187 (4%)
Query: 93 KHKEKDGEGNDKSKDSWLPLFS-----LASVSAATENFSTQCKLGEGGFGPVYKGRLLNG 147
K+ + ND S+L F L + AT NF + +G G FG VYKG L +G
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 148 QEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLD 207
+VA+KR + +S QG+ EF+ E+ ++ +H HLV L G C E+ E ILIY+YM N +L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 208 VFLFYPKKKRL-LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI 266
L+ + + W+ R+ I G A+GL YLH + IIHRD+K+ NILLD + PKI
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKI 180
Query: 267 SDFGMAR 273
+DFG+++
Sbjct: 181 TDFGISK 187
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 107 DSWLPLFSLASVSAATENFSTQC------KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG 160
D+ FS + T NF + K+GEGGFG VYKG +N VAVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 161 QGLTE----FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKK 216
E F E+ ++AK QH +LV L G + + L+Y YMPN SL L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 217 RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
L W R +I +G A G+ +LH+ IHRD+K++NILLD KISDFG+AR
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 277 GDELQGNTKRIVGT 290
RIVGT
Sbjct: 185 KFAQTVMXSRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 107 DSWLPLFSLASVSAATENFSTQC------KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG 160
D+ FS + T NF + K+GEGGFG VYKG +N VAVK+L+
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 161 QGLTE----FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKK 216
E F E+ ++AK QH +LV L G + + L+Y YMPN SL L
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 217 RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
L W R +I +G A G+ +LH+ IHRD+K++NILLD KISDFG+AR
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 277 GDELQGNTKRIVGT 290
RIVGT
Sbjct: 179 KFAQXVMXXRIVGT 192
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 107 DSWLPLFSLASVSAATENFSTQC------KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG 160
D+ FS + T NF + K+GEGGFG VYKG +N VAVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 161 QGLTE----FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKK 216
E F E+ ++AK QH +LV L G + + L+Y YMPN SL L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 217 RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
L W R +I +G A G+ +LH+ IHRD+K++NILLD KISDFG+AR
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 277 GDELQGNTKRIVGT 290
RIVGT
Sbjct: 185 KFAQTVMXXRIVGT 198
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 113 FSLASVSAATENFSTQC------KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTE- 165
FS + T NF + K GEGGFG VYKG +N VAVK+L+ E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 166 ---FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQ 222
F E+ + AK QH +LV L G + + L+Y Y PN SL L L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
R +I +G A G+ +LH+ IHRD+K++NILLD KISDFG+AR
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 283 NTKRIVGT 290
RIVGT
Sbjct: 182 XXSRIVGT 189
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L+ +G + EF +E +++A + H HLVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ L+ + MP+ L ++ + K +G Q + IA+G++YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
R++HRDL A N+L+ S + KI+DFG+AR+ GDE + N
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 12/160 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L+ +G + EF +E +++A + H HLVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ L+ + MP+ L + + K +G Q + IA+G++YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCL--LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
R++HRDL A N+L+ S + KI+DFG+AR+ GDE + N
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + + +F E ++ KL H LV+L+G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L++E+M + L +L ++ L + + + + +G+ YL + S +IHR
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHR 127
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 130 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
+LGEG FG V+ LL Q+ VAVK L S +F+ E L+ LQH+H+VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRL----------LGWQARVRIIEGI 231
FG C E ++++EYM + L+ FL P K L LG + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD 278
A G++YL + L +HRDL N L+ + KI DFGM+R I+ D
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 130 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
+LGEG FG V+ LL Q+ VAVK L S +F+ E L+ LQH+H+VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRL----------LGWQARVRIIEGI 231
FG C E ++++EYM + L+ FL P K L LG + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD 278
A G++YL + L +HRDL N L+ + KI DFGM+R I+ D
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + + +F E ++ KL H LV+L+G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L++E+M + L +L ++ L + + + + +G+ YL + +IHR
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + + +F E ++ KL H LV+L+G C+
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L++E+M + L +L ++ L + + + + +G+ YL + +IHR
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 130 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
+LGEG FG V+ LL Q+ VAVK L S +F+ E L+ LQH+H+VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRL----------LGWQARVRIIEGI 231
FG C E ++++EYM + L+ FL P K L LG + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD 278
A G++YL + L +HRDL N L+ + KI DFGM+R I+ D
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + + +F E ++ KL H LV+L+G C+
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L++E+M + L +L ++ L + + + + +G+ YL + +IHR
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + S +F E ++ KL H LV+L+G C+
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L++E+M + L +L ++ L + + + + +G+ YL + +IHR
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN---GQE---VAVKRLSNQSGQGLTEFKNEMMLIAKL 176
N + +LGEG FG V+ N Q+ VAVK L + S +F E L+ L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR----------VR 226
QH H+V+ +G C+E I+++EYM + L+ FL +L + +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I + IA G++YL + +HRDL N L+ ++ KI DFGM+R
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG V+ G LN +VA+K + + +F E ++ KL H LV+L+G C+
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
EQ L+ E+M + L +L ++ L + + + + +G+ YL + +IHR
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L+ + K+SDFGM R D+ +T
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG+AR+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 17/165 (10%)
Query: 131 LGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LGEG FG V R G++VAVK L +SG + + K E+ ++ L H ++V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 185 FGCCIEQGEN--ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL--HQ 240
G C E G N LI E++P+ SL +L PK K + + +++ I +G+ YL Q
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTK 285
Y +HRDL A N+L++S+ KI DFG+ + D+ K
Sbjct: 147 Y-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 78
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 134
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNE 164
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 85
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 141
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNE 171
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 82
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 138
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNE 168
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 17/165 (10%)
Query: 131 LGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LGEG FG V R G++VAVK L +SG + + K E+ ++ L H ++V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 185 FGCCIEQGEN--ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL--HQ 240
G C E G N LI E++P+ SL +L PK K + + +++ I +G+ YL Q
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTK 285
Y +HRDL A N+L++S+ KI DFG+ + D+ K
Sbjct: 135 Y-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 79
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 135
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNE 165
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 86
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 142
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNE 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 87
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 143
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNE 173
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNE 158
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
KLG G FG V+ G N +VAVK L + + F E L+ LQH LVRL+
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
++ +I E+M SL FL + ++L + IA+G+ Y+ R IHR
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+N+L+ + KI+DFG+AR+ +E
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNE 163
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G N +VAVK L + + F E L+ LQH LVRL+
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ +I EYM SL FL + ++L + IA+G+ Y+ R IHR
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIHR 134
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+N+L+ + KI+DFG+AR+ +E
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNE 164
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 72
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASG 130
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 131 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 89
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 147
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 148 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 130 KLGEGGFGPVYKGRLLNGQE------VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
+LGEG FG V+ N VAVK L + + +F+ E L+ LQH H+V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFY------------PKK-KRLLGWQARVRIIEG 230
+G C + I+++EYM + L+ FL P++ K LG + I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IA G++YL + +HRDL N L+ +++ KI DFGM+R
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLTEFKNEMMLIAKLQH 178
N S +G G FG V GRL L ++ VA+K L + + +F E ++ + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+++RL G + +++ EYM N SLD FL K V ++ GIA G+ YL
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 162 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 128 QCKLGEGGFGPVYKGRLLNGQ-----EVAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHL 181
Q +G G FG VYKG L VA+K L + + + +F E ++ + H ++
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL G + ++I EYM N +LD FL +K V ++ GIA G+ YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ + +HRDL A NIL++S++ K+SDFG++R+ D
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 131 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHL 181
LGEG FG P G G+ VAVK L G Q + +K E+ ++ L H H+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 182 VRLFGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
++ GCC +QGE L + EY+P SL +L + +G + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHR+L A N+LLD+D KI DFG+A+
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ EYM N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG+ R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 131 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHL 181
LGEG FG P G G+ VAVK L G Q + +K E+ ++ L H H+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 182 VRLFGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
++ GCC +QGE L + EY+P SL +L + +G + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHR+L A N+LLD+D KI DFG+A+
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHL 181
+ + + K+G G FG V++ +G +VAVK L Q + + EF E+ ++ +L+H ++
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V G + ++ EY+ SL L + L + R+ + +A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARI 274
+ I+HRDLK+ N+L+D K+ DFG++R+
Sbjct: 157 NP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 73
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 129
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
+L+A+NIL+ ++ KI+DFG+AR+ +E
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNE 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 131 LGEGGFGPV--YKGRLLN---GQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRHLVRL 184
LGEG FG V Y N G+ VAVK L G L + ++ E+ ++ L H H+V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 185 FGCCIEQGENI--LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
GCC +QGE L+ EY+P SL +L + +G + + I +G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHR L A N+LLD+D KI DFG+A+
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 131 LGEGGFGPV--YKGRLLN---GQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRHLVRL 184
LGEG FG V Y N G+ VAVK L G L + ++ E+ ++ L H H+V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 185 FGCCIEQGENI--LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
GCC +QGE L+ EY+P SL +L + +G + + I +G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHR L A N+LLD+D KI DFG+A+
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I+I EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I+I EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V GRL + G+ VA+K L + + + +F +E ++ + H +++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + ++I EYM N SLD FL R Q V ++ GI G+ YL S +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQL-VGMLRGIGSGMKYL---SDMS 151
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+HRDL A NIL++S++ K+SDFGM+R+ D T R
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V GRL + G+ VA+K L + + + +F +E ++ + H +++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + ++I EYM N SLD FL K V ++ GI G+ YL S +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKYL---SDMS 130
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+HRDL A NIL++S++ K+SDFGM+R+ D T R
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V GRL + G+ VA+K L + + + +F +E ++ + H +++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + ++I EYM N SLD FL K V ++ GI G+ YL S +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKYL---SDMS 136
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+HRDL A NIL++S++ K+SDFGM+R+ D T R
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 131 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHL 181
LGEG FG P G G+ VAVK L +G Q + +K E+ ++ L H H+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 182 VRLFGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
++ GCC + G L + EY+P SL +L + +G + + I +G+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHRDL A N+LLD+D KI DFG+A+
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 72
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ E M N SLD FL K V ++ GIA G
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASG 130
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 131 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ E M N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 175 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 224
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL- 282
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLTE-----FKNEMMLIA 174
N S +G G FG V GRL L ++ VA+K L G TE F E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRRDFLGEASIMG 101
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQG 234
+ H +++RL G + +++ E M N SLD FL K V ++ GIA G
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ YL S + +HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 160 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHL 181
+ + + K+G G FG V++ +G +VAVK L Q + + EF E+ ++ +L+H ++
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V G + ++ EY+ SL L + L + R+ + +A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARI 274
+ I+HR+LK+ N+L+D K+ DFG++R+
Sbjct: 157 NP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 258 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 307
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 308 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL- 365
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 366 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 175 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 224
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL- 282
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 111 PLFSLASVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLT 164
P SLA A N+ LGEG FG V GQ+VA+K L+ QG
Sbjct: 2 PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
E E+ + L+H H+++L+ + E I++ EY N+ D + ++ ++ +AR
Sbjct: 61 E--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR 115
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
R + I + Y H R +I+HRDLK N+LLD +N KI+DFG++ I
Sbjct: 116 -RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 15/168 (8%)
Query: 117 SVSAATE------NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFK 167
S+++AT+ N+ Q +G+G F V R +L G+EVAVK + + + L +
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 168 NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI 227
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKF 120
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 121 RQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 111 PLFSLASVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLT 164
P SLA A N+ LGEG FG V GQ+VA+K L+ QG
Sbjct: 3 PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
E E+ + L+H H+++L+ + E I++ EY N+ D + ++ ++ +AR
Sbjct: 62 E--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
R + I + Y H R +I+HRDLK N+LLD +N KI+DFG++ I
Sbjct: 117 -RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQ---EVAVKRLS-NQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V GRL L G+ VA+K L + + +F E ++ + H +++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + +++ EYM N SLD FL K V ++ GI+ G+ YL S +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL---SDMG 144
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+HRDL A NIL++S++ K+SDFG++R+ D T R
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G G V+ G +VAVK L Q F E L+ +LQH+ LVRL+ +
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
Q +I EYM N SL FL P +L + + IA+G+ ++ + + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+A+NIL+ ++ KI+DFG+AR+ E
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 2 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 51
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 52 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL- 109
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 110 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 120 AATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLTEFKNEMMLI 173
A N+ LGEG FG V GQ+VA+K L+ QG E E+ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
L+H H+++L+ + E I++ EY N+ D + ++ ++ +AR R + I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR-RFFQQIIS 114
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E+ + KLG+G FG V+ G VA+K L + F E ++ KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 66
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L+ E+ I + EYM SL FL K L Q V + IA G+ Y+
Sbjct: 67 QLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE--- 121
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 120 AATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLTEFKNEMMLI 173
A N+ LGEG FG V GQ+VA+K L+ QG E E+ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 62
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
L+H H+++L+ + E I++ EY N+ D + ++ ++ +AR R + I
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR-RFFQQIIS 118
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 24/167 (14%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI--------IE 229
H ++V+L + + L++E++ S+D+ K+ + A I +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSYLF 113
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ QGL + H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 157
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 24/167 (14%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI--------IE 229
H ++V+L + + L++E++ S+D+ K+ + A I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSYLF 111
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ QGL + H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 175 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 224
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQL- 282
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG G FG V G+ L G +VAVK L+ Q + L + + E+ + +H H+++L+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ EY+ L F + K RL ++R R+ + I G+ Y H R +
Sbjct: 84 VISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESR-RLFQQILSGVDYCH---RHMV 137
Query: 247 IHRDLKASNILLDSDMNPKISDFGMARIFGGDEL 280
+HRDLK N+LLD+ MN KI+DFG++ + E
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 125 FSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLTEFKNEMMLIAKLQHRH 180
FS ++G G FG VY R + N + VA+K++S QS + + E+ + KL+H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
++ GC + + L+ EY + D+ + K + + A + G QGL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHS 133
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
++ +IHRD+KA NILL K+ DFG A I
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 174
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 125 FSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLTEFKNEMMLIAKLQHRH 180
FS ++G G FG VY R + N + VA+K++S QS + + E+ + KL+H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
++ GC + + L+ EY + D+ + K + + A + G QGL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHS 172
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
++ +IHRD+KA NILL K+ DFG A I
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 172
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 162
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 165
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS--NQSGQG 162
+KD+W E+ + KLG+G FG V+ G VA+K L N S +
Sbjct: 176 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA 226
Query: 163 LTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQ 222
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 227 ---FLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQ 282
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+ R+ +E
Sbjct: 283 L-VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 167
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 173
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 6 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 55
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 56 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQL- 113
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 156
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHRDL NIL++++ KI DFG+ ++ D+
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 106 KDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTE 165
KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 1 KDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEA 50
Query: 166 FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV 225
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q V
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-V 108
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+ IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 109 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 6 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 55
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 56 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQL- 113
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ S+D+ F L G + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 135
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 171
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 154
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E+ + KLG+G FG V+ G VA+K L + F E ++ KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 65
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L+ E+ I + EYM SL FL K L Q V + IA G+ Y+
Sbjct: 66 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVE--- 120
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ K++H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ S+D+ F L G + + + QGL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 131 LGEGGFGPVYKGRLL----NGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LGEG FG V +G L +VAVK +L N S + + EF +E + H +++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 185 FGCCIEQGEN-----ILIYEYMPNKSLDVFLFYPKKK---RLLGWQARVRIIEGIAQGLL 236
G CIE ++I +M L +L Y + + + + Q ++ + IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA-RIFGGD 278
YL S +HRDL A N +L DM ++DFG++ +I+ GD
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 120
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM SL FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKNEMMLIAKLQHRH 180
N+ +G+G F V R +L G+EVA+K + + + L + E+ ++ L H +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V+LF + LI EY +VF + R+ +AR + + I + Y HQ
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQ-IVSAVQYCHQ 132
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
RI+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 133 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKNEMMLIAKLQHRH 180
N+ +G+G F V R +L G+EVA+K + + + L + E+ ++ L H +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V+LF + LI EY +VF + R+ +AR + + I + Y HQ
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQ-IVSAVQYCHQ 129
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
RI+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 130 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQ 177
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGL 235
H ++V+L + + L++E++ ++ L F+ L G + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I++ EYM L FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+K RL ++ + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG V+KG + E V +K + ++SG Q + M+ I L H H+VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 185 FGCCIEQGENI-LIYEYMPNKSLDVFLFYPKKKR-LLGWQARVRIIEGIAQGLLYLHQYS 242
G C G ++ L+ +Y+P SL L + ++ R LG Q + IA+G+ YL ++
Sbjct: 99 LGLC--PGSSLQLVTQYLPLGSL---LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
++HR+L A N+LL S +++DFG+A + D+ Q
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 26/178 (14%)
Query: 130 KLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLV 182
+LGE FG VYKG L Q VA+K L +++ G EF++E ML A+LQH ++V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFY--PKK-----------KRLLGWQARVRIIE 229
L G + +I+ Y + L FL P K L V ++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD--ELQGNT 284
IA G+ YL S ++H+DL N+L+ +N KISD G+ R ++ D +L GN+
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G G V GRL + GQ VA+K L + + + +F +E ++ + H +++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G +++ EYM N SLD FL + + V ++ G+ G+ YL S L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
+HRDL A N+L+DS++ K+SDFG++R+ D T
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 26/178 (14%)
Query: 130 KLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLV 182
+LGE FG VYKG L Q VA+K L +++ G EF++E ML A+LQH ++V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFY--PKK-----------KRLLGWQARVRIIE 229
L G + +I+ Y + L FL P K L V ++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD--ELQGNT 284
IA G+ YL S ++H+DL N+L+ +N KISD G+ R ++ D +L GN+
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G G V GRL + GQ VA+K L + + + +F +E ++ + H +++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G +++ EYM N SLD FL + + V ++ G+ G+ YL S L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+HRDL A N+L+DS++ K+SDFG++R+ D
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI E++P SL +L K K + ++ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG V+KG + E V +K + ++SG Q + M+ I L H H+VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 185 FGCCIEQGENI-LIYEYMPNKSLDVFLFYPKKKR-LLGWQARVRIIEGIAQGLLYLHQYS 242
G C G ++ L+ +Y+P SL L + ++ R LG Q + IA+G+ YL ++
Sbjct: 81 LGLC--PGSSLQLVTQYLPLGSL---LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
++HR+L A N+LL S +++DFG+A + D+ Q
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 105 SKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT 164
+KD+W E+ + KLG+G FG V+ G VA+K L +
Sbjct: 9 AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
F E ++ KL+H LV+L+ E+ I + EYM L FL K L Q
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQL- 116
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
V + IA G+ Y+ R+ +HRDL+A+NIL+ ++ K++DFG+AR+ +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR--- 133
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 137
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 140
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 137
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 161
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 130
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 142
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 18/168 (10%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-------EFKNEM 170
+ A + ++G+GGFG V+KGRL+ + VA+K L +G T EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG 230
+++ L H ++V+L+G ++ E++P L L K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLD 130
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMN----PKISDFGMAR 273
IA G+ Y+ Q I+HRDL++ NI L S D N K++DFG+++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 146
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
G C G N+ LI EY+P SL +L K K + ++ I +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 132
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R IHR+L NIL++++ KI DFG+ ++ D+
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK 169
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAVK + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG G FG V G L G +VAVK L+ Q + L + K E+ + +H H+++L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ EY+ L F + K R+ +AR R+ + I + Y H R +
Sbjct: 79 VISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 247 IHRDLKASNILLDSDMNPKISDFGMARIFGGDEL 280
+HRDLK N+LLD+ MN KI+DFG++ + E
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAVK + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAVK + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG G FG V G L G +VAVK L+ Q + L + K E+ + +H H+++L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ EY+ L F + K R+ +AR R+ + I + Y H R +
Sbjct: 79 VISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 247 IHRDLKASNILLDSDMNPKISDFGMARIFGGDEL 280
+HRDLK N+LLD+ MN KI+DFG++ + E
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 27/160 (16%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTE----FKNEMMLIAKLQHRHLVRLFG 186
+G GGFG VY+ + G EVAVK + + +++ + E L A L+H +++ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKR-----LLGWQARVRIIEGIAQGLLYLHQY 241
C+++ L+ E+ L+ L KR L+ W + IA+G+ YLH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQ------IARGMNYLHDE 124
Query: 242 SRLRIIHRDLKASNILL-----DSDMNP---KISDFGMAR 273
+ + IIHRDLK+SNIL+ + D++ KI+DFG+AR
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 18/154 (11%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V +GRL G++ VA+K L + + EF +E ++ + +H +++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVR----IIEGIAQGLLYLHQY 241
G +++ E+M N +LD FL RL Q V ++ GIA G+ YL +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL------RLNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
S +HRDL A NIL++S++ K+SDFG++R
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 168
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LTEFKNEMMLIAKLQHR 179
E ++ C LG+G FG V K + + QE AVK ++ S + + E+ L+ KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 180 HLVRLFGCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
++++LF + ++ E Y + D + K+KR A RII+ + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDA-ARIIKQVFSGITYM 137
Query: 239 HQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTK 285
H+++ I+HRDLK NILL+S D + KI DFG++ F Q NTK
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LTEFKNEMMLIAKLQHR 179
E ++ C LG+G FG V K + + QE AVK ++ S + + E+ L+ KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 180 HLVRLFGCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
++++LF + ++ E Y + D + K+KR A RII+ + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDA-ARIIKQVFSGITYM 137
Query: 239 HQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTK 285
H+++ I+HRDLK NILL+S D + KI DFG++ F Q NTK
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LTEFKNEMMLIAKLQHR 179
E ++ C LG+G FG V K + + QE AVK ++ S + + E+ L+ KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 180 HLVRLFGCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
++++LF + ++ E Y + D + K+KR A RII+ + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDA-ARIIKQVFSGITYM 137
Query: 239 HQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTK 285
H+++ I+HRDLK NILL+S D + KI DFG++ F Q NTK
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 18/154 (11%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V +GRL G++ VA+K L + + EF +E ++ + +H +++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVR----IIEGIAQGLLYLHQY 241
G +++ E+M N +LD FL RL Q V ++ GIA G+ YL +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL------RLNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
S +HRDL A NIL++S++ K+SDFG++R
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 166
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLTEFK-NEMMLIAKLQHRH 180
E + K+GEG +G VYK + G+ VA+KR+ + +G+ E+ L+ +L H +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 181 LVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
+V L + L++E+M K LD K L Q ++ + + + +G+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLD-----ENKTGLQDSQIKIYLYQ-LLRGVAH 134
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
HQ+ RI+HRDLK N+L++SD K++DFG+AR FG
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+ RL ++ + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
ENF K+GEG +G VYK R L G+ VA+ RL ++ + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RIIEGIAQGLLY 237
++V+L + + L++E++ ++ L F+ L G + + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H + R++HRDLK N+L++++ K++DFG+AR FG
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLTEFK-NEMMLIAKLQHRH 180
E + K+GEG +G VYK + G+ VA+KR+ + +G+ E+ L+ +L H +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 181 LVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
+V L + L++E+M K LD K L Q ++ + + + +G+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLD-----ENKTGLQDSQIKIYLYQ-LLRGVAH 134
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
HQ+ RI+HRDLK N+L++SD K++DFG+AR FG
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 123 ENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
E F KLGEG +G VYK GQ VA+K++ +S L E E+ ++ + H+
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHV 86
Query: 182 VRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
V+ +G + + ++ EY S+ D+ + + L I++ +GL YLH
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLH- 142
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+R IHRD+KA NILL+++ + K++DFG+A
Sbjct: 143 --FMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 20/160 (12%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G+ VAVK+L + + + L +F+ E+ ++ LQH ++V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 185 FGCCIEQG-ENI-LIYEYMPNKSLDVFLFYPKKK----RLLGWQARVRIIEGIAQGLLYL 238
G C G N+ LI EY+P SL +L ++ +LL + ++ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
R IHRDL NIL++++ KI DFG+ ++ D
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-------EFKNEM 170
+ A + ++G+GGFG V+KGRL+ + VA+K L +G T EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG 230
+++ L H ++V+L+G ++ E++P L L K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLD 130
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMN----PKISDFGMAR 273
IA G+ Y+ Q I+HRDL++ NI L S D N K++DFG ++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAV+ + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAV+ + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ L H ++V+LF + L+ EY +VF + R+ +AR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L N S + E +E ++A + ++ RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKR-LLGWQARVRIIEGIAQGLLYLHQYSR 243
G C+ L+ + MP L L + ++ R LG Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCL---LDHVRENRGRLGSQDLLNWCMQIAKGMSYLED--- 137
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
+R++HRDL A N+L+ S + KI+DFG+AR+ DE +
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 140
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQ---GLTEFKNEMML--I 173
A + + ++GEG +G V+K R L G+ VA+KR+ Q+G+ L+ + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 174 AKLQHRHLVRLFGCCI-----EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
+H ++VRLF C + + L++E++ ++ L +L + + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ + +GL +LH + R++HRDLK NIL+ S K++DFG+ARI+
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQ---GLTEFKNEMML--I 173
A + + ++GEG +G V+K R L G+ VA+KR+ Q+G+ L+ + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 174 AKLQHRHLVRLFGCCI-----EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
+H ++VRLF C + + L++E++ ++ L +L + + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ + +GL +LH + R++HRDLK NIL+ S K++DFG+ARI+
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQ---GLTEFKNEMML--I 173
A + + ++GEG +G V+K R L G+ VA+KR+ Q+G+ L+ + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 174 AKLQHRHLVRLFGCCI-----EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
+H ++VRLF C + + L++E++ ++ L +L + + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ + +GL +LH + R++HRDLK NIL+ S K++DFG+ARI+
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
L G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
L G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
L G FG VYKG + E VA+K L S + E +E ++A + + H+ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V G L L G+ VA+K L S + + +F +E ++ + H +++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + ++I E+M N SLD FL + V ++ GIA G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+HRDL A NIL++S++ K+SDFG++R D
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-------EFKNEM 170
+ A + ++G+GGFG V+KGRL+ + VA+K L +G T EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG 230
+++ L H ++V+L+G ++ E++P L L K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLD 130
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMN----PKISDFGMAR 273
IA G+ Y+ Q I+HRDL++ NI L S D N K++DF +++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 102 KP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 155
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATV 180
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 78
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG G FG VYKG + E VA+ L S + E +E ++A + + H+ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C+ LI + MP L + + K +G Q + IA+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 170
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R++HRDL A N+L+ + + KI+DFG+A++ G +E
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 75
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 130
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPV-----YKGRLLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
LGEG FG V YK + Q+VA+K +S Q + E+ + L+H H++
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L+ + +++ EY + D + +KKR+ + R R + I + Y H
Sbjct: 73 KLYDVITTPTDIVMVIEYAGGELFDYIV---EKKRMTEDEGR-RFFQQIICAIEYCH--- 125
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
R +I+HRDLK N+LLD ++N KI+DFG++ I
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 31/171 (18%)
Query: 131 LGEGGFGPVYKGRL--LNGQ----EVAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
LGEG FG V K L G+ VAVK L N S L + +E ++ ++ H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKK---------------------KRLLGWQ 222
L+G C + G +LI EY SL FL +K +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ I+QG+ YL + ++++HRDL A NIL+ KISDFG++R
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 31/171 (18%)
Query: 131 LGEGGFGPVYKGRL--LNGQ----EVAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
LGEG FG V K L G+ VAVK L N S L + +E ++ ++ H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKK---------------------KRLLGWQ 222
L+G C + G +LI EY SL FL +K +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ I+QG+ YL + ++++HRDL A NIL+ KISDFG++R
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V+ G +VA+K L + F E ++ KL+H LV+L+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
E+ I + EYM SL FL + R L V + +A G+ Y+ R+ IHR
Sbjct: 75 EEPIYI-VTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL+++NIL+ + + KI+DFG+AR+ +E
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNE 159
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 95 -KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 148
Query: 250 DLKASNILLDSDMNPKISDFGMA 272
DLK++NI L D+ KI DFG+A
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 131 LGEGGFGPVYKGRL--LNGQ----EVAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
LGEG FG V K L G+ VAVK L N S L + +E ++ ++ H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKK---------------------KRLLGWQ 222
L+G C + G +LI EY SL FL +K +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ I+QG+ YL + S ++HRDL A NIL+ KISDFG++R
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 250 DLKASNILLDSDMNPKISDFGMA 272
DLK++NI L D+ KI DFG+A
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 75 AP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D+ KI DFG+A +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + + I A+G+ YLH S IIHR
Sbjct: 79 -KPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 250 DLKASNILLDSDMNPKISDFGMARI 274
DLK++NI L D KI DFG+A +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+F LG+G FG V K R L+ + A+K++ + + L+ +E+ML+A L H+++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 183 RLFGCCIEQGENI-------------LIYEYMPNKSLDVFLFYPK--KKRLLGWQARVRI 227
R + +E+ + + EY N++L + ++R W R+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I + L Y+H IIHRDLK NI +D N KI DFG+A+
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + I AQG+ YLH S IIHR
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMA 272
DLK++NI L D+ KI DFG+A
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 146
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 167
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 168
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 141
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 147
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 144
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKNEMMLIAKLQHRH 180
N+ +G+G F V R +L G+EVAVK + + + L + E+ ++ L H +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V+LF + L+ EY +VF + + +AR + + I + Y HQ
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGWMKEKEARAKFRQ-IVSAVQYCHQ 124
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
I+HRDLKA N+LLD+DMN KI+DFG + F
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 156
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V GRL L G+ VA+K L + + +F E ++ + H ++V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G +++ E+M N +LD FL K V ++ GIA G+ YL + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMG 165
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+HRDL A NIL++S++ K+SDFG++R+ D
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E + +LG G FG V G+ +VAVK + + EF E + KL H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+ +G C ++ ++ EY+ N L +L + L + + + +G+ +L +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESH- 123
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+ IHRDL A N L+D D+ K+SDFGM R D+
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ + ++ ++ SL L + K + + I A+G+ YLH S IIHR
Sbjct: 91 -KPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 250 DLKASNILLDSDMNPKISDFGMA 272
DLK++NI L D KI DFG+A
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 208
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + + EF E ++ L H LV+L+G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 74 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L++ K+SDFG++R DE +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 163
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + S EF E ++ L H LV+L+G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 81 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L++ K+SDFG++R DE +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + + EF E ++ L H LV+L+G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 70 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L++ K+SDFG++R DE +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + S EF E ++ L H LV+L+G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL A N L++ K+SDFG++R DE
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 117 SVSAATE-----NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLTEFKN 168
S ++A E N+ +G+G F V R +L G+EVAVK + + + L +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ + L H ++V+LF + L+ EY +VF + R +AR +
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAKFR 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ I + Y HQ I+HRDLKA N+LLD+D N KI+DFG + F
Sbjct: 121 Q-IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF 163
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + S EF E ++ L H LV+L+G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L++ K+SDFG++R DE +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 38/173 (21%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+F LG+G FG V K R L+ + A+K++ + + L+ +E+ML+A L H+++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 183 RLFGCCIEQG----------------------ENILIYEYMPNKSLDVFLFYPKKKRLLG 220
R + +E+ EN +Y+ + +++L+ ++R
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN-------QQRDEY 118
Query: 221 WQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
W R+ I + L Y+H IIHRDLK NI +D N KI DFG+A+
Sbjct: 119 W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
++G G FG VYKG+ V + ++ + Q L FKNE+ ++ K +H +++ G
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ ++ ++ SL L + K + + I A+G+ YLH S IIHR
Sbjct: 91 AP-QLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 250 DLKASNILLDSDMNPKISDFGMA 272
DLK++NI L D KI DFG+A
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E+ + KLG G FG V+ +VAVK + S + F E ++ LQH LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 73
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE---GIAQGLLYLH 239
+L ++ I I E+M SL FL + + Q ++I+ IA+G+ ++
Sbjct: 74 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMAFIE 128
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
Q + IHRDL+A+NIL+ + + KI+DFG+AR+ +E
Sbjct: 129 QRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + + EF E ++ L H LV+L+G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
DL A N L++ K+SDFG++R DE +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+LG G FG V G+ +VA+K + + EF E ++ L H LV+L+G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 190 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+Q +I EYM N L +L + + Q + + + + + + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 250 DLKASNILLDSDMNPKISDFGMARIFGGDE 279
DL A N L++ K+SDFG++R DE
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 147
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E+ + KLG G FG V+ +VAVK + S + F E ++ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 246
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE---GIAQGLLYLH 239
+L ++ I I E+M SL FL + + Q ++I+ IA+G+ ++
Sbjct: 247 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMAFIE 301
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
Q + IHRDL+A+NIL+ + + KI+DFG+AR+ +E
Sbjct: 302 QRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG VY G LL+ G+++ AVK L+ + G +++F E +++ H +++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 186 GCCI-EQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
G C+ +G +++ YM + L F+ P K L+G+ +V A+G+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 154
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 130 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
+LG+G FG VYK + G A K + +S + L ++ E+ ++A H ++V+L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
G+ ++ E+ P ++D + + L Q +V + + + L +LH RIIH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLHSK---RIIH 140
Query: 249 RDLKASNILLDSDMNPKISDFGMA 272
RDLKA N+L+ + + +++DFG++
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 16/167 (9%)
Query: 114 SLAS-VSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLTE-FKN 168
SLA+ + E+F LG+G F VY+ ++ G EVA+K + ++ G+ + +N
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW---QARV 225
E+ + +L+H ++ L+ + L+ E N ++ +L K R+ + +AR
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEAR- 115
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ I G+LYLH + I+HRDL SN+LL +MN KI+DFG+A
Sbjct: 116 HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 130 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
+LG+G FG VYK + G A K + +S + L ++ E+ ++A H ++V+L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
G+ ++ E+ P ++D + + L Q +V + + + L +LH RIIH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLHSK---RIIH 132
Query: 249 RDLKASNILLDSDMNPKISDFGMA 272
RDLKA N+L+ + + +++DFG++
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G FG V G L L G+ VA+K L S + + +F +E ++ + H +++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G + ++I E+M N SLD FL + + V ++ GIA G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 129
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+HR L A NIL++S++ K+SDFG++R D
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY G VAVK L + + + EF E ++ +++H +LV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + ++ EYMP +L +L ++ + + + I+ + YL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYL---E 147
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 25/170 (14%)
Query: 120 AATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKL 176
+++ F KLG G + VYKG G VA+K +L ++ G T + E+ L+ +L
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKEL 60
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQAR------VRI 227
+H ++VRL+ + + L++E+M N K +D R +G R V+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMD--------SRTVGNTPRGLELNLVKY 112
Query: 228 IEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ + QGL + H+ +I+HRDLK N+L++ K+ DFG+AR FG
Sbjct: 113 FQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 134 GGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE 193
G FG V+K +LLN + VAVK Q Q + E+ + ++H ++++ G ++G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGA-EKRGT 91
Query: 194 NI-----LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY------- 241
++ LI + SL FL K ++ W I E +A+GL YLH+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ I HRD+K+ N+LL +++ I+DFG+A F + G+T VGT
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGT 196
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 27/167 (16%)
Query: 128 QCKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLTEFKNEMMLIAKL-QHRHLV 182
Q +GEG FG V K R+ + A+KR+ S +F E+ ++ KL H +++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLL----------------GWQARVR 226
L G C +G L EY P+ +L FL +K R+L Q +
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL S+ + IHRDL A NIL+ + KI+DFG++R
Sbjct: 137 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 27/167 (16%)
Query: 128 QCKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLTEFKNEMMLIAKL-QHRHLV 182
Q +GEG FG V K R+ + A+KR+ S +F E+ ++ KL H +++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLL----------------GWQARVR 226
L G C +G L EY P+ +L FL +K R+L Q +
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL S+ + IHRDL A NIL+ + KI+DFG++R
Sbjct: 147 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 131 LGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRHLVR 183
+GEG FG V++ R LL + VAVK L ++ + +F+ E L+A+ + ++V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------LGWQARVR---------- 226
L G C L++EYM L+ FL + L +ARV
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 227 ----IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGDELQ 281
I +A G+ YL S + +HRDL N L+ +M KI+DFG++R I+ D +
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 282 GN 283
+
Sbjct: 232 AD 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E+ + KLG G FG V+ +VAVK + S + F E ++ LQH LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 240
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE---GIAQGLLYLH 239
+L ++ I I E+M SL FL + + Q ++I+ IA+G+ ++
Sbjct: 241 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMAFIE 295
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI 274
Q + IHRDL+A+NIL+ + + KI+DFG+AR+
Sbjct: 296 QRN---YIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLS----NQSGQGLTEFK-NEMMLIAKLQHRHLVRL 184
LGEG F VYK R N Q VA+K++ +++ G+ E+ L+ +L H +++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA-QGLLYLHQYSR 243
+ L++++M L+V + K L+ + ++ + QGL YLHQ+
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLEYLHQH-- 131
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGG 277
I+HRDLK +N+LLD + K++DFG+A+ FG
Sbjct: 132 -WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKN-- 168
+F S + ++ + Q LG+G FG V + + GQE AVK +S + + T+ ++
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 169 -EMMLIAKLQHRHLVRLFGCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVR 226
E+ L+ +L H ++++L+ ++G L+ E Y + D + +KR A R
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDA-AR 136
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGN 283
II + G+ Y+H + +I+HRDLK N+LL+S D N +I DFG++ F E
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 190
Query: 284 TKRIVGT 290
K +GT
Sbjct: 191 MKDKIGT 197
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKN-- 168
+F S + ++ + Q LG+G FG V + + GQE AVK +S + + T+ ++
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 169 -EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI 227
E+ L+ +L H ++++L+ ++G L+ E L F +KR A RI
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDA-ARI 154
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNT 284
I + G+ Y+H + +I+HRDLK N+LL+S D N +I DFG++ F E
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 208
Query: 285 KRIVGT 290
K +GT
Sbjct: 209 KDKIGT 214
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKN-- 168
+F S + ++ + Q LG+G FG V + + GQE AVK +S + + T+ ++
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 169 -EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI 227
E+ L+ +L H ++++L+ ++G L+ E L F +KR A RI
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDA-ARI 155
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNT 284
I + G+ Y+H + +I+HRDLK N+LL+S D N +I DFG++ F E
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 209
Query: 285 KRIVGT 290
K +GT
Sbjct: 210 KDKIGT 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 129 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
++G G FG VYKG+ V + ++ + + + F+NE+ ++ K +H +++ LF
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ + ++ ++ SL L + ++ + +Q + I AQG+ YLH + IIH
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHL-HVQETKFQMFQL-IDIARQTAQGMDYLHAKN---IIH 155
Query: 249 RDLKASNILLDSDMNPKISDFGMARI 274
RD+K++NI L + KI DFG+A +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKN-- 168
+F S + ++ + Q LG+G FG V + + GQE AVK +S + + T+ ++
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 169 -EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRI 227
E+ L+ +L H ++++L+ ++G L+ E L F +KR A RI
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDA-ARI 131
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNT 284
I + G+ Y+H+ +I+HRDLK N+LL+S D N +I DFG++ F E
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 185
Query: 285 KRIVGT 290
K +GT
Sbjct: 186 KDKIGT 191
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFG---- 186
+G G +G VYKG L + + VAVK S + Q KN + + ++H ++ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 187 -CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH------ 239
+ E +L+ EY PN SL +L W + R+ + +GL YLH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDEL 280
+ + I HRDL + N+L+ +D ISDFG++ G+ L
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+F LG+G FG V K R L+ + A+K++ + + L+ +E+ L+A L H+++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 183 RLFGCCIEQGENI-------------LIYEYMPNKSLDVFLFYPK--KKRLLGWQARVRI 227
R + +E+ + + EY N++L + ++R W R+
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I + L Y+H IIHR+LK NI +D N KI DFG+A+
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G FG VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 126
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 84 FYIFRRRRRKHKEKDGEGNDKSKDSWLPLFSLASV------SAATENFSTQCKLGEGGFG 137
Y+F R+R + +G + FS A V A E + +LG+G FG
Sbjct: 5 LYVFHRKRNNSRLGNGVLYASVNPEY---FSAADVYVPDEWEVAREKITMSRELGQGSFG 61
Query: 138 PVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
VY KG + + E VA+K ++ S + EF NE ++ + H+VRL G +
Sbjct: 62 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 121
Query: 191 QGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRIIE---GIAQGLLYLHQYSR 243
++I E M L +L P+ + +L + ++I+ IA G+ YL+
Sbjct: 122 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-- 179
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ +HRDL A N ++ D KI DFGM R
Sbjct: 180 -KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 27/167 (16%)
Query: 128 QCKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLTEFKNEMMLIAKL-QHRHLV 182
Q +GEG FG V K R+ + A+KR+ S +F E+ ++ KL H +++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLL----------------GWQARVR 226
L G C +G L EY P+ +L FL +K R+L Q +
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL S+ + IHR+L A NIL+ + KI+DFG++R
Sbjct: 144 FAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 131 LGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
LG+G +G VY GR L+ Q +A+K + + + E+ L L+H+++V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 190 EQGENILIYEYMPNKSLDVFL---FYPKK--KRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
E G + E +P SL L + P K ++ +G+ + I +GL YLH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 141
Query: 245 RIIHRDLKASNILLDSDMNP-KISDFGMARIFGGDELQGNTKRIVGT 290
+I+HRD+K N+L+++ KISDFG ++ G + T+ GT
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGT 186
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 23/166 (13%)
Query: 125 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRL---SNQSGQGLTEFKNEMMLIAKLQHRH 180
+ K+G+G FG V+K R GQ+VA+K++ + + G +T + E+ ++ L+H +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 78
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV----------RIIEG 230
+V L C + Y K+ +F + L G + V R+++
Sbjct: 79 VVNLIEICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ GL Y+H R +I+HRD+KA+N+L+ D K++DFG+AR F
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLTEFK-NEMMLIAKLQHRH 180
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 181 LVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
+V+L+ + +L++E++ K LDV + L A+ +++ + G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-----EGGLESVTAKSFLLQ-LLNGIAY 115
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H R++HRDLK N+L++ + KI+DFG+AR FG
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLTEFK-NEMMLIAKLQHRH 180
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 181 LVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
+V+L+ + +L++E++ K LDV + L A+ +++ + G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-----EGGLESVTAKSFLLQ-LLNGIAY 115
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H R++HRDLK N+L++ + KI+DFG+AR FG
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLTEFK-NEMMLIAKLQHRH 180
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 181 LVRLFGCCIEQGENILIYEYMPN---KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
+V+L+ + +L++E++ K LDV + L A+ +++ + G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-----EGGLESVTAKSFLLQ-LLNGIAY 115
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H R++HRDLK N+L++ + KI+DFG+AR FG
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 126
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
+ IHRDL A N L+ + K++DFG++R+ GD +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 133
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 126
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 25/176 (14%)
Query: 114 SLASVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRL---SNQSGQGLTEFKNE 169
S A + + + + KLGEG +G VYK + + VA+KR+ + G T + E
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-E 83
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE 229
+ L+ +LQHR+++ L LI+EY N D+ + K +R+I+
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNP-----DVSMRVIK 135
Query: 230 G----IAQGLLYLHQYSRLRIIHRDLKASNILL---DSDMNP--KISDFGMARIFG 276
+ G+ + H SR R +HRDLK N+LL D+ P KI DFG+AR FG
Sbjct: 136 SFLYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+KL H+++VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 192
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 116 ASVSAATENFSTQCK--------LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTE- 165
+ V TEN Q +GEG +G V K R + G+ VA+K+ + +
Sbjct: 10 SGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK 69
Query: 166 -FKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
E+ L+ +L+H +LV L C ++ L++E++ + LD +P L +Q
Sbjct: 70 IAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVV 126
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG 277
+ + I G+ + H ++ IIHRD+K NIL+ K+ DFG AR
Sbjct: 127 QKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 129 CKLGEGGFGPVYKGRLL-NGQEVAVKRL---SNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
K+G+G FG V+K R GQ+VA+K++ + + G +T + E+ ++ L+H ++V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV----------RIIEGIAQG 234
C + Y K +F + L G + V R+++ + G
Sbjct: 83 IEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
L Y+H R +I+HRD+KA+N+L+ D K++DFG+AR F
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 134 GGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE 193
G FG V+K +L+N VAVK Q Q + + E+ ++H +L++ F ++G
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSW-QSEREIFSTPGMKHENLLQ-FIAAEKRGS 82
Query: 194 NI-----LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY------- 241
N+ LI + SL +L K ++ W + E +++GL YLH+
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 242 -SRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ I HRD K+ N+LL SD+ ++DFG+A F + G+T VGT
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+KL H+++VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 123 ENFSTQCKLGEGGFGPVY--KGRLLNGQEVAVKRL---SNQSGQGLTEFKNEMMLIAKLQ 177
E + KLG GG VY + +LN + VA+K + + + L F+ E+ ++L
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H+++V + E L+ EY+ +L ++ + L + I G+ +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKH 126
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
H +RI+HRD+K NIL+DS+ KI DFG+A+ L T ++GT
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGT 175
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 131 LGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
LG+G +G VY GR L+ Q +A+K + + + E+ L L+H+++V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 190 EQGENILIYEYMPNKSLDVFL---FYPKK--KRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
E G + E +P SL L + P K ++ +G+ + I +GL YLH
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 127
Query: 245 RIIHRDLKASNILLDSDMNP-KISDFGMARIFGGDELQGNTKRIVGT 290
+I+HRD+K N+L+++ KISDFG ++ G + T+ GT
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGT 172
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
V+L+ C + + Y N L L Y +K I L YL
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGEL---LKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
H IIHRDLK NILL+ DM+ +I+DFG A++ + Q VGT
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 129
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 23/166 (13%)
Query: 125 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRL---SNQSGQGLTEFKNEMMLIAKLQHRH 180
+ K+G+G FG V+K R GQ+VA+K++ + + G +T + E+ ++ L+H +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 78
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV----------RIIEG 230
+V L C + Y K +F + L G + V R+++
Sbjct: 79 VVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ GL Y+H R +I+HRD+KA+N+L+ D K++DFG+AR F
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 133
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 129
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 133
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 23/166 (13%)
Query: 125 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRL---SNQSGQGLTEFKNEMMLIAKLQHRH 180
+ K+G+G FG V+K R GQ+VA+K++ + + G +T + E+ ++ L+H +
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 77
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV----------RIIEG 230
+V L C + Y K +F + L G + V R+++
Sbjct: 78 VVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ GL Y+H R +I+HRD+KA+N+L+ D K++DFG+AR F
Sbjct: 133 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 113 FSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKN--- 168
F S + ++ + Q LG+G FG V + + GQE AVK +S + + T+ ++
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ L+ +L H ++ +L+ ++G L+ E L F +KR A RII
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDA-ARII 132
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTK 285
+ G+ Y H + +I+HRDLK N+LL+S D N +I DFG++ F E K
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXK 186
Query: 286 RIVGT 290
+GT
Sbjct: 187 DKIGT 191
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 141
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 113 FSLASV------SAATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-S 159
FS A V A E + +LG+G FG VY KG + + E VA+K ++ S
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 160 GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR 217
+ EF NE ++ + H+VRL G + ++I E M L +L P+ +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 218 --LLGWQARVRIIE---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+L + ++I+ IA G+ YL+ + +HRDL A N ++ D KI DFGM
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 273 R 273
R
Sbjct: 180 R 180
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 132
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHRDL A N L+ + K++DFG++R+ GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G+G FG V G G +VAVK + N + F E ++ +L+H +LV+L G +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 191 Q-GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ G ++ EYM SL +L + + +LG ++ + + + YL + +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 250 DLKASNILLDSDMNPKISDFGMAR 273
DL A N+L+ D K+SDFG+ +
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G+G FG V G G +VAVK + N + F E ++ +L+H +LV+L G +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 191 Q-GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ G ++ EYM SL +L + + +LG ++ + + + YL + +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 250 DLKASNILLDSDMNPKISDFGMAR 273
DL A N+L+ D K+SDFG+ +
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 113 FSLASV------SAATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-S 159
FS A V A E + +LG+G FG VY KG + + E VA+K ++ S
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 160 GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR 217
+ EF NE ++ + H+VRL G + ++I E M L +L P+ +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 218 --LLGWQARVRIIE---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+L + ++I+ IA G+ YL+ + +HRDL A N ++ D KI DFGM
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 273 R 273
R
Sbjct: 180 R 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 113 FSLASV------SAATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-S 159
FS A V A E + +LG+G FG VY KG + + E VA+K ++ S
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 68
Query: 160 GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR 217
+ EF NE ++ + H+VRL G + ++I E M L +L P+ +
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 218 --LLGWQARVRIIE---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+L + ++I+ IA G+ YL+ + +HRDL A N ++ D KI DFGM
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 273 R 273
R
Sbjct: 186 R 186
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G+G FG V G G +VAVK + N + F E ++ +L+H +LV+L G +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 191 Q-GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ G ++ EYM SL +L + + +LG ++ + + + YL + +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 250 DLKASNILLDSDMNPKISDFGMAR 273
DL A N+L+ D K+SDFG+ +
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G+G FG V G G +VAVK + N + F E ++ +L+H +LV+L G +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 191 Q-GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHR 249
+ G ++ EYM SL +L + + +LG ++ + + + YL + +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 250 DLKASNILLDSDMNPKISDFGMAR 273
DL A N+L+ D K+SDFG+ +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRH 180
E F+ ++G+G FG VYKG + +EV ++ + ++ + + + E+ ++++ +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+ R FG ++ + +I EY+ S LD+ P ++ + I+ I +GL YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLH 133
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
R IHRD+KA+N+LL + K++DFG+A +++ N VGT
Sbjct: 134 SE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGT 179
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 133 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 158 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 191
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 199 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 165 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 198
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQ--SGQGLTEFKN 168
L V + F+ LG+G FG V + +L +VAVK L + + EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGEN------ILIYEYMPNKSLDVFLFYPK---KKRLL 219
E + + H H+ +L G + ++I +M + L FL + L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 220 GWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGD 278
Q VR + IA G+ YL S IHRDL A N +L DM ++DFG++R I+ GD
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 124 NFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSN---QSGQGLTEFKNEMMLIAKLQHR 179
NF + K+G G F VY+ LL+G VA+K++ + + E+ L+ +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFL-FYPKKKRLLG----WQARVRIIEGIAQG 234
++++ + IE E ++ E L + + K+KRL+ W+ V++ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
H +SR R++HRD+K +N+ + + K+ D G+ R F ++ +VGT
Sbjct: 151 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G VAVK+L + +F+ E+ ++ L +V+
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 185 FGCCIEQG--ENILIYEYMPNKSLDVFLFYPKKK----RLLGWQARVRIIEGIAQGLLYL 238
G G E L+ EY+P+ L FL + + RLL + ++ I +G+ YL
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 127
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
SR R +HRDL A NIL++S+ + KI+DFG+A++ D+
Sbjct: 128 G--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSN-QSGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 240 QYSRLRIIHRDLKASNILLDSDMN---PKISDFGMAR 273
+ IHRD+ A N LL KI DFGMAR
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 175 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 208
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HR+L A N ++ D KI DFGM R
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 130 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLV 182
+LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLG-----WQARVRIIEGIAQGL 235
RL G + +++ E M + L +L P+ + G Q +++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YL+ + +HR+L A N ++ D KI DFGM R
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMAR
Sbjct: 185 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR 218
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHR 179
E + KLGEG + VYKG+ L VA+K RL ++ G T + E+ L+ L+H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHA 60
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
++V L + L++EY+ +K L +L ++ + + +GL Y H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R +++HRDLK N+L++ K++DFG+AR
Sbjct: 118 ---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G VAVK+L + +F+ E+ ++ L +V+
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 185 FGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKK----RLLGWQARVRIIEGIAQGLLYL 238
G G L + EY+P+ L FL + + RLL + ++ I +G+ YL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 130
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R +HRDL A NIL++S+ + KI+DFG+A++ D+
Sbjct: 131 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 168
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G VAVK+L + +F+ E+ ++ L +V+
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 185 FGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKK----RLLGWQARVRIIEGIAQGLLYL 238
G G L + EY+P+ L FL + + RLL + ++ I +G+ YL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 131
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R +HRDL A NIL++S+ + KI+DFG+A++ D+
Sbjct: 132 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 335
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHR+L A N L+ + K++DFG++R+ GD
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 130 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
+LG+G FG V R G VAVK+L + +F+ E+ ++ L +V+
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 185 FGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKK----RLLGWQARVRIIEGIAQGLLYL 238
G G L + EY+P+ L FL + + RLL + ++ I +G+ YL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 143
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
R +HRDL A NIL++S+ + KI+DFG+A++ D+
Sbjct: 144 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 113 FSLASV------SAATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-S 159
FS A V A E + +LG+G FG VY KG + + E VA+K ++ S
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 68
Query: 160 GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPK--K 215
+ EF NE ++ + H+VRL G + ++I E M L +L P
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN 128
Query: 216 KRLLGWQARVRIIE---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+L + ++I+ IA G+ YL+ + +HRDL A N ++ D KI DFGM
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 273 R 273
R
Sbjct: 186 R 186
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 170
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 171 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPK--KKRLLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P +L + ++I
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N ++ D KI DFGM R
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 178
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 179 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L F P + L + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 180
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 181 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 332
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHR+L A N L+ + K++DFG++R+ GD
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 368
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 90 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 290 T 290
T
Sbjct: 195 T 195
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 124 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+ + + KLG G +G VY+G VAVK L + + + EF E ++ +++H +LV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+L G C + +I E+M +L +L ++ + + + I+ + YL
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 374
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+ IHR+L A N L+ + K++DFG++R+ GD
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 93 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 290 T 290
T
Sbjct: 198 T 198
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 67 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 114
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 290 T 290
T
Sbjct: 172 T 172
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 93 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 290 T 290
T
Sbjct: 198 T 198
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 74 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 121
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 290 T 290
T
Sbjct: 179 T 179
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 68 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 115
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 290 T 290
T
Sbjct: 173 T 173
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 120 AATENFSTQCKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQ-SGQGLTEFKNEMML 172
A E + +LG+G FG VY KG + + E VA+K ++ S + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKR--LLGWQARVRII 228
+ + H+VRL G + ++I E M L +L P+ + +L + ++I
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 229 E---GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ IA G+ YL+ + +HRDL A N + D KI DFGM R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 69 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 290 T 290
T
Sbjct: 174 T 174
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 70 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 290 T 290
T
Sbjct: 175 T 175
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 90 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 290 T 290
T
Sbjct: 195 T 195
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 90 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 290 T 290
T
Sbjct: 195 T 195
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 221
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 222 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 95 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 142
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 290 T 290
T
Sbjct: 200 T 200
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSN-QSGQGLTEFKNEMML--IA 174
AT + ++G G +G VYK R +G VA+K R+ N + G ++ + +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 175 KLQHRHLVRLFGCCIEQGEN-----ILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RI 227
+H ++VRL C + L++E++ ++ L +L K G A +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ +GL +LH I+HRDLK NIL+ S K++DFG+ARI+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCI 189
+G G +G VYKGR + ++A ++ + +G E K E+ ++ K HR++ +G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 190 EQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSR 243
++ L+ E+ S+ L K L + I I +GL +LHQ+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 148
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
++IHRD+K N+LL + K+ DFG++ D G +GT
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 192
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSN-QSGQGLTEFKNEMML--IA 174
AT + ++G G +G VYK R +G VA+K R+ N + G ++ + +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 175 KLQHRHLVRLFGCCIEQGEN-----ILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RI 227
+H ++VRL C + L++E++ ++ L +L K G A +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ +GL +LH I+HRDLK NIL+ S K++DFG+ARI+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSN-QSGQGLTEFKNEMML--IA 174
AT + ++G G +G VYK R +G VA+K R+ N + G ++ + +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 175 KLQHRHLVRLFGCCIEQGEN-----ILIYEYMPNKSLDVFLFYPKKKRLLGWQARV--RI 227
+H ++VRL C + L++E++ ++ L +L K G A +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
+ +GL +LH I+HRDLK NIL+ S K++DFG+ARI+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 147
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 148 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 130 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR----HLV 182
+LG G FG V +G R+ Q +VA+K L + + TE EMM A++ H+ ++V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIV 73
Query: 183 RLFGCCIEQGENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
RL G C Q E + L+ E L FL K+ + ++ ++ G+ YL +
Sbjct: 74 RLIGVC--QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+ +HRDL A N+LL + KISDFG+++ G D+
Sbjct: 130 N---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 150
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 151 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 131 LGEGGFGPVYKGRL------LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVR 183
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K H+++VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
G ++ ++ E M L FL P + L + + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 240 QYSRLRIIHRDLKASNILLDSDMNP----KISDFGMAR 273
+ IHRD+ A N LL P KI DFGMA+
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ 192
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 89 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 290 T 290
T
Sbjct: 194 T 194
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLTEFKNEMM 171
+ + E++ +G G +G K G++L +E+ ++ Q L +E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVN 57
Query: 172 LIAKLQHRHLVRLFGCCIEQGENIL--IYEYMPNKSL-DVFLFYPKKKRLLGWQARVRII 228
L+ +L+H ++VR + I++ L + EY L V K+++ L + +R++
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 229 EGIAQGLLYLHQYSR--LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ L H+ S ++HRDLK +N+ LD N K+ DFG+ARI DE K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKE 175
Query: 287 IVGT 290
VGT
Sbjct: 176 FVGT 179
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 161
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 162 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 155
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 156 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 130 KLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
+LG+G FG VYK + N + A K + +S + L ++ E+ ++A H ++V+L
Sbjct: 44 ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII-EGIAQGLLYLHQYSRLR 245
+ ++ E+ ++D + + +R L +++++++ + L YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML--ELERPLT-ESQIQVVCKQTLDALNYLHDN---K 155
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMA 272
IIHRDLKA NIL D + K++DFG++
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 89 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 290 T 290
T
Sbjct: 194 T 194
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 130 KLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
+LG+G FG VYK + N + A K + +S + L ++ E+ ++A H ++V+L
Sbjct: 44 ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII-EGIAQGLLYLHQYSRLR 245
+ ++ E+ ++D + + +R L +++++++ + L YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML--ELERPLT-ESQIQVVCKQTLDALNYLHDN---K 155
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMA 272
IIHRDLKA NIL D + K++DFG++
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 130 KLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
+LG+G FG VYK + N + A K + +S + L ++ E+ ++A H ++V+L
Sbjct: 44 ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII-EGIAQGLLYLHQYSRLR 245
+ ++ E+ ++D + + +R L +++++++ + L YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML--ELERPLT-ESQIQVVCKQTLDALNYLHDN---K 155
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMA 272
IIHRDLKA NIL D + K++DFG++
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 165 EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL---DVFLFYPKKKR--LL 219
+FKNE+ +I +++ + + G E +IYEYM N S+ D + F K +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 220 GWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
Q II+ + Y+H + I HRD+K SNIL+D + K+SDFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 280 LQG 282
++G
Sbjct: 207 IKG 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 143
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 144 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 146
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 147 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ QG FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ QG FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRLFGCC 188
+G G FG VY+ +L + G+ VA+K++ FKN E+ ++ KL H ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 189 IEQGENI------LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
GE L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL---F 185
+G G FG VY+ +L + G+ VA+K++ QG FKN E+ ++ KL H ++VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 186 GCCIEQGENI---LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
E+ + + L+ +Y+P V Y + K+ L + + + L Y+H +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 243 RLRIIHRDLKASNILLDSDMNP-KISDFGMAR 273
I HRD+K N+LLD D K+ DFG A+
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 131 LGEGGFGPV-YKGRLLNGQEVAVKRLS-NQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
+G GGF V +L G+ VA+K + N G L K E+ + L+H+H+ +L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ ++ EY P L F + + RL + RV + I + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGEL--FDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQG---YAH 131
Query: 249 RDLKASNILLDSDMNPKISDFGM 271
RDLK N+L D K+ DFG+
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGL 154
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + +VAVK L S+ + + L++ +EM ++ + +H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPK--KKRLLGWQARVRI 227
++ L G C + G +I EY +L +L + P + L + V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ D KI+DFG+AR
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 92 PFFVKLY------------FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA 139
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 290 T 290
T
Sbjct: 197 T 197
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH 178
E+F LGEG F R L +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-------- 230
V+L+ + + ++ L L Y K LL + ++ +
Sbjct: 90 PFFVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
I L YLH IIHRDLK NILL+ DM+ +I+DFG A++ + Q VG
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 290 T 290
T
Sbjct: 195 T 195
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 130 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR----HLV 182
+LG G FG V +G R+ Q +VA+K L + + TE EMM A++ H+ ++V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIV 399
Query: 183 RLFGCCIEQGENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
RL G C Q E + L+ E L FL K+ + ++ ++ G+ YL +
Sbjct: 400 RLIGVC--QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+ +HR+L A N+LL + KISDFG+++ G D+
Sbjct: 456 N---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 130 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRHLVRLFGC 187
++G G FG V+ GRL + VAVK L +F E ++ + H ++VRL G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 188 CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVR----IIEGIAQGLLYLHQYSR 243
C ++ ++ E + FL R G + RV+ ++ A G+ YL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFL------RTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHRDL A N L+ KISDFGM+R
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 131 LGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
LG+G FG K G+ + +K L + F E+ ++ L+H ++++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 190 EQGENILIYEYMPN-------KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+ I EY+ KS+D YP W RV + IA G+ YLH
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQ--YP-------WSQRVSFAKDIASGMAYLHS-- 126
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
+ IIHRDL + N L+ + N ++DFG+AR+ ++ Q
Sbjct: 127 -MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLTEFKNEMM 171
+ + E++ +G G +G K G++L +E+ ++ Q L +E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVN 57
Query: 172 LIAKLQHRHLVRLFGCCIEQGENIL--IYEYMPNKSL-DVFLFYPKKKRLLGWQARVRII 228
L+ +L+H ++VR + I++ L + EY L V K+++ L + +R++
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 229 EGIAQGLLYLHQYSR--LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ L H+ S ++HRDLK +N+ LD N K+ DFG+ARI D K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKT 175
Query: 287 IVGT 290
VGT
Sbjct: 176 FVGT 179
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 130 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRHLVRLFGC 187
++G G FG V+ GRL + VAVK L +F E ++ + H ++VRL G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 188 CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVR----IIEGIAQGLLYLHQYSR 243
C ++ ++ E + FL R G + RV+ ++ A G+ YL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFL------RTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IHRDL A N L+ KISDFGM+R
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLTE-FKNEMMLIAK 175
A E+ LGEG FG VY+G N + VAVK E F +E +++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L H H+V+L G IE+ +I E P L +L + K L V I + +
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 122
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGDELQGNTKRI 287
YL + +HRD+ NIL+ S K+ DFG++R I D + + R+
Sbjct: 123 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 172
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLTEFKNEMM 171
+ + E++ +G G +G K G++L +E+ ++ Q L +E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVN 57
Query: 172 LIAKLQHRHLVRLFGCCIEQGENIL--IYEYMPNKSL-DVFLFYPKKKRLLGWQARVRII 228
L+ +L+H ++VR + I++ L + EY L V K+++ L + +R++
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 229 EGIAQGLLYLHQYSR--LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKR 286
+ L H+ S ++HRDLK +N+ LD N K+ DFG+ARI D K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKA 175
Query: 287 IVGT 290
VGT
Sbjct: 176 FVGT 179
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLTE-FKNEMMLIAK 175
A E+ LGEG FG VY+G N + VAVK E F +E +++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L H H+V+L G IE+ +I E P L +L + K L V I + +
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 138
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGDELQGNTKRI 287
YL + +HRD+ NIL+ S K+ DFG++R I D + + R+
Sbjct: 139 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 188
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLTE-FKNEMMLIAK 175
A E+ LGEG FG VY+G N + VAVK E F +E +++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L H H+V+L G IE+ +I E P L +L + K L V I + +
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 126
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR-IFGGDELQGNTKRI 287
YL + +HRD+ NIL+ S K+ DFG++R I D + + R+
Sbjct: 127 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 114
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGL---TEFKNEMML 172
S AT + ++G G +G VYK R +G VA+K R+ N G G E+ L
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 173 IAKLQ---HRHLVRLFGCCIEQGEN-----ILIYEYMPNKSLDVFLFYPKKKRLLGWQAR 224
+ +L+ H ++VRL C + L++E++ ++ L +L K G A
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAE 120
Query: 225 V--RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
++ +GL +LH I+HRDLK NIL+ S K++DFG+ARI+
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 13/171 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRH 180
E F+ K+G+G FG V+KG Q+V ++ + ++ + + + E+ ++++ +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+ + +G ++ + +I EY+ S LD+ P + + I+ I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 121
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ IHRD+KA+N+LL K++DFG+A +++ NT VGT
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 167
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 130 KLGEGGFGPVYKGRLLNGQE-VAVKRLS-NQSGQGL-TEFKNEMMLIAKLQHRHLVRLFG 186
K+GEG +G V+K + E VA+KR+ + +G+ + E+ L+ +L+H+++VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ L++E+ D+ ++ L + + + +GL + H + +
Sbjct: 69 VLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 247 IHRDLKASNILLDSDMNPKISDFGMARIFG 276
+HRDLK N+L++ + K++DFG+AR FG
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFG 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT 284
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR + NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G G FG V K + ++VA+K++ ++S + F E+ ++++ H ++V+L+G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 191 QGENILIYEYMPNKSLDVFLF------YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
L+ EY SL L Y + W + +QG+ YLH
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 125
Query: 245 RIIHRDLKASNILLDSDMNP-KISDFGMA 272
+IHRDLK N+LL + KI DFG A
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
G++YLH + I HRD+K N+LLD N KISDFG+A +F + + ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 94/177 (53%), Gaps = 13/177 (7%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIA 174
+++ E F+ ++G+G FG V+KG Q+V ++ + ++ + + + E+ +++
Sbjct: 17 NIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 175 KLQHRHLVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
+ ++ + +G ++ + +I EY+ S LD+ P + + +++ I +
Sbjct: 77 QCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILK 131
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
GL YLH + IHRD+KA+N+LL + K++DFG+A +++ NT VGT
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 183
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 130 KLGEGGFGPVYKGRL--LNGQ--EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLV 182
KLG+G FG V +G +G+ VAVK L + + +F E+ + L HR+L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+G + ++ E P SL L + LLG +R + +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
R IHRDL A N+LL + KI DFG+ R
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRH 180
E F+ K+G+G FG V+KG Q+V ++ + ++ + + + E+ ++++ +
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+ + +G ++ + +I EY+ S LD+ P L I+ I +GL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 141
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ IHRD+KA+N+LL K++DFG+A +++ NT VGT
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 187
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L G C G ++I EY D+ F +K R+L I A LH S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 243 RL----------RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQGNTKRIV 288
++ IHRD+ A N+LL + KI DFG+AR D ++GN + V
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G G FG V K + ++VA+K++ ++S + F E+ ++++ H ++V+L+G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 191 QGENILIYEYMPNKSLDVFLF------YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
L+ EY SL L Y + W + +QG+ YLH
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 124
Query: 245 RIIHRDLKASNILLDSDMNP-KISDFGMA 272
+IHRDLK N+LL + KI DFG A
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV---RIIEG------- 230
++ L G C + G +I EY +L +L + +R G + R+ E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYL---RARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNE 169
L S A E+F LG+G FG VY R + +V K ++G + + E
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRRE 61
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE 229
+ + + L+H +++RL+G + LI EY P ++ L +K Q I
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYIT 118
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+A L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG------------ 230
L G C G ++I EY D+ F +K R+L I
Sbjct: 114 NLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 231 -IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQGNTKR 286
+AQG+ +L + IHRD+ A N+LL + KI DFG+AR D ++GN +
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 287 IV 288
V
Sbjct: 229 PV 230
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLL----NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLF 185
+G+G FG VY G + N + A+K LS + Q + F E +L+ L H +++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 186 GCCIE-QGENILIYEYMPNKSLDVFLFYPKK----KRLLGWQARVRIIEGIAQGLLYLHQ 240
G + +G ++ YM + L F+ P++ K L+ + +V A+G+ YL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQV------ARGMEYL-- 140
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ + +HRDL A N +LD K++DFG+AR
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 121 ATENFSTQCK---LGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL 176
A +F T K LG G FG V+K G ++A K + + + E KNE+ ++ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
H +L++L+ + + +L+ EY+ L F + L + ++ I +G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGEL--FDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 237 YLHQYSRLRIIHRDLKASNIL-LDSDMNP-KISDFGMAR 273
++HQ + I+H DLK NIL ++ D KI DFG+AR
Sbjct: 202 HMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 127 TQCK-LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKN-EMMLIAKLQHRHLVRL 184
T CK +G G FG V++ +L+ EVA+K++ FKN E+ ++ ++H ++V L
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-----RFKNRELQIMRIVKHPNVVDL 97
Query: 185 FGCCIEQGENI------LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
G+ L+ EY+P Y K K+ + + + + L Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNP-KISDFGMARIFGGDE 279
H + I HRD+K N+LLD K+ DFG A+I E
Sbjct: 158 HS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVRIIEGIAQ 233
L+H +++RL+G + LI EY P + Y + ++L + Q I +A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEV-----YKELQKLSKFDEQRTATYITELAN 124
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 114 SLASVSAATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKN 168
++ S A E+F LG+G FG VY R + +V K ++G + +
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 60
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ + + L+H +++RL+G + LI EY P ++ L +K Q I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYI 117
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+A L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLT-EFKNEMMLIAKL 176
A E+F LG+G FG VY R N + + A+K L + G+ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H ++IHRD+K N+LL S KI+DFG +
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVRIIEGIAQ 233
L+H +++RL+G + LI EY P + Y + ++L + Q I +A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEV-----YKELQKLSKFDEQRTATYITELAN 124
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 131 LGEGGFGPVYKGR--------LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
LG+G F ++KG L+ EV +K L F +++KL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+G C+ ENIL+ E++ SLD +L K K + ++ + + +A + +L + +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 243 RLRIIHRDLKASNILLDSDM-----NP---KISDFGMA-RIFGGDELQ 281
+IH ++ A NILL + NP K+SD G++ + D LQ
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK---NEMMLIAKL 176
+ ++F LG G FG V+ R NG+ A+K L + L + + +E ++++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
H ++R++G + + +I +Y+ L F K +R A+ E + L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAE-VCLALE 120
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YLH II+RDLK NILLD + + KI+DFG A+
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL-------FYPKKKRLLGWQARVRIIEGIAQGL 235
L G C G ++I EY L FL + R L + + +AQG+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQGNTKRIV 288
+L + IHRD+ A N+LL + KI DFG+AR D ++GN + V
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL-------FYPKKKRLLGWQARVRIIEGIAQGL 235
L G C G ++I EY L FL + R L + + +AQG+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQGNTKRIV 288
+L + IHRD+ A N+LL + KI DFG+AR D ++GN + V
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ 177
E+F LG+G FG VY R + +V K ++G + + E+ + + L+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++RL+G + LI EY P ++ L +K Q I +A L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSY 127
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
H R+IHRD+K N+LL S+ KI+DFG +
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 126
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Query: 130 KLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQ-HRHLVRLF 185
KLG+G +G V+K G+ VAVK++ + Q+ E+M++ +L H ++V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 186 GCCIEQGEN--ILIYEYMPNKSLDVF---LFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+ L+++YM V + P K+ + +Q +++I+ YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQL-IKVIK-------YLHS 127
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
++HRD+K SNILL+++ + K++DFG++R F
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ 177
E+F LG+G FG VY R + +V K ++G + + E+ + + L+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++RL+G + LI EY P ++ L +K Q I +A L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSY 127
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
H R+IHRD+K N+LL S+ KI+DFG +
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 65
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 122
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 65
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 122
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 68
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 125
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 159
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF Y+ ++ +EV ++ +S + E+ + L + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K + +AR + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 126
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 65
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 122
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 125 FSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR 183
+ K+GEG G V R + G++VAVK + + Q NE++++ QH ++V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 184 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSR 243
++ + E ++ E++ +L + + L + + E + Q L YLH
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 244 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+IHRD+K+ +ILL D K+SDFG D K +VGT
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGT 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 124
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF Y+ ++ +EV ++ +S + E+ + L + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K + +AR + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 66
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 123
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF Y+ ++ +EV ++ +S + E+ + L + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K + +AR + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 128 QCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
QC LG GGFG V++ + ++ A+KR+ + + E E+ +AKL+H +VR F
Sbjct: 11 QC-LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW-------QARVR-----IIEGIAQ 233
+E+ + P L + + +K+ L W + R R I IA+
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+ +LH ++HRDLK SNI D K+ DFG+ DE
Sbjct: 130 AVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 69
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 126
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 63
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 120
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 154
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHR 179
E++ LGEG G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSL------DVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G E L EY L D+ + P +R +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
G++YLH + I HRD+K N+LLD N KISDFG+A +F
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 121
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVRIIEGIAQ 233
L+H +++RL+G + LI EY P ++ Y + ++L + Q I +A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELAN 122
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVRIIEGIAQ 233
L+H +++RL+G + LI EY P ++ Y + ++L + Q I +A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELAN 122
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I EY +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + +I+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 81
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P L +K Q I +A L
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF Y+ ++ +EV ++ +S + E+ + L + H+V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K + +AR + + I QG+ YLH R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 90
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 147
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 90
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 147
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 61
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVRIIEGIAQ 233
L+H +++RL+G + LI EY P ++ Y + ++L + Q I +A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELAN 116
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 152
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 20/177 (11%)
Query: 116 ASVSAATENFSTQC------KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEF 166
+ V TEN Q +LG+G F V + ++L GQE A K ++ + S + +
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 167 KNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV- 225
+ E + L+H ++VRL E+G + LI++ + L F R +A
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADAS 124
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMARIFGGDE 279
I+ I + +L+ HQ + ++HRDLK N+LL S + K++DFG+A G++
Sbjct: 125 HCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRH 180
E F+ K+G+G FG V+KG Q+V ++ + ++ + + + E+ ++++ +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+ + +G ++ + +I EY+ S LD+ P + + I+ I +GL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 136
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ IHRD+KA+N+LL K++DFG+A +++ N VGT
Sbjct: 137 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGT 182
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + T +G G +G V + +G ++AVK+LS QS E+ L+
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 174 AKLQHRHLVRLF-----GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 160
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 161 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 130 KLGEGGFGPVYKGRLLNGQE-VAVKRLS-NQSGQGL-TEFKNEMMLIAKLQHRHLVRLFG 186
K+GEG +G V+K + E VA+KR+ + +G+ + E+ L+ +L+H+++VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ L++E+ D+ ++ L + + + +GL + H + +
Sbjct: 69 VLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 247 IHRDLKASNILLDSDMNPKISDFGMARIFG 276
+HRDLK N+L++ + K+++FG+AR FG
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 130 KLGEGGFGPVYKGRLLNGQ-EVAVKRLS-NQSGQG------------LTEFKNEMMLIAK 175
KLG G +G V + NG E A+K + +Q +G E NE+ L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L H ++++LF ++ L+ E+ L F + + A I++ I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDA-ANIMKQILSGI 159
Query: 236 LYLHQYSRLRIIHRDLKASNILLD---SDMNPKISDFGMARIFGGD 278
YLH+++ I+HRD+K NILL+ S +N KI DFG++ F D
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRH 180
E F+ K+G+G FG V+KG Q+V ++ + ++ + + + E+ ++++ +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+ + +G ++ + +I EY+ S LD+ P + + I+ I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 121
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ IHRD+KA+N+LL K++DFG+A +++ N VGT
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGT 167
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 131 LGE-GGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
+GE G FG VYK + N + A K + +S + L ++ E+ ++A H ++V+L
Sbjct: 17 IGELGDFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII-EGIAQGLLYLHQYSRLR 245
+ ++ E+ ++D + + +R L +++++++ + L YLH +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVML--ELERPLT-ESQIQVVCKQTLDALNYLHDN---K 128
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMA 272
IIHRDLKA NIL D + K++DFG++
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEM 170
L S+ SV + ++ K+G+G G VY + GQEVA+++++ Q NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIE 229
+++ + ++ ++V + E ++ EY+ SL DV + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCR 123
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
Q L +LH ++IHRD+K+ NILL D + K++DFG + Q +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVG 178
Query: 290 T 290
T
Sbjct: 179 T 179
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEM 170
L S+ SV + ++ K+G+G G VY + GQEVA+++++ Q NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIE 229
+++ + ++ ++V + E ++ EY+ SL DV + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCR 123
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVG 289
Q L +LH ++IHRD+K+ NILL D + K++DFG ++ + +T +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 178
Query: 290 T 290
T
Sbjct: 179 T 179
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 131 LGEGGFGPVYKGR--------LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
LG+G F ++KG L+ EV +K L F +++KL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
+G C ENIL+ E++ SLD +L K K + ++ + + +A + +L + +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 243 RLRIIHRDLKASNILLDSDM-----NP---KISDFGMA-RIFGGDELQ 281
+IH ++ A NILL + NP K+SD G++ + D LQ
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEM 170
L S+ SV + ++ K+G+G G VY + GQEVA+++++ Q NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIE 229
+++ + ++ ++V + E ++ EY+ SL DV + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCR 123
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
Q L +LH ++IHRD+K+ NILL D + K++DFG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ S+ K+ DFG++R
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 112 LFSLASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEM 170
L S+ SV + ++ K+G+G G VY + GQEVA+++++ Q NE+
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIE 229
+++ + ++ ++V + E ++ EY+ SL DV + + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCR 124
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
Q L +LH ++IHRD+K+ NILL D + K++DFG
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 162
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 116 ASVSAATENFSTQC--------KLGEGGFGPVY------KGRLLNGQEVAVKRLSNQSGQ 161
+ V TEN Q K+GEG FG GR +E+ + R+S++ +
Sbjct: 9 SGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE 68
Query: 162 GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW 221
E + E+ ++A ++H ++V+ E G ++ +Y + D+F +K +L
Sbjct: 69 ---ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC--EGGDLFKRINAQKGVLFQ 123
Query: 222 QARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
+ + I++ Q L L +I+HRD+K+ NI L D ++ DFG+AR+
Sbjct: 124 EDQ--ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR----------------VR 226
L G C G ++I EY L FL ++KR G + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL---RRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQGN 283
+AQG+ +L + IHRD+ A N+LL + KI DFG+AR D ++GN
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 284 TKRIV 288
+ V
Sbjct: 228 ARLPV 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I Y +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRH 180
+++ Q +G G V +E VA+KR++ + Q + E E+ +++ H +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKR----LLGWQARVRIIEGIAQGL 235
+V + + + E L+ + + S LD+ K +L I+ + +GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF--GGDELQGNTKR-IVGT 290
YLH+ + IHRD+KA NILL D + +I+DFG++ GGD + ++ VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G+G FG VY GR + + + + L FK E+M + +H ++V G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 191 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRD 250
+I ++L + K +L +I + I +G+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTL--YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 251 LKASNILLDSDMNPKISDFGMARIFG 276
LK+ N+ D+ I+DFG+ I G
Sbjct: 156 LKSKNVFYDNG-KVVITDFGLFSISG 180
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRH 180
+++ Q +G G V +E VA+KR++ + Q + E E+ +++ H +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 181 LVRLFGCCIEQGENILIYEYMPNKS-LDVFLFYPKKKR----LLGWQARVRIIEGIAQGL 235
+V + + + E L+ + + S LD+ K +L I+ + +GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF--GGDELQGNTKR-IVGT 290
YLH+ + IHRD+KA NILL D + +I+DFG++ GGD + ++ VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNG-QEVAVKRLSNQSGQGLTEFKN---EMMLIAKL 176
+N+ + +G G +G VY N + VA+K++ N+ + L + K E+ ++ +L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNRL 84
Query: 177 QHRHLVRLFGCCIEQG-----ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
+ +++RL I + E ++ E + +F K L Q I+ +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF----KTPIFLTEQHVKTILYNL 140
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
G ++H+ IIHRDLK +N LL+ D + KI DFG+AR D+
Sbjct: 141 LLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEV----AVKRLSN----QSGQGLTEFKNEMMLIA 174
ENF LG G +G V+ R ++G + A+K L Q + + E ++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 175 KL-QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
+ Q LV L + + LI +Y+ L F +++R + ++ + E I
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGE-IVL 170
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
L +LH +L II+RD+K NILLDS+ + ++DFG+++ F DE +
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 163 LTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL--IYEYMPNKSLDVFLFYPKKKRLLG 220
+ + E+ ++ KL H ++V+L + E+ L ++E + + + P K L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 221 WQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF-GGDE 279
QAR + + +G+ YLH +IIHRD+K SN+L+ D + KI+DFG++ F G D
Sbjct: 137 DQARFYF-QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 280 LQGNTKRIVGT 290
L NT VGT
Sbjct: 193 LLSNT---VGT 200
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 95 KEKDGEGNDKSKDSWL---PLFSLASVSAAT----------------ENFSTQCKLGEGG 135
KE+DGE + P + ASV+A + + +G G
Sbjct: 8 KEEDGEDGSAEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGA 67
Query: 136 FGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRL---FGCC 188
+G V R L GQ+VA+K++ N + +T K E+ ++ +H +++ +
Sbjct: 68 YGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT 126
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ GE +Y + D+ + L R + + + +GL Y+H ++IH
Sbjct: 127 VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHS---AQVIH 182
Query: 249 RDLKASNILLDSDMNPKISDFGMAR 273
RDLK SN+L++ + KI DFGMAR
Sbjct: 183 RDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 95 KEKDGEGNDKSKDSWL---PLFSLASVSAAT----------------ENFSTQCKLGEGG 135
KE+DGE + P + ASV+A + + +G G
Sbjct: 7 KEEDGEDGSAEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGA 66
Query: 136 FGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRL---FGCC 188
+G V R L GQ+VA+K++ N + +T K E+ ++ +H +++ +
Sbjct: 67 YGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT 125
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ GE +Y + D+ + L R + + + +GL Y+H ++IH
Sbjct: 126 VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHS---AQVIH 181
Query: 249 RDLKASNILLDSDMNPKISDFGMAR 273
RDLK SN+L++ + KI DFGMAR
Sbjct: 182 RDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 124
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI++FG +
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS 158
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ + K+ DFG++R
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK 175
A E+F LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 66
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
L+H +++RL+G + LI EY P ++ L +K Q I +A L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANAL 123
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
Y H R+IHRD+K N+LL S KI++FG +
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 145
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 146
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 147 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 184
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 137
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 138 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 175
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 181
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 131 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKL-QHRH 180
LGEG FG V K + VAVK L + + + L++ +EM ++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL-------------LGWQARVRI 227
++ L G C + G +I Y +L +L + + + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+G GGFG V+K + ++G+ ++R+ + + + E+ +AKL H ++V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWD 75
Query: 190 -------EQGENILIYEYMPNKS----------LDVFLFYPKKKRLLGWQARVR------ 226
+++ +Y P S L + + + K L W + R
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 227 -----IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ 281
+ E I +G+ Y+H ++IHRDLK SNI L KI DFG+ D
Sbjct: 136 VLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--- 189
Query: 282 GNTKRIVGT 290
G R GT
Sbjct: 190 GKRTRSKGT 198
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 141
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 142 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 191
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ Y+ ++ L+ K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDV----YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ Y+ ++ L+ K + L + I +GL Y+
Sbjct: 90 GINDIIRAPTIEQMKDV----YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSGQGLTEFKNEMM- 171
S A +F LG+G FG V+ R + +G A+K L + + + +M
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 172 -LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG 230
++A + H +V+L +G+ LI +++ + D+F K+ + + E
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE- 138
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A GL +LH L II+RDLK NILLD + + K++DFG+++
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 177
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 150
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 137
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIY 152
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
+ I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 153 Q-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 201
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 151
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG 201
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVA-----VKRLSNQSGQGLTEFKNEMMLIAK 175
TE + +LG+G F V + ++L GQE A K+LS + Q L + E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL---EREARICRL 66
Query: 176 LQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQG 234
L+H ++VRL E+G + LI++ + LF R +A I+ I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEA 122
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMARIFGGDE 279
+L+ HQ + ++HR+LK N+LL S + K++DFG+A G++
Sbjct: 123 VLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 181
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 181
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSN----QSGQGLTEFKNEMMLIAKLQ 177
+NF LG+G FG V R+ G AVK L Q + +L
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 178 HRHLVRLFGCCIEQGENIL-IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGL 235
H L +LF CC + + + + E++ L +F+ +K R +AR R I L
Sbjct: 83 HPFLTQLF-CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD-EARARFYAAEIISAL 137
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
++LH II+RDLK N+LLD + + K++DFGM +
Sbjct: 138 MFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 22/184 (11%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRL------SNQSGQGLTEFKNEMM 171
S +++ +LG G F V K R G+E A K + S++ G E + E+
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ +++H +++ L + + +LI E + L F F +K+ L +A + ++ I
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEA-TQFLKQI 117
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNI-LLDSDM-NPKIS--DFGMA-RIFGGDELQGNTKR 286
G+ YLH RI H DLK NI LLD ++ NP+I DFG+A +I G+E K
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 170
Query: 287 IVGT 290
I GT
Sbjct: 171 IFGT 174
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+GEG FG V++G ++ + VA+K N + + E F E + + + H H+V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
G I + +I E L FL +K L + + ++ L YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+HRD+ A N+L+ + K+ DFG++R
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 22/184 (11%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRL------SNQSGQGLTEFKNEMM 171
S +++ +LG G F V K R G+E A K + S++ G E + E+
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ +++H +++ L + + +LI E + L F F +K+ L +A + ++ I
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEA-TQFLKQI 138
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNI-LLDSDM-NPKIS--DFGMA-RIFGGDELQGNTKR 286
G+ YLH RI H DLK NI LLD ++ NP+I DFG+A +I G+E K
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 191
Query: 287 IVGT 290
I GT
Sbjct: 192 IFGT 195
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 138
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH 178
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 40/183 (21%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
+G GGFG V+K + ++G+ +KR+ + + + E+ +AKL H ++V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCW- 73
Query: 190 EQGENILIYEYMPNKS-----------LDVFLFYPKKKRLLGWQARVR-----------I 227
G ++Y P S L + + + K L W + R +
Sbjct: 74 -DG-----FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRI 287
E I +G+ Y+H ++I+RDLK SNI L KI DFG+ D G R
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRS 181
Query: 288 VGT 290
GT
Sbjct: 182 KGT 184
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 160
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 136
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 186
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 142
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K +L + +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCAKLTDDHVQF-LI 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 162
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 138
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 123 ENFSTQCKLGEGGFGPV-YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
E + K+GEG G V G++VAVK++ + Q NE++++ H ++
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + + L YLH
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQ 160
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL SD K+SDFG
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFG 186
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 489
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+GGF ++ + +EV ++ +S + E+ + L H+H+V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
+ ++ E +SL + ++K L +AR + I G YLH R R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 136
Query: 247 IHRDLKASNILLDSDMNPKISDFGMA 272
IHRDLK N+ L+ D+ KI DFG+A
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA+K++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KCQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V LN VA++++S Q + E+ ++ + +H +++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 112 LFSLASVSAATENFSTQC-------KLGEGGFGPVYKGR-LLNGQEVAVKRL-----SNQ 158
L S A +S +NF + +LG G +G V K R + +GQ +AVKR+ S +
Sbjct: 33 LDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE 92
Query: 159 SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPK---K 215
+ L + M + V +G +G+ + E M + SLD F Y + K
Sbjct: 93 QKRLLMDLDISMRTV---DCPFTVTFYGALFREGDVWICMELM-DTSLDKF--YKQVIDK 146
Query: 216 KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ + +I I + L +LH S+L +IHRD+K SN+L+++ K+ DFG++
Sbjct: 147 GQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 138
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 490
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ Y+ ++ L+ K + L + I +GL Y+
Sbjct: 93 GINDIIRAPTIEQMKDV----YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 149 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 186
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 136
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 186
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ Y+ ++ L+ K + L + I +GL Y+
Sbjct: 85 GINDIIRAPTIEQMKDV----YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 138
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 138
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 142
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 192
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 127
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQ-EVAVKRL--SNQSGQGLT-EFKNEMMLIAKLQH 178
++F LG+G FG VY R VA+K L S +G+ + + E+ + A L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+++RL+ ++ LI EY P L L +K Q I+E +A L+Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYC 139
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
H ++IHRD+K N+LL KI+DFG
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 145
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 128
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 179
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 125
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 128
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 178
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 137
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLF---- 185
LG GG G V+ + + VA+K++ Q + E+ +I +L H ++V++F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 186 ----------GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
G E ++ EYM +V ++ LL AR+ + + + +GL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARLFMYQ-LLRGL 133
Query: 236 LYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIF 275
Y+H + ++HRDLK +N+ +++ D+ KI DFG+ARI
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ + +H +++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ + ++ L L K + L + I +GL Y+
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLL----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 198
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 129
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 130 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 179
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 128
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 179
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 133
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 128
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 178
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 130 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSGQGL--TEFKNEMMLIAKLQHRHLVRL 184
+LG G FG V KG + VAVK L N++ E E ++ +L + ++VR+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G C E +L+ E L+ +L ++ R + + + ++ ++ G+ YL + +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 127
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
+HRDL A N+LL + KISDFG+++ DE
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 133
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 133
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG 183
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 142
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 192
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 143
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIY 151
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
+ I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 152 Q-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 200
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 22/173 (12%)
Query: 130 KLGEGGFGPVYKGRLL-NGQEVAVKRL------SNQSGQGLTEFKNEMMLIAKLQHRHLV 182
+LG G F V K R G+E A K + S++ G E + E+ ++ +++H +++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L + + +LI E + L F F +K+ L +A + ++ I G+ YLH
Sbjct: 79 TLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEA-TQFLKQILDGVHYLHSK- 134
Query: 243 RLRIIHRDLKASNI-LLDSDM-NPKIS--DFGMA-RIFGGDELQGNTKRIVGT 290
RI H DLK NI LLD ++ NP+I DFG+A +I G+E K I GT
Sbjct: 135 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KNIFGT 181
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 136
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 130
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 131 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 180
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 138
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 188
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIY 152
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
+ I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 153 Q-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 201
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 137
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG 187
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 133
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 143
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 143
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 137
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 137
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 154
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 204
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 136
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
T+ + +G+G F V + +L G E A K ++ + S + + + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+G + L+++ + L F R +A I+ I + +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMARIFGGDE 279
HQ + ++HRDLK N+LL S K++DFG+A GD+
Sbjct: 119 CHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + I
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIY 155
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
+ I +GL Y+H IIHRDLK SN+ ++ D KI DFG+AR DE+ G
Sbjct: 156 Q-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG 204
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ +H +++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DFG+ R DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG 181
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
++ +GEG +G V +N VA+K++S Q + E+ ++ +H +++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 183 ----RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ IEQ +++ I + + L L K + L + I +GL Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
H + ++HRDLK SN+LL++ + KI DFG+AR+ D
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH 180
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 131 LGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLTE-FKNEMMLIAKL-QHRHLV 182
LG G FG V + G+E VAVK L + + E +E+ +++ L QH ++V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFL-----------FYPKKK---------RLLGWQ 222
L G C G ++I EY L FL P + R L +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 223 ARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE--- 279
+ +AQG+ +L + IHRD+ A N+LL + KI DFG+AR D
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 280 LQGNTKRIV 288
++GN + V
Sbjct: 216 VKGNARLPV 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKR-LSNQSGQGLTEFK-NEMMLIAKLQHR 179
E + K+GEG +G V+K R + GQ VA+K+ L ++ + + E+ ++ +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
+LV L + L++EY + L Y +R + I Q + + H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH 119
Query: 240 QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG 277
+++ IHRD+K NIL+ K+ DFG AR+ G
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 130 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTE---FKNEMMLIAKLQHRHLVRLF 185
KLG G +G V + L G E A+K + S + +E+ ++ +L H ++++L+
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 186 GCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
++ L+ E Y + D + K + A V I++ + G YLH+++
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAV-IMKQVLSGTTYLHKHN-- 124
Query: 245 RIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTKRIVGT 290
I+HRDLK N+LL+S D KI DFG++ F E+ G K +GT
Sbjct: 125 -IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGT 169
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQ 177
+ T +LG G F V K R L + KR + S +G++ + + E+ ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
H +++ L + + ILI E + L F F +K+ L +A ++ I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMA-RIFGGDELQGNTKRIVGT 290
LH L+I H DLK NI+L P KI DFG+A +I G+E K I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 240
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQH 178
+E + KLG G +G V R + E A+K R ++ S ++ E+ ++ L H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 179 RHLVRLFGCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY 237
++++L+ ++ L+ E Y + D + K + A V II+ + G+ Y
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV---DAAV-IIKQVLSGVTY 151
Query: 238 LHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTKRIVGT 290
LH+++ I+HRDLK N+LL+S D KI DFG++ +F E Q K +GT
Sbjct: 152 LHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGT 201
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + + G+ VAVK++ + Q NE++++ QH ++
Sbjct: 34 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFG 172
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + + G+ VAVK++ + Q NE++++ QH ++
Sbjct: 23 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFG 161
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + + G+ VAVK++ + Q NE++++ QH ++
Sbjct: 154 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 266
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFG 292
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + +G+ VAVK++ + Q NE++++ QH ++
Sbjct: 27 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFG 165
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 130 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTE---FKNEMMLIAKLQHRHLVRLF 185
KLG G +G V + L G E A+K + S + +E+ ++ +L H ++++L+
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 186 GCCIEQGENILIYE-YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
++ L+ E Y + D + +++ A V I++ + G YLH+++
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAV-IMKQVLSGTTYLHKHN-- 141
Query: 245 RIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTKRIVGT 290
I+HRDLK N+LL+S D KI DFG++ F E+ G K +GT
Sbjct: 142 -IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGT 186
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRL-----SNQSGQGLTEFKNEM 170
S+ ++ +LG G +G V K R + +GQ +AVKR+ S + + L + M
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 171 MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPK---KKRLLGWQARVRI 227
+ V +G +G+ + E M + SLD F Y + K + + +I
Sbjct: 61 RTV---DCPFTVTFYGALFREGDVWICMELM-DTSLDKF--YKQVIDKGQTIPEDILGKI 114
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
I + L +LH S+L +IHRD+K SN+L+++ K+ DFG++
Sbjct: 115 AVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + + G+ VAVK++ + Q NE++++ QH ++
Sbjct: 32 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFG 170
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+NF K+GEG G V + + G+ VAVK++ + Q NE++++ QH ++
Sbjct: 77 DNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V ++ + E ++ E++ +L + + + + + + + Q L LH
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 189
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFG 270
+IHRD+K+ +ILL D K+SDFG
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFG 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI D+G+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG 181
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 130 KLGEGGFGPVY-KGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGC 187
KLG G FG V+ +G E +K ++ Q + + + E+ ++ L H +++++F
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 188 CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQAR---------VRIIEGIAQGLLYL 238
+ ++ E L +R++ QAR +++ + L Y
Sbjct: 89 FEDYHNMYIVMETCEGGEL--------LERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNP----KISDFGMARIFGGDELQGNT 284
H ++H+DLK NIL D +P KI DFG+A +F DE N
Sbjct: 141 HSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G +G V Y RL Q+VAVK+LS QS E+ L+ L+H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 186 -----GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
IE + + + L+ + K + L + ++ + +GL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV----KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IIHRDLK SN+ ++ D +I DFG+AR
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 114 SLASVSAATENFSTQC-----KLGEGGFGPVYKGRLLNG--------QEVAVKRLSNQSG 160
S SV+ E +C LG+GG+G V++ R + G +V K + ++
Sbjct: 3 SETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 161 QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLG 220
+ K E ++ +++H +V L G+ LI EY+ L F+ ++ +
Sbjct: 63 KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFME 120
Query: 221 WQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
A + E I+ L +LHQ II+RDLK NI+L+ + K++DFG+ +
Sbjct: 121 DTACFYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLI 173
+ SV + ++ K+G+G G VY + GQEVA+++++ Q NE++++
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA 232
+ ++ ++V + E ++ EY+ SL DV + + +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECL 127
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
Q L +LH ++IHR++K+ NILL D + K++DFG ++ + +T +VGT
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 121 ATENFS-----TQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQS-GQGL-TEFKNEMML 172
+ ENF+ T +LG G F V + GQE A K L + GQ E +E+ +
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 173 I--AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVF-LFYPKKKRLLGWQARVRIIE 229
+ AK R ++ L E ILI EY ++F L P+ ++ +R+I+
Sbjct: 82 LELAKSCPR-VINLHEVYENTSEIILILEYAAGG--EIFSLCLPELAEMVSENDVIRLIK 138
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM---NPKISDFGMARIFG 276
I +G+ YLHQ + I+H DLK NILL S + KI DFGM+R G
Sbjct: 139 QILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 114 SLASVSAATENFSTQC-----KLGEGGFGPVYKGRLLNG--------QEVAVKRLSNQSG 160
S SV+ E +C LG+GG+G V++ R + G +V K + ++
Sbjct: 3 SETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 161 QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLG 220
+ K E ++ +++H +V L G+ LI EY+ L F+ ++ +
Sbjct: 63 KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFME 120
Query: 221 WQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
A + E I+ L +LHQ II+RDLK NI+L+ + K++DFG+ +
Sbjct: 121 DTACFYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL---TEFKNEMMLIAKLQHRHLVRLFGC 187
+G+G +G V++G L +G+ VAVK S++ Q TE N ++L +H +++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 188 CI----EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH---- 239
+ + LI Y + SL FL +++ L +R+ A GL +LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 240 -QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF--GGDELQ-GNTKRI 287
+ I HRD K+ N+L+ S++ I+D G+A + G D L GN R+
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--------SGQGLTEFKNEMML 172
++ +ST LG G FG V+ +EV VK + + L + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA 232
+++++H +++++ QG L+ E LD+F F + RL + I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRL-----DEPLASYIF 136
Query: 233 QGLLYLHQYSRLR-IIHRDLKASNILLDSDMNPKISDFGMA 272
+ L+ Y RL+ IIHRD+K NI++ D K+ DFG A
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 87 FRRRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLN 146
F R+ + + +DK+ S + +S +S ++G GG V++
Sbjct: 25 FERQHMDSPDLGTDDDDKASSS-----ANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 147 GQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHRH--LVRLFGCCIEQGENILIYEYMP 202
Q A+K L Q L ++NE+ + KLQ ++RL+ I + IY M
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT---DQYIYMVME 136
Query: 203 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM 262
++D+ + KKK + W+ R + + + + +HQ+ I+H DLK +N L+ M
Sbjct: 137 CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM 192
Query: 263 NPKISDFGMARIFGGDELQGNTKRIV 288
K+ DFG+A +++Q +T +V
Sbjct: 193 -LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 87 FRRRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLN 146
F R+ + + +DK+ S + +S +S ++G GG V++
Sbjct: 25 FERQHMDSPDLGTDDDDKASSS-----ANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 147 GQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHRH--LVRLFGCCIEQGENILIYEYMP 202
Q A+K L Q L ++NE+ + KLQ ++RL+ I + IY M
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT---DQYIYMVME 136
Query: 203 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM 262
++D+ + KKK + W+ R + + + + +HQ+ I+H DLK +N L+ M
Sbjct: 137 CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM 192
Query: 263 NPKISDFGMARIFGGDELQGNTKRIV 288
K+ DFG+A +++Q +T +V
Sbjct: 193 -LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 87 FRRRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLN 146
F R+ + + +DK+ S + +S +S ++G GG V++
Sbjct: 25 FERQHMDSPDLGTDDDDKASSS-----ANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 147 GQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHRH--LVRLFGCCIEQGENILIYEYMP 202
Q A+K L Q L ++NE+ + KLQ ++RL+ I + IY M
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT---DQYIYMVME 136
Query: 203 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM 262
++D+ + KKK + W+ R + + + + +HQ+ I+H DLK +N L+ M
Sbjct: 137 CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM 192
Query: 263 NPKISDFGMARIFGGDELQGNTKRIV 288
K+ DFG+A +++Q +T +V
Sbjct: 193 -LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 120 AATENFSTQCKLGEGGFGPVYKGRLLNGQEV----AVKRLSNQSGQGLTEFKNEMM--LI 173
A F LG+G FG V+ + ++G + A+K L + + + +M ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++ H +V+L +G+ LI +++ + D+F K+ + + E +A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LAL 137
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L +LH L II+RDLK NILLD + + K++DFG+++
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 197
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-TEFKNEMMLIAKLQHRH 180
++F +LG G G V+K +G +A K + + + + E+ ++ + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
+V +G GE + E+M SLD L KK + Q ++ + +GL YL +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDELQGNTKRIVGT 290
+ +I+HRD+K SNIL++S K+ DFG MA F G + +R+ GT
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGT 181
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 125 FSTQCKLGEGGFGPVYKGRLLNGQEV--AVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
++ + +G G +G V K + G + A K++ + + FK E+ ++ L H +++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+ + + L+ E L + + KR+ RI++ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCH--- 123
Query: 243 RLRIIHRDLKASNILL--DSDMNP-KISDFGMARIF 275
+L + HRDLK N L DS +P K+ DFG+A F
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 125 FSTQCKLGEGGFGPVYKGRLLNGQEV--AVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
++ + +G G +G V K + G + A K++ + + FK E+ ++ L H +++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
RL+ + + L+ E L + + KR+ RI++ + + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCH--- 140
Query: 243 RLRIIHRDLKASNILL--DSDMNP-KISDFGMARIF 275
+L + HRDLK N L DS +P K+ DFG+A F
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 121 ATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
E+ ++G G +G V K +GQ +AVKR+ + + E K +M + +
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRS 77
Query: 180 ----HLVRLFGCCIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLGWQARVRIIEGIAQ 233
++V+ +G +G+ + E M + S D F Y ++ + +I +
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
L +L + L+IIHRD+K SNILLD N K+ DFG++
Sbjct: 137 ALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 34/177 (19%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL---TEFKNEMML---------IAKLQH 178
+G+G +G V++G G+ VAVK S++ + TE N +ML + +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
RH E +Y+Y+ +LD + +RI+ IA GL +L
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTV-------------SCLRIVLSIASGLAHL 150
Query: 239 H-----QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ---GNTKRI 287
H + I HRDLK+ NIL+ + I+D G+A + Q GN R+
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK---KRLLGWQARVRIIEG 230
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIA 174
S+S +S ++G GG V++ Q A+K L Q L ++NE+ +
Sbjct: 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN 81
Query: 175 KLQHRH--LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA 232
KLQ ++RL+ I IY M ++D+ + KKK + W+ R + +
Sbjct: 82 KLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNML 137
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
+ + +HQ+ I+H DLK +N L+ M K+ DFG+A +++Q +T +V
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI DF +AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG 181
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 120 AATENFSTQCKLGEGGFGPVYKGRLLNGQEV----AVKRLSNQSGQGLTEFKNEMM--LI 173
A F LG+G FG V+ + ++G + A+K L + + + +M ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++ H +V+L +G+ LI +++ + D+F K+ + + E +A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LAL 137
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L +LH L II+RDLK NILLD + + K++DFG+++
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 120 AATENFSTQCKLGEGGFGPVYKGRLLNGQEV----AVKRLSNQSGQGLTEFKNEMM--LI 173
A F LG+G FG V+ + ++G + A+K L + + + +M ++
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
++ H +V+L +G+ LI +++ + D+F K+ + + E +A
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LAL 138
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L +LH L II+RDLK NILLD + + K++DFG+++
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 34/177 (19%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL---TEFKNEMML---------IAKLQH 178
+G+G +G V++G G+ VAVK S++ + TE N +ML + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
RH E +Y+Y+ +LD + +RI+ IA GL +L
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTV-------------SCLRIVLSIASGLAHL 121
Query: 239 H-----QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ---GNTKRI 287
H + I HRDLK+ NIL+ + I+D G+A + Q GN R+
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 34/177 (19%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL---TEFKNEMML---------IAKLQH 178
+G+G +G V++G G+ VAVK S++ + TE N +ML + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
RH E +Y+Y+ +LD + +RI+ IA GL +L
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTV-------------SCLRIVLSIASGLAHL 121
Query: 239 H-----QYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQ---GNTKRI 287
H + I HRDLK+ NIL+ + I+D G+A + Q GN R+
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 131 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLVRLFGCC 188
LG+G V++GR G A+K +N S + + E ++ KL H+++V+LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 189 IEQG--ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
E +LI E+ P SL L P L + ++ + G+ +L + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---I 133
Query: 247 IHRDLKASNILL----DSDMNPKISDFGMARIFGGDE 279
+HR++K NI+ D K++DFG AR DE
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLTEFKN---EMMLIAKL 176
+N+ + +G G +G VY N ++ VA+K++ N+ + L + K E+ ++ +L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRL 82
Query: 177 QHRHLVRLFGCCIEQG-----ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
+ +++RL+ I E ++ E + +F K L + I+ +
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF----KTPIFLTEEHIKTILYNL 138
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE 279
G ++H+ IIHRDLK +N LL+ D + K+ DFG+AR ++
Sbjct: 139 LLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCC 188
LGEG + V L NG+E AVK + Q+G + E+ + + Q +++++ L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ L++E + S+ L + +K++ + R++ +A L +LH I H
Sbjct: 81 EDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 249 RDLKASNILLDSD--MNP-KISDFGM 271
RDLK NIL +S ++P KI DF +
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDL 160
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 123 ENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHR 179
+ + + +G G +G V +G++VA+K+LS QS E++L+ +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 180 HLVRLFGCCIEQGENILIYEY---MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA---- 232
+++ L Y++ MP D+ ++++G + I+ +
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL-------QKIMGMEFSEEKIQYLVYQML 154
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+GL Y+H ++HRDLK N+ ++ D KI DFG+AR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLTEFKNEM 170
AS S ++F +G G + V RL + +V K L N + + + E
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEK 71
Query: 171 MLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE 229
+ + H LV L C + + EY+ L +F+ +++R L +
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA 128
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I+ L YLH+ II+RDLK N+LLDS+ + K++D+GM +
Sbjct: 129 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 125 FSTQCKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAKLQHRH-- 180
+S ++G GG V++ Q A+K L Q L ++NE+ + KLQ
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
++RL+ I IY M ++D+ + KKK + W+ R + + + + +HQ
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 126
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
+ I+H DLK +N L+ M K+ DFG+A +++Q +T +V
Sbjct: 127 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 165
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 113 FSLASVSAATENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQ--SGQGLTEFKNE 169
F + + + ++N+ + +LG+G F V + G E A K ++ + S + + + E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--DVFL--FYPKKKRLLGWQARV 225
+ KLQH ++VRL E+ + L+++ + L D+ FY +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD-------AS 131
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMA 272
I+ I + + Y H I+HR+LK N+LL S K++DFG+A
Sbjct: 132 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLT-EFKNEMMLIAKL 176
++F LG+G FG VY R + + A+K L S +G+ + + E+ + + L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
+H +++R++ ++ L+ E+ P L L +K Q +E +A L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALH 128
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 212 YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM 271
Y +K L + +I+ + + + LH +L I+HRDLK NILLD DMN K++DFG
Sbjct: 101 YLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 272 A 272
+
Sbjct: 158 S 158
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 212 YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM 271
Y +K L + +I+ + + + LH +L I+HRDLK NILLD DMN K++DFG
Sbjct: 114 YLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 272 A 272
+
Sbjct: 171 S 171
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 94
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-----KRLLGWQARVRII 228
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+A+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLT-EFKNEMMLIAKL 176
++F LG+G FG VY R + + A+K L S +G+ + + E+ + + L
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
+H +++R++ ++ L+ E+ P L L +K Q +E +A L
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALH 129
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 212 YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM 271
Y +K L + +I+ + + + LH +L I+HRDLK NILLD DMN K++DFG
Sbjct: 114 YLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 272 A 272
+
Sbjct: 171 S 171
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAK 175
+S +S ++G GG V++ Q A+K L Q L ++NE+ + K
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 176 LQHRH--LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
LQ ++RL+ I IY M ++D+ + KKK + W+ R + + +
Sbjct: 67 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLE 122
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
+ +HQ+ I+H DLK +N L+ M K+ DFG+A +++Q +T +V
Sbjct: 123 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 168
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 113 FSLASVSAATENFSTQCK-LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSGQGL 163
+A E+ C+ +G+G F V R +N GQ+ AVK + ++ G
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 164 TEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQA 223
+ K E + L+H H+V L G +++E+M L F + +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFVYSE 129
Query: 224 RV--RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNP---KISDFGMARIFG 276
V + I + L Y H + IIHRD+K N+LL S N K+ DFG+A G
Sbjct: 130 AVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 131 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLVRLFGCC 188
LG+G V++GR G A+K +N S + + E ++ KL H+++V+LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 189 IEQG--ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI 246
E +LI E+ P SL L P L + ++ + G+ +L + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---I 133
Query: 247 IHRDLKASNILL----DSDMNPKISDFGMARIFGGDE 279
+HR++K NI+ D K++DFG AR DE
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 130 KLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
+LG G FG V++ G+ K ++ KNE+ ++ +L H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
++ E +LI E++ L F + + + + +GL ++H++S I+H
Sbjct: 118 EDKYEMVLILEFLSGGEL--FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 249 RDLKASNILLDSD--MNPKISDFGMARIFGGDEL 280
D+K NI+ ++ + KI DFG+A DE+
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F +G G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EYMP D+F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D K++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLT-EFKNEMMLIAKL 176
++F LG+G FG VY R + + A+K L S +G+ + + E+ + + L
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
+H +++R++ ++ L+ E+ P L L +K Q +E +A L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALH 128
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIAK 175
+S +S ++G GG V++ Q A+K L Q L ++NE+ + K
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 176 LQHRH--LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ 233
LQ ++RL+ I IY M ++D+ + KKK + W+ R + + +
Sbjct: 63 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLE 118
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
+ +HQ+ I+H DLK +N L+ M K+ DFG+A +++Q +T +V
Sbjct: 119 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 164
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G +G V Y RL Q+VAVK+LS QS E+ L+ L+H +++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 186 -----GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
IE + + + L+ + K + L + ++ + +GL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IIHRDLK SN+ ++ D +I DFG+AR
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLF 185
+G G +G V Y RL Q+VAVK+LS QS E+ L+ L+H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 186 -----GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
IE + + + L+ + K + L + ++ + +GL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IIHRDLK SN+ ++ D +I DFG+AR
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F +G G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EYMP D+F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D K++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLTEFKNEM 170
AS S ++F +G G + V RL + V K L N + + + E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEK 103
Query: 171 MLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE 229
+ + H LV L C + + EY+ D+ ++++L AR E
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFYSAE 161
Query: 230 GIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I+ L YLH+ II+RDLK N+LLDS+ + K++D+GM +
Sbjct: 162 -ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMM----L 172
+ E+F LG+G FG V+ Q A+K L + + M+ L
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 173 IAKLQHRHLVRLFGCCIEQGENIL-IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
+H L +F C + EN+ + EY+ L +++ + I
Sbjct: 73 SLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 128
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
GL +LH I++RDLK NILLD D + KI+DFGM +
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 123 ENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHR 179
+ + + +G G +G V +G++VA+K+LS QS E++L+ +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 180 HLVRLFGCCIEQGENILIYEY---MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA---- 232
+++ L Y++ MP D+ ++++G + I+ +
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL-------QKIMGLKFSEEKIQYLVYQML 136
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+GL Y+H ++HRDLK N+ ++ D KI DFG+AR
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLTEFKNEMMLIA 174
S+S +S ++G GG V++ Q A+K L Q L ++NE+ +
Sbjct: 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN 81
Query: 175 KLQHRH--LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA 232
KLQ ++RL+ I IY M ++D+ + KKK + W+ R + +
Sbjct: 82 KLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNML 137
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
+ + +HQ+ I+H DLK +N L+ M K+ DFG+A D VGT
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGT 191
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK---KRLLGWQARVRIIEG 230
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMM---LIAKLQHRHLVRLFG 186
LG GGFG V+ ++ G+ A K+L+ + + ++ M+ ++AK+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII--EGIAQGLLYLHQYSRL 244
E ++ + + N + Y + G+Q I I GL +LHQ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
II+RDLK N+LLD D N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE-FKNEMMLIAK 175
EN LG G FG V +VAVK L ++ E +E+ ++ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 176 L-QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFL------------FYPKKKRL---- 218
L H ++V L G C G LI+EY L +L Y +KRL
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 219 ----LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI 274
L ++ + +A+G+ +L S +HRDL A N+L+ KI DFG+AR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 275 FGGDE---LQGNTK 285
D ++GN +
Sbjct: 222 IMSDSNYVVRGNAR 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 149 EVAVKRLSNQSGQGLTE-FKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSL 206
EV +RLS + + + E + E ++ ++ H H++ L L+++ M +
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM--RKG 185
Query: 207 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI 266
++F + +K L + R I+ + + + +LH + I+HRDLK NILLD +M ++
Sbjct: 186 ELFDYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241
Query: 267 SDFGMA 272
SDFG +
Sbjct: 242 SDFGFS 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMM---LIAKLQHRHLVRLFG 186
LG GGFG V+ ++ G+ A K+L+ + + ++ M+ ++AK+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII--EGIAQGLLYLHQYSRL 244
E ++ + + N + Y + G+Q I I GL +LHQ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
II+RDLK N+LLD D N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI D G+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG 181
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI FG+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG 181
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMM---LIAKLQHRHLVRLFG 186
LG GGFG V+ ++ G+ A K+L+ + + ++ M+ ++AK+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII--EGIAQGLLYLHQYSRL 244
E ++ + + N + Y + G+Q I I GL +LHQ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
II+RDLK N+LLD D N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMM---LIAKLQHRHLVRLFG 186
LG GGFG V+ ++ G+ A K+L+ + + ++ M+ ++AK+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII--EGIAQGLLYLHQYSRL 244
E ++ + + N + Y + G+Q I I GL +LHQ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
II+RDLK N+LLD D N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
++N+ + +LG+G F V + G E A K ++ + S + + + E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+ + L+++ + LF R +A I+ I + + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMA 272
H I+HR+LK N+LL S K++DFG+A
Sbjct: 120 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMM----L 172
+ E+F LG+G FG V+ Q A+K L + + M+ L
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 173 IAKLQHRHLVRLFGCCIEQGENIL-IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
+H L +F C + EN+ + EY+ L +++ + I
Sbjct: 72 SLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 127
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
GL +LH I++RDLK NILLD D + KI+DFGM +
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
++N+ + +LG+G F V + G E A K ++ + S + + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+ + L+++ + LF R +A I+ I + + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMA 272
H I+HR+LK N+LL S K++DFG+A
Sbjct: 121 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 93
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK------KRLLGWQARVRI 227
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 228 IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+A+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI D G+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG 181
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
++N+ + +LG+G F V + G E A K ++ + S + + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+ + L+++ + LF R +A I+ I + + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMA 272
H I+HR+LK N+LL S K++DFG+A
Sbjct: 121 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+++ +LG G FG V++ G A K + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V L + E ++IYE+M L F + + V + + +GL ++H+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 242 SRLRIIHRDLKASNILLDSDMNP--KISDFGMA 272
+ +H DLK NI+ + + K+ DFG+
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+A+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLI 173
++ E + +G G +G V G VAVK+LS QS E+ L+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 174 AKLQHRHLVRLFGC-----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
++H +++ L +E+ ++ + ++ L+ + K ++L + +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LI 131
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQG 282
I +GL Y+H IIHRDLK SN+ ++ D KI D G+AR DE+ G
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG 181
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 123 ENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL 181
+++ +LG G FG V++ G A K + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
V L + E ++IYE+M L F + + V + + +GL ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 242 SRLRIIHRDLKASNILLDSDMNP--KISDFGMA 272
+ +H DLK NI+ + + K+ DFG+
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 121 ATENFSTQC-------KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMML 172
A ENF + +LG G +G V K R + +GQ AVKR+ ++ + ++
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVN---SQEQKRLLX 81
Query: 173 IAKLQHRHL-----VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPK---KKRLLGWQAR 224
+ R + V +G +G ++ I + + SLD FY + K + +
Sbjct: 82 DLDISXRTVDCPFTVTFYGALFREG-DVWICXELXDTSLD--KFYKQVIDKGQTIPEDIL 138
Query: 225 VRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+I I + L +LH S+L +IHRD+K SN+L+++ K DFG++
Sbjct: 139 GKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+A+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 129 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLVRLFGC 187
CK+G G +G VYK + +G++ L G G++ E+ L+ +L+H +++ L
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 188 CIEQGEN--ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQ 240
+ + L+++Y + + F+ K + V++ G+ + LLY +H
Sbjct: 87 FLSHADRKVWLLFDYAEHDLWHIIKFHRASK---ANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 241 YSRLRIIHRDLKASNILLDSDMNP-----KISDFGMARIFGG 277
++HRDLK +NIL+ + P KI+D G AR+F
Sbjct: 144 LHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNS 184
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+A+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMM 171
+A+ + T+++ +LG+G F V + + QE A K ++ + S + + + E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEG 230
+ L+H ++VRL E+G + L+++ + L F R +A I
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQ 138
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSD---MNPKISDFGMARIFGGDE 279
I + + ++HQ+ I+HRDLK N+LL S K++DFG+A G++
Sbjct: 139 ILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 130 KLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRH----LVRL 184
++G G G V+K R G +AVK++ + E K +M + + H +V+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQC 89
Query: 185 FGCCIEQGENILIYEYMPN--KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
FG I + + E M + L + P +R+LG ++ I + L YL +
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKE-- 142
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ +IHRD+K SNILLD K+ DFG++
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 120 AATENFSTQCKLGEGGFGPVYKGRLLNGQEV--AVKRLSNQSGQGLTEFKNEM----MLI 173
A +F +G+G FG V R +EV AVK L ++ E K+ M +L+
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 174 AKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IA 232
++H LV L + + +Y+ L FY ++ + R R IA
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAEIA 149
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L YLH L I++RDLK NILLDS + ++DFG+ +
Sbjct: 150 SALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENI-LIYEY 200
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ L+ E
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 201 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 260
M V +R+ ++ + G+ +LH IIHRDLK SNI++ S
Sbjct: 111 MDANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DXTLKILDFGLARTAG 177
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 129
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 190 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 94
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 131 LGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLTEFKNEM----MLIAKLQHRH 180
LG G FG V + + + VAVK L + G +E + M +LI H +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 181 LVRLFGCCIEQGENIL-IYEYMPNKSLDVFL------FYPKK-------KRLLGWQARVR 226
+V L G C + G ++ I E+ +L +L F P K K L + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 227 IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L E + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG+A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGT 201
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-EFKNEMMLIAKLQHRHLVRLFGCC 188
LG G F V Q+ VA+K ++ ++ +G +NE+ ++ K++H ++V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 189 IEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G LI + + L D + FY ++ R+I + + YLH L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-------SRLIFQVLDAVKYLHD---L 135
Query: 245 RIIHRDLKASNIL---LDSDMNPKISDFGMARI 274
I+HRDLK N+L LD D ISDFG++++
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV----RL 184
+GEG +G V + VA+K++S Q + E+ ++ + +H +++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
+E ++ I + + ++ L+ K + L + I +GL Y+H +
Sbjct: 111 RASTLEAMRDVYIVQDL----METDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMARI 274
++HRDLK SN+L+++ + KI DFG+ARI
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-EFKNEMMLIAKLQHRHLVRLFGCC 188
LG G F V Q+ VA+K ++ ++ +G +NE+ ++ K++H ++V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 189 IEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G LI + + L D + FY ++ R+I + + YLH L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-------SRLIFQVLDAVKYLHD---L 135
Query: 245 RIIHRDLKASNIL---LDSDMNPKISDFGMARI 274
I+HRDLK N+L LD D ISDFG++++
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-EFKNEMMLIAKLQHRHLVRLFGCC 188
LG G F V Q+ VA+K ++ ++ +G +NE+ ++ K++H ++V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 189 IEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G LI + + L D + FY ++ R+I + + YLH L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-------SRLIFQVLDAVKYLHD---L 135
Query: 245 RIIHRDLKASNIL---LDSDMNPKISDFGMARI 274
I+HRDLK N+L LD D ISDFG++++
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLTEFKNEMMLI 173
S ++F +G G + V RL + +V K L N + + + E +
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVF 59
Query: 174 AKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA 232
+ H LV L C + + EY+ L +F+ +++R L + I+
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEIS 116
Query: 233 QGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L YLH+ II+RDLK N+LLDS+ + K++D+GM +
Sbjct: 117 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCC 188
LGEG V L+ QE AVK + Q G + E+ ++ + Q HR+++ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
E+ L++E M S+ L + K+R +++ +A L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 249 RDLKASNILLD--SDMNP-KISDFGMARIFGGDELQGNTKRI 287
RDLK NIL + + ++P KI DFG+ G +L G+ I
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPI 173
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLT-EFKNEMMLIAKLQHRHLVRLFGCC 188
LG G F V Q+ VA+K ++ ++ +G +NE+ ++ K++H ++V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 189 IEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
G LI + + L D + FY ++ R+I + + YLH L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-------SRLIFQVLDAVKYLHD---L 135
Query: 245 RIIHRDLKASNIL---LDSDMNPKISDFGMARI 274
I+HRDLK N+L LD D ISDFG++++
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L + ++VAVK L + + F+ E A L H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 187 CCIEQGE----NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QGLLYL 238
+ ++ EY+ +L D+ G R IE IA Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFS 132
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGN----TKRIVGT 290
HQ IIHRD+K +NIL+ + K+ DFG+AR GN T ++GT
Sbjct: 133 HQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD---SGNSVXQTAAVIGT 182
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 131 LGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE---FKNEMMLIAKL-QHRH 180
LG G FG V + VAVK L + LTE +E+ +++ L H +
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG---------- 230
+V L G C G ++I EY L FL K+ + + I+E
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQ 281
+A+G+ +L + IHRDL A NILL KI DFG+AR D ++
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 282 GNTKRIV 288
GN + V
Sbjct: 205 GNARLPV 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 169 EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII 228
E+ ++ + ++V +G GE + E+M SLD L K+ + + + ++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGKVS 120
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG--------MARIFGGDEL 280
+ +GL YL + + +I+HRD+K SNIL++S K+ DFG MA F G
Sbjct: 121 IAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 281 QGNTKRIVGT 290
+R+ GT
Sbjct: 179 YMAPERLQGT 188
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
+G G +G V GR G +VA+K+L F++E L AK +R L RL
Sbjct: 33 VGSGAYGAVCSAVDGR--TGAKVAIKKLYRP-------FQSE--LFAKRAYREL-RLLKH 80
Query: 188 CIEQGENILIYEYMPNKSLDVF----LFYP---------KKKRLLGWQARVRIIEGIAQG 234
+ L+ + P+++LD F L P K LG ++ + +G
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
L Y+H IIHRDLK N+ ++ D KI DFG+AR
Sbjct: 141 LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENI-LIYEY 200
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ L+ E
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 201 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 260
M V +R+ ++ + G+ +LH IIHRDLK SNI++ S
Sbjct: 111 MDANLXQVIQMELDHERM------SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DXTLKILDFGLARTAG 177
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENI-LIYEY 200
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ L+ E
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 201 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 260
M V +R+ ++ + G+ +LH IIHRDLK SNI++ S
Sbjct: 111 MDANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DXTLKILDFGLARTAG 177
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 131 LGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE---FKNEMMLIAKL-QHRH 180
LG G FG V + VAVK L + LTE +E+ +++ L H +
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG---------- 230
+V L G C G ++I EY L FL K+ + + I+E
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQ 281
+A+G+ +L + IHRDL A NILL KI DFG+AR D ++
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 282 GNTKRIV 288
GN + V
Sbjct: 221 GNARLPV 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRL 184
+G G G V Y L + VA+K+LS + Q T K E++L+ + H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 185 FGC-----CIEQGENI-LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+E+ +++ L+ E M V +R+ ++ + G+ +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHL 142
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
H IIHRDLK SNI++ SD KI DFG+AR G
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENI-LIYEY 200
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ L+ E
Sbjct: 45 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 201 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 260
M V +R+ ++ + G+ +LH IIHRDLK SNI++ S
Sbjct: 104 MDANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKS 154
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 155 DXTLKILDFGLARTAG 170
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L + ++VAVK L + + F+ E A L H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 187 CCIEQGE----NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QGLLYL 238
+ ++ EY+ +L D+ G R IE IA Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFS 132
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGN----TKRIVGT 290
HQ IIHRD+K +NI++ + K+ DFG+AR GN T ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQTAAVIGT 182
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ 177
++F +G G + V RL + +V K L N + + + E + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQAS 67
Query: 178 -HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLL 236
H LV L C + + EY+ L +F+ +++R L + I+ L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 237 YLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
YLH+ II+RDLK N+LLDS+ + K++D+GM +
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 131 LGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE---FKNEMMLIAKL-QHRH 180
LG G FG V + VAVK L + LTE +E+ +++ L H +
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG---------- 230
+V L G C G ++I EY L FL K+ + + I+E
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQ 281
+A+G+ +L + IHRDL A NILL KI DFG+AR D ++
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 282 GNTKRIV 288
GN + V
Sbjct: 223 GNARLPV 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L E + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D +++DFG+A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGT 201
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 126 STQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLVR 183
+ Q +LG G FG V++ G + AVK++ L F+ E+M A L +V
Sbjct: 77 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVP 130
Query: 184 LFGCCIEQGENILIY-EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L+G + +G + I+ E + SL + K++ L + + +GL YLH S
Sbjct: 131 LYGA-VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--S 184
Query: 243 RLRIIHRDLKASNILLDSD-MNPKISDFGMARIFGGDEL 280
R RI+H D+KA N+LL SD + + DFG A D L
Sbjct: 185 R-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 126 STQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLVR 183
+ Q +LG G FG V++ G + AVK++ L F+ E+M A L +V
Sbjct: 96 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVP 149
Query: 184 LFGCCIEQGENILIY-EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L+G + +G + I+ E + SL + K++ L + + +GL YLH S
Sbjct: 150 LYGA-VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--S 203
Query: 243 RLRIIHRDLKASNILLDSD-MNPKISDFGMARIFGGDEL 280
R RI+H D+KA N+LL SD + + DFG A D L
Sbjct: 204 R-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 131 LGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE---FKNEMMLIAKL-QHRH 180
LG G FG V + VAVK L + LTE +E+ +++ L H +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG---------- 230
+V L G C G ++I EY L FL K+ + + I+E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQ 281
+A+G+ +L + IHRDL A NILL KI DFG+AR D ++
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 282 GNTKRIV 288
GN + V
Sbjct: 228 GNARLPV 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L + ++VAVK L + + F+ E A L H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 187 CCIEQGE----NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QGLLYL 238
+ ++ EY+ +L D+ G R IE IA Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFS 132
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGN----TKRIVGT 290
HQ IIHRD+K +NI++ + K+ DFG+AR GN T ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQTAAVIGT 182
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
T+ + +LG+G F V + ++ GQE A K ++ + S + + + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+G + L+++ + L F R +A I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMARIFGGDE 279
H I+HRDLK N+LL S K++DFG+A GD+
Sbjct: 119 CHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 131 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCC 188
L EGGF VY+ + + +G+E A+KRL + + E+ + KL H ++V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 189 --------IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
Q E +L+ E + ++ FL + + L ++I + + ++H+
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 241 YSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ IIHRDLK N+LL + K+ DFG A
Sbjct: 155 -QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 131 LGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLTE---FKNEMMLIAKL-QHRH 180
LG G FG V + VAVK L + LTE +E+ +++ L H +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 181 LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG---------- 230
+V L G C G ++I EY L FL K+ + + I+E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 231 ------IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE---LQ 281
+A+G+ +L + IHRDL A NILL KI DFG+AR D ++
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 282 GNTKRIV 288
GN + V
Sbjct: 228 GNARLPV 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 131 LGEGGFGPV---YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
+G G G V Y L + VA+K+LS F+N+ AK +R LV L C
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSR-------PFQNQTH--AKRAYRELV-LMKC 117
Query: 188 CIEQGENILIYEYMPNKSL----DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----L 238
+ L+ + P K+L DV+L L ++ + LLY +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG 276
IIHRDLK SNI++ SD KI DFG+AR G
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F +G G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D K++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFXEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 130 KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
++G G F VYKG EVA L ++ + FK E + LQH ++VR +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 187 C---------CIEQGENILIYEYMPNKSLDVFL--FYPKKKRLLGWQARVRIIEGIAQGL 235
CI +L+ E + +L +L F K ++L R I +GL
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QILKGL 142
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARI 274
+LH + IIHRDLK NI + + KI D G+A +
Sbjct: 143 QFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENILIYEYM 201
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ I +
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 202 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD 261
+ +L + + L + ++ + G+ +LH IIHRDLK SNI++ SD
Sbjct: 111 MDANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 262 MNPKISDFGMARIFG 276
KI DFG+AR G
Sbjct: 163 ATLKILDFGLARTAG 177
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DATLKILDFGLARTAG 177
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQH 178
T+ + +LG+G F V + ++ GQE A K ++ + S + + + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARV-RIIEGIAQGLLY 237
++VRL E+G + L+++ + L F R +A I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 238 LHQYSRLRIIHRDLKASNILLDSD---MNPKISDFGMARIFGGDE 279
H I+HRDLK N+LL S K++DFG+A GD+
Sbjct: 119 CHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENILIYEYM 201
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ I +
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 202 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD 261
+ +L + + L + ++ + G+ +LH IIHRDLK SNI++ SD
Sbjct: 111 MDANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 262 MNPKISDFGMARIFG 276
KI DFG+AR G
Sbjct: 163 ATLKILDFGLARTAG 177
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 117 SVSAATENFST-----QCK-LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN- 168
SV A F+ Q K +G G G V + G VAVK+LS + Q T K
Sbjct: 12 SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRA 70
Query: 169 --EMMLIAKLQHRHLVRLFGC-----CIEQGENI-LIYEYMPNKSLDVFLFYPKKKRLLG 220
E++L+ + H++++ L +E+ +++ L+ E M V +R+
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM-- 128
Query: 221 WQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
++ + G+ +LH IIHRDLK SNI++ SD KI DFG+AR
Sbjct: 129 ----SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 20 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 136
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 137 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 187
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 202
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGC-----CIEQGENILIYEYM 201
VA+K+LS + Q T K E++L+ + H++++ L +E+ +++ I +
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 202 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD 261
+ +L + + L + ++ + G+ +LH IIHRDLK SNI++ SD
Sbjct: 111 MDANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 262 MNPKISDFGMARIFG 276
KI DFG+AR G
Sbjct: 163 ATLKILDFGLARTAG 177
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLS--NQSGQGLTEFKNEMMLIA 174
V + +F + LGEG +G V G+ VA+K++ ++ L + E+ ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 175 KLQHRHLVRLFGC----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQ--ARVRII 228
+H +++ +F E + I + + L R++ Q + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL---------HRVISTQMLSDDHIQ 115
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
I Q L + +IHRDLK SN+L++S+ + K+ DFG+ARI DE +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPT 173
Query: 289 G 289
G
Sbjct: 174 G 174
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L ++VAVK L + + F+ E A L H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 187 CCIEQGE----NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QGLLYL 238
+ ++ EY+ +L D+ G R IE IA Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFS 132
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG--GDELQGNTKRIVGT 290
HQ IIHRD+K +NI++ + K+ DFG+AR G+ + T ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT-QTAAVIGT 182
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 90 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 139
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 200 DCTLKILDFGLARTAG 215
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLS--NQSGQGLTEFKNEMMLIA 174
V + +F + LGEG +G V G+ VA+K++ ++ L + E+ ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 175 KLQHRHLVRLFGC----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQ--ARVRII 228
+H +++ +F E + I + + L R++ Q + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL---------HRVISTQMLSDDHIQ 115
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
I Q L + +IHRDLK SN+L++S+ + K+ DFG+ARI DE +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPT 173
Query: 289 G 289
G
Sbjct: 174 G 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 118 VSAATENFSTQCKLGEGGFGPVYKG-RLLNGQEVAVKRLS--NQSGQGLTEFKNEMMLIA 174
V + +F + LGEG +G V G+ VA+K++ ++ L + E+ ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 175 KLQHRHLVRLFGC----CIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQ--ARVRII 228
+H +++ +F E + I + + L R++ Q + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL---------HRVISTQMLSDDHIQ 115
Query: 229 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIV 288
I Q L + +IHRDLK SN+L++S+ + K+ DFG+ARI DE +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPT 173
Query: 289 G 289
G
Sbjct: 174 G 174
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 110 LPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNE 169
LPL +++ Q +G+G FG V++G+ G+EVAVK S++ + + E
Sbjct: 19 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 73
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQA 223
+ L+H +++ + +N L+ +Y + SL +L + + +
Sbjct: 74 IYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEG 127
Query: 224 RVRIIEGIAQGLLYLH-----QYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+++ A GL +LH + I HRDLK+ NIL+ + I+D G+A
Sbjct: 128 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 110 LPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNE 169
LPL +++ Q +G+G FG V++G+ G+EVAVK S++ + + E
Sbjct: 32 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 86
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQA 223
+ L+H +++ + +N L+ +Y + SL +L + + +
Sbjct: 87 IYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEG 140
Query: 224 RVRIIEGIAQGLLYLHQ-----YSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+++ A GL +LH + I HRDLK+ NIL+ + I+D G+A
Sbjct: 141 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 150 VAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL 206
VA+K+LS + Q T K E++L+ + H++++ L + P KSL
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSL 98
Query: 207 ----DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNIL 257
DV++ L ++ + LLY + IIHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 258 LDSDMNPKISDFGMARIFG 276
+ SD KI DFG+AR G
Sbjct: 159 VKSDATLKILDFGLARTAG 177
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 125 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLV 182
F + LG G F V G+ AVK + ++ +G + +NE+ ++ K++H ++V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 183 RLFGCCIEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYL 238
L L+ + + L D + FY +K +I + + YL
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA-------STLIRQVLDAVYYL 136
Query: 239 HQYSRLRIIHRDLKASNILL---DSDMNPKISDFGMARIFG-GD 278
H R+ I+HRDLK N+L D + ISDFG++++ G GD
Sbjct: 137 H---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKL- 176
T F K+G G FG V+K + L+G A+KR S + G + +N E+ A L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVR-IIEGIAQ 233
QH H+VR F E ++ EY SL + + R++ + +A ++ ++ + +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGR 126
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNP 264
GL Y+H S ++H D+K SNI + P
Sbjct: 127 GLRYIHSMS---LVHMDIKPSNIFISRTSIP 154
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 117 SVSAATENFST-----QCK-LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNE 169
SV A F+ Q K +G G G V + G VAVK+LS F+N+
Sbjct: 10 SVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-------PFQNQ 62
Query: 170 MMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL----DVFLFYPKKKRLLGWQARV 225
AK +R LV L C + L+ + P K+L DV+L L +
Sbjct: 63 TH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM 119
Query: 226 RIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+ LLY + IIHRDLK SNI++ SD KI DFG+AR
Sbjct: 120 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKL- 176
T F K+G G FG V+K + L+G A+KR S + G + +N E+ A L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVR-IIEGIAQ 233
QH H+VR F E ++ EY SL + + R++ + +A ++ ++ + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGR 124
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNP 264
GL Y+H S ++H D+K SNI + P
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 14 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 73
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 74 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 131
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 132 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 182
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 183 RVKGRTWXLCGT 194
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 51 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 100
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 101 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 161 DCTLKILDFGLARTAG 176
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 119 SAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH 178
S Q +G+G FG V++G+ G+EVAVK S++ + + E+ L+H
Sbjct: 5 STIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRH 62
Query: 179 RHLVRLFGCCIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIA 232
+++ + +N L+ +Y + SL +L + + + +++ A
Sbjct: 63 ENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTA 116
Query: 233 QGLLYLH-----QYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
GL +LH + I HRDLK+ NIL+ + I+D G+A
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 53 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 102
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 103 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 163 DCTLKILDFGLARTAG 178
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKL- 176
T F K+G G FG V+K + L+G A+KR S + G + +N E+ A L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVR-IIEGIAQ 233
QH H+VR F E ++ EY SL + + R++ + +A ++ ++ + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGR 124
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNP 264
GL Y+H S ++H D+K SNI + P
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLTEFKN---EMMLIAKL- 176
T F K+G G FG V+K + L+G A+KR S + G + +N E+ A L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 64
Query: 177 QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGW--QARVR-IIEGIAQ 233
QH H+VR F E ++ EY SL + + R++ + +A ++ ++ + +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGR 122
Query: 234 GLLYLHQYSRLRIIHRDLKASNILLDSDMNP 264
GL Y+H S ++H D+K SNI + P
Sbjct: 123 GLRYIHSMS---LVHMDIKPSNIFISRTSIP 150
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 53 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 102
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 103 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 163 DCTLKILDFGLARTAG 178
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 45 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 94
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 155 DCTLKILDFGLARTAG 170
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 128 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
Q +G+G FG V++G+ G+EVAVK S++ + + E+ L+H +++
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 66
Query: 188 CIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH-- 239
+ +N L+ +Y + SL +L + + + +++ A GL +LH
Sbjct: 67 --DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 240 ---QYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ I HRDLK+ NIL+ + I+D G+A
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 46 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 95
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 96 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 156 DCTLKILDFGLARTAG 171
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P K+L
Sbjct: 46 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEF 95
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV+L L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 96 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 156 DCTLKILDFGLARTAG 171
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 128 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
Q +G+G FG V++G+ G+EVAVK S++ + + E+ L+H +++
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 68
Query: 188 CIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ- 240
+ +N L+ +Y + SL +L + + + +++ A GL +LH
Sbjct: 69 --DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 241 ----YSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ I HRDLK+ NIL+ + I+D G+A
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L ++VAVK L + + F+ E A L H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 187 CCIEQGE----NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QGLLYL 238
+ ++ EY+ +L D+ G R IE IA Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFS 132
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGN----TKRIVGT 290
HQ IIHRD+K +NI++ + K+ DFG+AR GN T ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQTAAVIGT 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 128 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
Q +G+G FG V++G+ G+EVAVK S++ + + E+ L+H +++
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 65
Query: 188 CIEQGEN------ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH-- 239
+ +N L+ +Y + SL +L + + + +++ A GL +LH
Sbjct: 66 --DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 240 ---QYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
+ I HRDLK+ NIL+ + I+D G+A
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCC 188
LGEG V L+ QE AVK + Q G + E+ ++ + Q HR+++ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
E+ L++E M S+ L + K+R +++ +A L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 249 RDLKASNILLD--SDMNP-KISDFGMARIFGGDELQGNTKRI 287
RDLK NIL + + ++P KI DF + G +L G+ I
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPI 173
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 54 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 103
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 104 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 163
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 164 DCTLKILDFGLARTAG 179
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 42 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 101
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 102 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 159
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 160 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 211 RVKGRTWXLCGT 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 14 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 73
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 74 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 131
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 132 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 182
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 183 RVKGRTWXLCGT 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY P ++F + R
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+++D K++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 53 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 102
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 163 DCTLKILDFGLARTAG 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + L +L + ++ EY P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFXEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 130 KLGEGGFGPVYKGRLLNGQEVAVKRL-SNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
++G+G +G V+ G+ G++VAVK + + E E+ ++H +++
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAAD 100
Query: 189 IE----QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ---- 240
I+ + LI +Y N SL +L K L ++ +++ GL +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 241 -YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD----ELQGNTKRIVGT 290
+ I HRDLK+ NIL+ + I+D G+A F D ++ NT+ VGT
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--VGT 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+P ++F + R
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 57 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 106
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 107 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 166
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 167 DCTLKILDFGLARTAG 182
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 110 LPLFSLASVSAATENFSTQCK-LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSG 160
+P S+A E+ C+ +G+G F V R +N GQ+ AVK + ++ G
Sbjct: 12 VPRGSMADDDVLFEDVYELCEVIGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPG 69
Query: 161 QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLG 220
+ K E + L+H H+V L G +++E+M L F +
Sbjct: 70 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFV 128
Query: 221 WQARV--RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNP---KISDFGMA 272
+ V + I + L Y H + IIHRD+K +LL S N K+ FG+A
Sbjct: 129 YSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 52 VAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 101
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 162 DCTLKILDFGLARTAG 177
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 131 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLT---EFKNEMMLIAKLQHRHLVRLFG 186
LG GG V+ R L ++VAVK L + + F+ E A L H +V ++
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 95
Query: 187 CCIEQGE--------NILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIA---QG 234
+ GE ++ EY+ +L D+ G R IE IA Q
Sbjct: 96 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQA 145
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG--GDELQGNTKRIVGT 290
L + HQ IIHRD+K +NI++ + K+ DFG+AR G+ + T ++GT
Sbjct: 146 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT-QTAAVIGT 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 150 VAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--- 206
VA+K+LS F+N+ AK +R LV L C + L+ + P KSL
Sbjct: 46 VAIKKLSR-------PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEF 95
Query: 207 -DVFLFYPKKKRLLGWQARVRIIEGIAQGLLY-----LHQYSRLRIIHRDLKASNILLDS 260
DV++ L ++ + LLY + IIHRDLK SNI++ S
Sbjct: 96 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 261 DMNPKISDFGMARIFG 276
D KI DFG+AR G
Sbjct: 156 DCTLKILDFGLARTAG 171
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 120 AATENFSTQCKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLTEFKNEMMLIAKLQH 178
A ++ F + +LG G VY+ + Q+ A+K L + + + E+ ++ +L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV--RTEIGVLLRLSH 107
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQG 234
++++L E L+ E + L D + +Y ++ A +I+E +A
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVA-- 162
Query: 235 LLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH+ I+HRDLK N+L + D KI+DFG+++I E Q K + GT
Sbjct: 163 --YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGT 213
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 88 RRRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKG-RLLN 146
++R++ H K + W + + + +G G +G V + L
Sbjct: 28 QQRKQHHSSKPTASMPRPHSDW----------QIPDRYEIRHLIGTGSYGHVCEAYDKLE 77
Query: 147 GQEVAVKRLSNQSGQGLTEFKN---EMMLIAKLQHRHLVRLFGCCI----EQGENILIYE 199
+ VA+K++ + + L + K E+ ++ +L H H+V++ I E+ + + +
Sbjct: 78 KRVVAIKKIL-RVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136
Query: 200 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD 259
+ + P L + ++ + G+ Y+H I+HRDLK +N L++
Sbjct: 137 EIADSDFKKLFRTPVYLTELHIKT---LLYNLLVGVKYVHSAG---ILHRDLKPANCLVN 190
Query: 260 SDMNPKISDFGMARIFGGDELQGNTK 285
D + K+ DFG+AR E GN++
Sbjct: 191 QDCSVKVCDFGLARTVDYPE-NGNSQ 215
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + L +L + ++ EY P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + L +L + ++ EY P ++F + R AR + I
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 151
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+++D K++DFG A+ ++G T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+P ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 125 FSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
+ Q +LG G FG V++ + G + AVK++ L F+ E++ A L +V
Sbjct: 74 MTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 127
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L+G E + E + SL + K+ L + + +GL YLH
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 183
Query: 243 RLRIIHRDLKASNILLDSDMN-PKISDFGMARIFGGDEL 280
RI+H D+KA N+LL SD + + DFG A D L
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 20/153 (13%)
Query: 131 LGEGGFGPVY--KGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC 188
LG G F V+ K RL G+ A+K + + +NE+ ++ K++H ++V L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 189 IEQGENILIYEYMPNKSL-DVFL---FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
L+ + + L D L Y +K L +I+ + + YLH+
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHENG-- 126
Query: 245 RIIHRDLKASNIL-LDSDMNPK--ISDFGMARI 274
I+HRDLK N+L L + N K I+DFG++++
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLF-SLASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S A +A + F LG G FG V + G A+K L Q
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE + + LV+L + ++ EY P ++F + R
Sbjct: 82 KLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D K++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I+ GL +LH+ II+RDLK N++LDS+ + KI+DFGM +
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+G G FG RL+ ++ VAVK + + G+ + E K E++ L+H ++VR
Sbjct: 27 IGAGNFG---VARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
+ ++ EY L F R +AR + + G+ Y H ++
Sbjct: 82 EVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVSYAHA---MQ 135
Query: 246 IIHRDLKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
+ HRDLK N LLD P KI+DFG ++ L K VGT
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGT 179
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT---------- 164
+A + A ++ Q + G +G V G G VA+KR+ N G T
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 165 -EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--DVFLFYPKKKRLLGW 221
E+ L+ H +++ L + E + Y+ + + D+ ++ ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 222 QARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
Q + I GL LH+ ++HRDL NILL + + I DF +AR
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPV------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG+GGFG V G++ +++ KR+ + G+ + NE ++ K+ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNSRFVVSL 249
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
+ L+ M L +++ + +A E I GL LH R
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDLH---RE 305
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
RI++RDLK NILLD + +ISD G+A
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 115 LASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLT---------- 164
+A + A ++ Q + G +G V G G VA+KR+ N G T
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 165 -EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL--DVFLFYPKKKRLLGW 221
E+ L+ H +++ L + E + Y+ + + D+ ++ ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 222 QARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
Q + I GL LH+ ++HRDL NILL + + I DF +AR
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPV------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL 184
LG+GGFG V G++ +++ KR+ + G+ + NE ++ K+ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNSRFVVSL 249
Query: 185 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
+ L+ M L +++ + +A E I GL LH R
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDLH---RE 305
Query: 245 RIIHRDLKASNILLDSDMNPKISDFGMA 272
RI++RDLK NILLD + +ISD G+A
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV 182
E + LG G FG V++ + ++ + + G K E+ ++ +HR+++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 183 RLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
L E ++I+E++ LD+F L + V + + + L +LH ++
Sbjct: 65 HLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 243 RLRIIHRDLKASNILLDS--DMNPKISDFGMAR 273
I H D++ NI+ + KI +FG AR
Sbjct: 123 ---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 125 FSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
+ Q ++G G FG V++ + G + AVK++ L F+ E++ A L +V
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 113
Query: 183 RLFGCCIEQGENILIY-EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
L+G + +G + I+ E + SL + K+ L + + +GL YLH
Sbjct: 114 PLYGA-VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 242 SRLRIIHRDLKASNILLDSDMN-PKISDFGMARIFGGDEL 280
RI+H D+KA N+LL SD + + DFG A D L
Sbjct: 170 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTEFKN---EMMLIAKLQH 178
++F +G+G FG V + + +++ A+K ++ Q E +N E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
LV L+ ++ + ++ + + L L Y ++ + + V++ I + ++ L
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLL----LGGDLRYHLQQNVHFKEETVKLF--ICELVMAL 128
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF 275
RIIHRD+K NILLD + I+DF +A +
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 113 FSLASVSAATENFSTQCK-LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSGQGL 163
+A E+ C+ +G+G F V R +N GQ+ AVK + ++ G
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 164 TEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQA 223
+ K E + L+H H+V L G +++E+M L F + +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFVYSE 129
Query: 224 RV--RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNP---KISDFGMARIFG 276
V + I + L Y H + IIHRD+K +LL S N K+ FG+A G
Sbjct: 130 AVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 130 KLGEGGFGPV--YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC 187
KLGEGGF V +G L +G A+KR+ Q E + E + H +++RL
Sbjct: 36 KLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 188 CI-EQG---ENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS 242
C+ E+G E L+ + +L + K L + ++ GI +GL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 243 RLRIIHRDLKASNILLDSDMNPKISDFG 270
HRDLK +NILL + P + D G
Sbjct: 155 ---YAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 125 FSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFK-NEMMLIAKLQHRHLV 182
+ Q ++G G FG V++ + G + AVK++ L F+ E++ A L +V
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 129
Query: 183 RLFGCCIEQGENILIY-EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
L+G + +G + I+ E + SL + K+ L + + +GL YLH
Sbjct: 130 PLYGA-VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 242 SRLRIIHRDLKASNILLDSDMN-PKISDFGMARIFGGDEL 280
RI+H D+KA N+LL SD + + DFG A D L
Sbjct: 186 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFK---NEMM 171
A +A + F LG G FG V + + G A+K L Q L + + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGI 231
++ + LV+L + ++ EY+ ++F + R AR + I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQ-I 150
Query: 232 AQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNTKRIVGT 290
YLH L +I+RDLK N+L+D +++DFG A+ ++G T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 149
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+G G FG RL+ ++ VAVK + + G+ + E K E++ L+H ++VR
Sbjct: 26 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 80
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
+ ++ EY L F R +AR + + G+ Y H ++
Sbjct: 81 EVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVSYCHA---MQ 134
Query: 246 IIHRDLKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
+ HRDLK N LLD P KI DFG ++ L K VGT
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 178
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQ----HR 179
LG+GGFG V+ G RL + +VA+K + G + + E+ L+ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH 239
++RL E E ++ P + D+F + +K L +R + +A H
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA---IQH 154
Query: 240 QYSRLRIIHRDLKASNILLDSDMN-PKISDFG 270
+SR ++HRD+K NIL+D K+ DFG
Sbjct: 155 CHSR-GVVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 148
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 149 G---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNX 129
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 149
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 162
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ + L R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------RR 134
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
+G A AQ +L L +I+RDLK N+L+D +++DFG A+
Sbjct: 135 IGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 149
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 162
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 134
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 168
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 169 G---VLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 176
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 177 G---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 148
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 149 G---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 161
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 134
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 161
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 162
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 181
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 182 G---VLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 162
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 161
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 134
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 133
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 134 G---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 122 TENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTE---FKNEMMLIAKLQ 177
E++ +G G FG V R Q+V A+K LS ++ F E ++A
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 178 HRHLVRLFGCCIEQGENI-LIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIAQGL 235
+V+LF C + + + ++ EYMP L ++ Y ++ + A+ +
Sbjct: 134 SPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT--------AEVV 184
Query: 236 LYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
L L + +IHRD+K N+LLD + K++DFG
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 176
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 177 G---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 161
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IA GL +L II+RDLK N++LDS+ + KI+DFGM +
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 42 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 101
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 102 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 159
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 160 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 211 RVKGRTWXLCGT 222
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 132
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 133 G---VLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 129
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 131 LGEGGFGPV-----------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
LG+G FG V Y ++L + + K ++ LTE + ++ +H
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---DEVAHTLTENR----VLQNSRHP 208
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYL 238
L L + EY L F+ ++R+ + R R I L YL
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYL 264
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
H S +++RDLK N++LD D + KI+DFG+ +
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 129
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 131 LGEGGFGPV-----------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
LG+G FG V Y ++L + + K ++ LTE + ++ +H
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---DEVAHTLTENR----VLQNSRHP 211
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYL 238
L L + EY L F+ ++R+ + R R I L YL
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYL 267
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
H S +++RDLK N++LD D + KI+DFG+ +
Sbjct: 268 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
IA GL +L II+RDLK N++LDS+ + KI+DFGM +
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLAGT 201
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 16 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 75
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 76 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 133
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 134 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 184
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 185 RVKGRTWXLCGT 196
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 131 LGEGGFGPV-----------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
LG+G FG V Y ++L + + K ++ LTE + ++ +H
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---DEVAHTLTENR----VLQNSRHP 68
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYL 238
L L + EY L F+ ++R+ + R R I L YL
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYL 124
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
H S +++RDLK N++LD D + KI+DFG+ +
Sbjct: 125 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 XEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E P D+F F ++ L AR + + + + + H
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ-VLEAVRHCHNC 156
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 157 G---VLHRDIKDENILIDLNRGELKLIDFG 183
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 131 LGEGGFGPV-----------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
LG+G FG V Y ++L + + K ++ LTE + ++ +H
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---DEVAHTLTENR----VLQNSRHP 69
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYL 238
L L + EY L F+ ++R+ + R R I L YL
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYL 125
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
H S +++RDLK N++LD D + KI+DFG+ +
Sbjct: 126 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 131 LGEGGFGPV-----------YKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR 179
LG+G FG V Y ++L + + K ++ LTE + ++ +H
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---DEVAHTLTENR----VLQNSRHP 70
Query: 180 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYL 238
L L + EY L F+ ++R+ + R R I L YL
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYL 126
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
H S +++RDLK N++LD D + KI+DFG+ +
Sbjct: 127 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLXGT 201
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 63/211 (29%)
Query: 128 QCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
QC +G GGFG V++ + ++ A+KR+ + + E E+ +AKL+H +VR F
Sbjct: 12 QC-MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 70
Query: 186 GCCIEQGENILIYE----YMPNKSLDVFLFYP---------------------------- 213
+E E ++ ++S D L P
Sbjct: 71 NAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPS 130
Query: 214 -------------KKKRLLGWQAR------------VRIIEGIAQGLLYLHQYSRLRIIH 248
+K+ L W R + I IA+ + +LH ++H
Sbjct: 131 SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMH 187
Query: 249 RDLKASNILLDSDMNPKISDFGMARIFGGDE 279
RDLK SNI D K+ DFG+ DE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 124 NFSTQCKLGEGGFGP-VYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHL 181
+F + LG G G VY+G + + ++VAVKR+ + + E+ L+ + +H ++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNV 80
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFL-FYPKKKRL--LGWQARVRIIEGIAQGLLYL 238
+R F C E+ ++Y+ + L Y ++K LG + + +++ GL +L
Sbjct: 81 IRYF--CTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHL 134
Query: 239 HQYSRLRIIHRDLKASNILLD-----SDMNPKISDFGMAR 273
H L I+HRDLK NIL+ + ISDFG+ +
Sbjct: 135 HS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 22 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 81
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 139
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 140 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 191 RVKGRTWXLCGT 202
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 131 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKN------EMMLIAKLQH--RHL 181
LG GGFG VY G R+ + VA+K + E N E++L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 182 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+RL +LI E M D+F F ++ L AR + + + + H
Sbjct: 76 IRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 133
Query: 242 SRLRIIHRDLKASNILLDSDMNP-KISDFG 270
++HRD+K NIL+D + K+ DFG
Sbjct: 134 G---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 8 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 67
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 68 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 125
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 126 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK----- 176
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 177 RVKGRTWXLCGT 188
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 131 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLFGCC 188
+G G FG R L + VAVK + + G + E + E++ L+H ++VR
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 189 IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH 248
+ +I EY L + R +AR + + G+ Y H ++I H
Sbjct: 86 LTPTHLAIIMEYASGGEL--YERICNAGRFSEDEARF-FFQQLLSGVSYCHS---MQICH 139
Query: 249 RDLKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
RDLK N LLD P KI DFG ++ L K VGT
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 180
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 42 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 101
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 102 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 159
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 160 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 211 RVKGATWTLCGT 222
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+L+D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLTEFKNEMML 172
++ +FS +G GGFG VY R + G+ A+K L + QG T NE ++
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEY---MPNK---SLDVF----LFYPKKKRLLGWQ 222
++ LV C I+ Y P+K LD+ L Y + + +
Sbjct: 242 LS------LVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 290
Query: 223 ARVRIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
A +R I GL ++H +R +++RDLK +NILLD + +ISD G+A
Sbjct: 291 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLTEFKNEMML 172
++ +FS +G GGFG VY R + G+ A+K L + QG T NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEY---MPNK---SLDVF----LFYPKKKRLLGWQ 222
++ LV C I+ Y P+K LD+ L Y + + +
Sbjct: 243 LS------LVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 223 ARVRIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
A +R I GL ++H +R +++RDLK +NILLD + +ISD G+A
Sbjct: 292 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 11/162 (6%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE 190
+G G FG R E+ + + + K E++ L+H ++VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 191 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRD 250
++ EY L F R +AR + + G+ Y H +++ HRD
Sbjct: 87 PTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVSYCHA---MQVCHRD 140
Query: 251 LKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
LK N LLD P KI DFG ++ L K VGT
Sbjct: 141 LKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 179
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 KSKDSWLPLFSLASVSAAT-ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ 161
K+K+ +L + S + A + F LG G FG V + +G A+K L Q
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV 80
Query: 162 GLTEFK---NEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRL 218
L + + NE ++ + LV+L + ++ EY+ ++F + R
Sbjct: 81 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRF 138
Query: 219 LGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD 278
AR + I YLH L +I+RDLK N+++D +++DFG A+
Sbjct: 139 SEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK----- 189
Query: 279 ELQGNTKRIVGT 290
++G T + GT
Sbjct: 190 RVKGRTWXLCGT 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLTEFKNEMML 172
++ +FS +G GGFG VY R + G+ A+K L + QG T NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEY---MPNK---SLDVF----LFYPKKKRLLGWQ 222
++ LV C I+ Y P+K LD+ L Y + + +
Sbjct: 243 LS------LVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 223 ARVRIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
A +R I GL ++H +R +++RDLK +NILLD + +ISD G+A
Sbjct: 292 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 117 SVSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLTEFKNEMML 172
++ +FS +G GGFG VY R + G+ A+K L + QG T NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 173 IAKLQHRHLVRLFGCCIEQGENILIYEY---MPNK---SLDVF----LFYPKKKRLLGWQ 222
++ LV C I+ Y P+K LD+ L Y + + +
Sbjct: 243 LS------LVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 223 ARVRIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA 272
A +R I GL ++H +R +++RDLK +NILLD + +ISD G+A
Sbjct: 292 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 123 ENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTE---FKNEMMLIAKLQH 178
E+F +G G FG V +L N +V A+K L+ E F+ E ++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 179 RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL 238
+ + L + L+ +Y L + L + RL AR + A+ ++ +
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYL----AEMVIAI 188
Query: 239 HQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
+L +HRD+K NIL+D + + +++DFG
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 116 ASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMM 171
A +F LG+G FG V R G+ A+K L + + + E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 172 LIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG- 230
++ +H L L + EY L F+ ++R+ + R R
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAE 116
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
I L YLH +++RD+K N++LD D + KI+DFG+ +
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 122 TENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTE---FKNEMMLIAKLQ 177
E++ +G G FG V R + ++V A+K LS ++ F E ++A
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSL-------DVFLFYPKKKRLLGWQARVRIIEG 230
+V+LF + ++ EYMP L DV P+K W AR
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEK-----W-ARFYT--- 179
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
A+ +L L + IHRD+K N+LLD + K++DFG
Sbjct: 180 -AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 122 TENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTE---FKNEMMLIAKLQ 177
E++ +G G FG V R + ++V A+K LS ++ F E ++A
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSL-------DVFLFYPKKKRLLGWQARVRIIEG 230
+V+LF + ++ EYMP L DV P+K W AR
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEK-----W-ARFYT--- 174
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
A+ +L L + IHRD+K N+LLD + K++DFG
Sbjct: 175 -AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 89 RRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCK-LGEGGFGPVYKGRLLNG 147
+++RK + G+ KS+ + +P F + +N K LG G G V G
Sbjct: 3 KKKRKRGSRGGKKGRKSRIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQG 57
Query: 148 QEVAVKR-LSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL-IYEYMPNKS 205
+ VAVKR L + L E K +L H +++R + C E + L I + N +
Sbjct: 58 RPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY--CSETTDRFLYIALELCNLN 112
Query: 206 LDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 260
L + + +L + ++ IA G+ +LH L+IIHRDLK NIL+ +
Sbjct: 113 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTS 169
Query: 261 ------------DMNPKISDFGMAR 273
++ ISDFG+ +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCK 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 89 RRRRKHKEKDGEGNDKSKDSWLPLFSLASVSAATENFSTQCK-LGEGGFGPVYKGRLLNG 147
+++RK + G+ KS+ + +P F + +N K LG G G V G
Sbjct: 3 KKKRKRGSRGGKKGRKSRIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQG 57
Query: 148 QEVAVKR-LSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL-IYEYMPNKS 205
+ VAVKR L + L E K +L H +++R + C E + L I + N +
Sbjct: 58 RPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY--CSETTDRFLYIALELCNLN 112
Query: 206 LDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 260
L + + +L + ++ IA G+ +LH L+IIHRDLK NIL+ +
Sbjct: 113 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTS 169
Query: 261 ------------DMNPKISDFGMAR 273
++ ISDFG+ +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCK 194
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 122 TENFSTQCKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLTE---FKNEMMLIAKLQ 177
E++ +G G FG V R + ++V A+K LS ++ F E ++A
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 178 HRHLVRLFGCCIEQGENILIYEYMPNKSL-------DVFLFYPKKKRLLGWQARVRIIEG 230
+V+LF + ++ EYMP L DV P+K W AR
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEK-----W-ARFYT--- 179
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG 270
A+ +L L + IHRD+K N+LLD + K++DFG
Sbjct: 180 -AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 237 YLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
YLH+ IIHRDLK N+LL S D KI+DFG ++I G L
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKRLSNQS-------GQGLTEFKNEMMLIAKLQHRHLVR 183
LGEG +G V + +L+ + + + + G K E+ L+ +L+H+++++
Sbjct: 13 LGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 184 LFGCCI--EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
L E+ + ++ EY ++ P+K R QA + I GL YLH
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLI-DGLEYLHSQ 128
Query: 242 SRLRIIHRDLKASNILLDSDMNPKISDFGMARI---FGGDE 279
I+H+D+K N+LL + KIS G+A F D+
Sbjct: 129 G---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 73 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 125
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 78 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 130
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 73 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 125
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L S + IHRDL A NILL + KI DFG+AR
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 121 ATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLTEFKNEMMLIA 174
A E LG G FG V + + VAVK L + G +E+K M +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML--KEGATASEYKALMTELK 82
Query: 175 KLQH--RHL--VRLFGCCIEQGENIL-IYEYMPNKSLDVF------LFYPKKKRLLGWQA 223
L H HL V L G C +QG ++ I EY +L + LF+ K L +
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEP 142
Query: 224 RVRIIE-GIAQG 234
+ +E G+ QG
Sbjct: 143 KKEKMEPGLEQG 154
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 73 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 125
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 73 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 125
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+G G FG RL+ ++ VAVK + + G+ + E K E++ L+H ++VR
Sbjct: 27 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
+ ++ EY L F R +AR + + G+ Y H ++
Sbjct: 82 EVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVSYCHA---MQ 135
Query: 246 IIHRDLKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
+ HRDLK N LLD P KI FG ++ L K VGT
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGT 179
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 131 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFG 186
LG+G FG V R G+ A+K L + + + E ++ +H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 187 CCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEG-IAQGLLYLHQYSRLR 245
+ EY L F+ ++R+ + R R I L YLH
Sbjct: 73 AFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHSRD--- 125
Query: 246 IIHRDLKASNILLDSDMNPKISDFGMAR 273
+++RD+K N++LD D + KI+DFG+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 131 LGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLTE-FKNEMMLIAKLQHRHLVRLF 185
+G G FG RL+ ++ VAVK + + G+ + E K E++ L+H ++VR
Sbjct: 27 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 186 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR 245
+ ++ EY L F R +AR + + G+ Y H ++
Sbjct: 82 EVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVSYCHA---MQ 135
Query: 246 IIHRDLKASNILLDSDMNP--KISDFGMARIFGGDELQGNTKRIVGT 290
+ HRDLK N LLD P KI FG ++ L K VGT
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGT 179
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 130 KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRL--- 184
+LG GGFG V + G++VA+K+ + S + + E+ ++ KL H ++V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 185 ---FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+L EY L +L + L ++ I+ L YLH+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 242 SRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
RIIHRDLK NI+L + KI D G A+ EL
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 258
+II+ + QGL YLH ++ RIIH D+K NILL
Sbjct: 150 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILL 180
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 130 KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRL--- 184
+LG GGFG V + G++VA+K+ + S + + E+ ++ KL H ++V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 185 ---FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY 241
+L EY L +L + L ++ I+ L YLH+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 242 SRLRIIHRDLKASNILLDS---DMNPKISDFGMARIFGGDEL 280
RIIHRDLK NI+L + KI D G A+ EL
Sbjct: 141 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 226 RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 258
+II+ + QGL YLH ++ RIIH D+K NILL
Sbjct: 134 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILL 164
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 130 KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL------- 181
K+G G FG +Y G + +EVA+K L N + K+ +L +R L
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIK-LEN------VKTKHPQLLYESKIYRILQGGTGIP 66
Query: 182 -VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ 240
VR FG +E N+L+ + + D+F F +K L + + + + + + ++H
Sbjct: 67 NVRWFG--VEGDYNVLVMDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 121
Query: 241 YSRLRIIHRDLKASNILLDSDMNPK---ISDFGMARIF 275
S +HRD+K N L+ I DFG+A+ +
Sbjct: 122 KS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 131 LGEGGFGPVYKGRLLNGQEVAVKR-LSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCI 189
LG G G V G+ VAVKR L + L E K +L H +++R + C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY--CS 77
Query: 190 EQGENIL-IYEYMPNKSLDVFL----FYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRL 244
E + L I + N +L + + +L + ++ IA G+ +LH L
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 245 RIIHRDLKASNILLDS-------------DMNPKISDFGMAR 273
+IIHRDLK NIL+ + ++ ISDFG+ +
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 231 IAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR 273
+A+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,496,949
Number of Sequences: 62578
Number of extensions: 338229
Number of successful extensions: 2475
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 1099
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)