Query 022889
Match_columns 290
No_of_seqs 142 out of 1582
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:49:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 3.2E-54 1.1E-58 384.1 25.2 257 1-273 49-311 (312)
2 3n2t_A Putative oxidoreductase 100.0 8.5E-54 2.9E-58 386.5 27.4 258 1-274 66-332 (348)
3 3erp_A Putative oxidoreductase 100.0 7.5E-53 2.6E-57 381.0 30.6 258 1-271 78-349 (353)
4 1pz1_A GSP69, general stress p 100.0 3E-53 1E-57 380.9 26.7 260 1-274 48-313 (333)
5 3eau_A Voltage-gated potassium 100.0 2E-53 6.9E-58 381.4 25.4 262 1-274 47-324 (327)
6 3n6q_A YGHZ aldo-keto reductas 100.0 1E-52 3.5E-57 379.5 29.1 265 1-275 57-336 (346)
7 1gve_A Aflatoxin B1 aldehyde r 100.0 9.5E-53 3.2E-57 377.0 28.1 270 1-289 36-327 (327)
8 3lut_A Voltage-gated potassium 100.0 3.5E-53 1.2E-57 385.2 25.3 270 1-289 81-366 (367)
9 3v0s_A Perakine reductase; AKR 100.0 1.6E-53 5.6E-58 383.2 19.8 257 1-274 48-312 (337)
10 1lqa_A TAS protein; TIM barrel 100.0 6.4E-52 2.2E-56 374.5 29.7 259 1-275 44-342 (346)
11 2bp1_A Aflatoxin B1 aldehyde r 100.0 4.4E-52 1.5E-56 376.8 26.3 271 1-289 69-360 (360)
12 1ur3_M Hypothetical oxidoreduc 100.0 3.6E-51 1.2E-55 364.9 27.8 237 1-274 67-316 (319)
13 3up8_A Putative 2,5-diketo-D-g 100.0 5.1E-51 1.8E-55 360.0 24.4 217 1-272 61-281 (298)
14 1ynp_A Oxidoreductase, AKR11C1 100.0 6E-51 2E-55 363.3 23.8 243 1-275 62-311 (317)
15 4f40_A Prostaglandin F2-alpha 100.0 2E-50 6.8E-55 355.5 22.2 222 1-277 49-280 (288)
16 3f7j_A YVGN protein; aldo-keto 100.0 3.5E-50 1.2E-54 351.8 22.8 219 1-276 45-267 (276)
17 3o0k_A Aldo/keto reductase; ss 100.0 2.3E-50 7.9E-55 353.7 20.8 215 1-270 64-282 (283)
18 3b3e_A YVGN protein; aldo-keto 100.0 6E-50 2.1E-54 355.0 22.8 219 1-276 79-301 (310)
19 2wzm_A Aldo-keto reductase; ox 100.0 7.5E-50 2.6E-54 350.6 22.5 220 1-275 49-272 (283)
20 4gie_A Prostaglandin F synthas 100.0 7.9E-50 2.7E-54 351.9 22.5 224 1-276 52-277 (290)
21 3o3r_A Aldo-keto reductase fam 100.0 1.7E-49 5.7E-54 354.1 24.3 241 1-287 40-309 (316)
22 1vbj_A Prostaglandin F synthas 100.0 1.5E-49 5.3E-54 348.2 22.9 218 1-275 48-269 (281)
23 1hw6_A 2,5-diketo-D-gluconic a 100.0 1.2E-49 4E-54 348.8 21.0 221 1-274 41-265 (278)
24 4gac_A Alcohol dehydrogenase [ 100.0 2.5E-49 8.5E-54 354.4 22.3 237 1-276 40-297 (324)
25 3buv_A 3-OXO-5-beta-steroid 4- 100.0 9E-49 3.1E-53 350.8 25.3 231 1-275 49-307 (326)
26 1qwk_A Aldose reductase, aldo- 100.0 3.1E-49 1.1E-53 352.5 22.1 238 1-275 43-297 (317)
27 3ln3_A Dihydrodiol dehydrogena 100.0 1.2E-48 4E-53 350.0 25.8 232 1-276 47-306 (324)
28 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 7.8E-49 2.7E-53 350.7 24.4 231 1-275 46-304 (323)
29 1vp5_A 2,5-diketo-D-gluconic a 100.0 1.2E-48 4.2E-53 344.8 23.4 218 1-274 53-278 (298)
30 1s1p_A Aldo-keto reductase fam 100.0 2.1E-48 7.1E-53 349.0 25.1 231 1-275 46-304 (331)
31 1us0_A Aldose reductase; oxido 100.0 3.1E-48 1.1E-52 345.9 25.9 230 1-275 40-297 (316)
32 3b3d_A YTBE protein, putative 100.0 3.9E-49 1.3E-53 351.0 19.4 222 1-277 79-306 (314)
33 1mzr_A 2,5-diketo-D-gluconate 100.0 1.2E-48 3.9E-53 344.6 21.3 219 1-275 63-286 (296)
34 3krb_A Aldose reductase; ssgci 100.0 2.1E-48 7.3E-53 349.2 23.3 231 1-274 52-317 (334)
35 1zgd_A Chalcone reductase; pol 100.0 2.2E-48 7.4E-53 346.3 21.7 225 1-274 49-296 (312)
36 1mi3_A Xylose reductase, XR; a 100.0 6E-48 2E-52 345.0 23.6 234 1-275 43-308 (322)
37 3h7u_A Aldo-keto reductase; st 100.0 7.8E-48 2.7E-52 345.6 22.7 226 1-274 63-309 (335)
38 2bgs_A Aldose reductase; holoe 100.0 1.1E-47 3.8E-52 345.1 23.3 222 1-275 75-317 (344)
39 3h7r_A Aldo-keto reductase; st 100.0 8.5E-48 2.9E-52 344.6 21.6 227 1-275 59-306 (331)
40 4exb_A Putative uncharacterize 100.0 2.6E-48 8.8E-53 342.3 17.3 204 1-262 84-292 (292)
41 3cf4_A Acetyl-COA decarboxylas 98.4 1.3E-07 4.5E-12 92.9 3.9 96 56-159 231-347 (807)
42 1wv2_A Thiazole moeity, thiazo 93.4 3.1 0.0001 34.9 14.3 106 45-153 82-192 (265)
43 1ydn_A Hydroxymethylglutaryl-C 77.9 11 0.00038 32.0 8.9 105 47-156 23-141 (295)
44 4djd_D C/Fe-SP, corrinoid/iron 77.4 7.2 0.00025 33.8 7.5 100 52-157 82-189 (323)
45 1nvm_A HOA, 4-hydroxy-2-oxoval 71.5 24 0.00083 30.7 9.6 105 46-154 26-139 (345)
46 2ftp_A Hydroxymethylglutaryl-C 68.1 39 0.0013 28.6 10.0 106 46-154 26-143 (302)
47 2yci_X 5-methyltetrahydrofolat 65.1 61 0.0021 27.1 11.7 101 48-160 32-137 (271)
48 3ihk_A Thiamin pyrophosphokina 64.4 38 0.0013 27.4 8.7 40 217-256 73-113 (218)
49 1ydo_A HMG-COA lyase; TIM-barr 64.4 35 0.0012 29.1 8.9 106 46-154 24-141 (307)
50 3lm8_A Thiamine pyrophosphokin 62.2 43 0.0015 27.1 8.7 39 217-255 79-117 (222)
51 3k94_A Thiamin pyrophosphokina 61.9 47 0.0016 26.9 8.9 39 217-255 78-116 (223)
52 1kko_A 3-methylaspartate ammon 61.6 88 0.003 27.8 11.7 106 47-157 249-361 (413)
53 3mel_A Thiamin pyrophosphokina 60.1 46 0.0016 26.9 8.5 40 217-256 77-117 (222)
54 2q5c_A NTRC family transcripti 59.8 50 0.0017 26.1 8.5 67 83-155 80-149 (196)
55 2dsk_A Chitinase; catalytic do 58.9 39 0.0013 29.0 8.2 106 15-126 63-177 (311)
56 3k13_A 5-methyltetrahydrofolat 52.8 83 0.0028 26.8 9.2 103 48-160 35-145 (300)
57 3gd6_A Muconate cycloisomerase 51.7 61 0.0021 28.5 8.6 83 71-160 218-301 (391)
58 2chr_A Chloromuconate cycloiso 50.2 1.3E+02 0.0043 26.1 11.8 73 87-160 228-302 (370)
59 1eye_A DHPS 1, dihydropteroate 49.4 1.2E+02 0.004 25.5 11.7 103 46-156 25-132 (280)
60 4h1z_A Enolase Q92ZS5; dehydra 46.7 69 0.0024 28.4 8.2 87 67-161 257-346 (412)
61 1vp8_A Hypothetical protein AF 46.2 1.1E+02 0.0038 24.3 10.1 89 70-160 17-110 (201)
62 3tha_A Tryptophan synthase alp 46.2 1E+02 0.0035 25.5 8.5 73 68-149 42-117 (252)
63 1tx2_A DHPS, dihydropteroate s 45.8 1.3E+02 0.0044 25.5 9.3 100 49-156 62-167 (297)
64 3dg3_A Muconate cycloisomerase 45.4 66 0.0022 28.0 7.7 85 69-160 212-298 (367)
65 3vnd_A TSA, tryptophan synthas 45.4 1.3E+02 0.0045 25.0 11.6 30 122-151 97-126 (267)
66 2xvc_A ESCRT-III, SSO0910; cel 45.2 15 0.0005 23.0 2.3 18 83-100 39-56 (59)
67 3s5s_A Mandelate racemase/muco 44.5 65 0.0022 28.4 7.5 87 67-160 215-303 (389)
68 3ik4_A Mandelate racemase/muco 44.1 75 0.0026 27.7 7.9 87 67-160 214-302 (365)
69 1f6y_A 5-methyltetrahydrofolat 43.0 1.4E+02 0.0048 24.7 12.0 100 48-156 23-124 (262)
70 1wuf_A Hypothetical protein LI 42.2 63 0.0022 28.5 7.1 87 68-160 227-315 (393)
71 1chr_A Chloromuconate cycloiso 41.4 1.2E+02 0.0042 26.3 8.8 86 69-160 215-302 (370)
72 1t57_A Conserved protein MTH16 40.8 1.4E+02 0.0047 23.8 10.0 88 70-160 25-117 (206)
73 1y7y_A C.AHDI; helix-turn-heli 40.7 23 0.00077 22.3 3.0 27 203-229 13-39 (74)
74 3jva_A Dipeptide epimerase; en 40.3 1.5E+02 0.005 25.6 9.1 84 68-157 209-294 (354)
75 2htm_A Thiazole biosynthesis p 40.3 56 0.0019 27.3 5.9 105 45-153 72-183 (268)
76 2rdx_A Mandelate racemase/muco 40.2 72 0.0025 27.9 7.1 73 87-160 226-300 (379)
77 2qde_A Mandelate racemase/muco 40.2 73 0.0025 28.0 7.2 73 87-160 229-303 (397)
78 3u9i_A Mandelate racemase/muco 40.0 79 0.0027 27.9 7.4 86 68-160 245-332 (393)
79 2nql_A AGR_PAT_674P, isomerase 40.0 48 0.0016 29.1 6.0 102 46-160 218-321 (388)
80 1nu5_A Chloromuconate cycloiso 39.9 1.8E+02 0.0062 25.0 10.2 73 87-160 228-302 (370)
81 2h9a_B CO dehydrogenase/acetyl 39.5 1.1E+02 0.0039 26.1 8.0 96 53-156 77-181 (310)
82 2cw6_A Hydroxymethylglutaryl-C 39.3 47 0.0016 28.0 5.6 106 46-154 23-140 (298)
83 3fcp_A L-Ala-D/L-Glu epimerase 38.2 96 0.0033 27.1 7.7 73 87-160 233-307 (381)
84 1mdl_A Mandelate racemase; iso 38.2 97 0.0033 26.7 7.6 99 46-156 199-299 (359)
85 4ggi_A UDP-2,3-diacylglucosami 38.2 46 0.0016 28.0 5.3 47 109-157 234-280 (283)
86 3h87_C Putative uncharacterize 38.2 84 0.0029 20.6 5.7 58 203-265 12-69 (73)
87 1r0m_A N-acylamino acid racema 37.9 1.2E+02 0.0041 26.3 8.2 73 87-160 228-302 (375)
88 3l8m_A Probable thiamine pyrop 37.6 45 0.0015 26.8 4.9 41 216-256 74-114 (212)
89 1uwk_A Urocanate hydratase; hy 37.6 53 0.0018 30.1 5.7 60 61-128 205-264 (557)
90 2r1j_L Repressor protein C2; p 37.4 17 0.00059 22.4 2.0 50 206-255 8-57 (68)
91 4f3h_A Fimxeal, putative uncha 37.3 45 0.0015 27.0 5.0 102 49-155 108-220 (250)
92 2pgw_A Muconate cycloisomerase 36.9 1.2E+02 0.0041 26.4 8.1 73 87-160 230-304 (384)
93 2pju_A Propionate catabolism o 36.8 1.1E+02 0.0037 24.8 7.2 98 52-155 48-161 (225)
94 1sjd_A N-acylamino acid racema 36.5 2.1E+02 0.007 24.6 9.6 102 46-160 193-296 (368)
95 2ewt_A BLDD, putative DNA-bind 36.1 26 0.00089 21.9 2.7 23 204-226 9-31 (71)
96 3b7h_A Prophage LP1 protein 11 36.0 23 0.00079 22.6 2.5 51 206-256 10-61 (78)
97 3l9c_A 3-dehydroquinate dehydr 36.0 1.8E+02 0.0063 24.0 10.3 35 38-72 97-131 (259)
98 2a6c_A Helix-turn-helix motif; 35.3 37 0.0013 22.3 3.5 32 203-234 18-49 (83)
99 1wa3_A 2-keto-3-deoxy-6-phosph 34.9 1.6E+02 0.0054 22.8 9.7 89 48-153 20-109 (205)
100 1x87_A Urocanase protein; stru 34.8 55 0.0019 30.0 5.3 60 61-128 200-259 (551)
101 2y5s_A DHPS, dihydropteroate s 34.7 2.1E+02 0.0071 24.2 8.8 100 48-156 44-148 (294)
102 3r0u_A Enzyme of enolase super 34.4 1.8E+02 0.0062 25.4 8.8 87 68-160 214-302 (379)
103 3ijw_A Aminoglycoside N3-acety 33.9 63 0.0022 27.1 5.3 53 53-105 17-74 (268)
104 1pii_A N-(5'phosphoribosyl)ant 33.8 1.7E+02 0.0059 26.4 8.6 71 48-129 264-335 (452)
105 4hv0_A AVTR; ribbon-helix-heli 33.6 61 0.0021 22.7 4.2 26 203-228 8-33 (106)
106 3dgb_A Muconate cycloisomerase 33.3 1E+02 0.0035 27.0 7.0 73 87-160 234-308 (382)
107 3s83_A Ggdef family protein; s 33.3 51 0.0018 26.8 4.8 100 51-155 106-216 (259)
108 2nyg_A YOKD protein; PFAM02522 33.2 65 0.0022 27.0 5.4 53 53-105 15-72 (273)
109 2fkn_A Urocanate hydratase; ro 33.1 54 0.0019 30.0 5.0 60 61-128 201-260 (552)
110 3q45_A Mandelate racemase/muco 33.0 99 0.0034 26.9 6.8 73 87-160 224-298 (368)
111 3qld_A Mandelate racemase/muco 32.9 83 0.0028 27.7 6.3 88 67-160 214-303 (388)
112 1tkk_A Similar to chloromucona 32.6 2.4E+02 0.0081 24.2 9.9 73 87-160 227-301 (366)
113 3bjs_A Mandelate racemase/muco 32.3 1.5E+02 0.005 26.4 7.9 101 46-159 239-342 (428)
114 3lab_A Putative KDPG (2-keto-3 32.1 1.3E+02 0.0043 24.3 6.7 58 87-153 52-117 (217)
115 2og9_A Mandelate racemase/muco 31.2 1.9E+02 0.0064 25.3 8.4 100 46-157 217-318 (393)
116 3fv9_G Mandelate racemase/muco 31.1 1.7E+02 0.0057 25.6 8.0 85 67-160 220-306 (386)
117 4djd_C C/Fe-SP, corrinoid/iron 30.9 2E+02 0.0069 25.9 8.4 81 67-156 127-209 (446)
118 2zc8_A N-acylamino acid racema 30.6 1.3E+02 0.0046 25.9 7.3 73 87-160 221-295 (369)
119 3kz3_A Repressor protein CI; f 30.5 78 0.0027 20.2 4.5 53 205-257 14-66 (80)
120 2b5a_A C.BCLI; helix-turn-heli 30.3 36 0.0012 21.5 2.7 53 204-256 11-63 (77)
121 2k9q_A Uncharacterized protein 30.2 24 0.00081 22.7 1.8 51 206-256 5-55 (77)
122 3sma_A FRBF; N-acetyl transfer 30.0 97 0.0033 26.2 5.9 53 53-105 24-81 (286)
123 2qq6_A Mandelate racemase/muco 29.9 2.3E+02 0.0079 24.8 8.8 70 87-157 250-321 (410)
124 2o56_A Putative mandelate race 29.8 1.7E+02 0.006 25.6 8.0 70 87-157 255-326 (407)
125 4e8g_A Enolase, mandelate race 29.6 2.2E+02 0.0077 24.9 8.6 85 68-161 236-322 (391)
126 3mwc_A Mandelate racemase/muco 29.4 2.3E+02 0.0078 24.9 8.7 102 46-160 215-318 (400)
127 2poz_A Putative dehydratase; o 29.3 2.3E+02 0.0079 24.6 8.7 70 87-157 239-310 (392)
128 1kcz_A Beta-methylaspartase; b 29.3 2.4E+02 0.0084 24.8 8.9 86 72-159 271-364 (413)
129 3i4k_A Muconate lactonizing en 29.1 2.7E+02 0.0091 24.2 9.0 73 87-160 234-308 (383)
130 4hpn_A Putative uncharacterize 29.0 1.6E+02 0.0054 25.6 7.5 68 87-155 228-297 (378)
131 1wue_A Mandelate racemase/muco 29.0 82 0.0028 27.6 5.6 87 68-160 227-315 (386)
132 2pp0_A L-talarate/galactarate 28.8 2.9E+02 0.01 24.1 9.4 69 87-156 260-330 (398)
133 1v5x_A PRA isomerase, phosphor 28.6 1.2E+02 0.0041 24.1 6.0 73 48-129 10-83 (203)
134 3qq6_A HTH-type transcriptiona 27.8 27 0.00091 22.7 1.7 51 206-256 13-64 (78)
135 2akz_A Gamma enolase, neural; 27.8 3.3E+02 0.011 24.3 10.7 97 47-154 270-369 (439)
136 2gl5_A Putative dehydratase pr 27.6 3.1E+02 0.01 24.0 9.2 69 87-156 258-328 (410)
137 3f6w_A XRE-family like protein 27.3 42 0.0014 21.7 2.7 54 203-256 14-67 (83)
138 1adr_A P22 C2 repressor; trans 27.2 48 0.0017 20.8 2.9 50 206-255 8-57 (76)
139 2p3z_A L-rhamnonate dehydratas 27.1 2.6E+02 0.0091 24.7 8.6 97 47-156 233-333 (415)
140 2zad_A Muconate cycloisomerase 26.6 2E+02 0.0069 24.5 7.6 104 46-160 192-297 (345)
141 3s8q_A R-M controller protein; 26.5 45 0.0015 21.5 2.7 54 204-257 12-65 (82)
142 3guv_A Site-specific recombina 26.3 66 0.0023 24.3 4.0 21 85-105 60-82 (167)
143 2qgy_A Enolase from the enviro 26.1 3.2E+02 0.011 23.7 11.3 98 47-156 205-304 (391)
144 3ekg_A Mandelate racemase/muco 25.9 2.2E+02 0.0077 25.1 7.9 82 68-155 236-321 (404)
145 2omk_A Hypothetical protein; s 25.9 1E+02 0.0034 25.1 5.2 40 216-255 104-143 (231)
146 3ks6_A Glycerophosphoryl diest 25.9 1.6E+02 0.0056 23.8 6.6 60 93-156 126-212 (250)
147 1dw9_A Cyanate lyase; cyanate 25.9 34 0.0012 26.2 2.1 63 205-269 15-77 (156)
148 3cq9_A Uncharacterized protein 25.8 75 0.0025 25.8 4.4 41 216-256 77-118 (227)
149 2okt_A OSB synthetase, O-succi 25.8 66 0.0023 27.7 4.3 86 68-160 191-277 (342)
150 2xi8_A Putative transcription 25.7 26 0.0009 21.3 1.3 19 208-226 6-24 (66)
151 1y14_A B32, RPB4, DNA-directed 25.5 2E+02 0.0069 22.5 6.6 58 207-276 128-185 (187)
152 4dwd_A Mandelate racemase/muco 25.3 1.8E+02 0.0062 25.5 7.2 68 87-156 231-300 (393)
153 2kpj_A SOS-response transcript 25.3 41 0.0014 22.5 2.4 53 205-257 11-63 (94)
154 3mkc_A Racemase; metabolic pro 25.1 2.4E+02 0.0081 24.7 7.9 69 87-156 246-316 (394)
155 1aj0_A DHPS, dihydropteroate s 25.1 3E+02 0.01 23.0 10.5 101 47-156 35-141 (282)
156 1nsj_A PRAI, phosphoribosyl an 25.0 1.2E+02 0.0039 24.2 5.3 80 32-129 4-84 (205)
157 2ozt_A TLR1174 protein; struct 24.8 3.2E+02 0.011 23.1 10.3 104 46-160 171-277 (332)
158 3tj4_A Mandelate racemase; eno 24.7 3.4E+02 0.012 23.4 9.5 83 67-155 222-306 (372)
159 2w6k_A COBE; biosynthetic prot 24.3 1.2E+02 0.0039 22.8 4.9 51 106-156 21-76 (145)
160 3g5g_A Regulatory protein; tra 24.3 51 0.0017 22.6 2.7 55 203-257 28-82 (99)
161 3ddm_A Putative mandelate race 23.7 3.6E+02 0.012 23.5 8.8 68 87-155 240-309 (392)
162 2wiu_B HTH-type transcriptiona 23.6 43 0.0015 21.8 2.2 52 205-256 14-65 (88)
163 1x57_A Endothelial differentia 23.6 56 0.0019 21.6 2.8 22 206-227 16-37 (91)
164 3eez_A Putative mandelate race 23.6 1.7E+02 0.006 25.4 6.7 73 87-160 226-300 (378)
165 2dqw_A Dihydropteroate synthas 23.0 3.4E+02 0.012 22.8 9.1 100 48-156 50-154 (294)
166 4h3d_A 3-dehydroquinate dehydr 23.0 3.1E+02 0.011 22.4 12.6 59 37-103 86-144 (258)
167 3v7e_A Ribosome-associated pro 22.9 1.6E+02 0.0053 19.4 4.9 57 90-155 3-60 (82)
168 1qwg_A PSL synthase;, (2R)-pho 22.7 3.2E+02 0.011 22.5 8.1 97 54-153 26-132 (251)
169 2o7s_A DHQ-SDH PR, bifunctiona 22.6 4.1E+02 0.014 24.1 9.3 68 38-107 67-159 (523)
170 2al1_A Enolase 1, 2-phospho-D- 22.6 4.1E+02 0.014 23.7 9.8 97 47-154 273-372 (436)
171 2hzg_A Mandelate racemase/muco 22.5 3.3E+02 0.011 23.7 8.4 71 87-159 235-308 (401)
172 2r6o_A Putative diguanylate cy 22.4 2.4E+02 0.0082 23.5 7.1 100 50-155 129-240 (294)
173 3mz2_A Glycerophosphoryl diest 22.4 1.4E+02 0.0047 25.1 5.6 67 90-156 148-236 (292)
174 2hxt_A L-fuconate dehydratase; 22.1 3.9E+02 0.013 23.6 8.9 67 87-154 282-351 (441)
175 2keb_A DNA polymerase subunit 22.0 1.9E+02 0.0066 20.1 5.1 26 203-228 45-70 (101)
176 1nq6_A XYS1; glycoside hydrola 21.8 3.5E+02 0.012 22.5 8.2 67 90-157 4-83 (302)
177 4e38_A Keto-hydroxyglutarate-a 21.7 3.2E+02 0.011 22.1 7.8 57 88-153 74-132 (232)
178 3mqt_A Mandelate racemase/muco 21.7 2.5E+02 0.0087 24.5 7.4 69 87-156 241-311 (394)
179 3noy_A 4-hydroxy-3-methylbut-2 21.6 2.6E+02 0.009 24.4 7.1 93 47-153 43-138 (366)
180 2ef8_A C.ECOT38IS, putative tr 21.6 94 0.0032 19.8 3.6 52 204-255 11-62 (84)
181 3ri6_A O-acetylhomoserine sulf 21.6 4.1E+02 0.014 23.3 9.8 59 104-162 152-211 (430)
182 1rij_A E6APN1 peptide; Trp-CAG 21.5 50 0.0017 16.3 1.5 10 12-21 3-12 (26)
183 3v5c_A Mandelate racemase/muco 21.4 2.9E+02 0.0099 24.1 7.7 80 67-156 226-313 (392)
184 2p0o_A Hypothetical protein DU 21.3 4.2E+02 0.014 23.2 9.6 94 58-158 73-181 (372)
185 3lkv_A Uncharacterized conserv 21.2 2.5E+02 0.0086 23.1 7.1 110 52-164 126-238 (302)
186 4dxk_A Mandelate racemase / mu 21.0 2.2E+02 0.0076 25.0 6.9 68 88-156 251-320 (400)
187 2jwk_A Protein TOLR; periplasm 21.0 74 0.0025 20.1 2.9 47 47-98 27-73 (74)
188 4dye_A Isomerase; enolase fami 21.0 2E+02 0.0067 25.4 6.5 71 87-158 250-322 (398)
189 3omt_A Uncharacterized protein 20.9 38 0.0013 21.3 1.4 21 206-226 11-31 (73)
190 2c4w_A 3-dehydroquinate dehydr 20.9 2.8E+02 0.0097 21.4 6.4 80 46-134 33-117 (176)
191 3p3b_A Mandelate racemase/muco 20.7 2.3E+02 0.0079 24.7 6.9 83 68-160 227-316 (392)
192 3bs3_A Putative DNA-binding pr 20.6 43 0.0015 21.0 1.6 21 206-226 13-33 (76)
193 1lmb_3 Protein (lambda repress 20.6 76 0.0026 20.8 3.0 52 206-257 20-71 (92)
194 4a35_A Mitochondrial enolase s 20.4 4E+02 0.014 23.7 8.5 82 68-155 271-357 (441)
195 2hk0_A D-psicose 3-epimerase; 20.4 1.2E+02 0.0042 25.1 4.9 55 101-157 22-88 (309)
196 2oz8_A MLL7089 protein; struct 20.3 4.2E+02 0.014 22.9 10.2 98 46-157 200-300 (389)
197 3l12_A Putative glycerophospho 20.3 2.5E+02 0.0086 23.5 6.9 33 85-117 165-198 (313)
198 3qhx_A Cystathionine gamma-syn 20.1 4.1E+02 0.014 22.7 9.3 55 107-161 139-194 (392)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=3.2e-54 Score=384.14 Aligned_cols=257 Identities=20% Similarity=0.329 Sum_probs=211.0
Q ss_pred CCEeeCCC----CchHHHHHHHHhhhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecC
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 76 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~ 76 (290)
||+||||+ |.||++||+||++.+|++. ++.+|+...........+++++.+++++++||+||||||||+|++|||
T Consensus 49 i~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~-~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p 127 (312)
T 1pyf_A 49 VTMLDTAYIYGIGRSEELIGEVLREFNREDV-VIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFP 127 (312)
T ss_dssp CCEEECCTTTTTTHHHHHHHHHHTTSCGGGC-EEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSC
T ss_pred CCEEECccccCCCchHHHHHHHhhhcCCCeE-EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 79999999 4799999999987556644 455554321100000135789999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 77 DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 77 ~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+...+ ++++|++|++|+++||||+||||||+.++++++++. .+|+++|++||++++..+.+++++|+++||++++|+|
T Consensus 128 ~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~sp 205 (312)
T 1pyf_A 128 DEHTP-KDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD-GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFP 205 (312)
T ss_dssp CSSSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTT-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEEST
T ss_pred CCCCC-HHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhh-CCceEEeccCCccccchHHHHHHHHHHcCCeEEEecc
Confidence 98776 899999999999999999999999999999999874 4799999999999998877899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccC--CchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCce
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWG--GWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~ 234 (290)
|++|+|++++.... ..+..+.+ ....+|. ..+......+.+.++|+++|+|++|+||+|++++|.++
T Consensus 206 L~~G~L~~~~~~~~-~~~~~~~r----------~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~ 274 (312)
T 1pyf_A 206 LVSGLLAGKYTEDT-TFPEGDLR----------NEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEID 274 (312)
T ss_dssp TTTTGGGTCCCTTC-CCCTTCGG----------GGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCC
T ss_pred cccccccCCCCCCC-CCCCcccc----------cccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCe
Confidence 99999999875432 11111111 1111111 11334556789999999999999999999999999999
Q ss_pred eeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhh
Q 022889 235 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 235 ~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~ 273 (290)
++|+|+++ ++||++|+++++++||+++++.|++++..
T Consensus 275 ~~I~g~~~--~~~l~en~~a~~~~L~~~~~~~l~~~~~~ 311 (312)
T 1pyf_A 275 ILIPGAKR--ADQLIDNIKTADVTLSQEDISFIDKLFAP 311 (312)
T ss_dssp CBCCCCSS--HHHHHHHHGGGGCCCCHHHHHHHHHHTCC
T ss_pred EEEeCCCC--HHHHHHHHhhccCCCCHHHHHHHHHHhcC
Confidence 99999999 99999999999999999999999998753
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=8.5e-54 Score=386.49 Aligned_cols=258 Identities=21% Similarity=0.383 Sum_probs=214.1
Q ss_pred CCEeeCCC----CchHHHHHHHHhhhhcCCCCceeeeeeecc--ccC---CCCCCCCHHHHHHHHHHHHHhhCCCcccEE
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGLT--KWV---PPPVKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~--k~~---~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~ 71 (290)
||+||||+ |.||++||++|++ +|++. +|.+|+.... ... +...+++++.|++++++||+||||||||+|
T Consensus 66 i~~~DTA~~Yg~G~sE~~lG~al~~-~R~~v-~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~ 143 (348)
T 3n2t_A 66 INLIDTAPVYGFGHSEEIVGRALAE-KPNKA-HVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLE 143 (348)
T ss_dssp CCEEECCTTGGGGHHHHHHHHHHHH-SCCCC-EEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred CCEEEChhhcCCChHHHHHHHHHhh-CCCeE-EEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 79999999 4799999999997 67655 5555543221 000 111247899999999999999999999999
Q ss_pred EeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCce
Q 022889 72 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 151 (290)
Q Consensus 72 ~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v 151 (290)
+||||+...+ ++++|++|++|+++||||+||||||+.++++++++.. +|+++|++||++++..+.+++++|+++||++
T Consensus 144 ~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~-~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v 221 (348)
T 3n2t_A 144 QIHWPDDKTP-IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA-PLATIQPPLNLFERTIEKDILPYAEKHNAVV 221 (348)
T ss_dssp EESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS-CCCEEECBCBTTBCGGGGTHHHHHHHHTCEE
T ss_pred EecCCCCCCC-HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC-CccEEEeeecCccCchHHHHHHHHHHcCCeE
Confidence 9999998877 8999999999999999999999999999999999855 7999999999999988889999999999999
Q ss_pred eeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022889 152 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 231 (290)
Q Consensus 152 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~ 231 (290)
++|+||++|+|++++.... ..+.++.+...+ .+ .....+...+.++.+.++|+++|+|++|+||+|++++
T Consensus 222 ~a~spL~~G~Ltg~~~~~~-~~~~~~~r~~~~---~~-----~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~- 291 (348)
T 3n2t_A 222 LAYGALCRGLLTGKMNRDT-TFPKDDLRSNDP---KF-----QKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQ- 291 (348)
T ss_dssp EEBCTTGGGGGGTCCCTTC-CCCTTSGGGGCG---GG-----STTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTT-
T ss_pred EEeecccCccccCCccCCC-CCCCcchhhccc---cc-----chhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHC-
Confidence 9999999999999987543 111111110000 00 0011244566788999999999999999999999999
Q ss_pred CceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 232 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 232 ~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
.++++|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 292 ~v~~~I~g~~~--~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 332 (348)
T 3n2t_A 292 GPVIALWGARK--PGQVSGVKDVFGWSLTDEEKKAVDDILARH 332 (348)
T ss_dssp TTEEEEEECSS--GGGGTTHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEeCCCC--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Confidence 78899999999 999999999999999999999999999875
No 3
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=7.5e-53 Score=380.99 Aligned_cols=258 Identities=20% Similarity=0.298 Sum_probs=207.1
Q ss_pred CCEeeCCC--C----chHHHHHHHHhh-h--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEE
Q 022889 1 MGSFDFVD--G----PAEDLYGIFINR-V--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 1 In~~DTA~--g----~sE~~lG~~l~~-~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~ 71 (290)
||+||||+ | .||++||++|++ . .|++. +|.+|+.......+.....+++.+++++++||+||||||||+|
T Consensus 78 i~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v-~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~ 156 (353)
T 3erp_A 78 ITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDEL-IISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIF 156 (353)
T ss_dssp CCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGC-EEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeE-EEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEE
Confidence 79999999 4 489999999985 2 26644 4444432221111111234899999999999999999999999
Q ss_pred EeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cCCCeeEecccccccCCCcchHHHHHHHHh
Q 022889 72 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NGIPVVSNQVQHSVVDMRPQQKMAELCQLT 147 (290)
Q Consensus 72 ~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~ 147 (290)
+||||+...+ ++++|++|++|+++||||+||||||+.++++++.+ .+++|+++|++||++++..+.+++++|+++
T Consensus 157 ~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~ 235 (353)
T 3erp_A 157 YHHRPDPETP-LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEK 235 (353)
T ss_dssp EECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHH
T ss_pred EecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHc
Confidence 9999998877 89999999999999999999999999999988765 257899999999999998888899999999
Q ss_pred CCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHH
Q 022889 148 GVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYI 227 (290)
Q Consensus 148 gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~ 227 (290)
||++++|+||++|+|++++... .|.+. +.... .. .+... ...+...+.++.+.++|+++|+|++|+||+|+
T Consensus 236 gI~v~a~spL~~G~Ltg~~~~~---~p~~~-r~~~~-~~---~~~~~-~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~ 306 (353)
T 3erp_A 236 GVGSIAFSPLAGGQLTDRYLNG---IPEDS-RAASG-SR---FLKPE-QITADKLEKVRRLNELAARRGQKLSQMALAWV 306 (353)
T ss_dssp TCEEEEBSTTGGGTSSGGGTC----------------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCeEEEeccccccccCCCccCC---CCCcc-ccccc-cc---ccccc-cccHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999998753 22111 11100 00 00000 01123567778999999999999999999999
Q ss_pred hhCCCceeeeecccCCcHHHHHHhhhhh-cCCCCHHHHHHHHHHH
Q 022889 228 LDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVT 271 (290)
Q Consensus 228 l~~~~v~~~l~g~~~~~~~~l~enl~a~-~~~L~~e~~~~l~~~~ 271 (290)
+++|.|+++|+|+++ ++||++|++++ +++||+++++.|+++.
T Consensus 307 l~~~~v~~vI~G~~~--~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 307 LRNDNVTSVLIGASK--PSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp TTTSCCCEEEECCSS--HHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred HhCCCCcEEEeCCCC--HHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 999999999999999 99999999999 8899999999999987
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=3e-53 Score=380.85 Aligned_cols=260 Identities=20% Similarity=0.305 Sum_probs=213.7
Q ss_pred CCEeeCCC----CchHHHHHHHHhhh-hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeec
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRV-RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 75 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~-~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~ 75 (290)
||+||||+ |.||++||++|++. +|++. +|.+|+.......+...+.+++.+++++++||+||||||||+|+|||
T Consensus 48 i~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~-~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~ 126 (333)
T 1pz1_A 48 ITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV-ILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHW 126 (333)
T ss_dssp CCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC-EEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECS
T ss_pred CCeEECccccCCCchHHHHHHHHhcCCCcCeE-EEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecC
Confidence 79999999 47999999999875 46544 44444431111011011458999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 76 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 76 ~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
|+...+ ++++|++|++|+++||||+||||||+.++++++++. .+|+++|++||++++..+.+++++|+++||++++|+
T Consensus 127 p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~s 204 (333)
T 1pz1_A 127 PDPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV-APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYG 204 (333)
T ss_dssp CCTTSC-HHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT-SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBC
T ss_pred CCCCCC-HHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc-CCcEEEeccccCccCchHHHHHHHHHHcCceEEEee
Confidence 998776 899999999999999999999999999999999985 689999999999999887899999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCC-CHHHHHHHHHhhCCCce
Q 022889 156 TVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV-SIPVVAVRYILDQPAVA 234 (290)
Q Consensus 156 pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~-s~~q~al~~~l~~~~v~ 234 (290)
||++|+|++++...... +.++.+...+ .+. ...+....+.++.+.++|+++|+ |++|+||+|++++|.++
T Consensus 205 pL~~G~Ltg~~~~~~~~-~~~~~r~~~~---~~~-----~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~ 275 (333)
T 1pz1_A 205 SLCRGLLTGKMTEEYTF-EGDDLRNHDP---KFQ-----KPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGAD 275 (333)
T ss_dssp TTGGGTTSSCCCTTCCC-CTTCGGGSCG---GGS-----TTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCC
T ss_pred cccCCccCCCccccccC-CCcccccccc---ccc-----hhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCe
Confidence 99999999987643211 1111110000 000 01234566778999999999999 99999999999999999
Q ss_pred eeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 235 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 235 ~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
++|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 276 ~vI~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 313 (333)
T 1pz1_A 276 IALWGARK--PGQLEALSEITGWTLNSEDQKDINTILENT 313 (333)
T ss_dssp EEEEECCS--GGGGTTCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHHhhc
Confidence 99999999 999999999999999999999999999765
No 5
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=2e-53 Score=381.38 Aligned_cols=262 Identities=18% Similarity=0.262 Sum_probs=210.7
Q ss_pred CCEeeCCC----CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ |.||++||++|++. +|++. +|.+|+.... ..+...+++++.+++++++||+||||||||+|++|
T Consensus 47 i~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v-~I~TK~~~~~-~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH 124 (327)
T 3eau_A 47 INLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSL-VITTKIFWGG-KAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN 124 (327)
T ss_dssp CCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGC-EEEEEESBCC-SSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEES
T ss_pred CCEEECccccCCCChHHHHHHHHHhcCCccCeE-EEEEeecCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEe
Confidence 79999999 67999999999975 45544 4444432111 11122357899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cC-CCeeEecccccccCCCc-chHHHHHHHHhC
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPVVSNQVQHSVVDMRP-QQKMAELCQLTG 148 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~-~~~~~~q~~~n~~~~~~-~~~~~~~~~~~g 148 (290)
||+...+ ++++|++|++|+++||||+||||||+.+++.++.. .+ ++++++|++||++++.. +.+++++|+++|
T Consensus 125 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~g 203 (327)
T 3eau_A 125 RPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIG 203 (327)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHC
T ss_pred CCCCCCC-HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcC
Confidence 9998877 89999999999999999999999999999988865 23 58999999999998863 457999999999
Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccC--CchhHHHHHHHHHHHHHHhCCCHHHHHHHH
Q 022889 149 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWG--GWSQFQVLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 149 i~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~la~~~~~s~~q~al~~ 226 (290)
|++++|+||++|+|++++.... |.+ .+.... .+.....++. .........+.++++|+++|+|++|+||+|
T Consensus 204 i~v~a~spL~~G~Ltg~~~~~~---~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w 276 (327)
T 3eau_A 204 VGAMTWSPLACGIVSGKYDSGI---PPY-SRASLK---GYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAW 276 (327)
T ss_dssp CEEEEECTTGGGGGGTTTTTSC---CTT-SGGGST---TCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CeEEEeccccCceecCcccCCC---CCC-cccccc---cccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 9999999999999999987532 211 111110 0111111111 112345667899999999999999999999
Q ss_pred HhhCCCceeeeecccCCcHHHHHHhhhhhcC--CCCHHHHHHHHHHHhhC
Q 022889 227 ILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 227 ~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~--~L~~e~~~~l~~~~~~~ 274 (290)
++++|.+.++|+|+++ ++||++|++++++ +||+++++.|+++..+.
T Consensus 277 ~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~~ 324 (327)
T 3eau_A 277 CLRNEGVSSVLLGASN--AEQLMENIGAIQVLPKLSSSIVHEIDSILGNK 324 (327)
T ss_dssp HHSSTTCCEEEECCSS--HHHHHHHHGGGGGGGGCCHHHHHHHHHHHCCC
T ss_pred HHhCCCCceEEeCCCC--HHHHHHHHHHhccCCCCCHHHHHHHHHHhhcc
Confidence 9999999999999999 9999999999998 99999999999998753
No 6
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=1e-52 Score=379.48 Aligned_cols=265 Identities=20% Similarity=0.308 Sum_probs=207.4
Q ss_pred CCEeeCCC--C----chHHHHHHHHhhh--h-cCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEE
Q 022889 1 MGSFDFVD--G----PAEDLYGIFINRV--R-RERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 1 In~~DTA~--g----~sE~~lG~~l~~~--~-r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~ 71 (290)
||+||||+ | .||++||++|++. + |++. +|.+|+.......+.....+++.|++++++||+||||||||+|
T Consensus 57 i~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~-~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~ 135 (346)
T 3n6q_A 57 ITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDEL-IISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIF 135 (346)
T ss_dssp CCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGC-EEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCEEECccccCCCCCcHHHHHHHHHHhhcccccccE-EEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEE
Confidence 79999999 5 4899999999873 2 5543 3444432211111111234899999999999999999999999
Q ss_pred EeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cCCCeeEecccccccCCCcch-HHHHHHHH
Q 022889 72 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NGIPVVSNQVQHSVVDMRPQQ-KMAELCQL 146 (290)
Q Consensus 72 ~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~~~~~~~q~~~n~~~~~~~~-~~~~~~~~ 146 (290)
+||||+...+ ++++|++|++|+++||||+||||||+.++++++.+ .+.+++++|++||++++..+. +++++|++
T Consensus 136 ~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~ 214 (346)
T 3n6q_A 136 YSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQN 214 (346)
T ss_dssp EECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHH
T ss_pred EEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHH
Confidence 9999998777 89999999999999999999999999999987654 357899999999999988766 89999999
Q ss_pred hCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHH
Q 022889 147 TGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 147 ~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~ 226 (290)
+||++++|+||++|+|++++.... |.+ .+...+. ..+..+...+ ..+.+.+.++.+.++|+++|+|++|+||+|
T Consensus 215 ~gi~v~a~spL~~G~L~g~~~~~~---~~~-~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w 288 (346)
T 3n6q_A 215 NGVGCIAFTPLAQGLLTGKYLNGI---PQD-SRMHREG-NKVRGLTPKM-LTEANLNSLRLLNEMAQQRGQSMAQMALSW 288 (346)
T ss_dssp HTCEEEEBSTTGGGGGGTSCC-----------------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cCCeEEEeccccCeecCCCccCCC---CCc-ccccccc-ccccccchhh-hhHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 999999999999999999986531 211 1111000 0000000000 113456777899999999999999999999
Q ss_pred HhhCCCceeeeecccCCcHHHHHHhhhhh-cCCCCHHHHHHHHHHHhhCC
Q 022889 227 ILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 227 ~l~~~~v~~~l~g~~~~~~~~l~enl~a~-~~~L~~e~~~~l~~~~~~~~ 275 (290)
++++|.++++|+|+++ ++||++|++++ +++||+|+++.|+++.....
T Consensus 289 ~l~~~~v~~~I~g~~~--~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~~~ 336 (346)
T 3n6q_A 289 LLKDDRVTSVLIGASR--AEQLEENVQALNNLTFSTKELAQIDQHIADGE 336 (346)
T ss_dssp HTSSTTCSEEEECCSS--HHHHHHHHGGGGCCCCCHHHHHHHHHHHHHTT
T ss_pred HHhCCCCcEEEcCCCC--HHHHHHHHhhccCCCCCHHHHHHHHHHHhccC
Confidence 9999999999999999 99999999998 68999999999999997644
No 7
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=9.5e-53 Score=376.98 Aligned_cols=270 Identities=17% Similarity=0.245 Sum_probs=215.9
Q ss_pred CCEeeCCC----CchHHHHHHHHhhhh--cCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRVR--RERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~~--r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ |.||++||++|++.+ |++. +|.+|+ ... .+.+++++.+++++++||+||||||||+|+||
T Consensus 36 i~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~-~i~TK~-~~~----~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH 109 (327)
T 1gve_A 36 HTEIDTAFVYANGQSETILGDLGLGLGRSGCKV-KIATKA-APM----FGKTLKPADVRFQLETSLKRLQCPRVDLFYLH 109 (327)
T ss_dssp CCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCS-EEEEEE-CSC----TTCCSSHHHHHHHHHHHHHHTTCSCEEEEEEC
T ss_pred CCEEEchhhcCCCchHHHHHHHHhhcCCCCCeE-EEEEEE-CCC----CCCCCCHHHHHHHHHHHHHHHCCCeEeEEEec
Confidence 79999999 589999999997532 3322 333333 211 11257899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cC-CCeeEecccccccCCCcchHHHHHHHHhCC
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGV 149 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 149 (290)
||+...+ ++++|++|++|+++||||+||||||+.++++++.+ .+ ++|+++|++||++++..+.+++++|+++||
T Consensus 110 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi 188 (327)
T 1gve_A 110 FPDHGTP-IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGL 188 (327)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTC
T ss_pred CCCCCCC-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCC
Confidence 9998776 89999999999999999999999999999988765 23 579999999999999877899999999999
Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCCCCch-hhHhhhhhhccCCchhHHHHHHHHHHHHHH----hCCCHHHHHH
Q 022889 150 KLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPS-LQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAV 224 (290)
Q Consensus 150 ~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~~~s~~q~al 224 (290)
++++|+||++|+|++++..........+.++.... ...+ ..++.. +...+..+.+.++|++ +|+|++|+||
T Consensus 189 ~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL 264 (327)
T 1gve_A 189 RFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLY---MDRYWK-EEHFNGIALVEKALKTTYGPTAPSMISAAV 264 (327)
T ss_dssp EEEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHH---HHHHCS-HHHHHHHHHHHHHHHHHHCTTCCCHHHHHH
T ss_pred eEEEecccccccccCcccCCCccccCCCccccccccchhh---hhcccC-hHHHHHHHHHHHHHHhhccccCCCHHHHHH
Confidence 99999999999999987543210000112222110 1111 111111 2345667899999999 9999999999
Q ss_pred HHHhhCCCc-----eeeeecccCCcHHHHHHhhhhhcC-CCCHHHHHHHHHHHhhCCCCCCccCCcccccc
Q 022889 225 RYILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKGKDLLGVIGDCGDEYR 289 (290)
Q Consensus 225 ~~~l~~~~v-----~~~l~g~~~~~~~~l~enl~a~~~-~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (290)
+|++++|.+ .++|+|+++ ++||++|+++++. +||+++++.|+++....+ ++|+++|+
T Consensus 265 ~w~l~~~~v~~~~g~~~I~g~~~--~~~l~en~~a~~~~~L~~e~~~~l~~~~~~~~------~~~~~~~~ 327 (327)
T 1gve_A 265 RWMYHHSQLKGTQGDAVILGMSS--LEQLEQNLALVEEGPLEPAVVDAFDQAWNLVA------HECPNYFR 327 (327)
T ss_dssp HHHHHTSSCCGGGTCEEEECCSS--HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHG------GGCCCSCC
T ss_pred HHHHhCCCccccCCCeEEECCCC--HHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcc------CCCccccC
Confidence 999999998 789999999 9999999999987 899999999999998744 47888885
No 8
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-53 Score=385.19 Aligned_cols=270 Identities=19% Similarity=0.272 Sum_probs=211.5
Q ss_pred CCEeeCCC----CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ |.||++||++|++. +|++. +|.+|+.... ......+++++.|++++++||+|||+||||||+||
T Consensus 81 i~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v-~I~TK~~~~~-~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH 158 (367)
T 3lut_A 81 INLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSL-VITTKIFWGG-KAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN 158 (367)
T ss_dssp CCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGC-EEEEEESBCC-SSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEES
T ss_pred CCEEECccccCCCchHHHHHHHHHhCCCCCceE-EEEeccccCC-CCccCCCCCHHHHHHHHHHHHHHhCCCccceEEec
Confidence 79999999 67999999999975 35544 4444432111 11112357899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cC-CCeeEecccccccCCCc-chHHHHHHHHhC
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPVVSNQVQHSVVDMRP-QQKMAELCQLTG 148 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~-~~~~~~q~~~n~~~~~~-~~~~~~~~~~~g 148 (290)
||+...+ ++++|++|++|+++||||+||||||+.+++.++.. .+ ++|+++|++||++++.. +.+++++|+++|
T Consensus 159 ~pd~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~g 237 (367)
T 3lut_A 159 RPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIG 237 (367)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHC
T ss_pred CCCCCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcC
Confidence 9998776 89999999999999999999999999999988765 22 68999999999998876 558999999999
Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCC--chhHHHHHHHHHHHHHHhCCCHHHHHHHH
Q 022889 149 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGG--WSQFQVLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 149 i~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~la~~~~~s~~q~al~~ 226 (290)
|++++|+||++|+|+|++.... |.. .+... ..+..+..++.. ........+.+.++|+++|+|++|+||+|
T Consensus 238 i~v~a~spL~~G~Ltgk~~~~~---~~~-~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w 310 (367)
T 3lut_A 238 VGAMTWSPLACGIVSGKYDSGI---PPY-SRASL---KGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAW 310 (367)
T ss_dssp CEEEEECTTGGGGGGTTTTTSC---CTT-SGGGS---TTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred CeEEEecccccccccCCcCCCC---CCc-ccccc---cccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999999999987532 111 11100 000000011111 11234567899999999999999999999
Q ss_pred HhhCCCceeeeecccCCcHHHHHHhhhhhcC--CCCHHHHHHHHHHHhhCCCCCCccCCcccccc
Q 022889 227 ILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKKGKDLLGVIGDCGDEYR 289 (290)
Q Consensus 227 ~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~--~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (290)
++++|.+.++|+|+++ ++||++|++++++ +||+|+++.|+++..+.+ .+.+.||
T Consensus 311 ~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~-------~~~~~~~ 366 (367)
T 3lut_A 311 CLRNEGVSSVLLGASN--AEQLMENIGAIQVLPKLSSSIVHEIDSILGNKP-------YSKKDYR 366 (367)
T ss_dssp HHTSTTEEEEEECCSS--HHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCC-------CC-----
T ss_pred HHhCCCCcEEecCCCC--HHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCC-------CcccccC
Confidence 9999999999999999 9999999999986 899999999999998765 3555555
No 9
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.6e-53 Score=383.18 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=204.4
Q ss_pred CCEeeCCC--C---chHHHHHHHHhhhhcCCCCceeeeeeecccc-CCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD--G---PAEDLYGIFINRVRRERPPEFLDKVRGLTKW-VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~--g---~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~-~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ | .||++||++|++.+|++. ++.+|+...... .+...+.+++.+++++++||+|||+||||+|++|
T Consensus 48 i~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~-~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH 126 (337)
T 3v0s_A 48 ITFFDTSDIYGENGSNEELLGKALKQLPREXI-QVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIH 126 (337)
T ss_dssp CCEEECCTTSSSTTHHHHHHHHHHTTSCGGGC-EEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEES
T ss_pred CCEEEChhhhCCCCcHHHHHHHHHhhcCCcce-EEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEec
Confidence 79999999 5 599999999987556644 444444332110 1112356899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeee
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
||+...+ ++++|++|++|+++||||+||||||+.++++++.+. .+++++|++||++++..+.+++++|+++||++++|
T Consensus 127 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~ 204 (337)
T 3v0s_A 127 RIDTTVP-IEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAV-HPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPY 204 (337)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEE
T ss_pred CCCCCCC-HHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhcc-CCceEEEeeccccccchhHHHHHHHHHcCceEEEe
Confidence 9998877 899999999999999999999999999999999874 47899999999999988789999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhcc--CCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCC
Q 022889 155 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAW--GGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 232 (290)
Q Consensus 155 spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~ 232 (290)
+||++|+|+|+.... ..+.++.+... .+| ...+.....++.+.++|+++|+|++|+||+|++++|.
T Consensus 205 spL~~G~L~g~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~ 272 (337)
T 3v0s_A 205 SPIGRGLFWGKAIKE--SLPENSVLTSH----------PRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGE 272 (337)
T ss_dssp STTHHHHHHHHHHHC-------------------------------------CHHHHHHHHHTTSCHHHHHHHHHHTTCT
T ss_pred ccccCcccCCCCCCC--CCCCcchhhcc----------cccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Confidence 999999999873211 11111111000 011 1123344556899999999999999999999999999
Q ss_pred ceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 233 VAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 233 v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
+.++|+|+++ ++||++|+++++++||+++++.|++++...
T Consensus 273 v~~~I~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 312 (337)
T 3v0s_A 273 DVVPIPGTTK--IKNLHNNVGALKVXLTKEDLKEISDAVPLD 312 (337)
T ss_dssp TBCCCCCCSC--HHHHHHHHHGGGCCCCHHHHHHHHHTCC--
T ss_pred CeEEEcCCCC--HHHHHHHHHHhccCCCHHHHHHHHHhhccc
Confidence 9999999999 999999999999999999999999998654
No 10
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=6.4e-52 Score=374.47 Aligned_cols=259 Identities=23% Similarity=0.357 Sum_probs=209.8
Q ss_pred CCEeeCCC--C---------chHHHHHHHHhhh-hcCCCCceeeeeeeccc----cCCCCCCCCHHHHHHHHHHHHHhhC
Q 022889 1 MGSFDFVD--G---------PAEDLYGIFINRV-RRERPPEFLDKVRGLTK----WVPPPVKMTSSIVRESIDVSRRRMD 64 (290)
Q Consensus 1 In~~DTA~--g---------~sE~~lG~~l~~~-~r~~~~~~~~~~~~~~k----~~~~~~~~~~~~i~~~~e~SL~~L~ 64 (290)
||+||||+ | .||++||+||++. +|++. +|.+|+..... +.....+++++.+++++++||+|||
T Consensus 44 i~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~~~-~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~ 122 (346)
T 1lqa_A 44 INLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKL-IIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQ 122 (346)
T ss_dssp CCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGGGC-EEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHT
T ss_pred CCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCceE-EEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhC
Confidence 79999999 4 7999999999874 46644 44444432210 1111135789999999999999999
Q ss_pred CCcccEEEeecCC---------------C--CCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cC-CCe
Q 022889 65 VPCLDMLQFHWWD---------------Y--SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPV 122 (290)
Q Consensus 65 ~d~iDl~~lH~~~---------------~--~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~-~~~ 122 (290)
|||||+|+||||. . ..+ ++++|++|++|+++||||+||||||+.++++++.+ .+ .+|
T Consensus 123 ~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~ 201 (346)
T 1lqa_A 123 TDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS-LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRI 201 (346)
T ss_dssp SSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCC
T ss_pred CCceeEEEecCccccccccccccccccccccCCC-HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCc
Confidence 9999999999993 2 233 79999999999999999999999999988877654 24 479
Q ss_pred eEecccccccCCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhcc--CCchh
Q 022889 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAW--GGWSQ 200 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 200 (290)
+++|++||++++..+.+++++|+++||++++|+||++|+|++++.... .|.++ + .. ....+ ...+.
T Consensus 202 ~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~--~p~~~-~-----~~----~~~~~~~~~~~~ 269 (346)
T 1lqa_A 202 VTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGA--KPAGA-R-----NT----LFSRFTRYSGEQ 269 (346)
T ss_dssp CEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGGGC--CCTTC-H-----HH----HCTTCCTTCSHH
T ss_pred eEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcccccc--CCCcc-h-----hh----cchhhcccccHH
Confidence 999999999999877899999999999999999999999999876421 11111 0 00 00011 12244
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 201 FQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 201 ~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
..+.++.+.++|+++|+|++|+||+|++++|.|+++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 270 ~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~--~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 342 (346)
T 1lqa_A 270 TQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATT--MDQLKTNIESLHLELSEDVLAEIEAVHQVYT 342 (346)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCSS--HHHHHHHHGGGGCCCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHHhccCCCCHHHHHHHHHHHhhcc
Confidence 567788999999999999999999999999999999999999 9999999999999999999999999998755
No 11
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=4.4e-52 Score=376.77 Aligned_cols=271 Identities=17% Similarity=0.224 Sum_probs=214.3
Q ss_pred CCEeeCCC----CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ |.||++||++|++. .+++. +|.+|+ ... ...+++++.+++++++||+||||||||+|+||
T Consensus 69 in~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v-~I~TK~-~~~----~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH 142 (360)
T 2bp1_A 69 HTELDTAFMYSDGQSETILGGLGLGLGGGDCRV-KIATKA-NPW----DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLH 142 (360)
T ss_dssp CCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCC-EEEEEE-CCC----TTCCSSHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred CCEEECccccCCCChHHHHHHHHhhccCCCCeE-EEEeee-cCC----CCCCCCHHHHHHHHHHHHHHhCCCeEeEEEec
Confidence 79999999 58999999999732 12223 333333 211 11257899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH----cC-CCeeEecccccccCCCcchHHHHHHHHhCC
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGV 149 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~----~~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 149 (290)
||+...+ ++++|++|++|+++||||+||||||+.++++++.+ .+ ++|+++|++||++++..+.+++++|+++||
T Consensus 143 ~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi 221 (360)
T 2bp1_A 143 APDHGTP-VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGL 221 (360)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTC
T ss_pred CCCCCCC-HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCC
Confidence 9998776 89999999999999999999999999999988765 23 579999999999998877899999999999
Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHH----hCCCHHHHHHH
Q 022889 150 KLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVR 225 (290)
Q Consensus 150 ~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~~~s~~q~al~ 225 (290)
++++|+||++|+|++++..........+.++..... ...+..++.. +...+..+.++++|++ +|+|++|+||+
T Consensus 222 ~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~ 298 (360)
T 2bp1_A 222 RFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSW--AETYRNRFWK-EHHFEAIALVEKALQAAYGASAPSVTSAALR 298 (360)
T ss_dssp EEEEECTTGGGGGGTCCCGGGGTTTCCSBTTBSSTT--HHHHHHHHCC-HHHHHHHHHHHHHHHHHHGGGCCCHHHHHHH
T ss_pred eEEEecccccCcccCCccCcCccccccccccccccc--chhhhhcccc-hhHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Confidence 999999999999999876432110001112211100 0011111111 2344567899999999 99999999999
Q ss_pred HHhhCCCc-----eeeeecccCCcHHHHHHhhhhhcC-CCCHHHHHHHHHHHhhCCCCCCccCCcccccc
Q 022889 226 YILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKGKDLLGVIGDCGDEYR 289 (290)
Q Consensus 226 ~~l~~~~v-----~~~l~g~~~~~~~~l~enl~a~~~-~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (290)
|++++|.+ .++|+|+++ ++||++|+++++. +|++++++.|+++....+ ++|+++|+
T Consensus 299 w~l~~~~v~~~~g~~vI~G~~~--~~~l~enl~a~~~~~L~~e~~~~l~~~~~~~~------~~~~~~~~ 360 (360)
T 2bp1_A 299 WMYHHSQLQGAHGDAVILGMSS--LEQLEQNLAATEEGPLEPAVVDAFNQAWHLVA------HECPNYFR 360 (360)
T ss_dssp HHHHHSSCCGGGTCEEEECCSS--HHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHG------GGCCCSCC
T ss_pred HHHhCCcccccCCCeEEECCCC--HHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcc------CCcccccC
Confidence 99999988 789999999 9999999999987 899999999999998754 36777764
No 12
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=3.6e-51 Score=364.90 Aligned_cols=237 Identities=19% Similarity=0.205 Sum_probs=202.7
Q ss_pred CCEeeCCC----CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCC----CCCCCCHHHHHHHHHHHHHhhCCCcccE
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVP----PPVKMTSSIVRESIDVSRRRMDVPCLDM 70 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~----~~~~~~~~~i~~~~e~SL~~L~~d~iDl 70 (290)
||+||||+ |.||+.||+||++. +|++. ++.+|+.......+ ...+++++.+++++++||+|||+||||+
T Consensus 67 i~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v-~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl 145 (319)
T 1ur3_M 67 VTTVDHADIYGGYQCEAAFGEALKLAPHLRERM-EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDL 145 (319)
T ss_dssp CCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC-EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSE
T ss_pred CCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE-EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeE
Confidence 79999999 47999999999864 46654 45555433211111 1125789999999999999999999999
Q ss_pred EEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCc-chHHHHHHHHhC
Q 022889 71 LQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRP-QQKMAELCQLTG 148 (290)
Q Consensus 71 ~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~g 148 (290)
|++|||+...+ .+++|++|++|+++||||+||||||+.++++.+.+. +.+|+++|++||++++.. +.+++++|+++|
T Consensus 146 ~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~g 224 (319)
T 1ur3_M 146 LLIHRPDPLMD-ADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLR 224 (319)
T ss_dssp EEECSCCTTCC-HHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHT
T ss_pred EEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcC
Confidence 99999998766 899999999999999999999999999999998874 458999999999999875 467999999999
Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCH-HHHHHHHH
Q 022889 149 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI-PVVAVRYI 227 (290)
Q Consensus 149 i~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~-~q~al~~~ 227 (290)
|++++|+||++|.|... +......+.++++|+++|+|+ +|+||+|+
T Consensus 225 i~v~a~spL~~G~L~~~---------------------------------~~~~~~~~~l~~ia~~~g~t~~aqvaL~w~ 271 (319)
T 1ur3_M 225 VRPMAWSCLGGGRLFND---------------------------------DYFQPLRDELAVVAEELNAGSIEQVVNAWV 271 (319)
T ss_dssp CCCEEECCCTTTCSSSC---------------------------------GGGHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CeEEEeccccCccccCC---------------------------------chhHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 99999999999987420 011234589999999999999 99999999
Q ss_pred hhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 228 LDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 228 l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
+++|.+.++|+|+++ ++||++|+++++++||+++++.|+++..+.
T Consensus 272 l~~~~~~~~I~G~~~--~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~ 316 (319)
T 1ur3_M 272 LRLPSQPLPIIGSGK--IERVRAAVEAETLKMTRQQWFRIRKAALGY 316 (319)
T ss_dssp HTSTTCCEEEECCSC--HHHHHHHHGGGGCCCCHHHHHHHHHHHHSS
T ss_pred HhCCCCeEEEeCCCC--HHHHHHHHHhccCCCCHHHHHHHHHHhcCC
Confidence 999999999999999 999999999999999999999999998753
No 13
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.1e-51 Score=359.97 Aligned_cols=217 Identities=21% Similarity=0.363 Sum_probs=192.2
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. .++++.+++++++||+||||||||+|+||||+
T Consensus 61 i~~~DTA~~Yg~E~~lG~al~~~~~~R~~v-~I~TK~~------~~--~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~ 131 (298)
T 3up8_A 61 FRHVDTAQIYGNEAEVGEAIQKSGIPRADV-FLTTKVW------VD--NYRHDAFIASVDESLRKLRTDHVDLLLLHWPG 131 (298)
T ss_dssp CCEEECCTTTTCHHHHHHHHHHHTCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSC
T ss_pred CCEEECCCcccCHHHHHHHHHHcCCChHHE-EEEeccC------CC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCC
Confidence 79999999 55899999999975 45543 3333332 22 46899999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
...+ +.++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++.+ +.+++++|+++||++++|+|
T Consensus 132 ~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~sp 208 (298)
T 3up8_A 132 SDVP-MAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLD--QTKVLQTARRLGMSLTSYYA 208 (298)
T ss_dssp CSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBC--CHHHHHHHHHHTCEEEEECT
T ss_pred CCCC-HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccc--cHHHHHHHHHCCCEEEEECC
Confidence 8776 899999999999999999999999999999999874 5689999999999876 46899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.|... +.+.++|+++|+|++|+||+|++++|.|+ +
T Consensus 209 L~~G~l~~~----------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~p~v~-~ 247 (298)
T 3up8_A 209 MANGKVPAD----------------------------------------PLLTEIGGRHGKTAAQVALRWLVQQQDVI-V 247 (298)
T ss_dssp TGGGHHHHC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHTSTTEE-E
T ss_pred CcCCccccc----------------------------------------chHHHHHHHcCCCHHHHHHHHHHHCCCcE-E
Confidence 999976431 68999999999999999999999998875 8
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHh
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 272 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~ 272 (290)
|+|+++ ++||++|+++++++||++|++.|+++..
T Consensus 248 I~g~~~--~~~l~en~~a~~~~L~~ee~~~l~~l~~ 281 (298)
T 3up8_A 248 LSKTAT--EARLKENFAIFDFALTREEMAAVRELAR 281 (298)
T ss_dssp EECCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred EECCCC--HHHHHHHHHhCCCCCCHHHHHHHHHHhc
Confidence 999999 9999999999999999999999999943
No 14
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=6e-51 Score=363.33 Aligned_cols=243 Identities=21% Similarity=0.283 Sum_probs=197.5
Q ss_pred CCEeeCCC----CchHHHHHHHHhhhhcCCCCceeeeeeeccccC--CCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWV--PPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~----g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~~--~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ |.||+.||+||++ +|++. +|.+|+....... +...+++++.+++++++||+||||||||+|+||
T Consensus 62 i~~~DTA~~Yg~G~sE~~lG~al~~-~R~~v-~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH 139 (317)
T 1ynp_A 62 INYLDTADLYNQGLNEQFVGKALKG-RRQDI-ILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLH 139 (317)
T ss_dssp CCEEECSCBTTBCCCHHHHHHHHTT-CGGGC-EEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred CCeEECccccCCCchHHHHHHHHhc-CCCeE-EEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEec
Confidence 79999999 5699999999987 66644 4444443221100 012356899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeee
Q 022889 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 75 ~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
||+...+ ++++|++|++|+++||||+||||||+.++++++++. .+++++|++||++++..+. ++++|+++||++++|
T Consensus 140 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~ 216 (317)
T 1ynp_A 140 GGTIDDP-IDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKR-SNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVR 216 (317)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEE
T ss_pred CCCCCCC-hHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhc-CCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEe
Confidence 9998766 899999999999999999999999999999999885 3689999999999988765 999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCce
Q 022889 155 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 155 spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~ 234 (290)
+||++|.|+++ ... ... .+ .. .....+.+.+.++|+ |+|++|+||+|++++|.+.
T Consensus 217 spL~~G~L~~~-~~~-----~~~-~~---------------~~-~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~ 271 (317)
T 1ynp_A 217 GPVARGLLSRR-PLP-----EGE-GY---------------LN-YRYDELKLLRESLPT--DRPLHELALQYCLAHDVVA 271 (317)
T ss_dssp CTTGGGTTSSS-CCC-----TTC-CB---------------TT-BCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEE
T ss_pred cCccCcccCCC-CCc-----ccc-cc---------------cc-ccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCe
Confidence 99999999876 110 000 00 00 112233478888888 9999999999999999999
Q ss_pred eeeecccCCcHHHHHHhhhhhc-CCCCHHHHHHHHHHHhhCC
Q 022889 235 GSMIGVRLGLAEHIQDTNAIFM-LSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 235 ~~l~g~~~~~~~~l~enl~a~~-~~L~~e~~~~l~~~~~~~~ 275 (290)
++|+|+++ ++||++|+++++ ++||+++++.|+++....+
T Consensus 272 ~vI~g~~~--~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~~~ 311 (317)
T 1ynp_A 272 TVAAGASS--IDQVKANVQAVEATPLTAEERQHIQKLAKAAV 311 (317)
T ss_dssp EEECCCSS--HHHHHHHHHHHTSCCCCHHHHHHHHHHSCCCC
T ss_pred EEEeCCCC--HHHHHHHHHhccCCCCCHHHHHHHHHHHhhhc
Confidence 99999999 999999999998 8999999999999986543
No 15
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2e-50 Score=355.48 Aligned_cols=222 Identities=19% Similarity=0.291 Sum_probs=191.3
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|.. +. ..+++.+++++++||+|||+||||+|++|||+
T Consensus 49 ~~~~DTA~~Yg~E~~vG~al~~~~~~R~~~-~I~TK~~------~~--~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~ 119 (288)
T 4f40_A 49 YRHIDTAAIYKNEESVGAGLRASGVPREDV-FITTKLW------NT--EQGYESTLAAFEESRQKLGVDYIDLYLIHWPR 119 (288)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHTCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCC
T ss_pred CCeEECcccccCHHHHHHHHHhcCCChhhE-EEEEecC------CC--cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCC
Confidence 79999999 55899999999864 45543 3333332 22 35789999999999999999999999999998
Q ss_pred CCC------ccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCc
Q 022889 78 YSN------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 150 (290)
Q Consensus 78 ~~~------~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 150 (290)
... ....++|++|++|+++||||+||||||+.++++++++. .++++++|++||++++. .+++++|+++||+
T Consensus 120 ~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~ 197 (288)
T 4f40_A 120 GKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIK 197 (288)
T ss_dssp CHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCE
T ss_pred CCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCE
Confidence 631 23789999999999999999999999999999999874 46899999999999775 5899999999999
Q ss_pred eeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhC
Q 022889 151 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQ 230 (290)
Q Consensus 151 via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~ 230 (290)
+++|+||++|.|.+. +.+.++|+++|+|++|+||+|++++
T Consensus 198 v~a~spl~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~w~l~~ 237 (288)
T 4f40_A 198 VEAWSPLGQGKLLSN----------------------------------------PILSAIGAKYNKTAAQVILRWNIQK 237 (288)
T ss_dssp EEEESTTC--CGGGC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHT
T ss_pred EEEecCCCCCccccc----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 999999999987541 6899999999999999999999999
Q ss_pred CCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCCC
Q 022889 231 PAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 277 (290)
Q Consensus 231 ~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~ 277 (290)
| .++|+|+++ ++||++|+++++++||+++++.|+++....+-.
T Consensus 238 ~--~~~i~g~~~--~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r~~ 280 (288)
T 4f40_A 238 N--LITIPKSVH--RERIEENADIFDFELGAEDVMSIDALNTNSRYG 280 (288)
T ss_dssp T--CEECCBCSS--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSS
T ss_pred C--CeEeeCCCC--HHHHHHHhhhcCCCCCHHHHHHHHhhccCCccc
Confidence 8 568999999 999999999999999999999999998766543
No 16
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=3.5e-50 Score=351.76 Aligned_cols=219 Identities=25% Similarity=0.384 Sum_probs=191.6
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+ ++. +.+++.+++++++||+|||+||||+|++|||+
T Consensus 45 ~~~~DTA~~Yg~E~~lG~al~~~~~~R~~~-~i~TK~------~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~ 115 (276)
T 3f7j_A 45 YRSIDTAAIYKNEEGVGIGIKESGVAREEL-FITSKV------WNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPG 115 (276)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHCSCGGGC-EEEEEE------CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCC
T ss_pred CCEEECcCcccCHHHHHHHHhhcCCCcccE-EEEEee------CCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCC
Confidence 79999999 55799999999864 45533 333332 222 35789999999999999999999999999998
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
... ..++|++|++|+++||||+||||||+.++++++++. ++++.++|++||++.+. .+++++|+++||++++|+|
T Consensus 116 ~~~--~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 191 (276)
T 3f7j_A 116 KDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSP 191 (276)
T ss_dssp SSS--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEEST
T ss_pred CCc--HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecC
Confidence 754 799999999999999999999999999999999874 57889999999998654 6899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.|... +.+.++|+++|+|++|+||+|++++|.+ +
T Consensus 192 l~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqval~w~l~~~~v--~ 229 (276)
T 3f7j_A 192 LMQGQLLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHGVV--T 229 (276)
T ss_dssp TGGGTTTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--E
T ss_pred CCCCccCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--E
Confidence 999976431 6899999999999999999999999865 8
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
|+|+++ ++||++|+++++++||+++++.|+++..+.+.
T Consensus 230 i~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~ 267 (276)
T 3f7j_A 230 IPKSIK--EHRIIENADIFDFELSQEDMDKIDALNKDERV 267 (276)
T ss_dssp CCBCCS--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred eeCCCC--HHHHHHHHhhCCCCCCHHHHHHHHhhccCCcc
Confidence 999999 99999999999999999999999999876654
No 17
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=2.3e-50 Score=353.67 Aligned_cols=215 Identities=21% Similarity=0.309 Sum_probs=186.7
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|++ +. ..+++.+++++++||+|||+||||+|++|||+
T Consensus 64 i~~~DTA~~Yg~E~~lG~al~~~~~~R~~~-~i~TK~~------~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~ 134 (283)
T 3o0k_A 64 YRHIDTATIYGNEEGVGKAINGSGIARADI-FLTTKLW------NS--DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPM 134 (283)
T ss_dssp CCEEECCGGGSCHHHHHHHHHTSSSCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSC
T ss_pred CCEEECcccccCHHHHHHHHHHcCCCcccE-EEEEccC------CC--CCCHHHHHHHHHHHHHHhCCCceeEEEECCCC
Confidence 79999999 44699999999864 45533 3333332 21 34789999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH-cCCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE-NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~-~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.....+.++|++|++|+++||||+||||||+.++++++++ .++++.++|++||++.+. .+++++|+++||++++|+|
T Consensus 135 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 212 (283)
T 3o0k_A 135 PSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSP 212 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEEST
T ss_pred CCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecC
Confidence 7633378999999999999999999999999999999987 367789999999998764 5899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.|... +.+.++|+++|+|++|+||+|++++|.+ +
T Consensus 213 L~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~ 250 (283)
T 3o0k_A 213 LGQGKLLED----------------------------------------PTLKSIAEKHAKSVAQIILRWHIETGNI--V 250 (283)
T ss_dssp TCCC-CTTC----------------------------------------HHHHHHHHHHTSCHHHHHHHHHHHHTCE--E
T ss_pred CCCCccccc----------------------------------------hHHHHHHHHhCCCHHHHHHHHHHHCCCE--E
Confidence 999976421 6899999999999999999999999976 7
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 270 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~ 270 (290)
|+|+++ ++||++|+++++++||++|++.|+++
T Consensus 251 I~g~~~--~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 251 IPKSIT--PARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp CCCCCS--HHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred EeCCCC--HHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 999999 99999999999999999999999865
No 18
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=6e-50 Score=354.99 Aligned_cols=219 Identities=25% Similarity=0.384 Sum_probs=191.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+ ++. +.+++.+++++++||+|||+||||+|++|||+
T Consensus 79 i~~~DTA~~Yg~E~~lG~al~~~~~~R~~v-~I~TK~------~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~ 149 (310)
T 3b3e_A 79 YRSIDTAAIYKNEEGVGIGIKESGVAREEL-FITSKV------WNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPG 149 (310)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHSSSCGGGC-EEEEEE------CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCC
T ss_pred CCEEECCCccCCHHHHHHHHHhcCCCcceE-EEEEeC------CCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCC
Confidence 79999999 55799999999864 45533 333332 222 35789999999999999999999999999998
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
... +.++|++|++|+++||||+||||||+.++++++++. ++++.++|++||++.+. .+++++|+++||++++|+|
T Consensus 150 ~~~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 225 (310)
T 3b3e_A 150 KDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSP 225 (310)
T ss_dssp SSC--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEEST
T ss_pred ccc--HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEEecc
Confidence 754 799999999999999999999999999999999874 57889999999998754 5899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.|.+. +.+.++|+++|+|++|+||+|++++|.+ +
T Consensus 226 L~~G~l~~~----------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~ 263 (310)
T 3b3e_A 226 LMQGQLLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHGVV--T 263 (310)
T ss_dssp TGGGTTTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--E
T ss_pred ccCCCcCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHcCCCe--E
Confidence 999976431 6899999999999999999999999865 8
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
|+|+++ ++||++|+++++++||+||++.|+++..+.+.
T Consensus 264 I~gs~~--~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 264 IPKSIK--EHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp CCBCCS--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred EeCCCC--HHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 999999 99999999999999999999999999876654
No 19
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=7.5e-50 Score=350.59 Aligned_cols=220 Identities=19% Similarity=0.257 Sum_probs=190.5
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.||++|++. +|++. ++.+|+. +. +++++.+++++++||+|||+||||+|++|||+
T Consensus 49 i~~iDTA~~Yg~E~~lG~al~~~~~~R~~v-~i~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~ 119 (283)
T 2wzm_A 49 YRLIDTAAAYGNEAAVGRAIAASGIPRDEI-YVTTKLA------TP--DQGFTSSQAAARASLERLGLDYVDLYLIHWPG 119 (283)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHTCCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCT
T ss_pred CCEEECCCcccCHHHHHHHHHhcCCCcccE-EEEeccC------CC--CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCC
Confidence 79999999 55799999999863 45543 3333331 21 35789999999999999999999999999998
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.......++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||++++|+|
T Consensus 120 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 197 (283)
T 2wzm_A 120 GDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGP 197 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred CCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecC
Confidence 64223789999999999999999999999999999999874 57889999999998765 4799999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.|... +.+.++|+++|+|++|+||+|+++++ + ++
T Consensus 198 l~~G~l~~~----------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~ 235 (283)
T 2wzm_A 198 LGVGRLLDH----------------------------------------PAVTAIAEAHGRTAAQVLLRWSIQLG-N-VV 235 (283)
T ss_dssp TTTTGGGGC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-EE
T ss_pred CCCCcccch----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC-C-EE
Confidence 999854210 68899999999999999999999997 3 78
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 236 I~g~~~--~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~ 272 (283)
T 2wzm_A 236 ISRSAN--PERIASNLDVFGFELTADEMETLNGLDDGTR 272 (283)
T ss_dssp EECCSS--HHHHHHHHCCSSCCCCHHHHHHHHTCCCCCC
T ss_pred EeCCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 999999 9999999999999999999999999986654
No 20
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=7.9e-50 Score=351.87 Aligned_cols=224 Identities=19% Similarity=0.287 Sum_probs=190.7
Q ss_pred CCEeeCCC-CchHHHHHHHHhhhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 79 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~ 79 (290)
||+||||+ +.||+.+|++++.....+.+.+++++ .. +. ..+++.+++++++||+||||||||||+||||+..
T Consensus 52 in~~DTA~~YgsE~~vG~~l~~~~~~r~~~~i~tk-~~----~~--~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~ 124 (290)
T 4gie_A 52 YRHIDTAYIYSNERGVGQGIRESGVPREEVWVTTK-VW----NS--DQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK 124 (290)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHCCCGGGSEEEEE-EC----GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS
T ss_pred CCEEecccccCCHHHHHHHHHhcCCcchhcccccc-cc----cc--CCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC
Confidence 79999999 55899999999975433331222222 21 21 3478999999999999999999999999999864
Q ss_pred CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecccc
Q 022889 80 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 158 (290)
Q Consensus 80 ~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~ 158 (290)
+ ..|+|++|++|+++||||+||+|||+.+++.++.+. .+.+.++|+++++. ..+.+++++|+++||++++|+||+
T Consensus 125 -~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~--~~~~~l~~~~~~~gi~~~a~spl~ 200 (290)
T 4gie_A 125 -K-FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPL--FQQRTLREFCKQHNIAITAWSPLG 200 (290)
T ss_dssp -S-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTT--BCCHHHHHHHHHTTCEEEEESTTC
T ss_pred -c-chHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEecccc--chhHHHHHHHHHcCceEeeecccc
Confidence 3 789999999999999999999999999999999874 45677888777764 456799999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeee
Q 022889 159 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 238 (290)
Q Consensus 159 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~ 238 (290)
+|.|++.+.. +.+.++|+++|+|++|+||+|++++|.+ +|+
T Consensus 201 ~G~l~~~~~~-------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~ 241 (290)
T 4gie_A 201 SGEEAGILKN-------------------------------------HVLGEIAKKHNKSPAQVVIRWDIQHGIV--TIP 241 (290)
T ss_dssp SSGGGCGGGC-------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECC
T ss_pred cccccccchh-------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEE
Confidence 9998775432 6899999999999999999999999864 799
Q ss_pred cccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 239 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 239 g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
|+++ ++||++|+++++++||+|+++.|+++.+..+-
T Consensus 242 G~~~--~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~ 277 (290)
T 4gie_A 242 KSTN--KGRIQENFNVWDFKLTEEEMRQIDELNEDKRI 277 (290)
T ss_dssp BCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred CCCC--HHHHHHHHhhcCCCCCHHHHHHHhccCCCCCc
Confidence 9999 99999999999999999999999999876553
No 21
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=1.7e-49 Score=354.15 Aligned_cols=241 Identities=22% Similarity=0.374 Sum_probs=195.8
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.||++|++. +|++. +|.+|+ ++. ..+++.+++++++||+||||||||+|+|
T Consensus 40 i~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~v-~I~TK~------~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~l 110 (316)
T 3o3r_A 40 YRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDL-FIVSKL------WST--FFEKSLMKEAFQKTLSDLKLDYLDLYLI 110 (316)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGC-EEEEEE------CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEEccCccCCHHHHHHHHHHHHhhCCCChHHc-EEEeee------CCC--cCCHHHHHHHHHHHHHHcCCCeeeEEEE
Confidence 79999999 55799999999863 56543 333333 221 3478999999999999999999999999
Q ss_pred ecCC-------------------CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CC--CeeEecccccc
Q 022889 74 HWWD-------------------YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSV 131 (290)
Q Consensus 74 H~~~-------------------~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~ 131 (290)
|||+ ...+ +.++|++|++|+++||||+||||||+.++++++++. ++ +|+++|++||+
T Consensus 111 H~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~ 189 (316)
T 3o3r_A 111 HWPQGLQAGKEFLPKDSQGKVLMSKST-FLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHP 189 (316)
T ss_dssp SCSSCBCCSSCSSCBCTTSCBCBCSCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBT
T ss_pred cCCccccCccccccccccccccccccc-HHHHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCc
Confidence 9996 2233 799999999999999999999999999999999873 33 59999999999
Q ss_pred cCCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHH
Q 022889 132 VDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRI 211 (290)
Q Consensus 132 ~~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 211 (290)
+.+ +.+++++|+++||++++|+||++|... +.. + ....... .+.+.++
T Consensus 190 ~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~--~~~-----~-~~~~~~~----------------------~~~l~~i 237 (316)
T 3o3r_A 190 YLT--QEKLIQYCHSKGIAVIAYSPLGSPDRP--YAK-----P-EDPVVLE----------------------IPKIKEI 237 (316)
T ss_dssp TBC--CHHHHHHHHTTTCEEEEECTTCCTTCT--TCC-----T-TSCCSTT----------------------CHHHHHH
T ss_pred ccc--hHHHHHHHHHcCCEEEEecccCCCCCc--ccc-----c-cchhhhc----------------------CHHHHHH
Confidence 865 468999999999999999999998311 110 0 0000000 1689999
Q ss_pred HHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCCCCCccCCcccc
Q 022889 212 ASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDLLGVIGDCGDE 287 (290)
Q Consensus 212 a~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 287 (290)
|+++|+|++|+||+|++++|. ++|+|+++ ++||++|+++++++||+++++.|+++..+.+......+.+.++
T Consensus 238 a~~~g~t~aqvaL~w~l~~~~--~vi~g~~~--~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~~~~~~~~~~~~ 309 (316)
T 3o3r_A 238 AAKHKKTIAQVLIRFHVQRNV--AVIPKSVT--LSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGLFVTSDEED 309 (316)
T ss_dssp HHHHTCCHHHHHHHHHHTTTC--EECCBCCS--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCCSCGGGTTSTT
T ss_pred HHHhCCCHHHHHHHHHHhCCC--EEeCCCCC--HHHHHHHHhhCCCCcCHHHHHHHHccccCCccccccccccCCC
Confidence 999999999999999999984 58999999 9999999999999999999999999998888766544343343
No 22
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.5e-49 Score=348.24 Aligned_cols=218 Identities=17% Similarity=0.309 Sum_probs=189.2
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. +++++.+++++++||+||||||||+|++|||+
T Consensus 48 ~~~iDTA~~Yg~E~~vG~al~~~~~~R~~~-~i~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~ 118 (281)
T 1vbj_A 48 YRHIDTAAIYKNEESAGRAIASCGVPREEL-FVTTKLW------NS--DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG 118 (281)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHSSSCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC
T ss_pred CCEEECCcccCCHHHHHHHHHhcCCChhHE-EEEeccC------CC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC
Confidence 79999999 44799999999863 45533 3333332 21 35799999999999999999999999999998
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
..+ ..++|++|++|+++||||+||||||+.++++++++. +++++++|++||++++. .+++++|+++||++++|+|
T Consensus 119 -~~~-~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 194 (281)
T 1vbj_A 119 -KDK-FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSP 194 (281)
T ss_dssp -SSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEEST
T ss_pred -CCC-HHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecC
Confidence 444 899999999999999999999999999999999874 56789999999998765 4899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|.+... +.+.++|+++|+|++|+||+|+++++ + ++
T Consensus 195 L~~G~~~~~----------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~ 232 (281)
T 1vbj_A 195 LGQGHLVED----------------------------------------ARLKAIGGKYGKTAAQVMLRWEIQAG-V-IT 232 (281)
T ss_dssp TGGGTTTTC----------------------------------------HHHHHHHHTTTCCHHHHHHHHHHHTT-C-EE
T ss_pred CcCCCCCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC-C-EE
Confidence 999843210 68899999999999999999999996 3 68
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 233 I~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 269 (281)
T 1vbj_A 233 IPKSGN--EARIKENGNIFDFELTAEDIQVIDGMNAGHR 269 (281)
T ss_dssp CCBCSC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred ecCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhccCC
Confidence 999999 9999999999999999999999999987654
No 23
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=1.2e-49 Score=348.76 Aligned_cols=221 Identities=15% Similarity=0.253 Sum_probs=184.8
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+ ++. +++++.+++++++||+|||+||||+|++|||+
T Consensus 41 ~~~iDTA~~Yg~E~~vG~al~~~~~~R~~~-~i~TK~------~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~ 111 (278)
T 1hw6_A 41 YRHIDTAAIYGNEEGVGAAIAASGIARDDL-FITTKL------WND--RHDGDEPAAAIAESLAKLALDQVDLYLVHWPT 111 (278)
T ss_dssp CCEEECGGGTTCCHHHHHHHHHHCCCGGGC-EEEEEE------CCC-------CHHHHHHHHHHHHTCSCEEEEEECCCC
T ss_pred CCEEECcccccCHHHHHHHHHHcCCChhhE-EEEEee------CCC--CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCC
Confidence 79999999 55799999999863 45533 333333 222 35788999999999999999999999999998
Q ss_pred CCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 78 ~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.......++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||++++|+|
T Consensus 112 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 189 (278)
T 1hw6_A 112 PAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGP 189 (278)
T ss_dssp TTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEEST
T ss_pred CCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEecc
Confidence 74223899999999999999999999999999999999874 57889999999999766 5899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceee
Q 022889 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGS 236 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~ 236 (290)
|++|. +++ +.. +.+.++|+++|+|++|+||+|+++++ + ++
T Consensus 190 l~~G~--~~~-------------~~~-----------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~ 229 (278)
T 1hw6_A 190 LGQGK--YDL-------------FGA-----------------------EPVTAAAAAHGKTPAQAVLRWHLQKG-F-VV 229 (278)
T ss_dssp TGGGS--SCC-------------TTS-----------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-BB
T ss_pred ccCCC--ccc-------------ccc-----------------------HHHHHHHHHhCCCHHHHHHHHHHHCC-C-EE
Confidence 99983 110 000 68899999999999999999999996 4 69
Q ss_pred eecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 237 MIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 237 l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 230 I~g~~~--~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 230 FPKSVR--RERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp CCCCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred EcCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 999999 999999999999999999999999987653
No 24
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2.5e-49 Score=354.44 Aligned_cols=237 Identities=16% Similarity=0.207 Sum_probs=195.4
Q ss_pred CCEeeCCC-CchHHHHHHHHhhhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCC-
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY- 78 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~- 78 (290)
||+||||+ +.+|+.||+||++...+.......+.+..++.++. ..+++.+++++++||+||||||||||++|||+.
T Consensus 40 in~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~ 117 (324)
T 4gac_A 40 YRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNT--KHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAF 117 (324)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEE
T ss_pred CCEEECCcccCCHHHHHHHHHhhhcccceecccccccccccCCC--CCCHHHHHHHHHHHHHHhCCCccceeeeccCccc
Confidence 79999999 44899999999875333210111122233333222 467899999999999999999999999999863
Q ss_pred ------------------CCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchH
Q 022889 79 ------------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 79 ------------------~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~ 139 (290)
..+ ++|+|++|++|+++||||+||+|||+.++++.+... .+.+.++|++||+... +.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~ 194 (324)
T 4gac_A 118 ERGDNPFPKNADGTVRYDSTH-YKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNE 194 (324)
T ss_dssp CSSSCSSCBCTTSCBCEECCC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHH
T ss_pred ccccccccccccCccccCCCC-HHHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHH
Confidence 223 799999999999999999999999999999998874 5789999999998644 468
Q ss_pred HHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCH
Q 022889 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~ 219 (290)
++++|+++||++++|+||++|.+++++.... .+ . ..+.+.++|+++|+|+
T Consensus 195 l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~--------~~-----~-----------------~~~~l~~iA~~~g~t~ 244 (324)
T 4gac_A 195 LIAHCHARGLEVTAYSPLGSSDRAWRHPDEP--------VL-----L-----------------EEPVVLALAEKHGRSP 244 (324)
T ss_dssp HHHHHHHHTCEEEEESTTCCGGGGGGSTTSC--------CG-----G-----------------GCHHHHHHHHHHTCCH
T ss_pred HHHHHHHhceeeeecCCcccCccccCCCCCc--------ch-----h-----------------hHHHHHHHHHHhCCCH
Confidence 9999999999999999999999988754321 00 0 0167899999999999
Q ss_pred HHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 220 ~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
+|+||+|++++|.+ +|+|+++ ++||+||++++++.||+||+++|+++.++.|-
T Consensus 245 aqvaL~w~l~~~~v--~I~G~~~--~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R~ 297 (324)
T 4gac_A 245 AQILLRWQVQRKVI--CIPKSIN--PSRILQNIQVFDFTFSPEEMKQLDALNKNWRY 297 (324)
T ss_dssp HHHHHHHHHHTTCE--ECCBCCC--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHCCCE--EEECCCC--HHHHHHHHhhCCCCCCHHHHHHHhccCcCCCc
Confidence 99999999999854 8999999 99999999999999999999999999877664
No 25
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=9e-49 Score=350.79 Aligned_cols=231 Identities=19% Similarity=0.294 Sum_probs=192.3
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|++ +. ..+++.+++++++||+|||+||||+|+|
T Consensus 49 ~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~-~i~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~ll 119 (326)
T 3buv_A 49 YRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDI-FYCGKLW------AT--NHVPEMVRPTLERTLRVLQLDYVDLYII 119 (326)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEECccccCCHHHHHHHHHHHHhcCCCChhHe-EEEeeeC------CC--cCCHHHHHHHHHHHHHHhCCCceeEEEE
Confidence 79999999 44799999999862 45543 3333332 11 3578999999999999999999999999
Q ss_pred ecCCCC------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCC--eeEeccccccc
Q 022889 74 HWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVV 132 (290)
Q Consensus 74 H~~~~~------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~ 132 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. +++ |+++|++||++
T Consensus 120 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~ 199 (326)
T 3buv_A 120 EVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPY 199 (326)
T ss_dssp SCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTT
T ss_pred ccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccc
Confidence 999641 113789999999999999999999999999999999874 456 89999999998
Q ss_pred CCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHH
Q 022889 133 DMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIA 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la 212 (290)
.+. .+++++|+++||++++|+||++|.|+ ++.... .+.+ + . .+.+.++|
T Consensus 200 ~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~------~~~~-------~-------------~--~~~l~~ia 248 (326)
T 3buv_A 200 FTQ--PKLLKFCQQHDIVITAYSPLGTSRNP-IWVNVS------SPPL-------L-------------K--DALLNSLG 248 (326)
T ss_dssp BCC--HHHHHHHHHTTCEEEEESTTCCCCCT-TTSCTT------SCCG-------G-------------G--CHHHHHHH
T ss_pred cCc--HHHHHHHHHcCCEEEEeccccCCccc-cccccC------Cccc-------c-------------c--cHHHHHHH
Confidence 754 58999999999999999999999886 443210 0000 0 0 17899999
Q ss_pred HHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 213 ~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+++|+|++|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 249 ~~~g~s~aqvaL~w~l~~~--~~~I~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 307 (326)
T 3buv_A 249 KRYNKTAAQIVLRFNIQRG--VVVIPKSFN--LERIKENFQIFDFSLTEEEMKDIEALNKNVR 307 (326)
T ss_dssp HHHTCCHHHHHHHHHHHTT--CEECCBCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCCSCC
T ss_pred HHhCCCHHHHHHHHHHhCC--CEEEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhccCCc
Confidence 9999999999999999998 479999999 9999999999999999999999999987654
No 26
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=3.1e-49 Score=352.51 Aligned_cols=238 Identities=18% Similarity=0.257 Sum_probs=193.6
Q ss_pred CCEeeCCC-CchHHHHHHHHhh------hhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINR------VRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~------~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.||++|++ .+|++. ++.+|+ ++. ..+++.+++++++||+|||+||||+|+|
T Consensus 43 i~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~~-~i~TK~------~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~l 113 (317)
T 1qwk_A 43 YRLIDTASVYQNEEAIGTAIKELLEEGVVKREEL-FITTKA------WTH--ELAPGKLEGGLRESLKKLQLEYVDLYLA 113 (317)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHHTSCCGGGC-EEEEEE------CTT--TSSTTTHHHHHHHHHHHHTCSCBSEEEE
T ss_pred CCEEEccccccCHHHHHHHHHHHhhcCCCChhhe-EEEeee------CCC--cCCHHHHHHHHHHHHHHhCCCceeEEEE
Confidence 79999999 4479999999986 245543 333333 222 3577889999999999999999999999
Q ss_pred ecCCC---------CCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHH
Q 022889 74 HWWDY---------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAEL 143 (290)
Q Consensus 74 H~~~~---------~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~ 143 (290)
|||+. ..+ +.++|++|++|+++||||+||||||+.++++++++. +++++++|++||++.+. .+++++
T Consensus 114 H~p~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~ 190 (317)
T 1qwk_A 114 HMPAAFNDDMSEHIASP-VEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDF 190 (317)
T ss_dssp SCSCEECTTSCSEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHH
T ss_pred eccCccccccccccCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHH
Confidence 99974 223 799999999999999999999999999999999874 46799999999998764 589999
Q ss_pred HHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHH
Q 022889 144 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVA 223 (290)
Q Consensus 144 ~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~a 223 (290)
|+++||++++|+||++|.|+ ++.... ..+ .+.+. .+ .... .+.+.++|+++|+|++|+|
T Consensus 191 ~~~~gI~v~a~spL~~G~l~-~~~~~~-~~~-~~~~~-~~---------------~~~~--~~~l~~ia~~~g~s~aqva 249 (317)
T 1qwk_A 191 CKKHNISVTSYATLGSPGRV-NFTLPT-GQK-LDWAP-AP---------------SDLQ--DQNVLALAEKTHKTPAQVL 249 (317)
T ss_dssp HHHTTCEEEEESTTCSCCEE-CCBCTT-CCB-CCCEE-CS---------------SGGG--CHHHHHHHHHHTCCHHHHH
T ss_pred HHHcCCEEEEecCccCCCcc-cccccc-ccc-ccccc-cc---------------hhhc--cHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999886 443211 000 00000 00 0000 1789999999999999999
Q ss_pred HHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 224 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 224 l~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
|+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 250 L~w~l~~~--~~vI~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 297 (317)
T 1qwk_A 250 LRYALDRG--CAILPKSIQ--ENRIKENFEVFDFSLTEEDIAKLEESKNSQR 297 (317)
T ss_dssp HHHHHHTT--CEEECCCCS--HHHHHHHHCCSSCCCCHHHHHHHTTTCCCCC
T ss_pred HHHHHhCC--CeEEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHHhhcCc
Confidence 99999998 379999999 9999999999999999999999999987654
No 27
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-48 Score=349.96 Aligned_cols=232 Identities=18% Similarity=0.300 Sum_probs=191.7
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. +|.+|+. +. ..+++.+++++++||+||||||||+|+|
T Consensus 47 i~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~~-~I~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~ll 117 (324)
T 3ln3_A 47 YRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDL-FVTTKLW------CT--CFRPELVXPALEXSLXXLQLDYVDLYIM 117 (324)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEECcccccCHHHHHHHHHHhhccCCccccee-EEEeeeC------Cc--cCCHHHHHHHHHHHHHHhCCCcceEEEE
Confidence 79999999 55799999999863 46543 3333331 21 3579999999999999999999999999
Q ss_pred ecCCCC------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCC--eeEeccccccc
Q 022889 74 HWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVV 132 (290)
Q Consensus 74 H~~~~~------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~ 132 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. +++ |.++|++||++
T Consensus 118 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~ 197 (324)
T 3ln3_A 118 HYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLY 197 (324)
T ss_dssp SCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTT
T ss_pred ecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcc
Confidence 999752 123799999999999999999999999999999999874 344 88999999998
Q ss_pred CCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHH
Q 022889 133 DMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIA 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la 212 (290)
.+ +.+++++|+++||++++|+||++|.+.. +.... .+. ... .+.+.++|
T Consensus 198 ~~--~~~l~~~~~~~gi~v~a~spL~~g~~~~-~~~~~------~~~--------------------~~~--~~~l~~ia 246 (324)
T 3ln3_A 198 LN--QRXLLDYCESXDIVLVAYGALGTQRYXE-WVDQN------SPV--------------------LLN--DPVLCDVA 246 (324)
T ss_dssp BC--CHHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT------SCC--------------------GGG--CHHHHHHH
T ss_pred cc--hHHHHHHHHHcCCEEEEecCCCCCCccc-ccccC------Ccc--------------------hhc--CHHHHHHH
Confidence 65 4689999999999999999999997531 11100 000 000 16899999
Q ss_pred HHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 213 ~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
+++|+|++|+||+|++++|. ++|+|+++ ++||++|+++++++||+++++.|+++..+.+-
T Consensus 247 ~~~g~t~aqvaL~w~l~~~~--~~I~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r~ 306 (324)
T 3ln3_A 247 XXNXRSPALIALRYLIQRGI--VPLAQSFX--ENEMRENLQVFGFQLSPEDMXTLDGLNXNFRY 306 (324)
T ss_dssp HHHTSCHHHHHHHHHHHTTC--EEEECCSS--HHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCS
T ss_pred HhhCCCHHHHHHHHHHhCCC--EEEeCCCC--HHHHHHHHhhCCCCcCHHHHHHHHhcccCCcc
Confidence 99999999999999999984 58999999 99999999999999999999999999877664
No 28
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=7.8e-49 Score=350.74 Aligned_cols=231 Identities=22% Similarity=0.333 Sum_probs=191.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhh------hhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINR------VRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~------~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++ .+|++. ++.+|++ +. ..+++.+++++++||+|||+||||+|+|
T Consensus 46 ~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~-~I~TK~~------~~--~~~~~~v~~~~~~SL~rLg~dyiDl~ll 116 (323)
T 1afs_A 46 FRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDI-FYTSKLW------ST--FHRPELVRTCLEKTLKSTQLDYVDLYII 116 (323)
T ss_dssp CCEEECCTTTTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSTTTHHHHHHHHHHHHCCSSEEEEEE
T ss_pred CCEEECcccccCHHHHHHHHHHHHhcCCCChHHe-EEEEecC------CC--cCCHHHHHHHHHHHHHHhCCCceeEEEe
Confidence 79999999 5579999999986 246543 3333332 11 2467889999999999999999999999
Q ss_pred ecCCCC------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CC--CeeEeccccccc
Q 022889 74 HWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVV 132 (290)
Q Consensus 74 H~~~~~------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~ 132 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++||++
T Consensus 117 H~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~ 196 (323)
T 1afs_A 117 HFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLY 196 (323)
T ss_dssp SCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTT
T ss_pred cCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccc
Confidence 999520 113789999999999999999999999999999999874 46 789999999998
Q ss_pred CCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHH
Q 022889 133 DMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIA 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la 212 (290)
.+. .+++++|+++||++++|+||++|.|++ +.... .+.+ + . .+.++++|
T Consensus 197 ~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~------~~~~-------~-------------~--~~~l~~ia 245 (323)
T 1afs_A 197 LNQ--SKMLDYCKSKDIILVSYCTLGSSRDKT-WVDQK------SPVL-------L-------------D--DPVLCAIA 245 (323)
T ss_dssp BCC--HHHHHHHHHHTCEEEEESTTSCCCCTT-TSCTT------SCCG-------G-------------G--CHHHHHHH
T ss_pred cch--HHHHHHHHHcCCEEEEecCccCCcccc-ccccC------Ccch-------h-------------c--CHHHHHHH
Confidence 764 589999999999999999999999875 32110 0000 0 0 17899999
Q ss_pred HHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 213 ~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+++|+|++|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 246 ~~~g~s~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 304 (323)
T 1afs_A 246 KKYKQTPALVALRYQLQRG--VVPLIRSFN--AKRIKELTQVFEFQLASEDMKALDGLNRNFR 304 (323)
T ss_dssp HHTTCCHHHHHHHHHHHTT--CEEEECCSC--HHHHHHHTTTTSCCCCHHHHHHHHTTCCCCC
T ss_pred HHhCCCHHHHHHHHHHhCC--CEEeeCCCC--HHHHHHHHhhccCCCCHHHHHHHHhhcccCC
Confidence 9999999999999999998 479999999 9999999999999999999999999987654
No 29
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-48 Score=344.78 Aligned_cols=218 Identities=18% Similarity=0.258 Sum_probs=188.3
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. .++++.+++++++||+|||+||||+|+|
T Consensus 53 i~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~v-~I~TK~~------~~--~~~~~~v~~~~~~SL~rLg~dyiDl~ll 123 (298)
T 1vp5_A 53 YRLIDTAASYMNEEGVGRAIKRAIDEGIVRREEL-FVTTKLW------VS--DVGYESTKKAFEKSLKKLQLEYIDLYLI 123 (298)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSSHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEECCCcccCHHHHHHHHHHhhhccCCChhhE-EEEeccC------CC--CCCHHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 79999999 44799999999864 45543 3333331 21 3578999999999999999999999999
Q ss_pred ecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCcee
Q 022889 74 HWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLI 152 (290)
Q Consensus 74 H~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~vi 152 (290)
|||+. + ..++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||+++
T Consensus 124 H~p~~--~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~ 198 (298)
T 1vp5_A 124 HQPFG--D-VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPE 198 (298)
T ss_dssp CSSCS--C-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEE
T ss_pred cCCCC--C-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEE
Confidence 99986 3 899999999999999999999999999999999884 57889999999999765 589999999999999
Q ss_pred eecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCC
Q 022889 153 TYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 232 (290)
Q Consensus 153 a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~ 232 (290)
+|+||++|. +++.. -+.+.++|+++|+|++|+||+|+++++
T Consensus 199 a~spL~~G~--~~~l~------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~- 239 (298)
T 1vp5_A 199 AWGPFAEGR--KNIFQ------------------------------------NGVLRSIAEKYGKTVAQVILRWLTQKG- 239 (298)
T ss_dssp EESTTGGGG--GGGGG------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTT-
T ss_pred EecccccCC--ccccC------------------------------------cHHHHHHHHHhCCCHHHHHHHHHHhCC-
Confidence 999999983 11000 068899999999999999999999997
Q ss_pred ceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 233 VAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 233 v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
+ ++|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 240 v-~vI~g~~~--~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 240 I-VAIPKTVR--RERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp C-EECCCCSC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred C-EEEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 4 78999999 999999999999999999999999998654
No 30
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=2.1e-48 Score=349.01 Aligned_cols=231 Identities=21% Similarity=0.330 Sum_probs=192.0
Q ss_pred CCEeeCCC-CchHHHHHHHHhh------hhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINR------VRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~------~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.||++|++ .+|++. ++.+|++ +. ..+++.+++++++||+||||||||+|+|
T Consensus 46 ~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~~~-~I~TK~~------~~--~~~~~~v~~~~e~SL~rLg~dyiDl~ll 116 (331)
T 1s1p_A 46 FRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDI-FYTSKLW------ST--FHRPELVRPALENSLKKAQLDYVDLYLI 116 (331)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEEccccccCHHHHHHHHHHHHhcCCCCchhe-EEEeccC------Cc--cCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 79999999 4479999999986 245543 3333332 11 3578999999999999999999999999
Q ss_pred ecCCCC------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CC--CeeEeccccccc
Q 022889 74 HWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVV 132 (290)
Q Consensus 74 H~~~~~------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~ 132 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. ++ +|+++|++||++
T Consensus 117 H~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~ 196 (331)
T 1s1p_A 117 HSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPY 196 (331)
T ss_dssp CCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTT
T ss_pred ccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCC
Confidence 999531 113789999999999999999999999999999999874 45 789999999998
Q ss_pred CCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHH
Q 022889 133 DMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIA 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la 212 (290)
.+. .+++++|+++||++++|+||++|.|++ +.... .+.+ +. .+.+.++|
T Consensus 197 ~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~------~~~~--------------------~~--~~~l~~ia 245 (331)
T 1s1p_A 197 FNR--SKLLDFCKSKDIVLVAYSALGSQRDKR-WVDPN------SPVL--------------------LE--DPVLCALA 245 (331)
T ss_dssp BCC--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT------SCCG--------------------GG--CHHHHHHH
T ss_pred cCh--HHHHHHHHHcCCEEEEeccccCCcccc-cccCC------Cccc--------------------cc--CHHHHHHH
Confidence 764 589999999999999999999999875 32110 0000 00 16899999
Q ss_pred HHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 213 ~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+++|+|++|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 246 ~~~g~s~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 304 (331)
T 1s1p_A 246 KKHKRTPALIALRYQLQRG--VVVLAKSYN--EQRIRQNVQVFEFQLTAEDMKAIDGLDRNLH 304 (331)
T ss_dssp HHHTSCHHHHHHHHHHHTT--CEEEEECCS--HHHHHHHGGGGGCCCCHHHHHHHHTTCCCCC
T ss_pred HHhCCCHHHHHHHHHHhCC--CEEeeCCCC--HHHHHHHhhhcCCCcCHHHHHHHHHHhcCCc
Confidence 9999999999999999998 379999999 9999999999999999999999999886544
No 31
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=3.1e-48 Score=345.93 Aligned_cols=230 Identities=19% Similarity=0.328 Sum_probs=190.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. ..+++.+++++++||+|||+||||+|+|
T Consensus 40 ~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~-~I~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~ll 110 (316)
T 1us0_A 40 YRHIDCAHVYQNENEVGVAIQEKLREQVVKREEL-FIVSKLW------CT--YHEKGLVKGACQKTLSDLKLDYLDLYLI 110 (316)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSSCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCBSEEEE
T ss_pred CCEEEcccccCCHHHHHHHHHHHHhcCCCChhHe-EEEEeeC------CC--cCCHHHHHHHHHHHHHHhCCCceeeEEE
Confidence 79999999 44799999999862 45543 3333332 11 3578999999999999999999999999
Q ss_pred ecCCCC------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CC--CeeEeccccccc
Q 022889 74 HWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVV 132 (290)
Q Consensus 74 H~~~~~------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~ 132 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++||++
T Consensus 111 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~ 190 (316)
T 1us0_A 111 HWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPY 190 (316)
T ss_dssp SSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTT
T ss_pred ecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCc
Confidence 999641 113789999999999999999999999999999999874 45 789999999998
Q ss_pred CCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHH
Q 022889 133 DMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIA 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la 212 (290)
.+. .+++++|+++||++++|+||++|.|. +.... .+.... .+.+.++|
T Consensus 191 ~~~--~~l~~~~~~~gI~v~a~spL~~G~l~--~~~~~------~~~~~~----------------------~~~l~~ia 238 (316)
T 1us0_A 191 LTQ--EKLIQYCQSKGIVVTAYSPLGSPDRP--WAKPE------DPSLLE----------------------DPRIKAIA 238 (316)
T ss_dssp BCC--HHHHHHHHHTTCEEEEESTTCCTTCT--TCCTT------SCCTTT----------------------CHHHHHHH
T ss_pred cCC--HHHHHHHHHcCCEEEEecccccCccc--cccCC------Cccccc----------------------CHHHHHHH
Confidence 754 58999999999999999999999762 22110 000000 16899999
Q ss_pred HHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 213 ~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+++|+|++|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 239 ~~~g~s~aqvaL~w~l~~~--~~~I~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 297 (316)
T 1us0_A 239 AKHNKTTAQVLIRFPMQRN--LVVIPKSVT--PERIAENFKVFDFELSSQDMTTLLSYNRNWR 297 (316)
T ss_dssp HHHTCCHHHHHHHHHHHTT--CEECCBCCC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHhCCCHHHHHHHHHHHCC--CEEEeCCCC--HHHHHHHhhhcCCCCCHHHHHHHHhhccCCc
Confidence 9999999999999999998 479999999 9999999999999999999999999986644
No 32
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=3.9e-49 Score=351.04 Aligned_cols=222 Identities=21% Similarity=0.308 Sum_probs=186.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhhhhc----CCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeec
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRVRR----ERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 75 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~~r----~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~ 75 (290)
||+||||+ +.+|+.+|+++++... .+. .+ ++.+|.++. ..+++.+++++++||+||||||||||++||
T Consensus 79 i~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~-~~----~i~~k~~~~--~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~ 151 (314)
T 3b3d_A 79 YRSIDTAAIYGNEAGVGEGIREGIEEAGISRE-DL----FITSKVWNA--DLGYEETLAAFETSLSKLGLDYLDLYLIHW 151 (314)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHHHTCCGG-GC----EEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESS
T ss_pred CCEEECccccCChHHHHHHHHHHHHHhCCCcc-cc----cccccCcCC--CCCHHHHHHHHHHHHHHhCCCccccccccc
Confidence 79999999 5589999999875321 111 22 222222222 468999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeee
Q 022889 76 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 76 ~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
|+.. . ..++|++|++|+++||||+||||||+.++++++.+. .+++.++|++++ .+..+.+++++|+++||++++|
T Consensus 152 ~~~~-~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~--~~~~~~~ll~~c~~~gI~v~a~ 227 (314)
T 3b3d_A 152 PVEG-K-YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFH--PRLTQKELIRYCQNQGIQMEAW 227 (314)
T ss_dssp CCTT-T-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECB--TTBCCHHHHHHHHHHTCEEEEE
T ss_pred cccc-c-hhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEeccc--cccchHHHHHHHHHcCCEEEEe
Confidence 9864 3 689999999999999999999999999999999874 455666665554 4666789999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCce
Q 022889 155 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 155 spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~ 234 (290)
+||++|.|+++ ..+.++|+++|+|++|+||+|++++|.+
T Consensus 228 sPL~~G~L~~~----------------------------------------~~~~~ia~~~g~t~aqvaL~w~l~~~~v- 266 (314)
T 3b3d_A 228 SPLMQGQLLDH----------------------------------------PVLADIAQTYNKSVAQIILRWDLQHGII- 266 (314)
T ss_dssp STTGGGTTTTC----------------------------------------HHHHHHHHHTTCCHHHHHHHHHHHTTCE-
T ss_pred ccccCCcccCc----------------------------------------hhhHHHHHHcCCCHHHHHHHHHHhCCCE-
Confidence 99999998763 5678899999999999999999999865
Q ss_pred eeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCCC
Q 022889 235 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 277 (290)
Q Consensus 235 ~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~ 277 (290)
+|+|+++ ++||+||+++++++||+||++.|+++.++.+-.
T Consensus 267 -~I~G~~~--~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 306 (314)
T 3b3d_A 267 -TIPKSTK--EHRIKENASVFDFELTQDDMNRIDALNENLRVG 306 (314)
T ss_dssp -ECCBCCC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred -EEECCCC--HHHHHHHHHhcCCCCCHHHHHHHhccCCCCCCC
Confidence 7999999 999999999999999999999999998776643
No 33
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-48 Score=344.64 Aligned_cols=219 Identities=18% Similarity=0.318 Sum_probs=186.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh--hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCC
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~--~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~ 77 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. ++ +.+++++++||+||||||||+|++|||+
T Consensus 63 i~~~DTA~~Yg~E~~vG~al~~~~~~R~~v-~I~TK~~------~~--~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~ 131 (296)
T 1mzr_A 63 YRSIDTAAAYKNEEGVGKALKNASVNREEL-FITTKLW------ND--DH--KRPREALLDSLKKLQLDYIDLYLMHWPV 131 (296)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHSCSCGGGC-EEEEEEC------GG--GT--TCHHHHHHHHHHHHTCSCEEEEEESCCC
T ss_pred CCEEECCccccCHHHHHHHHHhcCCCcccE-EEEeccC------CC--cH--HHHHHHHHHHHHHhCCCcEEEEEEccCC
Confidence 79999999 44799999999863 45533 3333332 11 11 6799999999999999999999999998
Q ss_pred CC-CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 78 YS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 78 ~~-~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
.. .+ +.++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||++++|+
T Consensus 132 ~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~s 208 (296)
T 1mzr_A 132 PAIDH-YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWS 208 (296)
T ss_dssp TTTCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEES
T ss_pred CCcCC-HHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEec
Confidence 73 44 899999999999999999999999999999999873 67889999999998765 589999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCcee
Q 022889 156 TVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAG 235 (290)
Q Consensus 156 pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~ 235 (290)
||++|.+. + +.. +.+.++|+++|+|++|+||+|+++++ + +
T Consensus 209 pL~~G~~~--~-------------l~~-----------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~ 248 (296)
T 1mzr_A 209 PLAQGGKG--V-------------FDQ-----------------------KVIRDLADKYGKTPAQIVIRWHLDSG-L-V 248 (296)
T ss_dssp TTTTTCTT--T-------------TTS-----------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-E
T ss_pred cccCCcch--h-------------cCh-----------------------HHHHHHHHHhCCCHHHHHHHHHHhCC-C-E
Confidence 99999431 0 000 68899999999999999999999996 4 6
Q ss_pred eeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 236 SMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 236 ~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 249 vI~g~~~--~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~ 286 (296)
T 1mzr_A 249 VIPKSVT--PSRIAENFDVWDFRLDKDELGEIAKLDQGKR 286 (296)
T ss_dssp ECCBCCC--HHHHHHTTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred EEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhhcCC
Confidence 8999999 9999999999999999999999999987654
No 34
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=2.1e-48 Score=349.23 Aligned_cols=231 Identities=19% Similarity=0.249 Sum_probs=188.4
Q ss_pred CCEeeCCC-CchHHHHHHHHh--------hhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEE
Q 022889 1 MGSFDFVD-GPAEDLYGIFIN--------RVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~--------~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~ 71 (290)
||+||||+ +.+|+.+|++|+ +.+|++. +|.+|+. +. ..+++.+++++++||+|||+||||+|
T Consensus 52 i~~~DTA~~YgsE~~vG~al~~~~~~~~~g~~R~~v-~I~TK~~------~~--~~~~~~v~~~~e~SL~rLg~dyiDl~ 122 (334)
T 3krb_A 52 YRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDV-WITSKLW------NY--NHRPELVREQCKKTMSDLQVDYLDLF 122 (334)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHHHCTTSSCCGGGC-EEEEEEC------GG--GCSGGGHHHHHHHHHHHHTCSCEEEE
T ss_pred CCEEECcccccCHHHHHHHHHHHhhhccCCCChhhE-EEEeeeC------CC--CCCHHHHHHHHHHHHHHcCCCceeEE
Confidence 79999999 448999999998 2255533 3333332 21 35789999999999999999999999
Q ss_pred EeecCCCCC--------------------ccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEeccccc
Q 022889 72 QFHWWDYSN--------------------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHS 130 (290)
Q Consensus 72 ~lH~~~~~~--------------------~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n 130 (290)
+||||+... ..+.++|++|++|+++||||+||||||+.++++++++. +++++++|++||
T Consensus 123 llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~ 202 (334)
T 3krb_A 123 LVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIH 202 (334)
T ss_dssp EECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECB
T ss_pred EEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecC
Confidence 999994311 23799999999999999999999999999999999874 578999999999
Q ss_pred ccCCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHH
Q 022889 131 VVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKR 210 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (290)
++.+. .+++++|+++||++++|+||++|+|++++.... . ..+ ... .+.+.+
T Consensus 203 ~~~~~--~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~--------~-~~~----------------~~~--~~~l~~ 253 (334)
T 3krb_A 203 PWHPN--DATVKFCLDNGIGVTAYSPMGGSYADPRDPSGT--------Q-KNV----------------ILE--CKTLKA 253 (334)
T ss_dssp TTBCC--HHHHHHHHHTTCEEEEESTTCCSBC-------C--------C-BCG----------------GGG--CHHHHH
T ss_pred ccccc--HHHHHHHHHcCCEEEEEecCCCCcccCCCCCCC--------c-ccc----------------hhc--cHHHHH
Confidence 98764 689999999999999999999999998753210 0 000 000 178999
Q ss_pred HHHHhCCCHHHHHH-----HHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 211 IASKHGVSIPVVAV-----RYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 211 la~~~~~s~~q~al-----~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
+|+++|+|++|+|| +|+++ + .++|||+++ ++||++|+++++++||+++++.|+++..+.
T Consensus 254 iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~gs~~--~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 254 IADAKGTSPHCVALAWHVKKWNTS-M--YSVIPKSQT--PARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp HHHHHTSCHHHHHHHHHHHHSCST-T--EEECCBCSS--HHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred HHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 99999999999999 88887 3 679999999 999999999999999999999999999876
No 35
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=2.2e-48 Score=346.28 Aligned_cols=225 Identities=20% Similarity=0.295 Sum_probs=189.0
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. .++++.+++++++||+|||+||||+|+|
T Consensus 49 ~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~~~-~i~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~ll 119 (312)
T 1zgd_A 49 YRHFDTAAAYGSEQALGEALKEAIELGLVTRDDL-FVTSKLW------VT--ENHPHLVIPALQKSLKTLQLDYLDLYLI 119 (312)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSGGGHHHHHHHHHHHHTCSCBSEEEE
T ss_pred CCEEECccccCCHHHHHHHHHHHHhcCCCcchhe-EEEeccC------CC--CCCHHHHHHHHHHHHHHhCCCceeEEEE
Confidence 79999999 44899999999862 45543 3333332 11 3478899999999999999999999999
Q ss_pred ecCCCC---------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcc
Q 022889 74 HWWDYS---------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQ 137 (290)
Q Consensus 74 H~~~~~---------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~ 137 (290)
|||+.. ...+.++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++++.
T Consensus 120 H~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~-- 197 (312)
T 1zgd_A 120 HWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ-- 197 (312)
T ss_dssp CCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--
T ss_pred eccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--
Confidence 999631 113789999999999999999999999999999999874 46899999999999764
Q ss_pred hHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCC
Q 022889 138 QKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV 217 (290)
Q Consensus 138 ~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~ 217 (290)
.+++++|+++||++++|+||++|.+.+. ...+. .+.+.++|+++|+
T Consensus 198 ~~l~~~~~~~gi~v~a~spl~~G~~~~~-----------~~~~~-----------------------~~~l~~ia~~~g~ 243 (312)
T 1zgd_A 198 KKLREFCNAHGIVLTAFSPVRKGASRGP-----------NEVME-----------------------NDMLKEIADAHGK 243 (312)
T ss_dssp HHHHHHHHHTTCEEEEESTTTTTTTTSS-----------CTTTT-----------------------CHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCEEEEecCCCCCCCCCC-----------ccccc-----------------------cHHHHHHHHHcCC
Confidence 5899999999999999999998864321 00000 0688999999999
Q ss_pred CHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 218 SIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 218 s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
|++|+||+|+++++ .++|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 244 s~aqvaL~w~l~~~--~~~I~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 296 (312)
T 1zgd_A 244 SVAQISLRWLYEQG--VTFVPKSYD--KERMNQNLRIFDWSLTKEDHEKIAQIKQNR 296 (312)
T ss_dssp CHHHHHHHHHHHTT--CEECCCCCS--HHHHHHTTCCSSCCCCHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHCC--CEEEeCCCC--HHHHHHHHHhccCCCCHHHHHHHHHHhccC
Confidence 99999999999996 379999999 999999999999999999999999988653
No 36
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=6e-48 Score=344.98 Aligned_cols=234 Identities=21% Similarity=0.256 Sum_probs=189.2
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|++ +. ..+++.+++++++||+|||+||||+|+|
T Consensus 43 ~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~-~i~TK~~------~~--~~~~~~v~~~~~~SL~rL~~dyiDl~ll 113 (322)
T 1mi3_A 43 YRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEI-FLTSKLW------NN--YHDPKNVETALNKTLADLKVDYVDLFLI 113 (322)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCEEEccccccCHHHHHHHHHHHhhcCCCChhhE-EEEEeeC------CC--CCCHHHHHHHHHHHHHHhCCCCeeeEEE
Confidence 79999999 44799999999862 55543 3333332 11 3578999999999999999999999999
Q ss_pred ecCCCC------------------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEeccc
Q 022889 74 HWWDYS------------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQ 128 (290)
Q Consensus 74 H~~~~~------------------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~ 128 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. +++|+++|++
T Consensus 114 H~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~ 193 (322)
T 1mi3_A 114 HFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVE 193 (322)
T ss_dssp CCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEE
T ss_pred ecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecc
Confidence 999531 113789999999999999999999999999999999874 5689999999
Q ss_pred ccccCCCcchHHHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHH
Q 022889 129 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 208 (290)
Q Consensus 129 ~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (290)
||++.+. .+++++|+++||++++|+||++|.+.. .+...+...+.. +. .+.+
T Consensus 194 ~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~----~~~~~~~~~~~~--------------------~~--~~~l 245 (322)
T 1mi3_A 194 HHPYLQQ--PKLIEFAQKAGVTITAYSSFGPQSFVE----MNQGRALNTPTL--------------------FA--HDTI 245 (322)
T ss_dssp CBTTBCC--HHHHHHHHHTTCEEEEECTTTTHHHHT----TTCHHHHTSCCT--------------------TS--CHHH
T ss_pred cCcCcCc--HHHHHHHHHcCCEEEEECCCCCCCccc----ccccccccCccc--------------------cc--CHHH
Confidence 9998654 589999999999999999999994321 000000000000 00 1689
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 209 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 209 ~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
.++|+++|+|++|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....+
T Consensus 246 ~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 308 (322)
T 1mi3_A 246 KAIAAKYNKTPAEVLLRWAAQRG--IAVIPKSNL--PERLVQNRSFNTFDLTKEDFEEIAKLDIGLR 308 (322)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTTT--CEECCCCCS--HHHHHHTTSCCSSCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHcCCCHHHHHHHHHHhCC--CEEEcCCCC--HHHHHHHHhhcCCCcCHHHHHHHHhhcccCc
Confidence 99999999999999999999998 379999999 9999999999999999999999999876543
No 37
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=7.8e-48 Score=345.56 Aligned_cols=226 Identities=20% Similarity=0.275 Sum_probs=188.4
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. ..+++.+++++++||+||||||||+|+|
T Consensus 63 i~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v-~I~TK~~------~~--~~~~~~v~~~~e~SL~rLg~dyiDl~ll 133 (335)
T 3h7u_A 63 YRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDL-FITSKLW------CT--DHDPQDVPEALNRTLKDLQLEYVDLYLI 133 (335)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGC-EEEEEEC------GG--GCSTTHHHHHHHHHHHHHTCSCBSEEEE
T ss_pred CCEEECCcccCCHHHHHHHHHHHHhcCCCCccee-EEEeeeC------CC--CCCHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 79999999 44899999999863 45543 3333332 11 3578899999999999999999999999
Q ss_pred ecCCCCC-------------ccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchH
Q 022889 74 HWWDYSN-------------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 74 H~~~~~~-------------~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~ 139 (290)
|||+... .+++++|++|++|+++||||+||||||+.++++++++. .++++++|++||++.+. .+
T Consensus 134 H~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~ 211 (335)
T 3h7u_A 134 HWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TK 211 (335)
T ss_dssp CSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HH
T ss_pred cCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HH
Confidence 9996421 13799999999999999999999999999999999874 57899999999998765 58
Q ss_pred HHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCH
Q 022889 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~ 219 (290)
++++|+++||++++|+||++|.+.- . .... .. .+.+.++|+++|+|+
T Consensus 212 l~~~~~~~gI~v~a~sPL~~g~~~~--~---------~~~~--------------------~~--~~~l~~iA~~~g~t~ 258 (335)
T 3h7u_A 212 LQEFCKSKGVHLSAYSPLGSPGTTW--L---------KSDV--------------------LK--NPILNMVAEKLGKSP 258 (335)
T ss_dssp HHHHHHHHTCEEEEESTTCCTTCTT--S---------CCCG--------------------GG--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCEEEEeccCcCCCCCC--C---------Cccc--------------------cc--cHHHHHHHHHHCcCH
Confidence 9999999999999999998763210 0 0000 00 168999999999999
Q ss_pred HHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhC
Q 022889 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 220 ~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 274 (290)
+|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++....
T Consensus 259 aqvaL~w~l~~~--~~vI~g~~~--~~~l~enl~a~~~~L~~e~~~~i~~l~~~~ 309 (335)
T 3h7u_A 259 AQVALRWGLQMG--HSVLPKSTN--EGRIKENFNVFDWSIPDYMFAKFAEIEQAR 309 (335)
T ss_dssp HHHHHHHHHHTT--CEECCBCSC--HHHHHHHHCCSSCCCCHHHHHHGGGSCCCC
T ss_pred HHHHHHHHHHCC--CEEEeCCCC--HHHHHHHHhhCCCCcCHHHHHHHHhHhhcC
Confidence 999999999998 578999999 999999999999999999999999997653
No 38
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.1e-47 Score=345.09 Aligned_cols=222 Identities=15% Similarity=0.261 Sum_probs=188.5
Q ss_pred CCEeeCCC-CchHHHHHHHHhh-----hhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEee
Q 022889 1 MGSFDFVD-GPAEDLYGIFINR-----VRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~-----~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH 74 (290)
||+||||+ +.+|+.||++|++ .+|++. +|.+|++ +. ..+++.+++++++||+||||||||+|+||
T Consensus 75 i~~iDTA~~Yg~E~~vG~al~~~~~~g~~R~~v-~I~TK~~------~~--~~~~~~v~~ale~SL~rLg~dyIDl~llH 145 (344)
T 2bgs_A 75 YRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDL-FVTSKIW------CT--NLAPERVRPALENTLKDLQLDYIDLYHIH 145 (344)
T ss_dssp CCEEECCGGGTCHHHHHHHHHHHHHTTCCGGGC-EEEEEEC------GG--GCSHHHHHHHHHHHHHHHTCSCEEEEEES
T ss_pred CCEEECCCccCCHHHHHHHHHHhhhcCCCcccE-EEEeccC------CC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 79999999 4479999999986 245543 3333332 11 35799999999999999999999999999
Q ss_pred cCCCC--------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchH
Q 022889 75 WWDYS--------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 75 ~~~~~--------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~ 139 (290)
||+.. ..++.++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++.+. .+
T Consensus 146 ~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ 223 (344)
T 2bgs_A 146 WPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DK 223 (344)
T ss_dssp SSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HH
T ss_pred cCCccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HH
Confidence 99631 113799999999999999999999999999999999874 56899999999998764 58
Q ss_pred HHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCH
Q 022889 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~ 219 (290)
++++|+++||++++|+||++|- .. .+.. +.+.++|+++|+|+
T Consensus 224 ll~~~~~~gI~v~a~spL~~G~--~~-------------~~~~-----------------------~~l~~iA~~~g~s~ 265 (344)
T 2bgs_A 224 IFEACKKHGIHITAYSPLGSSE--KN-------------LAHD-----------------------PVVEKVANKLNKTP 265 (344)
T ss_dssp HHHHHHHTTCEEEEESTTCTTT--TC-------------CTTC-----------------------HHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCEEEEeCcccCCC--ch-------------hhcc-----------------------HHHHHHHHHhCCCH
Confidence 9999999999999999999881 00 0000 68899999999999
Q ss_pred HHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 220 ~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++..+.+
T Consensus 266 aqvaL~w~l~~~--~~vI~gs~~--~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~ 317 (344)
T 2bgs_A 266 GQVLIKWALQRG--TSVIPKSSK--DERIKENIQVFGWEIPEEDFKVLCSIKDEKR 317 (344)
T ss_dssp HHHHHHHHHHHT--CEECCBCSS--HHHHHHTTCCSSCCCCHHHHHHHHHSCTTCC
T ss_pred HHHHHHHHHhCC--CeEEECCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 999999999998 479999999 9999999999999999999999999987654
No 39
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=8.5e-48 Score=344.65 Aligned_cols=227 Identities=19% Similarity=0.273 Sum_probs=188.9
Q ss_pred CCEeeCCC-CchHHHHHHHHhhh------hcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEe
Q 022889 1 MGSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 73 (290)
Q Consensus 1 In~~DTA~-g~sE~~lG~~l~~~------~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~l 73 (290)
||+||||+ +.+|+.+|++|++. +|++. ++.+|+. +. ..+++.+++++++||+||||||||+|+|
T Consensus 59 i~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v-~I~TK~~------~~--~~~~~~i~~~~e~SL~rLg~dyiDl~ll 129 (331)
T 3h7r_A 59 YRHIDCASIYGNEKEIGGVLKKLIGDGFVKREEL-FITSKLW------SN--DHLPEDVPKALEKTLQDLQIDYVDLYLI 129 (331)
T ss_dssp CCEEECCGGGSCHHHHHHHHHHHHHTTSSCGGGC-EEEEEEC------GG--GCSTTHHHHHHHHHHHHHTCSCBSEEEE
T ss_pred CCEEECccccCCHHHHHHHHHHHhhcCCCCchhE-EEEEeeC------CC--CCCHHHHHHHHHHHHHHcCCCeeEEEEE
Confidence 79999999 44899999999863 56543 3333332 21 3567899999999999999999999999
Q ss_pred ecCCCC-------------CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEecccccccCCCcchH
Q 022889 74 HWWDYS-------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 74 H~~~~~-------------~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~ 139 (290)
|||+.. ..++.++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++.+. .+
T Consensus 130 H~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~ 207 (331)
T 3h7r_A 130 HWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QG 207 (331)
T ss_dssp CCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HH
T ss_pred ecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HH
Confidence 999642 123799999999999999999999999999999999874 57899999999998765 58
Q ss_pred HHHHHHHhCCceeeecccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCH
Q 022889 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~ 219 (290)
++++|+++||++++|+||++|-.. +... .... .+.+.++|+++|+|+
T Consensus 208 l~~~~~~~gI~v~a~spL~~g~~~----------------~~~~---------------~~~~--~~~l~~iA~~~g~t~ 254 (331)
T 3h7r_A 208 LHELCKSKGVHLSGYSPLGSQSKG----------------EVRL---------------KVLQ--NPIVTEVAEKLGKTT 254 (331)
T ss_dssp HHHHHHHHTCEEEEESTTSCSCTT----------------TTTH---------------HHHT--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCEEEEeCCCCCCCCC----------------CCcc---------------chhc--CHHHHHHHHHHCcCH
Confidence 999999999999999999876210 0000 0000 178999999999999
Q ss_pred HHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCC
Q 022889 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 220 ~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 275 (290)
+|+||+|++++| .++|+|+++ ++||++|+++++++||+++++.|+++.....
T Consensus 255 aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~ 306 (331)
T 3h7r_A 255 AQVALRWGLQTG--HSVLPKSSS--GARLKENLDVFDWSIPEDLFTKFSNIPQEKF 306 (331)
T ss_dssp HHHHHHHHHHTT--CEECCCCSC--HHHHHHHTCCSSCCCCHHHHGGGGGSCCCCS
T ss_pred HHHHHHHHHHCC--CEEEeCCCC--HHHHHHHHhhCCCCcCHHHHHHHHHhhhcCc
Confidence 999999999998 578999999 9999999999999999999999999986543
No 40
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=2.6e-48 Score=342.29 Aligned_cols=204 Identities=18% Similarity=0.189 Sum_probs=169.8
Q ss_pred CCEeeCCC--CchHHHHHHHHhhhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecC--
Q 022889 1 MGSFDFVD--GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW-- 76 (290)
Q Consensus 1 In~~DTA~--g~sE~~lG~~l~~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~-- 76 (290)
||+||||+ |.||+.||++|++ +|++. +|.+|+...........+++++.+++++++||+|||+||||+|+||||
T Consensus 84 i~~~DTA~~Yg~sE~~lG~al~~-~R~~v-~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~ 161 (292)
T 4exb_A 84 INLIDTAPAYGRSEERLGPLLRG-QREHW-VIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGN 161 (292)
T ss_dssp CCEEECCTTSTTHHHHHHHHHTT-TGGGC-EEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSC
T ss_pred CCEEEcCCccchHHHHHHHHhcc-CCCcE-EEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCC
Confidence 79999999 7799999999987 66654 444444322111122346789999999999999999999999999999
Q ss_pred CCCCccHH-HHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 77 DYSNPGYL-DALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 77 ~~~~~~~~-e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
+...+ .. ++|++|++|+++||||+||||||+.++++++++. |+++|++||++++.. .+++++|+++||++++|+
T Consensus 162 d~~~~-~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 162 DLDIL-ENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE---GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp HHHHH-HHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH---SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEEC
T ss_pred Ccccc-chHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh---hcEEeeccccccCCH-HHHHHHHHHCCcEEEEec
Confidence 54333 44 8999999999999999999999999999999885 899999999999876 799999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCchhhHhhhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCcee
Q 022889 156 TVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAG 235 (290)
Q Consensus 156 pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~ 235 (290)
||++|+|++ ++|+|++|+||+|++++|.+++
T Consensus 237 pL~~G~L~~-------------------------------------------------~~g~t~aqvaL~w~l~~~~v~~ 267 (292)
T 4exb_A 237 ALASGHACL-------------------------------------------------GAGQDPVRASFELVFDQPGVAA 267 (292)
T ss_dssp CSCC---------------------------------------------------------CCHHHHHHHHHHHSTTCCE
T ss_pred cccCCccCC-------------------------------------------------CCCCCHHHHHHHHHHhCCCCeE
Confidence 999997642 2789999999999999999999
Q ss_pred eeecccCCcHHHHHHhhhhhcCCCCHH
Q 022889 236 SMIGVRLGLAEHIQDTNAIFMLSLDED 262 (290)
Q Consensus 236 ~l~g~~~~~~~~l~enl~a~~~~L~~e 262 (290)
+|+|+++ ++||+||++++++.||+|
T Consensus 268 vI~g~~~--~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 268 AIVGTIN--PLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp EEECCCC--HHHHHHHHHHHHHHHC--
T ss_pred EEeCCCC--HHHHHHHHHHhhccCCCC
Confidence 9999999 999999999999888875
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.39 E-value=1.3e-07 Score=92.87 Aligned_cols=96 Identities=10% Similarity=0.067 Sum_probs=73.6
Q ss_pred HHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEE--EccCCCH---H----------------HHHH
Q 022889 56 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV--ALTNFDT---E----------------RLRI 114 (290)
Q Consensus 56 ~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~i--Gvs~~~~---~----------------~l~~ 114 (290)
++.||.+|++||+|| ++|.-+... ..+++++++++..+|+|+++ |+|++.. . ....
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~~--~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~ 307 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVAG--VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELK 307 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCHH--HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHH
T ss_pred eeccccccCCCCceE-EEECCcCcc--HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHH
Confidence 677899999999999 587655432 46889999999999999999 5554333 1 1233
Q ss_pred HHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeeccccc
Q 022889 115 ILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 115 ~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
+++.+ .++++++.||-.. ..+++.|.+.|++|++++|.++
T Consensus 308 ~i~tG-a~dv~vV~~n~i~----~~ll~~a~~~Gm~Vit~sp~~~ 347 (807)
T 3cf4_A 308 VIRSG-MPDVIVVDEQCVR----GDIVPEAQKLKIPVIASNPKIM 347 (807)
T ss_dssp HHHHT-CCSEEEECSSSCC----TTHHHHHHHTTCCEEECSTTCC
T ss_pred HhhcC-CCeEEEEEecCCC----hHHHHHHHHCCCEEEEechhhh
Confidence 34445 6899999998754 2778999999999999999876
No 42
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=93.41 E-value=3.1 Score=34.92 Aligned_cols=106 Identities=10% Similarity=0.014 Sum_probs=74.8
Q ss_pred CCCCHHHHHHHHHHHHH-hhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCee
Q 022889 45 VKMTSSIVRESIDVSRR-RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 45 ~~~~~~~i~~~~e~SL~-~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
.+++++...+..+-..+ -+++++|-|..+..+....++..+++++.+.|+++|.. -+=+++-++....++.+.+ ++
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~-Vlpy~~dd~~~akrl~~~G--~~ 158 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFD-VMVYTSDDPIIARQLAEIG--CI 158 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCE-EEEEECSCHHHHHHHHHSC--CS
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHhC--CC
Confidence 47788888888888888 88999999999888777777899999999999999975 3334566777777777655 44
Q ss_pred EecccccccCCC---cchHHHHHHHHh-CCceee
Q 022889 124 SNQVQHSVVDMR---PQQKMAELCQLT-GVKLIT 153 (290)
Q Consensus 124 ~~q~~~n~~~~~---~~~~~~~~~~~~-gi~via 153 (290)
+++..=.+.--. ...++++..++. ++.||+
T Consensus 159 aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 159 AVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp EEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred EEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE
Confidence 443322222111 123556655554 777777
No 43
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=77.88 E-value=11 Score=31.98 Aligned_cols=105 Identities=8% Similarity=0.043 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEec
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q 126 (290)
++.+. ...+=+.|..+|+++|.+-....+.. .+.+.+.++.+..+.+...++...+. .+...++.+.+.+++ .+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~--~V~ 97 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKW-VPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHAD--EIA 97 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCS--EEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccc-cccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCC--EEE
Confidence 55554 45555667889999998865544432 12234556666666665556665655 567888888887654 233
Q ss_pred cccccc--------CCCcc------hHHHHHHHHhCCceeeecc
Q 022889 127 VQHSVV--------DMRPQ------QKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 127 ~~~n~~--------~~~~~------~~~~~~~~~~gi~via~sp 156 (290)
+..+.- .+..+ .+.+++|++.|+.+.++-.
T Consensus 98 i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~ 141 (295)
T 1ydn_A 98 VFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVS 141 (295)
T ss_dssp EEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 321110 11211 3568999999999875543
No 44
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=77.36 E-value=7.2 Score=33.83 Aligned_cols=100 Identities=7% Similarity=0.036 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhhCCCcccEEEe-ecCCCCCccHHHHHHHHHHHHHcCcccEEEcc-----CCCHHHHHHHHHcC--CCee
Q 022889 52 VRESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-----NFDTERLRIILENG--IPVV 123 (290)
Q Consensus 52 i~~~~e~SL~~L~~d~iDl~~l-H~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~~~~~~--~~~~ 123 (290)
+.+..++..+..|-|.||+-.- -.|+......++....++.+++.-. --|.|- ++.++.++++++.+ ..+.
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~-vPlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG-VPLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC-SCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC-ceEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 3333444446779999998533 3454333235666777777776522 135555 56778888888854 2345
Q ss_pred EecccccccCCCcchHHHHHHHHhCCceeeeccc
Q 022889 124 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 124 ~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl 157 (290)
++-+... ...++++.+++.|.+++++.|.
T Consensus 161 INsv~~~-----~~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 161 LGNAEQE-----NYKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp EEEEBTT-----BCHHHHHHHHHHTCEEEEECSS
T ss_pred EEECCcc-----cHHHHHHHHHHhCCeEEEEccc
Confidence 5433221 1358999999999999999873
No 45
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=71.53 E-value=24 Score=30.66 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEE-----EeecCCCCCccHHHHHHHHHHHHHc-CcccEEEcc--C-CCHHHHHHHH
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDML-----QFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALT--N-FDTERLRIIL 116 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~-----~lH~~~~~~~~~~e~~~~l~~l~~~-G~ir~iGvs--~-~~~~~l~~~~ 116 (290)
.++.+...+ +-+.|.++|+|+|.+= -.-.|+. .+.....++.++++++. ..++...+. + .....++.+.
T Consensus 26 ~~~~e~k~~-i~~~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRA-IARALDKAKVDSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHH-HHHHHHHHTCSEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 456665444 4456677998888872 2212221 11123355566666654 234444442 2 2467777887
Q ss_pred HcCCCeeEecccccccCCCcchHHHHHHHHhCCceeee
Q 022889 117 ENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 117 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
+.+++...+-...|-. ..-.+.+++|++.|+.++.+
T Consensus 104 ~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 104 QAGARVVRVATHCTEA--DVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEEEEE
T ss_pred hCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEEEEE
Confidence 7775533332333322 22357899999999987765
No 46
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=68.08 E-value=39 Score=28.65 Aligned_cols=106 Identities=11% Similarity=0.126 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEe
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.++.+. ...+-+.|.++|+++|..-....|.. .+.+.+..+.+..+.+...+...++. -+...++.+++.+++...+
T Consensus 26 ~~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKW-VPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCCHHH-HHHHHHHHHHTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTTCCEEEE
T ss_pred CCCHHH-HHHHHHHHHHcCcCEEEECCCcCccc-cccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCCcCEEEE
Confidence 455554 45555677899999999976544431 12122333334444444555555555 4778888888876542221
Q ss_pred ccccccc------CCCcc------hHHHHHHHHhCCceeee
Q 022889 126 QVQHSVV------DMRPQ------QKMAELCQLTGVKLITY 154 (290)
Q Consensus 126 q~~~n~~------~~~~~------~~~~~~~~~~gi~via~ 154 (290)
-..-|-. ....+ .+.+++|++.|+.+.++
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 1111110 11111 46789999999988654
No 47
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=65.09 E-value=61 Score=27.13 Aligned_cols=101 Identities=11% Similarity=0.002 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHc-CcccEEEccCCCHHHHHHHHHc--CCCeeE
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN--GIPVVS 124 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~--~~~~~~ 124 (290)
+.+.+.+..++.. .-|-|.||+-.--.. ....+.+...++.+++. +. -|.|-++.++.++++++. |.+ .+
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~---~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~-iI 104 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTA---DDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHA-MI 104 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCS---SCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCC-EE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCc---hhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCC-EE
Confidence 4566666665555 689999998554311 12256677777777765 43 478889999999999986 532 22
Q ss_pred ecccccccCCCcc--hHHHHHHHHhCCceeeecccccc
Q 022889 125 NQVQHSVVDMRPQ--QKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~~~~--~~~~~~~~~~gi~via~spl~~G 160 (290)
|-+ |. ..+ .++++.+++.|++++.+..-.+|
T Consensus 105 Ndv--s~---~~d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 105 NST--SA---DQWKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp EEE--CS---CHHHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred EEC--CC---CccccHHHHHHHHHcCCCEEEEecCCCC
Confidence 211 22 113 57999999999999998753344
No 48
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=64.39 E-value=38 Score=27.38 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHhhC-CCceeeeecccCCcHHHHHHhhhhhc
Q 022889 217 VSIPVVAVRYILDQ-PAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 217 ~s~~q~al~~~l~~-~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
.|-.++|++|++.+ +.-..++.|+.-+..+|.-.|+..+-
T Consensus 73 ~TD~e~Al~~a~~~~~~~~I~i~Ga~GGR~DH~lani~lL~ 113 (218)
T 3ihk_A 73 DTDTELALKTIFDCFGRVEIIVFGAFGGRIDHMLSNIFLPS 113 (218)
T ss_dssp SCHHHHHHHHHHHHTSSCEEEEESCSSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCCEEEEECCCCCchhhHHHHHHHHH
Confidence 46788999999987 55567889999888999999988764
No 49
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=64.35 E-value=35 Score=29.15 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEe
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.++.+. +..+-+.|.++|+++|.+-..-.|.. .+.+.+..+.+..+.+...++..++. -+...++.+.+.+.+...+
T Consensus 24 ~~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g~~~v~i 100 (307)
T 1ydo_A 24 WIATED-KITWINQLSRTGLSYIEITSFVHPKW-IPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGGINEACV 100 (307)
T ss_dssp CCCHHH-HHHHHHHHHTTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHTCSEEEE
T ss_pred CCCHHH-HHHHHHHHHHcCCCEEEECCCcCccc-ccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCCcCEEEE
Confidence 345554 45566678899999999987655532 12122233334444444556666666 3677888888866543222
Q ss_pred ccccccc------CCCcc------hHHHHHHHHhCCceeee
Q 022889 126 QVQHSVV------DMRPQ------QKMAELCQLTGVKLITY 154 (290)
Q Consensus 126 q~~~n~~------~~~~~------~~~~~~~~~~gi~via~ 154 (290)
-...|-. .+..+ .+.++++++.|+.+.++
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 2222211 11111 36788999999988654
No 50
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=62.16 E-value=43 Score=27.10 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 217 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 217 ~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
.|-.++||+|++.++.-..++.|+.-+..+|.-.|+..+
T Consensus 79 ~TD~e~Al~~a~~~g~~~I~i~Ga~GgR~DH~lani~ll 117 (222)
T 3lm8_A 79 QTDLDLALDWALEKQPDIIQIFGITGGRADHFLGNIQLL 117 (222)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEESCCCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 567889999999887777888999988888888887765
No 51
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=61.93 E-value=47 Score=26.92 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 217 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 217 ~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
.|-.++||+|++.++.-..++.|+.-+..+|.-.|+..+
T Consensus 78 ~TD~e~Al~~a~~~g~~~I~i~Ga~GGR~DH~lani~lL 116 (223)
T 3k94_A 78 KTDMEIALDWAVEQTARCIRLFGATGGRLDHLFGNVELL 116 (223)
T ss_dssp BCHHHHHHHHHHTTCCSEEEEESCSSSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 567889999999988778889999988899988888765
No 52
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=61.56 E-value=88 Score=27.79 Aligned_cols=106 Identities=15% Similarity=0.064 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHc------CcccEEEccCCCHHHHHHHHHcCC
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE------GKIKTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~ 120 (290)
++.+...+-+ +.|+.++.. +++ +|..|-.... -.+-++.+.+|.++ +.--..|=+.++.+.+..+++.+
T Consensus 249 ~~~~~A~~~~-~~L~~~~~~-~~l-~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~- 323 (413)
T 1kko_A 249 MDPVRCAEYI-ASLEKEAQG-LPL-YIEGPVDAGN-KPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAG- 323 (413)
T ss_dssp TCHHHHHHHH-HHTGGGGTT-SCE-EEECCCCCSS-HHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTT-
T ss_pred CCHHHHHHHH-HHHHhccCC-cce-EEECCcCCCC-CcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhC-
Confidence 4555543332 334444432 665 8888864221 24556777777765 33345566677899999988754
Q ss_pred CeeEecccccccCC-CcchHHHHHHHHhCCceeeeccc
Q 022889 121 PVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 121 ~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
-++++|+..+-+-. ..-..+...|+++|+.++..+..
T Consensus 324 a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 324 SCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp CCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 57888888776422 12247899999999999998764
No 53
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=60.08 E-value=46 Score=26.92 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHhhCCCc-eeeeecccCCcHHHHHHhhhhhc
Q 022889 217 VSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 217 ~s~~q~al~~~l~~~~v-~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
.|-.++||.++..++.- ..++.|+.-+..+|.-.|+..+-
T Consensus 77 ~TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~lL~ 117 (222)
T 3mel_A 77 DTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPF 117 (222)
T ss_dssp SCHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHHHHH
Confidence 46678899999887664 67888998888999988887764
No 54
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=59.83 E-value=50 Score=26.07 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHc-CcccEEEccCC--CHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 83 YLDALNHLTDLKEE-GKIKTVALTNF--DTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 83 ~~e~~~~l~~l~~~-G~ir~iGvs~~--~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
.-+++.+|.++++. ++|.-+|..|. ....+..++. .++.+..|+- ...-...+..+++.|+.++.-.
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~----~~i~~~~~~~--~~e~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG----VKIKEFLFSS--EDEITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT----CEEEEEEECS--GGGHHHHHHHHHHTTCCEEEEC
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC----CceEEEEeCC--HHHHHHHHHHHHHCCCeEEECC
Confidence 57899999999986 56777788775 3456666653 2344444432 2223578999999999987743
No 55
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=58.93 E-value=39 Score=29.02 Aligned_cols=106 Identities=10% Similarity=-0.089 Sum_probs=61.0
Q ss_pred HHHHHhhhhcCCCCceeeeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHH
Q 022889 15 YGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLK 94 (290)
Q Consensus 15 lG~~l~~~~r~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~ 94 (290)
+...++..+.... .+++++.+.+........-+++.+..++..-+..-+.|.||+=+=+ + .. .....++|..|+
T Consensus 63 ~~~~I~~~q~~G~-kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~-~---~~-~d~~~~aL~~l~ 136 (311)
T 2dsk_A 63 FVDEVRELREIGG-EVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEA-G---ID-ADKLADALLIVQ 136 (311)
T ss_dssp GHHHHHHHHTTTC-EEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECS-C---CC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC-eEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccC-C---cc-HHHHHHHHHHHH
Confidence 3444554433333 6777776654211001134778888889999999999999973332 2 12 246777888888
Q ss_pred HcC--cccEE--Ecc-----CCCHHHHHHHHHcCCCeeEec
Q 022889 95 EEG--KIKTV--ALT-----NFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 95 ~~G--~ir~i--Gvs-----~~~~~~l~~~~~~~~~~~~~q 126 (290)
+++ +.-.+ .+. ......|..+...+..++.+-
T Consensus 137 ~~~p~~~vs~TL~~~p~gl~~~g~~~l~~a~~~g~~ld~Vn 177 (311)
T 2dsk_A 137 RERPWVKFSFTLPSDPGIGLAGGYGIIETMAKKGVRVDRVN 177 (311)
T ss_dssp HHSTTCEEEEEEEEETTTEESTHHHHHHHHHHHTCCCCEEE
T ss_pred hhCCCcEEEEEeccCCCCCCcchHHHHHHHHHcCccccEEE
Confidence 764 33233 222 222356777766665555544
No 56
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=52.80 E-value=83 Score=26.78 Aligned_cols=103 Identities=11% Similarity=-0.005 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHH-----cCcccEEEccCCCHHHHHHHHH--cCC
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKE-----EGKIKTVALTNFDTERLRIILE--NGI 120 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~-----~G~ir~iGvs~~~~~~l~~~~~--~~~ 120 (290)
+.+.+.+..++.+ .-|-|.||+=. ... ... -++.+.-+..+++ .+. -|.|-++.++.++++++ .|
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g~~-~v~-~~eem~rvv~~i~~~~~~~~v--pisIDT~~~~V~eaaL~~~~G- 106 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--DDG-LLD-ARTEMTTFLNLIMSEPEIARV--PVMIDSSKWEVIEAGLKCLQG- 106 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--CCT-TSC-HHHHHHHHHHHHHTCHHHHTS--CEEEECSCHHHHHHHHHHCSS-
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--CCC-CCC-HHHHHHHHHHHHHHhhhcCCC--eEEEeCCCHHHHHHHHHhcCC-
Confidence 5566666666655 57899999965 111 122 3333333333333 122 57888999999999998 45
Q ss_pred CeeEecccccccCCCc-chHHHHHHHHhCCceeeecccccc
Q 022889 121 PVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~via~spl~~G 160 (290)
...+|-+ |.....+ -.++++.+++.|.+++.+.--..|
T Consensus 107 a~iINdI--s~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 107 KSIVNSI--SLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp CCEEEEE--CSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred CCEEEeC--CcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 3333332 3221111 127899999999999998754444
No 57
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=51.67 E-value=61 Score=28.54 Aligned_cols=83 Identities=7% Similarity=0.001 Sum_probs=55.5
Q ss_pred EEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCC
Q 022889 71 LQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGV 149 (290)
Q Consensus 71 ~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi 149 (290)
.++..|-... -++.+.++++.-.|-= |=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+
T Consensus 218 ~~iEqP~~~~-----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~ia~~A~~~gi 290 (391)
T 3gd6_A 218 EMIESPAPRN-----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKD-AIDIFNISPVFIGGLTSAKKAAYAAEVASK 290 (391)
T ss_dssp CEEECCSCTT-----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred ceecCCCChh-----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcC-CCCEEEECchhcCCHHHHHHHHHHHHHcCC
Confidence 5566664321 2456667776655543 87888898888888754 57777777655311 112478999999999
Q ss_pred ceeeecccccc
Q 022889 150 KLITYGTVMGG 160 (290)
Q Consensus 150 ~via~spl~~G 160 (290)
.++..+.+.+|
T Consensus 291 ~~~~~~~~es~ 301 (391)
T 3gd6_A 291 DVVLGTTQELS 301 (391)
T ss_dssp EEEECCCCCCH
T ss_pred EEEecCCCccH
Confidence 99987766554
No 58
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=50.25 E-value=1.3e+02 Score=26.10 Aligned_cols=73 Identities=10% Similarity=0.034 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+|++.-.| -+.|=|-++.+.+..+++.+ -++++|+...-+-. ..-..+...|+.+||.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDR-SVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTT-CCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcC-CCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 4556677776554 35566667888888888744 47777777654311 11247888999999999887776554
No 59
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=49.42 E-value=1.2e+02 Score=25.52 Aligned_cols=103 Identities=14% Similarity=0.039 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEee-cCCCC----CccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCC
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS----NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH-~~~~~----~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~ 120 (290)
..+.+.+.+..++.+ .-|-|.||+---- .|... ...+..+...++.+++++. -|.|-++.++.++++++.|.
T Consensus 25 ~~~~~~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa 101 (280)
T 1eye_A 25 YLDLDDAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGA 101 (280)
T ss_dssp CCSHHHHHHHHHHHH-HTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCC
Confidence 346777777665444 5689999997421 23211 1125667788888887754 58888999999999999764
Q ss_pred CeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 121 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+ .+|- .|... ...++++.+++.|++++.+..
T Consensus 102 ~-iINd--vsg~~--~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 102 Q-MVND--VSGGR--ADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp C-EEEE--TTTTS--SCTTHHHHHHHHTCCEEEECC
T ss_pred C-EEEE--CCCCC--CCHHHHHHHHHhCCeEEEEcC
Confidence 3 2222 22221 145899999999999999874
No 60
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=46.75 E-value=69 Score=28.44 Aligned_cols=87 Identities=8% Similarity=-0.003 Sum_probs=55.8
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCCC--cchHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR--PQQKMAEL 143 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~--~~~~~~~~ 143 (290)
-.+++++-.|-... -++.+.+|+++-.| -+.|=|-++.+.+..+++.+ -++++|....- .. .-..+...
T Consensus 257 ~~~l~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~div~~d~~~--GGit~~~kia~~ 328 (412)
T 4h1z_A 257 PHGLWFAEAPVRTE-----DIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARR-ALAIVQPEMGH--KGITQFMRIGAY 328 (412)
T ss_dssp GGCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTT-CCSEECCCHHH--HHHHHHHHHHHH
T ss_pred ccccceecCCCCcc-----chHHHHHHHhhcCCccccCCcccchHhHHHHHHcC-CCCEEEecCCC--CChHHHHHHHHH
Confidence 34556666664322 24556666665443 45566778888888888744 46777776431 11 12467889
Q ss_pred HHHhCCceeeeccccccc
Q 022889 144 CQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 144 ~~~~gi~via~spl~~G~ 161 (290)
|+.+|+.++..++++.|+
T Consensus 329 A~~~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 329 AHVHHIKVIPHATIGAGI 346 (412)
T ss_dssp HHHTTCEECCCCCSSCSH
T ss_pred HHHCCCcEEecCCcchHH
Confidence 999999999988876653
No 61
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=46.19 E-value=1.1e+02 Score=24.29 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=55.3
Q ss_pred EEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH--cCCCeeEecccccccC---CCcchHHHHHH
Q 022889 70 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE--NGIPVVSNQVQHSVVD---MRPQQKMAELC 144 (290)
Q Consensus 70 l~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~--~~~~~~~~q~~~n~~~---~~~~~~~~~~~ 144 (290)
++|+..|...+ .+++++...+-.++.-|++|=|++.+.+....+.+ .++.+.++--.+..-. +....+..+..
T Consensus 17 ~~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L 94 (201)
T 1vp8_A 17 IVYFNKPGREN--TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL 94 (201)
T ss_dssp CEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 35555555433 45666555554445459999999888777666665 2445555444433321 22346899999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
++.|+.++..+=+-.|
T Consensus 95 ~~~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 95 RKRGAKIVRQSHILSG 110 (201)
T ss_dssp HHTTCEEEECCCTTTT
T ss_pred HhCCCEEEEEeccccc
Confidence 9999999987654444
No 62
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=46.16 E-value=1e+02 Score=25.47 Aligned_cols=73 Identities=11% Similarity=-0.007 Sum_probs=41.3
Q ss_pred ccEEEeecCCCCCc-cHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHH-cC-CCeeEecccccccCCCcchHHHHHH
Q 022889 68 LDMLQFHWWDYSNP-GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE-NG-IPVVSNQVQHSVVDMRPQQKMAELC 144 (290)
Q Consensus 68 iDl~~lH~~~~~~~-~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~-~~-~~~~~~q~~~n~~~~~~~~~~~~~~ 144 (290)
.|++-|--|..+.. |-.-+-.+-.+..+.|- +...+-.+++ .. --|.+.+..||++.+...+..+..|
T Consensus 42 aD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~---------~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~ 112 (252)
T 3tha_A 42 IDILELGVAYSDPIADGEIIADAAKIALDQGV---------DIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKFVKKA 112 (252)
T ss_dssp CSEEEEECCCSCCCSCCCHHHHHHHHHHHTTC---------CHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHCCC---------CHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHHHHHH
Confidence 55666655532110 11223334445555544 4444444443 11 1478899999988665556788889
Q ss_pred HHhCC
Q 022889 145 QLTGV 149 (290)
Q Consensus 145 ~~~gi 149 (290)
++.|+
T Consensus 113 ~~aGv 117 (252)
T 3tha_A 113 KSLGI 117 (252)
T ss_dssp HHTTE
T ss_pred HHcCC
Confidence 99886
No 63
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=45.80 E-value=1.3e+02 Score=25.51 Aligned_cols=100 Identities=11% Similarity=0.121 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHhhCCCcccEEEee-cCCCCCccHH----HHHHHHHHHHHc-CcccEEEccCCCHHHHHHHHHcCCCe
Q 022889 49 SSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPGYL----DALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 49 ~~~i~~~~e~SL~~L~~d~iDl~~lH-~~~~~~~~~~----e~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
.+.+.+..++.+ .-|-|.||+---- .|.....+.+ .+...++.++++ +. -|.|-++.++.++++++.|..+
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 455555555444 5788999986432 2432211122 344455666654 44 4788899999999999876332
Q ss_pred eEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
. +..|..+ ...++++.+++.|++++.+..
T Consensus 139 I---Ndvsg~~--~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I---NDIWGAK--AEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E---EETTTTS--SCTHHHHHHHHHTCCEEEECC
T ss_pred E---EECCCCC--CCHHHHHHHHHhCCcEEEEeC
Confidence 2 2233322 145899999999999999875
No 64
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=45.43 E-value=66 Score=28.03 Aligned_cols=85 Identities=8% Similarity=0.012 Sum_probs=55.5
Q ss_pred cEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCCC-cchHHHHHHHH
Q 022889 69 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-PQQKMAELCQL 146 (290)
Q Consensus 69 Dl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~ 146 (290)
++.++..|-... -++.+.++++.-.| -..|=+-++.+.+..+++.+ .++++|+..+-+ .- .-..+...|++
T Consensus 212 ~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~-Git~~~~ia~~A~~ 284 (367)
T 3dg3_A 212 DLLFAEELCPAD-----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGG-SATAISIKTART-GFTGSTRVHHLAEG 284 (367)
T ss_dssp CCSCEESCSCTT-----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHT-SCSEEEECHHHH-TTHHHHHHHHHHHH
T ss_pred CCCEEECCCCcc-----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeehhhh-hHHHHHHHHHHHHH
Confidence 344556664321 24556667665444 34555667888888888754 578888876654 32 22478999999
Q ss_pred hCCceeeecccccc
Q 022889 147 TGVKLITYGTVMGG 160 (290)
Q Consensus 147 ~gi~via~spl~~G 160 (290)
+|+.++..+.+.++
T Consensus 285 ~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 285 LGLDMVMGNQIDGQ 298 (367)
T ss_dssp HTCEEEECCSSCCH
T ss_pred cCCeEEECCcCCcH
Confidence 99999987766554
No 65
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=45.40 E-value=1.3e+02 Score=24.97 Aligned_cols=30 Identities=13% Similarity=0.051 Sum_probs=20.2
Q ss_pred eeEecccccccCCCcchHHHHHHHHhCCce
Q 022889 122 VVSNQVQHSVVDMRPQQKMAELCQLTGVKL 151 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v 151 (290)
|.+.+..||++.+......++.|++.|+--
T Consensus 97 Pivlm~Y~npv~~~g~e~f~~~~~~aGvdg 126 (267)
T 3vnd_A 97 PIGLLLYANLVFANGIDEFYTKAQAAGVDS 126 (267)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCE
Confidence 455667778765544557788888888744
No 66
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=45.20 E-value=15 Score=23.03 Aligned_cols=18 Identities=28% Similarity=0.387 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHcCccc
Q 022889 83 YLDALNHLTDLKEEGKIK 100 (290)
Q Consensus 83 ~~e~~~~l~~l~~~G~ir 100 (290)
-++++.+|..|.++|+|+
T Consensus 39 kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp HHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHCCCee
Confidence 589999999999999986
No 67
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=44.50 E-value=65 Score=28.42 Aligned_cols=87 Identities=9% Similarity=0.047 Sum_probs=57.7
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHc-CcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
-+++.++..|-.... ++.+.++.+. +.--+.|=|-++.+.+..+++.+ .++++|+..+- -. ..-..+...|
T Consensus 215 ~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~-a~d~v~~k~~~-GGit~~~~i~~~A 287 (389)
T 3s5s_A 215 GADVALLEQPVPRDD-----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAER-AATVVNIKLMK-GGIAEALDIAAVA 287 (389)
T ss_dssp TCEEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHH-HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC-CCCEEEecCCC-CCHHHHHHHHHHH
Confidence 457788888764322 3445556554 33356677778888888888744 47777777654 11 1124678999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
+.+|+.++..+.+.++
T Consensus 288 ~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 288 RAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHTTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999998877554
No 68
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=44.10 E-value=75 Score=27.66 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=57.1
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
-+++.++..|-... -++.+.+++++-.| -+.|=|-++.+.+..+++.+ .++++|+..+- -. ..-..+...|
T Consensus 214 ~~~i~~iEeP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~-GGit~~~~i~~~A 286 (365)
T 3ik4_A 214 SIPMVLFEQPLPRE-----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREG-TASVINIKLMK-AGVAEGLKMIAIA 286 (365)
T ss_dssp TCCEEEEECCSCTT-----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHT-CCSEEEECHHH-HCHHHHHHHHHHH
T ss_pred CCCceEEECCCCcc-----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhC-CCCEEEEcCCc-cCHHHHHHHHHHH
Confidence 35677787775432 24455566654333 45666678888888887644 47777777654 11 1124678999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
+.+|+.++..+.+..+
T Consensus 287 ~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 287 QAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999998877554
No 69
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=43.04 E-value=1.4e+02 Score=24.65 Aligned_cols=100 Identities=14% Similarity=0.017 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc--CCCeeEe
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~ 125 (290)
+.+.+.+..++.+ .-|-|.||+-. .... ....++.-..+..+.+. .=.-|.|-++.++.++++++. |. ..+|
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~~~-v~~~ee~~rvv~~i~~~-~~~pisIDT~~~~v~~aAl~a~~Ga-~iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GPAV-QDKVSAMEWLVEVTQEV-SNLTLCLDSTNIKAIEAGLKKCKNR-AMIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHHHCSSC-EEEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CCCC-CChHHHHHHHHHHHHHh-CCCeEEEeCCCHHHHHHHHhhCCCC-CEEE
Confidence 5566666665555 57899999965 1111 12123333333333332 112578889999999999985 52 2222
Q ss_pred cccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 126 QVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 126 q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
- .|.. ..+.+++++.+++.|++++.+..
T Consensus 97 d--vs~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 S--TNAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp E--ECSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred E--CCCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 1 2222 11112799999999999999875
No 70
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=42.22 E-value=63 Score=28.45 Aligned_cols=87 Identities=14% Similarity=0.067 Sum_probs=57.5
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-.... ++.+.++.++-.| -..|=|-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|+
T Consensus 227 ~~i~~iEqP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~~GGit~~~~ia~~A~ 300 (393)
T 1wuf_A 227 YDLEMIEQPFGTKD-----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIG-SCRAINLKLARVGGMSSALKIAEYCA 300 (393)
T ss_dssp GTCSEEECCSCSSC-----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHT-CCSEEEECTGGGTSHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCcC-----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhC-CCCEEEeChhhhCCHHHHHHHHHHHH
Confidence 56677777754322 3455666665443 34555667889999888754 47888887765411 11247888999
Q ss_pred HhCCceeeecccccc
Q 022889 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
++|+.++..+.+..|
T Consensus 301 ~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 301 LNEILVWCGGMLEAG 315 (393)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999887766554
No 71
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=41.36 E-value=1.2e+02 Score=26.27 Aligned_cols=86 Identities=8% Similarity=-0.030 Sum_probs=54.5
Q ss_pred cEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHH
Q 022889 69 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQL 146 (290)
Q Consensus 69 Dl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~ 146 (290)
++.++..|-... -++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.
T Consensus 215 ~i~~iEqP~~~~-----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 215 GVELIEQPVGRE-----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDR-SVDVFSLKLCNMGGVSATQKIAAVAEA 288 (370)
T ss_dssp TEEEEECCSCTT-----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTT-SCSEEEECTTTSCSHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcc-----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHHHHHH
Confidence 455566664321 24556666665433 34455567888888888744 57888887665311 122478899999
Q ss_pred hCCceeeecccccc
Q 022889 147 TGVKLITYGTVMGG 160 (290)
Q Consensus 147 ~gi~via~spl~~G 160 (290)
+|+.++..+.+.+|
T Consensus 289 ~g~~~~~~~~~es~ 302 (370)
T 1chr_A 289 SGIASYGGTMLDST 302 (370)
T ss_dssp HTCEEEECCSCCTT
T ss_pred cCCeEEecCCCccH
Confidence 99999987766554
No 72
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=40.83 E-value=1.4e+02 Score=23.83 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=56.7
Q ss_pred EEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCC--CeeEecccccccC---CCcchHHHHHH
Q 022889 70 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI--PVVSNQVQHSVVD---MRPQQKMAELC 144 (290)
Q Consensus 70 l~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~--~~~~~q~~~n~~~---~~~~~~~~~~~ 144 (290)
++|+..|...+ .+++++...+-.++.-|++|=|++.+.+....+.+ .. .+.++--.+..-. +....+..+..
T Consensus 25 i~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e-~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L 101 (206)
T 1t57_A 25 ICYFEEPGKEN--TERVLELVGERADQLGIRNFVVASVSGETALRLSE-MVEGNIVSVTHHAGFREKGQLELEDEARDAL 101 (206)
T ss_dssp EEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHT-TCCSEEEEECCCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHH-HccCCEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 56776776544 46666555554445459999999988888777776 22 4444443333211 22346899999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
++.|+.++..+=+-.|
T Consensus 102 ~~~G~~V~t~tH~lsG 117 (206)
T 1t57_A 102 LERGVNVYAGSHALSG 117 (206)
T ss_dssp HHHTCEEECCSCTTTT
T ss_pred HhCCCEEEEeeccccc
Confidence 9999999886644343
No 73
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=40.66 E-value=23 Score=22.33 Aligned_cols=27 Identities=26% Similarity=0.273 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhh
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYILD 229 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l~ 229 (290)
.+.+.++.+..+.|+|..++|-+--.+
T Consensus 13 ~~~~~l~~~r~~~g~s~~~lA~~~gis 39 (74)
T 1y7y_A 13 KFGQRLRELRTAKGLSQETLAFLSGLD 39 (74)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcC
Confidence 344788888888999999888665433
No 74
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=40.34 E-value=1.5e+02 Score=25.60 Aligned_cols=84 Identities=11% Similarity=0.106 Sum_probs=54.3
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-... -++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+
T Consensus 209 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~GGit~~~~i~~~A~ 282 (354)
T 3jva_A 209 YQIELVEQPVKRR-----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKG-TVDVINIKLMKCGGIHEALKINQICE 282 (354)
T ss_dssp SCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCChh-----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcC-CCCEEEECchhcCCHHHHHHHHHHHH
Confidence 5566677665422 24556666665443 34445567888888887744 57777777654311 11247899999
Q ss_pred HhCCceeeeccc
Q 022889 146 LTGVKLITYGTV 157 (290)
Q Consensus 146 ~~gi~via~spl 157 (290)
.+|+.++..+.+
T Consensus 283 ~~gi~~~~~~~~ 294 (354)
T 3jva_A 283 TAGIECMIGCMA 294 (354)
T ss_dssp HTTCEEEECCCT
T ss_pred HcCCeEEecCCC
Confidence 999999988877
No 75
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=40.33 E-value=56 Score=27.34 Aligned_cols=105 Identities=12% Similarity=0.017 Sum_probs=67.1
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCee
Q 022889 45 VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 45 ~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
...+.+...+..+-..+-+||+.|.|=.+.......++..+++++.+.|+++|.. -.+ ++.++...+++.+.+ ++
T Consensus 72 G~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy--~~~D~~~ak~l~~~G--~~ 147 (268)
T 2htm_A 72 GARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPY--MGPDLVLAKRLAALG--TA 147 (268)
T ss_dssp TCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCE--ECSCHHHHHHHHHHT--CS
T ss_pred CCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeec--cCCCHHHHHHHHhcC--CC
Confidence 3568888888777788889999988666655555566789999999999999954 312 245666666666544 44
Q ss_pred EecccccccCCC--c-chHHHHHHHH-h-C-Cceee
Q 022889 124 SNQVQHSVVDMR--P-QQKMAELCQL-T-G-VKLIT 153 (290)
Q Consensus 124 ~~q~~~n~~~~~--~-~~~~~~~~~~-~-g-i~via 153 (290)
+++..=+++=-. . ...+++...+ . + +.||+
T Consensus 148 aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~ 183 (268)
T 2htm_A 148 TVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV 183 (268)
T ss_dssp CBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE
T ss_pred EEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE
Confidence 443322222110 0 1344666655 2 5 77876
No 76
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=40.19 E-value=72 Score=27.85 Aligned_cols=73 Identities=4% Similarity=-0.051 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCcccEE-EccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.|-=+ +=+-++.+.++.+++.+ ..+++|+..+-+-. ..-..+...|+++|+.++..+.+..+
T Consensus 226 ~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 226 YEECQQVRRVADQPMKLDECVTGLHMAQRIVADR-GAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHT-CCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 4555666655444222 22345677777777644 46777777665311 11247888999999999998655444
No 77
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=40.16 E-value=73 Score=28.03 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.|- ..|=+-++.+.++.+++.+ ..+++|+..+-+-. ..-..+...|+++|+.++..+.+.+|
T Consensus 229 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 229 LDGMARLRGKVATPIYADESAQELHDLLAIINKG-AADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 45556666554332 2333445677777777644 46777776554311 11246888999999999998766554
No 78
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=40.01 E-value=79 Score=27.88 Aligned_cols=86 Identities=12% Similarity=0.025 Sum_probs=55.0
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++.++..|-... -++.+.++.+.-.| -+.|=|-++.+.+..+++.+ .++++|+..+- -. ..-..+...|+
T Consensus 245 ~~i~~iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~i~~k~~~-GGit~~~~ia~~A~ 317 (393)
T 3u9i_A 245 IVPALFEQPVAKD-----DEEGLRRLTATRRVPVAADESVASATDAARLARNA-AVDVLNIKLMK-CGIVEALDIAAIAR 317 (393)
T ss_dssp CCCSEEECCSCTT-----CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECHHH-HCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcC-CCCEEEecccc-cCHHHHHHHHHHHH
Confidence 4556666664321 13445556554333 46667778888888887744 47777777654 11 11246789999
Q ss_pred HhCCceeeecccccc
Q 022889 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
.+|+.++..+.+.++
T Consensus 318 ~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 318 TAGLHLMIGGMVESL 332 (393)
T ss_dssp HHTCEEEECCSSCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999988776554
No 79
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=39.95 E-value=48 Score=29.12 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEE-EccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.+++++-.|-=+ +=+-++.+.++.+++.+ ..++
T Consensus 218 ~~~~~~a~~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~ 285 (388)
T 2nql_A 218 NQTPERALELIAE-MQPFDPWFA-----EAPVWT-----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERC-RIAI 285 (388)
T ss_dssp CSCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTS-CCSE
T ss_pred CCCHHHHHHHHHH-HhhcCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCE
Confidence 3455554444443 555555433 344321 235556666665444322 33345778888887643 4677
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
+|+..+- -. ..-..+...|+++|+.++..+.+..+
T Consensus 286 v~ik~~~-GGit~~~~i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 286 VQPEMGH-KGITNFIRIGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp ECCCHHH-HCHHHHHHHHHHHHHHTCEECCCCCSSCS
T ss_pred EEecCCC-CCHHHHHHHHHHHHHcCCeEEeecCCCcH
Confidence 7776553 11 11247789999999999887655444
No 80
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=39.87 E-value=1.8e+02 Score=25.02 Aligned_cols=73 Identities=10% Similarity=0.026 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.|- ..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 228 FGALRRLTEQNGVAILADESLSSLSSAFELARDH-AVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC-CCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 44555565543332 2233446777777777643 46777776554311 11247888999999999988766544
No 81
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=39.52 E-value=1.1e+02 Score=26.05 Aligned_cols=96 Identities=8% Similarity=0.013 Sum_probs=62.6
Q ss_pred HHHHHHHHHhhCCCcccEEEe-ecCCCCCccHHHHHHHHHHHHHc-CcccEEEc-cC----CCHHHHHHHHHcCC--Cee
Q 022889 53 RESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEE-GKIKTVAL-TN----FDTERLRIILENGI--PVV 123 (290)
Q Consensus 53 ~~~~e~SL~~L~~d~iDl~~l-H~~~~~~~~~~e~~~~l~~l~~~-G~ir~iGv-s~----~~~~~l~~~~~~~~--~~~ 123 (290)
.+..++.. ..|-|.||+=.- -.|+......++.+..++.+++. +.. |.| -+ ++++.++++++.+- ++-
T Consensus 77 ~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~i 153 (310)
T 2h9a_B 77 VAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNCL 153 (310)
T ss_dssp HHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCCE
Confidence 33333444 789999998664 23543322367777788888776 544 455 45 67888998888542 233
Q ss_pred EecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 124 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 124 ~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+|-+.- . ...++++.|++.|.+++.+.+
T Consensus 154 INdvs~--~---~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 154 LSSATK--D---NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp EEEECT--T---THHHHHHHHHHHTCEEEEECS
T ss_pred EEECCC--C---ccHHHHHHHHHhCCCEEEECh
Confidence 333321 1 245899999999999999886
No 82
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=39.30 E-value=47 Score=28.05 Aligned_cols=106 Identities=11% Similarity=0.070 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEe
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.++.+... .+-+.|.++|+++|.+-....|... +.+.+..+.+..+++...++..++. .+...++.+.+.+.+...+
T Consensus 23 ~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 23 IVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWV-PQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCCHHHHH-HHHHHHHHTTCSEECCEECCCTTTC-GGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHH-HHHHHHHHcCcCEEEECCCcCcccc-cccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCCCCEEEE
Confidence 35666544 5666788999999999765554311 1122223333333333233333433 4677888888876543332
Q ss_pred ccccccc------CCCc------chHHHHHHHHhCCceeee
Q 022889 126 QVQHSVV------DMRP------QQKMAELCQLTGVKLITY 154 (290)
Q Consensus 126 q~~~n~~------~~~~------~~~~~~~~~~~gi~via~ 154 (290)
-..-|-. .+.. -.+.++++++.|+.+.++
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 2222211 1111 135788999999988654
No 83
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=38.25 E-value=96 Score=27.12 Aligned_cols=73 Identities=11% Similarity=0.003 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.| -..|=|-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|+.+|+.++..+.+.+|
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQG-FTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 4455556554333 44455667778888777643 46777776554311 22347889999999999887766554
No 84
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=38.23 E-value=97 Score=26.71 Aligned_cols=99 Identities=7% Similarity=-0.019 Sum_probs=57.5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEE-EccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+...+-++. |+.++.++| ..|-.. +-++.+.++++.-.|-=+ +=+-++.+.++.+++.+ .+++
T Consensus 199 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~-~~d~ 266 (359)
T 1mdl_A 199 SLDVPAAIKRSQA-LQQEGVTWI-----EEPTLQ-----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIG-ACRL 266 (359)
T ss_dssp CSCHHHHHHHHHH-HHHHTCSCE-----ECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHHhCCCeE-----ECCCCh-----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcC-CCCE
Confidence 3455544444333 556655533 344321 235556666665444333 33345778888887744 5778
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
+|+..+-+-. ..-..+...|+++|+.++..+.
T Consensus 267 v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~ 299 (359)
T 1mdl_A 267 AMPDAMKIGGVTGWIRASALAQQFGIPMSSHLF 299 (359)
T ss_dssp ECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBSC
T ss_pred EeecchhhCCHHHHHHHHHHHHHcCCeEeeccH
Confidence 8877665311 1124788899999999888753
No 85
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=38.21 E-value=46 Score=28.03 Aligned_cols=47 Identities=6% Similarity=0.081 Sum_probs=39.0
Q ss_pred HHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeeccc
Q 022889 109 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 109 ~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl 157 (290)
.+.++.+.+.++.-.++|-.-|++-+ .++++++|.++||.+++..|=
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~--~~~~i~~a~~~gi~~~~~~~~ 280 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVD--REAVIAAADDLGLFVLGVDPQ 280 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETT--HHHHHHHHHHHTCEEEEECC-
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeC--HHHHHHHHHHcCCEEEEeCCC
Confidence 58888888888887788999998633 358999999999999998763
No 86
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=38.19 E-value=84 Score=20.64 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHH
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVN 265 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~ 265 (290)
.....|+..|..+|.|..+.....+-..-.. +|.+ .+.+.++-..+.+..-.+++-|+
T Consensus 12 ev~~~L~~rAa~~G~S~~~ylr~~Le~~a~~----~~~~-~~~~~l~r~~~~~~dl~D~~~m~ 69 (73)
T 3h87_C 12 DVLASLDAIAARLGLSRTEYIRRRLAQDAQT----ARVT-VTAADLRRLRGAVAGLGDPELMR 69 (73)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHTS----CCCC-CCHHHHHHHHHHSGGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC----Cccc-ccHHHHHHHHHHHcccCCHHHHH
Confidence 3458999999999999999888777552211 3422 22777777665554444455443
No 87
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=37.95 E-value=1.2e+02 Score=26.33 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+..|
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (375)
T 1r0m_A 228 LVDHAELARRIRTPLCLDESVASASDARKALALG-AGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLESG 302 (375)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-SCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhC-CCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 4455666655333 34445557888999888754 57888887765311 11247899999999997665544443
No 88
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=37.64 E-value=45 Score=26.78 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhc
Q 022889 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 ~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
..|-.++||+|++.++.-..++.|+.-+..+|.-.|+..+-
T Consensus 74 D~TD~e~Al~~a~~~~~~~I~i~Ga~GgR~DH~lani~ll~ 114 (212)
T 3l8m_A 74 DDTDLALGIDQAVKRGYRNIDVYGATGGRLDHFMGALQILE 114 (212)
T ss_dssp CBCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEcCCCCchhHHHHHHHHHH
Confidence 46788999999999988888999999888999988887763
No 89
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=37.64 E-value=53 Score=30.10 Aligned_cols=60 Identities=23% Similarity=0.250 Sum_probs=48.4
Q ss_pred HhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEeccc
Q 022889 61 RRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 128 (290)
Q Consensus 61 ~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~ 128 (290)
+|+.+.|+|-+ ..++++++.-.++.+++|+...||+-..-++.+.++.+.++.|+++-=+
T Consensus 205 ~R~~~gyld~~--------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQ 264 (557)
T 1uwk_A 205 FRLETRYVDEQ--------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQ 264 (557)
T ss_dssp HHHHTTSCCEE--------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCC
T ss_pred HHHhCCCceeE--------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCC
Confidence 46777788763 1238999999999999999999999998899999999877766665433
No 90
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=37.41 E-value=17 Score=22.40 Aligned_cols=50 Identities=6% Similarity=-0.031 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
+.++.+.++.|+|..++|-+.-.+.+.++...-|-+..+.+.+.....++
T Consensus 8 ~~l~~~r~~~g~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~i~~~l 57 (68)
T 2r1j_L 8 ERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKAL 57 (68)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 56777777778888877766544433333333333222244444444443
No 91
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=37.31 E-value=45 Score=27.05 Aligned_cols=102 Identities=13% Similarity=0.122 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHhhCCCcccEEEeecCCCC-CccHHHHHHHHHHHHHcCcccEEEccCCC--HHHHHHHHHcCCCeeEe
Q 022889 49 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFD--TERLRIILENGIPVVSN 125 (290)
Q Consensus 49 ~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~-~~~~~e~~~~l~~l~~~G~ir~iGvs~~~--~~~l~~~~~~~~~~~~~ 125 (290)
...+...+...|++.+.+.-.+ .+--.... ..+...+...+..|++.|- .|++..|. ...+..+.. .+++.+
T Consensus 108 ~~~~~~~l~~~l~~~~~~~~~l-~lEitE~~~~~~~~~~~~~l~~L~~~G~--~ialDdfG~g~s~l~~L~~--l~~d~i 182 (250)
T 4f3h_A 108 DPQMIDTIREQLAVYGVPGERL-WLQTPESKVFTHLRNAQQFLASVSAMGC--KVGLEQFGSGLDSFQLLAH--FQPAFL 182 (250)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGE-EEEEEHHHHHHSHHHHHHHHHHHHTTTC--EEEEEEETSSTHHHHHHTT--SCCSEE
T ss_pred CcHHHHHHHHHHHHcCCCcceE-EEEEechhhhcCHHHHHHHHHHHHHCCC--EEEEeCCCCCchHHHHHhh--CCCCEE
Confidence 3456778888888888653333 22221111 0114678899999999998 56666654 344554443 567887
Q ss_pred cccccccCCC---c-----chHHHHHHHHhCCceeeec
Q 022889 126 QVQHSVVDMR---P-----QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 126 q~~~n~~~~~---~-----~~~~~~~~~~~gi~via~s 155 (290)
-+.-+++..- . -..++..|+..|+.++|=.
T Consensus 183 KiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG 220 (250)
T 4f3h_A 183 KLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF 220 (250)
T ss_dssp EECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC
T ss_pred EECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec
Confidence 7775555321 1 1367889999999999844
No 92
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=36.92 E-value=1.2e+02 Score=26.42 Aligned_cols=73 Identities=16% Similarity=0.194 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCcccEEE-ccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.|-=++ =+-++.+.++.+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+..+
T Consensus 230 ~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 230 IPAMAHVREKVGIPIVADQAAFTLYDVYEICRQR-AADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeeccCcCCH
Confidence 44455555543332222 2334677777777643 46666666554311 11247888999999999988755443
No 93
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.79 E-value=1.1e+02 Score=24.75 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhhCCCcccEEEeecC---------CCCC----ccHHHHHHHHHHHHHc-CcccEEEccCCCH--HHHHHH
Q 022889 52 VRESIDVSRRRMDVPCLDMLQFHWW---------DYSN----PGYLDALNHLTDLKEE-GKIKTVALTNFDT--ERLRII 115 (290)
Q Consensus 52 i~~~~e~SL~~L~~d~iDl~~lH~~---------~~~~----~~~~e~~~~l~~l~~~-G~ir~iGvs~~~~--~~l~~~ 115 (290)
+.+.++...+.+..+..|++.-..- +.+. ...-+++.+|.++++. ++|.-+|..|... ..+..+
T Consensus 48 le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~l 127 (225)
T 2pju_A 48 FEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKT 127 (225)
T ss_dssp HHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHH
Confidence 4455555555555444676554321 1110 1146899999999885 6678888888654 334444
Q ss_pred HHcCCCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 116 LENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 116 ~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
+ +.+ +.+..|+- ...-...+..+++.|+.++.-.
T Consensus 128 l--~~~--i~~~~~~~--~ee~~~~i~~l~~~G~~vVVG~ 161 (225)
T 2pju_A 128 F--NLR--LDQRSYIT--EEDARGQINELKANGTEAVVGA 161 (225)
T ss_dssp H--TCC--EEEEEESS--HHHHHHHHHHHHHTTCCEEEES
T ss_pred h--CCc--eEEEEeCC--HHHHHHHHHHHHHCCCCEEECC
Confidence 4 333 33333332 2223578889999999988744
No 94
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=36.46 E-value=2.1e+02 Score=24.64 Aligned_cols=102 Identities=9% Similarity=0.044 Sum_probs=59.8
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+. .+-++. |+.++.+ ++..|-.. +-++.+.+++++-.| -..|=+-++.+.++.+++.+ ..++
T Consensus 193 ~~~~~~-~~~~~~-l~~~~i~-----~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~ 259 (368)
T 1sjd_A 193 AYTLGD-APQLAR-LDPFGLL-----LIEQPLEE-----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLG-AVQI 259 (368)
T ss_dssp CCCGGG-HHHHHT-TGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHH-HHHHHH-HHhcCCC-----eEeCCCCh-----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcC-CCCE
Confidence 345544 333322 5555443 45565432 235566677765444 23344456888899888754 5788
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
+|+..+-+-. ..-..+...|+++|+.++..+.+..|
T Consensus 260 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 296 (368)
T 1sjd_A 260 VNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIETG 296 (368)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCcEEeCCccccH
Confidence 8887765311 11247899999999997665555443
No 95
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=36.06 E-value=26 Score=21.86 Aligned_cols=23 Identities=26% Similarity=0.356 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHH
Q 022889 204 LLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 204 ~~~~l~~la~~~~~s~~q~al~~ 226 (290)
+-+.++.+.++.|+|..++|-+-
T Consensus 9 ~g~~l~~~r~~~glsq~~lA~~~ 31 (71)
T 2ewt_A 9 LGAKLRAIRTQQGLSLHGVEEKS 31 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 34788888888999999887654
No 96
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=36.04 E-value=23 Score=22.60 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeeccc-CCcHHHHHHhhhhhc
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR-LGLAEHIQDTNAIFM 256 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~-~~~~~~l~enl~a~~ 256 (290)
..++.+..+.|+|..++|-+--.+...++...-|-+ ..+.+.+.....+++
T Consensus 10 ~~l~~~r~~~g~sq~~lA~~~gis~~~i~~~e~g~~~~~~~~~l~~ia~~l~ 61 (78)
T 3b7h_A 10 EHLMELITQQNLTINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCGTLG 61 (78)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHCTTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHcC
Confidence 678888888889988888665544443333333433 222444544444443
No 97
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=35.96 E-value=1.8e+02 Score=23.95 Aligned_cols=35 Identities=9% Similarity=-0.075 Sum_probs=23.2
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEE
Q 022889 38 TKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 72 (290)
Q Consensus 38 ~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~ 72 (290)
+++-++.+..+.+.-.+-++..++.++.||||+=+
T Consensus 97 t~~EGG~~~~~~~~y~~ll~~~~~~~~~dyIDVEl 131 (259)
T 3l9c_A 97 TEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEY 131 (259)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEEH
T ss_pred ehhhCCCCCCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 33333333456666667777777779999999853
No 98
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=35.30 E-value=37 Score=22.27 Aligned_cols=32 Identities=25% Similarity=0.209 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCce
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~ 234 (290)
...+.++.+.++.|+|..++|-+--.+...++
T Consensus 18 ~~~~~l~~~r~~~glsq~elA~~~gis~~~is 49 (83)
T 2a6c_A 18 QLLIVLQEHLRNSGLTQFKAAELLGVTQPRVS 49 (83)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHH
Confidence 34478888888999999998876544444333
No 99
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=34.87 E-value=1.6e+02 Score=22.81 Aligned_cols=89 Identities=17% Similarity=0.271 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccC-CCHHHHHHHHHcCCCeeEec
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-FDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~~q 126 (290)
+.+...+.+ +.+..-|. |++-+|...+ ...+.++.+.+....+ ..||+++ .+.+++..+.+.+..+.
T Consensus 20 ~~~~~~~~~-~~~~~~G~---~~iev~~~~~---~~~~~i~~ir~~~~~~--~~ig~~~v~~~~~~~~a~~~Gad~i--- 87 (205)
T 1wa3_A 20 SVEEAKEKA-LAVFEGGV---HLIEITFTVP---DADTVIKELSFLKEKG--AIIGAGTVTSVEQCRKAVESGAEFI--- 87 (205)
T ss_dssp SHHHHHHHH-HHHHHTTC---CEEEEETTST---THHHHHHHTHHHHHTT--CEEEEESCCSHHHHHHHHHHTCSEE---
T ss_pred CHHHHHHHH-HHHHHCCC---CEEEEeCCCh---hHHHHHHHHHHHCCCC--cEEEecccCCHHHHHHHHHcCCCEE---
Confidence 455544444 34455564 4556665532 2344444444443323 3588854 68888888887664433
Q ss_pred ccccccCCCcchHHHHHHHHhCCceee
Q 022889 127 VQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 127 ~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
+..+ ...++++.|++.|+.+++
T Consensus 88 v~~~-----~~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 88 VSPH-----LDEEISQFCKEKGVFYMP 109 (205)
T ss_dssp ECSS-----CCHHHHHHHHHHTCEEEC
T ss_pred EcCC-----CCHHHHHHHHHcCCcEEC
Confidence 2111 135799999999999986
No 100
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=34.75 E-value=55 Score=29.97 Aligned_cols=60 Identities=28% Similarity=0.281 Sum_probs=48.5
Q ss_pred HhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEeccc
Q 022889 61 RRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 128 (290)
Q Consensus 61 ~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~ 128 (290)
+|+.+.|+|-+. .++++++.-.++.+++|+...||+-..-++.+.++.+.++.|+++-=+
T Consensus 200 ~R~~~gyld~~~--------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQ 259 (551)
T 1x87_A 200 RRIDTNYLDTMT--------DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQ 259 (551)
T ss_dssp HHHHTTSCSEEE--------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCC
T ss_pred HHHhCCCceeEc--------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCC
Confidence 466777888632 238999999999999999999999998899999999877776665433
No 101
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=34.68 E-value=2.1e+02 Score=24.18 Aligned_cols=100 Identities=9% Similarity=-0.012 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEee-cCCCCCcc----HHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCe
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG----YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH-~~~~~~~~----~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
+.+.+.+..++. -.-|-|.||+=--- .|.....+ +..+...++.+++++. -|.|-++.++.++++++.|.++
T Consensus 44 ~~~~a~~~a~~~-v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAERM-IAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHHH-HHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHH-HHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 455555555443 35688999985422 23322111 3446666677766543 4788899999999999876432
Q ss_pred eEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+| ..|... ..++++.+++.|++++.+..
T Consensus 121 -IN--dVsg~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 -IN--DIWGFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp -EE--ETTTTC---STTHHHHHSSSSCEEEEECC
T ss_pred -EE--ECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 22 222222 45889999999999999875
No 102
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=34.38 E-value=1.8e+02 Score=25.38 Aligned_cols=87 Identities=8% Similarity=0.048 Sum_probs=53.6
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHc-CcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-.... ++.+.+++++ +.--..|=+-++.+.+..+++.+ -++++|+...-+-. ..-..+...|+
T Consensus 214 ~~l~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGi~~~~~ia~~A~ 287 (379)
T 3r0u_A 214 LNVEIIEQPVKYYD-----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ-ACNMINIKLAKTGGILEAQKIKKLAD 287 (379)
T ss_dssp CCEEEEECCSCTTC-----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCccc-----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHHHHH
Confidence 45666766644221 3445555554 33345566667778887777744 46777776554311 11247889999
Q ss_pred HhCCceeeecccccc
Q 022889 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
++|+.++..+.+..+
T Consensus 288 ~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 288 SAGISCMVGCMMESP 302 (379)
T ss_dssp HTTCEEEECCCSCCH
T ss_pred HcCCEEEEeCCCccH
Confidence 999999988776554
No 103
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=33.93 E-value=63 Score=27.06 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhCCCcccEEEeecCCCC----CccHHHHHHHHHHHHH-cCcccEEEcc
Q 022889 53 RESIDVSRRRMDVPCLDMLQFHWWDYS----NPGYLDALNHLTDLKE-EGKIKTVALT 105 (290)
Q Consensus 53 ~~~~e~SL~~L~~d~iDl~~lH~~~~~----~~~~~e~~~~l~~l~~-~G~ir~iGvs 105 (290)
++++.+.|++||+..=|.+++|.--.. ...-..++++|.+++. +|.+---..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 356777889999999999999985322 1224788999988876 7876555443
No 104
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=33.79 E-value=1.7e+02 Score=26.38 Aligned_cols=71 Identities=6% Similarity=0.000 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEcc-CCCHHHHHHHHHcCCCeeEec
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~q 126 (290)
+++.+.... .+|.||+=+.+...-..... .+.... +.+...+..+||. |-+.+.+.++.+. ..++++|
T Consensus 264 ~~eda~~a~-----~~Gad~iGfIf~~~SpR~V~--~~~a~~---i~~~~~v~~VgVFvn~~~~~i~~~~~~-~~ld~vQ 332 (452)
T 1pii_A 264 RGQDAKAAY-----DAGAIYGGLIFVATSPRCVN--VEQAQE---VMAAAPLQYVGVFRNHDIADVVDKAKV-LSLAAVQ 332 (452)
T ss_dssp SHHHHHHHH-----HHTCSEEEEECCTTCTTBCC--HHHHHH---HHHHCCCEEEEEESSCCHHHHHHHHHH-HTCSEEE
T ss_pred cHHHHHHHH-----hcCCCEEEeecCCCCCCCCC--HHHHHH---HHhcCCCCEEEEEeCCCHHHHHHHHHh-cCCCEEE
Confidence 455554443 67999998875321112222 223222 2333578999988 6678888888773 4689999
Q ss_pred ccc
Q 022889 127 VQH 129 (290)
Q Consensus 127 ~~~ 129 (290)
+.=
T Consensus 333 LHG 335 (452)
T 1pii_A 333 LHG 335 (452)
T ss_dssp ECS
T ss_pred ECC
Confidence 875
No 105
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=33.55 E-value=61 Score=22.68 Aligned_cols=26 Identities=27% Similarity=0.439 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYIL 228 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l 228 (290)
+.++.|+++|++-|+|+++++=..++
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~ 33 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILK 33 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 45689999999999999998866554
No 106
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=33.32 E-value=1e+02 Score=26.98 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+.+.+|
T Consensus 234 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 234 RAGMVRLNASSPAPIMADESIECVEDAFNLAREG-AASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccH
Confidence 4445555554333 34555667777777777643 46677766554311 11246788999999999887766554
No 107
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=33.31 E-value=51 Score=26.81 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhCCCcccEE-EeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCH--HHHHHHHHcCCCeeEecc
Q 022889 51 IVRESIDVSRRRMDVPCLDML-QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT--ERLRIILENGIPVVSNQV 127 (290)
Q Consensus 51 ~i~~~~e~SL~~L~~d~iDl~-~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~~q~ 127 (290)
.+...+.+.+++.+.+.-.+. -|...... .+...+...+..|++.|- .|++..|.. ..+..+.. .+++.+-+
T Consensus 106 ~~~~~l~~~l~~~~~~~~~l~lEitE~~~~-~~~~~~~~~l~~l~~~G~--~ialDdfG~g~ssl~~L~~--l~~d~iKi 180 (259)
T 3s83_A 106 GLVADVAETLRVNRLPRGALKLEVTESDIM-RDPERAAVILKTLRDAGA--GLALDDFGTGFSSLSYLTR--LPFDTLKI 180 (259)
T ss_dssp THHHHHHHHHHHTTCCTTSEEEEEEHHHHH-HCHHHHHHHHHHHHHHTC--EEEEECC---CHHHHHHHH--SCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcceEEEEECCchhh-hCHHHHHHHHHHHHHCCC--EEEEECCCCCchhHHHHHh--CCCCEEEE
Confidence 356677777777765432221 11111100 124678888999999998 677777654 44555554 56788777
Q ss_pred cccccCCC---c-----chHHHHHHHHhCCceeeec
Q 022889 128 QHSVVDMR---P-----QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 128 ~~n~~~~~---~-----~~~~~~~~~~~gi~via~s 155 (290)
.-+++..- . -..++..|+..|+.++|=.
T Consensus 181 D~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG 216 (259)
T 3s83_A 181 DRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG 216 (259)
T ss_dssp CHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe
Confidence 76665321 1 2467889999999999844
No 108
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=33.21 E-value=65 Score=27.02 Aligned_cols=53 Identities=19% Similarity=0.162 Sum_probs=37.7
Q ss_pred HHHHHHHHHhhCCCcccEEEeecCCC----CCccHHHHHHHHHHHHH-cCcccEEEcc
Q 022889 53 RESIDVSRRRMDVPCLDMLQFHWWDY----SNPGYLDALNHLTDLKE-EGKIKTVALT 105 (290)
Q Consensus 53 ~~~~e~SL~~L~~d~iDl~~lH~~~~----~~~~~~e~~~~l~~l~~-~G~ir~iGvs 105 (290)
++++.+.|+.||+..=|.+++|.--. ....-..++++|.+++- +|.+--=..+
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtft 72 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQS 72 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 35677788999999999999998422 12225778999998875 7765444433
No 109
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=33.06 E-value=54 Score=30.01 Aligned_cols=60 Identities=22% Similarity=0.235 Sum_probs=48.7
Q ss_pred HhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEeccc
Q 022889 61 RRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 128 (290)
Q Consensus 61 ~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~ 128 (290)
+|+.+.|+|-+. .++++++.-.++.+++|+...||+-..-++.+.++.+.++.|+++-=+
T Consensus 201 ~R~~~gyld~~~--------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQ 260 (552)
T 2fkn_A 201 KRIETKYCDRKT--------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQ 260 (552)
T ss_dssp HHHHTTSCSEEE--------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECCC
T ss_pred HHHhCCcceeEc--------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCC
Confidence 467777888732 238999999999999999999999998899999999877776665433
No 110
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=33.03 E-value=99 Score=26.90 Aligned_cols=73 Identities=8% Similarity=0.038 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+.++
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 224 YTALPKIRQACRIPIMADESCCNSFDAERLIQIQ-ACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp GGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC-CCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 3445566655333 34445567888888888744 57888887765311 11247899999999999987766544
No 111
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=32.95 E-value=83 Score=27.68 Aligned_cols=88 Identities=10% Similarity=0.033 Sum_probs=58.0
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
..+++++-.|-.... ++.+.++.+.-.| -+.|=|-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|
T Consensus 214 ~~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~ia~~A 287 (388)
T 3qld_A 214 AYDLQFIEQPLPEDD-----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLG-AARVLNVKPGRLGGFGATLRALDVA 287 (388)
T ss_dssp GGCCSCEECCSCTTC-----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHH
T ss_pred hCCCcEEECCCCccc-----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEECchhhCCHHHHHHHHHHH
Confidence 345667777754322 3456666665333 46677778899998888754 47788887655311 1124789999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
+.+|+.++..+.+..|
T Consensus 288 ~~~gi~~~~~~~~es~ 303 (388)
T 3qld_A 288 GEAGMAAWVGGMYETG 303 (388)
T ss_dssp HHTTCEEEECCCCCCH
T ss_pred HHCCCeEEecCccchH
Confidence 9999999877765444
No 112
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=32.57 E-value=2.4e+02 Score=24.21 Aligned_cols=73 Identities=10% Similarity=0.089 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+..+
T Consensus 227 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 301 (366)
T 1tkk_A 227 LAGLKKVTDATDTPIMADESVFTPRQAFEVLQTR-SADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIETK 301 (366)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhC-CCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 3444555544333 23333445667777766543 46666666544211 11247888999999999888765443
No 113
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=32.30 E-value=1.5e+02 Score=26.44 Aligned_cols=101 Identities=9% Similarity=0.040 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCc-c-cEEEccCCCHHHHHHHHHcCCCee
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-I-KTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~-i-r~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
.++.+...+-++. |+.+++++ +..|-.. +-++.+.+++++-. | -..|=+-++.+.++.+++.+ ..+
T Consensus 239 ~~~~~eai~~~~~-L~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d 306 (428)
T 3bjs_A 239 AYTMADARRVLPV-LAEIQAGW-----LEEPFAC-----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAG-AVQ 306 (428)
T ss_dssp CCCHHHHHHHHHH-HHHTTCSC-----EECCSCT-----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTC-CEE
T ss_pred CCCHHHHHHHHHH-HHhcCCCE-----EECCCCc-----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhC-CCC
Confidence 3455554444433 56665543 3444321 22455666665433 3 23344456788888888744 588
Q ss_pred EecccccccCC-CcchHHHHHHHHhCCceeeeccccc
Q 022889 124 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 124 ~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++|+..+-+-. ..-..+...|+++|+.++.. .+..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~-~~es 342 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH-SSAT 342 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB-CCSS
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec-CCCc
Confidence 88887765311 11247899999999998887 4433
No 114
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=32.08 E-value=1.3e+02 Score=24.34 Aligned_cols=58 Identities=9% Similarity=0.201 Sum_probs=39.7
Q ss_pred HHHHHHHHHc-CcccEEEccC-CCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCC------ceee
Q 022889 87 LNHLTDLKEE-GKIKTVALTN-FDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGV------KLIT 153 (290)
Q Consensus 87 ~~~l~~l~~~-G~ir~iGvs~-~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi------~via 153 (290)
++.++.++++ +. -.||..+ .+.++++.+++.|-.|.+. +....+++++|++.|+ .++.
T Consensus 52 ~~~I~~l~~~~p~-~~IGAGTVlt~~~a~~ai~AGA~fivs--------P~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 52 LAAISAIKKAVPE-AIVGAGTVCTADDFQKAIDAGAQFIVS--------PGLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp HHHHHHHHHHCTT-SEEEEECCCSHHHHHHHHHHTCSEEEE--------SSCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred HHHHHHHHHHCCC-CeEeeccccCHHHHHHHHHcCCCEEEe--------CCCcHHHHHHHHHcCCCccCCCeEeC
Confidence 3444444443 22 4678776 4789999999887666653 2235689999999999 7776
No 115
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=31.16 E-value=1.9e+02 Score=25.27 Aligned_cols=100 Identities=8% Similarity=-0.056 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.+++++-.|- ..|=+-++.+.++.+++.+ .+++
T Consensus 217 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~ 284 (393)
T 2og9_A 217 QWDRPTAQRMCRI-FEPFNLVWI-----EEPLDA-----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHR-AADY 284 (393)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhhCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCC-CCCE
Confidence 3455554444433 555555433 344321 1244555555543332 2333445777777777644 4677
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeeccc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
+|+..+-+-. ..-..+...|+++|+.++..+..
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 318 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPHFAM 318 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEeccCcc
Confidence 7776554311 11247899999999999876543
No 116
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=31.07 E-value=1.7e+02 Score=25.61 Aligned_cols=85 Identities=11% Similarity=0.008 Sum_probs=53.9
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
.+++ ++..|-. + ++.+.+++++-.| -..|=|-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|
T Consensus 220 ~~~i-~iEeP~~---~----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~i~~~A 290 (386)
T 3fv9_G 220 GLDI-VLEAPCA---S----WAETKSLRARCALPLLLDELIQTETDLIAAIRDD-LCDGVGLKVSKQGGITPMLRQRAIA 290 (386)
T ss_dssp SCCC-EEECCCS---S----HHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHHHHHHHHH
T ss_pred cCCc-EEecCCC---C----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEECccccCCHHHHHHHHHHH
Confidence 3455 6666643 1 3445666665433 34555667888888887744 57777777654311 1124688999
Q ss_pred HHhCCceeeecccccc
Q 022889 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
+.+|+.++..+.+.++
T Consensus 291 ~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 291 AAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHTTCEEEEECSSCCH
T ss_pred HHcCCEEEeCCCCCCH
Confidence 9999999977666554
No 117
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=30.86 E-value=2e+02 Score=25.90 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=52.8
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc--CCCeeEecccccccCCCcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQVQHSVVDMRPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~q~~~n~~~~~~~~~~~~~~ 144 (290)
.+|++-|+.-..+. +.+...++.+.+. -=.-+-+.+++++.++++++. +..+.++-.. ...-+.+.+.+
T Consensus 127 ~~D~ial~~~s~dp---e~~~~vVk~V~e~-~dvPL~IDS~dpevleaALea~a~~~plI~sat-----~dn~e~m~~lA 197 (446)
T 4djd_C 127 TIQAIAIRHDADDP---AAFKAAVASVAAA-TQLNLVLMADDPDVLKEALAGVADRKPLLYAAT-----GANYEAMTALA 197 (446)
T ss_dssp CCCEEEEECCSSST---HHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHGGGGGGCCEEEEEC-----TTTHHHHHHHH
T ss_pred cCcEEEEEeCCCCH---HHHHHHHHHHHHh-CCCCEEEecCCHHHHHHHHHhhcCcCCeeEecc-----hhhHHHHHHHH
Confidence 68888888875432 3344444444432 223677778999999999973 2334443322 22234789999
Q ss_pred HHhCCceeeecc
Q 022889 145 QLTGVKLITYGT 156 (290)
Q Consensus 145 ~~~gi~via~sp 156 (290)
++.|..++++++
T Consensus 198 a~y~~pVi~~~~ 209 (446)
T 4djd_C 198 KENNCPLAVYGN 209 (446)
T ss_dssp HHTTCCEEEECS
T ss_pred HHcCCcEEEEec
Confidence 999999999976
No 118
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=30.56 E-value=1.3e+02 Score=25.90 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+..|
T Consensus 221 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 295 (369)
T 2zc8_A 221 LLDHAKLQRELSTPICLDESLTGAEKARKAIELG-AGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGMLEAG 295 (369)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhC-CCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 3445566655333 34445557888888888754 47777876654311 11247899999999997665555443
No 119
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=30.48 E-value=78 Score=20.25 Aligned_cols=53 Identities=21% Similarity=0.130 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcC
Q 022889 205 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 257 (290)
Q Consensus 205 ~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~ 257 (290)
.+.++.+.++.|+|..++|-+.-.++..++-..-|-+..+.+.+....++++.
T Consensus 14 ~~~l~~~r~~~gltq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v 66 (80)
T 3kz3_A 14 KAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKV 66 (80)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCC
Confidence 36677777778888888776665554444444444433334555555555543
No 120
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=30.28 E-value=36 Score=21.54 Aligned_cols=53 Identities=25% Similarity=0.132 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhc
Q 022889 204 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 204 ~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
+...++.+..+.|+|..++|-+--.+...++...-|-+..+.+.+.....+++
T Consensus 11 ~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~la~~l~ 63 (77)
T 2b5a_A 11 FGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALD 63 (77)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 34677888888888888888665444433333333433333555555555443
No 121
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=30.17 E-value=24 Score=22.70 Aligned_cols=51 Identities=8% Similarity=-0.111 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhc
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
..++.+.++.|+|..++|-+--.+...++...-|-+..+.+.+.....+++
T Consensus 5 ~~lk~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~ 55 (77)
T 2k9q_A 5 NELKVERIRLSLTAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLRSKG 55 (77)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTCCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhC
Confidence 566677777777777777665554444443444444333566666656554
No 122
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=30.02 E-value=97 Score=26.18 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhCCCcccEEEeecCCCCCc----cHHHHHHHHHHHH-HcCcccEEEcc
Q 022889 53 RESIDVSRRRMDVPCLDMLQFHWWDYSNP----GYLDALNHLTDLK-EEGKIKTVALT 105 (290)
Q Consensus 53 ~~~~e~SL~~L~~d~iDl~~lH~~~~~~~----~~~e~~~~l~~l~-~~G~ir~iGvs 105 (290)
++++.+.|+.||+..=|.+++|.--.... .-+.++++|.+++ .+|.+---..|
T Consensus 24 ~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 24 RDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 46778889999999999999998643322 2477899998888 47887655544
No 123
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=29.95 E-value=2.3e+02 Score=24.82 Aligned_cols=70 Identities=10% Similarity=0.122 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeeccc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.+++++-.|- ..|=+-++.+.++.+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+..
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 250 LDALAEVRRSTSTPICAGENVYTRFDFRELFAKR-AVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTT-CCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 34444444443332 2222334566666666533 35555655443210 11236788999999999887764
No 124
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=29.76 E-value=1.7e+02 Score=25.56 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeeccc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.++++.-.|- ..|=+-++.+.++.+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+..
T Consensus 255 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 255 PAQMKQVADKVNIPLAAGERIYWRWGYRPFLENG-SLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 34444454443332 2222234556666666533 46666666554311 11247888999999999887764
No 125
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=29.59 E-value=2.2e+02 Score=24.88 Aligned_cols=85 Identities=6% Similarity=0.037 Sum_probs=54.8
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++ ++..|- . -++.+.++++.-.| -+.|=+-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|+
T Consensus 236 ~~i-~iEeP~---~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~ik~~~~GGit~~~~ia~~A~ 306 (391)
T 4e8g_A 236 IPF-VLEQPC---N----TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQG-LCDGFGMKLTRIGGLQQMAAFRDICE 306 (391)
T ss_dssp SCE-EEESCS---S----SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHHHHHHHHHH
T ss_pred cCe-EEecCC---c----cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHHH
Confidence 466 666662 1 13456666665433 45566667888888888744 47777777654311 11246889999
Q ss_pred HhCCceeeeccccccc
Q 022889 146 LTGVKLITYGTVMGGL 161 (290)
Q Consensus 146 ~~gi~via~spl~~G~ 161 (290)
++|+.++..+.+..++
T Consensus 307 ~~gi~~~~~~~~es~i 322 (391)
T 4e8g_A 307 ARALPHSCDDAWGGDI 322 (391)
T ss_dssp HTTCCEEEECSSCSHH
T ss_pred HcCCeEEeCCcCCCHH
Confidence 9999999887775543
No 126
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=29.41 E-value=2.3e+02 Score=24.89 Aligned_cols=102 Identities=14% Similarity=-0.010 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+. .+ +-+.|+.++. .++..|-... -++.+.++++.-.| -..|=+-++.+.+..+++.+ .+++
T Consensus 215 ~w~~~~-~~-~~~~l~~~~i-----~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-~~d~ 281 (400)
T 3mwc_A 215 SFELDQ-WE-TFKAMDAAKC-----LFHEQPLHYE-----ALLDLKELGERIETPICLDESLISSRVAEFVAKLG-ISNI 281 (400)
T ss_dssp CCCGGG-HH-HHHHHGGGCC-----SCEESCSCTT-----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHH-HH-HHHHHHhcCC-----CEEeCCCChh-----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcC-CCCE
Confidence 445554 22 2245555554 3445664321 24556667665333 45566677888888888754 5788
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
+|+..+-+-. ..-..+...|+.+|+.++..+.+..|
T Consensus 282 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 282 WNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred EEEcchhhCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 8887655311 11247899999999999887755443
No 127
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=29.35 E-value=2.3e+02 Score=24.64 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCcccEE-EccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeeccc
Q 022889 87 LNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.+++++-.|-=. |=+-++.+.++.+++.+ ..+++|+..+-+-. ..-..+...|+++|+.++..+..
T Consensus 239 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 239 NGALKVISEQIPLPIAVGERVYTRFGFRKIFELQ-ACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTT-CCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 4445555554334222 22334567777777643 46777776654311 11247889999999999987765
No 128
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=29.30 E-value=2.4e+02 Score=24.76 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=55.6
Q ss_pred EeecCCCCCccHHHHHHHHHHHHHc-----Ccc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 72 QFHWWDYSNPGYLDALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 72 ~lH~~~~~~~~~~e~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
+|..|-.... ..+-++.+.+|.++ -.| -..|=|-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|
T Consensus 271 ~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~~GGit~a~~i~~~A 348 (413)
T 1kcz_A 271 RIEGPMDVED-RQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNK-AGHMVQIKTPDLGGVNNIADAIMYC 348 (413)
T ss_dssp EEECSBCCSS-HHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTT-CSSEEEECTGGGSSTHHHHHHHHHH
T ss_pred EEecCCCCCC-CcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhC-CCCEEEeCccccCCHHHHHHHHHHH
Confidence 6666653221 24456677777765 222 34555667888888888744 57888887765421 1124789999
Q ss_pred HHhCCceeeec-cccc
Q 022889 145 QLTGVKLITYG-TVMG 159 (290)
Q Consensus 145 ~~~gi~via~s-pl~~ 159 (290)
+++|+.++..+ .+..
T Consensus 349 ~~~gi~~~~~~~~~es 364 (413)
T 1kcz_A 349 KANGMGAYCGGTCNET 364 (413)
T ss_dssp HHTTCEEEECCCTTSC
T ss_pred HHcCCEEEecCCCCCC
Confidence 99999999865 4433
No 129
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=29.07 E-value=2.7e+02 Score=24.22 Aligned_cols=73 Identities=8% Similarity=0.108 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+.+..+
T Consensus 234 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 234 LETLREITRRTNVSVMADESVWTPAEALAVVKAQ-AADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHT-CCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcC-CCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 3445555554223 34445557788888887744 57778877665311 11246888999999999887766554
No 130
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=29.04 E-value=1.6e+02 Score=25.56 Aligned_cols=68 Identities=21% Similarity=0.139 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeec
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~s 155 (290)
++.+.+|++.-.+ -+.|=|-++.+.+..+++.+ -++++|+...-+-. ..-..+...|+.+|+.++...
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h~ 297 (378)
T 4hpn_A 228 LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAG-AVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHV 297 (378)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTT-CCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCBC
T ss_pred hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcC-CCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeCC
Confidence 4556666665444 45567777888888888744 57788877654311 112478889999999976543
No 131
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=29.00 E-value=82 Score=27.58 Aligned_cols=87 Identities=15% Similarity=0.089 Sum_probs=55.1
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-... -++.+.++.++-.| -..|=|-++.+.+..+++.+ -++++|+..+-+-. ..-..+...|+
T Consensus 227 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~i~ik~~~~GGit~~~~i~~~A~ 300 (386)
T 1wue_A 227 YQLAMIEQPFAAD-----DFLDHAQLQRELKTRICLDENIRSLKDCQVALALG-SCRSINLKIPRVGGIHEALKIAAFCQ 300 (386)
T ss_dssp SCCSCEECCSCTT-----CSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCCeEEeCCCCcc-----cHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcC-CCCEEEEchhhhCCHHHHHHHHHHHH
Confidence 4555666664332 23455666655333 35556667888888888744 47777777654311 11247889999
Q ss_pred HhCCceeeecccccc
Q 022889 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
++|+.++..+.+..|
T Consensus 301 ~~gi~~~~~~~~es~ 315 (386)
T 1wue_A 301 ENDLLVWLGGMFESG 315 (386)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HCCCeEEECCCcccH
Confidence 999999887766554
No 132
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=28.82 E-value=2.9e+02 Score=24.07 Aligned_cols=69 Identities=13% Similarity=0.003 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++.+.+++++-.|- ..|=+-++.+.++.+++.+ ..+++|+..+-+-. ..-..+...|+++|+.++..+.
T Consensus 260 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 260 IEGHAQLAAALDTPIATGEMLTSFREHEQLILGN-ASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEeecCc
Confidence 44555555543332 2333445677777777643 46777776554211 1124789999999999986654
No 133
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.57 E-value=1.2e+02 Score=24.05 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEcc-CCCHHHHHHHHHcCCCeeEec
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~q 126 (290)
+++.++.. ..+|.||+=+.+. -+.+-..+ .+....|.+... ..+..+||. |.+.+.+.++.+. ..++++|
T Consensus 10 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~~-~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 80 (203)
T 1v5x_A 10 RLEDALLA-----EALGAFALGFVLA-PGSRRRIA-PEAARAIGEALG-PFVVRVGVFRDQPPEEVLRLMEE-ARLQVAQ 80 (203)
T ss_dssp CHHHHHHH-----HHHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHSC-SSSEEEEEESSCCHHHHHHHHHH-TTCSEEE
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhCC-CCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 45555443 4789999988742 22222221 334444433322 458899987 5678888888763 4799999
Q ss_pred ccc
Q 022889 127 VQH 129 (290)
Q Consensus 127 ~~~ 129 (290)
+.-
T Consensus 81 LHG 83 (203)
T 1v5x_A 81 LHG 83 (203)
T ss_dssp ECS
T ss_pred ECC
Confidence 974
No 134
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=27.85 E-value=27 Score=22.73 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeec-ccCCcHHHHHHhhhhhc
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG-VRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g-~~~~~~~~l~enl~a~~ 256 (290)
..++++-++.|+|..++|-+--.+...++...-| .+..+.+.+....++++
T Consensus 13 ~~ik~~R~~~gltq~elA~~~gis~~~is~~E~G~~~~p~~~~l~~ia~~l~ 64 (78)
T 3qq6_A 13 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLD 64 (78)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSCCCCBHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHC
Confidence 6777777888888888877655444444333344 23333555555555544
No 135
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=27.80 E-value=3.3e+02 Score=24.33 Aligned_cols=97 Identities=9% Similarity=0.021 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccC--CCHHHHHHHHHcCCCeeE
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 124 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~ 124 (290)
++++.+.+.+.+.++.+ ++++|-.|-... -|+.+.+|.++.+|-=.|=-. ++.+.+..+++.+ -.++
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~d-----D~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~-a~d~ 338 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQD-----DWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEK-ACNC 338 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT-----CHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCcc-----cHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhC-CCCE
Confidence 46676666666666654 578898886432 267778888887765444322 4889999998854 4777
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeee
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
+|+..|-+-. ..-.++...|+.+|+.++..
T Consensus 339 i~iKv~qiGGitea~~ia~lA~~~g~~~~~s 369 (439)
T 2akz_A 339 LLLKVNQIGSVTEAIQACKLAQENGWGVMVS 369 (439)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHCCCeEEee
Confidence 7777664311 11247889999999987653
No 136
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=27.64 E-value=3.1e+02 Score=23.96 Aligned_cols=69 Identities=9% Similarity=0.127 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 87 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++.+.+++++-.|- ..|=+-++.+.++.+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 258 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 258 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQ-SIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 34444454443332 2223334566666666533 46666666554211 1124788899999999988766
No 137
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=27.33 E-value=42 Score=21.69 Aligned_cols=54 Identities=20% Similarity=0.018 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhc
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
.+.+.++.+.++.|+|..++|-+--.+...++-..-|-+..+.+.+.....+++
T Consensus 14 ~~~~~l~~~R~~~gltq~elA~~~gis~~~is~~e~g~~~~~~~~l~~l~~~l~ 67 (83)
T 3f6w_A 14 ALLDLLLEARSAAGITQKELAARLGRPQSFVSKTENAERRLDVIEFMDFCRGIG 67 (83)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHcC
Confidence 344778888888899998888776555444443434443333555555555554
No 138
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=27.24 E-value=48 Score=20.76 Aligned_cols=50 Identities=6% Similarity=-0.031 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
+.++.+.++.|+|..++|-+.-.+...++...-|-+..+.+.+.....++
T Consensus 8 ~~l~~~r~~~gls~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l 57 (76)
T 1adr_A 8 ERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKAL 57 (76)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 56677777778887777766544433333333333322245555544444
No 139
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=27.08 E-value=2.6e+02 Score=24.68 Aligned_cols=97 Identities=11% Similarity=0.074 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCc--c-cEEEccCCCHHHHHHHHHcCCCee
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK--I-KTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~--i-r~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
++.+...+-++. |+. .++.+|..|-.... ++.+.+|.+.-. | -..|=+-++...+..+++.+ ++
T Consensus 233 ~~~~~Ai~~~~~-l~~-----~~i~~iEqPl~~~d-----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~--~d 299 (415)
T 2p3z_A 233 QDVNYATKLAHA-CAP-----FNLKWIEECLPPQQ-----YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG--ID 299 (415)
T ss_dssp CCHHHHHHHHHH-HGG-----GTCCEEECCSCTTC-----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT--CS
T ss_pred CCHHHHHHHHHH-Hhh-----cCCceEeCCCCcch-----HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC--CC
Confidence 455544444433 443 45667777754322 444555555422 2 24455667888888888754 88
Q ss_pred EecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 124 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 124 ~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++|+..+-+-. ..-..+...|+++|+.++..+.
T Consensus 300 ~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~ 333 (415)
T 2p3z_A 300 IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS 333 (415)
T ss_dssp EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh
Confidence 88887665311 1124789999999999987654
No 140
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=26.62 E-value=2e+02 Score=24.48 Aligned_cols=104 Identities=8% Similarity=-0.012 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+...+-++. |+.++.+ +.++..|-+. +-++.+.+++++-.| -..|=+-++.+.+..+++.+ .+++
T Consensus 192 ~~~~~~a~~~~~~-l~~~~i~---~~~iE~P~~~-----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~-~~d~ 261 (345)
T 2zad_A 192 GYTQKEAVEFARA-VYQKGID---IAVYEQPVRR-----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE-AVDY 261 (345)
T ss_dssp CSCHHHHHHHHHH-HHHTTCC---CSEEECCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCC---eeeeeCCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhC-CCCE
Confidence 3455554443333 5555443 1134555322 124445555554333 23333445677777777644 4666
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
+|+..+- -. ..-..+...|+.+|+.++..+.+..+
T Consensus 262 v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 262 VNIKLMK-SGISDALAIVEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp EEECHHH-HHHHHHHHHHHHHHTTTCEEEECCSSCCH
T ss_pred EEEeccc-ccHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 6665432 10 11246788899999999888765443
No 141
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=26.50 E-value=45 Score=21.51 Aligned_cols=54 Identities=15% Similarity=0.109 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcC
Q 022889 204 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 257 (290)
Q Consensus 204 ~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~ 257 (290)
+-..++.+..+.|+|..++|-+--.+...++-..-|-+..+.+.+.....+++.
T Consensus 12 ~g~~lk~~R~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~v 65 (82)
T 3s8q_A 12 VSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEV 65 (82)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCc
Confidence 347788888888899888887765554444444445444446666666666543
No 142
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=26.34 E-value=66 Score=24.27 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHcCc--ccEEEcc
Q 022889 85 DALNHLTDLKEEGK--IKTVALT 105 (290)
Q Consensus 85 e~~~~l~~l~~~G~--ir~iGvs 105 (290)
..+..|.+..++|+ |..|=|.
T Consensus 60 p~l~~ll~~~~~g~~~~d~lvv~ 82 (167)
T 3guv_A 60 IQFNRMMEDIKSGKDGVSFVLVF 82 (167)
T ss_dssp HHHHHHHHHHHTCTTCCSEEEES
T ss_pred HHHHHHHHHHHcCCCCccEEEEE
Confidence 34444444455555 5555444
No 143
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=26.13 E-value=3.2e+02 Score=23.69 Aligned_cols=98 Identities=7% Similarity=-0.049 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCccc-EEEccCCCHHHHHHHHHcCCCeeEe
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
++.+...+-++. |+.+++++ +..|-.. +-++.+.++++.-.|- ..|=+-++.+.++.+++.+ .++++
T Consensus 205 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 272 (391)
T 2qgy_A 205 EDLDQTKSFLKE-VSSFNPYW-----IEEPVDG-----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRN-AADIF 272 (391)
T ss_dssp SCHHHHHHHHHH-HGGGCCSE-----EECSSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCCe-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC-CCCEE
Confidence 455544444333 55555443 3444321 2245556666554442 3333445778888887744 57778
Q ss_pred cccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 273 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 273 NPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 877665311 1124788899999999988875
No 144
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=25.94 E-value=2.2e+02 Score=25.12 Aligned_cols=82 Identities=12% Similarity=0.027 Sum_probs=52.9
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcc---cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI---KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 143 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~ 143 (290)
++++++-.|-... -++.+.+++++-.+ -+.|=+-++.+.+..+++.+ -++++|+..+-+-. ..-..+...
T Consensus 236 ~~l~~iEeP~~~~-----d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~-a~dii~~d~~~~GGitea~kia~l 309 (404)
T 3ekg_A 236 YGLKWIEEALPPD-----DYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMG-CCDIIQPDVGWCGGVTELLKISAL 309 (404)
T ss_dssp GTCCEEECCSCTT-----CHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHH
T ss_pred cCCcEEecCCCcc-----cHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcC-CCCeEecChhhcCCccHHHHHHHH
Confidence 4556666664322 24456666665443 35676777888888888744 57888887765311 122468899
Q ss_pred HHHhCCceeeec
Q 022889 144 CQLTGVKLITYG 155 (290)
Q Consensus 144 ~~~~gi~via~s 155 (290)
|+..|+.++..+
T Consensus 310 A~a~gv~v~~h~ 321 (404)
T 3ekg_A 310 ADAHNALVVPHG 321 (404)
T ss_dssp HHHTTCEECCCC
T ss_pred HHHcCCEEEecC
Confidence 999999998654
No 145
>2omk_A Hypothetical protein; succinimide, thiamin pyrophosphokinase, structural genomics, protein structure initiative; 1.80A {Bacteroides thetaiotaomicron}
Probab=25.93 E-value=1e+02 Score=25.09 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 216 ~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
+-|-.++|+.++..++.-..+++|+.-+..+|.-.|+..+
T Consensus 104 D~TD~e~Al~~a~~~g~~~I~i~Ga~GgRlDH~laNi~lL 143 (231)
T 2omk_A 104 ETNDQTKAVHYLQSKGIRKIAIVGATGKREDHTLGNISLL 143 (231)
T ss_dssp CCCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEECccCCchhHHHHHHHHH
Confidence 4678899999999988777888999887788888887765
No 146
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=25.89 E-value=1.6e+02 Score=23.79 Aligned_cols=60 Identities=8% Similarity=0.135 Sum_probs=36.3
Q ss_pred HHHcCcccEEEccCCCHHHHHHHHHcC--CCeeEe-------------------------cccccccCCCcchHHHHHHH
Q 022889 93 LKEEGKIKTVALTNFDTERLRIILENG--IPVVSN-------------------------QVQHSVVDMRPQQKMAELCQ 145 (290)
Q Consensus 93 l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~~-------------------------q~~~n~~~~~~~~~~~~~~~ 145 (290)
+++.|....+=+++|+...+..+.+.. ++.... ...|+. ...+++..|+
T Consensus 126 l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~ 201 (250)
T 3ks6_A 126 LERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDT----ADAGLMAQVQ 201 (250)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGG----CCHHHHHHHH
T ss_pred HHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhh----CCHHHHHHHH
Confidence 344466666778888888777776522 222111 111111 2357888999
Q ss_pred HhCCceeeecc
Q 022889 146 LTGVKLITYGT 156 (290)
Q Consensus 146 ~~gi~via~sp 156 (290)
+.|+.+.+|.+
T Consensus 202 ~~G~~V~~WTv 212 (250)
T 3ks6_A 202 AAGLDFGCWAA 212 (250)
T ss_dssp HTTCEEEEECC
T ss_pred HCCCEEEEEeC
Confidence 99999999964
No 147
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=25.87 E-value=34 Score=26.20 Aligned_cols=63 Identities=21% Similarity=0.196 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHH
Q 022889 205 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQE 269 (290)
Q Consensus 205 ~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~ 269 (290)
.+.+.+.-.+.|+|..|+|=+=-++.-.+++++-|-.+-+.++++...+++ .|++++...|..
T Consensus 15 ~~~I~~AK~~KGLTwe~IAe~iG~S~v~vtaa~lGQ~~ls~e~A~kLa~~L--gL~~e~~~~l~~ 77 (156)
T 1dw9_A 15 ADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKL--DLDEDSILLLQM 77 (156)
T ss_dssp HHHHHHHHHHTTCCHHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHHHHHT--TCCHHHHHHTTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHh--CcCHHHHHHHhc
Confidence 356666666677888887765555555555666777776677777766654 788888766543
No 148
>3cq9_A Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=25.81 E-value=75 Score=25.78 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHhhCCCc-eeeeecccCCcHHHHHHhhhhhc
Q 022889 216 GVSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 ~~s~~q~al~~~l~~~~v-~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
..|-.++||.++..++.. ..+++|+.-+..+|.-.|+..+-
T Consensus 77 D~TD~e~Al~~a~~~~~~~~I~i~Ga~GgR~DH~laNi~lL~ 118 (227)
T 3cq9_A 77 DHTDTQLAIKSIFEQLQPDEVHLYGATGGRLDHLLANMWLVL 118 (227)
T ss_dssp SSCHHHHHHHHHHHHTCCSEEEEESCSSSCHHHHHHHHSGGG
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEcCCCCchhHHHHHHHHHH
Confidence 357889999999998765 67788999888899888887653
No 149
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=25.79 E-value=66 Score=27.67 Aligned_cols=86 Identities=9% Similarity=-0.110 Sum_probs=55.2
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQL 146 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~ 146 (290)
.++.++..|-+... +..+.+ .+.+.--+.|=|-++.+.+..+++.+ -++++|+...-+-. ..-..+...|+.
T Consensus 191 ~~i~~iEqP~~~~d-----~~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~-a~d~i~~k~~~~GGit~~~~ia~~A~~ 263 (342)
T 2okt_A 191 EQVLYIEEPFKDIS-----MLDEVA-DGTIPPIALDEKATSLLDIINLIELY-NVKVVVLKPFRLGGIDKVQTAIDTLKS 263 (342)
T ss_dssp GCEEEEECCCSSGG-----GGGGSC-TTSSCCEEESTTCCCHHHHHHHHHHS-CCCEEEECHHHHTSGGGHHHHHHHHHH
T ss_pred CCCcEEECCCCCcc-----HHHHHH-hcCCCCEEecCCCCCHHHHHHHHHhC-CCCEEEEChhhcCCHHHHHHHHHHHHH
Confidence 57778888764321 112222 22233346666778899998888754 47888887654311 122478999999
Q ss_pred hCCceeeecccccc
Q 022889 147 TGVKLITYGTVMGG 160 (290)
Q Consensus 147 ~gi~via~spl~~G 160 (290)
+|+.++..+.+..|
T Consensus 264 ~gi~~~~~~~~es~ 277 (342)
T 2okt_A 264 HGAKVVIGGMYEYG 277 (342)
T ss_dssp TTCEEEEBCSSCCH
T ss_pred CCCEEEEcCCcccH
Confidence 99999998876554
No 150
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=25.71 E-value=26 Score=21.34 Aligned_cols=19 Identities=32% Similarity=0.270 Sum_probs=10.8
Q ss_pred HHHHHHHhCCCHHHHHHHH
Q 022889 208 LKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 208 l~~la~~~~~s~~q~al~~ 226 (290)
++.+..+.|+|..++|-+-
T Consensus 6 l~~~r~~~g~s~~~lA~~~ 24 (66)
T 2xi8_A 6 LKLIREKKKISQSELAALL 24 (66)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 4455555666666665444
No 151
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=25.52 E-value=2e+02 Score=22.53 Aligned_cols=58 Identities=10% Similarity=0.137 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcCCCCHHHHHHHHHHHhhCCC
Q 022889 207 TLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 207 ~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~ 276 (290)
.+.+....++++..++|. +.. ..+.+ ++.++..+..+...+++++++.|-....+.+.
T Consensus 128 elre~L~~~kL~efE~aq--------LaN--L~PeT--adEaraLIpSle~rlsdEeLeeILd~L~k~r~ 185 (187)
T 1y14_A 128 AVIQLLKSTGLHPFEVAQ--------LGS--LACDT--ADEAKTLIPSLNNKISDDELERILKELSNLET 185 (187)
T ss_dssp HHHHHHHTTTCCHHHHHH--------HHH--SCCSS--HHHHHHHSGGGTTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCHHHHHH--------cCc--CCCCC--HHHHHHHHHhhccCCCHHHHHHHHHHHHHhhc
Confidence 333444457788777553 111 23555 99999999998889999999999888877654
No 152
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=25.34 E-value=1.8e+02 Score=25.48 Aligned_cols=68 Identities=15% Similarity=0.186 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ ++++|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 231 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 231 VGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG--VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT--CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC--CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 4455566655333 23344456788888887755 7888887765311 1124788999999999998876
No 153
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=25.32 E-value=41 Score=22.54 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcC
Q 022889 205 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 257 (290)
Q Consensus 205 ~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~ 257 (290)
.+.|+.+.++.|+|..++|-+.-.+...++...-|-+..+.+.+.....+++.
T Consensus 11 ~~~lk~~r~~~glsq~~lA~~~gis~~~is~~e~G~~~p~~~~l~~ia~~l~v 63 (94)
T 2kpj_A 11 SENLNSYIAKSEKTQLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQALADYFNI 63 (94)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHTCCHHHHHHHHTTSCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHhCCCCCCHHHHHHHHHHHCc
Confidence 36777777777888888776654444333333334333225555555555543
No 154
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=25.13 E-value=2.4e+02 Score=24.72 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
+..+.++++.-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 246 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 246 LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKG-KVHLLQSDYNRCGGLTELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC-CCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 3445556554333 33444456677777777644 46777777654311 1124688999999999987764
No 155
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=25.05 E-value=3e+02 Score=22.96 Aligned_cols=101 Identities=8% Similarity=0.025 Sum_probs=64.7
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEee-cCCCCC-c---cHHHHHHHHHHHHHc-CcccEEEccCCCHHHHHHHHHcCC
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSN-P---GYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH-~~~~~~-~---~~~e~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~ 120 (290)
.+.+.+.+..++.+ .-|-|.||+---- +|.... . ..+.+...++.++++ +. -|.+-++.++.++++++.|.
T Consensus 35 ~~~~~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa 111 (282)
T 1aj0_A 35 NSLIDAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGA 111 (282)
T ss_dssp THHHHHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCC
Confidence 35566666554443 5689999996532 243221 1 123355666666665 43 57888999999999999763
Q ss_pred CeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 121 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+ .+|-+ |.. ...++++.+++.|++++.+..
T Consensus 112 ~-iINdv--sg~---~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 112 H-IINDI--RSL---SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp C-EEEET--TTT---CSTTHHHHHHHHTCCEEEECC
T ss_pred C-EEEEC--CCC---CCHHHHHHHHHhCCeEEEEcc
Confidence 3 22222 221 245889999999999999864
No 156
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=24.96 E-value=1.2e+02 Score=24.17 Aligned_cols=80 Identities=10% Similarity=0.008 Sum_probs=48.2
Q ss_pred eeeeeccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEcc-CCCHH
Q 022889 32 DKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTE 110 (290)
Q Consensus 32 ~~~~~~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs-~~~~~ 110 (290)
+|+++.+ +++.++.. ..+|.||+=+.+. -+.+-..+ .+....|.+... ..+..+||. |.+.+
T Consensus 4 vKICGit---------~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~~-~~~~~VgVfvn~~~~ 66 (205)
T 1nsj_A 4 VKICGIT---------NLEDALFS-----VESGADAVGFVFY-PKSKRYIS-PEDARRISVELP-PFVFRVGVFVNEEPE 66 (205)
T ss_dssp EEECCCC---------SHHHHHHH-----HHHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHSC-SSSEEEEEESSCCHH
T ss_pred EEECCCC---------cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhCC-CCCCEEEEEeCCCHH
Confidence 4666664 45555443 3789999988742 22222221 234444433222 468899986 56788
Q ss_pred HHHHHHHcCCCeeEecccc
Q 022889 111 RLRIILENGIPVVSNQVQH 129 (290)
Q Consensus 111 ~l~~~~~~~~~~~~~q~~~ 129 (290)
.+.++.+. ..++++|+.-
T Consensus 67 ~i~~~~~~-~~ld~vQLHG 84 (205)
T 1nsj_A 67 KILDVASY-VQLNAVQLHG 84 (205)
T ss_dssp HHHHHHHH-HTCSEEEECS
T ss_pred HHHHHHHh-hCCCEEEECC
Confidence 88888763 4689999863
No 157
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=24.78 E-value=3.2e+02 Score=23.14 Aligned_cols=104 Identities=7% Similarity=-0.037 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcC-cccEEEccCCCHHHHHHHHHcCCCeeE
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+...+-++. |+.++ -.++.++..|-.... ++.+.++.+.- .--..|=|-++.+.+..+++.+ -.++
T Consensus 171 ~~~~~~A~~~~~~-l~~~~--~~~i~~iEqP~~~~d-----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~-a~~~ 241 (332)
T 2ozt_A 171 SWDRATANRWFAW-LDRHG--NGKIEYVEQPLPPDQ-----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRG-WPGF 241 (332)
T ss_dssp CCCHHHHHHHHHH-HHHHC--CTTEEEEECCSCTTC-----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhhc--cCCcceeECCCCCCC-----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC-CCCE
Confidence 4455554444322 44442 126778888864322 34455555543 3345666677888888888754 3566
Q ss_pred ecccccccCCCcchHHHHHHHHh--CCceeeecccccc
Q 022889 125 NQVQHSVVDMRPQQKMAELCQLT--GVKLITYGTVMGG 160 (290)
Q Consensus 125 ~q~~~n~~~~~~~~~~~~~~~~~--gi~via~spl~~G 160 (290)
+|+..+.+ .. -..+...|+.+ |+.++..+.+..+
T Consensus 242 i~ik~~~~-GG-i~~i~~~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 242 FVIKTALF-GD-PDSLSLLLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp EEECHHHH-SC-HHHHHHHHHTTCCGGGEEEBCCSCCH
T ss_pred EEEChhhh-CC-HHHHHHHHHHhCCCCcEEEeCCcchH
Confidence 67665543 12 24788999999 9999888776544
No 158
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=24.67 E-value=3.4e+02 Score=23.41 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=54.4
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHH
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
..++.++..|-... -++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|
T Consensus 222 ~~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~~ia~~A 295 (372)
T 3tj4_A 222 DLDIYWFEEPLWYD-----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAG-AVAYVQPDVTRLGGITEYIQVADLA 295 (372)
T ss_dssp TSCEEEEESCSCTT-----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHH
T ss_pred hcCCCEEECCCCch-----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHH
Confidence 34667777775422 24556666665333 35556667888888888754 57888887665311 1124789999
Q ss_pred HHhCCceeeec
Q 022889 145 QLTGVKLITYG 155 (290)
Q Consensus 145 ~~~gi~via~s 155 (290)
+++|+.++..+
T Consensus 296 ~~~gi~~~~h~ 306 (372)
T 3tj4_A 296 LAHRLPVVPHA 306 (372)
T ss_dssp HHTTCCBCCCC
T ss_pred HHcCCEEEecC
Confidence 99999988765
No 159
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=24.31 E-value=1.2e+02 Score=22.75 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHH-----cCCCeeEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 106 NFDTERLRIILE-----NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 106 ~~~~~~l~~~~~-----~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+.+.+.+..++. .++.+..+-.--++-....+..++++|++.|+.+..|++
T Consensus 21 g~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~~ 76 (145)
T 2w6k_A 21 GCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAP 76 (145)
T ss_dssp TCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEECH
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeCH
Confidence 456666665553 344333333333332334567899999999999999974
No 160
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=24.27 E-value=51 Score=22.61 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcC
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 257 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~ 257 (290)
.+-+.|+.+.++.|+|..++|-+--.+...+....-|-+..+.+.+....++++.
T Consensus 28 ~ig~~lr~~R~~~gltq~elA~~~gis~~~is~iE~G~~~ps~~~l~~ia~~l~v 82 (99)
T 3g5g_A 28 KVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEV 82 (99)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCc
Confidence 4457888888889999988887665554444444445444446666666666543
No 161
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=23.71 E-value=3.6e+02 Score=23.52 Aligned_cols=68 Identities=7% Similarity=-0.048 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeec
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~s 155 (290)
++.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++...
T Consensus 240 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 240 AAEWAELAQAAPMPLAGGENIAGVAAFETALAAR-SLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT-CEEEECCCTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred HHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 4566677665333 44555667888888887754 58888887654311 112478999999999987554
No 162
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=23.61 E-value=43 Score=21.83 Aligned_cols=52 Identities=8% Similarity=0.002 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhc
Q 022889 205 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 205 ~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~ 256 (290)
.+.++.+.+..|+|..++|-+--.+...++...-|-+..+.+.+.....+++
T Consensus 14 ~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~i~~~l~ 65 (88)
T 2wiu_B 14 ANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLE 65 (88)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHCGGGCBHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhC
Confidence 3677888888888888887666444443333333433323455555555444
No 163
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=23.58 E-value=56 Score=21.61 Aligned_cols=22 Identities=9% Similarity=0.169 Sum_probs=17.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHH
Q 022889 206 QTLKRIASKHGVSIPVVAVRYI 227 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~ 227 (290)
+.++.+.++.|+|..++|-+--
T Consensus 16 ~~l~~~r~~~glsq~~lA~~~g 37 (91)
T 1x57_A 16 KVIQQGRQSKGLTQKDLATKIN 37 (91)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHC
Confidence 6788888888999888876543
No 164
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=23.57 E-value=1.7e+02 Score=25.39 Aligned_cols=73 Identities=10% Similarity=0.097 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+++|+.++..+.+.++
T Consensus 226 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 226 LDDIAAIRPLHSAPVSVDECLVTLQDAARVARDG-LAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCSH
T ss_pred HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC-CCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCH
Confidence 3445556555433 23344556778888877743 46777777654311 11247889999999999987766554
No 165
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=23.04 E-value=3.4e+02 Score=22.84 Aligned_cols=100 Identities=14% Similarity=0.026 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHHhhCCCcccEEEee-cCCC----CCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCe
Q 022889 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDY----SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 48 ~~~~i~~~~e~SL~~L~~d~iDl~~lH-~~~~----~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
+.+.+.+..++ +-.-|-|.||+=--- .|.. ....+..+...++.+++++. -|.|-++.++.++++++.|..
T Consensus 50 ~~~~a~~~a~~-~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~- 125 (294)
T 2dqw_A 50 DPERALERARE-MVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAH- 125 (294)
T ss_dssp ---CCHHHHHH-HHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCS-
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCC-
Confidence 34444444433 334588999985421 2321 11225667788888887643 478889999999999987633
Q ss_pred eEecccccccCCCcchHHHHHHHHhCCceeeecc
Q 022889 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.+ +..|.. ...++++.+++.|++++.+..
T Consensus 126 iI--NdVsg~---~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 126 LL--NDVTGL---RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp EE--ECSSCS---CCHHHHHHHHHHTCEEEEECC
T ss_pred EE--EECCCC---CChHHHHHHHHhCCCEEEEcC
Confidence 11 222222 345899999999999999874
No 166
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=22.97 E-value=3.1e+02 Score=22.41 Aligned_cols=59 Identities=7% Similarity=0.001 Sum_probs=31.5
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEE
Q 022889 37 LTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA 103 (290)
Q Consensus 37 ~~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iG 103 (290)
.+++-++....+.+.-..-++...+.-.+||||+=+-. -++....+.+..+++.++-|.
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~--------~~~~~~~l~~~a~~~~~kiI~ 144 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM--------GDEVIDEVVNFAHKKEVKVII 144 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG--------CHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc--------cHHHHHHHHHHHHhCCCEEEE
Confidence 34443444455666554545554444448999985421 134555555555556665553
No 167
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.90 E-value=1.6e+02 Score=19.44 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=37.3
Q ss_pred HHHHHHcCcccEEEccCCCHHHHHHHHHcC-CCeeEecccccccCCCcchHHHHHHHHhCCceeeec
Q 022889 90 LTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 90 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
++.+++.|++.. ...+...+++.+ ..+.++-...++ ..-..+..+|++.||+++-+.
T Consensus 3 ~~~~~kagk~~~------G~~~v~kai~~gkaklViiA~D~~~---~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII------GTKQTVKALKRGSVKEVVVAKDADP---ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE------SHHHHHHHHTTTCEEEEEEETTSCH---HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE------cHHHHHHHHHcCCeeEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEC
Confidence 677888888744 556777777644 234444444433 123467888999999998765
No 168
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=22.66 E-value=3.2e+02 Score=22.46 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=55.2
Q ss_pred HHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHH-HHcCcccEEEcc-------CCCHHHHHHHHHcCCCeeEe
Q 022889 54 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDL-KEEGKIKTVALT-------NFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 54 ~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l-~~~G~ir~iGvs-------~~~~~~l~~~~~~~~~~~~~ 125 (290)
+.++..|+.+| +|||.+=+-|-.....+ +++++...++ ++.|.--+.|=. .-..+...+.++ ...|+++
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~-~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k-~lGf~~i 102 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVID-RDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECE-KLGFEAV 102 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSC-HHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHH-HHTCCEE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecC-HHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHH-HcCCCEE
Confidence 45667777777 79999999887765542 5555554444 445554454432 112222222222 2336666
Q ss_pred cccccccCCCcc--hHHHHHHHHhCCceee
Q 022889 126 QVQHSVVDMRPQ--QKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~~~~--~~~~~~~~~~gi~via 153 (290)
.+-=..++...+ ..++..+++.|..++.
T Consensus 103 EiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 103 EISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 665444443332 3578888888887754
No 169
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=22.64 E-value=4.1e+02 Score=24.15 Aligned_cols=68 Identities=13% Similarity=0.200 Sum_probs=38.3
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCcccEEE-----------------------eecCCCCCccHHHHHHHHHHHH
Q 022889 38 TKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ-----------------------FHWWDYSNPGYLDALNHLTDLK 94 (290)
Q Consensus 38 ~k~~~~~~~~~~~~i~~~~e~SL~~L~~d~iDl~~-----------------------lH~~~~~~~~~~e~~~~l~~l~ 94 (290)
+++-+.....+.+.-.+-++..+ ++|.||||+=+ .|+++.. +..++....++++.
T Consensus 67 ~~~eGG~~~~~~~~~~~ll~~~~-~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~t-p~~~~~~~~~~~~~ 144 (523)
T 2o7s_A 67 PKWEGGQYEGDENERRDVLRLAM-ELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNT-PSVEDLDGLVARIQ 144 (523)
T ss_dssp BGGGTSSBCSCHHHHHHHHHHHH-HHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCC-CCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHH-HhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCC-cCHHHHHHHHHHHH
Confidence 34333333445554455555555 57899999632 2443332 33567777777777
Q ss_pred HcC--cccEEEccCC
Q 022889 95 EEG--KIKTVALTNF 107 (290)
Q Consensus 95 ~~G--~ir~iGvs~~ 107 (290)
+.| .+|-.+.++.
T Consensus 145 ~~gaDivKia~~a~~ 159 (523)
T 2o7s_A 145 QTGADIVKIATTAVD 159 (523)
T ss_dssp TTTCSEEEEEEECSS
T ss_pred HhCCCEEEEEecCCC
Confidence 777 4455555543
No 170
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=22.64 E-value=4.1e+02 Score=23.66 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccC--CCHHHHHHHHHcCCCeeE
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 124 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~ 124 (290)
++++...+.+.+.++.+ ++++|-.|-... -|+.+.+|.++.+|-=.|=-. ++.+.+..+++.+ -.++
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d-----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~-a~d~ 341 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED-----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKK-AADA 341 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT-----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc-----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhC-CCCE
Confidence 36666666666666654 578888886432 366777788777764444333 4689999998854 4677
Q ss_pred ecccccccCC-CcchHHHHHHHHhCCceeee
Q 022889 125 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 125 ~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
+|+..|-+-. ..-.++...|+.+|+.++..
T Consensus 342 i~ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 342 LLLKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 7776654311 11247889999999987653
No 171
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=22.48 E-value=3.3e+02 Score=23.70 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=42.8
Q ss_pred HHHHHHHHH-cCcccE-EEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeeccccc
Q 022889 87 LNHLTDLKE-EGKIKT-VALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~l~~-~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.++++ .-.|-= .+=+-++.+.++.+++.+ .++++|+..+-+-. ..-..+...|+++|+.++.. .+..
T Consensus 235 ~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h-~~es 308 (401)
T 2hzg_A 235 LAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG-RIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH-TFTS 308 (401)
T ss_dssp HHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC-CCSC
T ss_pred HHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC-CCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC-CCCc
Confidence 555666665 433322 223345677777777644 46777776554311 11247889999999998876 4443
No 172
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=22.41 E-value=2.4e+02 Score=23.45 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhhCCCc--ccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCC--HHHHHHHHHcCCCeeEe
Q 022889 50 SIVRESIDVSRRRMDVPC--LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD--TERLRIILENGIPVVSN 125 (290)
Q Consensus 50 ~~i~~~~e~SL~~L~~d~--iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~--~~~l~~~~~~~~~~~~~ 125 (290)
..+...+.+.|++.+.+. |-+=+-..... .+...+...+..|++.|-- |.+..|. ...+..+.. .+++.+
T Consensus 129 ~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~--~~~~~~~~~l~~Lr~~G~~--ialDDFGtG~ssl~~L~~--l~~d~i 202 (294)
T 2r6o_A 129 EHLTRAVDRALARSGLRPDCLELEITENVML--VMTDEVRTCLDALRARGVR--LALDDFGTGYSSLSYLSQ--LPFHGL 202 (294)
T ss_dssp GHHHHHHHHHHHHHCCCGGGEEEEEEGGGGG--GCCHHHHHHHHHHHHHTCE--EEEEEETSSCBCHHHHHH--SCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcCEEEEEEeCCchh--hChHHHHHHHHHHHHCCCE--EEEECCCCCchhHHHHHh--CCCCEE
Confidence 446677888888887643 22222221111 1146788899999999983 4443332 122333433 467777
Q ss_pred cccccccCCCc--------chHHHHHHHHhCCceeeec
Q 022889 126 QVQHSVVDMRP--------QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 126 q~~~n~~~~~~--------~~~~~~~~~~~gi~via~s 155 (290)
-+.-+++..-. -..++..|+..|+.++|=.
T Consensus 203 KID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG 240 (294)
T 2r6o_A 203 KIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG 240 (294)
T ss_dssp EECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec
Confidence 77766553211 1357889999999999844
No 173
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=22.39 E-value=1.4e+02 Score=25.07 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=40.9
Q ss_pred HHHHHHcCcccEEEccCCCHHHHHHHHHc--CCCeeEecc-------------cc-------cccCCCcchHHHHHHHHh
Q 022889 90 LTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQV-------------QH-------SVVDMRPQQKMAELCQLT 147 (290)
Q Consensus 90 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~q~-------------~~-------n~~~~~~~~~~~~~~~~~ 147 (290)
++.+++.|....+=+++|+...+..+.+. .++..+... +| ++-......++++.|+++
T Consensus 148 ~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~ 227 (292)
T 3mz2_A 148 AQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHER 227 (292)
T ss_dssp HHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHC
Confidence 33445567777788889999888887763 233222210 00 100011134789999999
Q ss_pred CCceeeecc
Q 022889 148 GVKLITYGT 156 (290)
Q Consensus 148 gi~via~sp 156 (290)
|+.|.+|.+
T Consensus 228 G~~V~vWTv 236 (292)
T 3mz2_A 228 GVMCMISTA 236 (292)
T ss_dssp TBCEEEECT
T ss_pred CCEEEEEeC
Confidence 999999864
No 174
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=22.08 E-value=3.9e+02 Score=23.64 Aligned_cols=67 Identities=12% Similarity=0.094 Sum_probs=42.4
Q ss_pred HHHHHHHHHc--CcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeee
Q 022889 87 LNHLTDLKEE--GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 87 ~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
++.+.++++. +.--..|=+-++.+.+..+++.+ ..+++|+..+-+-. ..-..+...|+++|+.+..+
T Consensus 282 ~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 282 VLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAG-AVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHT-CCSEECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 4455556554 22234455567888888887754 57788877664311 11246888999999998644
No 175
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=21.95 E-value=1.9e+02 Score=20.14 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022889 203 VLLQTLKRIASKHGVSIPVVAVRYIL 228 (290)
Q Consensus 203 ~~~~~l~~la~~~~~s~~q~al~~~l 228 (290)
++++++.++|..|++++.+++-.|+.
T Consensus 45 ~VldKc~ELC~~y~lda~e~VeeWmA 70 (101)
T 2keb_A 45 ALIEKLVELCVQYGQNEEGMVGELIA 70 (101)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 67799999999999998888866654
No 176
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=21.82 E-value=3.5e+02 Score=22.49 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=37.3
Q ss_pred HHHHHHcCcccEEEccCC----CHHHHHHHHHcCCCeeEe--cccccccCCCc-------chHHHHHHHHhCCceeeecc
Q 022889 90 LTDLKEEGKIKTVALTNF----DTERLRIILENGIPVVSN--QVQHSVVDMRP-------QQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 90 l~~l~~~G~ir~iGvs~~----~~~~l~~~~~~~~~~~~~--q~~~n~~~~~~-------~~~~~~~~~~~gi~via~sp 156 (290)
|.++.+... ..+|++-. +......+.+..+...+. .+.+..+.+.. .+.++++|+++||.+....+
T Consensus 4 l~~~~~~~~-~~~G~a~~~~~~~~~~~~~~~~~~fn~~t~en~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi~v~gh~l 82 (302)
T 1nq6_A 4 LGDAAAAKG-RYFGAAVAANHLGEAAYASTLDAQFGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQSKGMKVRGHTL 82 (302)
T ss_dssp HHHHHHTTT-CEEEEEECGGGTTSHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEE
T ss_pred hHHHHHhcC-CEEEEEcChhhcCCHHHHHHHHhcCCeEEEcCceeeccccCCCCcCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 455543322 47887732 223445555434444443 33444433322 25899999999999986655
Q ss_pred c
Q 022889 157 V 157 (290)
Q Consensus 157 l 157 (290)
+
T Consensus 83 v 83 (302)
T 1nq6_A 83 V 83 (302)
T ss_dssp E
T ss_pred c
Confidence 4
No 177
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=21.72 E-value=3.2e+02 Score=22.07 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=37.8
Q ss_pred HHHHHHHHc-CcccEEEccC-CCHHHHHHHHHcCCCeeEecccccccCCCcchHHHHHHHHhCCceee
Q 022889 88 NHLTDLKEE-GKIKTVALTN-FDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 88 ~~l~~l~~~-G~ir~iGvs~-~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
+.+++++++ +. ..+|..+ .+.++++.+++.|-.|.+. .....+++++|++.|+.++.
T Consensus 74 e~I~~l~~~~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvs--------P~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 74 EAIRLLRQAQPE-MLIGAGTILNGEQALAAKEAGATFVVS--------PGFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp HHHHHHHHHCTT-CEEEEECCCSHHHHHHHHHHTCSEEEC--------SSCCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhCCC-CEEeECCcCCHHHHHHHHHcCCCEEEe--------CCCCHHHHHHHHHcCCCEEc
Confidence 444444443 22 3566554 4789999998877666542 22356899999999999877
No 178
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=21.67 E-value=2.5e+02 Score=24.49 Aligned_cols=69 Identities=12% Similarity=0.015 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++.+.++++.-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 241 LIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKT-GISVVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHH-CCSEECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCeEecCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 3445566665333 23334445677777777643 46777777655311 1124688999999999987764
No 179
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=21.65 E-value=2.6e+02 Score=24.39 Aligned_cols=93 Identities=11% Similarity=0.164 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEec
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q 126 (290)
.+.+...+++.+ |.+.|.|-+++ ..+ ..+..+++..++++=.+=-++=-.|++..+..+++.+. +.
T Consensus 43 ~D~~atv~Qi~~-l~~aG~diVRv--------avp-~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~--dk-- 108 (366)
T 3noy_A 43 HDVEATLNQIKR-LYEAGCEIVRV--------AVP-HKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGV--HG-- 108 (366)
T ss_dssp TCHHHHHHHHHH-HHHTTCCEEEE--------ECC-SHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTC--SE--
T ss_pred cCHHHHHHHHHH-HHHcCCCEEEe--------CCC-ChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCC--Ce--
Confidence 456666666654 56789998887 122 25667889999888444333333588888888887653 33
Q ss_pred ccccccCCC---cchHHHHHHHHhCCceee
Q 022889 127 VQHSVVDMR---PQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 127 ~~~n~~~~~---~~~~~~~~~~~~gi~via 153 (290)
++.|+=|-. .-.++++.|+++|+++--
T Consensus 109 lRINPGNig~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 109 IRINPGNIGKEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp EEECHHHHSCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCcccCchhHHHHHHHHHHHcCCCEEE
Confidence 444543321 124799999999997754
No 180
>2ef8_A C.ECOT38IS, putative transcription factor; helix-turn-helix, DNA binding protein, transcription regulator; HET: CME; 1.95A {Enterobacteria phage P2}
Probab=21.61 E-value=94 Score=19.78 Aligned_cols=52 Identities=17% Similarity=0.072 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhh
Q 022889 204 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 204 ~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~ 255 (290)
+...++.+.++.|+|..++|-+--.+.+.++-..-|-+..+.+.+...+.++
T Consensus 11 ~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~~~~~l 62 (84)
T 2ef8_A 11 LVQLLTKLRKEASLSQSELAIFLGLSQSDISKIESFERRLDALELFELLEVV 62 (84)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 3477888888888888888876655544444444444433344444444443
No 181
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=21.56 E-value=4.1e+02 Score=23.30 Aligned_cols=59 Identities=8% Similarity=0.087 Sum_probs=37.6
Q ss_pred ccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccccccc
Q 022889 104 LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGGLL 162 (290)
Q Consensus 104 vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G~L 162 (290)
+...+.+.++++++......++....|+.-. ..-.++.+.|+++|+.++.=...+.|.+
T Consensus 152 v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 152 VDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL 211 (430)
T ss_dssp ECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT
T ss_pred eCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 3333667777666433345555556666432 2235899999999999998777765544
No 182
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=21.51 E-value=50 Score=16.31 Aligned_cols=10 Identities=20% Similarity=0.667 Sum_probs=8.3
Q ss_pred HHHHHHHHhh
Q 022889 12 EDLYGIFINR 21 (290)
Q Consensus 12 E~~lG~~l~~ 21 (290)
.+++|+||+.
T Consensus 3 qellgqwlkd 12 (26)
T 1rij_A 3 QELLGQWLKD 12 (26)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 4789999986
No 183
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=21.43 E-value=2.9e+02 Score=24.13 Aligned_cols=80 Identities=13% Similarity=-0.078 Sum_probs=50.4
Q ss_pred cccEEEeecCCCCCccHHHHHHHHHHHHH------cCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCc--ch
Q 022889 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKE------EGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP--QQ 138 (290)
Q Consensus 67 ~iDl~~lH~~~~~~~~~~e~~~~l~~l~~------~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~--~~ 138 (290)
-++++++..|-+ .+ ++.+.++++ .+..-+.|-+-+ .+.+..+++.+ -++++|+..+- ... -.
T Consensus 226 ~~~l~~iEeP~~--~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~-a~dii~~d~~~--GGitea~ 295 (392)
T 3v5c_A 226 DVNLYWLEAAFH--ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRG-RVDVLQYDIIW--PGFTHWM 295 (392)
T ss_dssp TSCCCEEECSSS--CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTT-SCCEECCBTTT--BCHHHHH
T ss_pred cCCCeEEeCCCC--cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcC-CCcEEEeCCCC--CCHHHHH
Confidence 346666777654 12 233444444 244456666666 66777777644 57888888763 221 24
Q ss_pred HHHHHHHHhCCceeeecc
Q 022889 139 KMAELCQLTGVKLITYGT 156 (290)
Q Consensus 139 ~~~~~~~~~gi~via~sp 156 (290)
.+...|+..|+.+...++
T Consensus 296 kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 296 ELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHcCCeEEecCC
Confidence 688899999999987764
No 184
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=21.28 E-value=4.2e+02 Score=23.20 Aligned_cols=94 Identities=10% Similarity=0.066 Sum_probs=53.3
Q ss_pred HHHHhhCCCcccEEEeecC-------CCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHcCCCeeEeccccc
Q 022889 58 VSRRRMDVPCLDMLQFHWW-------DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHS 130 (290)
Q Consensus 58 ~SL~~L~~d~iDl~~lH~~-------~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n 130 (290)
.+|+.||.+|=|+-.+|.. |.... .+++ ..|-.. .--.+=.|+.+.+.+..+++.+..+.-+..-.|
T Consensus 73 ~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~-~~ei----a~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HN 146 (372)
T 2p0o_A 73 EALKRAGFSFDELEPLIELGVTGLRMDYGIT-IEQM----AHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHN 146 (372)
T ss_dssp HHHHTTTCBTTBCHHHHHHTCCEEEECSSCC-HHHH----HHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCC-HHHH----HHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeec
Confidence 4566666666666555543 22222 2222 223223 334667788889999999986544333333333
Q ss_pred ccCCCcc--------hHHHHHHHHhCCceeeecccc
Q 022889 131 VVDMRPQ--------QKMAELCQLTGVKLITYGTVM 158 (290)
Q Consensus 131 ~~~~~~~--------~~~~~~~~~~gi~via~spl~ 158 (290)
.- +.+. .+--.+.++.||.+.|+-|=.
T Consensus 147 FY-Pr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~ 181 (372)
T 2p0o_A 147 YY-PRPETGIGTTFFNEKNRWLKELGLQVFTFVPGD 181 (372)
T ss_dssp CC-CSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cC-CCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 32 2222 244556788899999998753
No 185
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=21.15 E-value=2.5e+02 Score=23.13 Aligned_cols=110 Identities=9% Similarity=-0.013 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCcccEEEccCCCHHHHHHHHHc-CCCeeEeccccc
Q 022889 52 VRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHS 130 (290)
Q Consensus 52 i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n 130 (290)
+.++++-..+-+ -+.=-+.++..+.... .....+.++++.++.-+..+-....+...+..+... .-..+++.....
T Consensus 126 ~~~~l~l~~~l~-P~~k~vgvi~~~~~~~--s~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d 202 (302)
T 3lkv_A 126 VEQHVELIKEIL-PNVKSIGVVYNPGEAN--AVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAIAEKSDVIYALID 202 (302)
T ss_dssp HHHHHHHHHHHS-TTCCEEEEEECTTCHH--HHHHHHHHHHHHHHTTCEEEEEECSSGGGHHHHHHHHHTTCSEEEECSC
T ss_pred HHHHHHHHHHhC-CCCCEEEEEeCCCccc--HHHHHHHHHHHHHHcCCEEEEEecCChHHHHHHHHhccCCeeEEEEeCC
Confidence 567776555444 2333445566664321 233445555554443344443333333333333321 112344333221
Q ss_pred ccCCCcchHHHHHHHHhCCceeeeccc--ccccccc
Q 022889 131 VVDMRPQQKMAELCQLTGVKLITYGTV--MGGLLSE 164 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~gi~via~spl--~~G~L~~ 164 (290)
-........+...+.+.++++++.... .+|.|.+
T Consensus 203 ~~~~~~~~~i~~~~~~~~iPv~~~~~~~v~~G~l~~ 238 (302)
T 3lkv_A 203 NTVASAIEGMIVAANQAKTPVFGAATSYVERGAIAS 238 (302)
T ss_dssp HHHHHTHHHHHHHHHHTTCCEEESSHHHHHTTCSEE
T ss_pred cchhhHHHHHHHHHhhcCCceeecccccccCCceEE
Confidence 111122346778899999999998654 4565554
No 186
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=20.98 E-value=2.2e+02 Score=24.95 Aligned_cols=68 Identities=15% Similarity=0.040 Sum_probs=43.2
Q ss_pred HHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecc
Q 022889 88 NHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 88 ~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
+.+.+++++-.| -..|=+-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..++
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~~ 320 (400)
T 4dxk_A 251 SSLTRYAAVSPAPISASETLGSRWAFRDLLETG-AAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHXC 320 (400)
T ss_dssp GGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTT-CCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-C
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 345556555333 34444556777888887744 57788877665311 1124688999999999988764
No 187
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=20.97 E-value=74 Score=20.12 Aligned_cols=47 Identities=17% Similarity=0.165 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcCc
Q 022889 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK 98 (290)
Q Consensus 47 ~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G~ 98 (290)
.+.+.+...+.+.++. ..+ . -++| ..|...+ +..++..|..+++.|.
T Consensus 27 v~~~~L~~~l~~~~~~-~~~-~-~V~I-~aD~~~~-y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDK-DNN-T-LFLV-GGAKEVP-YEEVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHH-CTT-C-CEEE-EECTTSC-HHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhh-CCC-c-eEEE-EcCCCCC-HHHHHHHHHHHHHcCC
Confidence 3566666666555433 222 1 2334 4555566 8999999999999884
No 188
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=20.97 E-value=2e+02 Score=25.36 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCcc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeecccc
Q 022889 87 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVM 158 (290)
Q Consensus 87 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~ 158 (290)
++.+.+++++-.| -+.|=|-++.+.+..+++.+ .++++|+..+-+-. ..-..+...|+.+|+.++..+...
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~e 322 (398)
T 4dye_A 250 IEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLN-AVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHSGGE 322 (398)
T ss_dssp HHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCC
T ss_pred HHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhC-CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcCCcc
Confidence 4455555554322 34444556677777776643 46666666544311 112468899999999999987443
No 189
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=20.90 E-value=38 Score=21.34 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=14.6
Q ss_pred HHHHHHHHHhCCCHHHHHHHH
Q 022889 206 QTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~ 226 (290)
+.++.+..+.|+|..++|-+-
T Consensus 11 ~~l~~~r~~~glsq~~lA~~~ 31 (73)
T 3omt_A 11 NRLKSVLAEKGKTNLWLTETL 31 (73)
T ss_dssp BCHHHHHHHHTCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 456677777788888777543
No 190
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=20.88 E-value=2.8e+02 Score=21.44 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHHHHH--hhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHc---CcccEEEccCCCHHHHHHHHHcCC
Q 022889 46 KMTSSIVRESIDVSRR--RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~--~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~ 120 (290)
..+-+.|.+.+++--+ .+|+ .++.++- +. -.++++.+.+.... |.|-.-|.-+|+.-.+..++. .+
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~-~l~~~QS------N~-EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~-~v 103 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDV-ELEFFQT------NF-EGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIM-LA 103 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCE-EEEEEEC------SC-HHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHH-TS
T ss_pred cCCHHHHHHHHHHHhccccCCC-EEEEEee------Cc-HHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHH-hC
Confidence 3577889999998888 8886 3555542 12 37889999999876 566677777877777777776 34
Q ss_pred CeeEecccccccCC
Q 022889 121 PVVSNQVQHSVVDM 134 (290)
Q Consensus 121 ~~~~~q~~~n~~~~ 134 (290)
..-++.+..|-+..
T Consensus 104 ~~P~VEVHiSNi~a 117 (176)
T 2c4w_A 104 GKPVIEVHLTNIQA 117 (176)
T ss_dssp SSCEEEEESSCGGG
T ss_pred CCCEEEEEecCccc
Confidence 55566777665543
No 191
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=20.66 E-value=2.3e+02 Score=24.70 Aligned_cols=83 Identities=12% Similarity=-0.057 Sum_probs=50.1
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHHc-----Ccc-cEEEccCCCHHHHHHHHHcCCCeeEecccccccCCCc-chHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP-QQKM 140 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~-~~~~ 140 (290)
.++.++..|-. . -++.+.++++. -.| -..|= -++.+.++.+++.+ ..+++|+..+-+ .-. -..+
T Consensus 227 ~~i~~iE~P~~--~----d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~-~~d~v~ik~~~~-Git~~~~i 297 (392)
T 3p3b_A 227 VNLYWLEEAFH--E----DEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRG-RVDVLQYDIIWP-GFTHWMEL 297 (392)
T ss_dssp SCEEEEECSSS--C----CHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTT-SCCEECCBTTTB-CHHHHHHH
T ss_pred cCCCEEecCCc--c----cHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcC-CCCEEEeCcccc-CHHHHHHH
Confidence 34556666654 2 23445555554 233 22233 55677788887744 578888877664 221 2478
Q ss_pred HHHHHHhCCceeeecccccc
Q 022889 141 AELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 141 ~~~~~~~gi~via~spl~~G 160 (290)
...|+++|+.++.. .+..+
T Consensus 298 ~~~A~~~gi~~~~h-~~es~ 316 (392)
T 3p3b_A 298 GEKLDAHGLRSAPH-CYGNA 316 (392)
T ss_dssp HHHHHHTTCEECCB-CCSCT
T ss_pred HHHHHHcCCEEEec-CCCCH
Confidence 89999999998886 44333
No 192
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=20.62 E-value=43 Score=21.05 Aligned_cols=21 Identities=10% Similarity=0.083 Sum_probs=13.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHH
Q 022889 206 QTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~ 226 (290)
+.++.+.++.|+|..++|-.-
T Consensus 13 ~~l~~~r~~~g~s~~~lA~~~ 33 (76)
T 3bs3_A 13 NRIKVVLAEKQRTNRWLAEQM 33 (76)
T ss_dssp BCHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 345666666677777766554
No 193
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=20.56 E-value=76 Score=20.83 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCceeeeecccCCcHHHHHHhhhhhcC
Q 022889 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 257 (290)
Q Consensus 206 ~~l~~la~~~~~s~~q~al~~~l~~~~v~~~l~g~~~~~~~~l~enl~a~~~ 257 (290)
+.++.+-.+.|+|..++|-+.-.+...++-..-|-+..+.+.+.....+++.
T Consensus 20 ~~l~~~R~~~glsq~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ia~~l~v 71 (92)
T 1lmb_3 20 AIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKV 71 (92)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCC
Confidence 5555566778888888887665554444444444433335556555555544
No 194
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=20.42 E-value=4e+02 Score=23.69 Aligned_cols=82 Identities=5% Similarity=-0.031 Sum_probs=52.0
Q ss_pred ccEEEeecCCCCCccHHHHHHHHHHHHH----cCcccEEEccCCCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHH
Q 022889 68 LDMLQFHWWDYSNPGYLDALNHLTDLKE----EGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAE 142 (290)
Q Consensus 68 iDl~~lH~~~~~~~~~~e~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~ 142 (290)
.+++++..|-.... +..+.++++ .+.--+.|=+-++.+.+..+++.+ -++++|+..+-+-. ..-..+..
T Consensus 271 ~~~~~iEeP~~~~d-----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~-a~div~~d~~~~GGit~~~kia~ 344 (441)
T 4a35_A 271 FKPLWIEEPTSPDD-----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAK-ALQFLQIDSCRLGSVNENLSVLL 344 (441)
T ss_dssp GCCSEEECCSCTTC-----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTT-CCSEECCCTTTSSHHHHHHHHHH
T ss_pred cCccEEeCCCCccc-----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHH
Confidence 44556666644221 334445554 344456677778888888888754 57888887765311 11246889
Q ss_pred HHHHhCCceeeec
Q 022889 143 LCQLTGVKLITYG 155 (290)
Q Consensus 143 ~~~~~gi~via~s 155 (290)
.|+.+|+.+..++
T Consensus 345 lA~~~gv~v~~H~ 357 (441)
T 4a35_A 345 MAKKFEIPVCPHA 357 (441)
T ss_dssp HHHHTTCCBCCCC
T ss_pred HHHHcCCEEEEeC
Confidence 9999999987553
No 195
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=20.37 E-value=1.2e+02 Score=25.09 Aligned_cols=55 Identities=7% Similarity=-0.036 Sum_probs=32.2
Q ss_pred EEEccCCC---------HHHHHHHHHcCCCeeEeccccc-ccCC--CcchHHHHHHHHhCCceeeeccc
Q 022889 101 TVALTNFD---------TERLRIILENGIPVVSNQVQHS-VVDM--RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 101 ~iGvs~~~---------~~~l~~~~~~~~~~~~~q~~~n-~~~~--~~~~~~~~~~~~~gi~via~spl 157 (290)
.+|++++. .+.+..+.+.| ++.+++... +... ....++...+++.|+.+.+..++
T Consensus 22 klg~~~~~~~~~~~~~~l~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~ 88 (309)
T 2hk0_A 22 KHGIYYSYWEHEWSAKFGPYIEKVAKLG--FDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGP 88 (309)
T ss_dssp EEEEEGGGGCSCTTSCSHHHHHHHHHTT--CSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eeEEehhhcccccccccHHHHHHHHHhC--CCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCC
Confidence 47777543 22355555544 556665532 1111 12346888999999999987665
No 196
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=20.29 E-value=4.2e+02 Score=22.90 Aligned_cols=98 Identities=15% Similarity=0.039 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcccEEEeecCCCCCccHHHHHHHHHHHHHcC-ccc-EEEccCCCHHHHHHHHHcCCCee
Q 022889 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIK-TVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 46 ~~~~~~i~~~~e~SL~~L~~d~iDl~~lH~~~~~~~~~~e~~~~l~~l~~~G-~ir-~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
.++.+...+-++. |+..| .++.++..|-.. +-++.+.++++.- .|- ..|=+- +.+.++.+++.+ .++
T Consensus 200 ~~~~~~a~~~~~~-l~~~g---~~i~~iEqP~~~-----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~-~~d 268 (389)
T 2oz8_A 200 AWTSKEALTKLVA-IREAG---HDLLWVEDPILR-----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAH-AAD 268 (389)
T ss_dssp CBCHHHHHHHHHH-HHHTT---CCCSEEESCBCT-----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTT-CCS
T ss_pred CCCHHHHHHHHHH-HHhcC---CCceEEeCCCCC-----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcC-CCC
Confidence 3455555544433 56522 233345565432 1345566676653 442 333344 788888888744 577
Q ss_pred EecccccccCCCcchHHHHHHHHhCCceeee-ccc
Q 022889 124 SNQVQHSVVDMRPQQKMAELCQLTGVKLITY-GTV 157 (290)
Q Consensus 124 ~~q~~~n~~~~~~~~~~~~~~~~~gi~via~-spl 157 (290)
++|+.-.+ ..-..+...|+.+|+.++.. +.+
T Consensus 269 ~v~ikGGi---t~a~~i~~~A~~~gi~~~~~~~~~ 300 (389)
T 2oz8_A 269 ILNVHGQV---TDVMRIGWLAAELGIPISIGNTFL 300 (389)
T ss_dssp EEEECSCH---HHHHHHHHHHHHHTCCEEECCCGG
T ss_pred EEEECcCH---HHHHHHHHHHHHcCCeEeecccHH
Confidence 77776000 11247888999999999988 443
No 197
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=20.27 E-value=2.5e+02 Score=23.51 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=22.3
Q ss_pred HHHHHHH-HHHHcCcccEEEccCCCHHHHHHHHH
Q 022889 85 DALNHLT-DLKEEGKIKTVALTNFDTERLRIILE 117 (290)
Q Consensus 85 e~~~~l~-~l~~~G~ir~iGvs~~~~~~l~~~~~ 117 (290)
++.+.+. .+++.|....+=+++|+...+..+.+
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~ 198 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRR 198 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHH
Confidence 3344333 34455777778889999988888876
No 198
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=20.14 E-value=4.1e+02 Score=22.70 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHcCCCeeEecccccccCC-CcchHHHHHHHHhCCceeeeccccccc
Q 022889 107 FDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 107 ~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
.+.+.++++++......++....|+.-. .+-.++.+.|+++|+.++.=...+.+.
T Consensus 139 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~ 194 (392)
T 3qhx_A 139 ADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPA 194 (392)
T ss_dssp TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT
T ss_pred CCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccc
Confidence 3566666665433334445555555421 224689999999999999887776554
Done!