Your job contains 1 sequence.
>022892
MDPSTALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKAN
RTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQT
DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR
NLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME
VHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNIDLTPFRD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022892
(290 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206375 - symbol:AtkdsA1 species:3702 "Arabido... 1116 4.1e-113 1
TIGR_CMR|CBU_1675 - symbol:CBU_1675 "2-dehydro-3-deoxypho... 644 4.2e-63 1
TIGR_CMR|SO_3827 - symbol:SO_3827 "2-dehydro-3-deoxyphosp... 624 5.5e-61 1
TIGR_CMR|GSU_1894 - symbol:GSU_1894 "2-dehydro-3-deoxypho... 616 3.9e-60 1
TIGR_CMR|CPS_3547 - symbol:CPS_3547 "3-deoxy-8-phosphooct... 609 2.2e-59 1
TIGR_CMR|SPO_0947 - symbol:SPO_0947 "3-deoxy-8-phosphooct... 589 2.8e-57 1
UNIPROTKB|P0A715 - symbol:kdsA "3-deoxy-D-manno-octuloson... 587 4.6e-57 1
UNIPROTKB|Q9KQ29 - symbol:kdsA "2-dehydro-3-deoxyphosphoo... 566 7.8e-55 1
TIGR_CMR|VC_2175 - symbol:VC_2175 "2-dehydro-3-deoxyphosp... 566 7.8e-55 1
TIGR_CMR|CJE_0433 - symbol:CJE_0433 "3-deoxy-8-phosphooct... 554 1.5e-53 1
TIGR_CMR|DET_1486 - symbol:DET_1486 "phospho-2-dehydro-3-... 246 6.3e-21 1
TIGR_CMR|BA_2958 - symbol:BA_2958 "chorismate mutase/phos... 235 1.1e-19 1
TIGR_CMR|CHY_1930 - symbol:CHY_1930 "phospho-2-dehydro-3-... 231 2.5e-19 1
TIGR_CMR|CHY_1037 - symbol:CHY_1037 "phospho-2-dehydro-3-... 228 5.1e-19 1
TIGR_CMR|GSU_3142 - symbol:GSU_3142 "phospho-2-dehydro-3-... 221 3.3e-18 1
TIGR_CMR|GSU_3333 - symbol:GSU_3333 "phospho-2-dehydro-3-... 215 1.6e-17 1
TIGR_CMR|CHY_0475 - symbol:CHY_0475 "phospho-2-dehydro-3-... 213 2.8e-17 1
TIGR_CMR|CHY_1588 - symbol:CHY_1588 "phospho-2-dehydro-3-... 208 6.7e-17 1
TIGR_CMR|DET_0468 - symbol:DET_0468 "phospho-2-dehydro-3-... 196 5.1e-14 1
>TAIR|locus:2206375 [details] [associations]
symbol:AtkdsA1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IEA;ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS;IDA]
[GO:0010306 "rhamnogalacturonan II biosynthetic process"
evidence=TAS] [GO:0009860 "pollen tube growth" evidence=IGI]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=IDA] [GO:0048868 "pollen tube development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 EMBL:CP002684 GO:GO:0005829 Gene3D:3.20.20.70
KO:K01627 GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
OMA:LCDRGTC IPI:IPI00938987 RefSeq:NP_001154477.1 UniGene:At.19978
ProteinModelPortal:F4IF58 SMR:F4IF58 PRIDE:F4IF58
EnsemblPlants:AT1G79500.5 GeneID:844288 KEGG:ath:AT1G79500
GO:GO:0010306 Uniprot:F4IF58
Length = 336
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 212/238 (89%), Positives = 223/238 (93%)
Query: 35 MAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDV 94
MAKHIK ISTKVGLPLVFKSSFDKANRTSSKSFRGPGM EGLKILEKVK+AYD+PIVTDV
Sbjct: 1 MAKHIKDISTKVGLPLVFKSSFDKANRTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDV 60
Query: 95 HETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154
HE+ QCE VGKVADIIQIPAFLCRQTDLLVAAA+TGKIINIKKGQFCA SVM NSAEK+R
Sbjct: 61 HESSQCEAVGKVADIIQIPAFLCRQTDLLVAAAQTGKIINIKKGQFCAPSVMENSAEKIR 120
Query: 155 LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVA 214
LAGNPNVMVCERGTMFGYNDLIVDPRN EWMREANCPVVAD+THSLQQPAGKKLDGGGVA
Sbjct: 121 LAGNPNVMVCERGTMFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVA 180
Query: 215 SGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNXXXXXXXXVAIA 272
SGGLRELIPCIARTA+AVGVDG+FMEVHDDPL+APVDGPTQWPLR+ +AIA
Sbjct: 181 SGGLRELIPCIARTAVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIA 238
>TIGR_CMR|CBU_1675 [details] [associations]
symbol:CBU_1675 "2-dehydro-3-deoxyphosphooctonate
aldolase" species:227377 "Coxiella burnetii RSA 493" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:NP_820657.1 ProteinModelPortal:Q83B43
PRIDE:Q83B43 GeneID:1209586 KEGG:cbu:CBU_1675 PATRIC:17932091
OMA:CAKLNIP BioCyc:CBUR227377:GJ7S-1646-MONOMER Uniprot:Q83B43
Length = 280
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 127/243 (52%), Positives = 161/243 (66%)
Query: 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG 75
P FL+AGP VIESE +M +A +KSI+ ++ +P +FK+SFDKANR+S S+RGPG+ +G
Sbjct: 15 PLFLIAGPCVIESEALVMDVAGELKSITQQLDMPFIFKASFDKANRSSHLSYRGPGIEKG 74
Query: 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINI 135
L ILEKVK ++PI+TDVHE +EV V D++Q PAFLCRQ++ + + A GK +NI
Sbjct: 75 LTILEKVKKTLEVPIITDVHEDTPLQEVAAVVDVLQTPAFLCRQSNFIRSVAACGKPVNI 134
Query: 136 KKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 195
KKGQF A M K GN +MVCERG FGYN+LI D R L +RE CPV+ D
Sbjct: 135 KKGQFLAPWEMKQVVAKAWATGNKKIMVCERGYSFGYNNLISDMRALAILRETACPVIFD 194
Query: 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQ 255
THS+Q P G G SGG RE +P +AR A A G+ G+FME H DP A DGP
Sbjct: 195 ATHSVQLPGGH-----GTNSGGQREFVPVLARAATAAGIAGIFMETHPDPDRALSDGPNS 249
Query: 256 WPL 258
WPL
Sbjct: 250 WPL 252
>TIGR_CMR|SO_3827 [details] [associations]
symbol:SO_3827 "2-dehydro-3-deoxyphosphooctonate aldolase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 OMA:FNVPLIT RefSeq:NP_719360.1
ProteinModelPortal:Q8EAR9 SMR:Q8EAR9 PRIDE:Q8EAR9 GeneID:1171472
KEGG:son:SO_3827 PATRIC:23527340 Uniprot:Q8EAR9
Length = 282
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 122/244 (50%), Positives = 170/244 (69%)
Query: 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVE 74
+PF L G NV+ES + M +A+ ++ K+G+P VFK+SFDKANR+S S+RGPGM E
Sbjct: 17 KPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDKANRSSVNSYRGPGMEE 76
Query: 75 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 134
GLKI E++K +++P++TDVHET QC V +V DIIQ+PAFL RQTDL+VA AKTG IIN
Sbjct: 77 GLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLARQTDLVVAMAKTGAIIN 136
Query: 135 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA 194
+KK QF A M + K AGN +++CERG+ FGYN+L+VD ++ M+++ PV+
Sbjct: 137 VKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVDMLGMDEMKQSGYPVIF 196
Query: 195 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 254
D TH+LQ+P G+ D ++GG R +AR+ +A+G+ G+F+E H DP NA DGP
Sbjct: 197 DATHALQRPGGRA-D----SAGGRRAQATELARSGMALGLAGLFIEAHPDPDNAKCDGPC 251
Query: 255 QWPL 258
PL
Sbjct: 252 ALPL 255
>TIGR_CMR|GSU_1894 [details] [associations]
symbol:GSU_1894 "2-dehydro-3-deoxyphosphooctonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:NP_952943.1 ProteinModelPortal:P61655
SMR:P61655 GeneID:2686233 KEGG:gsu:GSU1894 PATRIC:22026653
BioCyc:GSUL243231:GH27-1922-MONOMER Uniprot:P61655
Length = 272
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 121/238 (50%), Positives = 163/238 (68%)
Query: 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG 75
P L+AGP VIE+E +R A+ + +I V + LVFK+S+DKANRTS SFRGPGM EG
Sbjct: 17 PLVLIAGPCVIENEAATLRCAERLMTICNGVSVSLVFKASYDKANRTSVTSFRGPGMQEG 76
Query: 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINI 135
L+IL+KVK + IP+++D+H Q + +V DIIQ+PAFLCRQTDL+V +T +++N+
Sbjct: 77 LRILQKVKDSLGIPVISDIHSIEQVKPAAEVLDIIQVPAFLCRQTDLVVEVGRTNRVVNV 136
Query: 136 KKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 195
KKGQF A M N K+ GN +++ ERG FGYN+L+ D R+L MR PVV D
Sbjct: 137 KKGQFMAPWDMENVVGKILSTGNERIILTERGVTFGYNNLVSDMRSLPIMRRIGFPVVFD 196
Query: 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253
THS+Q P G+ GG +SGG RE + ++R A+A G+DG+FMEVH+DP A DGP
Sbjct: 197 ATHSVQLPGGQ----GG-SSGGQREFVEYLSRAAVATGIDGIFMEVHEDPEKALCDGP 249
>TIGR_CMR|CPS_3547 [details] [associations]
symbol:CPS_3547 "3-deoxy-8-phosphooctulonate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:YP_270221.1 HSSP:O66496
ProteinModelPortal:Q47Y99 SMR:Q47Y99 STRING:Q47Y99 PRIDE:Q47Y99
GeneID:3520710 KEGG:cps:CPS_3547 PATRIC:21470025 OMA:FNVPLIT
BioCyc:CPSY167879:GI48-3575-MONOMER Uniprot:Q47Y99
Length = 280
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 120/263 (45%), Positives = 175/263 (66%)
Query: 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVE 74
+PF L G NV+ES + M++A+H ++ K+G+P VFK+SFDKANR+S S+RGPG+ E
Sbjct: 17 QPFVLFGGMNVLESRDLAMKIAEHYVEVTQKLGIPYVFKASFDKANRSSVNSYRGPGLDE 76
Query: 75 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 134
GLKI E++K +++PI+TDVHE+ Q + V +V D+IQ+PAFL RQTDL+VA AKTG +IN
Sbjct: 77 GLKIFEEIKSTFNVPIITDVHESYQAQPVSEVVDVIQLPAFLARQTDLVVAMAKTGAVIN 136
Query: 135 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA 194
+KK QF A+ M + K AGN N+++CERG+ +GYN+L+VD ++ M+ PV+
Sbjct: 137 VKKPQFLAAHEMKHIITKFGEAGNENIILCERGSCYGYNNLVVDMLAMDEMKNY-APVIF 195
Query: 195 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 254
D TH+LQ+P G+ D ++ G R +AR+ +A+G+ G+F+E H DP A DGP
Sbjct: 196 DATHALQKPGGRS-D----SADGRRAQAAQLARSGMAIGIAGLFIEAHPDPSAAKCDGPC 250
Query: 255 QWPLRNXXXXXXXXVAIAKVSKG 277
PL A+ + KG
Sbjct: 251 ALPLDKLEPYLAQMKALDDLVKG 273
>TIGR_CMR|SPO_0947 [details] [associations]
symbol:SPO_0947 "3-deoxy-8-phosphooctulonate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019294 HOGENOM:HOG000023021
KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198 UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
RefSeq:YP_166200.1 ProteinModelPortal:Q5LUV5 GeneID:3195476
KEGG:sil:SPO0947 PATRIC:23375179 Uniprot:Q5LUV5
Length = 277
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 116/238 (48%), Positives = 151/238 (63%)
Query: 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG 75
P ++AGP +ES +H +A +K G VFK+S+DKANRTS RG G+ G
Sbjct: 16 PLTIIAGPCQLESADHAQMIAGTLKEACDAAGAQYVFKASYDKANRTSLGGKRGMGIDAG 75
Query: 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINI 135
LK+L+ ++ +P++TDVH QC + D++QIPAFLCRQTD+L+AA TG +IN+
Sbjct: 76 LKVLDDIRRTMGVPVLTDVHSEAQCAIAAEAVDVLQIPAFLCRQTDMLLAAGNTGAVINV 135
Query: 136 KKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 195
KKGQF A M N +K+ GN N+++ ERG FGYN L+ D R L M + PVV D
Sbjct: 136 KKGQFLAPWEMGNIVDKIASTGNENILLTERGVSFGYNTLVADMRALPIMAQTGYPVVMD 195
Query: 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253
THS+QQP G+ GG +SGG RE P +AR A+AVG VFME H DP NAP DGP
Sbjct: 196 ATHSVQQPGGR----GG-SSGGQREFAPVMARAAVAVGTAAVFMETHQDPDNAPCDGP 248
>UNIPROTKB|P0A715 [details] [associations]
symbol:kdsA "3-deoxy-D-manno-octulosonate 8-phosphate
synthase" species:83333 "Escherichia coli K-12" [GO:0005829
"cytosol" evidence=IDA] [GO:0008676 "3-deoxy-8-phosphooctulonate
synthase activity" evidence=IEA;IDA] HAMAP:MF_00056
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 UniPathway:UPA00030 GO:GO:0005829 Gene3D:3.20.20.70
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:U18555 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 OMA:FNVPLIT EMBL:X05552 PIR:I83573
RefSeq:NP_415733.1 RefSeq:YP_489482.1 PDB:1D9E PDB:1G7U PDB:1G7V
PDB:1GG0 PDB:1PHQ PDB:1PHW PDB:1PL9 PDB:1Q3N PDB:1X6U PDB:1X8F
PDBsum:1D9E PDBsum:1G7U PDBsum:1G7V PDBsum:1GG0 PDBsum:1PHQ
PDBsum:1PHW PDBsum:1PL9 PDBsum:1Q3N PDBsum:1X6U PDBsum:1X8F
ProteinModelPortal:P0A715 SMR:P0A715 DIP:DIP-35940N IntAct:P0A715
MINT:MINT-1220797 SWISS-2DPAGE:P0A715 PaxDb:P0A715 PRIDE:P0A715
EnsemblBacteria:EBESCT00000001290 EnsemblBacteria:EBESCT00000001291
EnsemblBacteria:EBESCT00000014294 GeneID:12931123 GeneID:945785
KEGG:ecj:Y75_p1187 KEGG:eco:b1215 PATRIC:32117682 EchoBASE:EB0513
EcoGene:EG10518 BioCyc:EcoCyc:KDO-8PSYNTH-MONOMER
BioCyc:ECOL316407:JW1206-MONOMER BioCyc:MetaCyc:KDO-8PSYNTH-MONOMER
SABIO-RK:P0A715 EvolutionaryTrace:P0A715 Genevestigator:P0A715
Uniprot:P0A715
Length = 284
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 120/269 (44%), Positives = 171/269 (63%)
Query: 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG 75
PF L G NV+ES + MR+ +H +++ K+G+P VFK+SFDKANR+S S+RGPG+ EG
Sbjct: 18 PFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEG 77
Query: 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINI 135
+KI +++K + + I+TDVHE Q + V V D+IQ+PAFL RQTDL+ A AKTG +IN+
Sbjct: 78 MKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINV 137
Query: 136 KKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREA--NCPVV 193
KK QF + M N +K + GN V++C+RG FGY++L+VD M++ N PV+
Sbjct: 138 KKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVI 197
Query: 194 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253
DVTH+LQ D G ASGG R + +AR +AVG+ G+F+E H DP +A DGP
Sbjct: 198 FDVTHALQCR-----DPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGP 252
Query: 254 TQWPLRNXXXXXXXXVAIAKVSKGKQRMN 282
+ PL AI + KG + ++
Sbjct: 253 SALPLAKLEPFLKQMKAIDDLVKGFEELD 281
>UNIPROTKB|Q9KQ29 [details] [associations]
symbol:kdsA "2-dehydro-3-deoxyphosphooctonate aldolase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008676 "3-deoxy-8-phosphooctulonate synthase activity"
evidence=ISS] [GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid
biosynthetic process" evidence=ISS] HAMAP:MF_00056
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0019294
eggNOG:COG2877 KO:K01627 ProtClustDB:PRK05198 UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362 PIR:F82108
RefSeq:NP_231806.1 ProteinModelPortal:Q9KQ29 SMR:Q9KQ29
PRIDE:Q9KQ29 DNASU:2613311 GeneID:2613311 KEGG:vch:VC2175
PATRIC:20083363 OMA:LCDRGTC Uniprot:Q9KQ29
Length = 283
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 113/246 (45%), Positives = 161/246 (65%)
Query: 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVE 74
+PF L AG NV+ES + M++ +H ++ K+G+P VFK+SFDKANR+S S+RGPG+ E
Sbjct: 17 KPFTLFAGMNVLESRDLAMQICEHYVKVTDKLGIPYVFKASFDKANRSSVHSYRGPGLEE 76
Query: 75 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 134
G+KI +++K + + I+TDVH Q + V V D+IQ+PAFL RQTDL+ A AKTG +IN
Sbjct: 77 GMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVIN 136
Query: 135 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREAN--CPV 192
+KK QF + + N EK GN V++CERG+ GY++L+VD M++A+ P+
Sbjct: 137 VKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVDMLGFGVMKQASNGSPI 196
Query: 193 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDG 252
+ DVTHSLQ D G ASGG RE +A+ +A G+ G+F+E H +P A DG
Sbjct: 197 IFDVTHSLQMR-----DPSGAASGGRREQTVELAKAGLATGIAGLFIEAHPNPDKARCDG 251
Query: 253 PTQWPL 258
P+ PL
Sbjct: 252 PSALPL 257
>TIGR_CMR|VC_2175 [details] [associations]
symbol:VC_2175 "2-dehydro-3-deoxyphosphooctonate aldolase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0019294 eggNOG:COG2877 KO:K01627
ProtClustDB:PRK05198 UniPathway:UPA00357 GO:GO:0008676
PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362 PIR:F82108
RefSeq:NP_231806.1 ProteinModelPortal:Q9KQ29 SMR:Q9KQ29
PRIDE:Q9KQ29 DNASU:2613311 GeneID:2613311 KEGG:vch:VC2175
PATRIC:20083363 OMA:LCDRGTC Uniprot:Q9KQ29
Length = 283
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 113/246 (45%), Positives = 161/246 (65%)
Query: 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVE 74
+PF L AG NV+ES + M++ +H ++ K+G+P VFK+SFDKANR+S S+RGPG+ E
Sbjct: 17 KPFTLFAGMNVLESRDLAMQICEHYVKVTDKLGIPYVFKASFDKANRSSVHSYRGPGLEE 76
Query: 75 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 134
G+KI +++K + + I+TDVH Q + V V D+IQ+PAFL RQTDL+ A AKTG +IN
Sbjct: 77 GMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVIN 136
Query: 135 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREAN--CPV 192
+KK QF + + N EK GN V++CERG+ GY++L+VD M++A+ P+
Sbjct: 137 VKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVDMLGFGVMKQASNGSPI 196
Query: 193 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDG 252
+ DVTHSLQ D G ASGG RE +A+ +A G+ G+F+E H +P A DG
Sbjct: 197 IFDVTHSLQMR-----DPSGAASGGRREQTVELAKAGLATGIAGLFIEAHPNPDKARCDG 251
Query: 253 PTQWPL 258
P+ PL
Sbjct: 252 PSALPL 257
>TIGR_CMR|CJE_0433 [details] [associations]
symbol:CJE_0433 "3-deoxy-8-phosphooctulonate synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0009103 RefSeq:YP_178452.1
ProteinModelPortal:Q5HW83 SMR:Q5HW83 STRING:Q5HW83 GeneID:3231195
KEGG:cjr:CJE0433 PATRIC:20042566 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198
BioCyc:CJEJ195099:GJC0-438-MONOMER UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
Uniprot:Q5HW83
Length = 271
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/246 (50%), Positives = 157/246 (63%)
Query: 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78
L+AGP VIES++ I ++A+ +K+ + + FKSSFDKANRTS SFRGPG+ EGLKI
Sbjct: 6 LIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFDKANRTSINSFRGPGLEEGLKI 65
Query: 79 LEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKG 138
L+ VK + + I+TD+HE+ Q V +VAD++QIPAFLCRQTDLLVAAAKT INIKKG
Sbjct: 66 LQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAFLCRQTDLLVAAAKTKAKINIKKG 125
Query: 139 QFCASSVMVNSAEKV-----------RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE 187
QF S + S +KV A V V ERG FGY +L+VD R+L MRE
Sbjct: 126 QFLNPSDIKYSVKKVLQTRGIEDEGYEAAQRNGVFVAERGASFGYGNLVVDMRSLVIMRE 185
Query: 188 ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247
PV+ D THS+Q P GG +SGG E + +AR A AVG+DG F E H +P
Sbjct: 186 F-APVIFDATHSVQMPGA----AGG-SSGGKSEFVEPLARAAAAVGIDGFFFETHINPCE 239
Query: 248 APVDGP 253
A DGP
Sbjct: 240 ALCDGP 245
>TIGR_CMR|DET_1486 [details] [associations]
symbol:DET_1486 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:YP_182186.1 ProteinModelPortal:Q3Z6G3
SMR:Q3Z6G3 STRING:Q3Z6G3 GeneID:3229284 KEGG:det:DET1486
PATRIC:21609994 OMA:LQHIFKE BioCyc:DETH243164:GJNF-1487-MONOMER
Uniprot:Q3Z6G3
Length = 340
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 80/237 (33%), Positives = 125/237 (52%)
Query: 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78
++AGP +ESEE +R+A+ +K K+ F+ K RTS SF+G G GLKI
Sbjct: 98 IIAGPCSVESEEQTLRIARQVKEGGAKL-----FRGGAFKP-RTSPYSFQGLGKA-GLKI 150
Query: 79 LEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKG 138
LEKV+ + IVT+ ++ + V DIIQI A + LL A +T K + +K+G
Sbjct: 151 LEKVRSETGLLIVTEATDSENLKLVEASTDIIQIGARNMQNYSLLRRAGQTKKPVILKRG 210
Query: 139 QFCASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYND-LIVDPRNLEWMRE-ANCPVVAD 195
++ +AE + GN V++CERG F N +D + ++ ++ P++ D
Sbjct: 211 LSATIEELLMAAEYIIAEGNTQVILCERGIRTFSDNTRFTLDLSAILSVKALSHLPIIVD 270
Query: 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDG 252
+H+ AG++ D +IP ++R AIA G DG+ +EVH DP +A DG
Sbjct: 271 PSHA----AGRR-D----------YVIP-LSRAAIATGADGLIVEVHSDPPSALSDG 311
>TIGR_CMR|BA_2958 [details] [associations]
symbol:BA_2958 "chorismate
mutase/phospho-2-dehydro-3-deoxyheptonate aldolase" species:198094
"Bacillus anthracis str. Ames" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR002701 InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 InterPro:IPR020822 Pfam:PF00793 Pfam:PF01817
PROSITE:PS51168 SMART:SM00830 Gene3D:3.20.20.70 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009073
GO:GO:0046417 Gene3D:1.20.59.10 GO:GO:0016832 HSSP:O66496
HOGENOM:HOG000023020 TIGRFAMs:TIGR01361 OMA:LQHIFKE
RefSeq:NP_845293.1 RefSeq:YP_019601.1 RefSeq:YP_029006.1
ProteinModelPortal:Q81P59 SMR:Q81P59 DNASU:1084724
EnsemblBacteria:EBBACT00000010412 EnsemblBacteria:EBBACT00000015134
EnsemblBacteria:EBBACT00000022680 GeneID:1084724 GeneID:2819977
GeneID:2852601 KEGG:ban:BA_2958 KEGG:bar:GBAA_2958 KEGG:bat:BAS2748
KO:K13853 ProtClustDB:PRK12595 BioCyc:BANT260799:GJAJ-2811-MONOMER
BioCyc:BANT261594:GJ7F-2920-MONOMER InterPro:IPR010954
TIGRFAMs:TIGR01801 Uniprot:Q81P59
Length = 358
Score = 235 (87.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 74/240 (30%), Positives = 115/240 (47%)
Query: 20 LAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKIL 79
+ GP +ES E + ++ + +K GL L+ +F RTS F+G G VEGL+IL
Sbjct: 122 IMGPCAVESLEQVRQVGQAMKD----QGLKLMRGGAFKP--RTSPYDFQGLG-VEGLQIL 174
Query: 80 EKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQ 139
+V +D+ I++++ E D+IQ+ A + DLL A K K + +K+G
Sbjct: 175 RQVADEFDLAIISEILNPNDVEMALDYVDVIQVGARNMQNFDLLRAVGKVNKPVLLKRGL 234
Query: 140 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM----REANCPVVAD 195
+N+AE + GN +++CERG Y + ++ + +E + PVV D
Sbjct: 235 AATIDEFINAAEYIIAQGNDQIILCERGIRT-YERATRNTLDISAVPILKKETHLPVVVD 293
Query: 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQ 255
VTHS G R+L+ A+ A+A+G D V EVH DP A D Q
Sbjct: 294 VTHST----------------GRRDLLLPTAKAALAIGADAVMAEVHPDPAVALSDSAQQ 337
>TIGR_CMR|CHY_1930 [details] [associations]
symbol:CHY_1930 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
RefSeq:YP_360749.1 ProteinModelPortal:Q3AAT5 SMR:Q3AAT5
STRING:Q3AAT5 GeneID:3726500 KEGG:chy:CHY_1930 PATRIC:21276951
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 OMA:GKAVGRW
ProtClustDB:PRK08673 BioCyc:CHYD246194:GJCN-1929-MONOMER
TIGRFAMs:TIGR01361 Uniprot:Q3AAT5
Length = 267
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 75/247 (30%), Positives = 123/247 (49%)
Query: 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRG 69
++ + +P ++AGP +E EE ++ A +K + G+ ++ +F RTS +F G
Sbjct: 22 EIGSGKPV-IIAGPCAVEGEEEYLKEALFLK----EAGVQILRGGAFKP--RTSPYTFAG 74
Query: 70 PGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKT 129
G EGLKIL + + +P+VT+V + E V + ADI+QI + + LL
Sbjct: 75 LGE-EGLKILARAREITGMPVVTEVLDPRDVEIVAQYADILQIGSRNMQNFTLLKEVGLI 133
Query: 130 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREA- 188
K + +K+G + +AE + AGN V++CERG + D + +L M A
Sbjct: 134 NKPVLLKRGLAATLKEWLLAAEYIVAAGNEQVILCERGIRT-FEDYTRNTFDLAGMVAAL 192
Query: 189 ---NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 245
+ PV+AD +H+ G REL+ +A A+A G DG+ +EVH +P
Sbjct: 193 DLTHLPVIADPSHAT----------------GRRELVGRVALGALAAGADGIMVEVHPEP 236
Query: 246 LNAPVDG 252
+ A DG
Sbjct: 237 VKALSDG 243
>TIGR_CMR|CHY_1037 [details] [associations]
symbol:CHY_1037 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
ProtClustDB:CLSK742702 RefSeq:YP_359883.1 ProteinModelPortal:Q3ADA1
SMR:Q3ADA1 STRING:Q3ADA1 GeneID:3728886 KEGG:chy:CHY_1037
PATRIC:21275209 OMA:PHAGQPE BioCyc:CHYD246194:GJCN-1036-MONOMER
Uniprot:Q3ADA1
Length = 266
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 72/249 (28%), Positives = 123/249 (49%)
Query: 8 FNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSF 67
+ +L + + F + AGP +ES E + + A+ +K K G+ + ++ RT +SF
Sbjct: 15 WQELTSQKRFMIFAGPCAVESREQLEKTAQVLK----KYGINGLRGGAYKP--RTRPESF 68
Query: 68 RGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAA 127
+G G EGLKIL ++K Y + +VT+V + E+ VADI+Q+ + + LL
Sbjct: 69 QGLGE-EGLKILAEIKQKYGLIVVTEVLDEESLEKALPVADILQVGSRNMQNFSLLKKLG 127
Query: 128 KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWM 185
+ K + +K+G + + + GN +++CERG T +D + +
Sbjct: 128 RVNKPVLLKRGLAATIEEWLGAMAYIEEGGNHRIILCERGIRTFEKMTRNTLDISAVPLL 187
Query: 186 REANCP--VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243
+ CP VV D +H+ AG+ +LIP +A+ A+A G DG+ +EVH
Sbjct: 188 KRL-CPYPVVVDPSHA----AGRV------------DLIPALAKAAVAAGADGLLIEVHP 230
Query: 244 DPLNAPVDG 252
+P A DG
Sbjct: 231 EPQKALSDG 239
>TIGR_CMR|GSU_3142 [details] [associations]
symbol:GSU_3142 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR006218 InterPro:IPR006268 InterPro:IPR013785
Pfam:PF00793 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009073 GO:GO:0016832
HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:NP_954183.1 ProteinModelPortal:Q747X3
SMR:Q747X3 GeneID:2688427 KEGG:gsu:GSU3142 PATRIC:22029143
OMA:QEFLMSA BioCyc:GSUL243231:GH27-3168-MONOMER Uniprot:Q747X3
Length = 339
Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 78/257 (30%), Positives = 122/257 (47%)
Query: 2 DPST-ALFNQLKAAEP-FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKA 59
+PS A+ + + P ++AGP +E E I+ A+ +K+ +V FK
Sbjct: 80 EPSVVAITDTVVIGGPEVIVMAGPCSVEGEAMIIETARAVKAAGAQVLRGGAFKP----- 134
Query: 60 NRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQ 119
RTS SF+G EGLK+L K + +PIVT+V E V + +DI+QI A +
Sbjct: 135 -RTSPYSFQGLEE-EGLKLLAKAREETGLPIVTEVVNPETAELVSEYSDILQIGARNAQN 192
Query: 120 TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIV 177
LL + + + +K+G + SAE V GN +V++CERG T +
Sbjct: 193 FALLKKVGQLRRPVLLKRGMSMTIQEFLMSAEYVMSEGNQSVILCERGIRTFETATRNTL 252
Query: 178 DPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236
D + +++ + PV+AD +H +G + P +A A+A G DG
Sbjct: 253 DLSAIPVLKQMTHLPVIADPSHG---------------TGNYHYVAP-MALAAVAAGADG 296
Query: 237 VFMEVHDDPLNAPVDGP 253
+ +EVH DP A DGP
Sbjct: 297 LMIEVHPDPERASSDGP 313
>TIGR_CMR|GSU_3333 [details] [associations]
symbol:GSU_3333 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR006218 InterPro:IPR006268 InterPro:IPR013785
Pfam:PF00793 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009073 GO:GO:0016832
HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:NP_954373.4 ProteinModelPortal:Q747D4
GeneID:2687649 KEGG:gsu:GSU3333 PATRIC:22029519
BioCyc:GSUL243231:GH27-3252-MONOMER Uniprot:Q747D4
Length = 336
Score = 215 (80.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 71/235 (30%), Positives = 112/235 (47%)
Query: 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78
++AGP +E EE I+R A+ +K K G L+ +F RT +F+G EGLK+
Sbjct: 98 VVAGPCAVEGEEQIVRTARAVK----KYGADLLRGGAFKP--RTGPHTFQGL-REEGLKL 150
Query: 79 LEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKG 138
L + +PIVT+V V + AD++Q+ A + +LL + K + +K+G
Sbjct: 151 LAIARRETGLPIVTEVMSPDTVGLVAEYADLLQVGARNMQNFELLKELGRIRKPVLLKRG 210
Query: 139 QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTH 198
+ +AE + GN V++CERG RN + A P++ ++TH
Sbjct: 211 MSATLEEFLAAAEYILAEGNGQVILCERGI----RTFETATRNT--LDLAVVPLIREMTH 264
Query: 199 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253
P +D G R L+ +A+ A+ G GV +EVH +P A DGP
Sbjct: 265 L---PV--MVDPSHAT--GKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGP 312
>TIGR_CMR|CHY_0475 [details] [associations]
symbol:CHY_0475 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
RefSeq:YP_359333.1 ProteinModelPortal:Q3AEV1 SMR:Q3AEV1
STRING:Q3AEV1 GeneID:3726615 KEGG:chy:CHY_0475 PATRIC:21274103
OMA:GGPCTVE BioCyc:CHYD246194:GJCN-476-MONOMER Uniprot:Q3AEV1
Length = 336
Score = 213 (80.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 72/240 (30%), Positives = 120/240 (50%)
Query: 17 FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGL 76
F ++AGP +ES E + +A+ +K G+ + +F RTS SF+G G EG+
Sbjct: 94 FTIIAGPCAVESRESLKAVAQFLKD----KGIKFLRGGTFKP--RTSPYSFQGLGE-EGV 146
Query: 77 KILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIK 136
IL+++ Y + VT+V E E V + DI+Q+ A + LL ++ + +K
Sbjct: 147 IILQEIGQEYGLITVTEVLEAKDVEFVAERIDILQVGARNMQNFALLKELSQVENPVILK 206
Query: 137 KGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWMRE-ANCPVV 193
+G + +AE + GN V++CERG T +D + +++ ++ PV+
Sbjct: 207 RGLSATIEEWLLAAEYLLSGGNQKVILCERGIRTFETATRNTLDLSAVALVKQLSHLPVI 266
Query: 194 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253
D +H+ GK RELI ++R A+A+G DG+ +EVH +P A DGP
Sbjct: 267 VDPSHA----TGK------------RELILPLSRAALALGADGLMIEVHPEPEKALSDGP 310
>TIGR_CMR|CHY_1588 [details] [associations]
symbol:CHY_1588 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
RefSeq:YP_360417.1 ProteinModelPortal:Q3ABR7 SMR:Q3ABR7
STRING:Q3ABR7 GeneID:3727505 KEGG:chy:CHY_1588 PATRIC:21276301
OMA:NTGYVDD ProtClustDB:CLSK742702
BioCyc:CHYD246194:GJCN-1587-MONOMER Uniprot:Q3ABR7
Length = 270
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 71/249 (28%), Positives = 118/249 (47%)
Query: 7 LFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKS 66
++ L + F + AGP +E+ E I+ AK +K S VGL +F RT +S
Sbjct: 18 IWEDLLKSNRFLVFAGPCAVENLEQIIETAKIVKD-SGAVGLR---GGAFKP--RTRPES 71
Query: 67 FRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAA 126
F+G G E LK L K + +VT+V + + VADI+Q+ + + LL
Sbjct: 72 FQGLGE-EALKYLALAKAETGLLVVTEVIDEDSLNKALPVADILQVGSRNMQNYALLKLL 130
Query: 127 AKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEW 184
AK K + +K+G + + + GN +++CERG T +D +
Sbjct: 131 AKVDKPVLLKRGLAATLEEWLGAVAYLEKGGNRKIILCERGIRTFETMTRNTLDISAVPL 190
Query: 185 MREAN-CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243
+++ PV+ D +H+ AG+ R++IP +A+ A+A G DG+ +E+H
Sbjct: 191 LKKLTPYPVIVDPSHA----AGR------------RDIIPSLAKAAVAAGADGLLIEIHP 234
Query: 244 DPLNAPVDG 252
+P A DG
Sbjct: 235 EPERALSDG 243
>TIGR_CMR|DET_0468 [details] [associations]
symbol:DET_0468 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:YP_181212.1 ProteinModelPortal:Q3Z987
STRING:Q3Z987 GeneID:3230167 KEGG:det:DET0468 PATRIC:21608005
OMA:MAVMTEI BioCyc:DETH243164:GJNF-468-MONOMER Uniprot:Q3Z987
Length = 351
Score = 196 (74.1 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 73/253 (28%), Positives = 123/253 (48%)
Query: 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMV- 73
EP F+ AGP +ES+E +M++A+ K ++ V+K R+S SF+G G
Sbjct: 99 EPVFI-AGPCAVESKEALMKIAEGAKMAGAQILRGGVYKP------RSSVHSFQGLGSAG 151
Query: 74 -----EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAK 128
E L L++ +++ ++T++ Q + V + DI+Q+ + DLL A+
Sbjct: 152 KDEATEALSWLKEAGERFEMAVMTEIRGESQADLVAEYVDILQVGSRNMYDQDLLATVAR 211
Query: 129 TGKIINIKKGQFCAS-SVMVNSAEKVRLAGNPNVMVCERGTM-FG-------YN-DLIVD 178
GK + K+ F AS ++ AE + GN ++++CERG + G YN DL
Sbjct: 212 KGKPVMYKR-HFGASMEEFLSFAEYIAAEGNKDIILCERGIVPVGKGKNFTRYNLDLAAV 270
Query: 179 PRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 238
P L +E P++ D +H+ G R+LI ++ A+A G +G+
Sbjct: 271 PVAL---KETYLPIMVDPSHAT----------------GRRDLIYSMSCAAMAAGANGLM 311
Query: 239 MEVHDDPLNAPVD 251
+EVH +P A VD
Sbjct: 312 IEVHTNPAEALVD 324
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 290 282 0.00083 115 3 11 22 0.50 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 609 (65 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.24u 0.11s 22.35t Elapsed: 00:00:01
Total cpu time: 22.24u 0.11s 22.35t Elapsed: 00:00:01
Start: Sat May 11 00:43:13 2013 End: Sat May 11 00:43:14 2013