Query 022892
Match_columns 290
No_of_seqs 156 out of 1360
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 12:52:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sz8_A 2-dehydro-3-deoxyphosph 100.0 3.5E-78 1.2E-82 559.5 27.1 266 10-280 14-281 (285)
2 3tml_A 2-dehydro-3-deoxyphosph 100.0 2.2E-78 7.4E-83 561.9 21.8 271 10-285 11-287 (288)
3 3fs2_A 2-dehydro-3-deoxyphosph 100.0 2.7E-77 9.2E-82 555.9 23.4 261 11-276 36-296 (298)
4 2qkf_A 3-deoxy-D-manno-octulos 100.0 2.2E-74 7.7E-79 534.6 22.7 270 10-284 9-280 (280)
5 2nwr_A 2-dehydro-3-deoxyphosph 100.0 6.2E-73 2.1E-77 521.4 26.4 261 15-281 2-264 (267)
6 1o60_A 2-dehydro-3-deoxyphosph 100.0 1.9E-72 6.5E-77 524.3 24.5 263 10-277 12-276 (292)
7 1vs1_A 3-deoxy-7-phosphoheptul 100.0 1.2E-65 4.3E-70 475.0 25.2 239 11-273 34-275 (276)
8 1vr6_A Phospho-2-dehydro-3-deo 100.0 3.1E-65 1.1E-69 485.4 26.8 243 11-277 102-347 (350)
9 1zco_A 2-dehydro-3-deoxyphosph 100.0 1.2E-64 4E-69 465.5 28.0 238 11-273 20-260 (262)
10 2wqp_A Polysialic acid capsule 100.0 3.3E-65 1.1E-69 484.7 22.5 245 10-285 13-283 (349)
11 1vli_A Spore coat polysacchari 100.0 1.7E-64 5.9E-69 484.3 24.1 248 10-286 22-309 (385)
12 3nvt_A 3-deoxy-D-arabino-heptu 100.0 1.9E-63 6.5E-68 479.0 25.8 243 11-277 138-383 (385)
13 3g8r_A Probable spore coat pol 100.0 7.3E-60 2.5E-64 447.7 22.7 237 15-278 4-262 (350)
14 1n8f_A DAHP synthetase; (beta/ 100.0 3.9E-51 1.3E-55 386.6 21.7 228 11-258 48-314 (350)
15 1of8_A Phospho-2-dehydro-3-deo 100.0 1.6E-48 5.4E-53 370.1 16.4 224 11-261 63-331 (370)
16 3tqk_A Phospho-2-dehydro-3-deo 100.0 8.3E-40 2.8E-44 306.8 18.5 220 12-248 46-307 (346)
17 1aj0_A DHPS, dihydropteroate s 97.7 0.0034 1.2E-07 57.6 19.2 171 16-197 14-219 (282)
18 1eye_A DHPS 1, dihydropteroate 97.7 0.0028 9.7E-08 58.1 18.1 158 28-197 27-211 (280)
19 1h5y_A HISF; histidine biosynt 97.4 0.0038 1.3E-07 54.3 14.3 172 32-243 35-230 (253)
20 2v82_A 2-dehydro-3-deoxy-6-pho 97.4 0.02 6.9E-07 49.1 18.3 158 28-245 17-181 (212)
21 3zwt_A Dihydroorotate dehydrog 97.2 0.031 1E-06 53.0 19.7 164 85-280 144-357 (367)
22 3qja_A IGPS, indole-3-glycerol 97.2 0.045 1.5E-06 49.8 19.5 188 6-243 42-245 (272)
23 1ka9_F Imidazole glycerol phos 97.1 0.013 4.6E-07 51.4 15.2 185 31-265 32-242 (252)
24 2dqw_A Dihydropteroate synthas 97.1 0.036 1.2E-06 51.2 18.0 188 28-242 50-270 (294)
25 2vp8_A Dihydropteroate synthas 97.1 0.043 1.5E-06 51.2 18.6 170 15-197 40-251 (318)
26 2tps_A Protein (thiamin phosph 97.1 0.077 2.6E-06 45.6 19.2 196 16-271 19-223 (227)
27 1vzw_A Phosphoribosyl isomeras 97.0 0.0049 1.7E-07 54.1 11.2 170 32-243 34-225 (244)
28 1xi3_A Thiamine phosphate pyro 97.0 0.046 1.6E-06 46.5 17.0 192 16-270 16-212 (215)
29 1thf_D HISF protein; thermophI 97.0 0.012 4E-07 51.8 13.3 173 31-243 31-227 (253)
30 4e38_A Keto-hydroxyglutarate-a 97.0 0.016 5.5E-07 51.8 14.1 161 27-247 43-209 (232)
31 2y88_A Phosphoribosyl isomeras 97.0 0.0045 1.5E-07 54.2 10.4 170 32-243 33-228 (244)
32 1jub_A Dihydroorotate dehydrog 97.0 0.066 2.2E-06 48.7 18.6 177 74-282 78-303 (311)
33 3igs_A N-acetylmannosamine-6-p 97.0 0.1 3.6E-06 46.1 19.3 163 29-244 35-214 (232)
34 1y0e_A Putative N-acetylmannos 97.0 0.025 8.6E-07 48.8 15.0 163 28-243 21-207 (223)
35 2z6i_A Trans-2-enoyl-ACP reduc 96.9 0.084 2.9E-06 48.8 19.2 185 5-245 3-196 (332)
36 3tsm_A IGPS, indole-3-glycerol 96.9 0.034 1.2E-06 50.7 15.9 182 14-244 56-253 (272)
37 1tx2_A DHPS, dihydropteroate s 96.9 0.14 4.7E-06 47.3 19.9 172 15-197 38-238 (297)
38 3q58_A N-acetylmannosamine-6-p 96.9 0.061 2.1E-06 47.6 16.8 162 29-244 35-214 (229)
39 2w6r_A Imidazole glycerol phos 96.8 0.043 1.5E-06 48.6 15.7 172 32-243 32-232 (266)
40 2yci_X 5-methyltetrahydrofolat 96.8 0.13 4.4E-06 46.7 19.2 216 14-277 7-257 (271)
41 1qop_A Tryptophan synthase alp 96.8 0.28 9.5E-06 44.0 22.1 211 1-244 1-238 (268)
42 3bo9_A Putative nitroalkan dio 96.7 0.24 8.3E-06 45.7 20.3 187 3-244 15-209 (326)
43 3qja_A IGPS, indole-3-glycerol 96.7 0.012 4.2E-07 53.5 10.9 86 73-163 148-241 (272)
44 1wa3_A 2-keto-3-deoxy-6-phosph 96.6 0.021 7.2E-07 48.7 11.6 155 36-244 24-182 (205)
45 2gjl_A Hypothetical protein PA 96.6 0.4 1.4E-05 44.0 20.6 114 98-244 87-205 (328)
46 1pii_A N-(5'phosphoribosyl)ant 96.6 0.044 1.5E-06 53.4 14.6 151 73-267 143-302 (452)
47 3vkj_A Isopentenyl-diphosphate 96.5 0.056 1.9E-06 51.2 14.9 227 2-280 48-333 (368)
48 4ef8_A Dihydroorotate dehydrog 96.5 0.018 6.1E-07 54.4 11.4 229 10-279 43-335 (354)
49 3tr9_A Dihydropteroate synthas 96.5 0.072 2.5E-06 49.6 15.2 158 28-196 47-235 (314)
50 3i65_A Dihydroorotate dehydrog 96.5 0.052 1.8E-06 52.4 14.5 231 10-282 90-406 (415)
51 2vef_A Dihydropteroate synthas 96.5 0.086 3E-06 49.0 15.5 160 28-198 31-236 (314)
52 1f6y_A 5-methyltetrahydrofolat 96.4 0.4 1.4E-05 43.2 19.2 185 28-242 23-231 (262)
53 2ekc_A AQ_1548, tryptophan syn 96.4 0.28 9.7E-06 43.9 18.1 230 1-270 1-258 (262)
54 3tdn_A FLR symmetric alpha-bet 96.4 0.0044 1.5E-07 54.8 6.0 84 32-128 37-123 (247)
55 1vc4_A Indole-3-glycerol phosp 96.4 0.086 2.9E-06 47.3 14.5 185 6-243 36-239 (254)
56 4hb7_A Dihydropteroate synthas 96.3 0.58 2E-05 42.6 19.6 158 28-197 28-204 (270)
57 2y5s_A DHPS, dihydropteroate s 96.3 0.38 1.3E-05 44.2 18.7 189 28-242 44-272 (294)
58 2h9a_B CO dehydrogenase/acetyl 96.3 0.19 6.6E-06 46.5 16.6 171 14-197 44-247 (310)
59 3o63_A Probable thiamine-phosp 96.2 0.15 5.1E-06 45.5 15.3 181 15-243 30-222 (243)
60 1rd5_A Tryptophan synthase alp 96.2 0.6 2.1E-05 41.3 20.2 183 28-243 30-233 (262)
61 3nav_A Tryptophan synthase alp 96.2 0.7 2.4E-05 41.9 20.1 208 2-243 5-240 (271)
62 1qo2_A Molecule: N-((5-phospho 96.2 0.012 4.1E-07 51.6 7.7 183 32-264 32-239 (241)
63 2e6f_A Dihydroorotate dehydrog 96.1 0.14 4.7E-06 46.6 14.6 128 121-280 150-303 (314)
64 4djd_D C/Fe-SP, corrinoid/iron 96.1 0.14 4.7E-06 47.8 14.6 171 14-195 51-252 (323)
65 3vnd_A TSA, tryptophan synthas 96.0 0.46 1.6E-05 43.0 17.6 207 5-243 6-238 (267)
66 3q58_A N-acetylmannosamine-6-p 96.0 0.073 2.5E-06 47.0 11.8 109 34-163 92-209 (229)
67 3tsm_A IGPS, indole-3-glycerol 96.0 0.048 1.6E-06 49.7 10.8 86 73-163 155-248 (272)
68 3igs_A N-acetylmannosamine-6-p 95.9 0.078 2.7E-06 46.9 11.8 109 34-163 92-209 (232)
69 2ftp_A Hydroxymethylglutaryl-C 95.9 0.12 4.2E-06 47.2 13.2 182 28-244 28-237 (302)
70 3k13_A 5-methyltetrahydrofolat 95.8 0.28 9.7E-06 45.2 15.5 201 10-239 5-253 (300)
71 1nvm_A HOA, 4-hydroxy-2-oxoval 95.8 0.38 1.3E-05 44.8 16.6 186 28-244 28-228 (345)
72 3eoo_A Methylisocitrate lyase; 95.8 0.13 4.5E-06 47.4 13.1 139 77-275 12-151 (298)
73 3khj_A Inosine-5-monophosphate 95.6 0.3 1E-05 46.0 15.2 193 2-245 33-241 (361)
74 1to3_A Putative aldolase YIHT; 95.6 0.089 3E-06 48.5 11.2 118 42-168 116-257 (304)
75 4a29_A Engineered retro-aldol 95.6 0.15 5.3E-06 46.1 12.3 82 73-159 139-228 (258)
76 1ydn_A Hydroxymethylglutaryl-C 95.6 0.15 5E-06 46.3 12.4 182 28-244 24-233 (295)
77 1ydo_A HMG-COA lyase; TIM-barr 95.6 0.18 6.3E-06 46.3 13.1 181 28-244 26-235 (307)
78 3bw2_A 2-nitropropane dioxygen 95.5 0.24 8.1E-06 46.4 14.1 141 73-244 83-241 (369)
79 2cw6_A Hydroxymethylglutaryl-C 95.5 0.17 5.6E-06 46.2 12.7 179 28-243 25-233 (298)
80 1vhc_A Putative KHG/KDPG aldol 95.4 0.19 6.6E-06 44.2 12.2 130 28-194 27-162 (224)
81 4adt_A Pyridoxine biosynthetic 95.4 0.071 2.4E-06 49.2 9.7 171 41-244 35-242 (297)
82 2yw3_A 4-hydroxy-2-oxoglutarat 95.3 0.78 2.7E-05 39.6 15.6 170 30-270 25-199 (207)
83 4fxs_A Inosine-5'-monophosphat 95.3 0.13 4.4E-06 50.5 11.7 119 13-151 216-354 (496)
84 2qjg_A Putative aldolase MJ040 95.2 0.21 7.1E-06 44.4 11.8 111 44-163 109-236 (273)
85 1mxs_A KDPG aldolase; 2-keto-3 95.1 0.27 9.4E-06 43.2 12.0 130 28-194 36-171 (225)
86 1yxy_A Putative N-acetylmannos 95.0 1.5 5.1E-05 37.7 17.0 159 31-243 37-218 (234)
87 3ceu_A Thiamine phosphate pyro 95.0 0.31 1.1E-05 41.9 12.0 193 16-275 2-201 (210)
88 3nl6_A Thiamine biosynthetic b 94.9 0.72 2.5E-05 45.8 16.0 157 10-194 5-178 (540)
89 3fa4_A 2,3-dimethylmalate lyas 94.8 0.51 1.8E-05 43.6 13.7 145 76-277 6-153 (302)
90 3ffs_A Inosine-5-monophosphate 94.8 0.24 8.2E-06 47.5 11.9 109 33-162 146-273 (400)
91 1wbh_A KHG/KDPG aldolase; lyas 94.8 0.61 2.1E-05 40.6 13.5 147 7-194 9-161 (214)
92 4avf_A Inosine-5'-monophosphat 94.8 0.24 8.3E-06 48.4 12.1 118 14-151 215-352 (490)
93 1tv5_A Dhodehase, dihydroorota 94.7 2.3 7.7E-05 41.2 18.5 120 129-280 295-432 (443)
94 3oix_A Putative dihydroorotate 94.7 0.29 9.8E-06 45.9 11.7 229 10-282 44-336 (345)
95 1z41_A YQJM, probable NADH-dep 94.6 2 6.7E-05 39.7 17.2 101 121-243 199-310 (338)
96 1geq_A Tryptophan synthase alp 94.6 0.97 3.3E-05 39.3 14.3 213 18-271 6-244 (248)
97 3b8i_A PA4872 oxaloacetate dec 94.5 0.53 1.8E-05 43.1 12.9 137 76-274 10-148 (287)
98 4fo4_A Inosine 5'-monophosphat 94.5 0.57 1.9E-05 44.3 13.4 143 73-245 82-245 (366)
99 3lab_A Putative KDPG (2-keto-3 94.5 0.89 3.1E-05 40.0 13.8 129 28-193 23-163 (217)
100 3sgz_A Hydroxyacid oxidase 2; 94.5 0.94 3.2E-05 42.6 14.8 179 74-283 86-342 (352)
101 4fo4_A Inosine 5'-monophosphat 94.5 0.4 1.4E-05 45.3 12.3 131 8-162 88-238 (366)
102 3khj_A Inosine-5-monophosphate 94.4 0.36 1.2E-05 45.4 11.9 102 33-151 107-227 (361)
103 3b0p_A TRNA-dihydrouridine syn 94.4 1.7 5.8E-05 40.4 16.5 141 74-243 70-228 (350)
104 1jcn_A Inosine monophosphate d 94.4 0.31 1.1E-05 47.6 11.9 117 15-151 242-378 (514)
105 3glc_A Aldolase LSRF; TIM barr 94.4 0.37 1.3E-05 44.3 11.7 105 44-159 135-252 (295)
106 1vhn_A Putative flavin oxidore 94.4 0.14 4.8E-06 47.0 8.9 111 113-248 104-221 (318)
107 3ble_A Citramalate synthase fr 94.4 0.73 2.5E-05 42.8 13.8 176 28-244 39-247 (337)
108 3noy_A 4-hydroxy-3-methylbut-2 94.4 0.3 1E-05 46.2 11.0 163 11-198 26-213 (366)
109 1yad_A Regulatory protein TENI 94.3 2.2 7.6E-05 36.4 16.1 112 98-244 79-196 (221)
110 3lye_A Oxaloacetate acetyl hyd 94.3 1.1 3.6E-05 41.5 14.4 146 75-276 12-160 (307)
111 2fli_A Ribulose-phosphate 3-ep 94.2 0.86 2.9E-05 38.8 12.9 175 28-244 14-202 (220)
112 3f4w_A Putative hexulose 6 pho 94.1 0.57 1.9E-05 39.7 11.5 168 28-244 11-191 (211)
113 1xg4_A Probable methylisocitra 94.1 0.85 2.9E-05 41.9 13.2 111 77-245 7-119 (295)
114 3iv3_A Tagatose 1,6-diphosphat 94.0 0.94 3.2E-05 42.3 13.6 122 42-168 118-283 (332)
115 1rpx_A Protein (ribulose-phosp 93.9 0.96 3.3E-05 39.0 12.8 187 15-244 9-211 (230)
116 2zbt_A Pyridoxal biosynthesis 93.9 0.058 2E-06 48.9 5.0 173 33-244 31-242 (297)
117 1p0k_A Isopentenyl-diphosphate 93.8 4 0.00014 37.6 18.0 133 120-280 167-318 (349)
118 1q7z_A 5-methyltetrahydrofolat 93.7 2.9 0.0001 41.6 17.3 193 15-243 313-539 (566)
119 3ih1_A Methylisocitrate lyase; 93.6 1.1 3.8E-05 41.3 13.2 139 74-274 16-156 (305)
120 1vc4_A Indole-3-glycerol phosp 93.6 0.26 8.9E-06 44.1 8.6 75 74-149 141-226 (254)
121 4djd_C C/Fe-SP, corrinoid/iron 93.5 0.95 3.2E-05 44.0 13.0 175 5-198 79-270 (446)
122 1zlp_A PSR132, petal death pro 93.5 1.3 4.5E-05 41.1 13.6 110 78-244 30-140 (318)
123 1w8s_A FBP aldolase, fructose- 93.5 0.83 2.8E-05 40.9 11.9 84 74-159 125-226 (263)
124 2ze3_A DFA0005; organic waste 93.5 1.3 4.4E-05 40.2 13.2 135 78-277 9-144 (275)
125 3sr7_A Isopentenyl-diphosphate 93.4 0.39 1.3E-05 45.4 10.0 135 121-283 196-348 (365)
126 4fb5_A Probable oxidoreductase 93.4 0.21 7.3E-06 45.7 8.1 74 79-157 70-145 (393)
127 1i4n_A Indole-3-glycerol phosp 93.4 0.25 8.5E-06 44.4 8.2 77 74-151 137-222 (251)
128 3vzx_A Heptaprenylglyceryl pho 93.3 2.1 7.1E-05 37.9 14.0 170 44-269 28-226 (228)
129 2h9a_A Carbon monoxide dehydro 93.3 1.6 5.6E-05 42.3 14.4 188 14-242 89-294 (445)
130 3hg3_A Alpha-galactosidase A; 93.3 0.42 1.4E-05 45.9 10.1 111 28-138 34-172 (404)
131 1i4n_A Indole-3-glycerol phosp 93.3 1.6 5.5E-05 39.1 13.4 189 5-244 29-234 (251)
132 3r2g_A Inosine 5'-monophosphat 93.2 1.1 3.6E-05 42.4 12.5 104 31-151 100-219 (361)
133 1gte_A Dihydropyrimidine dehyd 93.1 3.5 0.00012 43.7 17.7 173 74-280 620-846 (1025)
134 1p4c_A L(+)-mandelate dehydrog 93.0 0.68 2.3E-05 43.7 11.1 130 119-280 213-345 (380)
135 4h3v_A Oxidoreductase domain p 93.0 0.27 9.3E-06 45.0 8.1 71 77-152 49-121 (390)
136 4had_A Probable oxidoreductase 92.9 0.22 7.6E-06 45.5 7.4 76 77-157 60-137 (350)
137 1eep_A Inosine 5'-monophosphat 92.7 1.2 4.1E-05 42.1 12.3 115 17-151 142-276 (404)
138 1f76_A Dihydroorotate dehydrog 92.7 0.56 1.9E-05 43.1 9.7 90 130-242 211-320 (336)
139 1h1y_A D-ribulose-5-phosphate 92.6 2.9 0.0001 36.0 13.9 185 18-243 8-204 (228)
140 1vcf_A Isopentenyl-diphosphate 92.4 1.1 3.8E-05 41.1 11.4 136 120-284 171-326 (332)
141 1gox_A (S)-2-hydroxy-acid oxid 92.3 7.2 0.00025 36.4 18.6 131 119-280 213-347 (370)
142 3usb_A Inosine-5'-monophosphat 92.3 1.2 4.2E-05 43.6 12.2 118 14-151 242-379 (511)
143 3ewb_X 2-isopropylmalate synth 92.3 6.3 0.00022 35.7 16.3 175 28-243 25-230 (293)
144 3ffs_A Inosine-5-monophosphate 92.3 2.6 8.8E-05 40.3 14.0 129 88-245 137-280 (400)
145 2hjp_A Phosphonopyruvate hydro 92.3 1.9 6.6E-05 39.3 12.7 109 77-244 5-114 (290)
146 3jr2_A Hexulose-6-phosphate sy 92.2 0.94 3.2E-05 39.0 10.0 178 17-243 8-197 (218)
147 2nli_A Lactate oxidase; flavoe 92.1 0.98 3.3E-05 42.5 10.7 130 120-280 218-351 (368)
148 1vrd_A Inosine-5'-monophosphat 92.1 1.7 5.8E-05 42.0 12.8 116 16-151 225-360 (494)
149 3uuw_A Putative oxidoreductase 92.0 0.58 2E-05 42.0 8.8 74 78-157 44-117 (308)
150 3ivs_A Homocitrate synthase, m 91.9 7.2 0.00025 37.5 16.8 174 28-243 59-256 (423)
151 2uva_G Fatty acid synthase bet 91.8 3.2 0.00011 47.4 16.2 193 4-244 573-799 (2060)
152 4gqa_A NAD binding oxidoreduct 91.8 0.49 1.7E-05 44.3 8.4 76 77-157 70-147 (412)
153 1wv2_A Thiazole moeity, thiazo 91.8 2.7 9.2E-05 38.1 12.7 135 5-151 63-207 (265)
154 1hg3_A Triosephosphate isomera 91.6 6.6 0.00023 34.5 16.4 178 30-269 22-222 (225)
155 3mcm_A 2-amino-4-hydroxy-6-hyd 91.6 3.1 0.00011 40.3 13.8 157 28-195 210-399 (442)
156 3ohs_X Trans-1,2-dihydrobenzen 91.5 0.73 2.5E-05 41.9 9.0 76 77-157 40-117 (334)
157 3rc1_A Sugar 3-ketoreductase; 91.4 0.71 2.4E-05 42.5 8.8 74 78-157 65-140 (350)
158 3fok_A Uncharacterized protein 91.2 0.57 1.9E-05 43.4 7.8 111 46-168 140-276 (307)
159 1kbi_A Cytochrome B2, L-LCR; f 91.1 1 3.5E-05 44.3 10.1 129 120-280 332-470 (511)
160 2c6q_A GMP reductase 2; TIM ba 91.1 0.71 2.4E-05 43.2 8.5 96 121-244 150-256 (351)
161 3dty_A Oxidoreductase, GFO/IDH 91.0 0.76 2.6E-05 43.0 8.8 77 78-157 53-136 (398)
162 2qiw_A PEP phosphonomutase; st 90.9 1.9 6.3E-05 38.7 10.8 68 77-156 10-78 (255)
163 3hl2_A O-phosphoseryl-tRNA(SEC 90.9 0.82 2.8E-05 45.0 9.1 105 119-243 172-284 (501)
164 3oqb_A Oxidoreductase; structu 90.9 0.94 3.2E-05 41.9 9.2 75 78-157 58-134 (383)
165 2bmb_A Folic acid synthesis pr 90.9 14 0.00047 36.7 19.2 112 15-136 223-362 (545)
166 2nv1_A Pyridoxal biosynthesis 90.8 0.86 2.9E-05 41.4 8.7 172 33-243 31-241 (305)
167 2qr6_A IMP dehydrogenase/GMP r 90.8 1.5 5E-05 41.3 10.5 134 79-243 147-309 (393)
168 3eeg_A 2-isopropylmalate synth 90.7 3.4 0.00012 38.1 12.8 100 121-244 126-232 (325)
169 3v5n_A Oxidoreductase; structu 90.7 0.88 3E-05 43.0 8.9 74 78-157 78-161 (417)
170 2h6r_A Triosephosphate isomera 90.7 7.6 0.00026 33.5 14.9 163 30-243 16-202 (219)
171 2nzl_A Hydroxyacid oxidase 1; 90.3 1.3 4.4E-05 42.1 9.7 133 119-282 240-376 (392)
172 1ypf_A GMP reductase; GUAC, pu 90.3 8 0.00027 35.5 15.0 174 83-285 90-319 (336)
173 3moi_A Probable dehydrogenase; 90.3 1.2 3.9E-05 41.6 9.3 73 79-157 41-115 (387)
174 2nx9_A Oxaloacetate decarboxyl 90.2 5.7 0.00019 38.6 14.3 115 106-244 113-235 (464)
175 1zh8_A Oxidoreductase; TM0312, 90.2 0.9 3.1E-05 41.6 8.3 75 78-157 57-133 (340)
176 1zfj_A Inosine monophosphate d 90.1 3.9 0.00013 39.3 13.2 103 32-151 234-356 (491)
177 3ajx_A 3-hexulose-6-phosphate 90.0 7.6 0.00026 32.4 14.7 169 28-244 11-190 (207)
178 3eb2_A Putative dihydrodipicol 89.9 3.8 0.00013 37.2 12.2 65 14-92 71-135 (300)
179 3f4w_A Putative hexulose 6 pho 89.9 2.7 9.1E-05 35.4 10.5 104 40-163 70-186 (211)
180 3qtg_A Pyruvate kinase, PK; TI 89.7 1 3.6E-05 43.9 8.6 126 42-187 191-340 (461)
181 1ep3_A Dihydroorotate dehydrog 89.7 1.6 5.4E-05 39.2 9.4 158 86-278 96-297 (311)
182 3ip3_A Oxidoreductase, putativ 89.7 0.86 2.9E-05 41.5 7.7 79 76-158 39-119 (337)
183 3rzi_A Probable 3-deoxy-D-arab 89.7 1.2 4.1E-05 43.1 8.8 89 107-200 276-371 (462)
184 1pii_A N-(5'phosphoribosyl)ant 89.5 6.4 0.00022 38.2 14.1 188 5-244 37-240 (452)
185 1wa3_A 2-keto-3-deoxy-6-phosph 89.5 1.2 4.1E-05 37.5 8.0 80 78-163 95-177 (205)
186 1s2w_A Phosphoenolpyruvate pho 89.4 0.82 2.8E-05 41.9 7.3 109 77-244 9-118 (295)
187 4drs_A Pyruvate kinase; glycol 89.4 0.86 3E-05 45.2 7.9 121 39-174 221-372 (526)
188 3tn4_A Phosphotriesterase; lac 89.4 7.3 0.00025 36.5 14.0 144 28-195 77-263 (360)
189 3otr_A Enolase; structural gen 89.3 1.3 4.6E-05 43.0 9.0 95 73-168 284-386 (452)
190 4hkt_A Inositol 2-dehydrogenas 89.3 1.5 5E-05 39.7 8.9 72 79-157 41-114 (331)
191 3tak_A DHDPS, dihydrodipicolin 89.2 3.4 0.00012 37.3 11.3 93 14-120 68-170 (291)
192 3t05_A Pyruvate kinase, PK; te 89.2 1.4 4.8E-05 44.4 9.3 119 41-174 200-342 (606)
193 3e9m_A Oxidoreductase, GFO/IDH 89.2 1.8 6.2E-05 39.3 9.5 74 79-157 43-118 (330)
194 3rmj_A 2-isopropylmalate synth 89.2 11 0.00039 35.3 15.2 176 28-244 32-238 (370)
195 1rqb_A Transcarboxylase 5S sub 89.1 8 0.00027 38.3 14.6 116 106-245 130-255 (539)
196 1tlt_A Putative oxidoreductase 89.1 1.4 4.6E-05 39.7 8.5 71 81-157 46-116 (319)
197 1tqj_A Ribulose-phosphate 3-ep 89.1 3.5 0.00012 35.9 10.9 166 41-243 24-204 (230)
198 3db2_A Putative NADPH-dependen 89.1 1.5 5.3E-05 40.0 9.0 74 78-157 42-117 (354)
199 3ovp_A Ribulose-phosphate 3-ep 89.0 11 0.00037 32.8 14.4 139 74-243 52-200 (228)
200 1xm3_A Thiazole biosynthesis p 89.0 7.4 0.00025 34.6 13.2 116 121-275 114-234 (264)
201 3d0c_A Dihydrodipicolinate syn 89.0 2.3 7.8E-05 39.0 10.0 92 14-121 79-177 (314)
202 1ujp_A Tryptophan synthase alp 88.7 13 0.00044 33.3 18.1 217 7-271 6-252 (271)
203 3s5o_A 4-hydroxy-2-oxoglutarat 88.7 3.8 0.00013 37.4 11.2 66 14-92 81-147 (307)
204 3q2i_A Dehydrogenase; rossmann 88.6 1.1 3.7E-05 41.1 7.6 73 79-157 52-126 (354)
205 3u3x_A Oxidoreductase; structu 88.4 1.6 5.3E-05 40.4 8.6 75 78-157 63-139 (361)
206 3qfe_A Putative dihydrodipicol 88.4 10 0.00036 34.6 14.1 64 14-91 78-143 (318)
207 3mz0_A Inositol 2-dehydrogenas 88.3 1.8 6.1E-05 39.4 8.8 77 78-158 40-118 (344)
208 3dz1_A Dihydrodipicolinate syn 88.2 14 0.00048 33.6 14.9 62 15-92 75-139 (313)
209 4gj1_A 1-(5-phosphoribosyl)-5- 88.2 4.1 0.00014 35.8 10.8 185 32-265 33-241 (243)
210 1viz_A PCRB protein homolog; s 88.1 6.5 0.00022 34.8 12.1 162 33-243 23-213 (240)
211 1f6k_A N-acetylneuraminate lya 88.1 6 0.00021 35.7 12.2 64 14-92 71-135 (293)
212 4avf_A Inosine-5'-monophosphat 88.1 0.9 3.1E-05 44.3 7.0 118 98-245 232-366 (490)
213 1jvn_A Glutamine, bifunctional 88.1 4.1 0.00014 40.3 11.8 188 31-265 281-543 (555)
214 3eol_A Isocitrate lyase; seatt 88.0 7.1 0.00024 37.7 13.0 167 74-277 48-219 (433)
215 4fxs_A Inosine-5'-monophosphat 88.0 1.7 6E-05 42.4 9.0 116 99-244 235-367 (496)
216 3gr4_A Pyruvate kinase isozyme 88.0 1.6 5.5E-05 43.5 8.7 109 40-163 248-380 (550)
217 3sgz_A Hydroxyacid oxidase 2; 87.9 7.8 0.00027 36.3 13.1 100 121-243 90-248 (352)
218 3w01_A Heptaprenylglyceryl pho 87.9 14 0.00048 32.7 14.1 169 44-269 33-232 (235)
219 2gjl_A Hypothetical protein PA 87.8 4.6 0.00016 36.7 11.3 72 79-151 110-192 (328)
220 3ezy_A Dehydrogenase; structur 87.8 2.7 9.1E-05 38.2 9.7 75 78-157 39-115 (344)
221 3flu_A DHDPS, dihydrodipicolin 87.7 3.4 0.00012 37.5 10.2 92 14-120 74-176 (297)
222 3vk5_A MOEO5; TIM barrel, tran 87.7 6.5 0.00022 35.9 12.0 178 17-243 41-259 (286)
223 3qtp_A Enolase 1; glycolysis, 87.7 3.9 0.00013 39.6 11.0 94 73-167 282-382 (441)
224 1ypf_A GMP reductase; GUAC, pu 87.6 4.6 0.00016 37.2 11.2 104 31-151 106-230 (336)
225 3sr7_A Isopentenyl-diphosphate 87.6 4 0.00014 38.4 10.9 77 74-151 193-298 (365)
226 3eeg_A 2-isopropylmalate synth 87.5 7.8 0.00027 35.7 12.7 105 142-271 79-192 (325)
227 4gmf_A Yersiniabactin biosynth 87.4 1.4 4.9E-05 41.3 7.8 73 77-157 43-119 (372)
228 1w0m_A TIM, triosephosphate is 87.4 14 0.00049 32.3 16.4 179 30-270 19-220 (226)
229 2vc6_A MOSA, dihydrodipicolina 87.4 3 0.0001 37.7 9.6 93 14-121 67-171 (292)
230 3daq_A DHDPS, dihydrodipicolin 87.2 9.1 0.00031 34.5 12.8 64 14-92 69-133 (292)
231 3euw_A MYO-inositol dehydrogen 87.0 2.1 7.1E-05 38.9 8.4 70 79-154 42-113 (344)
232 3hqn_D Pyruvate kinase, PK; TI 87.0 2.6 8.9E-05 41.5 9.5 109 40-163 198-330 (499)
233 2wkj_A N-acetylneuraminate lya 87.0 7.5 0.00026 35.3 12.2 64 14-92 78-143 (303)
234 3ec7_A Putative dehydrogenase; 86.9 2.5 8.6E-05 38.9 9.0 76 79-158 62-139 (357)
235 2rfg_A Dihydrodipicolinate syn 86.8 3.6 0.00012 37.3 9.8 93 14-121 67-170 (297)
236 2z6i_A Trans-2-enoyl-ACP reduc 86.8 4.3 0.00015 37.1 10.5 67 84-151 107-182 (332)
237 3khd_A Pyruvate kinase; malari 86.7 1.7 5.7E-05 43.0 8.0 108 41-163 224-355 (520)
238 1yxy_A Putative N-acetylmannos 86.7 6.3 0.00022 33.7 11.0 71 87-162 133-213 (234)
239 3e96_A Dihydrodipicolinate syn 86.6 4.3 0.00015 37.2 10.3 90 14-119 79-175 (316)
240 2ehh_A DHDPS, dihydrodipicolin 86.6 5.3 0.00018 36.1 10.8 92 14-120 67-170 (294)
241 3oa3_A Aldolase; structural ge 86.6 14 0.00048 33.7 13.6 79 131-235 176-258 (288)
242 3e18_A Oxidoreductase; dehydro 86.6 2 6.9E-05 39.5 8.2 69 83-157 46-116 (359)
243 3bo9_A Putative nitroalkan dio 86.5 4.9 0.00017 36.8 10.7 70 81-151 118-196 (326)
244 2yxg_A DHDPS, dihydrodipicolin 86.4 6.5 0.00022 35.3 11.3 93 14-121 67-171 (289)
245 3i23_A Oxidoreductase, GFO/IDH 86.3 1.4 4.8E-05 40.4 6.9 54 103-156 61-115 (349)
246 2nvw_A Galactose/lactose metab 86.3 2.2 7.6E-05 41.2 8.6 74 78-157 81-165 (479)
247 2e28_A Pyruvate kinase, PK; al 86.3 1.9 6.4E-05 43.3 8.2 118 42-174 181-323 (587)
248 2r14_A Morphinone reductase; H 86.3 22 0.00075 33.3 17.8 77 142-243 253-331 (377)
249 3qze_A DHDPS, dihydrodipicolin 86.1 4.6 0.00016 37.0 10.2 64 14-92 90-154 (314)
250 3cpr_A Dihydrodipicolinate syn 85.9 8.6 0.00029 34.9 11.9 92 14-120 83-185 (304)
251 3evn_A Oxidoreductase, GFO/IDH 85.9 1.9 6.5E-05 39.0 7.5 70 83-157 47-118 (329)
252 1xky_A Dihydrodipicolinate syn 85.8 4.9 0.00017 36.5 10.3 64 14-92 79-143 (301)
253 1ub3_A Aldolase protein; schif 85.8 13 0.00043 32.5 12.4 161 33-237 18-204 (220)
254 1xea_A Oxidoreductase, GFO/IDH 85.8 2.7 9.3E-05 37.8 8.5 75 79-157 40-114 (323)
255 3m5v_A DHDPS, dihydrodipicolin 85.7 13 0.00044 33.6 13.0 62 16-91 77-138 (301)
256 3dxi_A Putative aldolase; TIM 85.7 3.7 0.00012 38.0 9.4 181 28-244 22-220 (320)
257 2f6u_A GGGPS, (S)-3-O-geranylg 85.6 2.4 8.1E-05 37.6 7.7 66 33-117 23-88 (234)
258 2p2s_A Putative oxidoreductase 85.5 1.7 5.8E-05 39.4 6.9 59 99-157 57-117 (336)
259 3bg3_A Pyruvate carboxylase, m 85.4 20 0.00069 36.7 15.5 79 142-244 259-339 (718)
260 2qjg_A Putative aldolase MJ040 85.4 14 0.00048 32.2 12.8 121 97-243 102-240 (273)
261 3na8_A Putative dihydrodipicol 85.4 4.9 0.00017 36.8 10.0 65 14-92 91-155 (315)
262 3si9_A DHDPS, dihydrodipicolin 85.4 5.4 0.00019 36.5 10.4 93 14-121 89-193 (315)
263 3ngj_A Deoxyribose-phosphate a 85.3 5.3 0.00018 35.5 9.9 80 130-235 144-224 (239)
264 3rmj_A 2-isopropylmalate synth 85.2 4.7 0.00016 37.9 10.0 105 142-271 85-198 (370)
265 2v9d_A YAGE; dihydrodipicolini 85.0 17 0.00058 33.6 13.7 64 14-92 98-162 (343)
266 1jcn_A Inosine monophosphate d 84.9 21 0.00073 34.4 14.9 111 106-245 267-392 (514)
267 2ho3_A Oxidoreductase, GFO/IDH 84.8 3.6 0.00012 37.0 8.8 74 79-157 39-113 (325)
268 2p10_A MLL9387 protein; putati 84.7 5.5 0.00019 36.4 9.8 86 16-113 94-190 (286)
269 1o5k_A DHDPS, dihydrodipicolin 84.7 16 0.00055 33.1 13.2 92 14-120 79-182 (306)
270 3pnz_A Phosphotriesterase fami 84.6 11 0.00038 34.6 12.2 62 124-195 175-238 (330)
271 1o66_A 3-methyl-2-oxobutanoate 84.5 23 0.00079 32.0 14.3 152 77-241 7-182 (275)
272 1e0t_A Pyruvate kinase, PK; ph 84.4 6.3 0.00022 38.4 10.7 124 43-186 181-329 (470)
273 2r8w_A AGR_C_1641P; APC7498, d 84.3 20 0.00069 32.9 13.8 88 14-116 101-199 (332)
274 3hgj_A Chromate reductase; TIM 84.3 9.5 0.00033 35.2 11.6 92 130-243 219-321 (349)
275 3gg8_A Pyruvate kinase; malari 84.3 1.7 5.9E-05 42.8 6.8 119 41-174 215-357 (511)
276 2yzr_A Pyridoxal biosynthesis 84.0 3.6 0.00012 38.4 8.4 93 41-138 31-149 (330)
277 3gr7_A NADPH dehydrogenase; fl 83.9 12 0.00042 34.5 12.1 100 122-243 200-310 (340)
278 2ixa_A Alpha-N-acetylgalactosa 83.9 4.9 0.00017 38.1 9.6 84 74-158 56-143 (444)
279 3tjx_A Dihydroorotate dehydrog 83.9 13 0.00045 34.1 12.4 138 10-157 43-220 (354)
280 3l21_A DHDPS, dihydrodipicolin 83.7 5.4 0.00019 36.3 9.5 64 14-92 82-146 (304)
281 3ctl_A D-allulose-6-phosphate 83.5 14 0.00048 32.3 11.8 167 33-243 13-199 (231)
282 1ydw_A AX110P-like protein; st 83.3 2.8 9.4E-05 38.4 7.4 77 79-157 44-122 (362)
283 2glx_A 1,5-anhydro-D-fructose 83.2 5.4 0.00019 35.7 9.3 74 79-157 38-113 (332)
284 3r12_A Deoxyribose-phosphate a 83.2 19 0.00066 32.3 12.7 80 130-235 160-240 (260)
285 1vyr_A Pentaerythritol tetrani 83.2 29 0.001 32.2 17.1 76 142-243 249-326 (364)
286 3o9z_A Lipopolysaccaride biosy 83.1 2.5 8.6E-05 38.3 7.0 52 106-157 72-123 (312)
287 1y0e_A Putative N-acetylmannos 83.1 3.3 0.00011 35.1 7.4 74 77-151 107-195 (223)
288 3oa2_A WBPB; oxidoreductase, s 82.6 2.5 8.6E-05 38.4 6.8 53 105-157 72-124 (318)
289 3bw2_A 2-nitropropane dioxygen 82.4 12 0.0004 34.7 11.5 67 84-151 142-228 (369)
290 3cea_A MYO-inositol 2-dehydrog 82.4 6.3 0.00022 35.5 9.4 73 79-156 47-121 (346)
291 3btv_A Galactose/lactose metab 82.4 2.6 8.9E-05 40.0 7.1 72 79-156 63-145 (438)
292 3fhl_A Putative oxidoreductase 82.4 2.6 8.9E-05 38.7 6.8 56 102-157 60-116 (362)
293 1h6d_A Precursor form of gluco 82.3 2.9 9.8E-05 39.7 7.3 77 79-156 122-200 (433)
294 3vav_A 3-methyl-2-oxobutanoate 82.2 29 0.00098 31.4 14.3 155 76-243 18-196 (275)
295 3gdo_A Uncharacterized oxidore 82.1 2.9 9.8E-05 38.4 7.0 56 102-157 60-116 (358)
296 1lc0_A Biliverdin reductase A; 82.1 4.2 0.00014 36.4 8.0 60 99-158 56-117 (294)
297 2htm_A Thiazole biosynthesis p 82.0 22 0.00075 32.1 12.6 130 5-151 55-198 (268)
298 3cwo_X Beta/alpha-barrel prote 81.5 6.1 0.00021 32.7 8.4 84 150-265 136-220 (237)
299 3b4u_A Dihydrodipicolinate syn 81.5 8.1 0.00028 34.9 9.7 93 14-120 70-178 (294)
300 2ztj_A Homocitrate synthase; ( 81.1 36 0.0012 31.8 16.0 174 28-244 23-223 (382)
301 3kux_A Putative oxidoreductase 81.1 3.8 0.00013 37.4 7.4 58 100-157 59-118 (352)
302 1ep3_A Dihydroorotate dehydrog 80.9 2.3 8E-05 38.0 5.8 90 130-240 98-196 (311)
303 1geq_A Tryptophan synthase alp 80.7 11 0.00038 32.4 10.0 104 39-162 100-218 (248)
304 1a3w_A Pyruvate kinase; allost 80.6 3.8 0.00013 40.3 7.6 104 44-163 203-331 (500)
305 1vrd_A Inosine-5'-monophosphat 80.6 8.7 0.0003 37.0 10.1 115 99-243 241-372 (494)
306 3lrk_A Alpha-galactosidase 1; 80.4 4.2 0.00014 39.8 7.8 110 28-137 45-185 (479)
307 3l5l_A Xenobiotic reductase A; 80.3 12 0.00041 34.8 10.7 92 130-243 225-328 (363)
308 3ixl_A Amdase, arylmalonate de 80.2 7.5 0.00026 34.0 8.8 152 28-197 44-212 (240)
309 4af0_A Inosine-5'-monophosphat 80.2 31 0.0011 34.3 13.9 127 13-163 266-412 (556)
310 2gou_A Oxidoreductase, FMN-bin 80.0 38 0.0013 31.4 16.9 76 142-243 248-325 (365)
311 3e82_A Putative oxidoreductase 79.9 4.1 0.00014 37.5 7.3 59 99-157 58-118 (364)
312 2y1h_A Putative deoxyribonucle 79.9 11 0.00038 32.5 9.8 87 121-242 130-216 (272)
313 3tha_A Tryptophan synthase alp 79.5 15 0.00052 32.7 10.6 207 17-270 18-251 (252)
314 1p0k_A Isopentenyl-diphosphate 79.3 23 0.00077 32.4 12.2 76 75-151 166-271 (349)
315 4a29_A Engineered retro-aldol 79.1 35 0.0012 30.6 13.8 177 14-243 43-236 (258)
316 3a5f_A Dihydrodipicolinate syn 78.8 4.6 0.00016 36.4 7.1 92 14-120 68-170 (291)
317 1oy0_A Ketopantoate hydroxymet 78.6 38 0.0013 30.7 15.6 153 76-241 23-200 (281)
318 4ew6_A D-galactose-1-dehydroge 78.5 3.2 0.00011 37.8 6.0 53 106-158 81-133 (330)
319 3ewb_X 2-isopropylmalate synth 78.4 18 0.00062 32.6 11.0 105 142-271 78-191 (293)
320 3glk_A Acetyl-COA carboxylase 78.3 7.6 0.00026 38.2 9.0 49 117-166 214-273 (540)
321 3r2g_A Inosine 5'-monophosphat 78.2 18 0.0006 34.0 11.1 126 85-242 40-171 (361)
322 3hgj_A Chromate reductase; TIM 78.2 13 0.00044 34.3 10.1 91 28-128 237-333 (349)
323 3q94_A Fructose-bisphosphate a 78.2 12 0.0004 34.2 9.6 75 77-151 124-227 (288)
324 1gox_A (S)-2-hydroxy-acid oxid 77.6 6.8 0.00023 36.6 8.1 76 75-151 213-300 (370)
325 3m2t_A Probable dehydrogenase; 77.4 3.2 0.00011 38.2 5.7 58 99-156 59-118 (359)
326 3p6l_A Sugar phosphate isomera 77.4 24 0.00081 30.0 11.1 123 39-168 27-166 (262)
327 4e38_A Keto-hydroxyglutarate-a 77.4 14 0.00046 32.6 9.5 97 33-158 96-196 (232)
328 3f4l_A Putative oxidoreductase 76.9 4.1 0.00014 37.0 6.3 55 103-157 61-116 (345)
329 2hmc_A AGR_L_411P, dihydrodipi 76.8 8.7 0.0003 35.7 8.5 92 14-119 90-195 (344)
330 3ivs_A Homocitrate synthase, m 76.7 20 0.00069 34.3 11.2 121 121-271 91-221 (423)
331 1mzh_A Deoxyribose-phosphate a 76.7 17 0.00057 31.4 9.9 66 123-194 108-180 (225)
332 1xm3_A Thiazole biosynthesis p 76.4 34 0.0012 30.2 12.0 82 76-162 112-205 (264)
333 3nav_A Tryptophan synthase alp 76.3 13 0.00044 33.4 9.3 75 75-150 138-227 (271)
334 3o07_A Pyridoxine biosynthesis 76.2 3.6 0.00012 37.6 5.5 49 176-244 184-233 (291)
335 2akz_A Gamma enolase, neural; 76.1 8.8 0.0003 36.8 8.6 92 74-166 274-371 (439)
336 3pm6_A Putative fructose-bisph 76.1 6.7 0.00023 36.1 7.4 84 107-240 24-120 (306)
337 2ojp_A DHDPS, dihydrodipicolin 76.0 18 0.00061 32.5 10.2 92 14-120 68-170 (292)
338 2al1_A Enolase 1, 2-phospho-D- 75.8 9.3 0.00032 36.7 8.6 84 74-157 277-366 (436)
339 1f76_A Dihydroorotate dehydrog 75.7 11 0.00036 34.4 8.7 95 28-127 223-333 (336)
340 3obe_A Sugar phosphate isomera 75.7 2.5 8.7E-05 37.8 4.4 65 29-97 109-173 (305)
341 2pcq_A Putative dihydrodipicol 75.4 16 0.00056 32.6 9.7 60 16-92 62-123 (283)
342 2r91_A 2-keto-3-deoxy-(6-phosp 75.3 8 0.00027 34.7 7.6 60 19-92 67-127 (286)
343 1aj0_A DHPS, dihydropteroate s 75.3 12 0.00041 33.9 8.8 57 142-198 36-99 (282)
344 3usb_A Inosine-5'-monophosphat 75.3 10 0.00036 37.0 9.0 115 100-244 261-392 (511)
345 2h6r_A Triosephosphate isomera 75.2 19 0.00064 31.0 9.7 43 74-116 98-141 (219)
346 3h5d_A DHDPS, dihydrodipicolin 75.2 15 0.00051 33.4 9.6 64 14-92 74-139 (311)
347 2nuw_A 2-keto-3-deoxygluconate 75.1 8.1 0.00028 34.7 7.6 87 19-121 68-163 (288)
348 2c6q_A GMP reductase 2; TIM ba 75.0 9.3 0.00032 35.5 8.2 77 74-151 147-243 (351)
349 1eye_A DHPS 1, dihydropteroate 75.0 13 0.00045 33.6 9.0 58 140-198 25-89 (280)
350 3i4e_A Isocitrate lyase; struc 74.8 9.6 0.00033 36.8 8.4 170 74-277 52-226 (439)
351 3a5v_A Alpha-galactosidase; be 74.6 14 0.00047 34.9 9.4 110 28-137 24-165 (397)
352 3gtx_A Organophosphorus hydrol 74.4 36 0.0012 31.2 12.1 146 28-196 57-244 (339)
353 1f8m_A Isocitrate lyase, ICL; 74.3 10 0.00035 36.5 8.4 166 74-277 52-222 (429)
354 3e61_A Putative transcriptiona 74.0 23 0.00079 29.9 10.1 23 31-53 22-44 (277)
355 1uas_A Alpha-galactosidase; TI 73.8 18 0.00062 33.3 9.9 88 28-115 24-132 (362)
356 3fkr_A L-2-keto-3-deoxyarabona 73.8 8.8 0.0003 34.9 7.6 65 14-92 75-142 (309)
357 2qf7_A Pyruvate carboxylase pr 73.5 46 0.0016 35.9 14.1 99 122-244 677-786 (1165)
358 3heb_A Response regulator rece 73.0 28 0.00097 26.4 11.2 81 156-277 57-141 (152)
359 1eep_A Inosine 5'-monophosphat 72.6 32 0.0011 32.2 11.4 106 106-243 165-288 (404)
360 3vk5_A MOEO5; TIM barrel, tran 72.6 6.2 0.00021 36.0 6.1 81 34-128 184-273 (286)
361 2qr6_A IMP dehydrogenase/GMP r 72.6 8.2 0.00028 36.0 7.3 76 75-151 199-297 (393)
362 1icp_A OPR1, 12-oxophytodienoa 72.5 62 0.0021 30.1 17.2 78 142-243 254-333 (376)
363 3k2g_A Resiniferatoxin-binding 72.3 62 0.0021 30.0 13.6 137 38-196 90-263 (364)
364 3bc8_A O-phosphoseryl-tRNA(SEC 72.2 17 0.00057 35.1 9.5 113 108-242 145-265 (450)
365 3l23_A Sugar phosphate isomera 72.1 4.6 0.00016 36.0 5.2 64 29-96 103-168 (303)
366 1ps9_A 2,4-dienoyl-COA reducta 72.0 81 0.0028 31.2 20.6 93 130-244 208-314 (671)
367 1dqu_A Isocitrate lyase; beta 72.0 10 0.00035 37.6 7.9 167 78-277 62-236 (538)
368 3tkf_A Transaldolase; structur 71.8 20 0.00067 33.6 9.5 82 14-111 117-203 (345)
369 2e6f_A Dihydroorotate dehydrog 71.7 28 0.00095 31.1 10.4 123 19-150 96-263 (314)
370 3hbl_A Pyruvate carboxylase; T 71.4 70 0.0024 34.4 14.9 79 141-243 689-768 (1150)
371 1sjd_A N-acylamino acid racema 71.4 61 0.0021 29.5 14.8 121 28-157 141-284 (368)
372 3tdn_A FLR symmetric alpha-bet 71.3 15 0.0005 31.7 8.2 74 145-242 36-110 (247)
373 3kru_A NADH:flavin oxidoreduct 71.3 48 0.0016 30.5 12.1 100 121-243 198-310 (343)
374 3jrx_A Acetyl-COA carboxylase 71.0 8.8 0.0003 38.3 7.4 49 117-166 230-289 (587)
375 1p4c_A L(+)-mandelate dehydrog 70.8 9.9 0.00034 35.6 7.4 75 76-151 214-298 (380)
376 2v82_A 2-dehydro-3-deoxy-6-pho 70.7 16 0.00055 30.6 8.1 69 79-149 93-165 (212)
377 2y5s_A DHPS, dihydropteroate s 70.6 10 0.00035 34.6 7.2 73 141-240 43-122 (294)
378 2rgy_A Transcriptional regulat 70.6 38 0.0013 29.0 10.7 21 145-165 115-135 (290)
379 1ka9_F Imidazole glycerol phos 70.4 12 0.00041 32.1 7.4 89 32-133 154-249 (252)
380 3i65_A Dihydroorotate dehydrog 70.3 9.4 0.00032 36.6 7.1 98 15-119 269-380 (415)
381 3o74_A Fructose transport syst 70.2 27 0.00092 29.2 9.5 22 144-165 106-127 (272)
382 3qn3_A Enolase; structural gen 70.2 9.8 0.00033 36.4 7.3 94 73-167 264-365 (417)
383 4do4_A Alpha-N-acetylgalactosa 70.2 8.4 0.00029 35.7 6.7 111 28-138 34-171 (400)
384 2vef_A Dihydropteroate synthas 70.2 7 0.00024 36.0 6.0 58 141-198 30-94 (314)
385 2ptz_A Enolase; lyase, glycoly 70.0 10 0.00035 36.2 7.4 31 75-105 277-307 (432)
386 2nql_A AGR_PAT_674P, isomerase 70.0 46 0.0016 30.8 11.8 44 6-53 141-185 (388)
387 3tr9_A Dihydropteroate synthas 70.0 9.4 0.00032 35.3 6.8 71 141-235 46-127 (314)
388 3tva_A Xylose isomerase domain 69.8 6.6 0.00022 34.1 5.6 65 28-96 96-161 (290)
389 3dx5_A Uncharacterized protein 69.8 2.7 9.2E-05 36.6 3.0 67 28-96 78-145 (286)
390 3k30_A Histamine dehydrogenase 69.7 92 0.0032 30.9 17.0 91 130-244 224-328 (690)
391 3m16_A Transaldolase; dimer, m 69.7 23 0.0008 32.8 9.5 81 14-110 98-183 (329)
392 3cqj_A L-ribulose-5-phosphate 69.6 2.7 9.2E-05 36.9 3.0 65 30-96 104-169 (295)
393 3vzx_A Heptaprenylglyceryl pho 69.5 12 0.00042 32.9 7.2 81 34-128 140-223 (228)
394 3k4h_A Putative transcriptiona 69.4 34 0.0012 29.0 10.1 60 106-166 69-139 (292)
395 3dbi_A Sugar-binding transcrip 69.2 36 0.0012 29.9 10.5 93 74-166 80-189 (338)
396 1gvf_A Tagatose-bisphosphate a 69.0 13 0.00045 33.8 7.5 100 110-274 18-123 (286)
397 3lg3_A Isocitrate lyase; conse 68.9 14 0.00047 35.7 7.9 168 74-277 49-226 (435)
398 2fym_A Enolase; RNA degradosom 68.7 21 0.0007 33.9 9.2 33 73-105 270-302 (431)
399 3a24_A Alpha-galactosidase; gl 68.6 16 0.00054 37.0 8.6 103 31-135 306-423 (641)
400 3o63_A Probable thiamine-phosp 68.5 14 0.00047 32.6 7.4 129 28-166 77-221 (243)
401 3oix_A Putative dihydroorotate 68.1 14 0.00046 34.4 7.6 64 129-194 127-198 (345)
402 3qk7_A Transcriptional regulat 67.7 37 0.0013 29.2 10.0 90 76-166 29-134 (294)
403 1k77_A EC1530, hypothetical pr 67.6 4.8 0.00016 34.3 4.1 67 28-97 79-147 (260)
404 4hb7_A Dihydropteroate synthas 67.5 12 0.00042 33.8 6.9 71 140-240 26-106 (270)
405 3tqp_A Enolase; energy metabol 67.1 15 0.00053 35.1 7.9 84 73-156 266-357 (428)
406 1tx2_A DHPS, dihydropteroate s 67.1 13 0.00044 33.9 7.1 72 142-240 61-140 (297)
407 3vnd_A TSA, tryptophan synthas 67.1 19 0.00065 32.2 8.1 75 75-150 136-225 (267)
408 3cqj_A L-ribulose-5-phosphate 67.0 34 0.0012 29.6 9.7 42 124-168 154-198 (295)
409 3kke_A LACI family transcripti 67.0 61 0.0021 27.8 11.5 92 74-166 32-139 (303)
410 3vkj_A Isopentenyl-diphosphate 67.0 14 0.00047 34.7 7.4 130 17-151 120-287 (368)
411 3egc_A Putative ribose operon 67.0 32 0.0011 29.3 9.4 22 144-165 111-132 (291)
412 1h5y_A HISF; histidine biosynt 66.9 17 0.00059 30.6 7.6 74 145-242 34-108 (253)
413 3n9r_A Fructose-bisphosphate a 66.8 32 0.0011 31.6 9.7 75 76-151 117-224 (307)
414 1m3u_A 3-methyl-2-oxobutanoate 66.6 72 0.0025 28.5 14.9 108 77-193 7-134 (264)
415 1r0m_A N-acylamino acid racema 66.1 60 0.0021 29.7 11.7 22 28-53 148-169 (375)
416 1w3i_A EDA, 2-keto-3-deoxy glu 65.9 14 0.00047 33.3 7.0 88 19-121 68-164 (293)
417 2e1d_A Transaldolase; pentose 65.9 28 0.00097 32.2 9.2 124 14-158 97-226 (331)
418 1me8_A Inosine-5'-monophosphat 65.8 55 0.0019 31.6 11.8 103 32-151 243-372 (503)
419 3b0p_A TRNA-dihydrouridine syn 65.8 67 0.0023 29.4 11.9 128 28-168 68-228 (350)
420 2uv8_G Fatty acid synthase sub 65.8 1.3E+02 0.0044 34.6 16.0 113 106-245 673-807 (2051)
421 1rvg_A Fructose-1,6-bisphospha 65.7 21 0.00072 32.8 8.3 32 109-140 16-51 (305)
422 3jy6_A Transcriptional regulat 65.6 53 0.0018 27.7 10.6 59 106-166 63-131 (276)
423 3c1a_A Putative oxidoreductase 65.4 13 0.00045 33.1 6.8 57 102-158 64-121 (315)
424 3qvl_A Putative hydantoin race 65.4 44 0.0015 29.2 10.1 36 22-57 41-79 (245)
425 3hdg_A Uncharacterized protein 65.4 39 0.0013 24.9 10.0 88 142-274 39-128 (137)
426 1z41_A YQJM, probable NADH-dep 65.3 10 0.00036 34.7 6.2 91 28-127 227-321 (338)
427 1jx6_A LUXP protein; protein-l 65.3 64 0.0022 28.1 11.3 133 29-165 12-182 (342)
428 3hjz_A Transaldolase B; parach 65.3 27 0.00091 32.5 8.9 81 14-110 94-179 (334)
429 3zwt_A Dihydroorotate dehydrog 64.8 8.1 0.00028 36.2 5.4 126 15-148 221-362 (367)
430 3ngf_A AP endonuclease, family 64.7 5.8 0.0002 34.3 4.2 68 28-97 87-154 (269)
431 2pgw_A Muconate cycloisomerase 64.6 61 0.0021 29.8 11.4 22 28-53 147-168 (384)
432 3tva_A Xylose isomerase domain 64.5 67 0.0023 27.5 14.0 41 124-168 146-186 (290)
433 3inp_A D-ribulose-phosphate 3- 64.5 75 0.0026 27.9 11.7 138 74-243 75-226 (246)
434 1rd5_A Tryptophan synthase alp 64.5 31 0.0011 30.0 8.9 26 137-163 26-51 (262)
435 2nli_A Lactate oxidase; flavoe 64.3 24 0.00082 32.9 8.6 75 76-151 218-304 (368)
436 3f6p_A Transcriptional regulat 63.9 39 0.0013 24.5 9.2 82 126-243 22-104 (120)
437 1thf_D HISF protein; thermophI 63.9 13 0.00045 31.9 6.3 90 32-134 153-249 (253)
438 1i60_A IOLI protein; beta barr 63.8 6.6 0.00023 33.5 4.3 66 30-98 80-147 (278)
439 3brq_A HTH-type transcriptiona 63.8 55 0.0019 27.6 10.3 91 74-165 38-146 (296)
440 1kbi_A Cytochrome B2, L-LCR; f 63.7 1.1E+02 0.0038 29.7 14.6 142 74-242 207-373 (511)
441 3gr7_A NADPH dehydrogenase; fl 63.7 11 0.00039 34.6 6.2 89 29-128 228-322 (340)
442 4dbe_A Orotidine 5'-phosphate 63.7 34 0.0012 29.5 8.9 115 103-239 22-141 (222)
443 1nsj_A PRAI, phosphoribosyl an 63.6 23 0.0008 30.3 7.7 60 45-105 20-93 (205)
444 3lmz_A Putative sugar isomeras 63.5 63 0.0021 27.3 10.6 118 38-169 34-166 (257)
445 2g0w_A LMO2234 protein; putati 63.5 41 0.0014 29.3 9.6 121 40-168 42-186 (296)
446 1qop_A Tryptophan synthase alp 63.5 41 0.0014 29.5 9.6 76 75-151 135-225 (268)
447 3e3m_A Transcriptional regulat 63.2 40 0.0014 29.9 9.6 91 74-166 87-195 (355)
448 1jub_A Dihydroorotate dehydrog 63.1 81 0.0028 27.9 13.3 127 28-167 104-273 (311)
449 1wbh_A KHG/KDPG aldolase; lyas 63.0 71 0.0024 27.2 11.1 120 81-239 11-135 (214)
450 2xed_A Putative maleate isomer 62.9 45 0.0015 29.5 9.8 134 45-197 88-240 (273)
451 2agk_A 1-(5-phosphoribosyl)-5- 62.9 18 0.00061 32.0 7.1 137 32-195 40-211 (260)
452 3tb6_A Arabinose metabolism tr 62.9 69 0.0023 27.0 11.5 93 74-166 32-145 (298)
453 3ngf_A AP endonuclease, family 62.8 70 0.0024 27.2 10.8 37 41-92 30-66 (269)
454 3u0h_A Xylose isomerase domain 62.7 5.3 0.00018 34.3 3.5 62 31-97 81-145 (281)
455 3lab_A Putative KDPG (2-keto-3 62.6 30 0.001 30.1 8.3 97 33-158 75-181 (217)
456 3eoo_A Methylisocitrate lyase; 62.6 14 0.00049 33.7 6.5 83 14-117 153-243 (298)
457 3hzh_A Chemotaxis response reg 62.5 50 0.0017 25.3 9.2 85 125-243 55-142 (157)
458 1yad_A Regulatory protein TENI 62.2 17 0.00058 30.7 6.6 72 76-151 101-183 (221)
459 3h5i_A Response regulator/sens 62.1 19 0.00064 27.1 6.3 102 125-273 24-126 (140)
460 3l5l_A Xenobiotic reductase A; 61.8 36 0.0012 31.4 9.3 91 34-128 246-340 (363)
461 3uw2_A Phosphoglucomutase/phos 61.8 15 0.00052 35.6 6.9 62 189-272 194-256 (485)
462 3h5o_A Transcriptional regulat 61.6 49 0.0017 29.1 9.8 92 73-165 78-185 (339)
463 3ajx_A 3-hexulose-6-phosphate 61.6 67 0.0023 26.4 10.9 101 41-162 71-184 (207)
464 1yx1_A Hypothetical protein PA 61.3 65 0.0022 27.3 10.3 118 38-168 27-165 (264)
465 1mxs_A KDPG aldolase; 2-keto-3 61.3 77 0.0026 27.3 10.8 122 79-239 19-145 (225)
466 3jte_A Response regulator rece 61.2 48 0.0016 24.6 12.7 102 125-274 22-126 (143)
467 2p0o_A Hypothetical protein DU 60.8 1.1E+02 0.0038 28.7 12.4 142 35-194 18-176 (372)
468 3d8u_A PURR transcriptional re 60.6 36 0.0012 28.6 8.4 21 32-52 18-38 (275)
469 3cjp_A Predicted amidohydrolas 60.6 14 0.00048 31.8 5.9 50 120-169 133-183 (272)
470 3elf_A Fructose-bisphosphate a 60.5 78 0.0027 29.5 11.2 23 29-51 69-91 (349)
471 3uj2_A Enolase 1; enzyme funct 60.5 19 0.00065 34.7 7.2 83 74-156 293-383 (449)
472 2fep_A Catabolite control prot 60.5 72 0.0025 27.1 10.5 59 106-165 72-140 (289)
473 3hcw_A Maltose operon transcri 60.2 74 0.0025 27.2 10.6 59 106-165 68-138 (295)
474 2w6r_A Imidazole glycerol phos 60.0 21 0.00073 30.8 7.0 81 32-125 158-241 (266)
475 3bbl_A Regulatory protein of L 59.6 81 0.0028 26.7 10.8 91 74-165 25-132 (287)
476 3nbm_A PTS system, lactose-spe 59.6 39 0.0013 25.9 7.7 79 9-92 1-83 (108)
477 2qyg_A Ribulose bisphosphate c 59.5 1.3E+02 0.0044 29.0 13.7 175 66-270 164-364 (452)
478 2dqw_A Dihydropteroate synthas 59.5 12 0.00041 34.2 5.4 57 142-199 50-113 (294)
479 4g9p_A 4-hydroxy-3-methylbut-2 59.5 54 0.0018 31.3 10.0 92 28-138 36-145 (406)
480 3kjx_A Transcriptional regulat 59.4 80 0.0027 27.7 10.9 131 33-165 39-192 (344)
481 2nzl_A Hydroxyacid oxidase 1; 59.4 23 0.00079 33.3 7.5 75 76-151 241-327 (392)
482 3l5a_A NADH/flavin oxidoreduct 59.4 1.2E+02 0.0041 28.6 17.6 92 130-244 242-350 (419)
483 2ekc_A AQ_1548, tryptophan syn 59.0 47 0.0016 29.1 9.1 74 74-148 134-223 (262)
484 3gv0_A Transcriptional regulat 59.0 44 0.0015 28.5 8.8 45 121-165 80-134 (288)
485 2poz_A Putative dehydratase; o 58.7 1.1E+02 0.0036 28.3 11.9 85 72-157 212-301 (392)
486 1tzz_A Hypothetical protein L1 58.6 1.1E+02 0.0038 28.1 12.3 22 28-53 165-186 (392)
487 3kws_A Putative sugar isomeras 58.5 14 0.00048 32.0 5.5 67 29-97 99-169 (287)
488 3k9c_A Transcriptional regulat 58.3 64 0.0022 27.5 9.8 89 76-166 30-134 (289)
489 3qc0_A Sugar isomerase; TIM ba 58.2 7.4 0.00025 33.2 3.6 66 29-97 78-146 (275)
490 3cny_A Inositol catabolism pro 57.9 52 0.0018 28.2 9.2 112 37-164 34-188 (301)
491 2hsa_B 12-oxophytodienoate red 57.8 1.2E+02 0.0042 28.3 17.4 78 142-243 258-351 (402)
492 2vp8_A Dihydropteroate synthas 57.4 22 0.00076 32.7 6.8 65 142-235 63-139 (318)
493 1ps9_A 2,4-dienoyl-COA reducta 57.3 17 0.0006 36.1 6.6 95 28-128 226-325 (671)
494 3ivz_A Nitrilase; alpha-beta s 57.2 67 0.0023 27.6 9.8 64 27-94 14-87 (262)
495 3q9s_A DNA-binding response re 57.1 46 0.0016 28.2 8.6 70 142-243 69-139 (249)
496 1w6t_A Enolase; bacterial infe 57.1 22 0.00076 33.9 7.1 32 73-104 282-313 (444)
497 1xi3_A Thiamine phosphate pyro 56.7 23 0.0008 29.3 6.4 123 20-149 45-179 (215)
498 3r0j_A Possible two component 56.4 81 0.0028 26.3 10.0 82 126-243 43-126 (250)
499 1o94_A Tmadh, trimethylamine d 56.3 1.7E+02 0.0057 29.4 16.5 91 130-244 216-325 (729)
500 3ayv_A Putative uncharacterize 56.3 5.7 0.00019 33.9 2.5 65 29-97 71-140 (254)
No 1
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=100.00 E-value=3.5e-78 Score=559.48 Aligned_cols=266 Identities=46% Similarity=0.749 Sum_probs=244.0
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
.+|.++++++|||||+|||+++.+++|++|+++++++++..|++.+|+|+||||+|+|+|+|+++||++|+++|+++||+
T Consensus 14 ~~G~~~~~~viaGPCsie~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~Glp 93 (285)
T 3sz8_A 14 TAGNSLPFVLFGGINVLESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFGVP 93 (285)
T ss_dssp EEETTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCC
T ss_pred eECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCe
Confidence 46778899999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 90 IVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
|+||+||+.+++++.+++|++||||++++|++||+++|+++|||+|||||++|++||++|+++|++.||++|+|||||++
T Consensus 94 ~~Tev~d~~~v~~l~~~vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~ 173 (285)
T 3sz8_A 94 VITDVHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS 173 (285)
T ss_dssp EEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE
T ss_pred EEEEeCCHHHHHHHHHhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
|+|+++++||++|+.||+ | ++||++|+||++|+||+ .+++|+|+|++++.+++||+|+||+|+|||+||||||
T Consensus 174 y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~-----~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~ 248 (285)
T 3sz8_A 174 FGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDP-----LGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDR 248 (285)
T ss_dssp CSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC--------------------HHHHHHHHHHHCCSEEEEEEESCGGG
T ss_pred CCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCC-----cCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhc
Confidence 999888899999999999 8 59999999999999984 4778889999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCccc
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAKVSKGKQR 280 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~~~ 280 (290)
+++||++||+|++|++||+.+|+++.++|+...
T Consensus 249 al~D~~~sl~p~el~~lv~~i~~i~~~lg~~~~ 281 (285)
T 3sz8_A 249 ARCDGPSALPLHQLEGLLSQMKAIDDLVKRMPA 281 (285)
T ss_dssp CSCSSCCCEEGGGHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCchhhccCHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999998644
No 2
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=100.00 E-value=2.2e-78 Score=561.86 Aligned_cols=271 Identities=49% Similarity=0.812 Sum_probs=239.8
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
.+|.++|+++|||||||||+++.+++|++|+++++++|+.+|++.+|+|+||||+|+|+|+|+++||++|+++|+++||+
T Consensus 11 ~iG~~~~~~vIaGPCsie~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp 90 (288)
T 3tml_A 11 EVGLDQPFFLIAGTCVVESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLP 90 (288)
T ss_dssp EESTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCC
T ss_pred EECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCe
Confidence 35677899999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC------CcEEE
Q 022892 90 IVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN------PNVMV 163 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn------~~i~L 163 (290)
|+||+||+.+++++.+++|++||||++|+|++||+++|+++|||+|||||++|++||++|+++|.+.|| ++|+|
T Consensus 91 ~~tev~d~~~v~~l~~~vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L 170 (288)
T 3tml_A 91 VLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMA 170 (288)
T ss_dssp EEEECCSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEE
T ss_pred EEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEE
Confidence 999999999999999999999999999999999999999999999999998899999999999999999 89999
Q ss_pred EeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 164 CERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 164 ~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
||||++|+|++..+||++|+.||+||+||++|+||++|+||+ .+++|+|+|++++.+++||+|+||+|+|||+||
T Consensus 171 ~erg~~y~~~~~~vdl~~i~~lk~~~~pV~~D~sHs~q~p~~-----~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 171 CERGVSFGYNNLVSDMRSLAIMRETNAPVVFDATHSVQLPGG-----QGTSSGGQREFVPVLARAAVATGVAGLFMETHP 245 (288)
T ss_dssp EECCEECSSSCEECCHHHHHHGGGGSSCEEEEHHHHTCCCC-------------CTTHHHHHHHHHHHHCCSEEEEEEES
T ss_pred EeCCCCCCCCcCcCCHHHHHHHHhcCCcEEEcCCcccccCCc-----ccCCCCCchhhHHHHHHHHHHcCCCEEEEeecc
Confidence 999999988777789999999998999999999999999984 467888999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCccccccCC
Q 022892 244 DPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNIDL 285 (290)
Q Consensus 244 t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~~~~~~~~ 285 (290)
||||+++||++||+|++|++||+.+|+++.++|+...+++++
T Consensus 246 ~pd~al~D~~~sl~p~el~~lv~~ir~i~~alg~~~~~~~~~ 287 (288)
T 3tml_A 246 NPAEAKSDGPNAVPLNRMGALLETLVTLDQAVKRNPFLENDF 287 (288)
T ss_dssp SGGGCSSCGGGCEEGGGHHHHHHHHHHHHHHHHSSCCGGGGC
T ss_pred ChhhcCCchhhcCCHHHHHHHHHHHHHHHHHhCCCCcccccc
Confidence 999999999999999999999999999999999876666654
No 3
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=100.00 E-value=2.7e-77 Score=555.85 Aligned_cols=261 Identities=49% Similarity=0.838 Sum_probs=237.6
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
+|.++++++|||||||||.++.+++|++|++++++.|+..|++.+|+|+||||+|+|+|+|+++||++|+++|+++||+|
T Consensus 36 ~G~~~~l~vIaGPCsies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv 115 (298)
T 3fs2_A 36 FSNSAPLALIAGPCQMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPV 115 (298)
T ss_dssp ECTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCE
T ss_pred ECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeE
Confidence 56677899999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred EEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC
Q 022892 91 VTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF 170 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~ 170 (290)
+||+||+.+++++++++|++||||++++|++||+++|++++||+|||||++|++||++|+++|.+.||++|+|||||++|
T Consensus 116 ~Tev~D~~~v~~l~~~vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y 195 (298)
T 3fs2_A 116 LTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSF 195 (298)
T ss_dssp EEECCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEEC
T ss_pred EEEeCCHHHHHHHHhhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCC
Q 022892 171 GYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV 250 (290)
Q Consensus 171 ~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~ 250 (290)
+|+++.+||++|+.||+|++||++|+||++|+||+ .+++|+|+|++++.+++||+|+||+|+|||+||||||+++
T Consensus 196 ~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~-----~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~ 270 (298)
T 3fs2_A 196 GYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGG-----QGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPS 270 (298)
T ss_dssp SSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC-------------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSS
T ss_pred CCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCc-----ccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCC
Confidence 88887899999999999999999999999999984 3778889999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhC
Q 022892 251 DGPTQWPLRNLEELLEELVAIAKVSK 276 (290)
Q Consensus 251 D~~~sl~p~~l~~lv~~ir~~~~~lg 276 (290)
||++||+|++|++||+.+|+++.+++
T Consensus 271 D~~~sl~p~el~~lv~~ir~i~~a~~ 296 (298)
T 3fs2_A 271 DGPNMVPIDKMPALLEKLMAFDRIAK 296 (298)
T ss_dssp SGGGCEEGGGHHHHHHHHHHHHHHHT
T ss_pred chhhcCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999885
No 4
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=100.00 E-value=2.2e-74 Score=534.59 Aligned_cols=270 Identities=47% Similarity=0.765 Sum_probs=234.7
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
.+|.++|++||||||++||.+.++++|+++++++++++++.+++.+|+|+|||++|+|+|+++++||++|+++|+++||+
T Consensus 9 ~iG~~~~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~Gl~ 88 (280)
T 2qkf_A 9 TLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIP 88 (280)
T ss_dssp EESTTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCC
T ss_pred EECCCCceEEEEecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHcCCc
Confidence 46788899999999999999999999999999999999999999999998999999999999899999999999999999
Q ss_pred EEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 90 IVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
|+||+||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||++|++++++.||++++|||||++
T Consensus 89 ~~te~~d~~~~~~l~~~~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~ 168 (280)
T 2qkf_A 89 VITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSS 168 (280)
T ss_dssp EEEECCSGGGHHHHHHHCSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE
T ss_pred EEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
|+|+++++||++|+.||+ | ++||++||||+||+||+ +++.+.|+|+++..++++|+++||+|+|||+||||||
T Consensus 169 ~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~-----~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~ 243 (280)
T 2qkf_A 169 FGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDA-----GSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKL 243 (280)
T ss_dssp CSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC---------------CHHHHHHHHHHHHHTTCCSEEEEEC------
T ss_pred CCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCc-----cccccCCchhhHHHHHHHHHHcCCCEEEEeecCCccc
Confidence 999888899999999999 7 99999999999999994 4677788999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCccccccC
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNID 284 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~~~~~~~ 284 (290)
+++||++||+|++|++||+.+|+++.++|++.++++|
T Consensus 244 al~D~~~sl~p~~l~~lv~~i~~~~~~~g~~~~~~~e 280 (280)
T 2qkf_A 244 AKCDGPSALPLHLLEDFLIRIKALDDLIKSQPILTIE 280 (280)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHSCCC---
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999999999999999887
No 5
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=100.00 E-value=6.2e-73 Score=521.36 Aligned_cols=261 Identities=51% Similarity=0.794 Sum_probs=246.3
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHc-CCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKV-GLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD 93 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~-G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~ 93 (290)
+|++||||||||||.++.++||++|+++++++ +...||+.+|+|+||||+++|+|+++++||++|+++|+++||+++||
T Consensus 2 ~~l~viaGPCsie~~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l~~~~~e~Glp~~te 81 (267)
T 2nwr_A 2 EKFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTD 81 (267)
T ss_dssp CCEEEEEECSBCSCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred CCcEEEEcCCCcCCHHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCCcCccHHHHHHHHHHHHHhcCCeEEEe
Confidence 57899999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred ecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC
Q 022892 94 VHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN 173 (290)
Q Consensus 94 ~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~ 173 (290)
+||+.+++++++++|++||||++++|++||+++|++++||+|||||++|++||++|++++.+.||++++|||||++|+|+
T Consensus 82 ~~d~~~~~~l~~~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~~y~ 161 (267)
T 2nwr_A 82 IHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTFGYN 161 (267)
T ss_dssp CSSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEECSSS
T ss_pred cCCHHhHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999998998
Q ss_pred CCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCC
Q 022892 174 DLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 253 (290)
Q Consensus 174 ~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~ 253 (290)
++++||++++.||+.+ ||++|+||+||+||+ .|+.+.|+|+++..++++|+++||+|+|||+||||||+++||+
T Consensus 162 ~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G-----~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~pd~al~Dg~ 235 (267)
T 2nwr_A 162 NLVVDFRSLPIMKQWA-KVIYDATHSVQLPGG-----LGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDAS 235 (267)
T ss_dssp CEECCTTHHHHHTTTS-EEEEETTGGGCCTTC-----------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCSSCTT
T ss_pred ccccCHHHHHHHHHcC-CEEEcCCcccccCCC-----cCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCCcccCCCccc
Confidence 8889999999999877 999999999999984 4777789999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCC-cccc
Q 022892 254 TQWPLRNLEELLEELVAIAKVSKG-KQRM 281 (290)
Q Consensus 254 ~sl~p~~l~~lv~~ir~~~~~lg~-~~~~ 281 (290)
+|++|++|++||+.+|+++.++|+ .+++
T Consensus 236 qsl~p~~l~~l~~~i~~~~~~~g~~~~~~ 264 (267)
T 2nwr_A 236 TQLPLSQLEGIIEAILEIREVASKYYETI 264 (267)
T ss_dssp TCEEGGGHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCccccC
Confidence 999999999999999999999998 4443
No 6
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=100.00 E-value=1.9e-72 Score=524.28 Aligned_cols=263 Identities=47% Similarity=0.779 Sum_probs=244.6
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
.+|.++|++||||||++||.+.++++|++|++++++++...+++.+|+|+|||++|+|+|+++++||++|+++|+++||+
T Consensus 12 ~iG~~~~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~~Glp 91 (292)
T 1o60_A 12 DVANDKPFVLFGGMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDTFGVK 91 (292)
T ss_dssp EECTTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCE
T ss_pred EECCCCceEEEEecCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHHcCCc
Confidence 36778899999999999999999999999999999999999999999998999999999999899999999999999999
Q ss_pred EEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 90 IVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
|+|||||+.+++++++++||+||||++++|++||+++|+++|||+|||||++|++||++|++++++.||++++|||||++
T Consensus 92 ~~te~~d~~~~~~l~~~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~ 171 (292)
T 1o60_A 92 IITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN 171 (292)
T ss_dssp EEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE
T ss_pred EEEecCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
|+|+++++||++|+.||+ | ++||++||||+||+||+ +++.+.|+|+++..++++|+++||+|+|||+||||||
T Consensus 172 ~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~-----~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~d~ 246 (292)
T 1o60_A 172 FGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDP-----FGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNPNQ 246 (292)
T ss_dssp CSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC-----------------CTTHHHHHHHHHHHCCSEEEEEEESSGGG
T ss_pred CCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCc-----cccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCccc
Confidence 899888899999999999 7 99999999999999984 4777789999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+++||++||+|++|++||+.+|+++.++|+
T Consensus 247 al~Dg~~sl~p~~l~~lv~~ir~i~~a~g~ 276 (292)
T 1o60_A 247 AKCDGPSALPLSALEGFVSQMKAIDDLVKS 276 (292)
T ss_dssp CSSCCTTCEEGGGHHHHHHHHHHHHHHHHH
T ss_pred CCchhhcCCCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999987
No 7
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=100.00 E-value=1.2e-65 Score=474.98 Aligned_cols=239 Identities=31% Similarity=0.472 Sum_probs=226.4
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
+|.+ +++||||||++||.+..+++|+++++ +|++++++|.|+ |||++++|+|+| ++||++|+++|+++||+|
T Consensus 34 iG~~-~~~vIAgpc~~~~~e~a~~~a~~~k~----~ga~~~k~~~~k--prts~~~f~g~g-~~gl~~l~~~~~~~Gl~~ 105 (276)
T 1vs1_A 34 IGGG-SKAVIAGPCSVESWEQVREAALAVKE----AGAHMLRGGAFK--PRTSPYSFQGLG-LEGLKLLRRAGDEAGLPV 105 (276)
T ss_dssp EBTT-BCEEEEECSBCCCHHHHHHHHHHHHH----HTCSEEECBSSC--CCSSTTSCCCCT-HHHHHHHHHHHHHHTCCE
T ss_pred ECCC-CeEEEEecCCCCCHHHHHHHHHHHHH----hCCCEEEeEEEe--CCCChhhhcCCC-HHHHHHHHHHHHHcCCcE
Confidence 5555 79999999999998888888888887 599999999998 999999999998 899999999999999999
Q ss_pred EEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-C
Q 022892 91 VTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-M 169 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~ 169 (290)
+|||||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|++++++.||++++|||||+ +
T Consensus 106 ~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~ 185 (276)
T 1vs1_A 106 VTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRT 185 (276)
T ss_dssp EEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCC
T ss_pred EEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999655 6
Q ss_pred C-CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 F-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~-~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
| +|+.+++||++++.||+ ||+||++||||++ |.++++..++++|+++||+|+|||+||||||
T Consensus 186 yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~----------------g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~ 249 (276)
T 1vs1_A 186 FEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPA----------------GRRSLVPALAKAGLAAGADGLIVEVHPNPEE 249 (276)
T ss_dssp SCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHH----------------CSGGGHHHHHHHHHHTTCSEEEEEBCSSGGG
T ss_pred CCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCC----------------CccchHHHHHHHHHHcCCCEEEEEecCCccc
Confidence 7 58999999999999999 8999999999996 7899999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHH
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAK 273 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~ 273 (290)
+++||++||+|++|++||+.+|+++.
T Consensus 250 a~~D~~~sl~p~~~~~lv~~i~~~~~ 275 (276)
T 1vs1_A 250 ALSDAKQQLTPGEFARLMGELRWHRL 275 (276)
T ss_dssp CSSCGGGCBCHHHHHHHHHHHHHTTC
T ss_pred CCCchhcCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998764
No 8
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=100.00 E-value=3.1e-65 Score=485.35 Aligned_cols=243 Identities=30% Similarity=0.466 Sum_probs=231.5
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
+|.+ +++||||||++||.+..+++|+++++ +|+++++++.|+ |||++|+|+|++ ++||++|+++|+++||+|
T Consensus 102 iG~~-~~~vIAgpcs~es~e~a~~~a~~~k~----aGa~~vr~q~fK--prTs~~~f~glg-~egl~~l~~~~~e~Gl~~ 173 (350)
T 1vr6_A 102 IGNG-YFTIIAGPCSVEGREMLMETAHFLSE----LGVKVLRGGAYK--PRTSPYSFQGLG-EKGLEYLREAADKYGMYV 173 (350)
T ss_dssp ESTT-EEEEEEECSBCCCHHHHHHHHHHHHH----TTCCEEECBSCC--CCCSTTSCCCCT-HHHHHHHHHHHHHHTCEE
T ss_pred ECCC-CeEEEEeCCCcCCHHHHHHHHHHHHH----cCCCeeeeeEEe--CCCChHhhcCCC-HHHHHHHHHHHHHcCCcE
Confidence 4555 79999999999998888888888887 699999999998 999999999998 899999999999999999
Q ss_pred EEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-C
Q 022892 91 VTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-M 169 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~ 169 (290)
+|||||+.+++++++++|++|||||+++|++||+++|+++|||+|||||++|++||+.|++++++.||++++|||||+ +
T Consensus 174 ~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~t 253 (350)
T 1vr6_A 174 VTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRT 253 (350)
T ss_dssp EEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCC
T ss_pred EEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998887 4
Q ss_pred C-CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 F-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~-~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
| +|+++++||++|+.||+ |++||++||||++ |+++++..++++|+++||+|+|||+||||||
T Consensus 254 yp~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~----------------G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~ 317 (350)
T 1vr6_A 254 FEKATRNTLDISAVPIIRKESHLPILVDPSHSG----------------GRRDLVIPLSRAAIAVGAHGIIVEVHPEPEK 317 (350)
T ss_dssp SCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHH----------------CSGGGHHHHHHHHHHHTCSEEEEEBCSCGGG
T ss_pred CCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCC----------------cccchHHHHHHHHHHhCCCEEEEEecCCccc
Confidence 6 57788999999999999 8999999999996 7899999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+++||++||+|++|++||+.+|+++.++|+
T Consensus 318 al~D~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 318 ALSDGKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp CSSCGGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCchhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999986
No 9
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=100.00 E-value=1.2e-64 Score=465.49 Aligned_cols=238 Identities=33% Similarity=0.514 Sum_probs=224.5
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
+|.+ ++||||||++||.+.++++|+++++ +|+++||+|+|+ |||++|+|+|++ ++||++|+++|+++||+|
T Consensus 20 iG~~--~~vIAgpc~~~~~e~a~~~a~~l~~----~Ga~~vk~~~fk--prts~~~~~g~~-~egl~~l~~~~~~~Gl~~ 90 (262)
T 1zco_A 20 FGEG--FTIIAGPCSIESREQIMKVAEFLAE----VGIKVLRGGAFK--PRTSPYSFQGYG-EKALRWMREAADEYGLVT 90 (262)
T ss_dssp ETSS--CEEEEECSBCCCHHHHHHHHHHHHH----TTCCEEECBSSC--CCSSTTSCCCCT-HHHHHHHHHHHHHHTCEE
T ss_pred ECCC--cEEEEeCCCCCCHHHHHHHHHHHHH----cCCCEEEEEecc--cCCCcccccCcc-HHHHHHHHHHHHHcCCcE
Confidence 4445 8999999999988888888887777 699999999995 899999999987 899999999999999999
Q ss_pred EEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-C
Q 022892 91 VTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-M 169 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~ 169 (290)
+|||||+.+++++.+++|++||||++++|++||+++|++++||+|||||++|++||++|++++.+.||++++|||||. .
T Consensus 91 ~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~ 170 (262)
T 1zco_A 91 VTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRT 170 (262)
T ss_dssp EEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCC
T ss_pred EEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999994 3
Q ss_pred C-CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 F-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~-~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
| +|+++++||++++.||+ |++||++||||++ |.+++++.++++|+++||+|+|||+||||||
T Consensus 171 ~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~----------------g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~ 234 (262)
T 1zco_A 171 FETATRFTLDISAVPVVKELSHLPIIVDPSHPA----------------GRRSLVIPLAKAAYAIGADGIMVEVHPEPEK 234 (262)
T ss_dssp SCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTT----------------CSGGGHHHHHHHHHHTTCSEEEEEBCSSGGG
T ss_pred CCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCC----------------CccchHHHHHHHHHHcCCCEEEEEecCCccc
Confidence 4 79889999999999999 8999999999996 7788999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHH
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAK 273 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~ 273 (290)
+++||++|++|++|++||+.+|+++.
T Consensus 235 al~D~~~sl~p~~~~~l~~~i~~~~~ 260 (262)
T 1zco_A 235 ALSDSQQQLTFDDFLQLLKELEALGW 260 (262)
T ss_dssp CSSCTTTCBCHHHHHHHHHHHHHTTC
T ss_pred cCChhhcCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998864
No 10
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=100.00 E-value=3.3e-65 Score=484.75 Aligned_cols=245 Identities=14% Similarity=0.098 Sum_probs=229.8
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC--Cccc--CC---------------CC
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT--SSKS--FR---------------GP 70 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt--s~~~--~~---------------g~ 70 (290)
.||.+++++||||||+ ||+++++.|++|++.|+++|+++||+|.|+ ||| ++++ |+ ++
T Consensus 13 ~iG~~~~~~iIAe~g~--NH~gs~e~a~~li~~ak~aGadavKfq~~k--~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l 88 (349)
T 2wqp_A 13 SVGYNHEPLIICEIGI--NHEGSLKTAFEMVDAAYNAGAEVVKHQTHI--VEDEMSDEAKQVIPGNADVSIYEIMERCAL 88 (349)
T ss_dssp EEETTSCCEEEEEEET--TTTTCHHHHHHHHHHHHHHTCSEEEEEECC--HHHHCCGGGGGCCCTTCSSCHHHHHHHHCC
T ss_pred EECCCCceEEEEecCC--cccCCHHHHHHHHHHHHHhCCCEEeeeecc--cccccCcchhccccCCCCccHHHHHHHhCC
Confidence 4777888999999999 999999999999999999999999999999 788 8887 87 34
Q ss_pred ChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh-cceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 022892 71 GMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 71 ~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~-~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A 149 (290)
+ ++++++|+++|++.||+|+|||||+++++++.++ +|++||||++|+|++||+++|+++|||+|||||+ |++||+.|
T Consensus 89 ~-~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma-t~~Ei~~A 166 (349)
T 2wqp_A 89 N-EEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN-SIESIKKS 166 (349)
T ss_dssp C-HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHH
T ss_pred C-HHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHH
Confidence 5 7999999999999999999999999999999996 9999999999999999999999999999999999 99999999
Q ss_pred HHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 022892 150 AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 227 (290)
Q Consensus 150 ve~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~ 227 (290)
+++|++.|| +++||||.+.||.+.+++||++|+.||+ | |+|||+ |||+. | ..+++
T Consensus 167 ve~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~-sdHt~----------------G-----~~~~~ 223 (349)
T 2wqp_A 167 VEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGL-SDHTL----------------D-----NYACL 223 (349)
T ss_dssp HHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEE-ECCSS----------------S-----SHHHH
T ss_pred HHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEe-CCCCC----------------c-----HHHHH
Confidence 999999999 9999999999887778999999999999 9 999986 99996 6 68999
Q ss_pred HHHHcCCCEEEEeeeCCCCCCC--CCCCCCCChHHHHHHHHHHHHHHHHhCC--ccccccCC
Q 022892 228 TAIAVGVDGVFMEVHDDPLNAP--VDGPTQWPLRNLEELLEELVAIAKVSKG--KQRMNIDL 285 (290)
Q Consensus 228 aAva~GA~G~~IEkH~t~dka~--~D~~~sl~p~~l~~lv~~ir~~~~~lg~--~~~~~~~~ 285 (290)
+|||+||+ ||||||||||++ +||++||+|+||++||+.+|+++.++|+ |.+.+.|.
T Consensus 224 AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~~~k~~~~~E~ 283 (349)
T 2wqp_A 224 GAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKDTIIAGEK 283 (349)
T ss_dssp HHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSCCTTCCCGGGH
T ss_pred HHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCCCCCCcCHHHH
Confidence 99999998 999999999999 7999999999999999999999999998 55555554
No 11
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=100.00 E-value=1.7e-64 Score=484.32 Aligned_cols=248 Identities=12% Similarity=0.118 Sum_probs=230.2
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC--Cccc--CC----------------C
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT--SSKS--FR----------------G 69 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt--s~~~--~~----------------g 69 (290)
.||.++++|||||+|. ||+|+++.|++|++.|+++|+++||+|.|+ ||| ++++ |+ +
T Consensus 22 ~ig~~~~~~IIAEiG~--NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k--~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~ 97 (385)
T 1vli_A 22 TVGKDAPVFIIAEAGI--NHDGKLDQAFALIDAAAEAGADAVKFQMFQ--ADRMYQKDPGLYKTAAGKDVSIFSLVQSME 97 (385)
T ss_dssp EEETTSCCEEEEEEET--TTTTCHHHHHHHHHHHHHHTCSEEEECCBC--GGGGTSCCC---------CCCHHHHGGGBS
T ss_pred EeCCCCCcEEEEeecC--cccccHHHHHHHHHHHHHhCCCEEeeeeec--cCcccCcchhhhccCCCCCccHHHHHHhcC
Confidence 4677889999999999 999999999999999999999999999999 677 8887 76 3
Q ss_pred CChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh-cceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 022892 70 PGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVN 148 (290)
Q Consensus 70 ~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~-~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~ 148 (290)
++ ++++++|+++|++.||+|+|||||+++++++.++ +|+|||||++++|++||+++|+++|||+|||||+ |++||+.
T Consensus 98 l~-~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGma-Tl~Ei~~ 175 (385)
T 1vli_A 98 MP-AEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGA-EISDVHE 175 (385)
T ss_dssp SC-GGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHH
T ss_pred CC-HHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHH
Confidence 44 7999999999999999999999999999999996 9999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 022892 149 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 226 (290)
Q Consensus 149 Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a 226 (290)
|+++|++.||++|+||||.+.||.+.+++||++|+.||+ | ++|||+ |||+. |+ ..++
T Consensus 176 Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~-SdHt~----------------G~----~~~~ 234 (385)
T 1vli_A 176 AWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGF-SDHSE----------------HP----TEAP 234 (385)
T ss_dssp HHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEE-EECCS----------------SS----SHHH
T ss_pred HHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEe-CCCCC----------------Cc----hHHH
Confidence 999999999999999999999887788999999999999 9 999976 99996 53 5689
Q ss_pred HHHHHcCCCEEEEeeeCCCCCCC--CCCCCCCChHHHHHHHHHHHHHH-------------HHhCC--ccccccCCC
Q 022892 227 RTAIAVGVDGVFMEVHDDPLNAP--VDGPTQWPLRNLEELLEELVAIA-------------KVSKG--KQRMNIDLT 286 (290)
Q Consensus 227 ~aAva~GA~G~~IEkH~t~dka~--~D~~~sl~p~~l~~lv~~ir~~~-------------~~lg~--~~~~~~~~~ 286 (290)
++|||+||+ ||||||||||++ +||++||+|+||++||+.+|+++ .++|+ |++.+.|..
T Consensus 235 ~AAvAlGA~--iIEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~~~~~~~~~~~~~~~alG~~~k~~~~~E~~ 309 (385)
T 1vli_A 235 CAAVRLGAK--LIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTTAIEGE 309 (385)
T ss_dssp HHHHHTTCS--EEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHCCSSCCCCTTTCS
T ss_pred HHHHHcCCC--EEEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHHhhcccccccchHHHHhCcccCccCHHHHH
Confidence 999999998 999999999999 79999999999999999999999 99998 666677664
No 12
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=100.00 E-value=1.9e-63 Score=479.03 Aligned_cols=243 Identities=31% Similarity=0.479 Sum_probs=224.8
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
||.+ ++.+|+|||++||.+.++++|+++++ +|+++|+++.|+ |||++|+|+|++ .+|+++|+++|+++||+|
T Consensus 138 iG~~-~~~~Iigpcsves~e~a~~~a~~~k~----aGa~~vk~q~fk--prts~~~f~gl~-~egl~~L~~~~~~~Gl~~ 209 (385)
T 3nvt_A 138 IGNG-EPVFVFGPCSVESYEQVAAVAESIKA----KGLKLIRGGAFK--PRTSPYDFQGLG-LEGLKILKRVSDEYGLGV 209 (385)
T ss_dssp ETSS-SCEEEEECSBCCCHHHHHHHHHHHHH----TTCCEEECBSSC--CCSSTTSCCCCT-HHHHHHHHHHHHHHTCEE
T ss_pred ECCC-CeEEEEEeCCcCCHHHHHHHHHHHHH----cCCCeEEccccc--CCCChHhhcCCC-HHHHHHHHHHHHHcCCEE
Confidence 4554 46899999999987777777777766 799999999996 999999999999 699999999999999999
Q ss_pred EEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-
Q 022892 91 VTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM- 169 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~- 169 (290)
+|||||+.+++++.+++|++||||++++|++||+++|++++||+|||||++|++||++|+++|.+.||++++|||||++
T Consensus 210 ~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~ 289 (385)
T 3nvt_A 210 ISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRT 289 (385)
T ss_dssp EEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCC
T ss_pred EEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999779999999999999999999999999764
Q ss_pred CC-CCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FG-YNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~-y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
|| |+.+++||++|+.||+ ||+||++|+||+. |+|++++.++++|+|+||+|+|||+||||||
T Consensus 290 yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~----------------G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~ 353 (385)
T 3nvt_A 290 YEKATRNTLDISAVPILKKETHLPVMVDVTHST----------------GRKDLLLPCAKAALAIEADGVMAEVHPDPAV 353 (385)
T ss_dssp SCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHH----------------CCGGGHHHHHHHHHHTTCSEEEEEBCSCGGG
T ss_pred CCCCCccccCHHHHHHHHHhcCCCEEEcCCCCC----------------CccchHHHHHHHHHHhCCCEEEEEecCChhh
Confidence 65 4668899999999999 9999988999985 8899999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 248 APVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+++||++||+|++|++||+.+|+++.++++
T Consensus 354 a~~D~~~sl~p~el~~lv~~i~~i~~~~~~ 383 (385)
T 3nvt_A 354 ALSDSAQQMDIPEFEEFWNAILASNLVPHK 383 (385)
T ss_dssp CSSCTTTSBCHHHHHHHHHHHHHHTCCC--
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999987654
No 13
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=7.3e-60 Score=447.74 Aligned_cols=237 Identities=10% Similarity=-0.043 Sum_probs=213.6
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCC-----EEeccccccCCCCCc-------cc----CC--CCChhHHH
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLP-----LVFKSSFDKANRTSS-------KS----FR--GPGMVEGL 76 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~-----~V~~~~~~k~~rts~-------~~----~~--g~~~~~~l 76 (290)
.++|||||+++ ||||++++|++|++.|+++|+| +||||+|+.+..+++ +. |+ .++ ++++
T Consensus 4 ~~~~IIAEig~--NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~-~e~~ 80 (350)
T 3g8r_A 4 SKPLFIFEMAN--NHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQ-PEQM 80 (350)
T ss_dssp -CCEEEEECTT--TTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCC-HHHH
T ss_pred CCCEEEEEECC--CccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCC-HHHH
Confidence 47899999999 9999999999999999999998 999999985432222 11 11 134 6899
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhhh-cceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~-~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
++|+++|++.||+|+|||||+++++++.++ +|++||||++++|++||+++|+++|||+|||||+ |++||+.|+++|.+
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms-tl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA-RREDIDKVVSFMLH 159 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC-CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC-CHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 9999999999999999999999999999999999 99999999999999
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 233 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G 233 (290)
.|| +++||||.+.||.+.+++||++|+.||+ | ++|||+ |||+. |.+ ..++++|||+|
T Consensus 160 ~g~-~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~-SdHt~----------------g~~---~~~~~AAvAlG 218 (350)
T 3g8r_A 160 RGK-DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGY-STHED----------------PDL---MEPIMLAVAQG 218 (350)
T ss_dssp TTC-CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEE-EECCC----------------SSC---CHHHHHHHHTT
T ss_pred cCC-CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEc-CCCCC----------------CCc---cHHHHHHHHcC
Confidence 988 7999999999888888999999999999 9 899987 99995 211 24678999999
Q ss_pred CCEEEEeeeCCCCC-CCCCCCCCCChHHHHHHHHHHHHHHHHhCCc
Q 022892 234 VDGVFMEVHDDPLN-APVDGPTQWPLRNLEELLEELVAIAKVSKGK 278 (290)
Q Consensus 234 A~G~~IEkH~t~dk-a~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~ 278 (290)
|+ |||||||||| .++||++||+|+||++||+.+|+++.++|+.
T Consensus 219 A~--vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 219 AT--VFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp CC--EEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred CC--EEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 97 9999999999 5789999999999999999999999999984
No 14
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=100.00 E-value=3.9e-51 Score=386.59 Aligned_cols=228 Identities=18% Similarity=0.226 Sum_probs=208.7
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcC--CCEEeccccccCCCCCcccCCCCC----------hhHHHHH
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVG--LPLVFKSSFDKANRTSSKSFRGPG----------MVEGLKI 78 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G--~~~V~~~~~~k~~rts~~~~~g~~----------~~~~l~~ 78 (290)
+|.++|++||||||||||.+++++||++|++++++++ +.+|+|.+|+| |||+++ |+|++ +++||++
T Consensus 48 ~G~d~rllvIaGPCsie~~e~aleyA~~L~~~~~~l~d~l~ivmR~yfeK-PRTs~g-~kGl~~dP~ld~s~~i~~GL~i 125 (350)
T 1n8f_A 48 KGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEK-PRTTVG-WKGLINDPHMDNSFQINDGLRI 125 (350)
T ss_dssp TTSCCCEEEEEECSSCCCHHHHHHHHHHHHHHHHHTTTTEEEEEECCCCC-CCSSSS-CCCTTTCTTSSSCCCHHHHHHH
T ss_pred eCCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHhhccCeEEEEEecccc-CcCCcC-cCCCCCCCCccccccHHHHHHH
Confidence 4567899999999999999999999999999999996 88899999998 899999 99987 6899999
Q ss_pred HHHH---HHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH------
Q 022892 79 LEKV---KIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS------ 149 (290)
Q Consensus 79 L~~~---~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A------ 149 (290)
++++ ..++|+|++||++|+.+++++++++||++||||+++|+.+++.+|++++||+||||+++++++|.+|
T Consensus 126 lr~ll~~~~e~GlPv~TEvld~~~~~~vad~vd~~qIGAR~~esq~hr~~asg~~~PVg~Kngt~g~i~~~l~Ai~aa~~ 205 (350)
T 1n8f_A 126 ARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGA 205 (350)
T ss_dssp HHHHHHHHHHTTCCEEEECCCSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTCCSHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCceEEeecCcccHHHHhhcCcEEEECCccccCHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHHHhC
Confidence 9999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------------HHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHH-HHHhcCCC--EEEeCCCCCCCCCCCccCCCCcc
Q 022892 150 ------------AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLE-WMREANCP--VVADVTHSLQQPAGKKLDGGGVA 214 (290)
Q Consensus 150 ------------ve~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~-~lk~~~~p--V~~D~sHs~~~~~~~~~~~~~~~ 214 (290)
++++.+.||++++||+||++ +|+...+|++.++ .|++.|+| |++|+||++ ++..
T Consensus 206 ~h~fl~~~~~G~~~~v~t~GN~~~~lilRG~~-~~ny~~~di~~~~~~l~~~~lp~~VivD~SH~n----------s~k~ 274 (350)
T 1n8f_A 206 PHCFLSVTKWGHSAIVNTSGNGDCHIILRGGK-EPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHAN----------SSKQ 274 (350)
T ss_dssp CCEEEEECTTSBEEEEEECCCSCEEEEECCSS-SCCCSHHHHHHHHHHHHHTTCCCCEEEECSGGG----------TTTC
T ss_pred CceeeeeCCCCcEEEEECCCCCCEEEEECCCC-CCCCCHHHHHHHHHHHHHcCCCCeEEEECCCcc----------cCcc
Confidence 88899999999999999997 3444567999999 78889999 999999997 3455
Q ss_pred CCCCcccHHHHHHHHHHcCC---CEEEEeeeCCCCCCCCCCCCCCCh
Q 022892 215 SGGLRELIPCIARTAIAVGV---DGVFMEVHDDPLNAPVDGPTQWPL 258 (290)
Q Consensus 215 ~~g~~~~~~~~a~aAva~GA---~G~~IEkH~t~dka~~D~~~sl~p 258 (290)
++|+++++..++ ++++.|+ +|+|||+|+ +|++|++++
T Consensus 275 ~~~Q~~vv~~la-a~ia~G~~~i~GlmiEshl------~dG~Q~l~~ 314 (350)
T 1n8f_A 275 FKKQMDVCADVC-QQIAGGEKAIIGVMVESHL------VEGNQSLES 314 (350)
T ss_dssp GGGHHHHHHHHH-HHHHTTCCSEEEEEEEBCS------SSBBCCSSS
T ss_pred ccccHHHHHHHH-HHHHcCCCcccEEEEEecc------CCCCcCCCC
Confidence 678888999999 8899999 999999995 666666655
No 15
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=100.00 E-value=1.6e-48 Score=370.10 Aligned_cols=224 Identities=19% Similarity=0.264 Sum_probs=197.3
Q ss_pred hcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcC--CCEEeccccccCCCCCc------------ccCCCCChhHHH
Q 022892 11 LKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVG--LPLVFKSSFDKANRTSS------------KSFRGPGMVEGL 76 (290)
Q Consensus 11 i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G--~~~V~~~~~~k~~rts~------------~~~~g~~~~~~l 76 (290)
.|.+++++||||||||||.+++++||++|++++++++ +.+|+|.+|+| |||++ ++|+ +++||
T Consensus 63 ~g~d~rllvIaGPCSIed~e~aleyA~~Lk~~~~~~~d~l~iVmR~yfeK-PRTs~GwKGli~dP~ld~Sf~---g~~GL 138 (370)
T 1of8_A 63 TGKDDRVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEK-PRTTVGWKGLINDPDVNNTFN---INKGL 138 (370)
T ss_dssp TTSCCSEEEEEECSCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCC-CCSSSSCCCTTTCTTSSSCCC---HHHHH
T ss_pred cCCCCCeEEEEeCCcCCCHHHHHHHHHHHHHHHHhhccCeEEEEEecccc-ccCCccccccccCCCcCCCcC---HHHHH
Confidence 3567899999999999999999999999999999986 78899999998 89999 4555 37999
Q ss_pred HHHHHHH---HhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH----
Q 022892 77 KILEKVK---IAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS---- 149 (290)
Q Consensus 77 ~~L~~~~---~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A---- 149 (290)
++++++. +++|+|++||++|+.+++|+.|.+.|.+||||+++|+.+++.++++++||+||||+++++++|.+|
T Consensus 139 ~i~r~ll~~v~e~GlPvaTEvld~~~~qyv~Dllsw~aIGARt~esq~hre~Asgl~~PVg~Kngt~g~i~~~~~Ai~aa 218 (370)
T 1of8_A 139 QSARQLFVNLTNIGLPIGSEMLDTISPQYLADLVSFGAIGARTTESQLHRELASGLSFPVGFKNGTDGTLNVAVDACQAA 218 (370)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCSSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEeecCcccHHHHHHHHhhccccCcccccHHHHHHHhcCCCeEEEcCCCCCCHHHHHHHHHHH
Confidence 9988888 899999999999999999999999999999999999888777789999999999999999999999
Q ss_pred --------------HHHHHHcCCCcEEEEeecCC-C-CCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 150 --------------AEKVRLAGNPNVMVCERGTM-F-GYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 150 --------------ve~i~~~Gn~~i~L~~~gs~-~-~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
++++.+.||++++||+||++ | +|..+++|+ +...|+++|+||++|+||++
T Consensus 219 ~~~H~Fl~v~~~G~a~~v~t~GN~~~~lilRG~~~~~nY~~~~vd~-~~~~l~~~~~pVivD~SHan------------- 284 (370)
T 1of8_A 219 AHSHHFMGVTKHGVAAITTTKGNEHCFVILRGGKKGTNYDAKSVAE-AKAQLPAGSNGLMIDYSHGN------------- 284 (370)
T ss_dssp TSCCEEEEECTTSBEEEEEECCCSCEEEEECCCTTCCCCSHHHHHH-HHHHCCTTCCCEEEESSGGG-------------
T ss_pred hCCceeeeeCCCCcEEEEEcCCCCCEEEEECCCCCCCCCCHHHHHH-HHHHHHHhCCCEEEeCcccc-------------
Confidence 78899999999999999995 5 688888887 55678778999999999997
Q ss_pred cCCCCccc-----HHHHHHHHHHcCCC---EEEEeeeCCCCCCCCCCCCCCChHHH
Q 022892 214 ASGGLREL-----IPCIARTAIAVGVD---GVFMEVHDDPLNAPVDGPTQWPLRNL 261 (290)
Q Consensus 214 ~~~g~~~~-----~~~~a~aAva~GA~---G~~IEkH~t~dka~~D~~~sl~p~~l 261 (290)
|++++ +...++++++.|++ |+|||+|+. |++|++++++|
T Consensus 285 ---s~k~~~~Q~~V~~~~~a~ia~G~d~i~GlmiEsh~~------dG~Q~l~~~~~ 331 (370)
T 1of8_A 285 ---SNKDFRNQPKVNDVVCEQIANGENAITGVMIESNIN------EGNQGIPAEGK 331 (370)
T ss_dssp ---GTSCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSS------SBBCCC-----
T ss_pred ---hhhhhhhhhHHHHHHHHHHHcCCCcceEEEEEecCC------CCCCCCChhhh
Confidence 45555 78889999999999 999999985 67777766543
No 16
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=100.00 E-value=8.3e-40 Score=306.80 Aligned_cols=220 Identities=18% Similarity=0.198 Sum_probs=181.9
Q ss_pred cCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcC--CCEEeccccccCCCCCcccCCCCC----------hhHHHHHH
Q 022892 12 KAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVG--LPLVFKSSFDKANRTSSKSFRGPG----------MVEGLKIL 79 (290)
Q Consensus 12 ~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G--~~~V~~~~~~k~~rts~~~~~g~~----------~~~~l~~L 79 (290)
|.+++++||||||||||.+++++||++|+++.++.. ...|+|.+|+| |||+ ++|||++ +++||+++
T Consensus 46 G~d~rllVIaGPCSied~eq~leyA~~Lk~~~~~~~d~l~~vmR~y~~K-PRTs-~g~kGL~nDP~ld~s~~i~~GL~~~ 123 (346)
T 3tqk_A 46 GNDDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKDILIIMRVYFEK-PRTT-IGWKGFINDPDLDNSYNINKGLRLA 123 (346)
T ss_dssp TSSCSEEEEEECSSCSCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCC-CCSS-CSCCCTTTCTTSSSCCCHHHHHHHH
T ss_pred CCCCCEEEEEecCccCCHHHHHHHHHHHHHHHhhhcccceEEeeecccC-CCCC-cCccccccCCCCCCCccHHHHHHHH
Confidence 467899999999999999999999999999988776 34699999998 9999 8899874 46899997
Q ss_pred HHHH---HhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH-----
Q 022892 80 EKVK---IAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE----- 151 (290)
Q Consensus 80 ~~~~---~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave----- 151 (290)
+++. .++|+|++||++|+..+++++++++|.+||||++.|+.+++.++++++||+||||+++++++|.+|+.
T Consensus 124 R~ll~~~~e~GLpiatE~ld~~~~qyv~dlvs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gti~~ai~Ai~aa~~p 203 (346)
T 3tqk_A 124 RNLLSDLTNMGLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYP 203 (346)
T ss_dssp HHHHHHHHHTTCCEEEECCSSSGGGGTGGGCSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCCSHHHHHHHHHHTSC
T ss_pred HHHHHHHHhcCCCEEEEecCcCCHHHHHHHhheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCchHHHhhHHHHHhCC
Confidence 7644 99999999999999999999999999999999999988777788999999999999999999999987
Q ss_pred -------------HHHHcCCCcEEEEeecCC--CCCCCCCCCchhHHHHHhcCC--CEEEeCCCCCCCCCCCccCCCCcc
Q 022892 152 -------------KVRLAGNPNVMVCERGTM--FGYNDLIVDPRNLEWMREANC--PVVADVTHSLQQPAGKKLDGGGVA 214 (290)
Q Consensus 152 -------------~i~~~Gn~~i~L~~~gs~--~~y~~~~~dL~~i~~lk~~~~--pV~~D~sHs~~~~~~~~~~~~~~~ 214 (290)
++.+.||++.|+++||++ ++|..++++ .+...|++.++ +|++||||+|+.
T Consensus 204 H~Fl~~~~~G~~aiv~T~GN~~~HvILRGg~~gpNY~~~~v~-~a~~~l~k~~l~~~imVDcSH~NS~------------ 270 (346)
T 3tqk_A 204 HHFLSTTKSGSTAIFATKGNQNGHVILRGGASGPNFSKEHVD-DCIAKLKKADINTKVMIDCSHGNSQ------------ 270 (346)
T ss_dssp CEEEEECTTSCEEEEECCCCSCEEEEECCCTTCCCCSHHHHH-HHHHHHHHTTCCCCEEEESSHHHHT------------
T ss_pred ceEEeeCCCCcEEEEECCCCCCEEEEecCCCCCCCCCHHHHH-HHHHHHHhCCCCCeEEEecCccccc------------
Confidence 467889999999999985 357666666 45666766554 599999999721
Q ss_pred CCCCcccHHHHHH----HHH-HcCCCEEEEeeeCCCCCC
Q 022892 215 SGGLRELIPCIAR----TAI-AVGVDGVFMEVHDDPLNA 248 (290)
Q Consensus 215 ~~g~~~~~~~~a~----aAv-a~GA~G~~IEkH~t~dka 248 (290)
.++..++.++. +-. ...+.|+|||+|+...+.
T Consensus 271 --K~~~~Q~~V~~~v~~q~~~~~~I~GvMiES~l~~G~Q 307 (346)
T 3tqk_A 271 --KDHSKQISVLADICEQIKHSNDIFGVMIESNLVAGNQ 307 (346)
T ss_dssp --TCGGGHHHHHHHHHHHHHHCSSEEEEEEEBCSEEEEC
T ss_pred --ccHHHHHHHHHHHHHHHhcCCceeeeeHHhhhhccCC
Confidence 23333333332 211 356899999999865544
No 17
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=97.72 E-value=0.0034 Score=57.63 Aligned_cols=171 Identities=19% Similarity=0.209 Sum_probs=108.3
Q ss_pred CeEEEEccCCc----------cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH----HHHH
Q 022892 16 PFFLLAGPNVI----------ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK----ILEK 81 (290)
Q Consensus 16 ~~~iIAgpcsi----------en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~----~L~~ 81 (290)
++.|+...+.- .+.+..++.|+++++. ||+++--.... |.|++- ....++.++ .++.
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~----GAdiIDIGges----trPga~-~v~~~eE~~rv~pvi~~ 84 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINA----GATIIDVGGES----TRPGAA-EVSVEEELQRVIPVVEA 84 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHH----TCSEEEEESSC----CSTTCC-CCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHC----CCCEEEECCCc----CCCCCC-cCCHHHHHHHHHHHHHH
Confidence 56777776652 1357788888888885 99998776543 223311 111134443 3445
Q ss_pred HHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeC--CCCCC--------------HH
Q 022892 82 VKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA--------------SS 144 (290)
Q Consensus 82 ~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilst--G~~~t--------------l~ 144 (290)
+.++.++|+..+-++++.++...+ .++++-=-+.. ....+++.+++.+.||++.. |+..+ .+
T Consensus 85 l~~~~~~piSIDT~~~~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~ 163 (282)
T 1aj0_A 85 IAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNR 163 (282)
T ss_dssp HHHHCCCEEEEECCCHHHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHH
T ss_pred HHhhcCCeEEEeCCCHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHH
Confidence 556669999999999999988766 57776433333 44567888999999999954 44323 67
Q ss_pred HHHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCCCchhHHHH---HhcCCCEEEeCC
Q 022892 145 VMVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDPRNLEWM---REANCPVVADVT 197 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~-~i~L~~~gs~~~y~~~~~dL~~i~~l---k~~~~pV~~D~s 197 (290)
.....++.+.+.|-+ +=+++..|..|+- ...-|+..+..+ +++++|+.+-.|
T Consensus 164 ~l~~~i~~a~~~Gi~~~~IilDPg~gf~k-~~~~n~~ll~~l~~~~~~g~P~l~G~S 219 (282)
T 1aj0_A 164 YFIEQIARCEQAGIAKEKLLLDPGFGFGK-NLSHNYSLLARLAEFHHFNLPLLVGMS 219 (282)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCTTSSC-CHHHHHHHHHTGGGGGGGCSCBEECCT
T ss_pred HHHHHHHHHHHcCCChhhEEEeCCCCccc-CHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 777788888888855 2466678765422 111233333333 336899877333
No 18
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=97.68 E-value=0.0028 Score=58.12 Aligned_cols=158 Identities=9% Similarity=0.047 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH----HHHHHHhcCCcEEEeecCcccHHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI----LEKVKIAYDIPIVTDVHETVQCEEV 103 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~----L~~~~~~~Gi~~~s~~~d~~~~~~l 103 (290)
+.+..++.|+++++ .||+++--.... |.|++- ....++.++. ++.+.++ ++++..+-++++.++..
T Consensus 27 ~~~~a~~~a~~~v~----~GAdiIDIGges----trpga~-~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~~~~va~aA 96 (280)
T 1eye_A 27 DLDDAVKHGLAMAA----AGAGIVDVGGES----SRPGAT-RVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAA 96 (280)
T ss_dssp SHHHHHHHHHHHHH----TTCSEEEEECC-------------------HHHHHHHHHHHHHT-TCCEEEECSCHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEECCcc----CCCCCC-CCCHHHHHHHHHHHHHHhhcC-CCEEEEeCCCHHHHHHH
Confidence 57888999999888 599998776433 223211 0111233333 3444443 99999999999999887
Q ss_pred hh-hccee-cccCCccCCHHHHHHHHhcCCeEEEeC--CCCCC---------------HHHHHHHHHHHHHcCCC-cEEE
Q 022892 104 GK-VADII-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA---------------SSVMVNSAEKVRLAGNP-NVMV 163 (290)
Q Consensus 104 ~~-~~d~~-kIgs~~~~n~~lL~~~a~~~~PVilst--G~~~t---------------l~e~~~Ave~i~~~Gn~-~i~L 163 (290)
.+ .++++ -|.+.. ....+++.+++.+.||++.. |+..+ .+.....++.+.+.|-+ +=++
T Consensus 97 l~aGa~iINdvsg~~-~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Ii 175 (280)
T 1eye_A 97 LQNGAQMVNDVSGGR-ADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLV 175 (280)
T ss_dssp HHTTCCEEEETTTTS-SCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHcCCCEEEECCCCC-CCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 66 57766 333332 23467888999999999954 33212 56666778888888855 2467
Q ss_pred EeecCCCCCCCCCCCc---hhHHHHHhcCCCEEEeCC
Q 022892 164 CERGTMFGYNDLIVDP---RNLEWMREANCPVVADVT 197 (290)
Q Consensus 164 ~~~gs~~~y~~~~~dL---~~i~~lk~~~~pV~~D~s 197 (290)
+..|..|.-.. .-|+ +.+..++++++|+.+-.|
T Consensus 176 lDPg~Gf~k~~-~~n~~ll~~l~~~~~~g~Pvl~G~S 211 (280)
T 1eye_A 176 LDPGLGFAKTA-QHNWAILHALPELVATGIPVLVGAS 211 (280)
T ss_dssp EECCTTSSCCH-HHHHHHHHTHHHHHTTSSCBEECCT
T ss_pred EECCCCcccCH-HHHHHHHHHHHHhhcCCCCEEEEec
Confidence 78887543211 1233 445555557899877333
No 19
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.40 E-value=0.0038 Score=54.25 Aligned_cols=172 Identities=17% Similarity=0.136 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
..+.|+.+.+ .|++++....... . + .+....+..+++++++.++|++. .+.++++++.+.+ .+|
T Consensus 35 ~~~~a~~~~~----~G~d~i~v~~~~~---~----~--~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad 101 (253)
T 1h5y_A 35 PVEMAVRYEE----EGADEIAILDITA---A----P--EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGAD 101 (253)
T ss_dssp HHHHHHHHHH----TTCSCEEEEECCC---C----T--TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHH----cCCCEEEEEeCCc---c----c--cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 4566666654 6999776543221 0 1 12234577888899999999986 3566677776665 699
Q ss_pred eecccCCccCCHHHHHHHH-hcCCe-E-------------EEeC--CCC---CCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 109 IIQIPAFLCRQTDLLVAAA-KTGKI-I-------------NIKK--GQF---CASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a-~~~~P-V-------------ilst--G~~---~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
.+-|++..+.+..++..+. ..+.+ + .++. +.. .+..|+. +.+...|-.. ++++...
T Consensus 102 ~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~---~~~~~~G~d~-i~~~~~~ 177 (253)
T 1h5y_A 102 KVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWA---KEVEELGAGE-ILLTSID 177 (253)
T ss_dssp EEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHH---HHHHHHTCSE-EEEEETT
T ss_pred EEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHH---HHHHhCCCCE-EEEeccc
Confidence 9999998888777666543 33421 1 1221 210 1344443 2334456544 4444332
Q ss_pred CCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 169 MFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 169 ~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
..+. ....++..+..+++ .++||+.+..-+ . ..-...+...||+|+++=+.+
T Consensus 178 ~~g~-~~~~~~~~i~~l~~~~~~pvia~GGi~--------------------~--~~~~~~~~~~Ga~~v~vgsal 230 (253)
T 1h5y_A 178 RDGT-GLGYDVELIRRVADSVRIPVIASGGAG--------------------R--VEHFYEAAAAGADAVLAASLF 230 (253)
T ss_dssp TTTT-CSCCCHHHHHHHHHHCSSCEEEESCCC--------------------S--HHHHHHHHHTTCSEEEESHHH
T ss_pred CCCC-cCcCCHHHHHHHHHhcCCCEEEeCCCC--------------------C--HHHHHHHHHcCCcHHHHHHHH
Confidence 1111 12246778888887 789998853221 1 122233457899999998876
No 20
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.35 E-value=0.02 Score=49.12 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=102.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE---eecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT---DVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s---~~~d~~~~~~l~ 104 (290)
+.+...+.++++.+ .|+++|-...-+ ...++.+++++++++++++. ++.+++.++.+.
T Consensus 17 d~~~~~~~~~~~~~----~G~~~i~l~~~~---------------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~ 77 (212)
T 2v82_A 17 TPDEALAHVGAVID----AGFDAVEIPLNS---------------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALA 77 (212)
T ss_dssp CHHHHHHHHHHHHH----HTCCEEEEETTS---------------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEEeCCC---------------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHH
Confidence 66677777777766 599887542111 12356778888888987665 566777888877
Q ss_pred h-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHH
Q 022892 105 K-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLE 183 (290)
Q Consensus 105 ~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~ 183 (290)
+ .+|++-+|+ .+.++++.+.+.+.++++. .. |++|+..+.+ .|-+.+. + | +.....+..+.
T Consensus 78 ~~Gad~V~~~~---~~~~~~~~~~~~g~~~~~g--~~-t~~e~~~a~~----~G~d~v~-v-----~--~t~~~g~~~~~ 139 (212)
T 2v82_A 78 RMGCQLIVTPN---IHSEVIRRAVGYGMTVCPG--CA-TATEAFTALE----AGAQALK-I-----F--PSSAFGPQYIK 139 (212)
T ss_dssp HTTCCEEECSS---CCHHHHHHHHHTTCEEECE--EC-SHHHHHHHHH----TTCSEEE-E-----T--THHHHCHHHHH
T ss_pred HcCCCEEEeCC---CCHHHHHHHHHcCCCEEee--cC-CHHHHHHHHH----CCCCEEE-E-----e--cCCCCCHHHHH
Confidence 7 689887776 4567888887889998876 34 8998876643 4654443 3 1 11123456677
Q ss_pred HHHh-cC--CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCC
Q 022892 184 WMRE-AN--CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 245 (290)
Q Consensus 184 ~lk~-~~--~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~ 245 (290)
.+++ .. +||+.+.-=+ ..-.....++||+|+++=+-+..
T Consensus 140 ~l~~~~~~~ipvia~GGI~-----------------------~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 140 ALKAVLPSDIAVFAVGGVT-----------------------PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHHTTSCTTCEEEEESSCC-----------------------TTTHHHHHHHTCSEEEECTTTCC
T ss_pred HHHHhccCCCeEEEeCCCC-----------------------HHHHHHHHHcCCCEEEEChHHhC
Confidence 7776 54 8887742111 01123445679999998777643
No 21
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.25 E-value=0.031 Score=53.00 Aligned_cols=164 Identities=13% Similarity=0.027 Sum_probs=100.8
Q ss_pred hcCCcEEEeecCc----ccH-HH------Hhhhcceecc--------cCCccCCHHHH----HHHHh--------cCCeE
Q 022892 85 AYDIPIVTDVHET----VQC-EE------VGKVADIIQI--------PAFLCRQTDLL----VAAAK--------TGKII 133 (290)
Q Consensus 85 ~~Gi~~~s~~~d~----~~~-~~------l~~~~d~~kI--------gs~~~~n~~lL----~~~a~--------~~~PV 133 (290)
..+.|+...+.-. +.+ +| +.+++|++-| |.+.+++.+.+ +++.+ ..+||
T Consensus 144 ~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv 223 (367)
T 3zwt_A 144 EDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAV 223 (367)
T ss_dssp HTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEE
T ss_pred cCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceE
Confidence 3589999988652 122 22 2223555533 34456666544 43321 67999
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-------------CCC---CCCCchhHHHHHh-c--CCCEEE
Q 022892 134 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-------------YND---LIVDPRNLEWMRE-A--NCPVVA 194 (290)
Q Consensus 134 ilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~-------------y~~---~~~dL~~i~~lk~-~--~~pV~~ 194 (290)
++|-....+.+++...++.+.+.|-+-|++.-++.... +.- ..+.++.+..+++ . ++||+.
T Consensus 224 ~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~ 303 (367)
T 3zwt_A 224 LVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG 303 (367)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE
Confidence 99999888888999999999999987666554432210 000 0123567777877 6 799987
Q ss_pred eCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 195 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 195 D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
+..=. . ..-+..++.+||++++|=+-+-. + .|.-++++.+.+++.-..
T Consensus 304 ~GGI~-----------------s-----~~da~~~l~~GAd~V~vgra~l~-----~-----gP~~~~~i~~~l~~~m~~ 351 (367)
T 3zwt_A 304 VGGVS-----------------S-----GQDALEKIRAGASLVQLYTALTF-----W-----GPPVVGKVKRELEALLKE 351 (367)
T ss_dssp ESSCC-----------------S-----HHHHHHHHHHTCSEEEESHHHHH-----H-----CTHHHHHHHHHHHHHHHH
T ss_pred ECCCC-----------------C-----HHHHHHHHHcCCCEEEECHHHHh-----c-----CcHHHHHHHHHHHHHHHH
Confidence 43211 1 34466677889999988765411 1 356777787777765555
Q ss_pred hCCccc
Q 022892 275 SKGKQR 280 (290)
Q Consensus 275 lg~~~~ 280 (290)
.|-+++
T Consensus 352 ~G~~~i 357 (367)
T 3zwt_A 352 QGFGGV 357 (367)
T ss_dssp TTCSSH
T ss_pred cCCCCH
Confidence 554443
No 22
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.19 E-value=0.045 Score=49.77 Aligned_cols=188 Identities=16% Similarity=0.150 Sum_probs=115.5
Q ss_pred hHHhhhcCCCCeEEEEccCCc-------cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH
Q 022892 6 ALFNQLKAAEPFFLLAGPNVI-------ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78 (290)
Q Consensus 6 ~~~~~i~~~~~~~iIAgpcsi-------en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~ 78 (290)
+++..+... .+-||||.--. ...-...++|+... +.|+.++.--+-. ..| ...+..
T Consensus 42 ~f~~al~~~-~~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~----~~GA~~isvltd~-------~~f-----~Gs~~~ 104 (272)
T 3qja_A 42 DVMAALREP-GIGVIAEVKRASPSAGALATIADPAKLAQAYQ----DGGARIVSVVTEQ-------RRF-----QGSLDD 104 (272)
T ss_dssp CHHHHHTSS-SCEEEEEEC-------------CHHHHHHHHH----HTTCSEEEEECCG-------GGH-----HHHHHH
T ss_pred CHHHHHhcC-CCeEEEEEecCCCCCCccCCCCCHHHHHHHHH----HcCCCEEEEecCh-------hhc-----CCCHHH
Confidence 455555433 37899985422 11112345555544 4799988643222 112 234778
Q ss_pred HHHHHHhcCCcEEEee--cCcccHHHHhh-hcceecccCCccCCHH---HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 79 LEKVKIAYDIPIVTDV--HETVQCEEVGK-VADIIQIPAFLCRQTD---LLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~--~d~~~~~~l~~-~~d~~kIgs~~~~n~~---lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
|+++++..++|++.-= .|+.+++.... .+|.+-++...+.+.. +++.+...|+.+++... |.+|+..|.+
T Consensus 105 l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~---t~ee~~~A~~- 180 (272)
T 3qja_A 105 LDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVH---TEQEADRALK- 180 (272)
T ss_dssp HHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHH-
T ss_pred HHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcC---CHHHHHHHHH-
Confidence 8888888999998743 34445676666 6999999877776543 45556678999998763 8999888764
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 022892 153 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 229 (290)
Q Consensus 153 i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aA 229 (290)
.|-+-|.+-.+. .....+|+..+..|.+ . ++||+.-+- + .. +.-....
T Consensus 181 ---~Gad~IGv~~r~----l~~~~~dl~~~~~l~~~v~~~~pvVaegG--I---------------~t-----~edv~~l 231 (272)
T 3qja_A 181 ---AGAKVIGVNARD----LMTLDVDRDCFARIAPGLPSSVIRIAESG--V---------------RG-----TADLLAY 231 (272)
T ss_dssp ---HTCSEEEEESBC----TTTCCBCTTHHHHHGGGSCTTSEEEEESC--C---------------CS-----HHHHHHH
T ss_pred ---CCCCEEEECCCc----ccccccCHHHHHHHHHhCcccCEEEEECC--C---------------CC-----HHHHHHH
Confidence 365544443221 1123467777777876 4 688866211 1 01 3334556
Q ss_pred HHcCCCEEEEeeeC
Q 022892 230 IAVGVDGVFMEVHD 243 (290)
Q Consensus 230 va~GA~G~~IEkH~ 243 (290)
..+||+|+++=+.+
T Consensus 232 ~~~GadgvlVGsal 245 (272)
T 3qja_A 232 AGAGADAVLVGEGL 245 (272)
T ss_dssp HHTTCSEEEECHHH
T ss_pred HHcCCCEEEEcHHH
Confidence 78899999998876
No 23
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.15 E-value=0.013 Score=51.42 Aligned_cols=185 Identities=16% Similarity=0.134 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hc
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VA 107 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~ 107 (290)
...++|+.+.+ .|++++-.. ++ .. .+ .+....+..+++++++.++|++. -+.++++++.+.+ .+
T Consensus 32 d~~~~a~~~~~----~Gad~i~v~--d~-~~----~~--~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Ga 98 (252)
T 1ka9_F 32 DPVEAARAYDE----AGADELVFL--DI-SA----TH--EERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGA 98 (252)
T ss_dssp CHHHHHHHHHH----HTCSCEEEE--EC-CS----ST--TCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHH----cCCCEEEEE--cC-Cc----cc--cCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCC
Confidence 45777877766 599976543 21 11 01 12234577889999999999997 4555677777666 69
Q ss_pred ceecccCCccCCHHHHHHHHh-cC---CeEEEeC----C--------------CCCCHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 108 DIIQIPAFLCRQTDLLVAAAK-TG---KIINIKK----G--------------QFCASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 108 d~~kIgs~~~~n~~lL~~~a~-~~---~PVilst----G--------------~~~tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
|.+-+|+..+.+.++++++.+ .+ ..+.++. | .. +.+.++.+ ...|-..+++..
T Consensus 99 d~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~-~~e~~~~~----~~~G~~~i~~~~ 173 (252)
T 1ka9_F 99 DKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLH-AVEWAVKG----VELGAGEILLTS 173 (252)
T ss_dssp SEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEE-HHHHHHHH----HHHTCCEEEEEE
T ss_pred CEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCc-HHHHHHHH----HHcCCCEEEEec
Confidence 999999999988877766543 23 2345543 1 11 23333333 334655554443
Q ss_pred ecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 166 RGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 166 ~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
++ .-+.. .-.|+..+..+++ .++||+....-+ . +.-+......||+|+++=+-+
T Consensus 174 ~~-~~g~~-~g~~~~~i~~l~~~~~ipvia~GGI~-----------------~-----~~d~~~~~~~Gadgv~vgsal- 228 (252)
T 1ka9_F 174 MD-RDGTK-EGYDLRLTRMVAEAVGVPVIASGGAG-----------------R-----MEHFLEAFQAGAEAALAASVF- 228 (252)
T ss_dssp TT-TTTTC-SCCCHHHHHHHHHHCSSCEEEESCCC-----------------S-----HHHHHHHHHTTCSEEEESHHH-
T ss_pred cc-CCCCc-CCCCHHHHHHHHHHcCCCEEEeCCCC-----------------C-----HHHHHHHHHCCCHHHHHHHHH-
Confidence 22 21111 2247888888888 799998732221 1 222333456899999998766
Q ss_pred CCCCCCCCCCCCChHHHHHHH
Q 022892 245 PLNAPVDGPTQWPLRNLEELL 265 (290)
Q Consensus 245 ~dka~~D~~~sl~p~~l~~lv 265 (290)
+...+++.++.+.+
T Consensus 229 -------~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 229 -------HFGEIPIPKLKRYL 242 (252)
T ss_dssp -------HTTSSCHHHHHHHH
T ss_pred -------HcCCCCHHHHHHHH
Confidence 33345666665543
No 24
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=97.10 E-value=0.036 Score=51.16 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=109.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH----HHHHHHHhcCCcEEEeecCcccHHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK----ILEKVKIAYDIPIVTDVHETVQCEEV 103 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~----~L~~~~~~~Gi~~~s~~~d~~~~~~l 103 (290)
+.+..++.|+++++. ||+++=-.... |.|++ .....++.++ .++.+.++ ++++.-+-++++.++..
T Consensus 50 ~~~~a~~~a~~~v~~----GAdIIDIGgeS----TrPga-~~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~~~~Va~aA 119 (294)
T 2dqw_A 50 DPERALERAREMVAE----GADILDLGAES----TRPGA-APVPVEEEKRRLLPVLEAVLSL-GVPVSVDTRKPEVAEEA 119 (294)
T ss_dssp ---CCHHHHHHHHHH----TCSEEEEECC----------------CCHHHHHHHHHHHHHTT-CSCEEEECSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHC----CCCEEEECCCc----CCCCC-CCCCHHHHHHHHHHHHHHHHhC-CCeEEEECCCHHHHHHH
Confidence 345577888888875 99998766543 22221 1111122333 34444444 99999999999999887
Q ss_pred hh-hccee-cccCCccCCHHHHHHHHhcCCeEEEeC---CCCCC--------------HHHHHHHHHHHHHcCCCcEEEE
Q 022892 104 GK-VADII-QIPAFLCRQTDLLVAAAKTGKIINIKK---GQFCA--------------SSVMVNSAEKVRLAGNPNVMVC 164 (290)
Q Consensus 104 ~~-~~d~~-kIgs~~~~n~~lL~~~a~~~~PVilst---G~~~t--------------l~e~~~Ave~i~~~Gn~~i~L~ 164 (290)
.+ ..+++ -|.+. ....++..+++.+.||++.. |+..| .+...+.++.+.+.|-++ +++
T Consensus 120 l~aGa~iINdVsg~--~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~-Iil 196 (294)
T 2dqw_A 120 LKLGAHLLNDVTGL--RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQ-VVL 196 (294)
T ss_dssp HHHTCSEEECSSCS--CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSC-EEE
T ss_pred HHhCCCEEEECCCC--CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCc-EEE
Confidence 66 57766 34433 56688898999999999965 55434 445666677888889774 666
Q ss_pred eecCCCCCCCCCCCch---hHHHHHhcCCCEEEeCCCC------CCCCCCCccCCCCccCCCCcccHH-HHHHHHHHcCC
Q 022892 165 ERGTMFGYNDLIVDPR---NLEWMREANCPVVADVTHS------LQQPAGKKLDGGGVASGGLRELIP-CIARTAIAVGV 234 (290)
Q Consensus 165 ~~gs~~~y~~~~~dL~---~i~~lk~~~~pV~~D~sHs------~~~~~~~~~~~~~~~~~g~~~~~~-~~a~aAva~GA 234 (290)
..|..|+-. ..-|+. .+..++++++|+.+-.|.- .+.|. ...|.... ..+..|+..|+
T Consensus 197 DPG~Gf~kt-~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~-----------~~~R~~~t~a~~~~a~~~Ga 264 (294)
T 2dqw_A 197 DPGFGFGKL-LEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVED-----------PAQRVHGSVAAHLFAVMKGV 264 (294)
T ss_dssp ECCTTSSCC-HHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCS-----------GGGCHHHHHHHHHHHHHTTC
T ss_pred cCCCCcccC-HHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCc-----------hhhhHHHHHHHHHHHHHcCC
Confidence 787654321 112333 3444444689987633321 00000 01222222 33445678899
Q ss_pred CEEEEeee
Q 022892 235 DGVFMEVH 242 (290)
Q Consensus 235 ~G~~IEkH 242 (290)
+ ++=.|
T Consensus 265 ~--IvRvH 270 (294)
T 2dqw_A 265 R--LLRVH 270 (294)
T ss_dssp C--EEEES
T ss_pred c--EEEcC
Confidence 7 89899
No 25
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=97.09 E-value=0.043 Score=51.18 Aligned_cols=170 Identities=16% Similarity=0.133 Sum_probs=99.9
Q ss_pred CCeEEEEccCCc----------cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH----HH
Q 022892 15 EPFFLLAGPNVI----------ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI----LE 80 (290)
Q Consensus 15 ~~~~iIAgpcsi----------en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~----L~ 80 (290)
+++.|+...++- -+.+..++.|+++++ .||++|=-.... .| |+ .....++.++. ++
T Consensus 40 ~~~~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~----~GAdIIDIGgeS--Tr--PG--~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 40 DRALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVA----DGADVIDVGGVK--AG--PG--ERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SSCEEEEEEC--------------CHHHHHHHHHHHH----TTCSEEEEC----------------CHHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHH----CCCCEEEECCCc--CC--CC--CCCCHHHHHHHHHHHHH
Confidence 356777766651 134567778888877 599998766443 12 22 11222344443 45
Q ss_pred HHHHhc-CCcEEEeecCcccHHHHhh-hccee-cccCCccCCHHHHHHHHhcCCeEEEeC--CC-CCCH-----------
Q 022892 81 KVKIAY-DIPIVTDVHETVQCEEVGK-VADII-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQ-FCAS----------- 143 (290)
Q Consensus 81 ~~~~~~-Gi~~~s~~~d~~~~~~l~~-~~d~~-kIgs~~~~n~~lL~~~a~~~~PVilst--G~-~~tl----------- 143 (290)
.+.++. ++++.-+-++++.++...+ ..+++ -|.+.. ...++..+++.+.||++.. |+ ..|+
T Consensus 110 ~l~~~~~~vpISIDT~~~~VaeaAl~aGa~iINDVsg~~--d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~ 187 (318)
T 2vp8_A 110 WLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGGV--DPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTR 187 (318)
T ss_dssp HHHHHSTTCEEEEECSCHHHHHHHHHHTCCEEEETTSSS--STTHHHHHHHHTCEEEEECC-------------CCSCHH
T ss_pred HHHhhCCCCeEEEeCCCHHHHHHHHHhCCCEEEECCCCC--chHHHHHHHHhCCCEEEECCCCCCccccccccccccccc
Confidence 556666 9999999999999988766 56765 444443 4577888999999999966 43 2121
Q ss_pred -------HHHHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCCCc---hhHHHHHhcCCCEEEeCC
Q 022892 144 -------SVMVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDP---RNLEWMREANCPVVADVT 197 (290)
Q Consensus 144 -------~e~~~Ave~i~~~Gn~-~i~L~~~gs~~~y~~~~~dL---~~i~~lk~~~~pV~~D~s 197 (290)
++..+.++.+.+.|-+ +=+++..|..|.-. ..-|+ +.+..++++++|+.+-.|
T Consensus 188 dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt-~~~nl~ll~~l~~l~~lg~PvL~G~S 251 (318)
T 2vp8_A 188 GVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKN-TFHGLLLLRHVADLVMTGWPVLMALS 251 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTT-SHHHHHHHHTHHHHHTTSSCBEECCC
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccC-HHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3344456677788854 34677888765321 11233 444445557899877333
No 26
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.08 E-value=0.077 Score=45.61 Aligned_cols=196 Identities=15% Similarity=0.088 Sum_probs=109.3
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCC-hhHHHHHHHHHHHhcCCcEEEee
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPG-MVEGLKILEKVKIAYDIPIVTDV 94 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~-~~~~l~~L~~~~~~~Gi~~~s~~ 94 (290)
+++.|..+-...+. ..+.++++.+ .|+++|-......++ ..++ +.+..+.+++.++.+|++++..
T Consensus 19 ~i~~It~~~~~~~~--~~~~~~~~~~----~G~~~i~l~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~v~v~v~- 84 (227)
T 2tps_A 19 SVYFIMGSNNTKAD--PVTVVQKALK----GGATLYQFREKGGDA-------LTGEARIKFAEKAQAACREAGVPFIVN- 84 (227)
T ss_dssp TEEEEECGGGCSSC--HHHHHHHHHH----HTCSEEEECCCSTTC-------CCHHHHHHHHHHHHHHHHHHTCCEEEE-
T ss_pred CEEEEECCccccch--HHHHHHHHHH----CCCCEEEEecCCCCH-------hHHHHHHHHHHHHHHHHHHcCCeEEEc-
Confidence 57777754321122 5666766666 599988654332111 1110 0345666778888899999885
Q ss_pred cCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE---eecCC
Q 022892 95 HETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTG-KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC---ERGTM 169 (290)
Q Consensus 95 ~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~-~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~---~~gs~ 169 (290)
+.++.+.+ .+|.+.+|..+.. .. +.....+ +.+.++. . |++|+..+. ..|-+.+.+. ..++.
T Consensus 85 ---~~~~~a~~~gad~v~l~~~~~~-~~--~~~~~~g~~~~~~s~--~-t~~e~~~a~----~~g~d~v~~~~v~~t~~~ 151 (227)
T 2tps_A 85 ---DDVELALNLKADGIHIGQEDAN-AK--EVRAAIGDMILGVSA--H-TMSEVKQAE----EDGADYVGLGPIYPTETK 151 (227)
T ss_dssp ---SCHHHHHHHTCSEEEECTTSSC-HH--HHHHHHTTSEEEEEE--C-SHHHHHHHH----HHTCSEEEECCSSCCCSS
T ss_pred ---CHHHHHHHcCCCEEEECCCccC-HH--HHHHhcCCcEEEEec--C-CHHHHHHHH----hCCCCEEEECCCcCCCCC
Confidence 45666666 6999999887653 21 1112234 4455543 3 788865543 3465444431 22221
Q ss_pred CCCCCCCCCchhHHHHHh-cC-CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FGYNDLIVDPRNLEWMRE-AN-CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~~-~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
.++ ....++..+..+++ .+ +||+...-=+ ..+ ...+..+||+|+.+=+-+.-.
T Consensus 152 ~~~-~~~~~~~~l~~~~~~~~~~pvia~GGI~---------------~~n--------v~~~~~~Ga~gv~vgs~i~~~- 206 (227)
T 2tps_A 152 KDT-RAVQGVSLIEAVRRQGISIPIVGIGGIT---------------IDN--------AAPVIQAGADGVSMISAISQA- 206 (227)
T ss_dssp SSC-CCCCTTHHHHHHHHTTCCCCEEEESSCC---------------TTT--------SHHHHHTTCSEEEESHHHHTS-
T ss_pred CCC-CCccCHHHHHHHHHhCCCCCEEEEcCCC---------------HHH--------HHHHHHcCCCEEEEhHHhhcC-
Confidence 111 12346777888877 66 9997732111 011 223456799999987766321
Q ss_pred CCCCCCCCCCh-HHHHHHHHHHHHH
Q 022892 248 APVDGPTQWPL-RNLEELLEELVAI 271 (290)
Q Consensus 248 a~~D~~~sl~p-~~l~~lv~~ir~~ 271 (290)
-+| +.++++++.++..
T Consensus 207 --------~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 207 --------EDPESAARKFREEIQTY 223 (227)
T ss_dssp --------SCHHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhc
Confidence 135 5666776666554
No 27
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.04 E-value=0.0049 Score=54.14 Aligned_cols=170 Identities=12% Similarity=0.076 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d 108 (290)
..+.|+.+.+ +|++.+-....+. .|.+.. .. ..+++++++.++|+... +.++++++.+.+ .+|
T Consensus 34 ~~~~a~~~~~----~Gad~i~v~~~d~-------~~~~~~--~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad 99 (244)
T 1vzw_A 34 PLEAALAWQR----SGAEWLHLVDLDA-------AFGTGD--NR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCT 99 (244)
T ss_dssp HHHHHHHHHH----TTCSEEEEEEHHH-------HHTSCC--CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----cCCCEEEEecCch-------hhcCCC--hH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCC
Confidence 4666766655 6999876543331 122221 22 77888889999999884 567777887766 699
Q ss_pred eecccCCccCCHHHHHHHHh-cCC--eEEEeCC--C---------CCCHHHHHHHHHHHHHcCCCcEEEEeecCC-CCCC
Q 022892 109 IIQIPAFLCRQTDLLVAAAK-TGK--IINIKKG--Q---------FCASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYN 173 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~-~~~--PVilstG--~---------~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~-~~y~ 173 (290)
.+-+|+..+.|.+++.++.+ .+. -+.++.. . +.+..|+ ++.+...|-..+.+ +.... ..+.
T Consensus 100 ~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~---~~~~~~~G~~~i~~-~~~~~~~~~~ 175 (244)
T 1vzw_A 100 RVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYET---LDRLNKEGCARYVV-TDIAKDGTLQ 175 (244)
T ss_dssp EEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHH---HHHHHHTTCCCEEE-EEC-------
T ss_pred EEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHH---HHHHHhCCCCEEEE-eccCcccccC
Confidence 99999999998876666433 222 2223321 0 0034443 22334456655544 43322 1121
Q ss_pred CCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc---CCCEEEEeeeC
Q 022892 174 DLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV---GVDGVFMEVHD 243 (290)
Q Consensus 174 ~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~---GA~G~~IEkH~ 243 (290)
-.|+..+..+++ .++||+.+..=.. +.-+..+.++ ||+|+++=+-+
T Consensus 176 --g~~~~~~~~i~~~~~ipvia~GGI~~----------------------~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 176 --GPNLELLKNVCAATDRPVVASGGVSS----------------------LDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp --CCCHHHHHHHHHTCSSCEEEESCCCS----------------------HHHHHHHHTTGGGTEEEEEECHHH
T ss_pred --CCCHHHHHHHHHhcCCCEEEECCCCC----------------------HHHHHHHHhhccCCCceeeeeHHH
Confidence 247888888888 7899988543321 2334456677 99999998765
No 28
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.03 E-value=0.046 Score=46.49 Aligned_cols=192 Identities=16% Similarity=0.127 Sum_probs=108.2
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH 95 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~ 95 (290)
+++.|..+- . . ...+.++++.+ .|+++|-+.... .+ .. ...+.++.+++.+...|++++..
T Consensus 16 ~l~~It~~~-~-~--~~~~~~~~~~~----~G~~~i~l~~~~----~~---~~--~~~~~~~~l~~~~~~~~v~v~v~-- 76 (215)
T 1xi3_A 16 KLYVITDRR-L-K--PEVESVREALE----GGATAIQMRIKN----AP---TR--EMYEIGKTLRQLTREYDALFFVD-- 76 (215)
T ss_dssp SEEEECCTT-T-S--CHHHHHHHHHH----TTCSEEEECCCS----CC---HH--HHHHHHHHHHHHHHHTTCEEEEE--
T ss_pred CEEEEECCc-h-h--hHHHHHHHHHH----CCCCEEEECCCC----CC---HH--HHHHHHHHHHHHHHHcCCeEEEc--
Confidence 467776542 1 1 34555665555 699988543211 01 10 01244566778888899988874
Q ss_pred CcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CC-CC
Q 022892 96 ETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MF-GY 172 (290)
Q Consensus 96 d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~~-~y 172 (290)
+.++.+.+ .+|.+.+++.+.. ...++.+. .++.+.++. . |++|+..+. ..|-+ .+++.... .. ..
T Consensus 77 --~~~~~a~~~gad~v~l~~~~~~-~~~~~~~~-~~~~~~v~~--~-t~~e~~~~~----~~g~d-~i~~~~~~~~~~~~ 144 (215)
T 1xi3_A 77 --DRVDVALAVDADGVQLGPEDMP-IEVAKEIA-PNLIIGASV--Y-SLEEALEAE----KKGAD-YLGAGSVFPTKTKE 144 (215)
T ss_dssp --SCHHHHHHHTCSEEEECTTSCC-HHHHHHHC-TTSEEEEEE--S-SHHHHHHHH----HHTCS-EEEEECSSCC----
T ss_pred --ChHHHHHHcCCCEEEECCccCC-HHHHHHhC-CCCEEEEec--C-CHHHHHHHH----hcCCC-EEEEcCCccCCCCC
Confidence 56676666 6999999987654 33444443 456666665 3 788866543 34654 44443211 00 01
Q ss_pred CCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCC
Q 022892 173 NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 251 (290)
Q Consensus 173 ~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D 251 (290)
.....++..+..+++ .++||+...-=+ . .. ...+...||+|+++=+-+.-.+
T Consensus 145 ~~~~~~~~~l~~l~~~~~~pvia~GGI~-------------------~---~n-v~~~~~~Ga~gv~vgs~i~~~~---- 197 (215)
T 1xi3_A 145 DARVIGLEGLRKIVESVKIPVVAIGGIN-------------------K---DN-AREVLKTGVDGIAVISAVMGAE---- 197 (215)
T ss_dssp CCCCCHHHHHHHHHHHCSSCEEEESSCC-------------------T---TT-HHHHHTTTCSEEEESHHHHTSS----
T ss_pred CCCCcCHHHHHHHHHhCCCCEEEECCcC-------------------H---HH-HHHHHHcCCCEEEEhHHHhCCC----
Confidence 112356677777777 789998732111 0 11 2234668999999877663211
Q ss_pred CCCCCCh-HHHHHHHHHHHH
Q 022892 252 GPTQWPL-RNLEELLEELVA 270 (290)
Q Consensus 252 ~~~sl~p-~~l~~lv~~ir~ 270 (290)
+| +.+++|++.++.
T Consensus 198 -----d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 198 -----DVRKATEELRKIVEE 212 (215)
T ss_dssp -----SHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHhh
Confidence 35 356666665554
No 29
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.99 E-value=0.012 Score=51.84 Aligned_cols=173 Identities=17% Similarity=0.158 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hc
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VA 107 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~ 107 (290)
...++|+.+.+ +|++.+-...... .+. +....++.+++++++.++|+... +.++++++.+.+ .+
T Consensus 31 d~~~~a~~~~~----~Gad~i~v~d~~~-------~~~--~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Ga 97 (253)
T 1thf_D 31 DPVELGKFYSE----IGIDELVFLDITA-------SVE--KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGA 97 (253)
T ss_dssp CHHHHHHHHHH----TTCCEEEEEESSC-------SSS--HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHH----cCCCEEEEECCch-------hhc--CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCC
Confidence 34677766654 6999875542211 111 12356778889999999999984 556677777666 69
Q ss_pred ceecccCCccCCHHHHHHHH-hcCC---eEEEeCC------------C----CCCHHHHHHHHHHHHHcCCCcEEEEeec
Q 022892 108 DIIQIPAFLCRQTDLLVAAA-KTGK---IINIKKG------------Q----FCASSVMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 108 d~~kIgs~~~~n~~lL~~~a-~~~~---PVilstG------------~----~~tl~e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
|.+-+|+..+.+..++.++. ..+. -+.++.. - ..+..|+.. .+...|-.. ++++..
T Consensus 98 d~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~---~~~~~G~~~-i~~~~~ 173 (253)
T 1thf_D 98 DKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVV---EVEKRGAGE-ILLTSI 173 (253)
T ss_dssp SEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH---HHHHTTCSE-EEEEET
T ss_pred CEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHH---HHHHCCCCE-EEEEec
Confidence 99999999998877665543 3331 2344431 0 013334322 233456544 444543
Q ss_pred CCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 168 TMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 168 s~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
..-+. ..-.|+..+..+++ .++||+.+..-+. +.-+..+...||+|+++=+-+
T Consensus 174 ~~~g~-~~g~~~~~~~~l~~~~~ipvia~GGI~~----------------------~~d~~~~~~~Gadgv~vGsal 227 (253)
T 1thf_D 174 DRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGK----------------------MEHFLEAFLAGADAALAASVF 227 (253)
T ss_dssp TTTTS-CSCCCHHHHHHHGGGCCSCEEEESCCCS----------------------HHHHHHHHHTTCSEEEESHHH
T ss_pred cCCCC-CCCCCHHHHHHHHHhcCCCEEEECCCCC----------------------HHHHHHHHHcCChHHHHHHHH
Confidence 32111 12247788888887 7899988533221 222334457899999998765
No 30
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.98 E-value=0.016 Score=51.75 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=107.0
Q ss_pred cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEE-EeecCcccHHHHh
Q 022892 27 ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIV-TDVHETVQCEEVG 104 (290)
Q Consensus 27 en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~-s~~~d~~~~~~l~ 104 (290)
++.+...++|+.|++ .|+.+|-.. ++ . ..+++.++++++++ ++.+- -|+++.++++.+.
T Consensus 43 ~~~~~a~~~a~al~~----gGi~~iEvt-~~-----------t---~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai 103 (232)
T 4e38_A 43 DNAEDIIPLGKVLAE----NGLPAAEIT-FR-----------S---DAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAK 103 (232)
T ss_dssp SSGGGHHHHHHHHHH----TTCCEEEEE-TT-----------S---TTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----CCCCEEEEe-CC-----------C---CCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHH
Confidence 355677888888887 589877552 21 1 23455555566655 33333 3899999999988
Q ss_pred h-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC-CchhH
Q 022892 105 K-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNL 182 (290)
Q Consensus 105 ~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~-dL~~i 182 (290)
+ .++++-.|. .+.++++++-+.+.|++- |.+ |++|+..|.+ .|-+-+-+ | |...+ .+..+
T Consensus 104 ~AGA~fIvsP~---~~~~vi~~~~~~gi~~ip--Gv~-TptEi~~A~~----~Gad~vK~------F--Pa~~~gG~~~l 165 (232)
T 4e38_A 104 EAGATFVVSPG---FNPNTVRACQEIGIDIVP--GVN-NPSTVEAALE----MGLTTLKF------F--PAEASGGISMV 165 (232)
T ss_dssp HHTCSEEECSS---CCHHHHHHHHHHTCEEEC--EEC-SHHHHHHHHH----TTCCEEEE------C--STTTTTHHHHH
T ss_pred HcCCCEEEeCC---CCHHHHHHHHHcCCCEEc--CCC-CHHHHHHHHH----cCCCEEEE------C--cCccccCHHHH
Confidence 7 799998776 578888988888999987 666 9999999854 57655544 3 33323 35667
Q ss_pred HHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 183 EWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 183 ~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
..++. + ++|++- +=++ . +.-+....++|+.++++=+-+++..
T Consensus 166 kal~~p~p~ip~~p--tGGI-------------~--------~~n~~~~l~aGa~~~vgGs~l~~~~ 209 (232)
T 4e38_A 166 KSLVGPYGDIRLMP--TGGI-------------T--------PSNIDNYLAIPQVLACGGTWMVDKK 209 (232)
T ss_dssp HHHHTTCTTCEEEE--BSSC-------------C--------TTTHHHHHTSTTBCCEEECGGGCHH
T ss_pred HHHHHHhcCCCeee--EcCC-------------C--------HHHHHHHHHCCCeEEEECchhcChH
Confidence 77776 5 577753 2221 1 1124456788888888877776543
No 31
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.98 E-value=0.0045 Score=54.25 Aligned_cols=170 Identities=12% Similarity=0.062 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
..+.|+.+.+ .|++.+-....+. .|.+.. .. ..++++++..++|+.. -+.++++++.+.+ .+|
T Consensus 33 ~~~~a~~~~~----~Gad~i~v~~~d~-------~~~~~~--~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad 98 (244)
T 2y88_A 33 AVDAALGWQR----DGAEWIHLVDLDA-------AFGRGS--NH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCA 98 (244)
T ss_dssp HHHHHHHHHH----TTCSEEEEEEHHH-------HTTSCC--CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----cCCCEEEEEcCcc-------cccCCC--hH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCC
Confidence 4667776655 6999877654331 122111 22 7788888899999987 3566677877766 699
Q ss_pred eecccCCccCCHHHHHHHHh-cCC--eEEEeCC------------CC---CCHHHHHHHHHHHHHcCCCcEEEEeecCC-
Q 022892 109 IIQIPAFLCRQTDLLVAAAK-TGK--IINIKKG------------QF---CASSVMVNSAEKVRLAGNPNVMVCERGTM- 169 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~-~~~--PVilstG------------~~---~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~- 169 (290)
.+-+|+..+.|.+++.++.+ .+. -+.++.. -. .+..|+ ++.+...|-..+. ++..+.
T Consensus 99 ~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~---~~~~~~~G~~~i~-~~~~~~~ 174 (244)
T 2y88_A 99 RVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDV---LERLDSEGCSRFV-VTDITKD 174 (244)
T ss_dssp EEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHH---HHHHHHTTCCCEE-EEETTTT
T ss_pred EEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHH---HHHHHhCCCCEEE-EEecCCc
Confidence 99999999998877766533 222 1222211 00 022333 2334445665554 444332
Q ss_pred CCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc---CCCEEEEeeeC
Q 022892 170 FGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV---GVDGVFMEVHD 243 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~---GA~G~~IEkH~ 243 (290)
..+. -.|+..+..+++ .++||+.+..=.. +.-+..+..+ ||+|+++=+-+
T Consensus 175 ~~~~--g~~~~~~~~l~~~~~ipvia~GGI~~----------------------~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 175 GTLG--GPNLDLLAGVADRTDAPVIASGGVSS----------------------LDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp TTTS--CCCHHHHHHHHTTCSSCEEEESCCCS----------------------HHHHHHHHTTGGGTEEEEEECHHH
T ss_pred cccC--CCCHHHHHHHHHhCCCCEEEECCCCC----------------------HHHHHHHHhhccCCCCEEEEcHHH
Confidence 2232 247888888887 7899988543321 2334445666 99999998755
No 32
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.98 E-value=0.066 Score=48.74 Aligned_cols=177 Identities=12% Similarity=-0.010 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhc--CCcEEEeecCcccHHH------Hhh-hcc-eecccC--------Ccc-CCH----HHHHHHHh-c
Q 022892 74 EGLKILEKVKIAY--DIPIVTDVHETVQCEE------VGK-VAD-IIQIPA--------FLC-RQT----DLLVAAAK-T 129 (290)
Q Consensus 74 ~~l~~L~~~~~~~--Gi~~~s~~~d~~~~~~------l~~-~~d-~~kIgs--------~~~-~n~----~lL~~~a~-~ 129 (290)
..++.+.+..+.. +.|++..++....-++ +.+ .+| ++-|.- +.. .+. ++++++-+ .
T Consensus 78 ~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~ 157 (311)
T 1jub_A 78 YYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF 157 (311)
T ss_dssp HHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc
Confidence 3345555554456 8898888875332222 222 257 666621 111 233 44555543 4
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec-----CC-------------C-CCCC---CCCCchhHHHHHh
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG-----TM-------------F-GYND---LIVDPRNLEWMRE 187 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g-----s~-------------~-~y~~---~~~dL~~i~~lk~ 187 (290)
++||++|.....+.+++.+.++.+.+.|-+-|++..++ .. + +|.. ....+..+..+++
T Consensus 158 ~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~ 237 (311)
T 1jub_A 158 TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYT 237 (311)
T ss_dssp CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHH
Confidence 78999998877688898888888888886555443322 00 0 0000 0123566777777
Q ss_pred -c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHH
Q 022892 188 -A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEEL 264 (290)
Q Consensus 188 -~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~l 264 (290)
. ++||+....=. . ..-+..++++||++++|=+-+-- -+|.-++++
T Consensus 238 ~~~~~ipvi~~GGI~-----------------~-----~~da~~~l~~GAd~V~vg~~~l~----------~~p~~~~~i 285 (311)
T 1jub_A 238 RLKPEIQIIGTGGIE-----------------T-----GQDAFEHLLCGATMLQIGTALHK----------EGPAIFDRI 285 (311)
T ss_dssp TSCTTSEEEEESSCC-----------------S-----HHHHHHHHHHTCSEEEECHHHHH----------HCTHHHHHH
T ss_pred hcCCCCCEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEEchHHHh----------cCcHHHHHH
Confidence 6 79998743221 1 33455667889999988766511 135677888
Q ss_pred HHHHHHHHHHhCCccccc
Q 022892 265 LEELVAIAKVSKGKQRMN 282 (290)
Q Consensus 265 v~~ir~~~~~lg~~~~~~ 282 (290)
.+.++..-...|-+++-+
T Consensus 286 ~~~l~~~l~~~g~~si~e 303 (311)
T 1jub_A 286 IKELEEIMNQKGYQSIAD 303 (311)
T ss_dssp HHHHHHHHHHHTCCSGGG
T ss_pred HHHHHHHHHHcCCCCHHH
Confidence 888777666666655433
No 33
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.98 E-value=0.1 Score=46.07 Aligned_cols=163 Identities=17% Similarity=0.132 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe---------ec-Cc-
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD---------VH-ET- 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~---------~~-d~- 97 (290)
.....++|+... +.|+.++.-. +.+.+++.++..++|++-- ++ ++
T Consensus 35 ~~~~~~~A~a~~----~~Ga~~i~~~--------------------~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~ 90 (232)
T 3igs_A 35 PEIVAAMALAAE----QAGAVAVRIE--------------------GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPF 90 (232)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEE--------------------SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCS
T ss_pred cchHHHHHHHHH----HCCCeEEEEC--------------------CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCcc
Confidence 444455555544 4698887642 2456777888889998731 11 12
Q ss_pred -ccHHHHhh-hcceecccCCcc----CCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC
Q 022892 98 -VQCEEVGK-VADIIQIPAFLC----RQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG 171 (290)
Q Consensus 98 -~~~~~l~~-~~d~~kIgs~~~----~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~ 171 (290)
++++.+.+ .+|++-+.+... +-.++++.+.+.+++++.+.. |.+|.+.|. ..|-+-|.+..+|....
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~----~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS---SVDDGLACQ----RLGADIIGTTMSGYTTP 163 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC---SHHHHHHHH----HTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC---CHHHHHHHH----hCCCCEEEEcCccCCCC
Confidence 24555555 699988877643 234677888888999998753 888887764 35655443223332100
Q ss_pred CCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 172 YNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 172 y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
-.....|+..+..+++.++||+..+.=. . +.-...+.++||+|+++=+.++
T Consensus 164 ~~~~~~~~~~i~~l~~~~ipvIA~GGI~-----------------t-----~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 164 DTPEEPDLPLVKALHDAGCRVIAEGRYN-----------------S-----PALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp SCCSSCCHHHHHHHHHTTCCEEEESCCC-----------------S-----HHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCCCCHHHHHHHHhcCCcEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEEehHhc
Confidence 0112357777777766689998743211 1 3344566788999999988774
No 34
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.97 E-value=0.025 Score=48.75 Aligned_cols=163 Identities=15% Similarity=0.087 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec------------
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH------------ 95 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~------------ 95 (290)
+.....++|+++.+ .|++.+... +.+.++++++..++|++....
T Consensus 21 ~~~~~~~~a~~~~~----~Ga~~i~~~--------------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~ 76 (223)
T 1y0e_A 21 SSFIMSKMALAAYE----GGAVGIRAN--------------------TKEDILAIKETVDLPVIGIVKRDYDHSDVFITA 76 (223)
T ss_dssp CHHHHHHHHHHHHH----HTCSEEEEE--------------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSC
T ss_pred CCccHHHHHHHHHH----CCCeeeccC--------------------CHHHHHHHHHhcCCCEEeeeccCCCccccccCC
Confidence 34455666666655 599887431 234466666778999863211
Q ss_pred CcccHHHHhh-hcceecccCCccCC-----HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec
Q 022892 96 ETVQCEEVGK-VADIIQIPAFLCRQ-----TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 96 d~~~~~~l~~-~~d~~kIgs~~~~n-----~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
+.+.++.+.+ .+|++.+++....+ .++++++.+. +++++++. . |++|+..+ ...|-.-+.+...|
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~--~-t~~e~~~~----~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI--A-TVEEAKNA----ARLGFDYIGTTLHG 149 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC--S-SHHHHHHH----HHTTCSEEECTTTT
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC--C-CHHHHHHH----HHcCCCEEEeCCCc
Confidence 1234555544 68999888876543 4778888777 88998754 3 78886654 44666444332322
Q ss_pred CC---CCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 168 TM---FGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 168 s~---~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
.. ++......++..+..+++ .++||+.+..=. . ..-+..+.++||+|+++=+-+
T Consensus 150 ~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~-----------------~-----~~~~~~~~~~Gad~v~vG~al 207 (223)
T 1y0e_A 150 YTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVI-----------------T-----PDMYKRVMDLGVHCSVVGGAI 207 (223)
T ss_dssp SSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCC-----------------S-----HHHHHHHHHTTCSEEEECHHH
T ss_pred CcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCC-----------------C-----HHHHHHHHHcCCCEEEEChHH
Confidence 11 111001234556666776 789998854331 1 344556678899999987654
No 35
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.94 E-value=0.084 Score=48.81 Aligned_cols=185 Identities=15% Similarity=0.058 Sum_probs=103.4
Q ss_pred hhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCC-CEEeccccccCCCCCcccCCCCChhHH-HHHHHHH
Q 022892 5 TALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGL-PLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKV 82 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~-~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~ 82 (290)
|.+-..++-..| ++.|+...+-+ .+++ ..+.++|. ..+...... .+. .++++++
T Consensus 3 t~~~~~l~~~~P-ii~apM~g~s~----~~la----~av~~aG~lG~i~~~~~~---------------~~~~~~~i~~i 58 (332)
T 2z6i_A 3 TRITELLKIDYP-IFQGGMAWVAD----GDLA----GAVSKAGGLGIIGGGNAP---------------KEVVKANIDKI 58 (332)
T ss_dssp CHHHHHHTCSSS-EEECCCTTTCC----HHHH----HHHHHHTSBEEEECTTCC---------------HHHHHHHHHHH
T ss_pred ChhhHHhCCCCC-EEeCCCCCCCc----HHHH----HHHHhCCCcEEeCCCCCC---------------HHHHHHHHHHH
Confidence 455555555555 66776665433 2333 33445685 444322111 122 2334444
Q ss_pred HHhcCCcEEEeecC--c---ccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 83 KIAYDIPIVTDVHE--T---VQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 83 ~~~~Gi~~~s~~~d--~---~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+..+.|+..-++- + +.++.+.+ .+|++.++...- .++++++-+.+.||+++- . +++++..+ ...
T Consensus 59 ~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~p--~~~i~~l~~~g~~v~~~v--~-~~~~a~~~----~~~ 129 (332)
T 2z6i_A 59 KSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNP--SKYMERFHEAGIIVIPVV--P-SVALAKRM----EKI 129 (332)
T ss_dssp HHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCG--GGTHHHHHHTTCEEEEEE--S-SHHHHHHH----HHT
T ss_pred HHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCCh--HHHHHHHHHcCCeEEEEe--C-CHHHHHHH----HHc
Confidence 44456777776664 2 33444444 699999988642 345666766799999886 3 67765544 345
Q ss_pred CCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 157 GNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 157 Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
|-+-|+ ++....-++.....++..++.+++ .++||+....=. . +.-+.+++++||+
T Consensus 130 GaD~i~-v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~-----------------~-----~~~~~~al~~GAd 186 (332)
T 2z6i_A 130 GADAVI-AEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA-----------------D-----GEGAAAGFMLGAE 186 (332)
T ss_dssp TCSCEE-EECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-----------------S-----HHHHHHHHHTTCS
T ss_pred CCCEEE-EECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC-----------------C-----HHHHHHHHHcCCC
Confidence 654444 442111111112245667777777 789998742211 1 2345567789999
Q ss_pred EEEEeeeCCC
Q 022892 236 GVFMEVHDDP 245 (290)
Q Consensus 236 G~~IEkH~t~ 245 (290)
|+++=+-|--
T Consensus 187 gV~vGs~~l~ 196 (332)
T 2z6i_A 187 AVQVGTRFVV 196 (332)
T ss_dssp EEEECHHHHT
T ss_pred EEEecHHHhc
Confidence 9998776533
No 36
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.92 E-value=0.034 Score=50.72 Aligned_cols=182 Identities=18% Similarity=0.101 Sum_probs=118.6
Q ss_pred CCCeEEEEccCC-------ccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc
Q 022892 14 AEPFFLLAGPNV-------IESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY 86 (290)
Q Consensus 14 ~~~~~iIAgpcs-------ien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~ 86 (290)
.+++-||||.-- |-..-...++|+...+ .|+.++.--+ -+..|+| .+..|+++++..
T Consensus 56 ~~~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~----~GA~~IsVlt-------d~~~f~G-----s~~~L~~ir~~v 119 (272)
T 3tsm_A 56 AGQFALIAEIKKASPSKGLIRPDFDPPALAKAYEE----GGAACLSVLT-------DTPSFQG-----APEFLTAARQAC 119 (272)
T ss_dssp TTCCEEEEEECSEETTTEESCSSCCHHHHHHHHHH----TTCSEEEEEC-------CSTTTCC-----CHHHHHHHHHTS
T ss_pred cCCceEEEEeccCCCCCCccCCCCCHHHHHHHHHH----CCCCEEEEec-------cccccCC-----CHHHHHHHHHhc
Confidence 356799997532 2111134677777665 6999885432 2222432 456777778889
Q ss_pred CCcEEEee--cCcccHHHHhh-hcceecccCCccCCH---HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCc
Q 022892 87 DIPIVTDV--HETVQCEEVGK-VADIIQIPAFLCRQT---DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPN 160 (290)
Q Consensus 87 Gi~~~s~~--~d~~~~~~l~~-~~d~~kIgs~~~~n~---~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~ 160 (290)
++|++.-= .|+.++..+.. .+|.+-+....+.+. .|++.+-.+|+-+++... |.+|++.|.+ .|.+-
T Consensus 120 ~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh---~~eEl~~A~~----~ga~i 192 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVH---DEAEMERALK----LSSRL 192 (272)
T ss_dssp SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHTT----SCCSE
T ss_pred CCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHh----cCCCE
Confidence 99998744 56777777766 699998888887654 355556678999999885 8999988753 45543
Q ss_pred EEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEE
Q 022892 161 VMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGV 237 (290)
Q Consensus 161 i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~ 237 (290)
|-+-.| ++....+|+.....|.+ . ++||+.- +.- .. +.-+..+..+||+|+
T Consensus 193 IGinnr----~l~t~~~dl~~~~~L~~~ip~~~~vIae-sGI----------------~t-----~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 193 LGVNNR----NLRSFEVNLAVSERLAKMAPSDRLLVGE-SGI----------------FT-----HEDCLRLEKSGIGTF 246 (272)
T ss_dssp EEEECB----CTTTCCBCTHHHHHHHHHSCTTSEEEEE-SSC----------------CS-----HHHHHHHHTTTCCEE
T ss_pred EEECCC----CCccCCCChHHHHHHHHhCCCCCcEEEE-CCC----------------CC-----HHHHHHHHHcCCCEE
Confidence 333333 34445678877777765 3 5777652 211 01 444556688999999
Q ss_pred EEeeeCC
Q 022892 238 FMEVHDD 244 (290)
Q Consensus 238 ~IEkH~t 244 (290)
+|=..++
T Consensus 247 LVG~alm 253 (272)
T 3tsm_A 247 LIGESLM 253 (272)
T ss_dssp EECHHHH
T ss_pred EEcHHHc
Confidence 9988774
No 37
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=96.89 E-value=0.14 Score=47.27 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=104.3
Q ss_pred CCeEEEEccCCcc----------CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH----HHH
Q 022892 15 EPFFLLAGPNVIE----------SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK----ILE 80 (290)
Q Consensus 15 ~~~~iIAgpcsie----------n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~----~L~ 80 (290)
.++.|+...+.-- +.+..++.|+++++ .||++|--.... |.|+. .....++.++ .++
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~----~GAdiIDIGgeS----trPga-~~v~~~eE~~RvvpvI~ 108 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRD----EGAHIIDIGGES----TRPGF-AKVSVEEEIKRVVPMIQ 108 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHH----TTCSEEEEESCC--------C-CCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHH----cCCCEEEECCCc----CCCCC-CCCCHHHHHHHHHHHHH
Confidence 4667877766521 24556666666665 699998776433 22331 1111234443 345
Q ss_pred HHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeC--CCCCC--------HHHHHHH
Q 022892 81 KVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA--------SSVMVNS 149 (290)
Q Consensus 81 ~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilst--G~~~t--------l~e~~~A 149 (290)
.+.++.++|+..+-++++.++...+ ..+++-=-+.......+++.+++.+.||++.. |+. . .+.+...
T Consensus 109 ~l~~~~~vpiSIDT~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p-~y~d~v~ev~~~l~~~ 187 (297)
T 1tx2_A 109 AVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM-NYRNLMADMIADLYDS 187 (297)
T ss_dssp HHHHHSCSCEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCC-CCSSHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCC-CcchHHHHHHHHHHHH
Confidence 5556679999999999999988766 57766322222224577888999999999966 433 2 3556666
Q ss_pred HHHHHHcCCC-cEEEEeecCCCCCCCCCCCchhHHHH---HhcCCCEEEeCC
Q 022892 150 AEKVRLAGNP-NVMVCERGTMFGYNDLIVDPRNLEWM---REANCPVVADVT 197 (290)
Q Consensus 150 ve~i~~~Gn~-~i~L~~~gs~~~y~~~~~dL~~i~~l---k~~~~pV~~D~s 197 (290)
++.+.+.|-+ +=+++..|..|+... .-|+..+..+ +++++||.+-.|
T Consensus 188 i~~a~~~GI~~~~IilDPg~Gfgk~~-~~n~~ll~~l~~l~~lg~Pvl~G~S 238 (297)
T 1tx2_A 188 IKIAKDAGVRDENIILDPGIGFAKTP-EQNLEAMRNLEQLNVLGYPVLLGTS 238 (297)
T ss_dssp HHHHHHTTCCGGGEEEECCTTSSCCH-HHHHHHHHTGGGGGGGCSCBEEECT
T ss_pred HHHHHHcCCChhcEEEeCCCCcCCCH-HHHHHHHHHHHHHHhCCCCEEEEec
Confidence 7778888865 236677887554322 1233333333 346899877444
No 38
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.87 E-value=0.061 Score=47.56 Aligned_cols=162 Identities=20% Similarity=0.185 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE---e------ec-Cc-
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT---D------VH-ET- 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s---~------~~-d~- 97 (290)
.....++|+. +++.|+.++.-. +.+.+++.++..++|++. . +| ++
T Consensus 35 ~~~~~~~A~a----~~~~Ga~~i~~~--------------------~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~ 90 (229)
T 3q58_A 35 PEIVAAMAQA----AASAGAVAVRIE--------------------GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPY 90 (229)
T ss_dssp HHHHHHHHHH----HHHTTCSEEEEE--------------------SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCS
T ss_pred cchHHHHHHH----HHHCCCcEEEEC--------------------CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCcc
Confidence 4444444444 444788887642 245677777888999872 2 11 12
Q ss_pred -ccHHHHhh-hcceecccCCcc----CCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-C
Q 022892 98 -VQCEEVGK-VADIIQIPAFLC----RQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM-F 170 (290)
Q Consensus 98 -~~~~~l~~-~~d~~kIgs~~~----~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~-~ 170 (290)
++++.+.+ .+|++-+.+... +-.++++++.+.+++++.... |.+|.+.|. +.|-+-|.+..+|.. .
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~----~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS---TVNEGISCH----QKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS---SHHHHHHHH----HTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC---CHHHHHHHH----hCCCCEEEecCccCCCC
Confidence 24555555 699888776543 234677888888999998753 888887764 356654432223321 0
Q ss_pred CCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 171 GYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 171 ~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
.+ ....|+..+..+++.++||+..+.=. . +.-+..+.++||+|+++=+.++
T Consensus 164 ~~-~~~~~~~li~~l~~~~ipvIA~GGI~-----------------t-----~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 164 IT-PVEPDLAMVTQLSHAGCRVIAEGRYN-----------------T-----PALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp CC-CSSCCHHHHHHHHTTTCCEEEESSCC-----------------S-----HHHHHHHHHTTCSEEEECHHHH
T ss_pred Cc-CCCCCHHHHHHHHHcCCCEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEEchHhc
Confidence 11 12356777777765589998743211 1 3445567888999999987764
No 39
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.84 E-value=0.043 Score=48.58 Aligned_cols=172 Identities=15% Similarity=0.109 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d 108 (290)
..++|+++.+ .|++.+...... +. +.+.+ ..+..+++++++.++|++.. +.++++++.+.+ .+|
T Consensus 32 ~~~~a~~~~~----~Ga~~i~v~d~~---~~----~~~~g--~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad 98 (266)
T 2w6r_A 32 LRDWVVEVEK----RGAGEILLTSID---RD----GTKSG--YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD 98 (266)
T ss_dssp HHHHHHHHHH----HTCSEEEEEETT---TS----SCSSC--CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCS
T ss_pred HHHHHHHHHH----CCCCEEEEEecC---cc----cCCCc--ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCc
Confidence 5677777766 599987763221 11 11112 23677888888899999984 345566776666 699
Q ss_pred eecccCCcc-C--CHHHHHHHHhc-C---CeEEEeCCC---C---------------CCHHHHHHHHHHHHHcCCCcEEE
Q 022892 109 IIQIPAFLC-R--QTDLLVAAAKT-G---KIINIKKGQ---F---------------CASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 109 ~~kIgs~~~-~--n~~lL~~~a~~-~---~PVilstG~---~---------------~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
.+-+|+..+ . +.+.++++.+. + ..++++-.. . .+..|+...+ ...|-..| +
T Consensus 99 ~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~---~~~G~~~i-~ 174 (266)
T 2w6r_A 99 KALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEV---EKRGAGEI-L 174 (266)
T ss_dssp EEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH---HHTTCSEE-E
T ss_pred HhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHH---HHcCCCEE-E
Confidence 999999999 4 77777776432 3 133222211 0 1355553333 34565444 4
Q ss_pred EeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 164 CERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 164 ~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
++..+..+.. .-+|+..+..+++ .++||+... |.+. +.-+......||+|+++=+-
T Consensus 175 ~t~~~~~g~~-~g~~~~~i~~l~~~~~ipvia~G--------------------GI~~--~ed~~~~~~~Gadgv~vgsa 231 (266)
T 2w6r_A 175 LTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASG--------------------GAGK--MEHFLEAFLAGADAALAASV 231 (266)
T ss_dssp EEETTTTTTC-SCCCHHHHHHHGGGCCSCEEEES--------------------CCCS--HHHHHHHHHHTCSEEEESTT
T ss_pred EEeecCCCCc-CCCCHHHHHHHHHHcCCCEEEeC--------------------CCCC--HHHHHHHHHcCCHHHHccHH
Confidence 4543322211 1247788888888 789998732 2111 22233344679999999876
Q ss_pred C
Q 022892 243 D 243 (290)
Q Consensus 243 ~ 243 (290)
+
T Consensus 232 l 232 (266)
T 2w6r_A 232 F 232 (266)
T ss_dssp T
T ss_pred H
Confidence 5
No 40
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.84 E-value=0.13 Score=46.71 Aligned_cols=216 Identities=13% Similarity=0.051 Sum_probs=126.5
Q ss_pred CCCeEEEEccCCcc-----------CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHH
Q 022892 14 AEPFFLLAGPNVIE-----------SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKV 82 (290)
Q Consensus 14 ~~~~~iIAgpcsie-----------n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~ 82 (290)
+.++.+|.|..-+- +.+..++.|+++++ .|++++=-..-.. -. -+++.-...++.+
T Consensus 7 ~~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~----~GAdiIDIg~~s~--------~~-eE~~rv~~vi~~l 73 (271)
T 2yci_X 7 SHMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAE----KGAHYLDVNTGPT--------AD-DPVRVMEWLVKTI 73 (271)
T ss_dssp CCCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHH----TTCSEEEEECCSC--------SS-CHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHH----CCCCEEEEcCCcC--------ch-hHHHHHHHHHHHH
Confidence 45677777765331 34566777777776 6999876543220 00 0111223334555
Q ss_pred HHhcCCcEEEeecCcccHHHHhhh---cceec-ccCCccCC-HHHHHHHHhcCCeEEEeC----CCCCC----HHHHHHH
Q 022892 83 KIAYDIPIVTDVHETVQCEEVGKV---ADIIQ-IPAFLCRQ-TDLLVAAAKTGKIINIKK----GQFCA----SSVMVNS 149 (290)
Q Consensus 83 ~~~~Gi~~~s~~~d~~~~~~l~~~---~d~~k-Igs~~~~n-~~lL~~~a~~~~PVilst----G~~~t----l~e~~~A 149 (290)
.+..++|+.-+-++++.++...+. .+++- |.+.. .+ ..++..+++.+.||++-. |+..| ++...+.
T Consensus 74 ~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~ 152 (271)
T 2yci_X 74 QEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQ-WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMEL 152 (271)
T ss_dssp HHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCH-HHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHH
T ss_pred HHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCc-cccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 566799999999999988876553 55554 44443 21 457788889999999854 45546 4555556
Q ss_pred HHHHHHcCCC-cEEEEeecCCC-CCCCCCCC---chhHHHHHhcC---CCEEEeCCCCCCCCCCCccCCCCccCCC--Cc
Q 022892 150 AEKVRLAGNP-NVMVCERGTMF-GYNDLIVD---PRNLEWMREAN---CPVVADVTHSLQQPAGKKLDGGGVASGG--LR 219 (290)
Q Consensus 150 ve~i~~~Gn~-~i~L~~~gs~~-~y~~~~~d---L~~i~~lk~~~---~pV~~D~sHs~~~~~~~~~~~~~~~~~g--~~ 219 (290)
++.+.+.|-+ +=+++..|..| ++.. .-| |+.+..+++.+ +|+.+-.|. .|.| .|
T Consensus 153 ~~~a~~~Gi~~~~IilDPg~gfigk~~-~~~~~~l~~l~~~~~~~~p~~p~l~G~Sn---------------ksfg~~~r 216 (271)
T 2yci_X 153 VANADAHGIPMTELYIDPLILPVNVAQ-EHAVEVLETIRQIKLMANPAPRTVLGLSN---------------VSQKCPDR 216 (271)
T ss_dssp HHHHHHTTCCGGGEEEECCCCCTTTST-HHHHHHHHHHHHHTTSSSSCCEEEEEGGG---------------GGTTCSSH
T ss_pred HHHHHHCCCCcccEEEecCCCccccCH-HHHHHHHHHHHHHHHhCCCCCCEEEeeCc---------------cccCCchH
Confidence 6777788854 35778888765 4433 234 34444445534 898763332 1223 23
Q ss_pred ccHHH-HHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 220 ELIPC-IARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 220 ~~~~~-~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+.+.. .+..|++.|++..++ |+ | +. ++++.++..+..+|.
T Consensus 217 ~~l~~t~~~~a~~~g~~~~iv--~~--------~-------d~-~~~~~~~~~~al~~~ 257 (271)
T 2yci_X 217 PLINRTYLVMAMTAGLDAAIM--DV--------D-------DD-ALVDAAATAHILLNK 257 (271)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE--CT--------T-------CH-HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhCCcEEE--CC--------C-------cH-HHHHHHHHHHHHhCC
Confidence 33332 344567889886666 54 1 12 566666666655443
No 41
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.78 E-value=0.28 Score=43.98 Aligned_cols=211 Identities=13% Similarity=0.075 Sum_probs=116.8
Q ss_pred CCchhhHHhhhcCCCCeEEEEc--cCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC-Ccc--------cCCC
Q 022892 1 MDPSTALFNQLKAAEPFFLLAG--PNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT-SSK--------SFRG 69 (290)
Q Consensus 1 ~~~~~~~~~~i~~~~~~~iIAg--pcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt-s~~--------~~~g 69 (290)
|+.-...|......++..+|.= +|.. +.+...+.++.|.+ .|+|++-.+....+|.- .+. .-.|
T Consensus 1 m~~~~~~f~~~~~~~~~~~i~~i~~gdp-~~~~~~~~~~~l~~----~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G 75 (268)
T 1qop_A 1 MERYENLFAQLNDRREGAFVPFVTLGDP-GIEQSLKIIDTLID----AGADALELGVPFSDPLADGPTIQNANLRAFAAG 75 (268)
T ss_dssp CCHHHHHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHHHHHHH----TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHhcCCceEEEEeeCCCC-CHHHHHHHHHHHHH----CCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC
Confidence 3333456665543333233322 2222 55777888888877 69999888752222211 110 0123
Q ss_pred CChhHHHHHHHHHHHh-cCCcEEEee-cCc-------ccHHHHhh-hcceecccCCccC-CHHHHHHHHhcCCe-EEEeC
Q 022892 70 PGMVEGLKILEKVKIA-YDIPIVTDV-HET-------VQCEEVGK-VADIIQIPAFLCR-QTDLLVAAAKTGKI-INIKK 137 (290)
Q Consensus 70 ~~~~~~l~~L~~~~~~-~Gi~~~s~~-~d~-------~~~~~l~~-~~d~~kIgs~~~~-n~~lL~~~a~~~~P-Vilst 137 (290)
..+..+++.++++.+. ..+|+.--. +++ ..++.+.+ .+|.+-++.-... -..+++.+-+.+.. +.+-+
T Consensus 76 ~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~ 155 (268)
T 1qop_A 76 VTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICP 155 (268)
T ss_dssp CCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEEC
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEC
Confidence 3334567788888888 789985532 332 33444444 5887777755543 34566667777765 55555
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCC--CCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 138 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYND--LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 138 G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~--~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
..+ +.+.+...++. +. ..+++-....+ +... ..-.+.-+..+|+ .++||.++.-=+
T Consensus 156 p~t-~~~~i~~i~~~----~~-g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~-------------- 215 (268)
T 1qop_A 156 PNA-DDDLLRQVASY----GR-GYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGIS-------------- 215 (268)
T ss_dssp TTC-CHHHHHHHHHH----CC-SCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCC--------------
T ss_pred CCC-CHHHHHHHHhh----CC-CcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCC--------------
Confidence 545 66666655432 22 23333322111 2211 1112467778888 789998743211
Q ss_pred cCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 214 ASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 214 ~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
. +..+..++..||||+|+=+.++
T Consensus 216 ---t-----~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 216 ---S-----PEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp ---S-----HHHHHHHHHTTCSEEEECHHHH
T ss_pred ---C-----HHHHHHHHHcCCCEEEEChHHh
Confidence 1 4556667889999999988764
No 42
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=96.70 E-value=0.24 Score=45.69 Aligned_cols=187 Identities=15% Similarity=0.078 Sum_probs=105.6
Q ss_pred chhhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHH-HHHHH
Q 022892 3 PSTALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGL-KILEK 81 (290)
Q Consensus 3 ~~~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l-~~L~~ 81 (290)
-.|.+-..++-..| +|.|+.+.+-+ .+ ++..+.++|...+....+ .. .+.+ +++++
T Consensus 15 ~~t~~~~~l~~~~P-ii~apM~gvs~----~~----la~av~~aGglG~i~~~~-------------~~-~~~l~~~i~~ 71 (326)
T 3bo9_A 15 VRTRVTDLLEIEHP-ILMGGMAWAGT----PT----LAAAVSEAGGLGIIGSGA-------------MK-PDDLRKAISE 71 (326)
T ss_dssp CCCHHHHHHTCSSS-EEECCCTTTSC----HH----HHHHHHHTTSBEEEECTT-------------CC-HHHHHHHHHH
T ss_pred ecchhHHhcCCCCC-EEECCCCCCCC----HH----HHHHHHhCCCcEEeCCCC-------------CC-HHHHHHHHHH
Confidence 35666666665555 66666655423 23 334444567543332111 11 2333 34444
Q ss_pred HHHhcCCcEEEeecC--c---ccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 82 VKIAYDIPIVTDVHE--T---VQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 82 ~~~~~Gi~~~s~~~d--~---~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
+.+..+.||..-.+- + +.++.+.+ .+|++.++..+- ..+++.+.+.+.||+.+- . +.++...+. .
T Consensus 72 i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~p--~~~~~~l~~~g~~v~~~v--~-s~~~a~~a~----~ 142 (326)
T 3bo9_A 72 LRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGNP--TKYIRELKENGTKVIPVV--A-SDSLARMVE----R 142 (326)
T ss_dssp HHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSCC--HHHHHHHHHTTCEEEEEE--S-SHHHHHHHH----H
T ss_pred HHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCCc--HHHHHHHHHcCCcEEEEc--C-CHHHHHHHH----H
Confidence 444445666665443 3 34455444 599999987753 567788888899999865 3 777766554 4
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGV 234 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA 234 (290)
.|-+- ++++....-++.-...++..++.+++ .++||+.+..=. . ..-...++++||
T Consensus 143 ~GaD~-i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~----------------~------~~dv~~al~~GA 199 (326)
T 3bo9_A 143 AGADA-VIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIA----------------D------GRGMAAAFALGA 199 (326)
T ss_dssp TTCSC-EEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC----------------S------HHHHHHHHHHTC
T ss_pred cCCCE-EEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCC----------------C------HHHHHHHHHhCC
Confidence 56544 44543111011112246677777777 789998842211 1 222345677899
Q ss_pred CEEEEeeeCC
Q 022892 235 DGVFMEVHDD 244 (290)
Q Consensus 235 ~G~~IEkH~t 244 (290)
+|+++=+-|.
T Consensus 200 ~gV~vGs~~~ 209 (326)
T 3bo9_A 200 EAVQMGTRFV 209 (326)
T ss_dssp SEEEESHHHH
T ss_pred CEEEechHHH
Confidence 9999987653
No 43
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.66 E-value=0.012 Score=53.53 Aligned_cols=86 Identities=17% Similarity=0.121 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc----CCHHHHHHHHh-c--CCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC----RQTDLLVAAAK-T--GKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~----~n~~lL~~~a~-~--~~PVilstG~~~tl~ 144 (290)
.+.++.+.+.++++|+.++.++++++.++...+ .+|++.|..++. .++..++.+.+ . +.||+-.-|.. |.+
T Consensus 148 ~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~-t~e 226 (272)
T 3qja_A 148 QSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVR-GTA 226 (272)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-SHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCC-CHH
Confidence 356888999999999999999999999988766 699999998764 34555666654 3 68999999999 999
Q ss_pred HHHHHHHHHHHcCCCcEEE
Q 022892 145 VMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L 163 (290)
++... ...|-.-+++
T Consensus 227 dv~~l----~~~GadgvlV 241 (272)
T 3qja_A 227 DLLAY----AGAGADAVLV 241 (272)
T ss_dssp HHHHH----HHTTCSEEEE
T ss_pred HHHHH----HHcCCCEEEE
Confidence 98865 3456544444
No 44
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.62 E-value=0.021 Score=48.68 Aligned_cols=155 Identities=17% Similarity=0.128 Sum_probs=91.9
Q ss_pred HHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceeccc
Q 022892 36 AKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIP 113 (290)
Q Consensus 36 Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIg 113 (290)
+.++.+...+.|++++-.. + ++ + +..+.++.+++... .++.+-. ++.++++++...+ .+|++ ++
T Consensus 24 ~~~~~~~~~~~G~~~iev~-~----~~-~------~~~~~i~~ir~~~~-~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 24 AKEKALAVFEGGVHLIEIT-F----TV-P------DADTVIKELSFLKE-KGAIIGAGTVTSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp HHHHHHHHHHTTCCEEEEE-T----TS-T------THHHHHHHTHHHHH-TTCEEEEESCCSHHHHHHHHHHTCSEE-EC
T ss_pred HHHHHHHHHHCCCCEEEEe-C----CC-h------hHHHHHHHHHHHCC-CCcEEEecccCCHHHHHHHHHcCCCEE-Ec
Confidence 4444444555799988542 1 11 1 11233444444432 1455544 7788888887766 69999 76
Q ss_pred CCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCC
Q 022892 114 AFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCP 191 (290)
Q Consensus 114 s~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~p 191 (290)
... ...+++.+-+.++|++. |.. |.+|+..|.+ .|-+ ++-.+ +.....+..+..+++ + ++|
T Consensus 90 ~~~--~~~~~~~~~~~g~~vi~--g~~-t~~e~~~a~~----~Gad-~vk~~-------~~~~~g~~~~~~l~~~~~~~p 152 (205)
T 1wa3_A 90 PHL--DEEISQFCKEKGVFYMP--GVM-TPTELVKAMK----LGHT-ILKLF-------PGEVVGPQFVKAMKGPFPNVK 152 (205)
T ss_dssp SSC--CHHHHHHHHHHTCEEEC--EEC-SHHHHHHHHH----TTCC-EEEET-------THHHHHHHHHHHHHTTCTTCE
T ss_pred CCC--CHHHHHHHHHcCCcEEC--CcC-CHHHHHHHHH----cCCC-EEEEc-------CccccCHHHHHHHHHhCCCCc
Confidence 543 36788888889999987 555 8999887743 4654 32221 111123455666666 5 788
Q ss_pred EEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 192 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 192 V~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
|+.+.-=+ ..-......+||+|+++=+-+.
T Consensus 153 via~GGI~-----------------------~~~~~~~~~~Ga~~v~vGs~i~ 182 (205)
T 1wa3_A 153 FVPTGGVN-----------------------LDNVCEWFKAGVLAVGVGSALV 182 (205)
T ss_dssp EEEBSSCC-----------------------TTTHHHHHHHTCSCEEECHHHH
T ss_pred EEEcCCCC-----------------------HHHHHHHHHCCCCEEEECcccc
Confidence 87631111 1123456788999998877664
No 45
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.55 E-value=0.4 Score=43.97 Aligned_cols=114 Identities=11% Similarity=-0.004 Sum_probs=70.5
Q ss_pred ccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-C-CC
Q 022892 98 VQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-Y-ND 174 (290)
Q Consensus 98 ~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~-y-~~ 174 (290)
+.++.+.+ .+|++.++..+- .++++.+-+.+.||+.+. . +.++...+. ..|-+ .++++. ...+ + ..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p--~~~~~~l~~~gi~vi~~v--~-t~~~a~~~~----~~GaD-~i~v~g-~~~GG~~G~ 155 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDP--GEHIAEFRRHGVKVIHKC--T-AVRHALKAE----RLGVD-AVSIDG-FECAGHPGE 155 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCC--HHHHHHHHHTTCEEEEEE--S-SHHHHHHHH----HTTCS-EEEEEC-TTCSBCCCS
T ss_pred HHHHHHHhcCCCEEEEcCCCc--HHHHHHHHHcCCCEEeeC--C-CHHHHHHHH----HcCCC-EEEEEC-CCCCcCCCC
Confidence 34555555 599999886642 577788877899999764 3 777766543 35654 444542 1111 1 11
Q ss_pred -CCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 175 -LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 175 -~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
...++..++.+++ .++||+.+..=. . ..-...++++||+|+++=+-|.
T Consensus 156 ~~~~~~~~l~~v~~~~~iPviaaGGI~-----------------~-----~~~v~~al~~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 156 DDIPGLVLLPAAANRLRVPIIASGGFA-----------------D-----GRGLVAALALGADAINMGTRFL 205 (328)
T ss_dssp SCCCHHHHHHHHHTTCCSCEEEESSCC-----------------S-----HHHHHHHHHHTCSEEEESHHHH
T ss_pred ccccHHHHHHHHHHhcCCCEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEECHHHH
Confidence 1245667777777 689998853321 1 2234456778999999987663
No 46
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.55 E-value=0.044 Score=53.44 Aligned_cols=151 Identities=13% Similarity=0.083 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccC----CHHHHHHHHh---cCCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCR----QTDLLVAAAK---TGKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~----n~~lL~~~a~---~~~PVilstG~~~tl~ 144 (290)
.+.++.|.++++++|+.++.|+++.++++...+ ..+++-|-.+++. ++.....+.. .+.+|+-..|.. |.+
T Consensus 143 ~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~-t~e 221 (452)
T 1pii_A 143 DDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN-TYA 221 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCC-CHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCC-CHH
Confidence 367999999999999999999999999998777 6999988888763 2333333322 267999999999 999
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCC-CCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHH
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERGTMF-GYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 223 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~ 223 (290)
++..+.+. -+-+| .|++. ..++ .. ..+..|....+.| |--+. +
T Consensus 222 dv~~~~~~------a~avL--VGealmr~~d--~~-~~~~~l~~~~~KI---CGit~----------------------~ 265 (452)
T 1pii_A 222 QVRELSHF------ANGFL--IGSALMAHDD--LH-AAVRRVLLGENKV---CGLTR----------------------G 265 (452)
T ss_dssp HHHHHTTT------CSEEE--ECHHHHTCSC--HH-HHHHHHHHCSCEE---CCCCS----------------------H
T ss_pred HHHHHHHh------CCEEE--EcHHHcCCcC--HH-HHHHHHHHHhccc---cCCCc----------------------H
Confidence 99887543 12344 34421 1111 11 3444444323445 33332 5
Q ss_pred HHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHH
Q 022892 224 CIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEE 267 (290)
Q Consensus 224 ~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ 267 (290)
.-+.+|+.+||| .+=.-|.+ ..+-..++++.+++++.
T Consensus 266 eda~~a~~~Gad--~iGfIf~~-----~SpR~V~~~~a~~i~~~ 302 (452)
T 1pii_A 266 QDAKAAYDAGAI--YGGLIFVA-----TSPRCVNVEQAQEVMAA 302 (452)
T ss_dssp HHHHHHHHHTCS--EEEEECCT-----TCTTBCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCC--EEEeecCC-----CCCCCCCHHHHHHHHhc
Confidence 667888999998 56555533 33345677777777543
No 47
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.52 E-value=0.056 Score=51.23 Aligned_cols=227 Identities=19% Similarity=0.206 Sum_probs=118.4
Q ss_pred CchhhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccc---cccCCCCCcccCCCCChhHHHHH
Q 022892 2 DPSTALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSS---FDKANRTSSKSFRGPGMVEGLKI 78 (290)
Q Consensus 2 ~~~~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~---~~k~~rts~~~~~g~~~~~~l~~ 78 (290)
|-||.++ ......| ++|+-... ..+...++-+.|.+.|+++|+..+.-.. .+. | . ..+.++.
T Consensus 48 d~st~~~-g~~l~~P-v~ia~MtG--gt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~-~----~------~~~s~~~ 112 (368)
T 3vkj_A 48 NTKTKFF-RKEISVP-VMVTGMTG--GRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEK-A----E------ARESFAI 112 (368)
T ss_dssp BCCEEET-TEEESSS-EEECCCCC--SSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHC-G----G------GSHHHHH
T ss_pred cceeEEC-CEeccCC-eEEecCCC--CCchhhHHHHHHHHHHHHhCCCeeeecchhccCC-H----H------HHhhHHH
Confidence 4455555 3333444 67776644 3455678899999999999987653321 110 1 0 1122222
Q ss_pred HHHHHHhcCCcEEEee--------cCcccHHHHhh--hcceecc------------cCCccC--CHHHHHHHHh-cCCeE
Q 022892 79 LEKVKIAYDIPIVTDV--------HETVQCEEVGK--VADIIQI------------PAFLCR--QTDLLVAAAK-TGKII 133 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~--------~d~~~~~~l~~--~~d~~kI------------gs~~~~--n~~lL~~~a~-~~~PV 133 (290)
+++.+ -+++++..+ ++++.+..+.+ ..+.+.| |..+.+ +.+.++++.+ +++||
T Consensus 113 vr~~a--p~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPV 190 (368)
T 3vkj_A 113 VRKVA--PTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPI 190 (368)
T ss_dssp HHHHC--SSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCE
T ss_pred HHHhC--cCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCE
Confidence 33221 233333321 22222222211 1222222 233333 6778888654 69999
Q ss_pred EEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-C-----------------------CCCCCCCCchhHHHHHh-
Q 022892 134 NIK-KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM-F-----------------------GYNDLIVDPRNLEWMRE- 187 (290)
Q Consensus 134 ils-tG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~-~-----------------------~y~~~~~dL~~i~~lk~- 187 (290)
++| .|...+.++.+.+ ...|-+-|.+--+|.. + ++.. --..++...++
T Consensus 191 ivK~vG~g~s~~~A~~l----~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~--pt~~~l~~v~~~ 264 (368)
T 3vkj_A 191 IVKESGNGISMETAKLL----YSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGV--PTAASIMEVRYS 264 (368)
T ss_dssp EEECSSSCCCHHHHHHH----HHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSC--BHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHH----HhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccc--cHHHHHHHHHHH
Confidence 999 5655577665544 4567665555333331 0 0000 01134555555
Q ss_pred c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChH----HHH
Q 022892 188 A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLR----NLE 262 (290)
Q Consensus 188 ~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~----~l~ 262 (290)
. ++||+.|..-.. | .. +..|+++||++++|=..+-.- +.. .++ .++
T Consensus 265 ~~~ipvia~GGI~~----------------~-----~d-~~kal~lGA~~v~ig~~~l~~--~~~-----G~~~v~~~l~ 315 (368)
T 3vkj_A 265 VPDSFLVGSGGIRS----------------G-----LD-AAKAIALGADIAGMALPVLKS--AIE-----GKESLEQFFR 315 (368)
T ss_dssp STTCEEEEESSCCS----------------H-----HH-HHHHHHHTCSEEEECHHHHHH--HHH-----CHHHHHHHHH
T ss_pred cCCCcEEEECCCCC----------------H-----HH-HHHHHHcCCCEEEEcHHHHHH--Hhc-----ChHHHHHHHH
Confidence 4 589988644221 2 23 445688999999997654110 001 233 466
Q ss_pred HHHHHHHHHHHHhCCccc
Q 022892 263 ELLEELVAIAKVSKGKQR 280 (290)
Q Consensus 263 ~lv~~ir~~~~~lg~~~~ 280 (290)
.+.++++.+-..+|.+++
T Consensus 316 ~l~~eL~~~m~~~G~~~i 333 (368)
T 3vkj_A 316 KIIFELKAAMMLTGSKDV 333 (368)
T ss_dssp HHHHHHHHHHHHTTCCBH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 777778877777777544
No 48
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.52 E-value=0.018 Score=54.43 Aligned_cols=229 Identities=13% Similarity=0.053 Sum_probs=126.1
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC---Ccc------------cCCCCChhH
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT---SSK------------SFRGPGMVE 74 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt---s~~------------~~~g~~~~~ 74 (290)
.+...+|+.+=||+-.- | .++.+++-+ +|+-+|.-.+....||. .|- .|...|++.
T Consensus 43 Gl~~~NPv~lAAG~~~~-~----~e~~~~l~~----~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~ 113 (354)
T 4ef8_A 43 NNTFANPFMNAAGVMCT-T----TEELVAMTE----SASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDF 113 (354)
T ss_dssp TEEESSSEEECTTSSCS-S----HHHHHHHHH----SSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHH
T ss_pred CEECCCCCEeccCCCCC-C----HHHHHHHHH----cCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHH
Confidence 55567887666677631 2 345555554 46554333333322321 110 122334444
Q ss_pred HHHHHHHHHHhcCCcEEEeecC--cccHH----HHh---h-hcceecc--c------CCcc-CCHH----HHHHHH-hcC
Q 022892 75 GLKILEKVKIAYDIPIVTDVHE--TVQCE----EVG---K-VADIIQI--P------AFLC-RQTD----LLVAAA-KTG 130 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s~~~d--~~~~~----~l~---~-~~d~~kI--g------s~~~-~n~~----lL~~~a-~~~ 130 (290)
.++.+++..+..+.|++..++- +++.- .+. + .+|++-| + .+.+ .+.+ +++++- ..+
T Consensus 114 ~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~ 193 (354)
T 4ef8_A 114 YLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhC
Confidence 5555554433458899998864 33322 222 1 1344432 2 1222 4544 444443 368
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEE---------Ee--ecC-------CC-CCC---CCCCCchhHHHHHh
Q 022892 131 KIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMV---------CE--RGT-------MF-GYN---DLIVDPRNLEWMRE 187 (290)
Q Consensus 131 ~PVilstG~~~tl~e~~~Ave~i~~~G-n~~i~L---------~~--~gs-------~~-~y~---~~~~dL~~i~~lk~ 187 (290)
+||.+|.....+.+++..+++.+.+.| -.-|++ ++ +.+ .+ +|. -..++++.+..+++
T Consensus 194 ~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~ 273 (354)
T 4ef8_A 194 HSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYR 273 (354)
T ss_dssp SCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHH
Confidence 999999999889999999999888776 443433 11 110 00 111 11356778888887
Q ss_pred -c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHH
Q 022892 188 -A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 265 (290)
Q Consensus 188 -~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv 265 (290)
. ++||+.+..=. . ..-+..++.+||++++|=+-+-- ++ |.-++++.
T Consensus 274 ~~~~ipII~~GGI~--------------------s--~~da~~~l~aGAd~V~vgra~l~-----~G-----P~~~~~i~ 321 (354)
T 4ef8_A 274 RCPGKLIFGCGGVY--------------------T--GEDAFLHVLAGASMVQVGTALQE-----EG-----PSIFERLT 321 (354)
T ss_dssp HCTTSEEEEESCCC--------------------S--HHHHHHHHHHTEEEEEECHHHHH-----HC-----TTHHHHHH
T ss_pred hCCCCCEEEECCcC--------------------C--HHHHHHHHHcCCCEEEEhHHHHH-----hC-----HHHHHHHH
Confidence 5 69998743311 1 23345567789999988775421 21 45677787
Q ss_pred HHHHHHHHHhCCcc
Q 022892 266 EELVAIAKVSKGKQ 279 (290)
Q Consensus 266 ~~ir~~~~~lg~~~ 279 (290)
+.+++.-...|-++
T Consensus 322 ~~l~~~m~~~G~~s 335 (354)
T 4ef8_A 322 SELLGVMAKKRYQT 335 (354)
T ss_dssp HHHHHHHHHHTCCS
T ss_pred HHHHHHHHHcCCCC
Confidence 77776655555433
No 49
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.51 E-value=0.072 Score=49.57 Aligned_cols=158 Identities=16% Similarity=0.152 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccC-C--CCChhHHHH----HHHHHHHhcCCcEEEeecCcccH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSF-R--GPGMVEGLK----ILEKVKIAYDIPIVTDVHETVQC 100 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~-~--g~~~~~~l~----~L~~~~~~~Gi~~~s~~~d~~~~ 100 (290)
+.+.+++.|+++++ .||+++=-.... |.|++- + ....++.++ .++.+.++.++|+.-+-++++.+
T Consensus 47 ~~~~al~~A~~~v~----~GAdIIDIGgeS----TrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va 118 (314)
T 3tr9_A 47 DLNSALRTAEKMVD----EGADILDIGGEA----TNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVM 118 (314)
T ss_dssp SHHHHHHHHHHHHH----TTCSEEEEECCC----SCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEECCCC----CCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHH
Confidence 56788888988888 499988765433 222211 0 111123333 34455566799999999999999
Q ss_pred HHHhh-hccee-cccCCccCCHHHHHHHHhcCCeEEEeCCCC--CC-------------HHHHHHHHHHHHHcCCC-cEE
Q 022892 101 EEVGK-VADII-QIPAFLCRQTDLLVAAAKTGKIINIKKGQF--CA-------------SSVMVNSAEKVRLAGNP-NVM 162 (290)
Q Consensus 101 ~~l~~-~~d~~-kIgs~~~~n~~lL~~~a~~~~PVilstG~~--~t-------------l~e~~~Ave~i~~~Gn~-~i~ 162 (290)
+...+ .++++ -|.+.. ...++..+++.+.||++-.-.. .| .+...+.++.+.+.|-+ +=+
T Consensus 119 ~aAl~aGa~iINDVsg~~--~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~I 196 (314)
T 3tr9_A 119 REAVNTGADMINDQRALQ--LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRI 196 (314)
T ss_dssp HHHHHHTCCEEEETTTTC--STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHcCCCEEEECCCCC--chHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHE
Confidence 88766 56655 444444 2367888999999999965322 12 45555667778888865 235
Q ss_pred EEeecCC---CCCCCCCCCc---hhHHHHHhcCCCEEEeC
Q 022892 163 VCERGTM---FGYNDLIVDP---RNLEWMREANCPVVADV 196 (290)
Q Consensus 163 L~~~gs~---~~y~~~~~dL---~~i~~lk~~~~pV~~D~ 196 (290)
++..|.. |+-.. .-|+ +.+..++.+++||.+-.
T Consensus 197 ilDPG~G~~~F~Kt~-~~n~~lL~~l~~l~~lg~PvL~G~ 235 (314)
T 3tr9_A 197 IIDPGFGQGNYGKNV-SENFYLLNKLPEFVAMGLPVLSGW 235 (314)
T ss_dssp EEECCCCSGGGCCCH-HHHHHHHHTTHHHHTTSSCBEECC
T ss_pred EEeCCCCchhhcCCH-HHHHHHHHHHHHHhcCCCCEEEEe
Confidence 5788764 43211 1133 34444445789987733
No 50
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=96.48 E-value=0.052 Score=52.37 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=128.4
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC---Ccc--------------cCCCCCh
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT---SSK--------------SFRGPGM 72 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt---s~~--------------~~~g~~~ 72 (290)
.+...+|+.+=||+.- |- +....|. ++|+.+|--.+.+..||. .|- .|+..|+
T Consensus 90 Gl~f~NPvglAAG~dk--~~----~~~~~l~----~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~ 159 (415)
T 3i65_A 90 HLDFINPFGVAAGFDK--NG----VCIDSIL----KLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGC 159 (415)
T ss_dssp TEEESSSEEECTTSST--TC----SSHHHHH----TTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCH
T ss_pred CEECCCCCEECCCCCC--CH----HHHHHHH----HcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhH
Confidence 4556777777677754 32 2223333 469876655555533332 111 1333344
Q ss_pred hHHHHHHHHHHHhc-------CCcEEEeecCcc-----cHHH------Hhhhcceecc--------cCCccCCHHHH---
Q 022892 73 VEGLKILEKVKIAY-------DIPIVTDVHETV-----QCEE------VGKVADIIQI--------PAFLCRQTDLL--- 123 (290)
Q Consensus 73 ~~~l~~L~~~~~~~-------Gi~~~s~~~d~~-----~~~~------l~~~~d~~kI--------gs~~~~n~~lL--- 123 (290)
+..++.+++..++. +.++...+.-.. .-|| +.+++|++-| |.+.+++.+.|
T Consensus 160 d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~l 239 (415)
T 3i65_A 160 DKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNI 239 (415)
T ss_dssp HHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHH
Confidence 45556666655443 456666665432 1222 2334666543 34455555443
Q ss_pred -HHHHh---------------------cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC----------
Q 022892 124 -VAAAK---------------------TGKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF---------- 170 (290)
Q Consensus 124 -~~~a~---------------------~~~P-VilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~---------- 170 (290)
+++-+ ..+| |++|-....+.+++.+.++.+.+.|-+-|++.-++...
T Consensus 240 l~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~ 319 (415)
T 3i65_A 240 ILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKK 319 (415)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCC
T ss_pred HHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccccccccccccc
Confidence 33322 2689 99999998888899999999999998766665544310
Q ss_pred -CCCC---CCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 171 -GYND---LIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 171 -~y~~---~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+|.- ....++.+..+++ . .+||+.+..=. . ..-+..++.+||++++|=+-+
T Consensus 320 GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~----------------s------~eDa~e~l~aGAd~VqIgra~ 377 (415)
T 3i65_A 320 GGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF----------------S------GLDALEKIEAGASVCQLYSCL 377 (415)
T ss_dssp SEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC----------------S------HHHHHHHHHHTEEEEEESHHH
T ss_pred CCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC----------------C------HHHHHHHHHcCCCEEEEcHHH
Confidence 0100 0123466777777 5 69998743211 1 334556778999998887654
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCccccc
Q 022892 244 DPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMN 282 (290)
Q Consensus 244 t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~~~~~ 282 (290)
-- + .|.-++++.+.+++.-...|-+++-+
T Consensus 378 l~-----~-----GP~~~~~i~~~L~~~l~~~G~~si~e 406 (415)
T 3i65_A 378 VF-----N-----GMKSAVQIKRELNHLLYQRGYYNLKE 406 (415)
T ss_dssp HH-----H-----GGGHHHHHHHHHHHHHHHTTCSSSTT
T ss_pred Hh-----c-----CHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 11 1 25567888888777666666555443
No 51
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=96.47 E-value=0.086 Score=48.96 Aligned_cols=160 Identities=15% Similarity=0.174 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH----HHHHHHhcCCcEEEeecCcccHHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI----LEKVKIAYDIPIVTDVHETVQCEEV 103 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~----L~~~~~~~Gi~~~s~~~d~~~~~~l 103 (290)
+.+.+++.|+++++ .||++|=-.... |.|++ .....++.++. ++.+.++.++++.-+-++++.++..
T Consensus 31 ~~~~a~~~a~~~v~----~GAdIIDIGgeS----TrPGa-~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~Va~aA 101 (314)
T 2vef_A 31 ALEQALQQARKLIA----EGASMLDIGGES----TRPGS-SYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAA 101 (314)
T ss_dssp HHHHHHHHHHHHHH----TTCSEEEEECCC----------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEECCCc----CCCCC-CCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHH
Confidence 35667778888877 599998766433 22221 00001233333 4445566799999999999999887
Q ss_pred hh-hcceec-ccCCccCCHHHHHHHHhcCCeEEEeCC--------------------CCCC-----------HHH-----
Q 022892 104 GK-VADIIQ-IPAFLCRQTDLLVAAAKTGKIINIKKG--------------------QFCA-----------SSV----- 145 (290)
Q Consensus 104 ~~-~~d~~k-Igs~~~~n~~lL~~~a~~~~PVilstG--------------------~~~t-----------l~e----- 145 (290)
.+ .++++- |.+.. ....++..+++.+.||++-.- +..+ ++|
T Consensus 102 l~aGa~iINDVsg~~-~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~ 180 (314)
T 2vef_A 102 LAAGADLVNDITGLM-GDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAF 180 (314)
T ss_dssp HHTTCCEEEETTTTC-SCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHH
T ss_pred HHcCCCEEEECCCCC-CChHHHHHHHHcCCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHH
Confidence 66 577663 54443 224677778999999999621 1112 444
Q ss_pred HHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCCCchhHHHHHh---cCCCEEEeCCC
Q 022892 146 MVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDPRNLEWMRE---ANCPVVADVTH 198 (290)
Q Consensus 146 ~~~Ave~i~~~Gn~-~i~L~~~gs~~~y~~~~~dL~~i~~lk~---~~~pV~~D~sH 198 (290)
....++.+.+.|-+ +=+++..|.-|+-.. .-|+..+..+++ +++||.+-.|.
T Consensus 181 l~~~i~~a~~~GI~~~~IilDPGiGF~kt~-~~nl~ll~~l~~l~~~g~PvL~G~Sr 236 (314)
T 2vef_A 181 FERALARAAEAGIAPENILLDPGIGFGLTK-KENLLLLRDLDKLHQKGYPIFLGVSR 236 (314)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCTTSSCCH-HHHHHHHHTHHHHHTTSSCBEEECSS
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCCcccch-HHHHHHHHHHHHhhcCCCCEEEEeCc
Confidence 34456677778853 335688886543322 124444444443 68998764443
No 52
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=96.41 E-value=0.4 Score=43.19 Aligned_cols=185 Identities=15% Similarity=0.059 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHh-cCCcEEEeecCcccHHHHhh-
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIA-YDIPIVTDVHETVQCEEVGK- 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~-~Gi~~~s~~~d~~~~~~l~~- 105 (290)
+.+..++.|+++++. |++++=-..-. .....++.++++....++ .++|+.-+-++++.++...+
T Consensus 23 ~~~~a~~~a~~~v~~----GAdiIDIg~g~----------~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a 88 (262)
T 1f6y_A 23 DPAPVQEWARRQEEG----GARALDLNVGP----------AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKK 88 (262)
T ss_dssp CHHHHHHHHHHHHHH----TCSEEEEBCC--------------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC----CCcEEEECCCC----------CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhh
Confidence 566778888888874 99987654310 011124566666655554 49999999999998888665
Q ss_pred --hcceec-ccCCccCCH-HHHHHHHhcCCeEEEeC----CCCCCHHHH----HHHHHHHHHcCCC-cEEEEeecCC-CC
Q 022892 106 --VADIIQ-IPAFLCRQT-DLLVAAAKTGKIINIKK----GQFCASSVM----VNSAEKVRLAGNP-NVMVCERGTM-FG 171 (290)
Q Consensus 106 --~~d~~k-Igs~~~~n~-~lL~~~a~~~~PVilst----G~~~tl~e~----~~Ave~i~~~Gn~-~i~L~~~gs~-~~ 171 (290)
..+++- |.+.. .+. .++..+++.+.||++-. |+.-|+++. ...++.+.+.|-+ +=+++..|.. ++
T Consensus 89 ~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g 167 (262)
T 1f6y_A 89 CKNRAMINSTNAER-EKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPAN 167 (262)
T ss_dssp CSSCEEEEEECSCH-HHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCTT
T ss_pred CCCCCEEEECCCCc-ccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCcCC
Confidence 355553 44442 332 67788899999999854 444355444 4556667777854 3477788874 33
Q ss_pred CCCC--CCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCC--CcccHH-HHHHHHHHcCCCEEEEeee
Q 022892 172 YNDL--IVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGG--LRELIP-CIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 172 y~~~--~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g--~~~~~~-~~a~aAva~GA~G~~IEkH 242 (290)
+... --.|+.+..+++ + ++|+.+-.| +.|.| .++.+. ..+..|++.|++..++-.|
T Consensus 168 ~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~S---------------rksfg~~~~~~l~~t~~~~a~~~g~~~~iv~~~ 231 (262)
T 1f6y_A 168 VAQDHAPEVLKTLQQIKMLADPAPKTVLGLS---------------NVSQNCQNRPLINRTFLAMAMACGLMSAIADAC 231 (262)
T ss_dssp TCTTHHHHHHHHHHHHHTCCSSCCEEEEEGG---------------GGGTTCSSHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCCEEEeec---------------CCcCCCCHHHHHHHHHHHHHHHHhCCeEEECcC
Confidence 3321 123566666777 6 899876222 12223 233333 3345567889985554333
No 53
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=96.40 E-value=0.28 Score=43.87 Aligned_cols=230 Identities=17% Similarity=0.129 Sum_probs=121.0
Q ss_pred CCchhhHHhhhcCC-CCeEEE-EccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcc---------cCCC
Q 022892 1 MDPSTALFNQLKAA-EPFFLL-AGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSK---------SFRG 69 (290)
Q Consensus 1 ~~~~~~~~~~i~~~-~~~~iI-Agpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~---------~~~g 69 (290)
|+.-...|...... ++.+|. .-+|.. +.+..++.++.|.+ .|+|++..+..-.+|..... .-.|
T Consensus 1 m~~~~~~f~~~~~~~~~~~i~~i~~g~p-~~~~~~~~~~~l~~----~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G 75 (262)
T 2ekc_A 1 MGRISDKFTELKEKREKALVSYLMVGYP-DYETSLKAFKEVLK----NGTDILEIGFPFSDPVADGPTIQVAHEVALKNG 75 (262)
T ss_dssp CCHHHHHHHHHHHHTBCEEEEEEETTSS-CHHHHHHHHHHHHH----TTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHhcCCceEEEEecCCCC-ChHHHHHHHHHHHH----cCCCEEEECCCCCCcccccHHHHHHHHHHHHcC
Confidence 33344566655432 332211 124443 67788888888888 59999988752212211000 0012
Q ss_pred CChhHHHHHHHHHHHhc-CCcEEEe-ecCc-------ccHHHHhh-hcceecccCCccCCH-HHHHHHHhcCCe-EEEeC
Q 022892 70 PGMVEGLKILEKVKIAY-DIPIVTD-VHET-------VQCEEVGK-VADIIQIPAFLCRQT-DLLVAAAKTGKI-INIKK 137 (290)
Q Consensus 70 ~~~~~~l~~L~~~~~~~-Gi~~~s~-~~d~-------~~~~~l~~-~~d~~kIgs~~~~n~-~lL~~~a~~~~P-Vilst 137 (290)
..+...+..++++.++. ++|+..- .+++ ..++.+.+ .+|.+-++.-..... .+.+.+-+.|.. |.+-+
T Consensus 76 ~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~ 155 (262)
T 2ekc_A 76 IRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGA 155 (262)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEEC
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 23345677788888887 8998873 3332 22333434 588777775443322 344445556665 44455
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CCCCCCC-C-CC-chhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCC
Q 022892 138 GQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MFGYNDL-I-VD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGG 212 (290)
Q Consensus 138 G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~~~y~~~-~-~d-L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~ 212 (290)
..+ +.+.+...++. +. ..+.+-... ..+.... . -+ ...+..+|+ .++||.++.-=+
T Consensus 156 p~t-~~~rl~~ia~~----a~-gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~------------- 216 (262)
T 2ekc_A 156 PTS-TRKRIKLICEA----AD-EMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVS------------- 216 (262)
T ss_dssp TTC-CHHHHHHHHHH----CS-SCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCC-------------
T ss_pred CCC-CHHHHHHHHHh----CC-CCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCC-------------
Confidence 444 55655554432 22 233332211 1122211 1 11 246677777 789987732211
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022892 213 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 213 ~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
. +..+.. +..||||+++=+.+.-.-. .+ +++.++++++.+++
T Consensus 217 ----t-----~e~~~~-~~~gADgvIVGSai~~~~~-~~-----~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 217 ----K-----KEHARE-IGSFADGVVVGSALVKLAG-QK-----KIEDLGNLVKELKE 258 (262)
T ss_dssp ----S-----HHHHHH-HHTTSSEEEECHHHHHHHH-TT-----CHHHHHHHHHHHHH
T ss_pred ----C-----HHHHHH-HHcCCCEEEECHHHHhhhh-hh-----hHHHHHHHHHHHHH
Confidence 1 333434 7889999999877642100 01 56788888888764
No 54
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.39 E-value=0.0044 Score=54.79 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d 108 (290)
..+.|+++.+ .|++.+.....+. . ...++ ..+..+++++++.++|++.. +.++++++.+.+ .+|
T Consensus 37 ~~~~a~~~~~----~G~~~i~v~d~~~---~--~~~~~----~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad 103 (247)
T 3tdn_A 37 LRDWVVEVEK----RGAGEILLTSIDR---D--GTKSG----YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGAD 103 (247)
T ss_dssp HHHHHHHHHH----TTCSEEEEEETTT---T--TCSSC----CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----cCCCEEEEEecCc---c--cCCCc----ccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCC
Confidence 5677777766 6999886543321 1 11111 23677888899999999885 778888887766 699
Q ss_pred eecccCCccCCHHHHHHHHh
Q 022892 109 IIQIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~ 128 (290)
.+-||+..+.|.++++++.+
T Consensus 104 ~V~ig~~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 104 KVSINTAAVENPSLITQIAQ 123 (247)
T ss_dssp EECCSHHHHHCTHHHHHHHH
T ss_pred eeehhhHHhhChHHHHHHHH
Confidence 99999999999887766543
No 55
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.38 E-value=0.086 Score=47.29 Aligned_cols=185 Identities=17% Similarity=0.118 Sum_probs=112.1
Q ss_pred hHHhhhcCCCCeEEEEccC--C-----ccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH
Q 022892 6 ALFNQLKAAEPFFLLAGPN--V-----IESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78 (290)
Q Consensus 6 ~~~~~i~~~~~~~iIAgpc--s-----ien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~ 78 (290)
.++..+... .+-+|||.. | |.. ....++|+...+ .|+.++.--+- +..|+| .+..
T Consensus 36 ~~~~al~~~-~~~~IaE~k~aSPskg~i~~-~~p~~~A~~~~~----~GA~~isvlt~-------~~~f~G-----~~~~ 97 (254)
T 1vc4_A 36 SFKEALLRP-GLSVIAEVKRQSPSEGLIRE-VDPVEAALAYAR----GGARAVSVLTE-------PHRFGG-----SLLD 97 (254)
T ss_dssp CHHHHHTSS-SCEEEEEECSCCTTTCCCCS-CCHHHHHHHHHH----TTCSEEEEECC-------CSSSCC-----CHHH
T ss_pred CHHHHHhhc-CCcEEeeecCCCcCCCcCCC-CCHHHHHHHHHH----cCCCEEEEecc-------hhhhcc-----CHHH
Confidence 566666533 478999885 2 211 224677777666 69998854321 122332 3556
Q ss_pred HHHHHHhcCCcEEEee--cCcccHHHHhh-hcceecccCCccCCHHH---HHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 79 LEKVKIAYDIPIVTDV--HETVQCEEVGK-VADIIQIPAFLCRQTDL---LVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~--~d~~~~~~l~~-~~d~~kIgs~~~~n~~l---L~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
|+.+++..++|+..-- .|+.+++.+.. .+|.+-+++..+. ..+ ++.+-..|+-+++... +.+|...|.+
T Consensus 98 l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~---~~~E~~~a~~- 172 (254)
T 1vc4_A 98 LKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALVEVH---TERELEIALE- 172 (254)
T ss_dssp HHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEEC---SHHHHHHHHH-
T ss_pred HHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHH-
Confidence 7777778999976643 45556666655 6999999888776 322 2223367888877765 7888876654
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-----CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 022892 153 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 226 (290)
Q Consensus 153 i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-----~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a 226 (290)
.|.+.+-+-.+. |....+|+.....|.+ . ++||+. .+ |... +.-.
T Consensus 173 ---~gad~IGvn~~~----l~~~~~dl~~~~~L~~~i~~~~~~~~vIA-eg-------------------GI~s--~~dv 223 (254)
T 1vc4_A 173 ---AGAEVLGINNRD----LATLHINLETAPRLGRLARKRGFGGVLVA-ES-------------------GYSR--KEEL 223 (254)
T ss_dssp ---HTCSEEEEESBC----TTTCCBCTTHHHHHHHHHHHTTCCSEEEE-ES-------------------CCCS--HHHH
T ss_pred ---cCCCEEEEcccc----CcCCCCCHHHHHHHHHhCccccCCCeEEE-Ec-------------------CCCC--HHHH
Confidence 355444444443 3344567777766655 3 677765 11 1100 2233
Q ss_pred HHHHHcCCCEEEEeeeC
Q 022892 227 RTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 227 ~aAva~GA~G~~IEkH~ 243 (290)
..... |++|+++=+-+
T Consensus 224 ~~l~~-Ga~gvlVGsAl 239 (254)
T 1vc4_A 224 KALEG-LFDAVLIGTSL 239 (254)
T ss_dssp HTTTT-TCSEEEECHHH
T ss_pred HHHHc-CCCEEEEeHHH
Confidence 34466 99999987765
No 56
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=96.31 E-value=0.58 Score=42.57 Aligned_cols=158 Identities=18% Similarity=0.184 Sum_probs=99.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHH---HHHHhcCCcEEEeecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILE---KVKIAYDIPIVTDVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~---~~~~~~Gi~~~s~~~d~~~~~~l~ 104 (290)
+.+.+++.|++|++. ||+++=-.... |.|++ .....++.++.+. +..++.++++-.+-+.++-++...
T Consensus 28 ~~~~a~~~a~~m~~~----GAdiIDIGgeS----TRPga-~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va~~al 98 (270)
T 4hb7_A 28 NVETAINRVKAMIDE----GADIIDVGGVS----TRPGH-EMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACL 98 (270)
T ss_dssp HHHHHHHHHHHHHHT----TCSEEEEESCC----CSTTC-CCCCHHHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC----CCCEEEECCcc----CCCCC-CCCchHHHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHH
Confidence 467788999999884 99998776544 33332 1222234444322 223457999999999999988876
Q ss_pred h-hcceec-ccCCccCCHHHHHHHHhcCCeEEEeCCCCCC------HHHH----HHHHHHHHHcCCC-cEEEEeecCCCC
Q 022892 105 K-VADIIQ-IPAFLCRQTDLLVAAAKTGKIINIKKGQFCA------SSVM----VNSAEKVRLAGNP-NVMVCERGTMFG 171 (290)
Q Consensus 105 ~-~~d~~k-Igs~~~~n~~lL~~~a~~~~PVilstG~~~t------l~e~----~~Ave~i~~~Gn~-~i~L~~~gs~~~ 171 (290)
+ .++++- |.+ ...+..+++.+++.+.|+++---.. + .+|+ .+-++.+...|-+ +=+++.-|.-|+
T Consensus 99 ~aGa~iINDVs~-g~~d~~m~~~va~~~~~~vlMH~~~-~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFg 176 (270)
T 4hb7_A 99 KLGVDMINDQWA-GLYDHRMFQIVAKYDAEIILMHNGN-GNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFA 176 (270)
T ss_dssp HHTCCEEEETTT-TSSCTHHHHHHHHTTCEEEEECCCS-SCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS
T ss_pred Hhccceeccccc-cccchhHHHHHHHcCCCeEEecccc-CCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcc
Confidence 6 688775 332 2345678899999999999963221 2 2333 3345566777853 346778887654
Q ss_pred CCCCCCCc---hhHHHHHhcCCCEEEeCC
Q 022892 172 YNDLIVDP---RNLEWMREANCPVVADVT 197 (290)
Q Consensus 172 y~~~~~dL---~~i~~lk~~~~pV~~D~s 197 (290)
=+. .=|+ +.+..++.+++||.+-.|
T Consensus 177 Kt~-~~N~~ll~~l~~~~~lg~PvLvG~S 204 (270)
T 4hb7_A 177 KTR-NEEAEVMARLDELVATEYPVLLATS 204 (270)
T ss_dssp CCH-HHHHHHHTCHHHHHTTCSCBEECCT
T ss_pred ccc-ccHHHHHhhHHHHhcCCCCEEEEec
Confidence 211 1233 445555557999877444
No 57
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=96.31 E-value=0.38 Score=44.25 Aligned_cols=189 Identities=18% Similarity=0.177 Sum_probs=110.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH----HHHHHHhcCCcEEEeecCcccHHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI----LEKVKIAYDIPIVTDVHETVQCEEV 103 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~----L~~~~~~~Gi~~~s~~~d~~~~~~l 103 (290)
+.+..++.|+++++ .||+++=-.... |.|++ .....++.++. ++.+.++ ++|+.-+-++++.++..
T Consensus 44 ~~~~a~~~a~~~v~----~GAdiIDIGgeS----TrPga-~~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~~~~Va~aA 113 (294)
T 2y5s_A 44 ARDDALRRAERMIA----EGADLLDIGGES----TRPGA-PPVPLDEELARVIPLVEALRPL-NVPLSIDTYKPAVMRAA 113 (294)
T ss_dssp CTTHHHHHHHHHHH----TTCSEEEEESSC----CSTTC-CCCCHHHHHHHHHHHHHHHGGG-CSCEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEECCCc----CCCCC-CCCCHHHHHHHHHHHHHHHhhC-CCeEEEECCCHHHHHHH
Confidence 34667888888887 599998766433 22221 11222344444 3333333 99999999999999887
Q ss_pred hh-hccee-cccCCccCCHHHHHHHHhcCCeEEEeC--CCCCC---------------HHHHHHHHHHHHHcCCC-cEEE
Q 022892 104 GK-VADII-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA---------------SSVMVNSAEKVRLAGNP-NVMV 163 (290)
Q Consensus 104 ~~-~~d~~-kIgs~~~~n~~lL~~~a~~~~PVilst--G~~~t---------------l~e~~~Ave~i~~~Gn~-~i~L 163 (290)
.+ ..+++ -|.+.. ...++..+++.+.||++.. |+..| .+.....++.+.+.|-+ +=++
T Consensus 114 l~aGa~iINdVsg~~--d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Ii 191 (294)
T 2y5s_A 114 LAAGADLINDIWGFR--QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERIC 191 (294)
T ss_dssp HHHTCSEEEETTTTC--STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHcCCCEEEECCCCC--chHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 66 56766 454444 4467888999999999955 22212 45566677778888855 2366
Q ss_pred EeecCCCCCCCCCCCchhHHH---HH-----hcCCCEEEeCCCC------CCCCCCCccCCCCccCCC-CcccH-HHHHH
Q 022892 164 CERGTMFGYNDLIVDPRNLEW---MR-----EANCPVVADVTHS------LQQPAGKKLDGGGVASGG-LRELI-PCIAR 227 (290)
Q Consensus 164 ~~~gs~~~y~~~~~dL~~i~~---lk-----~~~~pV~~D~sHs------~~~~~~~~~~~~~~~~~g-~~~~~-~~~a~ 227 (290)
+..|..|.-....-|+..+.. ++ .+++|+.+-.|.- .+.| .. .|... ...+.
T Consensus 192 lDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~g~~------------~~~~R~~~t~a~~~ 259 (294)
T 2y5s_A 192 VDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGK------------PPLERVAASVAAAL 259 (294)
T ss_dssp EECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHHTTTTSC------------CGGGCHHHHHHHHH
T ss_pred EeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhhhhcCCC------------chhhhhHHHHHHHH
Confidence 678865432110123333333 34 2468876644431 0001 01 22222 22334
Q ss_pred HHHHcCCCEEEEeee
Q 022892 228 TAIAVGVDGVFMEVH 242 (290)
Q Consensus 228 aAva~GA~G~~IEkH 242 (290)
.|+..||+ +|=.|
T Consensus 260 ~a~~~Ga~--IvrvH 272 (294)
T 2y5s_A 260 CAVERGAA--IVRVH 272 (294)
T ss_dssp HHHHTTCS--EEEES
T ss_pred HHHHcCCc--EEEcC
Confidence 56788998 88889
No 58
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=96.27 E-value=0.19 Score=46.55 Aligned_cols=171 Identities=11% Similarity=0.061 Sum_probs=108.4
Q ss_pred CCCeEEEEccCCccC----H----------HHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHH
Q 022892 14 AEPFFLLAGPNVIES----E----------EHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKIL 79 (290)
Q Consensus 14 ~~~~~iIAgpcsien----~----------~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L 79 (290)
-+|+.|+.|+.-+-. . +...+.|+++++ .|+|+|--..-. |.|+.+. ...++.++.+
T Consensus 44 ~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~----~GAdiIDIg~~S----trP~~~~-vs~eee~~vV 114 (310)
T 2h9a_B 44 PNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVE----YGADIVALRLVS----AHPDGQN-RSGAELAEVC 114 (310)
T ss_dssp CSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHH----TTCSEEEEECGG----GCTTTTC-CCHHHHHHHH
T ss_pred CCCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHH----cCCcEEEEeCcc----CCCCCCC-CCHHHHHHHH
Confidence 456676777654311 1 234566666664 699997665432 2333221 1224666677
Q ss_pred HHHHHhcCCcEEE-ee----cCcccHHHHhh-hcc---e-ecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 022892 80 EKVKIAYDIPIVT-DV----HETVQCEEVGK-VAD---I-IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 80 ~~~~~~~Gi~~~s-~~----~d~~~~~~l~~-~~d---~-~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A 149 (290)
+.+.+..++|+.- +- ++++.++...+ ..+ + .-|-.. +...++..+++.+.||++..-. +++...+.
T Consensus 115 ~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~--~~~~~~~~aa~~g~~vv~m~~~--dv~~l~~~ 190 (310)
T 2h9a_B 115 KAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD--NYKPIVATCMVHGHSVVASAPL--DINLSKQL 190 (310)
T ss_dssp HHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT--THHHHHHHHHHHTCEEEEECSS--CHHHHHHH
T ss_pred HHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC--ccHHHHHHHHHhCCCEEEEChh--HHHHHHHH
Confidence 7888888999988 88 88888877666 454 3 344433 3346777788999999997632 58888888
Q ss_pred HHHHHHcCCC-cEEEEeecCC-CCCCCC--CCCchhHHH--HH---hcCCCEEEeCC
Q 022892 150 AEKVRLAGNP-NVMVCERGTM-FGYNDL--IVDPRNLEW--MR---EANCPVVADVT 197 (290)
Q Consensus 150 ve~i~~~Gn~-~i~L~~~gs~-~~y~~~--~~dL~~i~~--lk---~~~~pV~~D~s 197 (290)
++.+.+.|-+ +=+++..|.. ++|..+ .-|+..+.. |. .+++|+.+-.|
T Consensus 191 ~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~S 247 (310)
T 2h9a_B 191 NIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCFIG 247 (310)
T ss_dssp HHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECHH
T ss_pred HHHHHHCCCChhhEEEeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEcc
Confidence 9999888853 3477888876 354321 123444544 32 26899877443
No 59
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.24 E-value=0.15 Score=45.51 Aligned_cols=181 Identities=10% Similarity=0.076 Sum_probs=105.4
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcc-cCCCCC---hhHHHHHHHHHHHhcCCcE
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSK-SFRGPG---MVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~-~~~g~~---~~~~l~~L~~~~~~~Gi~~ 90 (290)
-++|+|..+.. .....++..+++.+ .|+.+|-.- +| . .+.. .|..+. +.+..+.++++|+++|+++
T Consensus 30 ~~lylIt~~~~--~~~~~~~~~~~al~----~Gv~~vqlR--~K-~-~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~l 99 (243)
T 3o63_A 30 ARLYLCTDARR--ERGDLAQFAEAALA----GGVDIIQLR--DK-G-SPGELRFGPLQARDELAACEILADAAHRYGALF 99 (243)
T ss_dssp CCEEEEECCCT--TTCCHHHHHHHHHH----TTCSEEEEC--CT-T-CHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CcEEEEECCCc--ccchHHHHHHHHHH----CCCCEEEEc--cC-C-CCccccccCCCHHHHHHHHHHHHHHHHhhCCEE
Confidence 46899987753 21224555555544 688766431 22 1 0000 000011 1234567899999999999
Q ss_pred EEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 91 VTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 91 ~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
+.. +.++...+ .+|-+-+|..++.... ++..-..++.|.+|.. |++|+..|.+ .|-+.|.+-..
T Consensus 100 iIn----d~~~lA~~~gAdGVHLg~~dl~~~~-~r~~~~~~~~iG~S~h---t~~Ea~~A~~----~GaDyI~vgpv--- 164 (243)
T 3o63_A 100 AVN----DRADIARAAGADVLHLGQRDLPVNV-ARQILAPDTLIGRSTH---DPDQVAAAAA----GDADYFCVGPC--- 164 (243)
T ss_dssp EEE----SCHHHHHHHTCSEEEECTTSSCHHH-HHHHSCTTCEEEEEEC---SHHHHHHHHH----SSCSEEEECCS---
T ss_pred EEe----CHHHHHHHhCCCEEEecCCcCCHHH-HHHhhCCCCEEEEeCC---CHHHHHHHhh----CCCCEEEEcCc---
Confidence 885 23444445 5888999999886543 3555556788888873 8999887754 56655555221
Q ss_pred CCCCC----CCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 170 FGYND----LIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 170 ~~y~~----~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
|+.+. ..+.+..+..+++ . ++||+... |.. +.-.....+.||+|+.+=+-
T Consensus 165 f~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiG--------------------GI~---~~ni~~~~~aGa~gvav~sa 221 (243)
T 3o63_A 165 WPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIG--------------------GIN---AQRLPAVLDAGARRIVVVRA 221 (243)
T ss_dssp SCCCC-----CCCHHHHHHHHTC---CCCEEEES--------------------SCC---TTTHHHHHHTTCCCEEESHH
T ss_pred cCCCCCCCcchhhHHHHHHHHHhccCCCCEEEec--------------------CCC---HHHHHHHHHcCCCEEEEeHH
Confidence 21111 1356667777765 2 78987631 110 11133557889999988776
Q ss_pred C
Q 022892 243 D 243 (290)
Q Consensus 243 ~ 243 (290)
+
T Consensus 222 i 222 (243)
T 3o63_A 222 I 222 (243)
T ss_dssp H
T ss_pred H
Confidence 5
No 60
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=96.21 E-value=0.6 Score=41.29 Aligned_cols=183 Identities=13% Similarity=0.066 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC-Ccc--------cCCCCChhHHHHHHHHHHHhcCCcEEEee-cCc
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT-SSK--------SFRGPGMVEGLKILEKVKIAYDIPIVTDV-HET 97 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt-s~~--------~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~-~d~ 97 (290)
+.+...+.+++|.+ .|+|++-.+..-.+|-- .+. .-.|..+...+..++++++..++|+..-. +++
T Consensus 30 ~~~~~~~~~~~l~~----~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~ 105 (262)
T 1rd5_A 30 DLATTAEALRLLDG----CGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKP 105 (262)
T ss_dssp CHHHHHHHHHHHHH----TTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcH
Confidence 44666777777766 69999876531111210 000 01233345667778888878899986532 222
Q ss_pred ---ccHHHHhh-hcceecccCCccCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC
Q 022892 98 ---VQCEEVGK-VADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGY 172 (290)
Q Consensus 98 ---~~~~~l~~-~~d~~kIgs~~~~n~-~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y 172 (290)
..++.+.+ .+|.+-++-...... .+++.+.+.|+++++--...-+.+.+....+ .+. ..+.+... ++|
T Consensus 106 ~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~----~~~-g~v~~~s~--~G~ 178 (262)
T 1rd5_A 106 IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITK----ASE-GFVYLVSV--NGV 178 (262)
T ss_dssp HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHH----HCC-SCEEEECS--SCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHh----cCC-CeEEEecC--CCC
Confidence 12333444 688777764444333 4556666678775554444414444443332 233 23443322 222
Q ss_pred CC---C--CCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 173 ND---L--IVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 173 ~~---~--~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
.- . ...+..+..+++ .++||.++.-=+ . +.-+....++||+|+++=+-+
T Consensus 179 tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~-----------------~-----~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 179 TGPRANVNPRVESLIQEVKKVTNKPVAVGFGIS-----------------K-----PEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp BCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCC-----------------S-----HHHHHHHHHTTCSEEEECHHH
T ss_pred CCCCcCCCchHHHHHHHHHhhcCCeEEEECCcC-----------------C-----HHHHHHHHHcCCCEEEEChHH
Confidence 11 1 112345666777 689998742211 1 334555677899999988765
No 61
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.19 E-value=0.7 Score=41.87 Aligned_cols=208 Identities=14% Similarity=0.104 Sum_probs=114.6
Q ss_pred CchhhHHhhhcCCCCeEEEEccCC-ccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcc----c-----CCCCC
Q 022892 2 DPSTALFNQLKAAEPFFLLAGPNV-IESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSK----S-----FRGPG 71 (290)
Q Consensus 2 ~~~~~~~~~i~~~~~~~iIAgpcs-ien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~----~-----~~g~~ 71 (290)
..-...|......++..+|.=... --|.+..++.++.|.+ .|+|+|-.+....+|-.... + -.|..
T Consensus 5 ~ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~----~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~ 80 (271)
T 3nav_A 5 NRYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLID----AGADALELGMPFSDPLADGPTIQGANLRALAAKTT 80 (271)
T ss_dssp CHHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHH----TTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHH----cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCC
Confidence 334566777665444333332111 1156778888888877 59999887753222321000 0 12333
Q ss_pred hhHHHHHHHHHHHh-cCCcEEE-eecCc---c----cHHHHhh-hcceecccCCccC-CHHHHHHHHhcCC-eEEEeCCC
Q 022892 72 MVEGLKILEKVKIA-YDIPIVT-DVHET---V----QCEEVGK-VADIIQIPAFLCR-QTDLLVAAAKTGK-IINIKKGQ 139 (290)
Q Consensus 72 ~~~~l~~L~~~~~~-~Gi~~~s-~~~d~---~----~~~~l~~-~~d~~kIgs~~~~-n~~lL~~~a~~~~-PVilstG~ 139 (290)
+.+.++.++++.++ ..+|++- +-+++ . -++.+.+ .+|-+-|+---.. -.++.+.+.+.|. +|.|-+..
T Consensus 81 ~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~ 160 (271)
T 3nav_A 81 PDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPT 160 (271)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 44668888888877 6888854 33332 1 1233333 4888877754443 3356666667787 46677776
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCC---CCCCC-CCC-chhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 140 FCASSVMVNSAEKVRLAGNPNVMVCERGTMF---GYNDL-IVD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 140 ~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~---~y~~~-~~d-L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
+ +.+.+...++ .+.. .+- |+|.. +.... .-+ ...+..+|+ .++||++.- ++
T Consensus 161 t-~~eri~~i~~----~~~g-fiY--~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGf--GI------------- 217 (271)
T 3nav_A 161 A-SDETLRAVAQ----LGKG-YTY--LLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGF--GI------------- 217 (271)
T ss_dssp C-CHHHHHHHHH----HCCS-CEE--ECCCC--------CCHHHHHHHHHHHHTTCCCEEECS--SC-------------
T ss_pred C-CHHHHHHHHH----HCCC-eEE--EEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEEC--CC-------------
Confidence 6 7666665544 2322 222 22221 11111 111 244666777 789998721 11
Q ss_pred cCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 214 ASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 214 ~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
.. +..+..+++.||||+|+=+.+
T Consensus 218 --st-----~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 218 --SE-----PAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp --CS-----HHHHHHHHHTTCSEEEESHHH
T ss_pred --CC-----HHHHHHHHHcCCCEEEECHHH
Confidence 12 455666789999999997765
No 62
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.18 E-value=0.012 Score=51.63 Aligned_cols=183 Identities=14% Similarity=0.121 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
..++|+++.+ .|++++-...... . +.+.+ ..++.+++++ +.++|++. -+.++++++.+.+ .+|
T Consensus 32 ~~~~a~~~~~----~Gad~i~v~d~~~---~----~~~~~--~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad 97 (241)
T 1qo2_A 32 PVELVEKLIE----EGFTLIHVVDLSN---A----IENSG--ENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYR 97 (241)
T ss_dssp HHHHHHHHHH----TTCCCEEEEEHHH---H----HHCCC--TTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCC
T ss_pred HHHHHHHHHH----cCCCEEEEecccc---c----ccCCc--hhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCC
Confidence 5777877776 6998876532211 0 11111 2367778888 88999987 4566666776655 699
Q ss_pred eecccCCccCCHHHHHHHHhcCCeE--EEeCC------------CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-CC
Q 022892 109 IIQIPAFLCRQTDLLVAAAKTGKII--NIKKG------------QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-YN 173 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~~~~PV--ilstG------------~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~-y~ 173 (290)
.+.+|+..+.|.++++.+...+..+ .++.. ...+..|+... +...|-..+.+ +..+.-+ +.
T Consensus 98 ~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~---~~~~G~~~i~~-t~~~~~g~~~ 173 (241)
T 1qo2_A 98 RQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKR---LKEYGLEEIVH-TEIEKDGTLQ 173 (241)
T ss_dssp EEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHH---HHTTTCCEEEE-EETTHHHHTC
T ss_pred EEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHH---HHhCCCCEEEE-EeecccccCC
Confidence 9999999999988887774344333 34331 01155565432 23456554444 4432111 21
Q ss_pred CCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc-----C-CCEEEEeeeCCCC
Q 022892 174 DLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV-----G-VDGVFMEVHDDPL 246 (290)
Q Consensus 174 ~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~-----G-A~G~~IEkH~t~d 246 (290)
-.|+..+..+++ .++||+....-+ . +.-+...... | |+|+++=+-+
T Consensus 174 --g~~~~~i~~l~~~~~iPvia~GGI~-----------------~-----~~d~~~~~~~~~~~~G~adgv~vgsal--- 226 (241)
T 1qo2_A 174 --EHDFSLTKKIAIEAEVKVLAAGGIS-----------------S-----ENSLKTAQKVHTETNGLLKGVIVGRAF--- 226 (241)
T ss_dssp --CCCHHHHHHHHHHHTCEEEEESSCC-----------------S-----HHHHHHHHHHHHHTTTSEEEEEECHHH---
T ss_pred --cCCHHHHHHHHHhcCCcEEEECCCC-----------------C-----HHHHHHHHhcccccCCeEeEEEeeHHH---
Confidence 247888888888 799998732211 1 2233344555 9 9999998876
Q ss_pred CCCCCCCCCCChHHHHHH
Q 022892 247 NAPVDGPTQWPLRNLEEL 264 (290)
Q Consensus 247 ka~~D~~~sl~p~~l~~l 264 (290)
+...++++++.+.
T Consensus 227 -----~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 227 -----LEGILTVEVMKRY 239 (241)
T ss_dssp -----HTTSSCHHHHHHH
T ss_pred -----HcCCCCHHHHHHH
Confidence 3445566665543
No 63
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.10 E-value=0.14 Score=46.65 Aligned_cols=128 Identities=13% Similarity=-0.031 Sum_probs=79.1
Q ss_pred HHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEEEeecC---------C---------C-CCCCC---C
Q 022892 121 DLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMVCERGT---------M---------F-GYNDL---I 176 (290)
Q Consensus 121 ~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~~~G-n~~i~L~~~gs---------~---------~-~y~~~---~ 176 (290)
++++++-+ .++||++|.....+.+++...++.+.+.| -+-|++..++. . + +|... .
T Consensus 150 ~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p 229 (314)
T 2e6f_A 150 TYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILP 229 (314)
T ss_dssp HHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHH
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccH
Confidence 35555543 48999999887778889998888888888 54444332220 0 0 00000 1
Q ss_pred CCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCC
Q 022892 177 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 254 (290)
Q Consensus 177 ~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~ 254 (290)
..+..+..+++ . ++||+....=. . ..-+..++++||++++|=+-+--
T Consensus 230 ~~~~~i~~v~~~~~~ipvi~~GGI~-----------------~-----~~da~~~l~~GAd~V~ig~~~l~--------- 278 (314)
T 2e6f_A 230 TALANVNAFYRRCPDKLVFGCGGVY-----------------S-----GEDAFLHILAGASMVQVGTALQE--------- 278 (314)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESSCC-----------------S-----HHHHHHHHHHTCSSEEECHHHHH---------
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEEchhhHh---------
Confidence 23566777777 6 89998742211 1 33455667889999988766521
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCccc
Q 022892 255 QWPLRNLEELLEELVAIAKVSKGKQR 280 (290)
Q Consensus 255 sl~p~~l~~lv~~ir~~~~~lg~~~~ 280 (290)
-+|.-++++.+.++..-...|-+++
T Consensus 279 -~~p~~~~~i~~~l~~~~~~~g~~~i 303 (314)
T 2e6f_A 279 -EGPGIFTRLEDELLEIMARKGYRTL 303 (314)
T ss_dssp -HCTTHHHHHHHHHHHHHHHHTCCSS
T ss_pred -cCcHHHHHHHHHHHHHHHHcCCCCH
Confidence 1345777888777776666665544
No 64
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=96.08 E-value=0.14 Score=47.85 Aligned_cols=171 Identities=13% Similarity=0.083 Sum_probs=106.9
Q ss_pred CCCeEEEEccCCccC-------------HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHH
Q 022892 14 AEPFFLLAGPNVIES-------------EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILE 80 (290)
Q Consensus 14 ~~~~~iIAgpcsien-------------~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~ 80 (290)
-+|+.+..+++-+.. .+...+.|++++ ++.|+|+|--.... |.|+ ......++-.+.++
T Consensus 51 ~n~p~iam~V~D~~pe~~~~v~~~~~~~~~~~~~~A~~~v---~~~GAdiIDIg~eS----trP~-~~~vs~ee~~~~V~ 122 (323)
T 4djd_D 51 VNRPVIGMEVQDIVPDWPDVLKDPFTDVINEPGRWAQKCV---AEYGADLIYLKLDG----ADPE-GANHSVDQCVATVK 122 (323)
T ss_dssp CSCCEEEEEEESSCCSCCHHHHGGGTTTTTCHHHHHHHHH---HTTCCSEEEEECGG----GCTT-TTCCCHHHHHHHHH
T ss_pred CCCCeEEEEEecCCccchhhHHHHHHHHHHhHHHHHHHHH---HHcCCCEEEEcCcc----CCCC-CCCCCHHHHHHHHH
Confidence 455666666655321 244677777777 35799987664333 2222 11122234555677
Q ss_pred HHHHhcCCcEEEe-----ecCcccHHHHhh-hcce-ecccCCccCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 81 KVKIAYDIPIVTD-----VHETVQCEEVGK-VADI-IQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 81 ~~~~~~Gi~~~s~-----~~d~~~~~~l~~-~~d~-~kIgs~~~~n-~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
++.+..++|+.-+ -++++.++...+ ..+. --|.|-.-.| ..++..+++.+.||++.... +++...+.++.
T Consensus 123 ~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~--d~~~~~~l~~~ 200 (323)
T 4djd_D 123 EVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIARSPL--DINICKQLNIL 200 (323)
T ss_dssp HHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSS--CHHHHHHHHHH
T ss_pred HHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEEccc--hHHHHHHHHHH
Confidence 7778899999999 999988888766 3331 1222222223 46778888999999998743 57777888888
Q ss_pred HHHcCCC-cEEEEeecCC-CCCCCCCCCchhHHHHH--------hcCCCEEEe
Q 022892 153 VRLAGNP-NVMVCERGTM-FGYNDLIVDPRNLEWMR--------EANCPVVAD 195 (290)
Q Consensus 153 i~~~Gn~-~i~L~~~gs~-~~y~~~~~dL~~i~~lk--------~~~~pV~~D 195 (290)
+.+.|-+ +=+++..|.. +++..+ -++..+..++ .+++||++-
T Consensus 201 a~~~GI~~e~IIlDPg~g~fgk~~e-~~l~~l~~ir~~al~~~~~lg~PvL~G 252 (323)
T 4djd_D 201 INEMNLPLDHIVIDPSIGGLGYGIE-YSFSIMERIRLGALQGDKMLSMPVICT 252 (323)
T ss_dssp HHTTTCCGGGEEEECCCCCTTTTHH-HHHHHHHHHHHHHHHTCGGGCSCBEEE
T ss_pred HHHcCCCHHHEEEeCCCccccCCHH-HHHHHHHHHHHHhhcccccCCCCEEEe
Confidence 8888852 2366788875 455332 2444444443 278998774
No 65
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.05 E-value=0.46 Score=42.98 Aligned_cols=207 Identities=17% Similarity=0.105 Sum_probs=113.7
Q ss_pred hhHHhhhcCCCCeEEEEccCCc-cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcc----c-----CCCCChhH
Q 022892 5 TALFNQLKAAEPFFLLAGPNVI-ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSK----S-----FRGPGMVE 74 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpcsi-en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~----~-----~~g~~~~~ 74 (290)
...|......++..+|.=..+- -|.+...+.++.|.+ .|+|++-.+....+|--... . -.|..+..
T Consensus 6 ~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~----~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~ 81 (267)
T 3vnd_A 6 QAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVD----NGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSD 81 (267)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHH----TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHH----cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHH
Confidence 4566666544443333322211 145777788877777 69999887743222321100 0 02333345
Q ss_pred HHHHHHHHHHh-cCCcEEEe-ecCc-------ccHHHHhh-hcceecccCCccC-CHHHHHHHHhcCCe-EEEeCCCCCC
Q 022892 75 GLKILEKVKIA-YDIPIVTD-VHET-------VQCEEVGK-VADIIQIPAFLCR-QTDLLVAAAKTGKI-INIKKGQFCA 142 (290)
Q Consensus 75 ~l~~L~~~~~~-~Gi~~~s~-~~d~-------~~~~~l~~-~~d~~kIgs~~~~-n~~lL~~~a~~~~P-VilstG~~~t 142 (290)
.+..++++.++ ..+|++-- -+++ .-++.+.+ .+|.+-|+---.. -.++.+.+.+.|.. |.+-+..+ +
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t-~ 160 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNA-D 160 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTC-C
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCC-C
Confidence 68888888877 78887653 3354 12333334 5888888755443 33566667777874 55777766 7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEE-eecCCCCCCC-CCC-CchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCC
Q 022892 143 SSVMVNSAEKVRLAGNPNVMVC-ERGTMFGYND-LIV-DPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGL 218 (290)
Q Consensus 143 l~e~~~Ave~i~~~Gn~~i~L~-~~gs~~~y~~-~~~-dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~ 218 (290)
.+.+...++ .+..-+.++ ..|+ .+... ..- ....+..+|+ .++||.++.-=+ .
T Consensus 161 ~eri~~i~~----~~~gfvY~vS~~Gv-TG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~-----------------~- 217 (267)
T 3vnd_A 161 ADTLKMVSE----QGEGYTYLLSRAGV-TGTESKAGEPIENILTQLAEFNAPPPLLGFGIA-----------------E- 217 (267)
T ss_dssp HHHHHHHHH----HCCSCEEESCCCCC-C--------CHHHHHHHHHTTTCCCEEECSSCC-----------------S-
T ss_pred HHHHHHHHH----hCCCcEEEEecCCC-CCCccCCcHHHHHHHHHHHHhcCCCEEEECCcC-----------------C-
Confidence 766665544 222223221 2221 12111 011 1355677777 789998732111 1
Q ss_pred cccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 219 RELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 219 ~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+..+..++..||||+|+=+.+
T Consensus 218 ----~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 218 ----PEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp ----HHHHHHHHHTTCSEEEECHHH
T ss_pred ----HHHHHHHHHcCCCEEEECHHH
Confidence 455655788999999998765
No 66
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.98 E-value=0.073 Score=47.03 Aligned_cols=109 Identities=10% Similarity=0.041 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecc
Q 022892 34 RMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQI 112 (290)
Q Consensus 34 e~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kI 112 (290)
+.++.+++ +|+|+|....-. |.+| +.++.+.+.+++.|+.++.++++.+.+..+.+ .+|++-+
T Consensus 92 ~~i~~~~~----aGad~I~l~~~~---~~~p---------~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 92 QDVDALAQ----AGADIIAFDASF---RSRP---------VDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHHHHHHH----HTCSEEEEECCS---SCCS---------SCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHH----cCCCEEEECccc---cCCh---------HHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEe
Confidence 34444444 599988654321 1111 34667777778889999999999999988877 6999954
Q ss_pred cCC--------ccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 113 PAF--------LCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 113 gs~--------~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
..+ .-.++++++++.+.+.||+-.-|.. |.+++..+.+ .|..-+++
T Consensus 156 ~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~-t~~d~~~~~~----~GadgV~V 209 (229)
T 3q58_A 156 TLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYN-TPALAANAIE----HGAWAVTV 209 (229)
T ss_dssp TTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCC-SHHHHHHHHH----TTCSEEEE
T ss_pred cCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHH----cCCCEEEE
Confidence 322 2357788998877789999999998 9999988654 47654444
No 67
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.98 E-value=0.048 Score=49.74 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccC----CHHHHHHHH-hc--CCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCR----QTDLLVAAA-KT--GKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~----n~~lL~~~a-~~--~~PVilstG~~~tl~ 144 (290)
.+.++.|.++++++|+.++.++++.+.++...+ .++++-|..++.. ++.....+. .. +.||+-.-|.. |++
T Consensus 155 ~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~-t~e 233 (272)
T 3tsm_A 155 DDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIF-THE 233 (272)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCC-SHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCC-CHH
Confidence 467999999999999999999999999988777 6999999988763 233333333 33 68999999999 999
Q ss_pred HHHHHHHHHHHcCCCcEEE
Q 022892 145 VMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L 163 (290)
++..+ ...|-+-+.+
T Consensus 234 dv~~l----~~~Ga~gvLV 248 (272)
T 3tsm_A 234 DCLRL----EKSGIGTFLI 248 (272)
T ss_dssp HHHHH----HTTTCCEEEE
T ss_pred HHHHH----HHcCCCEEEE
Confidence 98875 4456544433
No 68
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.95 E-value=0.078 Score=46.89 Aligned_cols=109 Identities=13% Similarity=0.047 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecc
Q 022892 34 RMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQI 112 (290)
Q Consensus 34 e~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kI 112 (290)
+.++.+++ +|+|+|....-. +.+| +.++.+.+.+++.|+.++.++++.+.+..+.+ .+|++-+
T Consensus 92 ~~i~~~~~----~Gad~V~l~~~~---~~~p---------~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 92 DDVDALAQ----AGAAIIAVDGTA---RQRP---------VAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHHH----HTCSEEEEECCS---SCCS---------SCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHH----cCCCEEEECccc---cCCH---------HHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEE
Confidence 34444444 598888654321 1111 34667777778889999999999999988877 6999854
Q ss_pred cCC--------ccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 113 PAF--------LCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 113 gs~--------~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
..+ .-.++++++++.+.+.||+-.-|.. |.+++..+.+ .|..-+++
T Consensus 156 ~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~-t~~d~~~~~~----~GadgV~V 209 (232)
T 3igs_A 156 TMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYN-SPALAAEAIR----YGAWAVTV 209 (232)
T ss_dssp TTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCC-SHHHHHHHHH----TTCSEEEE
T ss_pred cCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHH----cCCCEEEE
Confidence 322 2357788998877699999999998 9999888653 47654544
No 69
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.86 E-value=0.12 Score=47.19 Aligned_cols=182 Identities=9% Similarity=0.016 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-h
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-V 106 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~ 106 (290)
+.+..++++++|.+ +|++.|-..+|.. |...++ ++ +....++.+.+..++++..=.-+.+.++...+ .
T Consensus 28 ~~e~k~~i~~~L~~----~Gv~~IE~g~~~~-~~~~~~----~~--d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~aG 96 (302)
T 2ftp_A 28 EVADKIRLVDDLSA----AGLDYIEVGSFVS-PKWVPQ----MA--GSAEVFAGIRQRPGVTYAALAPNLKGFEAALESG 96 (302)
T ss_dssp CHHHHHHHHHHHHH----TTCSEEEEEECSC-TTTCGG----GT--THHHHHHHSCCCTTSEEEEECCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHH----cCcCEEEECCCcC-cccccc----cc--CHHHHHHHhhhcCCCEEEEEeCCHHHHHHHHhCC
Confidence 56666777776665 6999887766542 332222 11 12233344444467777654446666666655 5
Q ss_pred cceecc--cCCccC-----------C----HHHHHHHHhcCCeEEEeCCC--------CCCHHHHHHHHHHHHHcCCCcE
Q 022892 107 ADIIQI--PAFLCR-----------Q----TDLLVAAAKTGKIINIKKGQ--------FCASSVMVNSAEKVRLAGNPNV 161 (290)
Q Consensus 107 ~d~~kI--gs~~~~-----------n----~~lL~~~a~~~~PVilstG~--------~~tl~e~~~Ave~i~~~Gn~~i 161 (290)
++.+-| ++.+.. | .+.++.+-+.|+.|-..-++ -.+++++.+.++.+.+.|-+.|
T Consensus 97 ~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 176 (302)
T 2ftp_A 97 VKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEV 176 (302)
T ss_dssp CCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEE
T ss_pred cCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 776654 333321 2 23445556678888422111 1378999999998889999888
Q ss_pred EEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEE
Q 022892 162 MVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 239 (290)
Q Consensus 162 ~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~I 239 (290)
.|+.... +-.......-+..+++ . ++|+++ +.|-. +.+...-+.+|+.+||+ .|
T Consensus 177 ~l~DT~G---~~~P~~~~~lv~~l~~~~~~~~l~~-H~Hn~------------------~Gla~An~laAv~aGa~--~v 232 (302)
T 2ftp_A 177 SLGDTIG---VGTAGATRRLIEAVASEVPRERLAG-HFHDT------------------YGQALANIYASLLEGIA--VF 232 (302)
T ss_dssp EEEESSS---CCCHHHHHHHHHHHTTTSCGGGEEE-EEBCT------------------TSCHHHHHHHHHHTTCC--EE
T ss_pred EEeCCCC---CcCHHHHHHHHHHHHHhCCCCeEEE-EeCCC------------------ccHHHHHHHHHHHhCCC--EE
Confidence 8875443 2222233456677776 6 689999 76753 12235567789999998 78
Q ss_pred eeeCC
Q 022892 240 EVHDD 244 (290)
Q Consensus 240 EkH~t 244 (290)
+.-+.
T Consensus 233 d~tv~ 237 (302)
T 2ftp_A 233 DSSVA 237 (302)
T ss_dssp EEBGG
T ss_pred Eeccc
Confidence 87654
No 70
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.85 E-value=0.28 Score=45.21 Aligned_cols=201 Identities=13% Similarity=0.093 Sum_probs=115.1
Q ss_pred hhcCCCCeEEEEccCCc------------cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH
Q 022892 10 QLKAAEPFFLLAGPNVI------------ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK 77 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsi------------en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~ 77 (290)
.++.+.++.+|.|-.-+ .+.+..++.|+++++ .||+++=-.. . ......++.++
T Consensus 5 ~~~~~~~~~iIGEriNvTg~~sf~~~~~~~~~~~a~~~A~~~v~----~GAdiIDIg~-g---------~~~v~~~eem~ 70 (300)
T 3k13_A 5 EVKPEINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVE----DGALVIDVNM-D---------DGLLDARTEMT 70 (300)
T ss_dssp ----CTTCEEEEEEEETTTCHHHHHHHHTTCHHHHHHHHHHHHH----TTCSEEEEEC-C---------CTTSCHHHHHH
T ss_pred eeCCCCCcEEEEEeccCCCCHHHHHHHhcCCHHHHHHHHHHHHH----CCCCEEEECC-C---------CCCCCHHHHHH
Confidence 45677888888855333 135667777777776 5999875543 1 11111245566
Q ss_pred HHHHHHH----hcCCcEEEeecCcccHHHHhh---hccee-cccCCccC-CH-HHHHHHHhcCCeEEEeC----CCCCCH
Q 022892 78 ILEKVKI----AYDIPIVTDVHETVQCEEVGK---VADII-QIPAFLCR-QT-DLLVAAAKTGKIINIKK----GQFCAS 143 (290)
Q Consensus 78 ~L~~~~~----~~Gi~~~s~~~d~~~~~~l~~---~~d~~-kIgs~~~~-n~-~lL~~~a~~~~PVilst----G~~~tl 143 (290)
++..+.+ ..++|+.-+-++++.++...+ ..+++ -|...+-. ++ .++..+++.+.||++-. |+.-|+
T Consensus 71 rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~ 150 (300)
T 3k13_A 71 TFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTA 150 (300)
T ss_dssp HHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSH
T ss_pred HHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCH
Confidence 6555443 479999999999998888665 24433 22222111 12 57788899999999864 565577
Q ss_pred HHHHHH----HHHH-HHcCCC-cEEEEeecCC-CCCCCCC---CC---chhHHHHHh-c-CCCEEEeCCCCCCCCCCCcc
Q 022892 144 SVMVNS----AEKV-RLAGNP-NVMVCERGTM-FGYNDLI---VD---PRNLEWMRE-A-NCPVVADVTHSLQQPAGKKL 208 (290)
Q Consensus 144 ~e~~~A----ve~i-~~~Gn~-~i~L~~~gs~-~~y~~~~---~d---L~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~ 208 (290)
++-... ++.+ .+.|-+ +=+++..|.. ++....+ -| |+++..+++ + ++|+.+-.|
T Consensus 151 ~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~S----------- 219 (300)
T 3k13_A 151 ARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVS----------- 219 (300)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGG-----------
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEEC-----------
Confidence 664333 3333 566753 3467788874 4433221 13 355666674 6 888854111
Q ss_pred CCCCccCCCC------cccHHHH-HHHHHHcCCCEEEE
Q 022892 209 DGGGVASGGL------RELIPCI-ARTAIAVGVDGVFM 239 (290)
Q Consensus 209 ~~~~~~~~g~------~~~~~~~-a~aAva~GA~G~~I 239 (290)
+.|.|. |+.+..+ ...|+..|.+..++
T Consensus 220 ----nkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Iv 253 (300)
T 3k13_A 220 ----NLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIV 253 (300)
T ss_dssp ----GGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ----cccccCCCCcchhHHHHHHHHHHHHHcCCCEEec
Confidence 222232 4444443 33578899996554
No 71
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.83 E-value=0.38 Score=44.76 Aligned_cols=186 Identities=12% Similarity=0.096 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHh-cCCcEEEe-ec---CcccHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIA-YDIPIVTD-VH---ETVQCEE 102 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~-~Gi~~~s~-~~---d~~~~~~ 102 (290)
+.+..++++++|.+ +|++.|=..+-+--|-+++. + ++.....++.+++..+. .++++..= .. ..+.++.
T Consensus 28 ~~e~k~~i~~~L~~----~Gvd~IEvG~~~g~p~ssp~-~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~ 101 (345)
T 1nvm_A 28 TLDDVRAIARALDK----AKVDSIEVAHGDGLQGSSFN-Y-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKN 101 (345)
T ss_dssp CHHHHHHHHHHHHH----HTCSEEECSCTTSTTCCBTT-T-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEecCCCCCCCCCc-c-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHH
Confidence 67788899999987 49998876411000122222 1 22223455666666544 34554432 11 2344555
Q ss_pred Hhh-hcceecccCCcc---CC-HHHHHHHHhcCCeEEEeC--CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCC
Q 022892 103 VGK-VADIIQIPAFLC---RQ-TDLLVAAAKTGKIINIKK--GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDL 175 (290)
Q Consensus 103 l~~-~~d~~kIgs~~~---~n-~~lL~~~a~~~~PVilst--G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~ 175 (290)
..+ .+|.+-|.- .+ .+ .+.++++-+.|+.|.+.- ....+++.+...++.+...|-..|.|+.-... ..|.
T Consensus 102 a~~aGvd~v~I~~-~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~-~~P~- 178 (345)
T 1nvm_A 102 AYQAGARVVRVAT-HCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGA-MSMN- 178 (345)
T ss_dssp HHHHTCCEEEEEE-ETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCC-CCHH-
T ss_pred HHhCCcCEEEEEE-eccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCc-cCHH-
Confidence 544 588777752 22 12 355566667788776653 54448899999999998888876666554332 1222
Q ss_pred CCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 176 IVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 176 ~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
.+ ..-+..+++ + ++||++ +.|-. +.+...-+.+|+.+||+ .++.-..
T Consensus 179 ~v-~~lv~~l~~~~~~~~pi~~-H~Hn~------------------~G~avAn~laA~~aGa~--~vd~tv~ 228 (345)
T 1nvm_A 179 DI-RDRMRAFKAVLKPETQVGM-HAHHN------------------LSLGVANSIVAVEEGCD--RVDASLA 228 (345)
T ss_dssp HH-HHHHHHHHHHSCTTSEEEE-ECBCT------------------TSCHHHHHHHHHHTTCC--EEEEBGG
T ss_pred HH-HHHHHHHHHhcCCCceEEE-EECCC------------------ccHHHHHHHHHHHcCCC--EEEecch
Confidence 11 144666777 7 799999 77763 22335567789999998 7776653
No 72
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.81 E-value=0.13 Score=47.44 Aligned_cols=139 Identities=14% Similarity=0.064 Sum_probs=94.5
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..|++..++-+..++-++||.-++..+++ .++.+.+++..+.+ ...|.| .++.- |++|+...++.|..
T Consensus 12 ~~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~-------~~~G~p---D~~~v-t~~em~~~~~~I~r 80 (298)
T 3eoo_A 12 AKFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAA-------NSLGIP---DLGIS-TMDDVLVDANRITN 80 (298)
T ss_dssp HHHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHH-------HTTCCC---SSSCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHH-------HhcCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 45677777778888899999999999887 69999999866554 245766 56665 99999988887754
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
. .++||++|-+.+- |..+.+...++.-+..||.
T Consensus 81 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~aGaa 113 (298)
T 3eoo_A 81 A-------------------------------TNLPLLVDIDTGW----------------GGAFNIARTIRSFIKAGVG 113 (298)
T ss_dssp H-------------------------------CCSCEEEECTTCS----------------SSHHHHHHHHHHHHHTTCS
T ss_pred h-------------------------------cCCeEEEECCCCC----------------CCHHHHHHHHHHHHHhCCe
Confidence 2 1368999988762 3233333444555678999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 022892 236 GVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 275 (290)
Q Consensus 236 G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~l 275 (290)
|+-||-...|.| |-|...-..-..+++++.|+.+..+.
T Consensus 114 gv~iEDq~~~k~--cGh~~gk~l~~~~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 114 AVHLEDQVGQKR--CGHRPGKECVPAGEMVDRIKAAVDAR 151 (298)
T ss_dssp EEEEECBCCCCC--TTCCCCCCBCCHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCcc--cCCCCCCeecCHHHHHHHHHHHHHhc
Confidence 999998765544 32322222234456667777666654
No 73
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.64 E-value=0.3 Score=45.97 Aligned_cols=193 Identities=14% Similarity=0.082 Sum_probs=103.2
Q ss_pred CchhhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHH
Q 022892 2 DPSTALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEK 81 (290)
Q Consensus 2 ~~~~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~ 81 (290)
|-+|.|...++-+-| ++.|....+-+ .++|..+ |.+-|+.++-+ . +..++.++++++
T Consensus 33 dl~t~l~~~~~l~~P-ii~apM~~vt~----~~lA~av---A~~GGlgii~~-~--------------~s~e~~~~~I~~ 89 (361)
T 3khj_A 33 SLETKLTKNVSLKIP-LISSAMDTVTE----HLMAVGM---ARLGGIGIIHK-N--------------MDMESQVNEVLK 89 (361)
T ss_dssp CCCEESSSSCEESSS-EEECSSTTTCS----HHHHHHH---HHTTCEEEECS-S--------------SCHHHHHHHHHH
T ss_pred cCceecccccccCCC-EEeecCCCCCc----HHHHHHH---HHcCCCeEEec-C--------------CCHHHHHHHHHH
Confidence 334555545554554 56665554322 2444433 33345655532 1 113566777888
Q ss_pred HHHhcCCcEEEeecC--cccHHHHhh-hcceecccCCccCC---HHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 82 VKIAYDIPIVTDVHE--TVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 82 ~~~~~Gi~~~s~~~d--~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
+.+...+++..-+.- .+.++.+.+ .+|++-|.+..-.. .+.++++.+ .+.||++++- .|.++++.+.
T Consensus 90 vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v--~t~e~A~~l~---- 163 (361)
T 3khj_A 90 VKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV--VTEEATKELI---- 163 (361)
T ss_dssp HHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE--CSHHHHHHHH----
T ss_pred HHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC--CCHHHHHHHH----
Confidence 777667777766543 345555545 68988774333222 345565544 4899999654 3687766554
Q ss_pred HcCCCcEEEE-----eecCCCCCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 022892 155 LAGNPNVMVC-----ERGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 225 (290)
Q Consensus 155 ~~Gn~~i~L~-----~~gs~~~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~ 225 (290)
..|-+-|.+- .|++..-.....-++..+..+++ .++||+.|.- .+. ..-
T Consensus 164 ~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GG--------------------I~~--~~d 221 (361)
T 3khj_A 164 ENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGG--------------------IRY--SGD 221 (361)
T ss_dssp HTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESC--------------------CCS--HHH
T ss_pred HcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECC--------------------CCC--HHH
Confidence 4676555541 12211000000123455555532 5899987522 111 223
Q ss_pred HHHHHHcCCCEEEEeeeCCC
Q 022892 226 ARTAIAVGVDGVFMEVHDDP 245 (290)
Q Consensus 226 a~aAva~GA~G~~IEkH~t~ 245 (290)
+..|+++||+|+++=+-|.-
T Consensus 222 i~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 222 IGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp HHHHHHHTCSEEEESTTTTT
T ss_pred HHHHHHcCCCEEEEChhhhc
Confidence 44678899999998765543
No 74
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.63 E-value=0.089 Score=48.50 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=72.2
Q ss_pred HHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec----Cc-------c----cHHHHhh-
Q 022892 42 ISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH----ET-------V----QCEEVGK- 105 (290)
Q Consensus 42 ~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~----d~-------~----~~~~l~~- 105 (290)
.+.++|+++|+.-.|.- +- .......+.+..+.+.|+++|++++.+++ .. + .+..+.+
T Consensus 116 ~a~~~GAdaV~vlv~~~-~d-----~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l 189 (304)
T 1to3_A 116 AVKRDGAKALKLLVLWR-SD-----EDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS 189 (304)
T ss_dssp HHHHTTCCEEEEEEEEC-TT-----SCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCEEEEEEEcC-CC-----ccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc
Confidence 34447999998765541 00 00000125577788999999999999986 21 1 1333334
Q ss_pred hcceecccCC-cc-CCH-HHHHHHHh----cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 106 VADIIQIPAF-LC-RQT-DLLVAAAK----TGKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 106 ~~d~~kIgs~-~~-~n~-~lL~~~a~----~~~P-VilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
.+||+|++.. +- ... .+.+.+.. ++.| |+++=|. +.+++.+.+..+...|- ..+++=|..
T Consensus 190 GaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~--~~~~~~~~~~~a~~aGa-~Gv~vGRaI 257 (304)
T 1to3_A 190 GADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGV--DEKLFPRAVRVAMEAGA-SGFLAGRAV 257 (304)
T ss_dssp SCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTS--CTTTHHHHHHHHHHTTC-CEEEESHHH
T ss_pred CCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCC--CHHHHHHHHHHHHHcCC-eEEEEehHH
Confidence 5999999884 11 122 33333444 6999 8888887 57676666666666664 566655554
No 75
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=95.58 E-value=0.15 Score=46.08 Aligned_cols=82 Identities=12% Similarity=0.021 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccC----CHHHHHHHHh---cCCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCR----QTDLLVAAAK---TGKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~----n~~lL~~~a~---~~~PVilstG~~~tl~ 144 (290)
.+.++.|.++++++|+.++.|++|.+.++...+ ..+++-|-.|++. +...-..++. .+..++-..|.. |.+
T Consensus 139 ~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~-t~~ 217 (258)
T 4a29_A 139 ERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGIS-ERN 217 (258)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSC-CHH
T ss_pred HHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCC-CHH
Confidence 467999999999999999999999999998777 6999999888873 3222233332 256677778888 888
Q ss_pred HHHHHHHHHHHcCCC
Q 022892 145 VMVNSAEKVRLAGNP 159 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~ 159 (290)
++... ...|-+
T Consensus 218 dv~~l----~~~G~~ 228 (258)
T 4a29_A 218 EIEEL----RKLGVN 228 (258)
T ss_dssp HHHHH----HHTTCC
T ss_pred HHHHH----HHCCCC
Confidence 87753 445643
No 76
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=95.58 E-value=0.15 Score=46.31 Aligned_cols=182 Identities=14% Similarity=0.127 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-h
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-V 106 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~ 106 (290)
+.+..++++++|. ++|++.|-..+|.. ++-.|. +...++.++.+++..++++..=.-+.+.++.+.+ .
T Consensus 24 ~~e~k~~i~~~L~----~~Gv~~IE~g~~~~-~~~~p~------~~~~~e~~~~i~~~~~~~v~~l~~n~~~i~~a~~~G 92 (295)
T 1ydn_A 24 PTADKIALINRLS----DCGYARIEATSFVS-PKWVPQ------LADSREVMAGIRRADGVRYSVLVPNMKGYEAAAAAH 92 (295)
T ss_dssp CHHHHHHHHHHHT----TTTCSEEEEEECSC-TTTCGG------GTTHHHHHHHSCCCSSSEEEEECSSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHH----HcCcCEEEEccCcC-cccccc------ccCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHCC
Confidence 4455555555554 57999887765542 221110 1234445555544458887654456666666555 5
Q ss_pred cceeccc--CC--------cc---CCHHH----HHHHHhcCCeEE--EeCC------CCCCHHHHHHHHHHHHHcCCCcE
Q 022892 107 ADIIQIP--AF--------LC---RQTDL----LVAAAKTGKIIN--IKKG------QFCASSVMVNSAEKVRLAGNPNV 161 (290)
Q Consensus 107 ~d~~kIg--s~--------~~---~n~~l----L~~~a~~~~PVi--lstG------~~~tl~e~~~Ave~i~~~Gn~~i 161 (290)
++.+-|. +. .+ .|.+. ++.+-+.|.+|- |++- ...+++++...++.+.+.|-..+
T Consensus 93 ~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 93 ADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp CSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 7766554 22 11 13333 455567899987 5442 22389999999998889999888
Q ss_pred EEEeecCCCCCCCCCCCchhHHHHHh-cC-CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEE
Q 022892 162 MVCERGTMFGYNDLIVDPRNLEWMRE-AN-CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 239 (290)
Q Consensus 162 ~L~~~gs~~~y~~~~~dL~~i~~lk~-~~-~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~I 239 (290)
.|+.... +-.......-+..+++ .. +|+++ +.|-. .| +...-+.+|+.+||+ .|
T Consensus 173 ~l~Dt~G---~~~P~~~~~lv~~l~~~~~~~~l~~-H~Hn~---------------~G---la~an~l~Ai~aG~~--~v 228 (295)
T 1ydn_A 173 SLGDTIG---RGTPDTVAAMLDAVLAIAPAHSLAG-HYHDT---------------GG---RALDNIRVSLEKGLR--VF 228 (295)
T ss_dssp EEEETTS---CCCHHHHHHHHHHHHTTSCGGGEEE-EEBCT---------------TS---CHHHHHHHHHHHTCC--EE
T ss_pred EecCCCC---CcCHHHHHHHHHHHHHhCCCCeEEE-EECCC---------------cc---hHHHHHHHHHHhCCC--EE
Confidence 8886433 2222223456667776 55 78988 66642 12 224456788999998 78
Q ss_pred eeeCC
Q 022892 240 EVHDD 244 (290)
Q Consensus 240 EkH~t 244 (290)
+.-..
T Consensus 229 d~sv~ 233 (295)
T 1ydn_A 229 DASVG 233 (295)
T ss_dssp EEBTT
T ss_pred Eeccc
Confidence 87653
No 77
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=95.56 E-value=0.18 Score=46.35 Aligned_cols=181 Identities=10% Similarity=0.057 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-h
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-V 106 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~ 106 (290)
+.+..++++++|.+ +|++.|=..+|.. |+..|. +. +....++...+..+..+..=+-+...++...+ .
T Consensus 26 ~~e~k~~i~~~L~~----~Gv~~IE~g~~~~-~~~~p~----~~--d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~~g 94 (307)
T 1ydo_A 26 ATEDKITWINQLSR----TGLSYIEITSFVH-PKWIPA----LR--DAIDVAKGIDREKGVTYAALVPNQRGLENALEGG 94 (307)
T ss_dssp CHHHHHHHHHHHHT----TTCSEEEEEECSC-TTTCGG----GT--THHHHHHHSCCCTTCEEEEECCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCCcC-cccccc----cC--CHHHHHHHhhhcCCCeEEEEeCCHHhHHHHHhCC
Confidence 67888999999877 5999887766542 332221 11 11122222222345555443345555665555 5
Q ss_pred cceecccCC--cc---CC------------HHHHHHHHhcCCeEE--EeC-------CCCCCHHHHHHHHHHHHHcCCCc
Q 022892 107 ADIIQIPAF--LC---RQ------------TDLLVAAAKTGKIIN--IKK-------GQFCASSVMVNSAEKVRLAGNPN 160 (290)
Q Consensus 107 ~d~~kIgs~--~~---~n------------~~lL~~~a~~~~PVi--lst-------G~~~tl~e~~~Ave~i~~~Gn~~ 160 (290)
++.+-|-.. +. .| .+.++++-+.|+.|- ++. |.. +++.+.+.++.+.+.|-..
T Consensus 95 ~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~Ga~~ 173 (307)
T 1ydo_A 95 INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDV-PIEQVIRLSEALFEFGISE 173 (307)
T ss_dssp CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCC-CHHHHHHHHHHHHHHTCSC
T ss_pred cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCC-CHHHHHHHHHHHHhcCCCE
Confidence 666554321 21 11 244566667888874 333 223 8999999999999999988
Q ss_pred EEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEE
Q 022892 161 VMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 238 (290)
Q Consensus 161 i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~ 238 (290)
|.|+..... ..|.. + ..-+..+++ + ++|+++ +.|-. +.+...-+.+|+.+||+ .
T Consensus 174 i~l~DT~G~-~~P~~-v-~~lv~~l~~~~~~~~l~~-H~Hnd------------------~Gla~AN~laAv~aGa~--~ 229 (307)
T 1ydo_A 174 LSLGDTIGA-ANPAQ-V-ETVLEALLARFPANQIAL-HFHDT------------------RGTALANMVTALQMGIT--V 229 (307)
T ss_dssp EEEECSSCC-CCHHH-H-HHHHHHHHTTSCGGGEEE-ECBGG------------------GSCHHHHHHHHHHHTCC--E
T ss_pred EEEcCCCCC-cCHHH-H-HHHHHHHHHhCCCCeEEE-EECCC------------------CchHHHHHHHHHHhCCC--E
Confidence 888876542 12221 1 245566776 5 588999 77753 22335567789999998 7
Q ss_pred EeeeCC
Q 022892 239 MEVHDD 244 (290)
Q Consensus 239 IEkH~t 244 (290)
|+.=+.
T Consensus 230 vd~tv~ 235 (307)
T 1ydo_A 230 FDGSAG 235 (307)
T ss_dssp EEEBGG
T ss_pred EEEccc
Confidence 887554
No 78
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.55 E-value=0.24 Score=46.39 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecC-----cccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHE-----TVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVM 146 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d-----~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~ 146 (290)
....+.+...|+++|+++..-.+. .+.++.+.+ .+|++.+..... ..++++.+-+.++||+.+.. |+++.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~-~~~~i~~~~~~g~~v~~~v~---t~~~a 158 (369)
T 3bw2_A 83 EVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP-DREVIARLRRAGTLTLVTAT---TPEEA 158 (369)
T ss_dssp HHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC-CHHHHHHHHHTTCEEEEEES---SHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC-cHHHHHHHHHCCCeEEEECC---CHHHH
Confidence 355667888999999997542221 234555555 589888876543 45777888778999998753 78776
Q ss_pred HHHHHHHHHcCCCcEEEEee-------cCCCC-CCCCC--CC-chhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCcc
Q 022892 147 VNSAEKVRLAGNPNVMVCER-------GTMFG-YNDLI--VD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVA 214 (290)
Q Consensus 147 ~~Ave~i~~~Gn~~i~L~~~-------gs~~~-y~~~~--~d-L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~ 214 (290)
..+. ..|-+ .++++. |+..+ ..... .+ +..++.+++ .++||+.+..=.
T Consensus 159 ~~a~----~~GaD-~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~--------------- 218 (369)
T 3bw2_A 159 RAVE----AAGAD-AVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIM--------------- 218 (369)
T ss_dssp HHHH----HTTCS-EEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCC---------------
T ss_pred HHHH----HcCCC-EEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCC---------------
Confidence 6543 35654 444532 22100 00000 23 566777776 789998743221
Q ss_pred CCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 215 SGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 215 ~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
. +.-+..++++||+|+++=+-+.
T Consensus 219 --~-----~~~~~~~l~~GAd~V~vGs~~~ 241 (369)
T 3bw2_A 219 --R-----GGQIAAVLAAGADAAQLGTAFL 241 (369)
T ss_dssp --S-----HHHHHHHHHTTCSEEEESHHHH
T ss_pred --C-----HHHHHHHHHcCCCEEEEChHHh
Confidence 1 3445567889999999876553
No 79
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=95.54 E-value=0.17 Score=46.19 Aligned_cols=179 Identities=13% Similarity=0.090 Sum_probs=106.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEEeecCcccHHHHhh-
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVTDVHETVQCEEVGK- 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s~~~d~~~~~~l~~- 105 (290)
+.+..++++++|.+ +|++.|-..+|.. |+..|. ++ +. .++.+...+. |+.+..-..+...++.+.+
T Consensus 25 ~~e~k~~i~~~L~~----~Gv~~IE~g~~~~-~~~~p~----~~--d~-~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~a 92 (298)
T 2cw6_A 25 STPVKIKLIDMLSE----AGLSVIETTSFVS-PKWVPQ----MG--DH-TEVLKGIQKFPGINYPVLTPNLKGFEAAVAA 92 (298)
T ss_dssp CHHHHHHHHHHHHH----TTCSEECCEECCC-TTTCGG----GT--TH-HHHHHHSCCCTTCBCCEECCSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH----cCcCEEEECCCcC-cccccc----cC--CH-HHHHHHHhhCCCCEEEEEcCCHHhHHHHHHC
Confidence 56777888888876 5999987776652 322221 01 11 1222222222 6555544456666666655
Q ss_pred hcceecccCC--ccC-----------C----HHHHHHHHhcCCeEEEeC---------CCCCCHHHHHHHHHHHHHcCCC
Q 022892 106 VADIIQIPAF--LCR-----------Q----TDLLVAAAKTGKIINIKK---------GQFCASSVMVNSAEKVRLAGNP 159 (290)
Q Consensus 106 ~~d~~kIgs~--~~~-----------n----~~lL~~~a~~~~PVilst---------G~~~tl~e~~~Ave~i~~~Gn~ 159 (290)
.++.+.|-.. +.. + .+.++++-+.|++|-+.- |.. +++++.+.++.+.+.|-.
T Consensus 93 g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~Ga~ 171 (298)
T 2cw6_A 93 GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI-SPAKVAEVTKKFYSMGCY 171 (298)
T ss_dssp TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSC-CHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHHHcCCC
Confidence 5776665322 110 0 123455667888885322 233 899999999999999998
Q ss_pred cEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEE
Q 022892 160 NVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGV 237 (290)
Q Consensus 160 ~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~ 237 (290)
.|.|+..... ..|.. + ..-+..+++ + ++|+++ +.|-. .| +...-+.+|+.+||+
T Consensus 172 ~i~l~DT~G~-~~P~~-~-~~lv~~l~~~~~~~~i~~-H~Hn~---------------~G---la~An~laA~~aGa~-- 227 (298)
T 2cw6_A 172 EISLGDTIGV-GTPGI-M-KDMLSAVMQEVPLAALAV-HCHDT---------------YG---QALANTLMALQMGVS-- 227 (298)
T ss_dssp EEEEEETTSC-CCHHH-H-HHHHHHHHHHSCGGGEEE-EEBCT---------------TS---CHHHHHHHHHHTTCC--
T ss_pred EEEecCCCCC-cCHHH-H-HHHHHHHHHhCCCCeEEE-EECCC---------------Cc---hHHHHHHHHHHhCCC--
Confidence 8888876542 12221 1 245666676 5 588999 77753 12 224456789999998
Q ss_pred EEeeeC
Q 022892 238 FMEVHD 243 (290)
Q Consensus 238 ~IEkH~ 243 (290)
.++.-.
T Consensus 228 ~vd~tv 233 (298)
T 2cw6_A 228 VVDSSV 233 (298)
T ss_dssp EEEEBT
T ss_pred EEEeec
Confidence 777744
No 80
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.42 E-value=0.19 Score=44.21 Aligned_cols=130 Identities=12% Similarity=0.110 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC-CcEE-EeecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD-IPIV-TDVHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G-i~~~-s~~~d~~~~~~l~~ 105 (290)
+.+..++.++++.+ .|+++|-.. ++ . ..+++.++++++++. +.+- -++++.++++...+
T Consensus 27 ~~~~~~~~~~al~~----gGv~~iel~-~k-----------~---~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~ 87 (224)
T 1vhc_A 27 NADDILPLADTLAK----NGLSVAEIT-FR-----------S---EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS 87 (224)
T ss_dssp SGGGHHHHHHHHHH----TTCCEEEEE-TT-----------S---TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEe-cc-----------C---chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH
Confidence 44567788888877 589876543 11 1 234566777777773 3332 26888899998877
Q ss_pred -hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC-CchhHH
Q 022892 106 -VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLE 183 (290)
Q Consensus 106 -~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~-dL~~i~ 183 (290)
.+|++-.|. ++.+.++.+-+.+.|+++ |.. |++|+..|. ..|-+.+.+ || ...+ -+..+.
T Consensus 88 aGAd~v~~p~---~d~~v~~~ar~~g~~~i~--Gv~-t~~e~~~A~----~~Gad~vk~------Fp--a~~~gG~~~lk 149 (224)
T 1vhc_A 88 SGADFVVTPG---LNPKIVKLCQDLNFPITP--GVN-NPMAIEIAL----EMGISAVKF------FP--AEASGGVKMIK 149 (224)
T ss_dssp HTCSEEECSS---CCHHHHHHHHHTTCCEEC--EEC-SHHHHHHHH----HTTCCEEEE------TT--TTTTTHHHHHH
T ss_pred CCCCEEEECC---CCHHHHHHHHHhCCCEEe--ccC-CHHHHHHHH----HCCCCEEEE------ee--CccccCHHHHH
Confidence 699997774 567877888889999988 666 999998875 367766666 33 2222 356677
Q ss_pred HHHh-c-CCCEEE
Q 022892 184 WMRE-A-NCPVVA 194 (290)
Q Consensus 184 ~lk~-~-~~pV~~ 194 (290)
.++. + ++|++.
T Consensus 150 ~l~~~~~~ipvva 162 (224)
T 1vhc_A 150 ALLGPYAQLQIMP 162 (224)
T ss_dssp HHHTTTTTCEEEE
T ss_pred HHHhhCCCCeEEE
Confidence 7777 6 788854
No 81
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.40 E-value=0.071 Score=49.18 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=99.3
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcceecccCCcc
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VADIIQIPAFLC 117 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d~~kIgs~~~ 117 (290)
+.+++.|++++.+=. . .-|-...|+|......+++++++++...||++.- ..+...++.+.+ .+|++ -.+...
T Consensus 35 ~~ye~~GA~~lsvLe-~--~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I-d~s~~~ 110 (297)
T 4adt_A 35 KIAEKAGAIGVMILE-N--IPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML-DESEVL 110 (297)
T ss_dssp HHHHHHTCSEEEECC-C--CC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE-EEETTS
T ss_pred HHHHHcCCCEEEEec-C--CCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE-EcCCCC
Confidence 344557999987632 1 1111122444221346888999999999999964 333556666655 68888 333334
Q ss_pred CCHHHHHHHHh--cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CC----------------------
Q 022892 118 RQTDLLVAAAK--TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GY---------------------- 172 (290)
Q Consensus 118 ~n~~lL~~~a~--~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y---------------------- 172 (290)
+..++++++.+ .+.|+++. .. +.+|.+.+++ .|. +++-.+ |..+ +.
T Consensus 111 ~~~~li~~i~~~~~g~~vvv~--v~-~~~Ea~~a~~----~Ga-d~I~v~-g~~gTG~~~~~v~h~~~~~~eir~l~~~~ 181 (297)
T 4adt_A 111 TMADEYNHINKHKFKTPFVCG--CT-NLGEALRRIS----EGA-SMIRTK-GEAGTGNIIEAIKHIRTVNNEIKYLCSLD 181 (297)
T ss_dssp CCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHHHH----HTC-SEEEEC-CCTTSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHhcCCCCeEEEE--eC-CHHHHHHHHh----CCC-CEEEEC-CCcCCCchHHHHHHHHHhhhhhhhhcccc
Confidence 55567666666 67899884 45 8999888754 354 344444 2110 10
Q ss_pred --C------CCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 173 --N------DLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 173 --~------~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
. ....++..+..+++ .++||++=+.=++ .. +.-+..+.++||+|+++=+.+
T Consensus 182 ~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI---------------~t-----~~dv~~~~~~GAdgVlVGsai 241 (297)
T 4adt_A 182 ESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGI---------------AT-----PADAAMCMQLGMDGVFVGSGI 241 (297)
T ss_dssp TTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCC---------------CS-----HHHHHHHHHTTCSCEEESHHH
T ss_pred ccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCC---------------CC-----HHHHHHHHHcCCCEEEEhHHH
Confidence 0 01345666777776 6788862111111 01 334456678899999998776
Q ss_pred C
Q 022892 244 D 244 (290)
Q Consensus 244 t 244 (290)
.
T Consensus 242 ~ 242 (297)
T 4adt_A 242 F 242 (297)
T ss_dssp H
T ss_pred H
Confidence 3
No 82
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.32 E-value=0.78 Score=39.58 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hc
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VA 107 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~ 107 (290)
+..++.++++.+ .|+++|=.. + +. ....+.+++..+ ..+.+-. ++++.+.++...+ .+
T Consensus 25 ~~~~~~~~~l~~----gGv~~iel~-~-----------k~---~~~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GA 84 (207)
T 2yw3_A 25 EDLLGLARVLEE----EGVGALEIT-L-----------RT---EKGLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGA 84 (207)
T ss_dssp CCHHHHHHHHHH----TTCCEEEEE-C-----------SS---THHHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH----cCCCEEEEe-C-----------CC---hHHHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCC
Confidence 446777887776 588876432 1 11 123333443333 4444333 5777888888776 69
Q ss_pred ceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC-CchhHHHHH
Q 022892 108 DIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMR 186 (290)
Q Consensus 108 d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~-dL~~i~~lk 186 (290)
|++-.|. .+.++.+.+...+.|+++. .. |++|+..|.+ .|-+.+.+ |+ ...+ -+..+..++
T Consensus 85 d~v~~~~---~d~~v~~~~~~~g~~~i~G--~~-t~~e~~~A~~----~Gad~v~~------fp--a~~~gG~~~lk~l~ 146 (207)
T 2yw3_A 85 AFLVSPG---LLEEVAALAQARGVPYLPG--VL-TPTEVERALA----LGLSALKF------FP--AEPFQGVRVLRAYA 146 (207)
T ss_dssp SEEEESS---CCHHHHHHHHHHTCCEEEE--EC-SHHHHHHHHH----TTCCEEEE------TT--TTTTTHHHHHHHHH
T ss_pred CEEEcCC---CCHHHHHHHHHhCCCEEec--CC-CHHHHHHHHH----CCCCEEEE------ec--CccccCHHHHHHHH
Confidence 9987774 4578888888889999884 55 8999988754 57766655 33 2223 345677777
Q ss_pred h-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHH
Q 022892 187 E-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEEL 264 (290)
Q Consensus 187 ~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~l 264 (290)
. + ++||+. . +|.. ..-+....++||+|+.+=+-++. -++++.++.
T Consensus 147 ~~~~~ipvva--i------------------GGI~---~~n~~~~l~aGa~~vavgSai~~----------~d~~~i~~~ 193 (207)
T 2yw3_A 147 EVFPEVRFLP--T------------------GGIK---EEHLPHYAALPNLLAVGGSWLLQ----------GNLEAVRAK 193 (207)
T ss_dssp HHCTTCEEEE--B------------------SSCC---GGGHHHHHTCSSBSCEEESGGGS----------SCHHHHHHH
T ss_pred hhCCCCcEEE--e------------------CCCC---HHHHHHHHhCCCcEEEEehhhhC----------CCHHHHHHH
Confidence 7 6 789864 1 1211 11233457889998888665543 245555555
Q ss_pred HHHHHH
Q 022892 265 LEELVA 270 (290)
Q Consensus 265 v~~ir~ 270 (290)
.+.+.+
T Consensus 194 a~~~~~ 199 (207)
T 2yw3_A 194 VRAAKA 199 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 83
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.31 E-value=0.13 Score=50.50 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=85.6
Q ss_pred CCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEE
Q 022892 13 AAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIV 91 (290)
Q Consensus 13 ~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~ 91 (290)
.++++.+.|+.+.. ...++.|++|++ +|+++|...+-. +.. ...++.++++++++ +++++
T Consensus 216 ~~grL~v~aavG~~---~d~~~~a~~l~~----aG~d~I~id~a~-----------g~~-~~~~~~i~~ir~~~p~~~Vi 276 (496)
T 4fxs_A 216 EQGRLRVGAAVGAA---PGNEERVKALVE----AGVDVLLIDSSH-----------GHS-EGVLQRIRETRAAYPHLEII 276 (496)
T ss_dssp TTSCBCCEEECCSS---SCCHHHHHHHHH----TTCSEEEEECSC-----------TTS-HHHHHHHHHHHHHCTTCCEE
T ss_pred cccceeeeeeeccc---cchHHHHHHHHh----ccCceEEecccc-----------ccc-hHHHHHHHHHHHHCCCceEE
Confidence 34577888888763 235788888887 499998765321 111 45677788888888 88886
Q ss_pred E-eecCcccHHHHhh-hcceecccCC---c----------cCCHHHHHHHH----hcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 92 T-DVHETVQCEEVGK-VADIIQIPAF---L----------CRQTDLLVAAA----KTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 92 s-~~~d~~~~~~l~~-~~d~~kIgs~---~----------~~n~~lL~~~a----~~~~PVilstG~~~tl~e~~~Ave 151 (290)
. .+.+.+.+..+.+ .+|++++|.. . ..+..++.+++ +.+.|||-+-|.. +.+++..|+.
T Consensus 277 ~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~-~~~di~kala 354 (496)
T 4fxs_A 277 GGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIR-FSGDISKAIA 354 (496)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCC-SHHHHHHHHH
T ss_pred EcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCC-CHHHHHHHHH
Confidence 6 7899999988888 7999998611 1 22444455444 4589999999999 9999998854
No 84
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.19 E-value=0.21 Score=44.37 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=73.9
Q ss_pred HHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEee----------cCcccHHH----Hhh-hcc
Q 022892 44 TKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDV----------HETVQCEE----VGK-VAD 108 (290)
Q Consensus 44 ~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~----------~d~~~~~~----l~~-~~d 108 (290)
.+.|++.|..+.+.+.+ + +. .+.+.++.+.+.|+++|++++.+. +++..+.. +.+ .+|
T Consensus 109 ~~~Ga~~v~~~l~~~~~---~--~~--~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 109 IRMGADAVSIHVNVGSD---E--DW--EAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp HHTTCSEEEEEEEETST---T--HH--HHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHcCCCEEEEEEecCCC---C--HH--HHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 34699988554333211 0 10 012457778899999999999877 55544433 333 599
Q ss_pred eecccCCccCCHHHHHHHH-hcCCeEEEeCCCCC-CHHHHHHHHHHHHHcCCCcEEE
Q 022892 109 IIQIPAFLCRQTDLLVAAA-KTGKIINIKKGQFC-ASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a-~~~~PVilstG~~~-tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+++++- -.+.++++++. ..+.||+..-|... +.++....+..+...|-.-+.+
T Consensus 182 ~i~~~~--~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 182 IVKTSY--TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp EEEECC--CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred EEEECC--CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 999984 35788888876 57899999988874 3888777666666678754443
No 85
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.05 E-value=0.27 Score=43.24 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=87.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-eecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s-~~~d~~~~~~l~~ 105 (290)
+.+..++.++++++ .|+++|-.. ++ . ..+++.+++.++++ ++.+-. ++++.+.++...+
T Consensus 36 ~~~~~~~~~~al~~----gGv~~iel~-~k-----------~---~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~ 96 (225)
T 1mxs_A 36 REEDILPLADALAA----GGIRTLEVT-LR-----------S---QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEA 96 (225)
T ss_dssp CGGGHHHHHHHHHH----TTCCEEEEE-SS-----------S---THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCCEEEEe-cC-----------C---ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHH
Confidence 44567788888777 588876543 11 1 24556677777776 444332 6788888888877
Q ss_pred -hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC-CchhHH
Q 022892 106 -VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLE 183 (290)
Q Consensus 106 -~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~-dL~~i~ 183 (290)
..|++-.|. .+.+.++.....+.|++. |.. |++|+..|. ..|-+.+.+ || ...+ -+..+.
T Consensus 97 aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~----~~Gad~vk~------FP--a~~~~G~~~lk 158 (225)
T 1mxs_A 97 AGAQFVVTPG---ITEDILEAGVDSEIPLLP--GIS-TPSEIMMGY----ALGYRRFKL------FP--AEISGGVAAIK 158 (225)
T ss_dssp HTCSSEECSS---CCHHHHHHHHHCSSCEEC--EEC-SHHHHHHHH----TTTCCEEEE------TT--HHHHTHHHHHH
T ss_pred CCCCEEEeCC---CCHHHHHHHHHhCCCEEE--eeC-CHHHHHHHH----HCCCCEEEE------cc--CccccCHHHHH
Confidence 699998775 567888888889999987 665 999998875 467766666 33 2212 345566
Q ss_pred HHHh-c-CCCEEE
Q 022892 184 WMRE-A-NCPVVA 194 (290)
Q Consensus 184 ~lk~-~-~~pV~~ 194 (290)
.++. + ++|++.
T Consensus 159 ~i~~~~~~ipvva 171 (225)
T 1mxs_A 159 AFGGPFGDIRFCP 171 (225)
T ss_dssp HHHTTTTTCEEEE
T ss_pred HHHhhCCCCeEEE
Confidence 6666 5 788754
No 86
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.05 E-value=1.5 Score=37.75 Aligned_cols=159 Identities=13% Similarity=0.109 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEee---c---------Ccc
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDV---H---------ETV 98 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~---~---------d~~ 98 (290)
...++|+.+.+ .|++.+-.. +...++++++..++|++.-. | ..+
T Consensus 37 ~~~~~a~~~~~----~G~~~i~~~--------------------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~ 92 (234)
T 1yxy_A 37 IMPLMAKAAQE----AGAVGIRAN--------------------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMT 92 (234)
T ss_dssp SHHHHHHHHHH----HTCSEEEEE--------------------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHH
T ss_pred hHHHHHHHHHH----CCCcEeecC--------------------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHH
Confidence 34555555555 699877431 12345555666789986321 1 123
Q ss_pred cHHHHhh-hcceecccCCccCC------HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE-EEeecC
Q 022892 99 QCEEVGK-VADIIQIPAFLCRQ------TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM-VCERGT 168 (290)
Q Consensus 99 ~~~~l~~-~~d~~kIgs~~~~n------~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~-L~~~gs 168 (290)
.++.+.+ .+|++-++.....+ .++++.+.+. +++|+++.. |++|...+. ..|-+-+. .+.. .
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t~~ea~~a~----~~Gad~i~~~v~g-~ 164 (234)
T 1yxy_A 93 EVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS---TFDEGLVAH----QAGIDFVGTTLSG-Y 164 (234)
T ss_dssp HHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS---SHHHHHHHH----HTTCSEEECTTTT-S
T ss_pred HHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC---CHHHHHHHH----HcCCCEEeeeccc-c
Confidence 4555544 68888887765433 4677877766 889888653 788855543 35654331 1111 1
Q ss_pred CCCCC-CCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 169 MFGYN-DLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 169 ~~~y~-~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
..+.. ....++..+..+++.++||+.+..=. . +.-+....++||+|+++=+-+
T Consensus 165 ~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~-----------------s-----~~~~~~~~~~Gad~v~vGsal 218 (234)
T 1yxy_A 165 TPYSRQEAGPDVALIEALCKAGIAVIAEGKIH-----------------S-----PEEAKKINDLGVAGIVVGGAI 218 (234)
T ss_dssp STTSCCSSSCCHHHHHHHHHTTCCEEEESCCC-----------------S-----HHHHHHHHTTCCSEEEECHHH
T ss_pred CCCCcCCCCCCHHHHHHHHhCCCCEEEECCCC-----------------C-----HHHHHHHHHCCCCEEEEchHH
Confidence 11110 12346666666655479998743221 1 334556677899999987765
No 87
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.97 E-value=0.31 Score=41.88 Aligned_cols=193 Identities=13% Similarity=0.089 Sum_probs=106.2
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH 95 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~ 95 (290)
++|+|..+....+. .+.++++. +.|+++|-+. .| .....+-.+.++++|+++|++++..
T Consensus 2 ~ly~It~~~~~~~~---~~~~~~a~----~~Gv~~v~lr--~k----------~~~~~~~~~~i~~l~~~~~~~livn-- 60 (210)
T 3ceu_A 2 KLIVVTTPTFFVEE---DKIITALF----EEGLDILHLR--KP----------ETPAMYSERLLTLIPEKYHRRIVTH-- 60 (210)
T ss_dssp EEEEECCSSCCTTH---HHHHHHHH----HTTCCEEEEC--CS----------SCCHHHHHHHHHHSCGGGGGGEEES--
T ss_pred eEEEEeCcccccCH---HHHHHHHH----HCCCCEEEEc--cC----------CCCHHHHHHHHHHHHHHhCCeEEEe--
Confidence 36777766543232 34455444 4699887543 11 1111344556788888899998873
Q ss_pred CcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE---EeecCCCC
Q 022892 96 ETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV---CERGTMFG 171 (290)
Q Consensus 96 d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L---~~~gs~~~ 171 (290)
+.++...+ .++.+.+|..++.... ..++.+..+.. |++|+..|. .|-+.+.+ ....+..+
T Consensus 61 --d~~~~A~~~gadgvhl~~~~~~~~~------~~~~~ig~s~~---t~~e~~~A~-----~GaDyv~~g~vf~t~sk~~ 124 (210)
T 3ceu_A 61 --EHFYLKEEFNLMGIHLNARNPSEPH------DYAGHVSCSCH---SVEEVKNRK-----HFYDYVFMSPIYDSISKVN 124 (210)
T ss_dssp --SCTTHHHHTTCSEEECCSSSCSCCT------TCCSEEEEEEC---SHHHHHTTG-----GGSSEEEECCCC-------
T ss_pred --CCHHHHHHcCCCEEEECcccccccc------ccCCEEEEecC---CHHHHHHHh-----hCCCEEEECCcCCCCCCCC
Confidence 45566655 5999999988774221 12566666654 888877662 35544443 11112112
Q ss_pred CCCCCCCchhHHHHHh---cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCC
Q 022892 172 YNDLIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNA 248 (290)
Q Consensus 172 y~~~~~dL~~i~~lk~---~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka 248 (290)
+. ...++..+..+++ .++||+.= ||.. +.-...+++.||+|+-+=+-+.-.
T Consensus 125 ~~-~~~g~~~l~~~~~~~~~~iPviai--------------------GGI~---~~nv~~~~~~Ga~gVav~s~i~~~-- 178 (210)
T 3ceu_A 125 YY-STYTAEELREAQKAKIIDSKVMAL--------------------GGIN---EDNLLEIKDFGFGGAVVLGDLWNK-- 178 (210)
T ss_dssp ---CCCCHHHHHHHHHTTCSSTTEEEE--------------------SSCC---TTTHHHHHHTTCSEEEESHHHHTT--
T ss_pred CC-CCCCHHHHHHHHHhcCCCCCEEEE--------------------CCCC---HHHHHHHHHhCCCEEEEhHHhHcC--
Confidence 21 2356777777766 37898651 1211 111335567899999887666421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHh
Q 022892 249 PVDGPTQWPLRNLEELLEELVAIAKVS 275 (290)
Q Consensus 249 ~~D~~~sl~p~~l~~lv~~ir~~~~~l 275 (290)
.|.... .+|.+.++..+++.+..
T Consensus 179 -~d~~~~---~~~~~~v~~~~~~~~~~ 201 (210)
T 3ceu_A 179 -FDACLD---QNYLAVIEHFKKLKKLA 201 (210)
T ss_dssp -CCTTTS---SCCHHHHHHHHHHHHHH
T ss_pred -CCHHHH---HHHHHHHHHHHHHHHhh
Confidence 122111 45666666666665543
No 88
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.94 E-value=0.72 Score=45.76 Aligned_cols=157 Identities=13% Similarity=0.146 Sum_probs=94.2
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
....+-++|+|..+-.+.+....++..+++.+ .|+++|-.- +| .. + .. .+.+..+.++++|+++|++
T Consensus 5 ~~~~~~~lYlITd~~~~~~~~~l~~~ve~al~----~Gv~~vQlR--~K-~~-~---~~--~~~~~a~~l~~l~~~~~v~ 71 (540)
T 3nl6_A 5 KEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQ----NGVTLVQIR--EK-DA-D---TK--FFIEEALQIKELCHAHNVP 71 (540)
T ss_dssp GGGCCCSEEEEC-CTTCCTTCCHHHHHHHHHH----TTCSEEEEC--CS-SS-C---TT--HHHHHHHHHHHHHHHTTCC
T ss_pred CcCCCCCEEEEECchhccCcchHHHHHHHHHH----CCCCEEEEe--cC-CC-C---HH--HHHHHHHHHHHHHHhcCCE
Confidence 34456789999876432122234555555554 688776432 22 11 1 11 1235567789999999999
Q ss_pred EEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC---CCcEEEEe
Q 022892 90 IVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG---NPNVMVCE 165 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G---n~~i~L~~ 165 (290)
++.. | .++...+ .+|-+-+|..++.- ...|+.-..++-|.+|.. |++|+..|.+ .| -+.|.+
T Consensus 72 liIN--D--~~dlA~~~gAdGVHLgq~dl~~-~~ar~~lg~~~iiG~S~h---t~eea~~A~~----~G~~~aDYv~~-- 137 (540)
T 3nl6_A 72 LIIN--D--RIDVAMAIGADGIHVGQDDMPI-PMIRKLVGPDMVIGWSVG---FPEEVDELSK----MGPDMVDYIGV-- 137 (540)
T ss_dssp EEEC--S--CSHHHHHTTCSEEEECTTSSCH-HHHHHHHCTTSEEEEEEC---SHHHHHHHHH----TCC--CCEEEE--
T ss_pred EEEe--C--cHHHHHHcCCCEEEEChhhcCH-HHHHHHhCCCCEEEEECC---CHHHHHHHHH----cCCCCCCEEEE--
Confidence 9974 2 4555555 58889999998864 334555556888999986 8999888754 46 556555
Q ss_pred ecCCCCCCC------CCCCchhHHHHHh-c------CCCEEE
Q 022892 166 RGTMFGYND------LIVDPRNLEWMRE-A------NCPVVA 194 (290)
Q Consensus 166 ~gs~~~y~~------~~~dL~~i~~lk~-~------~~pV~~ 194 (290)
|.-|+.+. ..+.+..+..+++ . ++||+.
T Consensus 138 -Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvA 178 (540)
T 3nl6_A 138 -GTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVG 178 (540)
T ss_dssp -SCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred -cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEE
Confidence 22222111 1134556665554 2 688866
No 89
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.85 E-value=0.51 Score=43.56 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=89.6
Q ss_pred HHHHHHHHHhcCCcE-EEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 022892 76 LKILEKVKIAYDIPI-VTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 153 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~-~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i 153 (290)
-..|++..++-+.++ +-++||.-++..+++ .++.+.+++..+.+ +..|.| .++.- |++|+..-++.|
T Consensus 6 ~~~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~-------~~~G~p---D~~~v-t~~em~~~~~~I 74 (302)
T 3fa4_A 6 ATSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAA-------SVHGQA---DLGIC-TLNDMRANAEMI 74 (302)
T ss_dssp HHHHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHH-------HHHSCC---SSSCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHH-------HHcCCC---CCCcC-CHHHHHHHHHHH
Confidence 346777777777654 779999999999988 69999986543222 335777 56666 899998877766
Q ss_pred HHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 022892 154 RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 233 (290)
Q Consensus 154 ~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G 233 (290)
.+ ++ .++||++|-+.+- |..+.+....+.....|
T Consensus 75 ~~-----------~~-------------------~~~PviaD~d~Gy----------------g~~~~v~~tv~~l~~aG 108 (302)
T 3fa4_A 75 SN-----------IS-------------------PSTPVIADADTGY----------------GGPIMVARTTEQYSRSG 108 (302)
T ss_dssp HT-----------TS-------------------TTSCEEEECTTTT----------------SSHHHHHHHHHHHHHTT
T ss_pred Hh-----------hc-------------------cCCCEEEECCCCC----------------CCHHHHHHHHHHHHHcC
Confidence 42 10 1479999988763 32333334445556789
Q ss_pred CCEEEEeeeCCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 234 VDGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 234 A~G~~IEkH~t~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
|.|+-||-...|.|.- .+++.-.+.+++-+=++..+......+.
T Consensus 109 aagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~ 153 (302)
T 3fa4_A 109 VAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGS 153 (302)
T ss_dssp CCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 9999999876554431 1344445555554444444444333343
No 90
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.85 E-value=0.24 Score=47.48 Aligned_cols=109 Identities=19% Similarity=0.200 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hccee
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADII 110 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~ 110 (290)
.+.++.+++ +|+++|...+-. +.. ...++.++++++++|++++. .+.+.+.+..+.+ .+|++
T Consensus 146 ~e~~~~lve----aGvdvIvldta~-----------G~~-~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I 209 (400)
T 3ffs_A 146 IERAKLLVE----AGVDVIVLDSAH-----------GHS-LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGI 209 (400)
T ss_dssp CHHHHHHHH----HTCSEEEECCSC-----------CSB-HHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHH----cCCCEEEEeCCC-----------CCc-ccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEE
Confidence 677777777 499998754211 111 34466777787778999985 9999999999888 79999
Q ss_pred cccCC-------------ccCCHHHHHHHHh----cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 022892 111 QIPAF-------------LCRQTDLLVAAAK----TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 111 kIgs~-------------~~~n~~lL~~~a~----~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~ 162 (290)
++|.. ...+..++.+++. .+.|||-.=|.. +.+++..|+. .|..-++
T Consensus 210 ~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~-~~~di~kala----lGAd~V~ 273 (400)
T 3ffs_A 210 KVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIR-YSGDIGKALA----VGASSVM 273 (400)
T ss_dssp EECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC-SHHHHHHHHT----TTCSEEE
T ss_pred EEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCC-CHHHHHHHHH----cCCCEEE
Confidence 99521 1235566666643 589999999998 9999988754 4654333
No 91
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=94.81 E-value=0.61 Score=40.59 Aligned_cols=147 Identities=16% Similarity=0.076 Sum_probs=95.5
Q ss_pred HHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc
Q 022892 7 LFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY 86 (290)
Q Consensus 7 ~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~ 86 (290)
++..+. ..++..|.-. .+.+..++.++++.+ .|++++-.. ++ . ..+++.+++.++++
T Consensus 9 ~~~~l~-~~~~i~v~r~---~~~~~~~~~~~al~~----gGv~~iel~-~k-----------~---~~~~~~i~~l~~~~ 65 (214)
T 1wbh_A 9 AESILT-TGPVVPVIVV---KKLEHAVPMAKALVA----GGVRVLNVT-LR-----------T---ECAVDAIRAIAKEV 65 (214)
T ss_dssp HHHHHH-SCSEEEEECC---SSGGGHHHHHHHHHH----TTCCEEEEE-SC-----------S---TTHHHHHHHHHHHC
T ss_pred HHHHHH-HCCEEEEEEC---CCHHHHHHHHHHHHH----cCCCEEEEe-CC-----------C---hhHHHHHHHHHHHC
Confidence 445553 3444443322 244567888888877 589876543 11 1 23455667677777
Q ss_pred C-CcEE-EeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 87 D-IPIV-TDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 87 G-i~~~-s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+ +.+- -++.+.++++...+ .+|++-.|. ++.+..+.+...+.|++. |.. |++|+..|. ..|-+.+.+
T Consensus 66 ~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~----~~Gad~v~~ 135 (214)
T 1wbh_A 66 PEAIVGAGTVLNPQQLAEVTEAGAQFAISPG---LTEPLLKAATEGTIPLIP--GIS-TVSELMLGM----DYGLKEFKF 135 (214)
T ss_dssp TTSEEEEESCCSHHHHHHHHHHTCSCEEESS---CCHHHHHHHHHSSSCEEE--EES-SHHHHHHHH----HTTCCEEEE
T ss_pred cCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEE--ecC-CHHHHHHHH----HCCCCEEEE
Confidence 4 3222 25888889988877 699998774 567888888889999988 555 999998875 467766666
Q ss_pred EeecCCCCCCCCCC-CchhHHHHHh-c-CCCEEE
Q 022892 164 CERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVA 194 (290)
Q Consensus 164 ~~~gs~~~y~~~~~-dL~~i~~lk~-~-~~pV~~ 194 (290)
|| ...+ -+..+..++. + ++|++.
T Consensus 136 ------Fp--a~~~gG~~~lk~i~~~~~~ipvva 161 (214)
T 1wbh_A 136 ------FP--AEANGGVKALQAIAGPFSQVRFCP 161 (214)
T ss_dssp ------TT--TTTTTHHHHHHHHHTTCTTCEEEE
T ss_pred ------ec--CccccCHHHHHHHhhhCCCCeEEE
Confidence 33 2222 2556677777 6 788854
No 92
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.80 E-value=0.24 Score=48.40 Aligned_cols=118 Identities=13% Similarity=0.132 Sum_probs=85.3
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s 92 (290)
++++.+.|+.+. + ...++.|++|++ +|+++|...+-. +.. ...++.++++++++ +++++.
T Consensus 215 ~grl~v~aavG~--~-~~~~~~a~~l~~----aG~d~I~id~a~-----------g~~-~~~~~~v~~i~~~~p~~~Vi~ 275 (490)
T 4avf_A 215 QGRLRVGAAVGT--G-ADTGERVAALVA----AGVDVVVVDTAH-----------GHS-KGVIERVRWVKQTFPDVQVIG 275 (490)
T ss_dssp TSCBCCEEEECS--S-TTHHHHHHHHHH----TTCSEEEEECSC-----------CSB-HHHHHHHHHHHHHCTTSEEEE
T ss_pred cCcceeeeeecc--c-cchHHHHHHHhh----cccceEEecccC-----------Ccc-hhHHHHHHHHHHHCCCceEEE
Confidence 467788888776 2 245788888887 499988765211 111 35567788888888 888766
Q ss_pred -eecCcccHHHHhh-hcceecccCCc-------------cCCHHHHHHHHh----cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 93 -DVHETVQCEEVGK-VADIIQIPAFL-------------CRQTDLLVAAAK----TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 93 -~~~d~~~~~~l~~-~~d~~kIgs~~-------------~~n~~lL~~~a~----~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+.+.+.+..+.+ .+|+++||.+. ..+..++.++++ .+.|||-.-|.. +.+++..|+.
T Consensus 276 g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~-~~~di~kal~ 352 (490)
T 4avf_A 276 GNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIR-FSGDLAKAMV 352 (490)
T ss_dssp EEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC-SHHHHHHHHH
T ss_pred eeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCC-CHHHHHHHHH
Confidence 5899999998888 79999985211 234555555543 489999999999 9999998864
No 93
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=94.72 E-value=2.3 Score=41.20 Aligned_cols=120 Identities=10% Similarity=-0.039 Sum_probs=75.9
Q ss_pred cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCC-------------CCCCchhHHHHHh-c--CC
Q 022892 129 TGKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYND-------------LIVDPRNLEWMRE-A--NC 190 (290)
Q Consensus 129 ~~~P-VilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~-------------~~~dL~~i~~lk~-~--~~ 190 (290)
..+| |++|-....+.+++.+.++.+.+.|-+-|++.-++... .... ....+..+..+++ . ++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 3679 99999887788899999999988886555554433210 0000 0012456777777 5 79
Q ss_pred CEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022892 191 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 191 pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
||+....=. . ..-+..++++||++++|=+-+-- -.|.-++++.+.+++
T Consensus 375 PVIg~GGI~-----------------s-----~~DA~e~l~aGAd~Vqigrall~----------~gP~l~~~i~~~l~~ 422 (443)
T 1tv5_A 375 PIIASGGIF-----------------S-----GLDALEKIEAGASVCQLYSCLVF----------NGMKSAVQIKRELNH 422 (443)
T ss_dssp CEEEESSCC-----------------S-----HHHHHHHHHTTEEEEEESHHHHH----------HGGGHHHHHHHHHHH
T ss_pred cEEEECCCC-----------------C-----HHHHHHHHHcCCCEEEEcHHHHh----------cChHHHHHHHHHHHH
Confidence 998743221 1 34566778899998887665310 145677778777776
Q ss_pred HHHHhCCccc
Q 022892 271 IAKVSKGKQR 280 (290)
Q Consensus 271 ~~~~lg~~~~ 280 (290)
.-...|-+++
T Consensus 423 ~l~~~G~~si 432 (443)
T 1tv5_A 423 LLYQRGYYNL 432 (443)
T ss_dssp HHHHHTCSSS
T ss_pred HHHHhCCCCH
Confidence 6556665444
No 94
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=94.66 E-value=0.29 Score=45.93 Aligned_cols=229 Identities=10% Similarity=-0.024 Sum_probs=125.6
Q ss_pred hhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC---Cc------c------cCCCCChhH
Q 022892 10 QLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT---SS------K------SFRGPGMVE 74 (290)
Q Consensus 10 ~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt---s~------~------~~~g~~~~~ 74 (290)
.+...+|+.+=||+-. + ..++.+.+-+ +|+.+|.-.+....||. .| . .|...|++.
T Consensus 44 Gl~~~NPv~lAaG~~~--~---~~e~~~~~~~----~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~ 114 (345)
T 3oix_A 44 SFDFDNCLMNAAGVYC--M---TREELAAIDH----SEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINY 114 (345)
T ss_dssp TEEESCSEEECTTSSC--S---SHHHHHHHHT----SSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHH
T ss_pred CEECCCCCEEcCCCCC--C---CHHHHHHHHH----cCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHH
Confidence 5666788766667653 1 1244444443 57655444444423321 11 1 233344455
Q ss_pred HHHHHHHHH-HhcCCcEEEeecCcccHHHH--hhh------cceecc--c------CC-ccCCHHHH----HHHH-hcCC
Q 022892 75 GLKILEKVK-IAYDIPIVTDVHETVQCEEV--GKV------ADIIQI--P------AF-LCRQTDLL----VAAA-KTGK 131 (290)
Q Consensus 75 ~l~~L~~~~-~~~Gi~~~s~~~d~~~~~~l--~~~------~d~~kI--g------s~-~~~n~~lL----~~~a-~~~~ 131 (290)
.++.+++.. +..+.|++..++-...-+|+ .+. .|++-| + .+ ..++.+++ +++- ..++
T Consensus 115 ~~~~l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~ 194 (345)
T 3oix_A 115 YLDYVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTK 194 (345)
T ss_dssp HHHHHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCC
Confidence 666676654 35789999998754322222 111 123322 2 12 22555544 4442 3578
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec------------C-------CC-CC---CCCCCCchhHHHHHh-
Q 022892 132 IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG------------T-------MF-GY---NDLIVDPRNLEWMRE- 187 (290)
Q Consensus 132 PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g------------s-------~~-~y---~~~~~dL~~i~~lk~- 187 (290)
||.+|-....++.++..+++.. |...+.++.+. . .+ +| +...+.++.+..+++
T Consensus 195 PV~vKi~p~~~~~~~a~~~~~a---ga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~ 271 (345)
T 3oix_A 195 PLGIKLPPYFDIVHFDQAAAIF---NXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR 271 (345)
T ss_dssp CEEEEECCCCCHHHHHHHHHHH---TTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT
T ss_pred CeEEEECCCCCHHHHHHHHHHh---CCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH
Confidence 9999999887888888877755 33334333222 1 00 01 111223567778877
Q ss_pred c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHH
Q 022892 188 A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 265 (290)
Q Consensus 188 ~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv 265 (290)
. ++||+.+..=. . ..-+...+.+||++++|=+-+-. -.|.-++++.
T Consensus 272 ~~~~ipIIg~GGI~--------------------s--~~da~~~l~aGAd~V~igra~~~----------~gP~~~~~i~ 319 (345)
T 3oix_A 272 LNPSIQIIGTGGVX--------------------T--GRDAFEHILCGASMVQIGTALHQ----------EGPQIFKRIT 319 (345)
T ss_dssp SCTTSEEEEESSCC--------------------S--HHHHHHHHHHTCSEEEESHHHHH----------HCTHHHHHHH
T ss_pred cCCCCcEEEECCCC--------------------C--hHHHHHHHHhCCCEEEEChHHHh----------cChHHHHHHH
Confidence 5 68998742211 1 33455667889999988766311 1466788888
Q ss_pred HHHHHHHHHhCCccccc
Q 022892 266 EELVAIAKVSKGKQRMN 282 (290)
Q Consensus 266 ~~ir~~~~~lg~~~~~~ 282 (290)
+.+++.-...|-+++-+
T Consensus 320 ~~L~~~l~~~G~~si~e 336 (345)
T 3oix_A 320 KELXAIMTEKGYETLED 336 (345)
T ss_dssp HHHHHHHHHHTCCSGGG
T ss_pred HHHHHHHHHcCCCCHHH
Confidence 88877766666655433
No 95
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.60 E-value=2 Score=39.68 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=66.2
Q ss_pred HHHHHHHh-cCCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCC-CCCCchhHHHHHh-cCC
Q 022892 121 DLLVAAAK-TGKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYND-LIVDPRNLEWMRE-ANC 190 (290)
Q Consensus 121 ~lL~~~a~-~~~PVilstG~------~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~-~~~dL~~i~~lk~-~~~ 190 (290)
++++++-+ .+.||.++-.. ..+.++....++.+...|-.-|++..++... .++. ...++..+..+|+ +++
T Consensus 199 eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~i 278 (338)
T 1z41_A 199 EIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADM 278 (338)
T ss_dssp HHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCC
Confidence 34444432 38999999544 2378899999999988887767765543211 1111 2246677788888 899
Q ss_pred CEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 191 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 191 pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
||+....-. . +..+..+++.| ||++++=+-+
T Consensus 279 PVi~~Ggi~-----------------s-----~~~a~~~l~~G~aD~V~iGR~~ 310 (338)
T 1z41_A 279 ATGAVGMIT-----------------D-----GSMAEEILQNGRADLIFIGREL 310 (338)
T ss_dssp EEEECSSCC-----------------S-----HHHHHHHHHTTSCSEEEECHHH
T ss_pred CEEEECCCC-----------------C-----HHHHHHHHHcCCceEEeecHHH
Confidence 998732211 1 45677788888 9998887765
No 96
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.56 E-value=0.97 Score=39.30 Aligned_cols=213 Identities=11% Similarity=0.006 Sum_probs=115.5
Q ss_pred EEEEccCCcc-CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCC-ccc--------CCCCChhHHHHHHHHHHHhcC
Q 022892 18 FLLAGPNVIE-SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTS-SKS--------FRGPGMVEGLKILEKVKIAYD 87 (290)
Q Consensus 18 ~iIAgpcsie-n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts-~~~--------~~g~~~~~~l~~L~~~~~~~G 87 (290)
.+|+-..+.+ +.+...+.|+++.+ . +|.+-.+....+|--. +.. -.|..+..+++.++++++..+
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~----~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDE----Y-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGG----G-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHH----c-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 4455443322 33567777777755 4 7776655211112110 000 012233456788888888888
Q ss_pred CcEEEeec-Cc-------ccHHHHhh-hcceecccCCccCCHH-HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 88 IPIVTDVH-ET-------VQCEEVGK-VADIIQIPAFLCRQTD-LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 88 i~~~s~~~-d~-------~~~~~l~~-~~d~~kIgs~~~~n~~-lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
+|+..-.. ++ +.++.+.+ .+|.+-++.....+.. +++.+.+.+..+++--... |..|...++. ...
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-t~~e~~~~~~---~~~ 156 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPN-TPDERLKVID---DMT 156 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTT-CCHHHHHHHH---HHC
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCC-CHHHHHHHHH---hcC
Confidence 88776553 54 55666555 6999999977666654 4455566788777755555 6666555443 222
Q ss_pred CCcEEEEeecCCCCCCC-----CCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 022892 158 NPNVMVCERGTMFGYND-----LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 231 (290)
Q Consensus 158 n~~i~L~~~gs~~~y~~-----~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva 231 (290)
..-+.++-. +++.. ...++..+..+++ .++||..+.-=+ . ..-+.....
T Consensus 157 d~~i~~~~~---~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~----------------~------~e~i~~~~~ 211 (248)
T 1geq_A 157 TGFVYLVSL---YGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVS----------------K------REHVVSLLK 211 (248)
T ss_dssp SSEEEEECC---C-------CCCHHHHHHHHHHHHHCSSCEEEESCCC----------------S------HHHHHHHHH
T ss_pred CCeEEEEEC---CccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecC----------------C------HHHHHHHHH
Confidence 112323222 11111 0123556777777 789998742111 1 233444567
Q ss_pred cCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022892 232 VGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 271 (290)
Q Consensus 232 ~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~ 271 (290)
+||+|+++=+-+.-. ..+ +++..+++++.+++.
T Consensus 212 ~Gad~vivGsai~~~--~~~-----~~~~~~~~~~~~~~~ 244 (248)
T 1geq_A 212 EGANGVVVGSALVKI--IGE-----KGREATEFLKKKVEE 244 (248)
T ss_dssp TTCSEEEECHHHHHH--HHH-----HGGGCHHHHHHHHHH
T ss_pred cCCCEEEEcHHHHhh--Hhh-----ChHHHHHHHHHHHHH
Confidence 899999988765311 000 115677777776554
No 97
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=94.52 E-value=0.53 Score=43.13 Aligned_cols=137 Identities=11% Similarity=0.022 Sum_probs=88.1
Q ss_pred HHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
-..|++..++-+..++-++||.-++..+++ .++.+.+++..+.+. .+|.| .++.- |++|+...++.|.
T Consensus 10 ~~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~-------~lG~p---D~~~v-t~~em~~~~~~I~ 78 (287)
T 3b8i_A 10 RAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQ-------VLAAP---DFALI-TLSEFVEQATRIG 78 (287)
T ss_dssp HHHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHH-------HHSCC---SSSCS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHH-------hcCCC---CCCCC-CHHHHHHHHHHHH
Confidence 345777777777888889999999999988 699999998755543 23555 34555 9999998887765
Q ss_pred HcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCC
Q 022892 155 LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGV 234 (290)
Q Consensus 155 ~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA 234 (290)
+. ..+||++|-+.+- |..+.+...++..+..||
T Consensus 79 r~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~v~~l~~aGa 111 (287)
T 3b8i_A 79 RV-------------------------------ARLPVIADADHGY----------------GNALNVMRTVVELERAGI 111 (287)
T ss_dssp TT-------------------------------CSSCEEEECTTCS----------------SSHHHHHHHHHHHHHHTC
T ss_pred hc-------------------------------CCCCEEEECCCCC----------------CCHHHHHHHHHHHHHhCC
Confidence 32 1368888877653 223333334444556899
Q ss_pred CEEEEeeeCCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 235 DGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 235 ~G~~IEkH~t~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
.|+-||--..|.|.- .+++ -.+.+++ ++.|+.+..+
T Consensus 112 ~gv~iED~~~pKrcgh~~gk-l~~~~e~---~~~I~aa~~a 148 (287)
T 3b8i_A 112 AALTIEDTLLPAQFGRKSTD-LICVEEG---VGKIRAALEA 148 (287)
T ss_dssp SEEEEECBCCSCCTTTCTTC-BCCHHHH---HHHHHHHHHH
T ss_pred eEEEEcCCCCccccCCCCCC-ccCHHHH---HHHHHHHHHc
Confidence 999999765554432 1333 4444444 4444444443
No 98
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.48 E-value=0.57 Score=44.28 Aligned_cols=143 Identities=15% Similarity=0.036 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHhcCCcEEEe----ecCcccHHHHhh-hcceecccCCccCC---HHHHHHHHhc--CCeEEEeCCCCCC
Q 022892 73 VEGLKILEKVKIAYDIPIVTD----VHETVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKT--GKIINIKKGQFCA 142 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~----~~d~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~--~~PVilstG~~~t 142 (290)
++..++++++.+...+.+... +...+.++.+.+ .+|++.|-+..-.. .+.++++.+. +.||+..+. .|
T Consensus 82 e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v--~t 159 (366)
T 4fo4_A 82 EQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV--AT 159 (366)
T ss_dssp HHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEE--CS
T ss_pred HHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeee--CC
Confidence 455555666554322333322 233455666655 69998873322222 3445666554 789988554 36
Q ss_pred HHHHHHHHHHHHHcCCCcEEE-----EeecCCC--CCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCC
Q 022892 143 SSVMVNSAEKVRLAGNPNVMV-----CERGTMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGG 211 (290)
Q Consensus 143 l~e~~~Ave~i~~~Gn~~i~L-----~~~gs~~--~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~ 211 (290)
.++.+.+.+ .|-+-|.+ -+|++.. +.. .-++..+..+.+ .++||+.|.-=.
T Consensus 160 ~e~A~~a~~----aGAD~I~vG~gpGs~~~tr~~~g~g--~p~~~~l~~v~~~~~~~~iPVIA~GGI~------------ 221 (366)
T 4fo4_A 160 AEGARALIE----AGVSAVKVGIGPGSICTTRIVTGVG--VPQITAIADAAGVANEYGIPVIADGGIR------------ 221 (366)
T ss_dssp HHHHHHHHH----HTCSEEEECSSCSTTBCHHHHHCCC--CCHHHHHHHHHHHHGGGTCCEEEESCCC------------
T ss_pred HHHHHHHHH----cCCCEEEEecCCCCCCCcccccCcc--cchHHHHHHHHHHHhhcCCeEEEeCCCC------------
Confidence 888777654 57654444 0232210 011 123445555542 589998752211
Q ss_pred CccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCC
Q 022892 212 GVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 245 (290)
Q Consensus 212 ~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~ 245 (290)
. ..-...|.++||+|+++=+-|.-
T Consensus 222 --------~--~~di~kala~GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 222 --------F--SGDISKAIAAGASCVMVGSMFAG 245 (366)
T ss_dssp --------S--HHHHHHHHHTTCSEEEESTTTTT
T ss_pred --------C--HHHHHHHHHcCCCEEEEChHhhc
Confidence 1 22244678999999999876653
No 99
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.48 E-value=0.89 Score=40.00 Aligned_cols=129 Identities=19% Similarity=0.188 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE--EEeecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI--VTDVHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~--~s~~~d~~~~~~l~~ 105 (290)
+.+....+|+.|++ .|+.++-.. |. | ..+++.++++++++.-.+ +-|+.+.++++.+.+
T Consensus 23 ~~~~a~~~a~al~~----gGi~~iEvt-~~----t----------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~ 83 (217)
T 3lab_A 23 DLVHAIPMAKALVA----GGVHLLEVT-LR----T----------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAID 83 (217)
T ss_dssp CGGGHHHHHHHHHH----TTCCEEEEE-TT----S----------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEe-CC----C----------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHH
Confidence 55778888888888 589877552 22 1 245666666666664333 349999999999887
Q ss_pred -hcceecccCCccCCHHHHHHHHhcCC------eEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC-
Q 022892 106 -VADIIQIPAFLCRQTDLLVAAAKTGK------IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV- 177 (290)
Q Consensus 106 -~~d~~kIgs~~~~n~~lL~~~a~~~~------PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~- 177 (290)
..+++-.+. .|.++++++-+.+. |++= |.+ |++|+..|.+ .|-+-+-+ +|...+
T Consensus 84 AGA~fivsP~---~~~evi~~~~~~~v~~~~~~~~~P--G~~-TptE~~~A~~----~Gad~vK~--------FPa~~~g 145 (217)
T 3lab_A 84 AGAQFIVSPG---LTPELIEKAKQVKLDGQWQGVFLP--GVA-TASEVMIAAQ----AGITQLKC--------FPASAIG 145 (217)
T ss_dssp HTCSEEEESS---CCHHHHHHHHHHHHHCSCCCEEEE--EEC-SHHHHHHHHH----TTCCEEEE--------TTTTTTT
T ss_pred cCCCEEEeCC---CcHHHHHHHHHcCCCccCCCeEeC--CCC-CHHHHHHHHH----cCCCEEEE--------Ccccccc
Confidence 799998776 58899998888888 8776 777 9999999854 56654422 333323
Q ss_pred CchhHHHHHh-c-CCCEE
Q 022892 178 DPRNLEWMRE-A-NCPVV 193 (290)
Q Consensus 178 dL~~i~~lk~-~-~~pV~ 193 (290)
.+..+..++. + ++|++
T Consensus 146 G~~~lkal~~p~p~i~~~ 163 (217)
T 3lab_A 146 GAKLLKAWSGPFPDIQFC 163 (217)
T ss_dssp HHHHHHHHHTTCTTCEEE
T ss_pred CHHHHHHHHhhhcCceEE
Confidence 3566777776 5 56665
No 100
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.48 E-value=0.94 Score=42.62 Aligned_cols=179 Identities=16% Similarity=0.027 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhc----ceecc---------------------------------cCC-
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVA----DIIQI---------------------------------PAF- 115 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~----d~~kI---------------------------------gs~- 115 (290)
+|=..+.+.|.+.|++++.+-+...+++.+.+.. -|+|+ |-|
T Consensus 86 ~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~ 165 (352)
T 3sgz_A 86 DGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRR 165 (352)
T ss_dssp THHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCH
T ss_pred cHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcch
Confidence 5556788999999999999988888888877632 26653 110
Q ss_pred -cc-----------------------------------CCHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 116 -LC-----------------------------------RQTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 116 -~~-----------------------------------~n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
++ -+.+.++.+- .+++||++|-- . +.++.+.++ ..|-
T Consensus 166 ~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v-~-~~e~A~~a~----~~Ga 239 (352)
T 3sgz_A 166 RDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGI-L-TKEDAELAM----KHNV 239 (352)
T ss_dssp HHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEE-C-SHHHHHHHH----HTTC
T ss_pred hhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEec-C-cHHHHHHHH----HcCC
Confidence 00 0113455553 46889999854 2 677765544 4676
Q ss_pred CcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 159 PNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 159 ~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
+-|++-..|... .......+..++.+++ . .+||+.|..=. .| .. +..|+++||+
T Consensus 240 D~I~vsn~GG~~-~d~~~~~~~~L~~i~~av~~~ipVia~GGI~----------------~g-----~D-v~kaLalGA~ 296 (352)
T 3sgz_A 240 QGIVVSNHGGRQ-LDEVSASIDALREVVAAVKGKIEVYMDGGVR----------------TG-----TD-VLKALALGAR 296 (352)
T ss_dssp SEEEECCGGGTS-SCSSCCHHHHHHHHHHHHTTSSEEEEESSCC----------------SH-----HH-HHHHHHTTCS
T ss_pred CEEEEeCCCCCc-cCCCccHHHHHHHHHHHhCCCCeEEEECCCC----------------CH-----HH-HHHHHHcCCC
Confidence 655554444421 1112235567777765 4 68998864322 12 33 4457889999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCcccccc
Q 022892 236 GVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNI 283 (290)
Q Consensus 236 G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~~~~~~ 283 (290)
+++|=+-+-..-+ ..+. .--.+-++.+.++++..-..+|.+++-++
T Consensus 297 aV~iGr~~l~~l~-~~G~-~gv~~~l~~l~~el~~~m~~~G~~~i~el 342 (352)
T 3sgz_A 297 CIFLGRPILWGLA-CKGE-DGVKEVLDILTAELHRCMTLSGCQSVAEI 342 (352)
T ss_dssp EEEESHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHTCSBGGGC
T ss_pred EEEECHHHHHHHH-hcCc-HHHHHHHHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999875411000 0000 00002466677777777777787655443
No 101
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.48 E-value=0.4 Score=45.30 Aligned_cols=131 Identities=17% Similarity=0.181 Sum_probs=84.7
Q ss_pred HhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-
Q 022892 8 FNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY- 86 (290)
Q Consensus 8 ~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~- 86 (290)
++.+....++.+-++.+. +. ...+.++.+++ +|+++|...+.. +.. ...++.++++++++
T Consensus 88 i~~vk~~~~l~vga~vg~--~~-~~~~~~~~lie----aGvd~I~idta~-----------G~~-~~~~~~I~~ik~~~p 148 (366)
T 4fo4_A 88 VHQVKISGGLRVGAAVGA--AP-GNEERVKALVE----AGVDVLLIDSSH-----------GHS-EGVLQRIRETRAAYP 148 (366)
T ss_dssp HHHHHTTTSCCCEEECCS--CT-TCHHHHHHHHH----TTCSEEEEECSC-----------TTS-HHHHHHHHHHHHHCT
T ss_pred HHHHHhcCceeEEEEecc--Ch-hHHHHHHHHHh----CCCCEEEEeCCC-----------CCC-HHHHHHHHHHHHhcC
Confidence 344444455556555543 21 24556666666 599887654211 111 35566778887777
Q ss_pred CCcEEE-eecCcccHHHHhh-hcceeccc---CCc----------cCCHHHHHHHH----hcCCeEEEeCCCCCCHHHHH
Q 022892 87 DIPIVT-DVHETVQCEEVGK-VADIIQIP---AFL----------CRQTDLLVAAA----KTGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 87 Gi~~~s-~~~d~~~~~~l~~-~~d~~kIg---s~~----------~~n~~lL~~~a----~~~~PVilstG~~~tl~e~~ 147 (290)
+++++. .+.+++.+..+.+ .+|++++| ... ..+..+|.+++ ..+.||+-.=|.. +..++.
T Consensus 149 ~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~-~~~di~ 227 (366)
T 4fo4_A 149 HLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIR-FSGDIS 227 (366)
T ss_dssp TCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCC-SHHHHH
T ss_pred CCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCC-CHHHHH
Confidence 888765 7999999998887 79999994 111 23445555554 4689999999988 999988
Q ss_pred HHHHHHHHcCCCcEE
Q 022892 148 NSAEKVRLAGNPNVM 162 (290)
Q Consensus 148 ~Ave~i~~~Gn~~i~ 162 (290)
.|+. .|..-++
T Consensus 228 kala----~GAd~V~ 238 (366)
T 4fo4_A 228 KAIA----AGASCVM 238 (366)
T ss_dssp HHHH----TTCSEEE
T ss_pred HHHH----cCCCEEE
Confidence 7754 4654333
No 102
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.45 E-value=0.36 Score=45.42 Aligned_cols=102 Identities=19% Similarity=0.181 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hccee
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADII 110 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~ 110 (290)
.+.++.+++ +|+++|-..+- .+.. ...++.++++++.++++++. .+.+++.+..+.+ .+|++
T Consensus 107 ~e~a~~l~e----aGad~I~ld~a-----------~G~~-~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I 170 (361)
T 3khj_A 107 IERAKLLVE----AGVDVIVLDSA-----------HGHS-LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGI 170 (361)
T ss_dssp HHHHHHHHH----TTCSEEEECCS-----------CCSB-HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHH----cCcCeEEEeCC-----------CCCc-HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEE
Confidence 556666655 69998764311 1111 34566788888888999996 9999999998888 69999
Q ss_pred cccCC--c-----------cCCHHHHHHHH----hcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 111 QIPAF--L-----------CRQTDLLVAAA----KTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 111 kIgs~--~-----------~~n~~lL~~~a----~~~~PVilstG~~~tl~e~~~Ave 151 (290)
++|.. . ..+...+.+++ ..+.||+-.=|.. +.+++..|+.
T Consensus 171 ~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~-~~~di~kala 227 (361)
T 3khj_A 171 KVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIR-YSGDIGKALA 227 (361)
T ss_dssp EECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCC-SHHHHHHHHH
T ss_pred EEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCC-CHHHHHHHHH
Confidence 99521 1 23445555553 3589999999998 9999888754
No 103
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.44 E-value=1.7 Score=40.42 Aligned_cols=141 Identities=12% Similarity=0.015 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHH----HH-hcCCeEEEeC--CCC--CCHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVA----AA-KTGKIINIKK--GQF--CASS 144 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~----~a-~~~~PVilst--G~~--~tl~ 144 (290)
+.+....+.+.+.|.+.+-=-+....-....+ .-|+..+.+..++.+ +. ..+.||.+|. |.. .+.+
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d-----~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~ 144 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEG-----GYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYR 144 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHT-----TCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCC-----CcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHH
Confidence 45566666666667665532222111111111 125666677766543 32 2589999975 332 1456
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCC-CCCC------CCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccC
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERGTMF-GYND------LIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVAS 215 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~------~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~ 215 (290)
+....++.+...|-.-|++ |.++.. +|.. ...++..+..+++ + ++||+.+.+-.
T Consensus 145 ~~~~~a~~l~~aG~d~I~V-~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~---------------- 207 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVV-HARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIR---------------- 207 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCC----------------
T ss_pred HHHHHHHHHHHcCCCEEEE-ecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcC----------------
Confidence 7777788888888765554 554321 1211 1246778888888 7 89998854322
Q ss_pred CCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 216 GGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 216 ~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
. ..-+..+++ ||||++|=+-+
T Consensus 208 -s-----~eda~~~l~-GaD~V~iGRa~ 228 (350)
T 3b0p_A 208 -S-----LEEALFHLK-RVDGVMLGRAV 228 (350)
T ss_dssp -S-----HHHHHHHHT-TSSEEEECHHH
T ss_pred -C-----HHHHHHHHh-CCCEEEECHHH
Confidence 1 344555666 99999998755
No 104
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.44 E-value=0.31 Score=47.61 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=80.9
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT- 92 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s- 92 (290)
.++.+.+.++. +.+ ..+.|+++++ +|+++|-...-. |.. ...++.++++++.. +++++.
T Consensus 242 ~rl~vga~vG~--~~~-~~~~a~~~~~----aG~d~v~i~~~~-----------G~~-~~~~~~i~~i~~~~~~~pvi~~ 302 (514)
T 1jcn_A 242 KQLLCGAAVGT--RED-DKYRLDLLTQ----AGVDVIVLDSSQ-----------GNS-VYQIAMVHYIKQKYPHLQVIGG 302 (514)
T ss_dssp SCBCCEEEECS--STT-HHHHHHHHHH----TTCSEEEECCSC-----------CCS-HHHHHHHHHHHHHCTTCEEEEE
T ss_pred CceeeeeEecC--chh-hHHHHHHHHH----cCCCEEEeeccC-----------Ccc-hhHHHHHHHHHHhCCCCceEec
Confidence 45566666664 222 4677777666 699998763211 111 23456677777777 899997
Q ss_pred eecCcccHHHHhh-hcceecccC--C--------------ccCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 93 DVHETVQCEEVGK-VADIIQIPA--F--------------LCRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 93 ~~~d~~~~~~l~~-~~d~~kIgs--~--------------~~~n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave 151 (290)
++.+.+.+..+.+ .+|++.+|. + ...+..++.++.+ .+.||+.+-|.. +..++..|+.
T Consensus 303 ~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~-~~~di~kala 378 (514)
T 1jcn_A 303 NVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQ-TVGHVVKALA 378 (514)
T ss_dssp EECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCC-SHHHHHHHHH
T ss_pred ccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCC-CHHHHHHHHH
Confidence 8999999998887 699998843 1 1234466666654 589999999999 9999988764
No 105
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=94.43 E-value=0.37 Score=44.27 Aligned_cols=105 Identities=11% Similarity=-0.014 Sum_probs=67.6
Q ss_pred HHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC-------cccHH----HHhh-hcceec
Q 022892 44 TKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE-------TVQCE----EVGK-VADIIQ 111 (290)
Q Consensus 44 ~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d-------~~~~~----~l~~-~~d~~k 111 (290)
.+.|+++|....|.. +.. +. ...+.+..+.+.|+++|++++.+... ++.+. ...+ .+|++|
T Consensus 135 v~~GAdaV~~~i~~G----s~~-~~--~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VK 207 (295)
T 3glc_A 135 VRLNSCAVAAQVYIG----SEY-EH--QSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHTTCSEEEEEECTT----STT-HH--HHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHCCCCEEEEEEECC----CCc-HH--HHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEE
Confidence 346888887765542 000 00 01345667888999999999996542 22222 2223 589999
Q ss_pred ccCCccCCHHHHHHH-HhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC
Q 022892 112 IPAFLCRQTDLLVAA-AKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP 159 (290)
Q Consensus 112 Igs~~~~n~~lL~~~-a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~ 159 (290)
.+.-. +.++++ +..+.||+++=|...+.++.++.+......|-.
T Consensus 208 t~~t~----e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 208 TYYVE----KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGAS 252 (295)
T ss_dssp EECCT----TTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCS
T ss_pred eCCCH----HHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCe
Confidence 98431 223444 467899999999876778888888666667764
No 106
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.43 E-value=0.14 Score=46.99 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=66.5
Q ss_pred cCCccCCHHHHH----HHH-hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCCCCCCchhHHHHH
Q 022892 113 PAFLCRQTDLLV----AAA-KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYNDLIVDPRNLEWMR 186 (290)
Q Consensus 113 gs~~~~n~~lL~----~~a-~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y~~~~~dL~~i~~lk 186 (290)
|+..+.+..++. ++. ..+.||.+|.....+.++....++.+...|-.-|++ |.++.. .|.. ..++..+..++
T Consensus 104 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v-~g~~~~~~~~~-~~~~~~i~~i~ 181 (318)
T 1vhn_A 104 GGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFI-HTRTVVQSFTG-RAEWKALSVLE 181 (318)
T ss_dssp GGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEE-ESSCTTTTTSS-CCCGGGGGGSC
T ss_pred ccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEE-cCCCccccCCC-CcCHHHHHHHH
Confidence 455555665543 332 357999999744323333335666777788765555 655432 2321 24555666666
Q ss_pred hcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH-cCCCEEEEeeeCCCCCC
Q 022892 187 EANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA-VGVDGVFMEVHDDPLNA 248 (290)
Q Consensus 187 ~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva-~GA~G~~IEkH~t~dka 248 (290)
+ ++||+.+.+-.. ..-+..+++ .||||++|=+-+--+..
T Consensus 182 ~-~ipVi~~GgI~s----------------------~~da~~~l~~~gad~V~iGR~~l~~P~ 221 (318)
T 1vhn_A 182 K-RIPTFVSGDIFT----------------------PEDAKRALEESGCDGLLVARGAIGRPW 221 (318)
T ss_dssp C-SSCEEEESSCCS----------------------HHHHHHHHHHHCCSEEEESGGGTTCTT
T ss_pred c-CCeEEEECCcCC----------------------HHHHHHHHHcCCCCEEEECHHHHhCcc
Confidence 6 899998644221 344556666 79999999987654443
No 107
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=94.39 E-value=0.73 Score=42.78 Aligned_cols=176 Identities=14% Similarity=0.068 Sum_probs=106.7
Q ss_pred CHHHHHHHHH-HHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHH------h-cCCcEEEeecCccc
Q 022892 28 SEEHIMRMAK-HIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKI------A-YDIPIVTDVHETVQ 99 (290)
Q Consensus 28 n~~~~le~Ak-~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~------~-~Gi~~~s~~~d~~~ 99 (290)
+.+..+++|+ +|.+ +|++.|=..++- +++ ..+++++++++ . .+..+.+-.-....
T Consensus 39 ~~~~k~~i~~~~L~~----~Gv~~IE~g~~~----~~~---------~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~~ 101 (337)
T 3ble_A 39 STSEKLNIAKFLLQK----LNVDRVEIASAR----VSK---------GELETVQKIMEWAATEQLTERIEILGFVDGNKT 101 (337)
T ss_dssp CHHHHHHHHHHHHHT----TCCSEEEEEETT----SCT---------THHHHHHHHHHHHHHTTCGGGEEEEEESSTTHH
T ss_pred CHHHHHHHHHHHHHH----cCCCEEEEeCCC----CCh---------hHHHHHHHHHhhhhhhccCCCCeEEEEccchhh
Confidence 5677888888 8876 699887654432 122 23444444443 1 23444444444445
Q ss_pred HHHHhh-hcceecccCC--ccC-----------CH----HHHHHHHhcCCeEEEeCCC-----CCCHHHHHHHHHHHHHc
Q 022892 100 CEEVGK-VADIIQIPAF--LCR-----------QT----DLLVAAAKTGKIINIKKGQ-----FCASSVMVNSAEKVRLA 156 (290)
Q Consensus 100 ~~~l~~-~~d~~kIgs~--~~~-----------n~----~lL~~~a~~~~PVilstG~-----~~tl~e~~~Ave~i~~~ 156 (290)
++.+.+ .++++-|-.. +.. +. +.++++-+.|+.|.+.--. -.+++.+.+.++.+...
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE 181 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc
Confidence 666555 5776655432 111 11 3344555678888876433 22688888888888899
Q ss_pred CCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCC
Q 022892 157 GNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGV 234 (290)
Q Consensus 157 Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA 234 (290)
|...|.|+.-... ..|.. + ..-+..+++ + ++|+++ +.|-. +.+...-+.+|+.+||
T Consensus 182 Ga~~i~l~DT~G~-~~P~~-v-~~lv~~l~~~~p~~~i~~-H~Hnd------------------~GlA~AN~laAv~aGa 239 (337)
T 3ble_A 182 HIERIFLPDTLGV-LSPEE-T-FQGVDSLIQKYPDIHFEF-HGHND------------------YDLSVANSLQAIRAGV 239 (337)
T ss_dssp CCSEEEEECTTCC-CCHHH-H-HHHHHHHHHHCTTSCEEE-ECBCT------------------TSCHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCC-cCHHH-H-HHHHHHHHHhcCCCeEEE-EecCC------------------cchHHHHHHHHHHhCC
Confidence 9888888776542 12221 1 144666777 6 789999 77763 2233556778999999
Q ss_pred CEEEEeeeCC
Q 022892 235 DGVFMEVHDD 244 (290)
Q Consensus 235 ~G~~IEkH~t 244 (290)
+ .|+.-+.
T Consensus 240 ~--~vd~tv~ 247 (337)
T 3ble_A 240 K--GLHASIN 247 (337)
T ss_dssp S--EEEEBGG
T ss_pred C--EEEEecc
Confidence 8 7886554
No 108
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=94.38 E-value=0.3 Score=46.21 Aligned_cols=163 Identities=17% Similarity=0.181 Sum_probs=104.3
Q ss_pred hcCCCCeEEEEccCCc-cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 11 LKAAEPFFLLAGPNVI-ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 11 i~~~~~~~iIAgpcsi-en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
||-+.|.-|-...+.- .|.+...+..++|.+ +|+++|....-. .+.-+.+.+.+++..+|
T Consensus 26 IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~----aG~diVRvavp~---------------~~~a~al~~I~~~~~vP 86 (366)
T 3noy_A 26 IGGDAPIVVQSMTSTKTHDVEATLNQIKRLYE----AGCEIVRVAVPH---------------KEDVEALEEIVKKSPMP 86 (366)
T ss_dssp ESTTSCCEEEEECCSCTTCHHHHHHHHHHHHH----TTCCEEEEECCS---------------HHHHHHHHHHHHHCSSC
T ss_pred EcCCCcEEEEEecCCCCcCHHHHHHHHHHHHH----cCCCEEEeCCCC---------------hHHHHHHHHHHhcCCCC
Confidence 5566666665554431 245666777777766 699999875322 35567788888889999
Q ss_pred EEEee-cCcccHHHHhh-hcceecccCCccCCH----HHHHHHHhcCCeEEEeC-------------CCCCCHHHHHHH-
Q 022892 90 IVTDV-HETVQCEEVGK-VADIIQIPAFLCRQT----DLLVAAAKTGKIINIKK-------------GQFCASSVMVNS- 149 (290)
Q Consensus 90 ~~s~~-~d~~~~~~l~~-~~d~~kIgs~~~~n~----~lL~~~a~~~~PVilst-------------G~~~tl~e~~~A- 149 (290)
++.++ ||+..+....+ .+|.+-|-.+++-.. .+++.+...++||-+=. |.. +++.+.++
T Consensus 87 lvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~-~~eamVeSA 165 (366)
T 3noy_A 87 VIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYP-SAEALAESA 165 (366)
T ss_dssp EEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSC-CHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCC-CHHHHHHHH
Confidence 99998 99988877777 599999988888543 46677778899987731 112 55554444
Q ss_pred ---HHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCC
Q 022892 150 ---AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTH 198 (290)
Q Consensus 150 ---ve~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sH 198 (290)
++++.+.|-.++++-.-.|. .. .-+.+-..|.+ .++|+-+-.+-
T Consensus 166 l~~~~~~e~~gf~~iviS~K~S~--v~---~~i~ayr~la~~~dyPLHlGvTE 213 (366)
T 3noy_A 166 LRWSEKFEKWGFTNYKVSIKGSD--VL---QNVRANLIFAERTDVPLHIGITE 213 (366)
T ss_dssp HHHHHHHHHTTCCCEEEEEECSS--HH---HHHHHHHHHHHHCCCCEEECCSS
T ss_pred HHHHHHHHhCCCCeEEEeeecCC--hH---HHHHHHHHHHhccCCCEEEccCC
Confidence 34667778778776544432 10 01223233444 67887553333
No 109
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.31 E-value=2.2 Score=36.38 Aligned_cols=112 Identities=14% Similarity=0.015 Sum_probs=66.6
Q ss_pred ccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec--C-CC-CC
Q 022892 98 VQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--T-MF-GY 172 (290)
Q Consensus 98 ~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g--s-~~-~y 172 (290)
+.++.+.+ .+|.+.++..+.. ...++.... ++.+.++.. |++|+..+. ..|-+. +++... + ++ ++
T Consensus 79 ~~~~~a~~~gad~v~l~~~~~~-~~~~~~~~~-~~~ig~sv~---t~~~~~~a~----~~gaD~-i~~~~~f~~~~~~g~ 148 (221)
T 1yad_A 79 GRVDIALFSTIHRVQLPSGSFS-PKQIRARFP-HLHIGRSVH---SLEEAVQAE----KEDADY-VLFGHVFETDCKKGL 148 (221)
T ss_dssp SCHHHHHTTTCCEEEECTTSCC-HHHHHHHCT-TCEEEEEEC---SHHHHHHHH----HTTCSE-EEEECCC--------
T ss_pred ChHHHHHHcCCCEEEeCCCccC-HHHHHHHCC-CCEEEEEcC---CHHHHHHHH----hCCCCE-EEECCccccCCCCCC
Confidence 46677766 6999999987643 344455433 777887653 788876654 356544 444332 1 11 11
Q ss_pred CCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 173 NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 173 ~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
+ ..++..+..+++ .++||+.+.-=+ +.-...+.+.||+|+.+=+-+.
T Consensus 149 ~--~~~~~~l~~~~~~~~~pvia~GGI~-----------------------~~nv~~~~~~Ga~gv~vgs~i~ 196 (221)
T 1yad_A 149 E--GRGVSLLSDIKQRISIPVIAIGGMT-----------------------PDRLRDVKQAGADGIAVMSGIF 196 (221)
T ss_dssp ----CHHHHHHHHHHHCCSCEEEESSCC-----------------------GGGHHHHHHTTCSEEEESHHHH
T ss_pred C--CCCHHHHHHHHHhCCCCEEEECCCC-----------------------HHHHHHHHHcCCCEEEEhHHhh
Confidence 1 245667777776 789998742221 1223455678999999877663
No 110
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.26 E-value=1.1 Score=41.51 Aligned_cols=146 Identities=14% Similarity=0.091 Sum_probs=90.2
Q ss_pred HHHHHHHHHHhcCC-cEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 75 GLKILEKVKIAYDI-PIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi-~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
.-..|++..++-|- .++-++||.-++..+++ .++.+.+++..+. .+..|.| .++.- |++|+..-++.
T Consensus 12 ~a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a-------~s~~G~p---D~~~v-t~~em~~~~~~ 80 (307)
T 3lye_A 12 GAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTT-------ASRLGQP---DLAIA-QLHDMRDNADM 80 (307)
T ss_dssp HHHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHH-------HHHHCCC---SSSCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHH-------HHhcCCC---CCCCC-CHHHHHHHHHh
Confidence 45567787777664 45779999999999988 6999999654332 2345777 56666 89999877776
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 022892 153 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 232 (290)
Q Consensus 153 i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~ 232 (290)
|.+ ++ .+++||++|-+.+- |..+.+....+..+..
T Consensus 81 i~r-----------~~------------------~~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~a 115 (307)
T 3lye_A 81 IAN-----------LD------------------PFGPPLIADMDTGY----------------GGPIMVARTVEHYIRS 115 (307)
T ss_dssp HHT-----------SS------------------TTSCCEEEECTTCS----------------SSHHHHHHHHHHHHHT
T ss_pred hhc-----------cC------------------CCCCcEEEECCCCC----------------CCHHHHHHHHHHHHHc
Confidence 642 11 03479999988763 3233333445555678
Q ss_pred CCCEEEEeeeCCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhC
Q 022892 233 GVDGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVSK 276 (290)
Q Consensus 233 GA~G~~IEkH~t~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg 276 (290)
||.|+-||-...|.|.- .+++.-.+.+++-+-++..+......|
T Consensus 116 Gaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~ 160 (307)
T 3lye_A 116 GVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR 160 (307)
T ss_dssp TCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC
Confidence 99999999876554321 133444555555444444444443334
No 111
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.21 E-value=0.86 Score=38.76 Aligned_cols=175 Identities=10% Similarity=0.053 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEee--cCcc-cHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDV--HETV-QCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~--~d~~-~~~~l~ 104 (290)
|.....+.++.+. +.|++.+-+..++. + |... +..+++.++++++..++++.... .|+. .++.+.
T Consensus 14 D~~~~~~~~~~~~----~~G~~~i~~~~~dg-~------~~~~-~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~ 81 (220)
T 2fli_A 14 DYANFASELARIE----ETDAEYVHIDIMDG-Q------FVPN-ISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFA 81 (220)
T ss_dssp CGGGHHHHHHHHH----HTTCCEEEEEEEBS-S------SSSC-BCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHH
T ss_pred CHHHHHHHHHHHH----HcCCCEEEEEeecC-C------CCCc-cccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHH
Confidence 3333344444444 46998864443331 1 1000 12345555555555576666644 4443 467666
Q ss_pred h-hcceecccCCccCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCC---c
Q 022892 105 K-VADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVD---P 179 (290)
Q Consensus 105 ~-~~d~~kIgs~~~~n~-~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~d---L 179 (290)
+ .+|++.+........ ..++.+.+.+++++++.... |..|...+. . .+ -+.+++-.. ..+++....+ +
T Consensus 82 ~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~-t~~e~~~~~---~-~~-~d~vl~~~~-~~g~~g~~~~~~~~ 154 (220)
T 2fli_A 82 QAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPG-TPATALEPL---L-DL-VDQVLIMTV-NPGFGGQAFIPECL 154 (220)
T ss_dssp HHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTT-SCGGGGGGG---T-TT-CSEEEEESS-CTTCSSCCCCGGGH
T ss_pred HcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCC-CCHHHHHHH---H-hh-CCEEEEEEE-CCCCcccccCHHHH
Confidence 6 699999977766544 35566666788899988665 555544332 1 23 344444322 1223322222 2
Q ss_pred hhHHHHHh-c-----CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 180 RNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 180 ~~i~~lk~-~-----~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
..+..+++ . ++||+++. |.+. .-+..+..+||+|+++=+-++
T Consensus 155 ~~i~~~~~~~~~~~~~~~i~v~G--------------------GI~~---~~~~~~~~~Gad~vvvGsai~ 202 (220)
T 2fli_A 155 EKVATVAKWRDEKGLSFDIEVDG--------------------GVDN---KTIRACYEAGANVFVAGSYLF 202 (220)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEES--------------------SCCT---TTHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEC--------------------cCCH---HHHHHHHHcCCCEEEEChHHh
Confidence 33455555 3 67887642 2111 112235667999999987763
No 112
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.10 E-value=0.57 Score=39.69 Aligned_cols=168 Identities=13% Similarity=0.069 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHh-cCCcEEEeecC--c-cc-HHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIA-YDIPIVTDVHE--T-VQ-CEE 102 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~-~Gi~~~s~~~d--~-~~-~~~ 102 (290)
|.+..++.++++. .|+|+++-.. . .+ +..|++.++++.+. .++++.....- + +. ++.
T Consensus 11 ~~~~~~~~~~~~~-----~~~diie~G~-p-------~~-----~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~ 72 (211)
T 3f4w_A 11 TLPEAMVFMDKVV-----DDVDIIEVGT-P-------FL-----IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQL 72 (211)
T ss_dssp CHHHHHHHHHHHG-----GGCSEEEECH-H-------HH-----HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHH
T ss_pred CHHHHHHHHHHhh-----cCccEEEeCc-H-------HH-----HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHH
Confidence 5677777777763 2899887653 1 10 13456666666666 48888765422 2 22 455
Q ss_pred Hhh-hcceecccCCcc-CC-HHHHHHHHhcCCeEEEe-CCCCCCH-HHHHHHHHHHHHcCCCcEEEEeecCC-CCCCCCC
Q 022892 103 VGK-VADIIQIPAFLC-RQ-TDLLVAAAKTGKIINIK-KGQFCAS-SVMVNSAEKVRLAGNPNVMVCERGTM-FGYNDLI 176 (290)
Q Consensus 103 l~~-~~d~~kIgs~~~-~n-~~lL~~~a~~~~PVils-tG~~~tl-~e~~~Ave~i~~~Gn~~i~L~~~gs~-~~y~~~~ 176 (290)
+.+ .+|++-++.... .+ ..+++.+.+.++++++. .+.. |+ ++++. +...|-+- +-++.|.. ..++.
T Consensus 73 ~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-t~~~~~~~----~~~~g~d~-i~v~~g~~g~~~~~-- 144 (211)
T 3f4w_A 73 LFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVD-DLPARVRL----LEEAGADM-LAVHTGTDQQAAGR-- 144 (211)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCS-SHHHHHHH----HHHHTCCE-EEEECCHHHHHTTC--
T ss_pred HHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHH----HHHcCCCE-EEEcCCCcccccCC--
Confidence 555 699999987654 33 45666777789998875 3333 44 33333 34456554 44444321 00111
Q ss_pred CCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 177 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 177 ~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
.++..+..+++ + ++||.++. |.+ +.-+..+..+||+|+++=+-+.
T Consensus 145 ~~~~~i~~l~~~~~~~~i~~~g--------------------GI~---~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 145 KPIDDLITMLKVRRKARIAVAG--------------------GIS---SQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp CSHHHHHHHHHHCSSCEEEEES--------------------SCC---TTTHHHHHTTCCSEEEECHHHH
T ss_pred CCHHHHHHHHHHcCCCcEEEEC--------------------CCC---HHHHHHHHHcCCCEEEECHHHc
Confidence 24567788887 5 78987742 211 1224456788999999987653
No 113
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.05 E-value=0.85 Score=41.85 Aligned_cols=111 Identities=10% Similarity=0.073 Sum_probs=77.4
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..|++..++-+..++-++||.-++..+++ .++.+.+++..+.+ +.+|.| .++.- |++|+...++.|.+
T Consensus 7 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~-------~~~G~p---D~~~v-t~~em~~~~~~I~~ 75 (295)
T 1xg4_A 7 KAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAA-------GSLGLP---DLGIS-TLDDVLTDIRRITD 75 (295)
T ss_dssp HHHHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHH-------TTTCCC---SSSCS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhh-------hhcCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 45666667777888899999999999888 69999998875433 134666 55665 99999988877653
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCC-CcccHHHHHHHHHHcCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG-LRELIPCIARTAIAVGV 234 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g-~~~~~~~~a~aAva~GA 234 (290)
. .++||++|-+.+- | ..+.+...++..+..||
T Consensus 76 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~~v~~l~~aGa 108 (295)
T 1xg4_A 76 V-------------------------------CSLPLLVDADIGF----------------GSSAFNVARTVKSMIKAGA 108 (295)
T ss_dssp H-------------------------------CCSCEEEECTTCS----------------SSSHHHHHHHHHHHHHHTC
T ss_pred h-------------------------------CCCCEEecCCccc----------------CCCHHHHHHHHHHHHHcCC
Confidence 2 2468888877653 2 23333344445567899
Q ss_pred CEEEEeeeCCC
Q 022892 235 DGVFMEVHDDP 245 (290)
Q Consensus 235 ~G~~IEkH~t~ 245 (290)
.|+-||--..|
T Consensus 109 ~gv~iEd~~~~ 119 (295)
T 1xg4_A 109 AGLHIEDQVGA 119 (295)
T ss_dssp SEEEEECBCSS
T ss_pred eEEEECCCCCC
Confidence 99999976533
No 114
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.00 E-value=0.94 Score=42.35 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=75.4
Q ss_pred HHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEee--cCc-----ccHHH------------
Q 022892 42 ISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDV--HET-----VQCEE------------ 102 (290)
Q Consensus 42 ~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~--~d~-----~~~~~------------ 102 (290)
.+.++|+|+|+.-.|.- |-..+. .+ ......+..+.+.|++.|+|++.++ ++. .+.++
T Consensus 118 ~a~~~GADAVk~lv~~g-~d~~~e-~~-~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~ 194 (332)
T 3iv3_A 118 RLKEAGADAVKFLLYYD-VDGDPQ-VN-VQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAM 194 (332)
T ss_dssp HHHHTTCSEEEEEEEEC-TTSCHH-HH-HHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHH
T ss_pred HHHHcCCCEEEEEEEcC-CCchHH-HH-HHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHH
Confidence 34447999999877652 111000 00 0012457778889999999999987 332 22222
Q ss_pred --H--hh-hcceecccCC-cc-------------CCH----HHHHHHHhcCCeEE-EeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 103 --V--GK-VADIIQIPAF-LC-------------RQT----DLLVAAAKTGKIIN-IKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 103 --l--~~-~~d~~kIgs~-~~-------------~n~----~lL~~~a~~~~PVi-lstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
. .+ .+|++|+.-- ++ +.. .|-+.+..++.|++ |+-|. +.++++..++.....|.
T Consensus 195 R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~--~~~~fl~~v~~A~~aGa 272 (332)
T 3iv3_A 195 KVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV--SAELFQETLVFAHKAGA 272 (332)
T ss_dssp HHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC--CHHHHHHHHHHHHHHTC
T ss_pred HHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC--CHHHHHHHHHHHHHcCC
Confidence 2 23 4899999732 22 111 24344567899965 78885 58899999988777885
Q ss_pred C-cEEEEeecC
Q 022892 159 P-NVMVCERGT 168 (290)
Q Consensus 159 ~-~i~L~~~gs 168 (290)
. .=++|=|.+
T Consensus 273 ~f~Gv~~GRnv 283 (332)
T 3iv3_A 273 KFNGVLCGRAT 283 (332)
T ss_dssp CCCEEEECHHH
T ss_pred CcceEEeeHHH
Confidence 2 456666654
No 115
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=93.91 E-value=0.96 Score=38.96 Aligned_cols=187 Identities=12% Similarity=0.104 Sum_probs=95.7
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-- 92 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-- 92 (290)
.++.++.-+-+. +.....+.++.+ .+.|++++-...-+ .-..+. . ..+++.++++.+..+.++..
T Consensus 9 ~~~~i~p~i~a~-d~~~~~~~i~~~----~~~G~d~i~l~~~d--g~f~~~-~-----~~~~~~i~~l~~~~~~~~~v~l 75 (230)
T 1rpx_A 9 SDIIVSPSILSA-NFSKLGEQVKAI----EQAGCDWIHVDVMD--GRFVPN-I-----TIGPLVVDSLRPITDLPLDVHL 75 (230)
T ss_dssp TSCEEEEBGGGS-CGGGHHHHHHHH----HHTTCCCEEEEEEB--SSSSSC-B-----CCCHHHHHHHGGGCCSCEEEEE
T ss_pred CceEEEEEeecC-CHHHHHHHHHHH----HHCCCCEEEEeecc--CCcccc-c-----ccCHHHHHHHHhccCCcEEEEE
Confidence 444455543333 444344444444 45799887665311 000011 1 12234444444444555444
Q ss_pred eecCcc-cHHHHhh-hcceecccCC--ccCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec
Q 022892 93 DVHETV-QCEEVGK-VADIIQIPAF--LCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 93 ~~~d~~-~~~~l~~-~~d~~kIgs~--~~~n-~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
-+.|+. .++.+.+ .+|++.++.. .... ..+++++.+.++.+++...+. |..|...++. .+- +.+++-..
T Consensus 76 ~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~-t~~e~~~~~~----~~~-d~vl~~~~ 149 (230)
T 1rpx_A 76 MIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPG-TPLTAIEYVL----DAV-DLVLIMSV 149 (230)
T ss_dssp ESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTT-CCGGGGTTTT----TTC-SEEEEESS
T ss_pred EecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHH----hhC-CEEEEEEE
Confidence 344432 4555555 6999998887 4433 346677767788888887655 5555443321 233 44544432
Q ss_pred CCCCCCCCCCC---chhHHHHHh-c-----CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEE
Q 022892 168 TMFGYNDLIVD---PRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 238 (290)
Q Consensus 168 s~~~y~~~~~d---L~~i~~lk~-~-----~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~ 238 (290)
. +++.....+ +..+..+++ . ++||+++. |.+ +.-+..++++||+|++
T Consensus 150 ~-pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~G--------------------GI~---~~n~~~~~~aGad~vv 205 (230)
T 1rpx_A 150 N-PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDG--------------------GVG---PKNAYKVIEAGANALV 205 (230)
T ss_dssp C-TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEES--------------------SCC---TTTHHHHHHHTCCEEE
T ss_pred c-CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEEC--------------------CCC---HHHHHHHHHcCCCEEE
Confidence 2 223222222 344455665 4 78887742 211 1113335677999999
Q ss_pred EeeeCC
Q 022892 239 MEVHDD 244 (290)
Q Consensus 239 IEkH~t 244 (290)
+=+-++
T Consensus 206 vgSaI~ 211 (230)
T 1rpx_A 206 AGSAVF 211 (230)
T ss_dssp ESHHHH
T ss_pred EChhhh
Confidence 987764
No 116
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.87 E-value=0.058 Score=48.89 Aligned_cols=173 Identities=17% Similarity=0.155 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHcCCCEEecc-ccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcc
Q 022892 33 MRMAKHIKSISTKVGLPLVFKS-SFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VAD 108 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~-~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d 108 (290)
.++|+.+.+ .|+++|-.. ....+++ .+.|......++.++++++..++|++.. +.+.+.++.+.+ .+|
T Consensus 31 ~~~a~~~~~----~Ga~~i~~~e~v~~~~~----~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad 102 (297)
T 2zbt_A 31 PEQAVIAEE----AGAVAVMALERVPADIR----AQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVD 102 (297)
T ss_dssp HHHHHHHHH----HTCSEEEECSSCHHHHH----HTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCS
T ss_pred HHHHHHHHH----CCCcEEEeccccchHHH----hhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCC
Confidence 566666665 599887431 1110001 1222112234667888888899998753 344566666666 688
Q ss_pred eecccCCccCCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEee--cCC---------------
Q 022892 109 IIQIPAFLCRQTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCER--GTM--------------- 169 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~--gs~--------------- 169 (290)
++ .+++..+..++++.+.+. +.|+... .. +++++..+ ...|.+. +.+|- ++.
T Consensus 103 ~v-~~~~~~~~~~~~~~~~~~~~~i~l~~~--v~-~~~~~~~a----~~~Gad~-I~v~G~~~~g~~~e~~~~~~~~~~~ 173 (297)
T 2zbt_A 103 FI-DESEVLTPADEEHHIDKWKFKVPFVCG--AR-NLGEALRR----IAEGAAM-IRTKGEAGTGNVVEAVRHARTMWKE 173 (297)
T ss_dssp EE-EEETTSCCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHH----HHTTCSE-EEECCCSSSCCTHHHHHHHHHHHHH
T ss_pred EE-eeeCCCChHHHHHHHHHhCCCceEEee--cC-CHHHHHHH----HHcCCCE-EEEcccccCcchHHHHhhHHHHHHH
Confidence 88 555544444444444332 6676654 33 78887664 3456544 44441 000
Q ss_pred ----CCCCC---------CCCCchhHHHHHh-cCCCEE--EeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 022892 170 ----FGYND---------LIVDPRNLEWMRE-ANCPVV--ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 233 (290)
Q Consensus 170 ----~~y~~---------~~~dL~~i~~lk~-~~~pV~--~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G 233 (290)
++|+. ...++..+..+++ .++||+ .+. ++ .. ..-+..+..+|
T Consensus 174 i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~G--GI---------------~~-----~e~i~~~~~aG 231 (297)
T 2zbt_A 174 IRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAG--GI---------------AT-----PADAALMMHLG 231 (297)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCS--SC---------------CS-----HHHHHHHHHTT
T ss_pred HHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeC--CC---------------CC-----HHHHHHHHHcC
Confidence 00111 1245667778877 688876 432 11 01 33444567789
Q ss_pred CCEEEEeeeCC
Q 022892 234 VDGVFMEVHDD 244 (290)
Q Consensus 234 A~G~~IEkH~t 244 (290)
|+|+++=+-+.
T Consensus 232 adgvvvGsai~ 242 (297)
T 2zbt_A 232 MDGVFVGSGIF 242 (297)
T ss_dssp CSEEEECGGGG
T ss_pred CCEEEEchHHh
Confidence 99999988763
No 117
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=93.84 E-value=4 Score=37.56 Aligned_cols=133 Identities=20% Similarity=0.087 Sum_probs=71.5
Q ss_pred HHHHHHHH-hcCCeEEEeC-CCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCCC-C-------------CCCCCCchhH
Q 022892 120 TDLLVAAA-KTGKIINIKK-GQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMFG-Y-------------NDLIVDPRNL 182 (290)
Q Consensus 120 ~~lL~~~a-~~~~PVilst-G~~~tl~e~~~Ave~i~~~Gn~~i~L~-~~gs~~~-y-------------~~~~~dL~~i 182 (290)
.+.++++- ..++||++|- |...+.+++..+ ...|-+-|++. |-|+.+. . ..-......+
T Consensus 167 ~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a----~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l 242 (349)
T 1p0k_A 167 LKRIEQICSRVSVPVIVKEVGFGMSKASAGKL----YEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASL 242 (349)
T ss_dssp HHHHHHHHHHCSSCEEEEEESSCCCHHHHHHH----HHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCHHHHHHH----HHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHH
Confidence 35566664 4689999995 654577776554 34677666665 4332110 0 0001123345
Q ss_pred HHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHH
Q 022892 183 EWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRN 260 (290)
Q Consensus 183 ~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~ 260 (290)
..+++ . ++||+.+..=.. ..-+..++++||++++|=+-+.-... .+++. --.+.
T Consensus 243 ~~v~~~~~~ipvia~GGI~~----------------------~~d~~k~l~~GAd~V~iG~~~l~~~~-~~g~~-~~~~~ 298 (349)
T 1p0k_A 243 AEIRSEFPASTMIASGGLQD----------------------ALDVAKAIALGASCTGMAGHFLKALT-DSGEE-GLLEE 298 (349)
T ss_dssp HHHHHHCTTSEEEEESSCCS----------------------HHHHHHHHHTTCSEEEECHHHHHHHH-HHHHH-HHHHH
T ss_pred HHHHHhcCCCeEEEECCCCC----------------------HHHHHHHHHcCCCEEEEcHHHHHHHh-hcCHH-HHHHH
Confidence 55555 4 799988544221 23345668899999999875421100 01100 00134
Q ss_pred HHHHHHHHHHHHHHhCCccc
Q 022892 261 LEELLEELVAIAKVSKGKQR 280 (290)
Q Consensus 261 l~~lv~~ir~~~~~lg~~~~ 280 (290)
++.+++.++..-...|.+.+
T Consensus 299 ~~~~~~~l~~~m~~~G~~~i 318 (349)
T 1p0k_A 299 IQLILEELKLIMTVLGARTI 318 (349)
T ss_dssp HHHHHHHHHHHHHHHTCCBH
T ss_pred HHHHHHHHHHHHHHhCCCCH
Confidence 66777777777777776444
No 118
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=93.67 E-value=2.9 Score=41.60 Aligned_cols=193 Identities=10% Similarity=0.073 Sum_probs=114.6
Q ss_pred CCeEEEEc-cCCc-----------cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHH
Q 022892 15 EPFFLLAG-PNVI-----------ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKV 82 (290)
Q Consensus 15 ~~~~iIAg-pcsi-----------en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~ 82 (290)
.++.+|.| .++- .+.+..++.|+++++ .||+++=-. | + ......++.++++...
T Consensus 313 ~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~----~GAdiIDIg-----p----g-~~~v~~~ee~~rvv~~ 378 (566)
T 1q7z_A 313 DHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVE----KGAEVLDVN-----F----G-IESQIDVRYVEKIVQT 378 (566)
T ss_dssp SSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHH----TTCSEEEEE-----C----S-SGGGSCHHHHHHHHHH
T ss_pred ccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHH----CCCCEEEEC-----C----C-CCCCCHHHHHHHHHHH
Confidence 56788888 4431 134667777777776 599987654 1 1 1111114555554433
Q ss_pred -HHhcCCcEEEeecCcccHHHHhhh---ccee-cccCCccCC-HHHHHHHHhcCCeEEEeCC---CCCC----HHHHHHH
Q 022892 83 -KIAYDIPIVTDVHETVQCEEVGKV---ADII-QIPAFLCRQ-TDLLVAAAKTGKIINIKKG---QFCA----SSVMVNS 149 (290)
Q Consensus 83 -~~~~Gi~~~s~~~d~~~~~~l~~~---~d~~-kIgs~~~~n-~~lL~~~a~~~~PVilstG---~~~t----l~e~~~A 149 (290)
.++.++|+.-+-++++.++...+. .+++ -|...+ .+ ..++..+++.+.||++..- +..| ++...+.
T Consensus 379 i~~~~~vpisIDT~~~~v~eaal~~~~G~~iINdis~~~-~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~ 457 (566)
T 1q7z_A 379 LPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDE-EELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKA 457 (566)
T ss_dssp HHHHTCSCEEEECCCHHHHHHHHHHCSSCCEEEEEESCH-HHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHH
T ss_pred HHhhCCceEEEeCCCHHHHHHHHHhcCCCCEEEECCcch-hhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHH
Confidence 345699999999999888876553 4442 233322 11 4567778899999999653 2223 5556667
Q ss_pred HHHHHHcCCCcEEEEeecC---CCCCCCCCCCc---hhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCC--Cccc
Q 022892 150 AEKVRLAGNPNVMVCERGT---MFGYNDLIVDP---RNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG--LREL 221 (290)
Q Consensus 150 ve~i~~~Gn~~i~L~~~gs---~~~y~~~~~dL---~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g--~~~~ 221 (290)
++.+.+.|-++=+++..|. .|+. -|+ +.+..++++++|+.+-.|. .|.+ .++.
T Consensus 458 ~~~a~~~Gi~~~IilDPg~~~igfgk----~~~~~l~~~~~~~~~g~p~l~G~Sn---------------ksf~~~~~~~ 518 (566)
T 1q7z_A 458 LKILERHDFSDRVIFDPGVLPLGAEG----KPVEVLKTIEFISSKGFNTTVGLSN---------------LSFGLPDRSY 518 (566)
T ss_dssp HHHHHHTTCGGGEEEECCCCCTTTTC----CHHHHHHHHHHHHHTTCEECCBGGG---------------GSTTSTTHHH
T ss_pred HHHHHHCCCCCcEEEeCCCCcccCcH----HHHHHHHHHHHHHhCCCCEEEEeCc---------------ccccCCHHHH
Confidence 7778888853337788887 3433 244 4455555568998653222 1111 1333
Q ss_pred HH-HHHHHHHHcCCCEEEEeeeC
Q 022892 222 IP-CIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 222 ~~-~~a~aAva~GA~G~~IEkH~ 243 (290)
+. ..+..|+..|++ ++=.|.
T Consensus 519 l~~t~a~~a~~~G~~--i~rvh~ 539 (566)
T 1q7z_A 519 YNTAFLVLGISKGLS--SAIMNP 539 (566)
T ss_dssp HHHHHHHHHHHTTCC--EEEECT
T ss_pred HHHHHHHHHHHcCCC--EEEECC
Confidence 22 234457889999 555585
No 119
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.60 E-value=1.1 Score=41.35 Aligned_cols=139 Identities=18% Similarity=0.186 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
..-..|++..++-+..++-++||..++..+++ .+|.+.+|+..+.+ . .|.| .++.- |++|+...+..
T Consensus 16 ~~a~~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~-~-------~G~p---D~~~v-t~~em~~~~~~ 83 (305)
T 3ih1_A 16 ELANRFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTA-S-------KGLP---DLGIV-TSTEVAERARD 83 (305)
T ss_dssp HHHHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHH-H-------HTCC---SSSCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHH-h-------CCCC---CCCcC-CHHHHHHHHHH
Confidence 34456777777777888889999999999888 69999999865553 1 2544 44555 89999877765
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 022892 153 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 232 (290)
Q Consensus 153 i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~ 232 (290)
|.+. .++||++|-+.+- |..+.+....+.-...
T Consensus 84 I~r~-------------------------------~~~pviaD~d~Gy----------------g~~~~v~~~v~~l~~a 116 (305)
T 3ih1_A 84 LVRA-------------------------------TDLPVLVDIDTGF----------------GGVLNVARTAVEMVEA 116 (305)
T ss_dssp HHHH-------------------------------HCCCEEEECTTCS----------------SSHHHHHHHHHHHHHT
T ss_pred HHHh-------------------------------cCCCEEEECCCCC----------------CCHHHHHHHHHHHHHh
Confidence 5421 2468888877652 2233333344445678
Q ss_pred CCCEEEEeeeCCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 233 GVDGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 233 GA~G~~IEkH~t~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
||.|+-||--..|.|-- .+++.-.+. +++++.|+.+..+
T Consensus 117 Gaagv~iED~~~~krcGh~~gk~l~~~---~e~~~rI~Aa~~A 156 (305)
T 3ih1_A 117 KVAAVQIEDQQLPKKCGHLNGKKLVTT---EELVQKIKAIKEV 156 (305)
T ss_dssp TCSEEEEECBCSSCCTTCTTCCCBCCH---HHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCcccCCCCCCcccCH---HHHHHHHHHHHHc
Confidence 99999999775554421 133333333 3556666666555
No 120
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.56 E-value=0.26 Score=44.12 Aligned_cols=75 Identities=11% Similarity=0.041 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccC----CHHHHHHHHh-c-----CCeEEEeCCCCCC
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCR----QTDLLVAAAK-T-----GKIINIKKGQFCA 142 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~----n~~lL~~~a~-~-----~~PVilstG~~~t 142 (290)
+.++.+.+.++++|+.++.++++.++++...+ ..+++-|+.++.+ ++..++.+.+ . +.||+-.-|.. |
T Consensus 141 ~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~-s 219 (254)
T 1vc4_A 141 ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYS-R 219 (254)
T ss_dssp GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCC-S
T ss_pred HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCC-C
Confidence 45777888888999999999999998887766 6899999887763 3333333322 2 67999999988 8
Q ss_pred HHHHHHH
Q 022892 143 SSVMVNS 149 (290)
Q Consensus 143 l~e~~~A 149 (290)
++++...
T Consensus 220 ~~dv~~l 226 (254)
T 1vc4_A 220 KEELKAL 226 (254)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9988763
No 121
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=93.53 E-value=0.95 Score=43.97 Aligned_cols=175 Identities=14% Similarity=0.069 Sum_probs=108.7
Q ss_pred hhHHhhhc-CCCCeEEEEccCCccCHHHHHHHHHHHHHHHH-----HcCCCEEeccccccCCCCCcccCCCCChhHHHHH
Q 022892 5 TALFNQLK-AAEPFFLLAGPNVIESEEHIMRMAKHIKSIST-----KVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78 (290)
Q Consensus 5 ~~~~~~i~-~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~-----~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~ 78 (290)
|.||+-=+ .-+|+.+-.+++-..+.+..-+..+++.+... +.|+|.|....-. -. .+-+.+
T Consensus 79 tvL~rhE~tf~n~p~ia~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s------------~d-pe~~~~ 145 (446)
T 4djd_C 79 TELFRHDKRFYHETAIAIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDA------------DD-PAAFKA 145 (446)
T ss_dssp CCSSGGGSCCCSCCEEEEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCS------------SS-THHHHH
T ss_pred eeEEeCCcCCCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCC------------CC-HHHHHH
Confidence 44555444 34666777788775555555566665554332 2335554432111 11 233444
Q ss_pred -HHHHHHhcCCcEEEeecCcccHHHHhhh-cce-ecccCCccCCHH-HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 79 -LEKVKIAYDIPIVTDVHETVQCEEVGKV-ADI-IQIPAFLCRQTD-LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 79 -L~~~~~~~Gi~~~s~~~d~~~~~~l~~~-~d~-~kIgs~~~~n~~-lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
++++.+..++|+.-+-+|++.++...+. .+. --|.|.+-.|++ +...+++.+.||++... .++...+.++.+.
T Consensus 146 vVk~V~e~~dvPL~IDS~dpevleaALea~a~~~plI~sat~dn~e~m~~lAa~y~~pVi~~~~---dl~~lkelv~~a~ 222 (446)
T 4djd_C 146 AVASVAAATQLNLVLMADDPDVLKEALAGVADRKPLLYAATGANYEAMTALAKENNCPLAVYGN---GLEELAELVDKIV 222 (446)
T ss_dssp HHHHHHTTCCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECTTTHHHHHHHHHHTTCCEEEECS---SHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEecCCHHHHHHHHHhhcCcCCeeEecchhhHHHHHHHHHHcCCcEEEEec---cHHHHHHHHHHHH
Confidence 5566678999999999999998887763 231 234444556874 66777889999999865 7999999999999
Q ss_pred HcCCCcEEEEeecC-CCCCCCCCCCchhHHHH------HhcCCCEEEeCCC
Q 022892 155 LAGNPNVMVCERGT-MFGYNDLIVDPRNLEWM------REANCPVVADVTH 198 (290)
Q Consensus 155 ~~Gn~~i~L~~~gs-~~~y~~~~~dL~~i~~l------k~~~~pV~~D~sH 198 (290)
+.|-++| ++.-|+ .+.|.. +.++ .+..+ +.+++||+...+.
T Consensus 223 ~~GI~~I-vLDPG~~g~~~t~-~~~~-~iRr~AL~~~d~~LgyPvi~~~sr 270 (446)
T 4djd_C 223 ALGHKQL-VLDPGARETSRAI-ADFT-QIRRLAIKKRFRSFGYPIIALTTA 270 (446)
T ss_dssp HTTCCCE-EEECCCCSHHHHH-HHHH-HHHHHHHHSCCGGGCSCBEEECCC
T ss_pred HCCCCcE-EECCCchhHHHHH-HHHH-HHHHHhhhccCcccCCCEEeccCC
Confidence 9998765 677777 332211 1121 11222 2268999876655
No 122
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.52 E-value=1.3 Score=41.11 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=79.0
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.|++..++-+..++-++||.-++..+++ .+|.+.+++..+.+. .+|.| .++.- |++|+...++.|.+.
T Consensus 30 ~lr~l~~~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~-------~lG~p---D~~~v-t~~em~~~~~~I~r~ 98 (318)
T 1zlp_A 30 TMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAA-------MLGLP---DFGLL-TTTEVVEATRRITAA 98 (318)
T ss_dssp HHHHHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHH-------HHCCC---SSSCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhH-------hcCCC---CCCCC-CHHHHHHHHHHHHhh
Confidence 4666666777888999999999999988 699999998765542 23666 45555 999999988776532
Q ss_pred CCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCE
Q 022892 157 GNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236 (290)
Q Consensus 157 Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G 236 (290)
- .++||++|-+.+- |..+.+...++..+..||.|
T Consensus 99 ~------------------------------~~~PviaD~d~Gy----------------g~~~~v~~tv~~l~~aGaag 132 (318)
T 1zlp_A 99 A------------------------------PNLCVVVDGDTGG----------------GGPLNVQRFIRELISAGAKG 132 (318)
T ss_dssp S------------------------------SSSEEEEECTTCS----------------SSHHHHHHHHHHHHHTTCCE
T ss_pred c------------------------------cCCCEEEeCCCCC----------------CCHHHHHHHHHHHHHcCCcE
Confidence 1 0579999988763 32333344455556789999
Q ss_pred EEEeeeCC
Q 022892 237 VFMEVHDD 244 (290)
Q Consensus 237 ~~IEkH~t 244 (290)
+-||--..
T Consensus 133 v~iED~~~ 140 (318)
T 1zlp_A 133 VFLEDQVW 140 (318)
T ss_dssp EEEECBCS
T ss_pred EEECCCCC
Confidence 99997654
No 123
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.51 E-value=0.83 Score=40.92 Aligned_cols=84 Identities=19% Similarity=0.214 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeecC----------cccHHH----Hhh-hcceecccCCccCCHHHHHHHH-hcCC-eEEEe
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHE----------TVQCEE----VGK-VADIIQIPAFLCRQTDLLVAAA-KTGK-IINIK 136 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d----------~~~~~~----l~~-~~d~~kIgs~~~~n~~lL~~~a-~~~~-PVils 136 (290)
+.+..+++.|+++|++++.+.+- ++.+.. ..+ .+|++|++.. .+.+.++++. ..+. ||+.+
T Consensus 125 ~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~--~~~e~~~~~~~~~~~~pV~as 202 (263)
T 1w8s_A 125 EELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT--GDPKTFSWAVKVAGKVPVLMS 202 (263)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC--SSHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC--CCHHHHHHHHHhCCCCeEEEE
Confidence 45667888889999999988753 233332 223 5999999942 3566667654 4577 99999
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCC
Q 022892 137 KGQFC-ASSVMVNSAEKVRLAGNP 159 (290)
Q Consensus 137 tG~~~-tl~e~~~Ave~i~~~Gn~ 159 (290)
=|... +.++.++-+..+...|..
T Consensus 203 GGi~~~~~~~~l~~i~~~~~aGA~ 226 (263)
T 1w8s_A 203 GGPKTKTEEDFLKQVEGVLEAGAL 226 (263)
T ss_dssp CCSCCSSHHHHHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCe
Confidence 99875 688888777777778875
No 124
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.46 E-value=1.3 Score=40.24 Aligned_cols=135 Identities=16% Similarity=0.120 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.|++..++ + .++-++||.-++..+++ .++.+.+++..+.+ ..|.| .++.- |++|+...++.|...
T Consensus 9 ~lr~l~~~-~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~--------~~G~p---D~~~v-t~~em~~~~~~I~~~ 74 (275)
T 2ze3_A 9 SFHALHQT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH--------ARGRT---DGQTL-TRDEMGREVEAIVRA 74 (275)
T ss_dssp HHHHHHHH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHH--------HSCCC---SSSSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-C-eeEecccCHHHHHHHHHcCCCEEEECcHHHHH--------hCCCC---CCCCC-CHHHHHHHHHHHHhh
Confidence 45555555 7 78889999999999988 69999999765543 24655 34555 899998888766532
Q ss_pred CCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCE
Q 022892 157 GNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236 (290)
Q Consensus 157 Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G 236 (290)
.++||+.|-+.+- ++..+.+...++.-+..||.|
T Consensus 75 -------------------------------~~~pviaD~d~Gy---------------g~~~~~~~~~v~~l~~aGaag 108 (275)
T 2ze3_A 75 -------------------------------VAIPVNADIEAGY---------------GHAPEDVRRTVEHFAALGVAG 108 (275)
T ss_dssp -------------------------------CSSCEEEECTTCS---------------SSSHHHHHHHHHHHHHTTCSE
T ss_pred -------------------------------cCCCEEeecCCCC---------------CCCHHHHHHHHHHHHHcCCcE
Confidence 1357777777652 112223333444445678888
Q ss_pred EEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 237 VFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 237 ~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+-||--..+ .++.-.+.+++.+-++.++.....+|.
T Consensus 109 v~iED~~~~-----~~k~l~~~~e~~~~I~aa~~a~~~~g~ 144 (275)
T 2ze3_A 109 VNLEDATGL-----TPTELYDLDSQLRRIEAARAAIDASGV 144 (275)
T ss_dssp EEEECBCSS-----SSSCBCCHHHHHHHHHHHHHHHHHHTS
T ss_pred EEECCCcCC-----CCCccCCHHHHHHHHHHHHHhHhhcCC
Confidence 888854321 233444555555555555554443343
No 125
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=93.43 E-value=0.39 Score=45.42 Aligned_cols=135 Identities=15% Similarity=0.005 Sum_probs=72.1
Q ss_pred HHHHHHH-hcCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CC-C---C-----CC-CCCC---chhHHH
Q 022892 121 DLLVAAA-KTGKIINIK-KGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MF-G---Y-----ND-LIVD---PRNLEW 184 (290)
Q Consensus 121 ~lL~~~a-~~~~PVils-tG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~~-~---y-----~~-~~~d---L~~i~~ 184 (290)
+.++++. .+++||++| .|...+.++.+.++ ..|-+-|.+--+|. ++ . + .. .+.- ..+++.
T Consensus 196 ~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~----~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~ 271 (365)
T 3sr7_A 196 KHLSDYAKKLQLPFILKEVGFGMDVKTIQTAI----DLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLN 271 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECSSCCCHHHHHHHH----HHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHHHHH----HcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHH
Confidence 5667664 469999999 55445777766654 45765555543333 22 0 0 00 0111 134444
Q ss_pred HHhc--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHH
Q 022892 185 MREA--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLE 262 (290)
Q Consensus 185 lk~~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~ 262 (290)
.+.. .+||+.|..=. .| ..++ .|+++||++++|=+-+--. ..+.+. .--.+.++
T Consensus 272 v~~~~~~ipvia~GGI~----------------~g-----~Dv~-KaLalGAdaV~ig~~~l~a-~~~~G~-~~v~~~l~ 327 (365)
T 3sr7_A 272 AQPLMDKVEILASGGIR----------------HP-----LDII-KALVLGAKAVGLSRTMLEL-VEQHSV-HEVIAIVN 327 (365)
T ss_dssp HGGGTTTSEEEECSSCC----------------SH-----HHHH-HHHHHTCSEEEESHHHHHH-HHHSCH-HHHHHHHH
T ss_pred HHHhcCCCeEEEeCCCC----------------CH-----HHHH-HHHHcCCCEEEECHHHHHH-HHhcCh-HHHHHHHH
Confidence 4442 67898743211 12 3444 5688999999997754100 000110 00013567
Q ss_pred HHHHHHHHHHHHhCCcccccc
Q 022892 263 ELLEELVAIAKVSKGKQRMNI 283 (290)
Q Consensus 263 ~lv~~ir~~~~~lg~~~~~~~ 283 (290)
.+.++++.+-..+|.+++-++
T Consensus 328 ~l~~eL~~~m~~~G~~si~eL 348 (365)
T 3sr7_A 328 GWKEDLRLIMCALNCQTIAEL 348 (365)
T ss_dssp HHHHHHHHHHHHTTCSSTGGG
T ss_pred HHHHHHHHHHHHhCCcCHHHh
Confidence 777888888888888665444
No 126
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.40 E-value=0.21 Score=45.74 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=60.3
Q ss_pred HHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|++-+. .+.+. +++ .+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|.+..++..++.
T Consensus 70 a~~~a~~~g~~~~y-----~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 144 (393)
T 4fb5_A 70 AEARAGEFGFEKAT-----ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERS 144 (393)
T ss_dssp HHHHHHHHTCSEEE-----SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHS
T ss_pred HHHHHHHhCCCeec-----CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhc
Confidence 45677889997432 23344 444 699999999999999999999999999999999999999999988876655
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 145 g 145 (393)
T 4fb5_A 145 G 145 (393)
T ss_dssp S
T ss_pred C
Confidence 4
No 127
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=93.38 E-value=0.25 Score=44.44 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh--cceecccCCccCC----HHHHHHHH-hc--CCeEEEeCCCCCCHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV--ADIIQIPAFLCRQ----TDLLVAAA-KT--GKIINIKKGQFCASS 144 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~--~d~~kIgs~~~~n----~~lL~~~a-~~--~~PVilstG~~~tl~ 144 (290)
+.++.|.++++++|+.++.++++.+.++.+.+. ++++-|=-++... +.....+. .. +.+++-..|.. |.+
T Consensus 137 ~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~-t~e 215 (251)
T 1i4n_A 137 EQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIK-DPR 215 (251)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-CGG
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCC-CHH
Confidence 679999999999999999999999999887654 7888777666522 22222222 22 44666666666 777
Q ss_pred HHHHHHH
Q 022892 145 VMVNSAE 151 (290)
Q Consensus 145 e~~~Ave 151 (290)
++..+.+
T Consensus 216 dv~~~~~ 222 (251)
T 1i4n_A 216 ELKDLRG 222 (251)
T ss_dssp GHHHHTT
T ss_pred HHHHHHH
Confidence 7766543
No 128
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=93.31 E-value=2.1 Score=37.86 Aligned_cols=170 Identities=16% Similarity=0.177 Sum_probs=99.2
Q ss_pred HHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCcc-CCHHH
Q 022892 44 TKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLC-RQTDL 122 (290)
Q Consensus 44 ~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~-~n~~l 122 (290)
.++|.|+++-+.= .+...+.-++.++++. +.++|++-.|.+++++ ...+|.+-++|=.. +|..+
T Consensus 28 ~~~GtD~i~vGGs-----------~gvt~~~~~~~v~~ik-~~~~Pvvlfp~~~~~v---~~gaD~~l~pslln~~~~~~ 92 (228)
T 3vzx_A 28 CESGTDAVIIGGS-----------DGVTEDNVLRMMSKVR-RFLVPCVLEVSAIEAI---VPGFDLYFIPSVLNSKNADW 92 (228)
T ss_dssp HTSSCSEEEECCC-----------SCCCHHHHHHHHHHHT-TSSSCEEEECSCGGGC---CSCCSEEEEEEETTBSSGGG
T ss_pred HHcCCCEEEECCc-----------CCCCHHHHHHHHHHhh-ccCCCEEEeCCCHHHc---cccCCEEEEeeecCCCCcch
Confidence 3689999988641 1222223344444444 4999999999998654 45789888887544 45555
Q ss_pred H-----HHHHhcC------CeEE----EeCCCC-----------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCC
Q 022892 123 L-----VAAAKTG------KIIN----IKKGQF-----------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLI 176 (290)
Q Consensus 123 L-----~~~a~~~------~PVi----lstG~~-----------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~ 176 (290)
+ +.+.+.| .+|- +=++.+ .+++++..-+..-.--| -+++=++- + +-+
T Consensus 93 i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g-~~~VYld~-s--G~~--- 165 (228)
T 3vzx_A 93 IVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQ-LPIFYLEY-S--GVL--- 165 (228)
T ss_dssp TTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTT-CSEEEEEC-T--TSC---
T ss_pred hhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcC-CCEEEecC-C--CCc---
Confidence 4 5565566 3333 233333 02255433332222122 34555554 3 111
Q ss_pred CCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCC
Q 022892 177 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 254 (290)
Q Consensus 177 ~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~ 254 (290)
.|+..+..+++ . ++||.+- + |.+. +..++.+. .||||+++=+-+.-
T Consensus 166 ~~~~~i~~i~~~~~~~Pv~vG----------------G----GI~t--~e~a~~~~-~gAD~VVVGSa~v~--------- 213 (228)
T 3vzx_A 166 GDIEAVKKTKAVLETSTLFYG----------------G----GIKD--AETAKQYA-EHADVIVVGNAVYE--------- 213 (228)
T ss_dssp CCHHHHHHHHHHCSSSEEEEE----------------S----SCCS--HHHHHHHH-TTCSEEEECTHHHH---------
T ss_pred CCHHHHHHHHHhcCCCCEEEe----------------C----CCCC--HHHHHHHH-hCCCEEEEChHHhc---------
Confidence 27788888988 7 7998771 1 2111 34455444 69999999877632
Q ss_pred CCChHHHHHHHHHHH
Q 022892 255 QWPLRNLEELLEELV 269 (290)
Q Consensus 255 sl~p~~l~~lv~~ir 269 (290)
+|+.++++++.++
T Consensus 214 --~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 214 --DFDRALKTVAAVK 226 (228)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHh
Confidence 4777788877664
No 129
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=93.30 E-value=1.6 Score=42.26 Aligned_cols=188 Identities=13% Similarity=0.080 Sum_probs=112.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHH-HcC----CCEEeccccccCCCCCcccCCCCChhHHHHH-HHHHHHhcC
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSIST-KVG----LPLVFKSSFDKANRTSSKSFRGPGMVEGLKI-LEKVKIAYD 87 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~-~~G----~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~-L~~~~~~~G 87 (290)
-+|+-|.++++-.-+.+...+..+...+.+. +.| +|+|-..... -. .+.+.+ ++.+.+..+
T Consensus 89 ~np~~ia~eI~D~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~------------~d-pe~~~~~Vk~V~e~~d 155 (445)
T 2h9a_A 89 EHPCGLAILVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSS------------QD-AATFAKAVATAREVTD 155 (445)
T ss_dssp CSCCEEEEEEETTSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTT------------CC-HHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEEecCCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCC------------CC-HHHHHHHHHHHHHhcC
Confidence 4577788887753344444444444332211 234 6766554311 11 356676 445556679
Q ss_pred CcEEEeecCcccHHHHhh-hcc---eecccCCccCCHH-HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 022892 88 IPIVTDVHETVQCEEVGK-VAD---IIQIPAFLCRQTD-LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 88 i~~~s~~~d~~~~~~l~~-~~d---~~kIgs~~~~n~~-lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~ 162 (290)
+|+.-+ +|++.++...+ ..+ ++ .|-+-.|++ ++..+.+.+.||++... +++..++-++.+.+.|-++|+
T Consensus 156 vPlsID-~dp~vleaale~~~d~~pLI--ns~t~en~~~~~~la~~y~~~vV~~~~---~l~~l~~lv~~a~~~Gi~~Ii 229 (445)
T 2h9a_A 156 LPFILI-GTPEQLAAALETEGANNPLL--YAATADNYEQMVELAKKYNVPLTVSAK---GLDALAELVQKITALGYKNLI 229 (445)
T ss_dssp SCEEEE-SCHHHHHHHHHHHGGGCCEE--EEECTTTHHHHHHHHHHHTCCEEEECS---SHHHHHHHHHHHHHTTCCCEE
T ss_pred CCEEEE-CCHHHHHHHHHhcCCCCCEE--EECCHHHHHHHHHHHHHhCCeEEEEcC---CHHHHHHHHHHHHHCCCCcEE
Confidence 999999 99999888776 344 33 222333654 55667788999999764 799999999999999988877
Q ss_pred EEeecCC-CCCCCCCCCchhHHHH--H-h---cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 163 VCERGTM-FGYNDLIVDPRNLEWM--R-E---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 163 L~~~gs~-~~y~~~~~dL~~i~~l--k-~---~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
+.-++. +.+.- -|+..|..+ + . +++|++...+.- +.+ +-..+|..++..||+
T Consensus 230 -LDP~~~~~~~sl--~~~~~IR~~al~~~d~~lg~P~i~~vs~~-----------------d~~-~ea~lA~~~~~~Gas 288 (445)
T 2h9a_A 230 -LDPQPENISEGL--FYQTQIRRLAIKKLFRPFGYPTIAFALDE-----------------NPY-QAVMEASVYIAKYAG 288 (445)
T ss_dssp -EECCCSSHHHHH--HHHHHHHHHHHHSCCGGGCSCBEEECCCS-----------------SHH-HHHHHHHHHHHTTCS
T ss_pred -EcCCchhHHHHH--HHHHHHHHhhhcCCCcccCCCeeecCCch-----------------hHH-HHHHHHHHHHHcCCe
Confidence 565542 22211 134444443 1 1 467887766543 212 223344455789999
Q ss_pred EEEEeee
Q 022892 236 GVFMEVH 242 (290)
Q Consensus 236 G~~IEkH 242 (290)
+|+=.|
T Consensus 289 -Il~~~~ 294 (445)
T 2h9a_A 289 -IIVLNT 294 (445)
T ss_dssp -EEEECC
T ss_pred -EEEecC
Confidence 444444
No 130
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=93.28 E-value=0.42 Score=45.85 Aligned_cols=111 Identities=17% Similarity=0.250 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHHHH-HHHcCCCEEeccc-cccCCCCCcccCC--CCChhHHHHHHHHHHHhcCCcEEE--ee-------
Q 022892 28 SEEHIMRMAKHIKSI-STKVGLPLVFKSS-FDKANRTSSKSFR--GPGMVEGLKILEKVKIAYDIPIVT--DV------- 94 (290)
Q Consensus 28 n~~~~le~Ak~L~~~-a~~~G~~~V~~~~-~~k~~rts~~~~~--g~~~~~~l~~L~~~~~~~Gi~~~s--~~------- 94 (290)
|++..+++|+.|++. .+++|...|.... +....|...+.+. .-.+..|++.|.++.++.|+.|-- ++
T Consensus 34 ~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~ 113 (404)
T 3hg3_A 34 SEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG 113 (404)
T ss_dssp SHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSSBCTTS
T ss_pred CHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCccccCC
Confidence 899999999998764 3467988766553 3322454433332 111246999999999999999864 11
Q ss_pred ------cCcccHHHHhh-hcceecccCCccCCH--------HHHHHHHhcCCeEEEeCC
Q 022892 95 ------HETVQCEEVGK-VADIIQIPAFLCRQT--------DLLVAAAKTGKIINIKKG 138 (290)
Q Consensus 95 ------~d~~~~~~l~~-~~d~~kIgs~~~~n~--------~lL~~~a~~~~PVilstG 138 (290)
+....++.+++ .+|++|+-....... .+-+++.++|+||++|..
T Consensus 114 ~pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~tGRpi~~sc~ 172 (404)
T 3hg3_A 114 FPGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRTGRSIVYSCE 172 (404)
T ss_dssp SBCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 22234555666 799999876544322 244667789999999854
No 131
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=93.25 E-value=1.6 Score=39.05 Aligned_cols=189 Identities=14% Similarity=0.127 Sum_probs=110.3
Q ss_pred hhHHhhhcCCCCeEEEEccCC-------ccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH
Q 022892 5 TALFNQLKAAEPFFLLAGPNV-------IESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK 77 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpcs-------ien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~ 77 (290)
.+++..+...+++.||||.=- |.......++|+...+ . +.++.- .|-+..|+| ++.
T Consensus 29 ~~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~----~-A~~IsV-------lTd~~~F~g-----s~~ 91 (251)
T 1i4n_A 29 HRFLEVLSGKERVKIIAEFKKASPSAGDINADASLEDFIRMYDE----L-ADAISI-------LTEKHYFKG-----DPA 91 (251)
T ss_dssp CHHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHH----H-CSEEEE-------ECCCSSSCC-----CTH
T ss_pred cCHHHHHhhCCCceEEEeecCCCCCCCccCCCCCHHHHHHHHHH----h-CCceEE-------EecccccCC-----CHH
Confidence 456677754455899998642 2111134566666554 3 544432 122222443 456
Q ss_pred HHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcceecccCCccCC---HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTD--VHETVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave 151 (290)
.|+++++..++|++.- +.|+.++..+.. .+|++-+=...+.. ..|++.+-++|+-+++... |.+|+..|++
T Consensus 92 dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~---~~eE~~~A~~ 168 (251)
T 1i4n_A 92 FVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVH---SREDLEKVFS 168 (251)
T ss_dssp HHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEEC---SHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHh
Confidence 6777777789999974 345666666555 58875444444433 2456666778999999987 8999888754
Q ss_pred HHHHc-CCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 022892 152 KVRLA-GNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 227 (290)
Q Consensus 152 ~i~~~-Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~ 227 (290)
. |. +++-++- .+|....+|+.....|.. . +.+|+.- +. + + . +.-+.
T Consensus 169 ----l~g~-~iIGinn---r~l~t~~~d~~~~~~l~~~ip~~~~vIaE-sG-I--------------~-t-----~edv~ 218 (251)
T 1i4n_A 169 ----VIRP-KIIGINT---RDLDTFEIKKNVLWELLPLVPDDTVVVAE-SG-I--------------K-D-----PRELK 218 (251)
T ss_dssp ----TCCC-SEEEEEC---BCTTTCCBCTTHHHHHGGGSCTTSEEEEE-SC-C--------------C-C-----GGGHH
T ss_pred ----cCCC-CEEEEeC---cccccCCCCHHHHHHHHHhCCCCCEEEEe-CC-C--------------C-C-----HHHHH
Confidence 3 54 4444432 135555678777777755 2 4555431 11 1 1 1 22234
Q ss_pred HHHHcCCCEEEEeeeCC
Q 022892 228 TAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 228 aAva~GA~G~~IEkH~t 244 (290)
.+..+ ++|+++=..++
T Consensus 219 ~~~~~-a~avLVG~aim 234 (251)
T 1i4n_A 219 DLRGK-VNAVLVGTSIM 234 (251)
T ss_dssp HHTTT-CSEEEECHHHH
T ss_pred HHHHh-CCEEEEcHHHc
Confidence 55677 99999987763
No 132
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=93.18 E-value=1.1 Score=42.42 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-eecCcccHHHHhh-hc
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGK-VA 107 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s-~~~d~~~~~~l~~-~~ 107 (290)
...+.++++++ +|+++|....-. +.. ...++.++.+++.. +++++. .+.+++.+..+.+ .+
T Consensus 100 ~~~e~~~~a~~----aGvdvI~id~a~-----------G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGa 163 (361)
T 3r2g_A 100 NELQRAEALRD----AGADFFCVDVAH-----------AHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGA 163 (361)
T ss_dssp HHHHHHHHHHH----TTCCEEEEECSC-----------CSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH----cCCCEEEEeCCC-----------CCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCC
Confidence 45566666665 699987653210 111 23345555555555 899999 8999999999888 69
Q ss_pred ceecccCC---c----------cCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 108 DIIQIPAF---L----------CRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 108 d~~kIgs~---~----------~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave 151 (290)
|+++||.. . ..+...+.++++.-.||+..-|.. +..++..|+.
T Consensus 164 D~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~-~~~di~kALa 219 (361)
T 3r2g_A 164 DIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIK-TSGDIVKALA 219 (361)
T ss_dssp SEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCC-SHHHHHHHHH
T ss_pred CEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCC-CHHHHHHHHH
Confidence 99998533 1 124556666665544999999998 9999988865
No 133
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.09 E-value=3.5 Score=43.66 Aligned_cols=173 Identities=10% Similarity=0.066 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHhc-CCcEEEee---cCcccHHHHhh-----hcceeccc-------------CCccCCHH----HHHHHH
Q 022892 74 EGLKILEKVKIAY-DIPIVTDV---HETVQCEEVGK-----VADIIQIP-------------AFLCRQTD----LLVAAA 127 (290)
Q Consensus 74 ~~l~~L~~~~~~~-Gi~~~s~~---~d~~~~~~l~~-----~~d~~kIg-------------s~~~~n~~----lL~~~a 127 (290)
...+.+.++.+.. +.+++..+ .+++....+.+ .+|++.|- +..+++.. +++++-
T Consensus 620 ~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~ 699 (1025)
T 1gte_A 620 YWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVR 699 (1025)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHH
Confidence 3444555655544 56777766 33444333322 46777662 22234544 444443
Q ss_pred -hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec---------------------CCC-CCCCC---CCCchh
Q 022892 128 -KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG---------------------TMF-GYNDL---IVDPRN 181 (290)
Q Consensus 128 -~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g---------------------s~~-~y~~~---~~dL~~ 181 (290)
.+++||++|-... .+++...++.+...|-.-|++.-.. +.. +|... .+.+..
T Consensus 700 ~~~~~Pv~vK~~~~--~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~ 777 (1025)
T 1gte_A 700 QAVQIPFFAKLTPN--VTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRA 777 (1025)
T ss_dssp HHCSSCEEEEECSC--SSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHH
T ss_pred HhhCCceEEEeCCC--hHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHH
Confidence 3589999998654 4456666666677787666663111 111 11111 011456
Q ss_pred HHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChH
Q 022892 182 LEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLR 259 (290)
Q Consensus 182 i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~ 259 (290)
+..+++ . ++||+.+..=. . ..-+..++++||++++|=+-+.- -.+.
T Consensus 778 v~~v~~~~~~ipvi~~GGI~--------------------s--~~da~~~l~~Ga~~v~vg~~~l~----------~~~~ 825 (1025)
T 1gte_A 778 VTTIARALPGFPILATGGID--------------------S--AESGLQFLHSGASVLQVCSAVQN----------QDFT 825 (1025)
T ss_dssp HHHHHHHSTTCCEEEESSCC--------------------S--HHHHHHHHHTTCSEEEESHHHHT----------SCTT
T ss_pred HHHHHHHcCCCCEEEecCcC--------------------C--HHHHHHHHHcCCCEEEEeecccc----------CCcc
Confidence 777777 6 89998743221 1 23455667899999999775421 1235
Q ss_pred HHHHHHHHHHHHHHHhCCccc
Q 022892 260 NLEELLEELVAIAKVSKGKQR 280 (290)
Q Consensus 260 ~l~~lv~~ir~~~~~lg~~~~ 280 (290)
.++++.+.++.+-...|-+.+
T Consensus 826 ~~~~~~~~l~~~l~~~G~~~i 846 (1025)
T 1gte_A 826 VIQDYCTGLKALLYLKSIEEL 846 (1025)
T ss_dssp HHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCCH
Confidence 778888888877776676433
No 134
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.04 E-value=0.68 Score=43.73 Aligned_cols=130 Identities=15% Similarity=0.066 Sum_probs=77.0
Q ss_pred CHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCCCCCCCCCCchhHHHHHh-cCCCEEEe
Q 022892 119 QTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMFGYNDLIVDPRNLEWMRE-ANCPVVAD 195 (290)
Q Consensus 119 n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D 195 (290)
+.+.++++. ..++||++| |.. +.++++.+. +.|-+-|.+- |.|..+ ..-..++..+..+++ .+.||+.|
T Consensus 213 ~~~~i~~i~~~~~~Pv~vk-gv~-t~e~a~~a~----~aGad~I~vs~~gg~~~--d~~~~~~~~l~~v~~~~~~pVia~ 284 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVK-GLL-SAEDADRCI----AEGADGVILSNHGGRQL--DCAISPMEVLAQSVAKTGKPVLID 284 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEE-EEC-CHHHHHHHH----HTTCSEEEECCGGGTSC--TTCCCGGGTHHHHHHHHCSCEEEC
T ss_pred cHHHHHHHHHhcCCCEEEE-ecC-cHHHHHHHH----HcCCCEEEEcCCCCCcC--CCCcCHHHHHHHHHHHcCCeEEEE
Confidence 567778765 479999999 555 888877654 4677666653 323221 111236778888888 77899885
Q ss_pred CCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 022892 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 275 (290)
Q Consensus 196 ~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~l 275 (290)
..=. .+ .. +..+.++||++++|=+-+.... ...+... --+.++.+++.++..-...
T Consensus 285 GGI~----------------~~-----~d-v~kal~~GAdaV~iGr~~l~~~-~~~g~~~-v~~~~~~l~~el~~~m~~~ 340 (380)
T 1p4c_A 285 SGFR----------------RG-----SD-IVKALALGAEAVLLGRATLYGL-AARGETG-VDEVLTLLKADIDRTLAQI 340 (380)
T ss_dssp SSCC----------------SH-----HH-HHHHHHTTCSCEEESHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----------------CH-----HH-HHHHHHhCCcHhhehHHHHHHH-HhcCHHH-HHHHHHHHHHHHHHHHHHh
Confidence 3322 12 23 4456789999999987663110 0000000 0024566677777777777
Q ss_pred CCccc
Q 022892 276 KGKQR 280 (290)
Q Consensus 276 g~~~~ 280 (290)
|.+.+
T Consensus 341 G~~~i 345 (380)
T 1p4c_A 341 GCPDI 345 (380)
T ss_dssp TCCBG
T ss_pred CCCCH
Confidence 76443
No 135
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.00 E-value=0.27 Score=44.98 Aligned_cols=71 Identities=8% Similarity=0.038 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
+..+++++++|++-.. .+.+.+ ++ .+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|.+.-++.
T Consensus 49 ~~a~~~a~~~g~~~~~-----~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 49 EAVRAAAGKLGWSTTE-----TDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAA 121 (390)
T ss_dssp HHHHHHHHHHTCSEEE-----SCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHH
Confidence 3456778899997432 234444 44 69999999999999999999999999999999999999998877444
No 136
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=92.95 E-value=0.22 Score=45.47 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
+..+++++++|++-.. .+.+. +++ .+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|.+..++..+
T Consensus 60 ~~a~~~a~~~g~~~~y-----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 60 TRAREMADRFSVPHAF-----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp HHHHHHHHHHTCSEEE-----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCeee-----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHH
Confidence 3456778899997432 23444 444 6999999999999999999999999999999999999999888887665
Q ss_pred HcC
Q 022892 155 LAG 157 (290)
Q Consensus 155 ~~G 157 (290)
+.|
T Consensus 135 ~~~ 137 (350)
T 4had_A 135 RNK 137 (350)
T ss_dssp HHT
T ss_pred HcC
Confidence 544
No 137
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.71 E-value=1.2 Score=42.10 Aligned_cols=115 Identities=12% Similarity=0.159 Sum_probs=75.4
Q ss_pred eEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-ee
Q 022892 17 FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT-DV 94 (290)
Q Consensus 17 ~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s-~~ 94 (290)
..+++..+. +. ...+.++.+++ .|+++|-...-. +.. ...++.++++.+.. ++|++. .+
T Consensus 142 ~~~~~~i~~--~~-~~~~~a~~~~~----~G~d~i~i~~~~-----------g~~-~~~~e~i~~ir~~~~~~pviv~~v 202 (404)
T 1eep_A 142 LRVGAAVSI--DI-DTIERVEELVK----AHVDILVIDSAH-----------GHS-TRIIELIKKIKTKYPNLDLIAGNI 202 (404)
T ss_dssp BCCEEEECS--CT-THHHHHHHHHH----TTCSEEEECCSC-----------CSS-HHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred ceEEEEeCC--Ch-hHHHHHHHHHH----CCCCEEEEeCCC-----------CCh-HHHHHHHHHHHHHCCCCeEEEcCC
Confidence 345666554 22 24566666554 699988652100 111 34455666666667 899995 88
Q ss_pred cCcccHHHHhh-hcceecccC-------------CccCCHHHHHHHH----hcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 95 HETVQCEEVGK-VADIIQIPA-------------FLCRQTDLLVAAA----KTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 95 ~d~~~~~~l~~-~~d~~kIgs-------------~~~~n~~lL~~~a----~~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+++.+..+.+ .+|++.+|. ....+...|..+. ..+.||+..-|.. +.+++..++.
T Consensus 203 ~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~-~~~d~~~ala 276 (404)
T 1eep_A 203 VTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIR-FSGDVVKAIA 276 (404)
T ss_dssp CSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCC-SHHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCC-CHHHHHHHHH
Confidence 99888888877 699999932 1122444455554 3689999999999 9999998765
No 138
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=92.68 E-value=0.56 Score=43.07 Aligned_cols=90 Identities=13% Similarity=0.054 Sum_probs=57.6
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CCC-------------CCC---CCCCchhHHHHHh-c--C
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MFG-------------YND---LIVDPRNLEWMRE-A--N 189 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~~~-------------y~~---~~~dL~~i~~lk~-~--~ 189 (290)
++||++|-....+.+|+...++.+...|-+-|++ +.++ ... +.. ....+..+..+++ . +
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~v-sn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ 289 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIA-TNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGR 289 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE-CCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEE-eCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCC
Confidence 7999999887778889988899888888654544 4332 110 000 0012355666777 5 7
Q ss_pred CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 190 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 190 ~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
+||+.+..=. . ..-+..++++||++++|=+-
T Consensus 290 ipVi~~GGI~-----------------~-----~~da~~~l~~GAd~V~igr~ 320 (336)
T 1f76_A 290 LPIIGVGGID-----------------S-----VIAAREKIAAGASLVQIYSG 320 (336)
T ss_dssp SCEEEESSCC-----------------S-----HHHHHHHHHHTCSEEEESHH
T ss_pred CCEEEECCCC-----------------C-----HHHHHHHHHCCCCEEEeeHH
Confidence 9998742211 1 34566778899998877544
No 139
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.63 E-value=2.9 Score=36.05 Aligned_cols=185 Identities=11% Similarity=0.058 Sum_probs=94.2
Q ss_pred EEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHH-hcCCcEEEeecC
Q 022892 18 FLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKI-AYDIPIVTDVHE 96 (290)
Q Consensus 18 ~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~-~~Gi~~~s~~~d 96 (290)
.++.-+-+. +.....+..+.+ .+.|++++-+..-+ ....+.+ .++ .+..+.+++.+. .+++.+++ .|
T Consensus 8 ~i~psi~a~-d~~~l~~~i~~~----~~~Gad~i~l~i~D--g~fv~~~--~~~-~~~~~~lr~~~~~~~~v~lmv--~d 75 (228)
T 1h1y_A 8 KIAPSMLSS-DFANLAAEADRM----VRLGADWLHMDIMD--GHFVPNL--TIG-APVIQSLRKHTKAYLDCHLMV--TN 75 (228)
T ss_dssp EEEEBGGGS-CGGGHHHHHHHH----HHTTCSEEEEEEEB--SSSSSCB--CBC-HHHHHHHHTTCCSEEEEEEES--SC
T ss_pred eEEEEeeeC-CHHHHHHHHHHH----HHcCCCEEEEEEec--CCcCcch--hhC-HHHHHHHHhhcCCcEEEEEEe--cC
Confidence 344444443 333333444443 45799886443211 1111111 122 244555555542 33444444 33
Q ss_pred c-ccHHHHhh-hcceecccCCccCC--HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc--CCCcEEEEeecCCC
Q 022892 97 T-VQCEEVGK-VADIIQIPAFLCRQ--TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA--GNPNVMVCERGTMF 170 (290)
Q Consensus 97 ~-~~~~~l~~-~~d~~kIgs~~~~n--~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~--Gn~~i~L~~~gs~~ 170 (290)
+ ..++.+.+ .+|.+++....... ...++++-+.|+.++++..+. |..|...+ +... +- +.+++-... .
T Consensus 76 ~~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~-t~~e~~~~---~~~~~~~~-d~vl~~sv~-p 149 (228)
T 1h1y_A 76 PSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPG-TPVEEVFP---LVEAENPV-ELVLVMTVE-P 149 (228)
T ss_dssp GGGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTT-SCGGGGHH---HHHSSSCC-SEEEEESSC-T
T ss_pred HHHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCC-CCHHHHHH---HHhcCCCC-CEEEEEeec-C
Confidence 3 23555555 69999887766532 456777777899999999776 55444332 2332 33 445442211 1
Q ss_pred CCCCCCC---CchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 171 GYNDLIV---DPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 171 ~y~~~~~---dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
++..... -+..+..+++ . ++||.+|.-=+ +.-+..++..||||+++=+-+
T Consensus 150 g~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~-----------------------~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 150 GFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLG-----------------------PSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp TCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCS-----------------------TTTHHHHHHHTCCEEEESHHH
T ss_pred CCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcC-----------------------HHHHHHHHHcCCCEEEECHHH
Confidence 1111112 2445666666 5 78988752211 011223455699999988776
No 140
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=92.42 E-value=1.1 Score=41.14 Aligned_cols=136 Identities=18% Similarity=0.065 Sum_probs=77.2
Q ss_pred HHHHHHHHhcCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecC--------CC------CC--CCCCCCchh
Q 022892 120 TDLLVAAAKTGKIINIK-KGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGT--------MF------GY--NDLIVDPRN 181 (290)
Q Consensus 120 ~~lL~~~a~~~~PVils-tG~~~tl~e~~~Ave~i~~~Gn~~i~L~-~~gs--------~~------~y--~~~~~dL~~ 181 (290)
.+.++++-+.++||++| .|...++++... +...|-+-|++- |-|+ .. +| ..-...+..
T Consensus 171 ~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~----~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 246 (332)
T 1vcf_A 171 VERLAELLPLPFPVMVKEVGHGLSREAALA----LRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARA 246 (332)
T ss_dssp HHHHHHHCSCSSCEEEECSSSCCCHHHHHH----HTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHH
T ss_pred HHHHHHHHcCCCCEEEEecCCCCCHHHHHH----HHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHH
Confidence 45666665578999999 666568887553 445676544442 2222 10 00 001123455
Q ss_pred HHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChH
Q 022892 182 LEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLR 259 (290)
Q Consensus 182 i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~ 259 (290)
+..+++ . ++||+.+..-.. ..-+..++++||++++|=+-+--.. .++.. --.+
T Consensus 247 l~~v~~~~~~ipvia~GGI~~----------------------~~d~~kal~~GAd~V~igr~~l~~~--~~G~~-gv~~ 301 (332)
T 1vcf_A 247 ILEVREVLPHLPLVASGGVYT----------------------GTDGAKALALGADLLAVARPLLRPA--LEGAE-RVAA 301 (332)
T ss_dssp HHHHHHHCSSSCEEEESSCCS----------------------HHHHHHHHHHTCSEEEECGGGHHHH--TTCHH-HHHH
T ss_pred HHHHHHhcCCCeEEEECCCCC----------------------HHHHHHHHHhCCChHhhhHHHHHHH--hccHH-HHHH
Confidence 666766 5 799988533221 2334467889999999987553110 11100 0013
Q ss_pred HHHHHHHHHHHHHHHhCCccccccC
Q 022892 260 NLEELLEELVAIAKVSKGKQRMNID 284 (290)
Q Consensus 260 ~l~~lv~~ir~~~~~lg~~~~~~~~ 284 (290)
-++.+.+.++..-...|.+++-++.
T Consensus 302 ~~~~l~~el~~~m~~~G~~~i~el~ 326 (332)
T 1vcf_A 302 WIGDYLEELRTALFAIGARNPKEAR 326 (332)
T ss_dssp HHHHHHHHHHHHHHHHTCSSGGGGT
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHh
Confidence 4667778888887788877665543
No 141
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.33 E-value=7.2 Score=36.39 Aligned_cols=131 Identities=18% Similarity=0.048 Sum_probs=75.1
Q ss_pred CHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEE
Q 022892 119 QTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 194 (290)
Q Consensus 119 n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~ 194 (290)
+.+.++++. .+++||++|--+ +.+++..+. ..|-+-|.+--.|+...+ ....++..+..+++ . ++||+.
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~--~~e~a~~a~----~~Gad~I~vs~~ggr~~~-~~~~~~~~l~~v~~~~~~~ipvia 285 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVI--TAEDARLAV----QHGAAGIIVSNHGARQLD-YVPATIMALEEVVKAAQGRIPVFL 285 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCC--SHHHHHHHH----HTTCSEEEECCGGGTSST-TCCCHHHHHHHHHHHTTTSSCEEE
T ss_pred hHHHHHHHHHHhCCCEEEEecC--CHHHHHHHH----HcCCCEEEECCCCCccCC-CcccHHHHHHHHHHHhCCCCEEEE
Confidence 445566654 479999997653 677776654 467665555332222111 11246677887877 5 799988
Q ss_pred eCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 195 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 195 D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
|..-.. ..-+..+.++||++++|=+-+-..-+ ..+.. --.+-++.+++.++..-..
T Consensus 286 ~GGI~~----------------------~~D~~k~l~~GAdaV~iGr~~l~~~~-~~G~~-gv~~~~~~l~~el~~~m~~ 341 (370)
T 1gox_A 286 DGGVRR----------------------GTDVFKALALGAAGVFIGRPVVFSLA-AEGEA-GVKKVLQMMRDEFELTMAL 341 (370)
T ss_dssp ESSCCS----------------------HHHHHHHHHHTCSEEEECHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCC----------------------HHHHHHHHHcCCCEEeecHHHHHHHh-hccHH-HHHHHHHHHHHHHHHHHHH
Confidence 644331 22344567899999999875521100 01100 0003466677777777777
Q ss_pred hCCccc
Q 022892 275 SKGKQR 280 (290)
Q Consensus 275 lg~~~~ 280 (290)
.|.+.+
T Consensus 342 ~G~~~i 347 (370)
T 1gox_A 342 SGCRSL 347 (370)
T ss_dssp HTCSBT
T ss_pred hCCCCH
Confidence 776443
No 142
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.32 E-value=1.2 Score=43.61 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=82.6
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC-CcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD-IPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G-i~~~s 92 (290)
..++.+.|+++.- . ..++.++.|++ +|+++|...+-. +. ....++.+++++++++ ++++.
T Consensus 242 ~~rl~V~aavg~~--~-d~~era~aLve----aGvd~I~Id~a~-----------g~-~~~v~~~i~~i~~~~~~~~vi~ 302 (511)
T 3usb_A 242 QGRLLVGAAVGVT--A-DAMTRIDALVK----ASVDAIVLDTAH-----------GH-SQGVIDKVKEVRAKYPSLNIIA 302 (511)
T ss_dssp TSCBCCEEEECSS--T-THHHHHHHHHH----TTCSEEEEECSC-----------TT-SHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccceeeeeeeeec--c-chHHHHHHHHh----hccceEEecccc-----------cc-hhhhhhHHHHHHHhCCCceEEe
Confidence 4567777777752 2 34777778877 599998775322 11 1345667778888875 77776
Q ss_pred -eecCcccHHHHhh-hcceecccCCc-------------cCCHHHHHHH----HhcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 93 -DVHETVQCEEVGK-VADIIQIPAFL-------------CRQTDLLVAA----AKTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 93 -~~~d~~~~~~l~~-~~d~~kIgs~~-------------~~n~~lL~~~----a~~~~PVilstG~~~tl~e~~~Ave 151 (290)
++.+.+.+..+.+ .+|++++|..- ..+...+..+ ...+.|||.+=|.. +..++..|+.
T Consensus 303 g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~-~~~di~kala 379 (511)
T 3usb_A 303 GNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIK-YSGDMVKALA 379 (511)
T ss_dssp EEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC-SHHHHHHHHH
T ss_pred eeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCC-CHHHHHHHHH
Confidence 8889988888887 79999984321 2345555443 33579999999999 9999998854
No 143
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=92.31 E-value=6.3 Score=35.70 Aligned_cols=175 Identities=9% Similarity=0.061 Sum_probs=99.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHh-cCCcEEEe-ecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIA-YDIPIVTD-VHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~-~Gi~~~s~-~~d~~~~~~l~~ 105 (290)
+.+.-++++++|.++ |++.|=..+ |..+ +..++.+++.++. .+..+.+= +-....++...+
T Consensus 25 ~~~~K~~i~~~L~~~----Gv~~IE~g~----p~~~---------~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~ 87 (293)
T 3ewb_X 25 DVKEKIQIALQLEKL----GIDVIEAGF----PISS---------PGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEE 87 (293)
T ss_dssp CHHHHHHHHHHHHHH----TCSEEEEEC----GGGC---------HHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCEEEEeC----CCCC---------ccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHH
Confidence 678899999999885 999875442 2222 2334444444433 23333321 122233443322
Q ss_pred -----hcceec--ccCCccCC---------------HHHHHHHHhcCCeEEEeCCCC--CCHHHHHHHHHHHHHcCCCcE
Q 022892 106 -----VADIIQ--IPAFLCRQ---------------TDLLVAAAKTGKIINIKKGQF--CASSVMVNSAEKVRLAGNPNV 161 (290)
Q Consensus 106 -----~~d~~k--Igs~~~~n---------------~~lL~~~a~~~~PVilstG~~--~tl~e~~~Ave~i~~~Gn~~i 161 (290)
.++.+- +++.+..+ .+.++++-+.+..|.++-..+ .+++.+...++.+...|-..|
T Consensus 88 ~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i 167 (293)
T 3ewb_X 88 ALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVI 167 (293)
T ss_dssp HHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 223222 23333221 133444556688887764321 388889999999999999888
Q ss_pred EEEeecCCCCCCCCCCCchhHHHHHh-cC----CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCE
Q 022892 162 MVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236 (290)
Q Consensus 162 ~L~~~gs~~~y~~~~~dL~~i~~lk~-~~----~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G 236 (290)
.|+..... ..|.. +- .-+..+++ +. +|+++ +.|-. +.+...-+.+|+.+||+
T Consensus 168 ~l~DT~G~-~~P~~-v~-~lv~~l~~~~~~~~~~~l~~-H~Hnd------------------~Gla~AN~laA~~aGa~- 224 (293)
T 3ewb_X 168 NIPDTVGY-TNPTE-FG-QLFQDLRREIKQFDDIIFAS-HCHDD------------------LGMATANALAAIENGAR- 224 (293)
T ss_dssp EEECSSSC-CCHHH-HH-HHHHHHHHHCTTGGGSEEEE-ECBCT------------------TSCHHHHHHHHHHTTCC-
T ss_pred EecCCCCC-CCHHH-HH-HHHHHHHHhcCCccCceEEE-EeCCC------------------cChHHHHHHHHHHhCCC-
Confidence 88776542 12221 11 34556666 53 67988 77763 22335567789999998
Q ss_pred EEEeeeC
Q 022892 237 VFMEVHD 243 (290)
Q Consensus 237 ~~IEkH~ 243 (290)
.++.-.
T Consensus 225 -~vd~sv 230 (293)
T 3ewb_X 225 -RVEGTI 230 (293)
T ss_dssp -EEEEBG
T ss_pred -EEEeec
Confidence 777655
No 144
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.28 E-value=2.6 Score=40.26 Aligned_cols=129 Identities=13% Similarity=0.036 Sum_probs=73.3
Q ss_pred CcEEEeecCcccHHHHhh-hcceecccCCccCC---HHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 022892 88 IPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 88 i~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~-~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~ 162 (290)
+....-+.+.+.++.+.+ .+|++-|.+..-.. .++++++.+. +.||+..+- .|.++.+.+. ..|-+-|.
T Consensus 137 v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V--~t~e~A~~a~----~aGAD~I~ 210 (400)
T 3ffs_A 137 VGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV--VTEEATKELI----ENGADGIK 210 (400)
T ss_dssp CEEEECCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE--CSHHHHHHHH----HTTCSEEE
T ss_pred EEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec--CCHHHHHHHH----HcCCCEEE
Confidence 444555556667777766 69999874433222 4666776554 899998543 3688777654 45765444
Q ss_pred EEe------ecCCCCCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 022892 163 VCE------RGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 232 (290)
Q Consensus 163 L~~------~gs~~~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~ 232 (290)
+ . |++........-++..+..+.+ .++||+.|..=. .+ .. ...|.++
T Consensus 211 v-G~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~----------------~~-----~d-i~kalal 267 (400)
T 3ffs_A 211 V-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIR----------------YS-----GD-IGKALAV 267 (400)
T ss_dssp E-CC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC----------------SH-----HH-HHHHHTT
T ss_pred E-eCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCC----------------CH-----HH-HHHHHHc
Confidence 4 2 2221000001124556666654 478998753211 01 23 3467889
Q ss_pred CCCEEEEeeeCCC
Q 022892 233 GVDGVFMEVHDDP 245 (290)
Q Consensus 233 GA~G~~IEkH~t~ 245 (290)
||+|++|=+-|.-
T Consensus 268 GAd~V~vGt~f~~ 280 (400)
T 3ffs_A 268 GASSVMIGSILAG 280 (400)
T ss_dssp TCSEEEECGGGTT
T ss_pred CCCEEEEChHHhc
Confidence 9999998876654
No 145
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=92.27 E-value=1.9 Score=39.35 Aligned_cols=109 Identities=12% Similarity=0.079 Sum_probs=76.5
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..|++..++-+..++-++||.-++..+++ .++.+.+++..+.+. .|.| .++.- |++|+...++.|.+
T Consensus 5 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~--------~G~p---D~~~v-t~~em~~~~~~I~~ 72 (290)
T 2hjp_A 5 QALRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSAS--------YAVP---DANIL-SMSTHLEMMRAIAS 72 (290)
T ss_dssp HHHHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHH--------TTSC---TTTCS-CHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHh--------CCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 34666667777888889999999999888 699999987654432 3555 34555 89999888877652
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
. .++||++|-+.+- |..+.+...++.-+..||.
T Consensus 73 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~v~~l~~aGa~ 105 (290)
T 2hjp_A 73 T-------------------------------VSIPLIADIDTGF----------------GNAVNVHYVVPQYEAAGAS 105 (290)
T ss_dssp T-------------------------------CSSCEEEECTTTT----------------SSHHHHHHHHHHHHHHTCS
T ss_pred c-------------------------------CCCCEEEECCCCC----------------CCHHHHHHHHHHHHHhCCe
Confidence 1 1468888888763 3233334445555678999
Q ss_pred EEEEeeeCC
Q 022892 236 GVFMEVHDD 244 (290)
Q Consensus 236 G~~IEkH~t 244 (290)
|+-||--..
T Consensus 106 gv~iED~~~ 114 (290)
T 2hjp_A 106 AIVMEDKTF 114 (290)
T ss_dssp EEEEECBCS
T ss_pred EEEEcCCCC
Confidence 999997643
No 146
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.18 E-value=0.94 Score=38.99 Aligned_cols=178 Identities=12% Similarity=0.056 Sum_probs=96.6
Q ss_pred eEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEEe--
Q 022892 17 FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVTD-- 93 (290)
Q Consensus 17 ~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s~-- 93 (290)
.+++|-=.. |.+..++.++++. .|++++... |.. + +..|+..++++.+.+ +.+++-+
T Consensus 8 ~lilalD~~--~~~~~~~~~~~~~-----~~vd~ie~g-~~~--------~----~~~G~~~i~~lr~~~~~~~i~ld~~ 67 (218)
T 3jr2_A 8 MIQIALDQT--NLTDAVAVASNVA-----SYVDVIEVG-TIL--------A----FAEGMKAVSTLRHNHPNHILVCDMK 67 (218)
T ss_dssp EEEEEECCS--SHHHHHHHHHHHG-----GGCSEEEEC-HHH--------H----HHHTTHHHHHHHHHCTTSEEEEEEE
T ss_pred CeEEEeCCC--CHHHHHHHHHHhc-----CCceEEEeC-cHH--------H----HhcCHHHHHHHHHhCCCCcEEEEEe
Confidence 345543333 6777777777742 378887654 221 0 235566666666653 6566543
Q ss_pred ecCc--ccHHHHhh-hcceecccCCccCC--HHHHHHHHhcCCeEEE-eCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec
Q 022892 94 VHET--VQCEEVGK-VADIIQIPAFLCRQ--TDLLVAAAKTGKIINI-KKGQFCASSVMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 94 ~~d~--~~~~~l~~-~~d~~kIgs~~~~n--~~lL~~~a~~~~PVil-stG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
.+|. ..++.+.+ .+|++-+....... ..+++.+.+.|+++++ --|.. |.+++..+.+ .|-..+.+ +.+
T Consensus 68 l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~-T~~~~~~~~~----~g~d~v~~-~~~ 141 (218)
T 3jr2_A 68 TTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNW-TMQDAKAWVD----LGITQAIY-HRS 141 (218)
T ss_dssp ECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSC-CHHHHHHHHH----TTCCEEEE-ECC
T ss_pred ecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecC-CHHHHHHHHH----cCccceee-eec
Confidence 2332 12334444 58888887665422 2455666677887765 44555 7777776543 36655544 333
Q ss_pred CCCCCCCCCCCchhHHHHHh---cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 168 TMFGYNDLIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 168 s~~~y~~~~~dL~~i~~lk~---~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+..+......-...+..+|+ .++||.++. |.+ +.-+..++++||+|+++=+-+
T Consensus 142 ~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~G--------------------GI~---~~~~~~~~~aGAd~vvvGsaI 197 (218)
T 3jr2_A 142 RDAELAGIGWTTDDLDKMRQLSALGIELSITG--------------------GIV---PEDIYLFEGIKTKTFIAGRAL 197 (218)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHTTCEEEEES--------------------SCC---GGGGGGGTTSCEEEEEESGGG
T ss_pred cccccCCCcCCHHHHHHHHHHhCCCCCEEEEC--------------------CCC---HHHHHHHHHcCCCEEEEchhh
Confidence 21111011122334555555 378887752 211 112335688899999987765
No 147
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=92.07 E-value=0.98 Score=42.51 Aligned_cols=130 Identities=17% Similarity=0.107 Sum_probs=73.7
Q ss_pred HHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEe
Q 022892 120 TDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVAD 195 (290)
Q Consensus 120 ~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D 195 (290)
.+.++++-+ +++||++|- .. +.++.+.+. ..|-+-|++--.|....+ ....++..++.+++ . ++||+.|
T Consensus 218 ~~~i~~lr~~~~~PvivK~-v~-~~e~a~~a~----~~Gad~I~vs~~ggr~~~-~g~~~~~~l~~v~~~v~~~ipVia~ 290 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKG-IQ-HPEDADMAI----KRGASGIWVSNHGARQLY-EAPGSFDTLPAIAERVNKRVPIVFD 290 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEE-EC-SHHHHHHHH----HTTCSEEEECCGGGTSCS-SCCCHHHHHHHHHHHHTTSSCEEEC
T ss_pred HHHHHHHHHHcCCCEEEEc-CC-CHHHHHHHH----HcCCCEEEEcCCCcCCCC-CCCChHHHHHHHHHHhCCCCeEEEE
Confidence 455677654 789999994 33 777766554 467655555433432111 11235677777876 4 6999886
Q ss_pred CCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 022892 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 275 (290)
Q Consensus 196 ~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~l 275 (290)
..=.. | .. +..++++||++++|=+-+--..+ ..+... -.+.++.+.++++..-...
T Consensus 291 GGI~~----------------g-----~D-~~kalalGAd~V~iGr~~l~~~~-~~G~~g-v~~~l~~l~~el~~~m~~~ 346 (368)
T 2nli_A 291 SGVRR----------------G-----EH-VAKALASGADVVALGRPVLFGLA-LGGWQG-AYSVLDYFQKDLTRVMQLT 346 (368)
T ss_dssp SSCCS----------------H-----HH-HHHHHHTTCSEEEECHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----------------H-----HH-HHHHHHcCCCEEEECHHHHHHHH-hcChHH-HHHHHHHHHHHHHHHHHHh
Confidence 44221 2 23 44568899999999874411000 001000 0124566677777777777
Q ss_pred CCccc
Q 022892 276 KGKQR 280 (290)
Q Consensus 276 g~~~~ 280 (290)
|.+.+
T Consensus 347 G~~~i 351 (368)
T 2nli_A 347 GSQNV 351 (368)
T ss_dssp TCSSH
T ss_pred CCcCH
Confidence 76443
No 148
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.06 E-value=1.7 Score=42.01 Aligned_cols=116 Identities=19% Similarity=0.222 Sum_probs=77.7
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEE-Ee
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIV-TD 93 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~-s~ 93 (290)
++.+.++.+. . ....+.++++++ +|+++|....- .|.. ...++.++++++.. ++|++ -.
T Consensus 225 ~l~vga~ig~--~-~~~~~~a~~l~~----aGvd~v~i~~~-----------~G~~-~~~~e~i~~i~~~~p~~pvi~g~ 285 (494)
T 1vrd_A 225 RLLVGAAVGT--S-PETMERVEKLVK----AGVDVIVIDTA-----------HGHS-RRVIETLEMIKADYPDLPVVAGN 285 (494)
T ss_dssp CBCCEEEECS--S-TTHHHHHHHHHH----TTCSEEEECCS-----------CCSS-HHHHHHHHHHHHHCTTSCEEEEE
T ss_pred hhccccccCc--C-HhHHHHHHHHHH----hCCCEEEEEec-----------CCch-HHHHHHHHHHHHHCCCceEEeCC
Confidence 4555555553 1 234666777766 69998876321 1111 35677778887777 78875 47
Q ss_pred ecCcccHHHHhh-hcceecccCCc-------------cCCHHHHHHHHh----cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 94 VHETVQCEEVGK-VADIIQIPAFL-------------CRQTDLLVAAAK----TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 94 ~~d~~~~~~l~~-~~d~~kIgs~~-------------~~n~~lL~~~a~----~~~PVilstG~~~tl~e~~~Ave 151 (290)
+.+.+.+..+.+ .+|++.++..- ..+...+..+++ .+.||+.+-|.. +..++..|+.
T Consensus 286 ~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~-~~~di~kala 360 (494)
T 1vrd_A 286 VATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIR-YSGDIVKALA 360 (494)
T ss_dssp ECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC-SHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcC-CHHHHHHHHH
Confidence 888888888877 79999995421 223444444433 489999999999 9999998764
No 149
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=91.97 E-value=0.58 Score=41.97 Aligned_cols=74 Identities=16% Similarity=0.043 Sum_probs=59.1
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
..+++++++|++. ..+.+.+.+.+|++-|....-...++...+.+.||+|++.+.++.+++|....++..++.|
T Consensus 44 ~~~~~a~~~~~~~------~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 44 KREKICSDYRIMP------FDSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp HHHHHHHHHTCCB------CSCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCC------cCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 3555677889875 2344555447999999999999999999999999999999999999999988887665554
No 150
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=91.91 E-value=7.2 Score=37.46 Aligned_cols=174 Identities=12% Similarity=0.087 Sum_probs=101.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc--EEE-eecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP--IVT-DVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~--~~s-~~~d~~~~~~l~ 104 (290)
+.+.-+++|++|.++ |++.|=-.+ |..+|. .+...++++ +.++. +++ -..+...++...
T Consensus 59 s~eeKl~Ia~~L~~~----Gv~~IEvG~----P~asp~---------d~~~~~~i~-~~~~~~~v~~~~r~~~~di~~A~ 120 (423)
T 3ivs_A 59 DTEKKIQIAKALDNF----GVDYIELTS----PVASEQ---------SRQDCEAIC-KLGLKCKILTHIRCHMDDARVAV 120 (423)
T ss_dssp CHHHHHHHHHHHHHH----TCSEEEECC----TTSCHH---------HHHHHHHHH-TSCCSSEEEEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCEEEEee----cccCHH---------HHHHHHHHH-hcCCCCEEEEeeccChhhHHHHH
Confidence 678899999999985 999876542 333322 122222222 23332 221 123444455554
Q ss_pred h-hcceeccc--CCccC-----C------H----HHHHHHHhcCCeEEEe--CCCCCCHHHHHHHHHHHHHcCCCcEEEE
Q 022892 105 K-VADIIQIP--AFLCR-----Q------T----DLLVAAAKTGKIINIK--KGQFCASSVMVNSAEKVRLAGNPNVMVC 164 (290)
Q Consensus 105 ~-~~d~~kIg--s~~~~-----n------~----~lL~~~a~~~~PVils--tG~~~tl~e~~~Ave~i~~~Gn~~i~L~ 164 (290)
+ .++.+-|- +.+.. | . +.++++-+.|..|.++ .+...+++.+...++.+...|...|.|+
T Consensus 121 ~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 121 ETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp HTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccC
Confidence 4 45544432 22210 0 1 2345556678888875 3333478888888888888998888888
Q ss_pred eecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 165 ERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 165 ~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
..... ..|.. + ..-+..+++ .++++.+ +.|-. +.+...-+.+|+.+||+ .++.-+
T Consensus 201 DTvG~-~~P~~-v-~~lv~~l~~~~~~~i~~-H~Hnd------------------~GlAvAN~laAv~aGa~--~vd~ti 256 (423)
T 3ivs_A 201 DTVGC-ATPRQ-V-YDLIRTLRGVVSCDIEC-HFHND------------------TGMAIANAYCALEAGAT--HIDTSI 256 (423)
T ss_dssp ETTSC-CCHHH-H-HHHHHHHHHHCSSEEEE-EEBCT------------------TSCHHHHHHHHHHTTCC--EEEEBG
T ss_pred CccCc-CCHHH-H-HHHHHHHHhhcCCeEEE-EECCC------------------CchHHHHHHHHHHhCCC--EEEEec
Confidence 76652 12221 1 134556666 7888988 67753 22335567789999998 777765
No 151
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=91.81 E-value=3.2 Score=47.39 Aligned_cols=193 Identities=12% Similarity=-0.002 Sum_probs=107.8
Q ss_pred hhhHHhhhcCCCCeEEEEccC-CccCHHHHHHHHHHHHHHHHHcCCCEEe-ccccccCCCCCcccCCCCChhHHHHHHHH
Q 022892 4 STALFNQLKAAEPFFLLAGPN-VIESEEHIMRMAKHIKSISTKVGLPLVF-KSSFDKANRTSSKSFRGPGMVEGLKILEK 81 (290)
Q Consensus 4 ~~~~~~~i~~~~~~~iIAgpc-sien~~~~le~Ak~L~~~a~~~G~~~V~-~~~~~k~~rts~~~~~g~~~~~~l~~L~~ 81 (290)
+|.+-+.++ ..++|.|+.. .+-+. + |+.+..++|.-.+. -..+. ..+..-+++++
T Consensus 573 ~t~~t~~lg--~~PIi~a~M~~~vs~~----~----LaaAva~aGglG~i~g~g~~-------------~~e~l~~~i~~ 629 (2060)
T 2uva_G 573 DTKMSRLLG--VPPVMVAGMTPTTVPW----D----FVAATMNAGYHIELAGGGYY-------------NAQKMSDAISK 629 (2060)
T ss_dssp ECHHHHHHT--SCSEEECCCTTTTCSH----H----HHHHHHHTTCEECEEGGGCC-------------SHHHHHHHHHH
T ss_pred chhhhhccc--cceEEecCCCCccccH----H----HHHHHHHCCCEEEECcCCCC-------------CHHHHHHHHHH
Confidence 456666666 4557777766 22122 2 33444456865544 22111 11222334555
Q ss_pred HHHhc--CCcEEEeecC--cc-------cHHHHhh-hcce--ecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 022892 82 VKIAY--DIPIVTDVHE--TV-------QCEEVGK-VADI--IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 82 ~~~~~--Gi~~~s~~~d--~~-------~~~~l~~-~~d~--~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~ 147 (290)
+.+.. |-+|...++- +. .++.+.+ .+++ +.++++.-..-++.+.+...+.+++...+ +..+..
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~~v~---~~~~a~ 706 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKP---GSVDAI 706 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEEECC---CSHHHH
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEEecC---CHHHHH
Confidence 55544 4566655443 33 2344444 5777 77777765544566777778999885544 457777
Q ss_pred HHHHHHHHcCCCcEEEEeecCC--CCC-CCCCC---CchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 148 NSAEKVRLAGNPNVMVCERGTM--FGY-NDLIV---DPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 148 ~Ave~i~~~Gn~~i~L~~~gs~--~~y-~~~~~---dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
.++..+...|-+-+++++.... -+. ..+++ -+..++.+++ .++||+.+..=. .
T Consensus 707 ~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~----------------~---- 766 (2060)
T 2uva_G 707 QQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG----------------G---- 766 (2060)
T ss_dssp HHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC----------------S----
T ss_pred HHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC----------------C----
Confidence 7777777888766665554331 111 11211 1345566676 688998842222 1
Q ss_pred cHHHHHHHHH-----------HcCCCEEEEeeeCC
Q 022892 221 LIPCIARTAI-----------AVGVDGVFMEVHDD 244 (290)
Q Consensus 221 ~~~~~a~aAv-----------a~GA~G~~IEkH~t 244 (290)
..-..++. ++||+|+++=+-|-
T Consensus 767 --g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~ 799 (2060)
T 2uva_G 767 --SEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMM 799 (2060)
T ss_dssp --HHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGG
T ss_pred --HHHHHHHhcCcchhhcCCCCCCCCEEEEchhhh
Confidence 23344678 89999999877653
No 152
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=91.79 E-value=0.49 Score=44.35 Aligned_cols=76 Identities=18% Similarity=0.150 Sum_probs=61.8
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
...+++++++|++-.. .+.+. +++ .+|++-|.+-.-.+.++..++.+.||+|++.+.++.|++|....++..+
T Consensus 70 ~~a~~~a~~~~~~~~y-----~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~ 144 (412)
T 4gqa_A 70 AMAERHAAKLGAEKAY-----GDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAAR 144 (412)
T ss_dssp HHHHHHHHHHTCSEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEE-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHH
Confidence 3466778899997332 23344 444 6999999999999999999999999999999999999999999988776
Q ss_pred HcC
Q 022892 155 LAG 157 (290)
Q Consensus 155 ~~G 157 (290)
+.|
T Consensus 145 ~~g 147 (412)
T 4gqa_A 145 RAG 147 (412)
T ss_dssp HHT
T ss_pred HhC
Confidence 654
No 153
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.79 E-value=2.7 Score=38.05 Aligned_cols=135 Identities=10% Similarity=0.056 Sum_probs=83.3
Q ss_pred hhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHH-HHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHH
Q 022892 5 TALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKS-ISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVK 83 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~-~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~ 83 (290)
..++..|.. ..+.++=--..+.|-+....+|+--.+ + .|-+.||..-... +|+.. .. ....-...+..
T Consensus 63 ~~~~~~i~~-~~~~~lpNTag~~ta~eAv~~a~lare~~---~~~~~iKlEv~~d-~~~ll-----pD-~~~tv~aa~~L 131 (265)
T 1wv2_A 63 PNLLDVIPP-DRYTILPNTAGCYDAVEAVRTCRLARELL---DGHNLVKLEVLAD-QKTLF-----PN-VVETLKAAEQL 131 (265)
T ss_dssp -------CT-TTSEEEEECTTCCSHHHHHHHHHHHHTTT---TSCCEEEECCBSC-TTTCC-----BC-HHHHHHHHHHH
T ss_pred chHHhhhhh-cCCEECCcCCCCCCHHHHHHHHHHHHHHc---CCCCeEEEEeecC-ccccC-----cC-HHHHHHHHHHH
Confidence 356666642 234444322334577777777766555 3 5688998876642 33221 11 12222233333
Q ss_pred HhcCCcEE-EeecCcccHHHHhh-hccee-----cccCC-ccCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 84 IAYDIPIV-TDVHETVQCEEVGK-VADII-----QIPAF-LCRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 84 ~~~Gi~~~-s~~~d~~~~~~l~~-~~d~~-----kIgs~-~~~n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+-|+.++ -..-|+.....+++ .++++ .||++ -+.|.++|+.+.+ .+.|||..=|.. |++++..|.+
T Consensus 132 ~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~-TPsDAa~Ame 207 (265)
T 1wv2_A 132 VKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVG-TASDAAIAME 207 (265)
T ss_dssp HTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-SHHHHHHHHH
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCC-CHHHHHHHHH
Confidence 45599999 48888888888887 46655 25665 4578999999866 588999999998 9999999877
No 154
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=91.62 E-value=6.6 Score=34.45 Aligned_cols=178 Identities=16% Similarity=0.180 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCccc---------H
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQ---------C 100 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~---------~ 100 (290)
....++++.+.......+++.++.. .+..|..+.+..++++..-=.|+.+ +
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis~ 81 (225)
T 1hg3_A 22 KRALEIAKAAEKVYKETGVTIVVAP--------------------QLVDLRMIAESVEIPVFAQHIDPIKPGSHTGHVLP 81 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEC--------------------CHHHHHHHHHSCSSCBEESCCCSCCSBSCTTCCCH
T ss_pred HHHHHHHHHHHhhccccCCcEEEeC--------------------CHHHHHHHHHhcCCceeeeeCCcccCCCccCcccH
Confidence 6678888888664333234433332 2445555566669999997788888 9
Q ss_pred HHHhh-hcceecccCCc--cCCH---HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC-
Q 022892 101 EEVGK-VADIIQIPAFL--CRQT---DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN- 173 (290)
Q Consensus 101 ~~l~~-~~d~~kIgs~~--~~n~---~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~- 173 (290)
..+.+ .++++-||-.+ ...- .+++.+-+.|+-+++.-| +..|...+ ... ++.++-++-.-.-+..
T Consensus 82 ~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg---e~~e~~~~----~~~-~~~iIayep~waiGtG~ 153 (225)
T 1hg3_A 82 EAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN---NPAVSAAV----AAL-NPDYVAVEPPELIGTGI 153 (225)
T ss_dssp HHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES---SHHHHHHH----HTT-CCSEEEECCTTTTTTSC
T ss_pred HHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH----hcC-CCCEEEEeChhhhccCC
Confidence 99988 69999999987 4322 344556678999999999 44454333 222 2356666543211111
Q ss_pred ---CCCCC-chhHHH-HHh--cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCC
Q 022892 174 ---DLIVD-PRNLEW-MRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPL 246 (290)
Q Consensus 174 ---~~~~d-L~~i~~-lk~--~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~d 246 (290)
+.+.+ +..... +++ .+++|++-++-. . ..........|+||++|=.-
T Consensus 154 ~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~-----------------~-----~n~~~~~~~~~vDG~LVG~a---- 207 (225)
T 1hg3_A 154 PVSKAKPEVITNTVELVKKVNPEVKVLCGAGIS-----------------T-----GEDVKKAIELGTVGVLLASG---- 207 (225)
T ss_dssp CTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCC-----------------S-----HHHHHHHHHTTCSEEEESHH----
T ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCC-----------------c-----HHHHHHHHhCCCCEEEeCHH----
Confidence 22333 333333 344 256777744433 1 23344456779999988543
Q ss_pred CCCCCCCCCCChHHHHHHHHHHH
Q 022892 247 NAPVDGPTQWPLRNLEELLEELV 269 (290)
Q Consensus 247 ka~~D~~~sl~p~~l~~lv~~ir 269 (290)
+|.+++|.++++++.
T Consensus 208 --------~l~a~~~~~~i~~l~ 222 (225)
T 1hg3_A 208 --------VTKAKDPEKAIWDLV 222 (225)
T ss_dssp --------HHTCSSHHHHHHHHH
T ss_pred --------HHCCcCHHHHHHHHH
Confidence 566667777776654
No 155
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=91.61 E-value=3.1 Score=40.31 Aligned_cols=157 Identities=11% Similarity=0.027 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHH----HHHHHH---h--cCCcEEEeecCcc
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKI----LEKVKI---A--YDIPIVTDVHETV 98 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~----L~~~~~---~--~Gi~~~s~~~d~~ 98 (290)
+.+.+++.|+++++. ||+++=-.... |.|++ .....++.++. ++.+.+ + .++++.-+-++++
T Consensus 210 ~~~~al~~A~~mv~~----GAdIIDIGgeS----TrPGa-~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~ 280 (442)
T 3mcm_A 210 DDNQRKLNLDELIQS----GAEIIDIGAES----TKPDA-KPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLE 280 (442)
T ss_dssp CCCHHHHHHHHHHHH----TCSEEEEECCC----CCC-----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHH
T ss_pred CHHHHHHHHHHHHHC----CCCEEEECCCC----CCCCC-CCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHH
Confidence 456789999999885 99988765433 22331 11222344444 344444 3 3899999999999
Q ss_pred cHHHHhh---hcce-e-cccCCccCCHHHHHHHHhcCCeEEEeCCCC--CC-------------HHHHHHHHHHHHHcCC
Q 022892 99 QCEEVGK---VADI-I-QIPAFLCRQTDLLVAAAKTGKIINIKKGQF--CA-------------SSVMVNSAEKVRLAGN 158 (290)
Q Consensus 99 ~~~~l~~---~~d~-~-kIgs~~~~n~~lL~~~a~~~~PVilstG~~--~t-------------l~e~~~Ave~i~~~Gn 158 (290)
.++...+ .+++ + -|.+ .....++..+++.+.||++-.-.. .| .+...+.++.+.+.|-
T Consensus 281 VaeaAL~~~aGa~i~INDVsg--~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI 358 (442)
T 3mcm_A 281 VMQKILAKHHDIIWMINDVEC--NNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGI 358 (442)
T ss_dssp HHHHHHHHHGGGCCEEEECCC--TTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhCCCCCEEEEcCCC--CCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCC
Confidence 9988665 4665 3 3443 244578888999999999954222 11 3344556677788885
Q ss_pred C-cEEEEeecCCCCCCC--CCCCchhHHHHHh-cCCCEEEe
Q 022892 159 P-NVMVCERGTMFGYND--LIVDPRNLEWMRE-ANCPVVAD 195 (290)
Q Consensus 159 ~-~i~L~~~gs~~~y~~--~~~dL~~i~~lk~-~~~pV~~D 195 (290)
+ +=+++..|.-|+-.. +--=|+.+..+++ +|+||.+-
T Consensus 359 ~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~lg~PvLvG 399 (442)
T 3mcm_A 359 AQQNIYFDIGFGFGKKSDTARYLLENIIEIKRRLELKALVG 399 (442)
T ss_dssp CGGGEEEECCCC------------CCHHHHHHHHTSEEEEC
T ss_pred CHHHEEEeCCCCCCCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 3 346678876553111 1112467777877 89998763
No 156
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=91.52 E-value=0.73 Score=41.87 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=60.0
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
...+++++++|++-.. .+.+.+ .+ .+|++-|+.-.-.+.++..++.+.||+|++.+.++.+++|....++..+
T Consensus 40 ~~a~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~ 114 (334)
T 3ohs_X 40 SRAKEFAQKHDIPKAY-----GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEAR 114 (334)
T ss_dssp HHHHHHHHHHTCSCEE-----SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 3456677888986322 234444 43 6999999999999999999999999999999999999999998888666
Q ss_pred HcC
Q 022892 155 LAG 157 (290)
Q Consensus 155 ~~G 157 (290)
+.|
T Consensus 115 ~~~ 117 (334)
T 3ohs_X 115 SRG 117 (334)
T ss_dssp HTT
T ss_pred HhC
Confidence 543
No 157
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=91.35 E-value=0.71 Score=42.51 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=60.1
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|++..+ +.+.+ .+ .+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 65 ~~~~~a~~~g~~~~~------~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~ 138 (350)
T 3rc1_A 65 RAKRFTERFGGEPVE------GYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARE 138 (350)
T ss_dssp HHHHHHHHHCSEEEE------SHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcC------CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 355677788998752 34444 34 69999999999999999999999999999999999999999998887666
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 139 ~g 140 (350)
T 3rc1_A 139 RG 140 (350)
T ss_dssp TT
T ss_pred hC
Confidence 54
No 158
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.19 E-value=0.57 Score=43.39 Aligned_cols=111 Identities=13% Similarity=0.070 Sum_probs=66.9
Q ss_pred cCCCEEec--cccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec----------CcccHHHHh-------h-
Q 022892 46 VGLPLVFK--SSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH----------ETVQCEEVG-------K- 105 (290)
Q Consensus 46 ~G~~~V~~--~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~----------d~~~~~~l~-------~- 105 (290)
+|+|+|+. ..|-- +++.. ..-+.+..+.+-|+++|+|++.++| ++.+.+.+. +
T Consensus 140 lGADaV~~l~~i~~G----s~~e~---~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 140 RGVDFAKTLVRINLS----DAGTA---PTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp HTCCEEEEEEEECTT----CTTHH---HHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCC----ChhHH---HHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 59999883 33321 11110 0124566677888999999999842 122333332 2
Q ss_pred hcc----eecccCCccCCHHHHHHHHhcCCeEEEeCCCCC-CHHHHHHHHHHHHH-cCCCcEEEEeecC
Q 022892 106 VAD----IIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-ASSVMVNSAEKVRL-AGNPNVMVCERGT 168 (290)
Q Consensus 106 ~~d----~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~-tl~e~~~Ave~i~~-~Gn~~i~L~~~gs 168 (290)
..| |+|++-- .. |-+-++....||++.-|... +.+|.++-++.... .|. .=+.+=|..
T Consensus 213 GADs~~tivK~~y~--e~--f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa-~Gv~vGRNI 276 (307)
T 3fok_A 213 GNDSSYTWMKLPVV--EE--MERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGV-RGLTVGRTL 276 (307)
T ss_dssp SSCCSSEEEEEECC--TT--HHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTE-EEEEECTTT
T ss_pred CCCcCCCEEEeCCc--HH--HHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCC-eEEeechhh
Confidence 378 9999655 22 33335667899999988874 56788887776666 454 234444544
No 159
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.09 E-value=1 Score=44.31 Aligned_cols=129 Identities=17% Similarity=0.065 Sum_probs=71.7
Q ss_pred HHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCCCCCCCCCCchhHHHHHh-c-------C
Q 022892 120 TDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMFGYNDLIVDPRNLEWMRE-A-------N 189 (290)
Q Consensus 120 ~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-~~gs~~~y~~~~~dL~~i~~lk~-~-------~ 189 (290)
...++++-+ +++||++| |.. +.++...+ ...|-+-|++- |.|+.. ......+..++.+++ . +
T Consensus 332 ~~~i~~lr~~~~~PvivK-gv~-~~e~A~~a----~~aGad~I~vs~hgG~~~--d~~~~~~~~l~~v~~~v~~~~~~~~ 403 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIK-GVQ-RTEDVIKA----AEIGVSGVVLSNHGGRQL--DFSRAPIEVLAETMPILEQRNLKDK 403 (511)
T ss_dssp HHHHHHHHHHCSSCEEEE-EEC-SHHHHHHH----HHTTCSEEEECCTTTTSS--TTCCCHHHHHHHHHHHHHTTTCBTT
T ss_pred HHHHHHHHHHhCCcEEEE-eCC-CHHHHHHH----HHcCCCEEEEcCCCCccC--CCCCchHHHHHHHHHHHHhhccCCC
Confidence 455677644 69999999 433 56665443 45676555553 333221 111124566777665 4 6
Q ss_pred CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022892 190 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 269 (290)
Q Consensus 190 ~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir 269 (290)
+||+.|..=. .| .. +..|+++||++++|=+-+--... ..+... -.+-++.+.+.++
T Consensus 404 ipVia~GGI~----------------~g-----~D-v~kaLalGAdaV~iGr~~l~~~~-~~G~~g-v~~~l~~l~~el~ 459 (511)
T 1kbi_A 404 LEVFVDGGVR----------------RG-----TD-VLKALCLGAKGVGLGRPFLYANS-CYGRNG-VEKAIEILRDEIE 459 (511)
T ss_dssp BEEEEESSCC----------------SH-----HH-HHHHHHHTCSEEEECHHHHHHHH-HHHHHH-HHHHHHHHHHHHH
T ss_pred cEEEEECCCC----------------CH-----HH-HHHHHHcCCCEEEECHHHHHHHH-hcChHH-HHHHHHHHHHHHH
Confidence 8998864322 12 33 44578899999999875421000 000000 0124566777777
Q ss_pred HHHHHhCCccc
Q 022892 270 AIAKVSKGKQR 280 (290)
Q Consensus 270 ~~~~~lg~~~~ 280 (290)
..-...|.+.+
T Consensus 460 ~~m~~~G~~~i 470 (511)
T 1kbi_A 460 MSMRLLGVTSI 470 (511)
T ss_dssp HHHHHHTCCBG
T ss_pred HHHHHhCCCcH
Confidence 77777786544
No 160
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.05 E-value=0.71 Score=43.18 Aligned_cols=96 Identities=10% Similarity=-0.040 Sum_probs=53.0
Q ss_pred HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC-----CCCCchhHHHHHh----cC
Q 022892 121 DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND-----LIVDPRNLEWMRE----AN 189 (290)
Q Consensus 121 ~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~-----~~~dL~~i~~lk~----~~ 189 (290)
+.++++-+. +.||++++.+ |.++.+.+++ .|-+-|.+-..+++..... ..-.+.+++.+.+ .+
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~--t~e~A~~a~~----aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ 223 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVV--TGEMVEELIL----SGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLK 223 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEEC--SHHHHHHHHH----TTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEeCC--CHHHHHHHHH----hCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcC
Confidence 345555333 7899998764 5888776654 6765444421111100000 0012334444432 47
Q ss_pred CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 190 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 190 ~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
+||+.|.-=. .| .. ...|.++||++++|=+-|.
T Consensus 224 ipvIa~GGI~----------------~g-----~d-i~kAlalGA~~V~vG~~fl 256 (351)
T 2c6q_A 224 GHIISDGGCS----------------CP-----GD-VAKAFGAGADFVMLGGMLA 256 (351)
T ss_dssp CEEEEESCCC----------------SH-----HH-HHHHHHTTCSEEEESTTTT
T ss_pred CcEEEeCCCC----------------CH-----HH-HHHHHHcCCCceeccHHHh
Confidence 9998852211 12 23 4468999999999998885
No 161
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=91.02 E-value=0.76 Score=43.00 Aligned_cols=77 Identities=9% Similarity=-0.090 Sum_probs=59.8
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhh-------hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGK-------VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 150 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-------~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Av 150 (290)
..+++++++|++-. .. ..+.+.+.+ .+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|....+
T Consensus 53 ~a~~~a~~~g~~~~-~~--~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~ 129 (398)
T 3dty_A 53 RGSAFGEQLGVDSE-RC--YADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLR 129 (398)
T ss_dssp HHHHHHHHTTCCGG-GB--CSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHH
T ss_pred HHHHHHHHhCCCcc-ee--eCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHH
Confidence 45667788998510 01 123444432 399999999999999999999999999999999999999999998
Q ss_pred HHHHHcC
Q 022892 151 EKVRLAG 157 (290)
Q Consensus 151 e~i~~~G 157 (290)
+..++.|
T Consensus 130 ~~a~~~g 136 (398)
T 3dty_A 130 ELSHKHN 136 (398)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8777654
No 162
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.94 E-value=1.9 Score=38.71 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..|++..++-+..++-++||..++..+++ .+|++.+|+..+.+ ..|.| .++.- |++|+...++.|.+
T Consensus 10 ~~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~--------~~G~p---D~~~v-t~~em~~~~~~I~r 77 (255)
T 2qiw_A 10 TKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD--------ATGSS---DGENM-NFADYMAVVKKITS 77 (255)
T ss_dssp HHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHH--------HTTCC---TTTCS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHH--------hCCCC---CCCCc-CHHHHHHHHHHHHh
Confidence 34666666666777789999999999988 69999999865443 14666 45555 99999999988765
Q ss_pred c
Q 022892 156 A 156 (290)
Q Consensus 156 ~ 156 (290)
.
T Consensus 78 ~ 78 (255)
T 2qiw_A 78 A 78 (255)
T ss_dssp H
T ss_pred c
Confidence 3
No 163
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=90.93 E-value=0.82 Score=44.98 Aligned_cols=105 Identities=10% Similarity=0.093 Sum_probs=66.0
Q ss_pred CHHHHHHHHhcCC-eEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCC
Q 022892 119 QTDLLVAAAKTGK-IINIKK-----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCP 191 (290)
Q Consensus 119 n~~lL~~~a~~~~-PVilst-----G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~p 191 (290)
+...++.+--.|. ||.+.. ....+++.++++++.. |...+.++.-+++|.+|...-|++.|..+-. +++|
T Consensus 172 HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIp 248 (501)
T 3hl2_A 172 QKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIP 248 (501)
T ss_dssp CHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCe
Confidence 3445555443333 666655 2334788888887643 4345555554444323434458999988876 8999
Q ss_pred EEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 192 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 192 V~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+++|--|+.+ -.........|..+| ||.++.=.|=
T Consensus 249 llVDeAhGah-----------------~~~~~~lp~sA~~~GrAD~vVqS~HK 284 (501)
T 3hl2_A 249 HIVNNAYGVQ-----------------SSKCMHLIQQGARVGRIDAFVQSLDK 284 (501)
T ss_dssp EEEECTTCTT-----------------CHHHHHHHHHHHHHSCCCEEEEEHHH
T ss_pred EEEeCcchhh-----------------hhhhhhhHHHHHhcCCCcEEEecccc
Confidence 9999989742 122345667788899 9976655553
No 164
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=90.91 E-value=0.94 Score=41.91 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|++-+. .+.+.+ ++ .+|++-|.+..-.+.++..++.+.||+|++.+.++.+++|....++..++
T Consensus 58 ~a~~~a~~~~~~~~~-----~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 58 KVEALAKRFNIARWT-----TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp HHHHHHHHTTCCCEE-----SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 456777889996222 234444 44 59999999999999999999999999999999999999999888876665
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 133 ~~ 134 (383)
T 3oqb_A 133 KG 134 (383)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 165
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=90.87 E-value=14 Score=36.73 Aligned_cols=112 Identities=14% Similarity=0.116 Sum_probs=73.6
Q ss_pred CCeEEEEccCCc----------c-CHHHHHHHHHHHHHHHHHcC-----CCEEeccccccCCCCCcccCCCCChhHHHHH
Q 022892 15 EPFFLLAGPNVI----------E-SEEHIMRMAKHIKSISTKVG-----LPLVFKSSFDKANRTSSKSFRGPGMVEGLKI 78 (290)
Q Consensus 15 ~~~~iIAgpcsi----------e-n~~~~le~Ak~L~~~a~~~G-----~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~ 78 (290)
.++.|++-.++- - +.+.+++.|+++++. | |++|=-.... |.|++- ....++.++.
T Consensus 223 ~~~~iMGIlNvTPDSFsDGG~~~~~~~~al~~a~~mv~~----G~~~~~AdIIDIGgeS----TRPGa~-~vs~eEEl~R 293 (545)
T 2bmb_A 223 SPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKD----ALYLHESVIIDVGGCS----TRPNSI-QASEEEEIRR 293 (545)
T ss_dssp SCCEEEEEEECSCSSTTTTTTTTTCHHHHHHHHHHHHHH----HHTTCSCEEEEEECSC----CSTTCC-CCCHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCcCCCcCcCCHHHHHHHHHHHHHc----CCCCCCceEEEECCCC----CCCCCC-CCCHHHHHHH
Confidence 456777655541 1 678899999999986 8 9987666433 233321 1222344433
Q ss_pred ----HHHHHH-----hcCCcEEEeecCcccHHHHhh-hcceec-ccCCccCCHHHHHHHHhc-CCeEEEe
Q 022892 79 ----LEKVKI-----AYDIPIVTDVHETVQCEEVGK-VADIIQ-IPAFLCRQTDLLVAAAKT-GKIINIK 136 (290)
Q Consensus 79 ----L~~~~~-----~~Gi~~~s~~~d~~~~~~l~~-~~d~~k-Igs~~~~n~~lL~~~a~~-~~PVils 136 (290)
++.+.+ ..++++..+-+.++.++...+ .++++- |.+.. ....++..+++. +.|+++.
T Consensus 294 vvpvI~~i~~~~~~~~~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~-~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 294 SIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGL-FDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp HHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHHHHHTTCCEEEETTTTS-SCTTHHHHHHTCTTSEEEEE
T ss_pred HHHHHHHHHhhccccCCCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCc-CChHHHHHHHHhCCCeEEEE
Confidence 444433 148999999999998888766 688773 54443 234678889999 9999996
No 166
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=90.83 E-value=0.86 Score=41.42 Aligned_cols=172 Identities=17% Similarity=0.117 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHcCCCEE-eccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC--cccHHHHhh-hcc
Q 022892 33 MRMAKHIKSISTKVGLPLV-FKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE--TVQCEEVGK-VAD 108 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V-~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d--~~~~~~l~~-~~d 108 (290)
.++|+.+.+ .|+++| ...-. |.-. ..+.|.......+.++++++..++|++.-.+. .+.++.+.+ .+|
T Consensus 31 ~~~a~~~~~----~Ga~~I~~l~p~---~~~~-~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd 102 (305)
T 2nv1_A 31 AEQAKIAEE----AGAVAVMALERV---PADI-RAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVD 102 (305)
T ss_dssp HHHHHHHHH----TTCSEEEECCC-----------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCS
T ss_pred HHHHHHHHH----cCCCEEEEcCCC---cchh-hhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCC
Confidence 456666655 699998 33200 1100 01222111233567777888899999876554 455566555 588
Q ss_pred eecccCCccCCHHHHHH--HHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe--------------e------
Q 022892 109 IIQIPAFLCRQTDLLVA--AAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE--------------R------ 166 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~--~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~--------------~------ 166 (290)
.+- ++..++..++.+. .-+.+.|+++... +++|...++ ..|.+ .+.++ +
T Consensus 103 ~V~-~~~~l~~~~~~~~i~~~~~g~~v~~~~~---~~~e~~~a~----~~Gad-~V~~~G~~g~g~~~~~~~h~rt~~~~ 173 (305)
T 2nv1_A 103 YID-ESEVLTPADEEFHLNKNEYTVPFVCGCR---DLGEATRRI----AEGAS-MLRTKGEPGTGNIVEAVRHMRKVNAQ 173 (305)
T ss_dssp EEE-ECTTSCCSCSSCCCCGGGCSSCEEEEES---SHHHHHHHH----HTTCS-EEEECCCTTSCCTHHHHHHHHHHHHH
T ss_pred EEE-EeccCCHHHHHHHHHHhccCCcEEEEeC---CHHHHHHHH----HCCCC-EEEeccccCccchHHHHhhhhhhhcc
Confidence 874 5444433222111 1245888888653 788777664 35654 44442 1
Q ss_pred -----cCC-CC-CC---CCCCCchhHHHHHh-cCCCEE--EeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 022892 167 -----GTM-FG-YN---DLIVDPRNLEWMRE-ANCPVV--ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 233 (290)
Q Consensus 167 -----gs~-~~-y~---~~~~dL~~i~~lk~-~~~pV~--~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G 233 (290)
|.+ .. |. ....++..+..+++ .++||+ ....-. . +.-+..+..+|
T Consensus 174 i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~-----------------~-----~~d~~~~~~~G 231 (305)
T 2nv1_A 174 VRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVA-----------------T-----PADAALMMQLG 231 (305)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCC-----------------S-----HHHHHHHHHTT
T ss_pred chhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCC-----------------C-----HHHHHHHHHcC
Confidence 110 00 00 01245667777777 688986 422111 1 22344556789
Q ss_pred CCEEEEeeeC
Q 022892 234 VDGVFMEVHD 243 (290)
Q Consensus 234 A~G~~IEkH~ 243 (290)
|+|+++=+-+
T Consensus 232 adgV~vGsai 241 (305)
T 2nv1_A 232 ADGVFVGSGI 241 (305)
T ss_dssp CSCEEECGGG
T ss_pred CCEEEEcHHH
Confidence 9999998876
No 167
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=90.79 E-value=1.5 Score=41.27 Aligned_cols=134 Identities=15% Similarity=0.061 Sum_probs=70.3
Q ss_pred HHHHHHhcCCcEEEeecCccc---HHHHhh-hcceecccCCc---------cCCHHHHHHHHhcCCeEEEeCCCCCCHHH
Q 022892 79 LEKVKIAYDIPIVTDVHETVQ---CEEVGK-VADIIQIPAFL---------CRQTDLLVAAAKTGKIINIKKGQFCASSV 145 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~---~~~l~~-~~d~~kIgs~~---------~~n~~lL~~~a~~~~PVilstG~~~tl~e 145 (290)
+.+.+++.|++++..+.-... +..+.+ .+|++.+.... ....++-+.....+.||+++.. . |.++
T Consensus 147 ~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi-~-t~e~ 224 (393)
T 2qr6_A 147 RIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGV-N-DYTT 224 (393)
T ss_dssp HHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECC-C-SHHH
T ss_pred HHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCc-C-CHHH
Confidence 344455569888875542222 223323 47776553211 1112232334457999999543 3 7888
Q ss_pred HHHHHHHHHHcCCCcEEEEeecC---CC--CCCCCCCCchhHHHHHh--------cC---CCEEEeCCCCCCCCCCCccC
Q 022892 146 MVNSAEKVRLAGNPNVMVCERGT---MF--GYNDLIVDPRNLEWMRE--------AN---CPVVADVTHSLQQPAGKKLD 209 (290)
Q Consensus 146 ~~~Ave~i~~~Gn~~i~L~~~gs---~~--~y~~~~~dL~~i~~lk~--------~~---~pV~~D~sHs~~~~~~~~~~ 209 (290)
...+. ..|-+-|++- .|. .+ ++. ...+..++.+++ .+ +||+.|..-.
T Consensus 225 a~~~~----~~Gad~i~vg-~Gg~~~~~~~~~g--~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~---------- 287 (393)
T 2qr6_A 225 ALHMM----RTGAVGIIVG-GGENTNSLALGME--VSMATAIADVAAARRDYLDETGGRYVHIIADGSIE---------- 287 (393)
T ss_dssp HHHHH----TTTCSEEEES-CCSCCHHHHTSCC--CCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC----------
T ss_pred HHHHH----HcCCCEEEEC-CCcccccccCCCC--CChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC----------
Confidence 66554 4677666662 211 10 111 123445544332 23 8998853322
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 210 GGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 210 ~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
.+ .. +..|+++||++++|=+-|
T Consensus 288 ------~~-----~d-v~kalalGA~~V~iG~~~ 309 (393)
T 2qr6_A 288 ------NS-----GD-VVKAIACGADAVVLGSPL 309 (393)
T ss_dssp ------SH-----HH-HHHHHHHTCSEEEECGGG
T ss_pred ------CH-----HH-HHHHHHcCCCEEEECHHH
Confidence 12 23 345688999999998876
No 168
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=90.72 E-value=3.4 Score=38.11 Aligned_cols=100 Identities=13% Similarity=0.051 Sum_probs=66.0
Q ss_pred HHHHHHHhcCCeEEEeCCC--CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cC----CCEE
Q 022892 121 DLLVAAAKTGKIINIKKGQ--FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPVV 193 (290)
Q Consensus 121 ~lL~~~a~~~~PVilstG~--~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~----~pV~ 193 (290)
+.++++-+.++.|.+..-. -.+++.+.+.++.+...|...|.|+..... ..|.. + ..-+..+++ ++ +|++
T Consensus 126 ~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~-~~P~~-v-~~lv~~l~~~~~~~~~~~i~ 202 (325)
T 3eeg_A 126 AAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY-MLPWQ-Y-GERIKYLMDNVSNIDKAILS 202 (325)
T ss_dssp HHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC-CCHHH-H-HHHHHHHHHHCSCGGGSEEE
T ss_pred HHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCC-cCHHH-H-HHHHHHHHHhCCCCCceEEE
Confidence 4556667788888776421 238888888888888889887766665442 12221 2 144566776 54 8899
Q ss_pred EeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 194 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 194 ~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
+ +.|-. +.+...-+.+|+.+||+ .++.=+.
T Consensus 203 ~-H~Hnd------------------~GlA~AN~laA~~aGa~--~vd~tv~ 232 (325)
T 3eeg_A 203 A-HCHND------------------LGLATANSLAALQNGAR--QVECTIN 232 (325)
T ss_dssp E-CBCCT------------------TSCHHHHHHHHHHHTCC--EEEEBGG
T ss_pred E-EeCCC------------------CCHHHHHHHHHHHhCCC--EEEEecc
Confidence 8 77763 22335567789999998 7777653
No 169
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=90.71 E-value=0.88 Score=43.03 Aligned_cols=74 Identities=8% Similarity=-0.063 Sum_probs=58.9
Q ss_pred HHHHHHHhcCCc---EEEeecCcccHHHHhh-------hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 022892 78 ILEKVKIAYDIP---IVTDVHETVQCEEVGK-------VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 78 ~L~~~~~~~Gi~---~~s~~~d~~~~~~l~~-------~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~ 147 (290)
..+++++++|++ +.+ +.+.+.+ .+|++-|.+-.-.+.++..++.+.||+|++.+.++.+++|..
T Consensus 78 ~a~~~a~~~g~~~~~~~~------~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~ 151 (417)
T 3v5n_A 78 KAEASGRELGLDPSRVYS------DFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAK 151 (417)
T ss_dssp HHHHHHHHHTCCGGGBCS------CHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHH
T ss_pred HHHHHHHHcCCCcccccC------CHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHH
Confidence 456777888985 322 3444433 399999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 022892 148 NSAEKVRLAG 157 (290)
Q Consensus 148 ~Ave~i~~~G 157 (290)
..++..++.|
T Consensus 152 ~l~~~a~~~g 161 (417)
T 3v5n_A 152 KLKKAADESD 161 (417)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHHcC
Confidence 8887666554
No 170
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=90.67 E-value=7.6 Score=33.46 Aligned_cols=163 Identities=13% Similarity=0.153 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCccc---------H
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQ---------C 100 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~---------~ 100 (290)
....++++.+.......+++.++...|. -+ ..+++..++|+..-=.++.+ +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l---~~v~~~~~~~v~aqd~~~~~~ga~tGei~~ 75 (219)
T 2h6r_A 16 NRGLEIAKIAEKVSEESGITIGVAPQFV-----------------DL---RMIVENVNIPVYAQHIDNINPGSHTGHILA 75 (219)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCTT-----------------TH---HHHHHHCCSCBEESCCCSCCSBSCTTCCCH
T ss_pred HHHHHHHHHHHhcccccCCcEEEECCHH-----------------HH---HHHHHHcCCcEEEEECChhhcCCccCchHH
Confidence 5677888888765444456666554333 12 33344458999983344545 8
Q ss_pred HHHhh-hcceecccCCc--cC---CHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-----
Q 022892 101 EEVGK-VADIIQIPAFL--CR---QTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM----- 169 (290)
Q Consensus 101 ~~l~~-~~d~~kIgs~~--~~---n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~----- 169 (290)
+.+.+ .+|++-||..+ .. -..+++.+-+.|+.+++.-+.. +|...+ ...|. .++-++....
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~---~e~~~~----~~~~~-~~i~~~~~~~iGtG~ 147 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI---NTSKAV----AALSP-DCIAVEPPELIGTGI 147 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS---HHHHHH----TTTCC-SEEEECCCC------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc---hHHHHH----HhCCC-CEEEEEeccccccCC
Confidence 88887 69999998753 21 1245555667899999998854 233332 22233 3444443220
Q ss_pred --CCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 170 --FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 170 --~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
-......+. .....+|+ . ++||++..+=. . +..+......|+||+++=+-+
T Consensus 148 ~~~t~~~~~~~-~~~~~ir~~~~~~~ii~ggGI~-----------------~-----~~~~~~~~~~gaDgvlVGsAi 202 (219)
T 2h6r_A 148 PVSKANPEVVE-GTVRAVKEINKDVKVLCGAGIS-----------------K-----GEDVKAALDLGAEGVLLASGV 202 (219)
T ss_dssp --------CSH-HHHHHHHHHCTTCEEEECSSCC-----------------S-----HHHHHHHHTTTCCCEEESHHH
T ss_pred CCccCCHHHHH-HHHHHHHhccCCCeEEEEeCcC-----------------c-----HHHHHHHhhCCCCEEEEcHHH
Confidence 001111122 34444555 3 78888743322 1 344555677899999986543
No 171
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=90.34 E-value=1.3 Score=42.09 Aligned_cols=133 Identities=19% Similarity=0.054 Sum_probs=74.8
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEE
Q 022892 119 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 194 (290)
Q Consensus 119 n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~ 194 (290)
..+.++++-+ +++||++| |.. +.++.+.+ ...|-+-|++--.|....+ ....++..++.+++ . ++||+.
T Consensus 240 ~~~~i~~lr~~~~~PvivK-gv~-~~e~A~~a----~~aGad~I~vs~~ggr~~~-~g~~~~~~l~~v~~av~~~ipVia 312 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAK-GIL-RGDDAREA----VKHGLNGILVSNHGARQLD-GVPATIDVLPEIVEAVEGKVEVFL 312 (392)
T ss_dssp CHHHHHHHC--CCSCEEEE-EEC-CHHHHHHH----HHTTCCEEEECCGGGTSST-TCCCHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHhhCCCEEEE-ecC-CHHHHHHH----HHcCCCEEEeCCCCCCcCC-CCcChHHHHHHHHHHcCCCCEEEE
Confidence 3455676644 68999999 444 77776554 4567665665433332111 11235567777776 4 599988
Q ss_pred eCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 195 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 195 D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
|..=. .| .. +..|+++||++++|=+-+--... ..+... -.+-++.+.++++..-..
T Consensus 313 ~GGI~----------------~g-----~D-v~kalalGAd~V~iGr~~l~~~~-~~g~~g-v~~~l~~l~~el~~~m~~ 368 (392)
T 2nzl_A 313 DGGVR----------------KG-----TD-VLKALALGAKAVFVGRPIVWGLA-FQGEKG-VQDVLEILKEEFRLAMAL 368 (392)
T ss_dssp CSSCC----------------SH-----HH-HHHHHHTTCSEEEECHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ECCCC----------------CH-----HH-HHHHHHhCCCeeEECHHHHHHHH-hcChHH-HHHHHHHHHHHHHHHHHH
Confidence 53322 12 33 44568899999999874421000 000000 012466677777777777
Q ss_pred hCCccccc
Q 022892 275 SKGKQRMN 282 (290)
Q Consensus 275 lg~~~~~~ 282 (290)
.|.+.+-+
T Consensus 369 ~G~~~i~e 376 (392)
T 2nzl_A 369 SGCQNVKV 376 (392)
T ss_dssp HTCSBGGG
T ss_pred hCCCcHHH
Confidence 88755443
No 172
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=90.34 E-value=8 Score=35.50 Aligned_cols=174 Identities=15% Similarity=0.083 Sum_probs=94.9
Q ss_pred HHhcCCcEEEee-cCcccHHH---Hhh-h--cceecccCC--c-cCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 83 KIAYDIPIVTDV-HETVQCEE---VGK-V--ADIIQIPAF--L-CRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 83 ~~~~Gi~~~s~~-~d~~~~~~---l~~-~--~d~~kIgs~--~-~~n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave 151 (290)
+++.|+++...+ .+++.++. +.+ . ++++.|... + ..+.+.++++.+ ++.|++++-+.. +.++.+.++
T Consensus 90 ~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~-s~e~A~~a~- 167 (336)
T 1ypf_A 90 MQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVG-TPEAVRELE- 167 (336)
T ss_dssp HHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHHHH-
T ss_pred HHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcC-CHHHHHHHH-
Confidence 455687766653 23333333 333 3 677665321 1 123456677654 344555553233 777766654
Q ss_pred HHHHcCCCcEEEE-eecCCC--------CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCccc
Q 022892 152 KVRLAGNPNVMVC-ERGTMF--------GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLREL 221 (290)
Q Consensus 152 ~i~~~Gn~~i~L~-~~gs~~--------~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~ 221 (290)
..|-+-|++- |.|... +.+ ...+..++.+++ .++||+.|..=. .+
T Consensus 168 ---~aGad~Ivvs~hgG~~~~~~~~~~~g~~--g~~~~~l~~v~~~~~ipVIa~GGI~----------------~g---- 222 (336)
T 1ypf_A 168 ---NAGADATKVGIGPGKVCITKIKTGFGTG--GWQLAALRWCAKAASKPIIADGGIR----------------TN---- 222 (336)
T ss_dssp ---HHTCSEEEECSSCSTTCHHHHHHSCSST--TCHHHHHHHHHHTCSSCEEEESCCC----------------ST----
T ss_pred ---HcCCCEEEEecCCCceeecccccCcCCc--hhHHHHHHHHHHHcCCcEEEeCCCC----------------CH----
Confidence 4576555552 222210 111 014567777777 689999864322 13
Q ss_pred HHHHHHHHHHcCCCEEEEeeeCCCC-C-----------------CC-CCCCC-------CCC---------hHHHHHHHH
Q 022892 222 IPCIARTAIAVGVDGVFMEVHDDPL-N-----------------AP-VDGPT-------QWP---------LRNLEELLE 266 (290)
Q Consensus 222 ~~~~a~aAva~GA~G~~IEkH~t~d-k-----------------a~-~D~~~-------sl~---------p~~l~~lv~ 266 (290)
..+. .|.++||++++|=+-|--- . .+ +.... -.+ .+-++.|++
T Consensus 223 -~Dv~-kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~ 300 (336)
T 1ypf_A 223 -GDVA-KSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQ 300 (336)
T ss_dssp -HHHH-HHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHHHHHH
T ss_pred -HHHH-HHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHHHHHH
Confidence 3444 5688999999998877521 0 10 00000 000 156788899
Q ss_pred HHHHHHHHhCCccccccCC
Q 022892 267 ELVAIAKVSKGKQRMNIDL 285 (290)
Q Consensus 267 ~ir~~~~~lg~~~~~~~~~ 285 (290)
+++..-..+|.+++-++..
T Consensus 301 el~~~m~~~G~~~i~el~~ 319 (336)
T 1ypf_A 301 DLQSSISYAGGTKLDSIRT 319 (336)
T ss_dssp HHHHHHHHTTSSBGGGGGG
T ss_pred HHHHHHHHhCcccHHHhCc
Confidence 9999988889877766543
No 173
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=90.30 E-value=1.2 Score=41.60 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=59.2
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|+++.+ +++.+ .+ .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 41 ~~~~a~~~g~~~~~------~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 114 (387)
T 3moi_A 41 RERFGKEYGIPVFA------TLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERA 114 (387)
T ss_dssp HHHHHHHHTCCEES------SHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEC------CHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHh
Confidence 45566778998543 34444 44 599999999998899999999999999999999999999999888877666
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 115 g 115 (387)
T 3moi_A 115 G 115 (387)
T ss_dssp T
T ss_pred C
Confidence 5
No 174
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.16 E-value=5.7 Score=38.59 Aligned_cols=115 Identities=16% Similarity=0.131 Sum_probs=74.8
Q ss_pred hcceeccc--CCccCCH-HHHHHHHhcCCeEE--Ee--CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCC
Q 022892 106 VADIIQIP--AFLCRQT-DLLVAAAKTGKIIN--IK--KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVD 178 (290)
Q Consensus 106 ~~d~~kIg--s~~~~n~-~lL~~~a~~~~PVi--ls--tG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~d 178 (290)
.+|.+-|- ..++.|. +.++++-+.|+.|. ++ -|.-.+++.+.+.++.+...|.+.|.|+.-... ..|.. +
T Consensus 113 Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~-~~P~~-v- 189 (464)
T 2nx9_A 113 GMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGI-LTPYA-A- 189 (464)
T ss_dssp TCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC-CCHHH-H-
T ss_pred CcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC-cCHHH-H-
Confidence 35554433 2333444 45566667888874 32 244448899999999999999988888876552 12221 1
Q ss_pred chhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 179 PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 179 L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
..-+..+++ +++||++ +.|-. .| +...-+.+|+.+||+ +|+.-+.
T Consensus 190 ~~lv~~l~~~~~~~i~~-H~Hnd---------------~G---lAvAN~laAv~AGa~--~VD~ti~ 235 (464)
T 2nx9_A 190 EELVSTLKKQVDVELHL-HCHST---------------AG---LADMTLLKAIEAGVD--RVDTAIS 235 (464)
T ss_dssp HHHHHHHHHHCCSCEEE-EECCT---------------TS---CHHHHHHHHHHTTCS--EEEEBCG
T ss_pred HHHHHHHHHhcCCeEEE-EECCC---------------CC---hHHHHHHHHHHhCCC--EEEEecc
Confidence 144566777 7899999 88864 12 335567789999998 8887665
No 175
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=90.15 E-value=0.9 Score=41.57 Aligned_cols=75 Identities=13% Similarity=0.044 Sum_probs=58.3
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|++-.. .+.+. +.+ .+|++-|.+-.-...++..++.+.||+|++.+.++.|++|....++..++
T Consensus 57 ~~~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 131 (340)
T 1zh8_A 57 HAEEFAKMVGNPAVF-----DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEK 131 (340)
T ss_dssp HHHHHHHHHSSCEEE-----SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 345667788873221 23444 444 69999999999889999999999999999999999999999988887665
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 132 ~g 133 (340)
T 1zh8_A 132 SE 133 (340)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 176
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=90.10 E-value=3.9 Score=39.29 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s-~~~d~~~~~~l~~-~~d 108 (290)
.++.|+++.+ +|++++..+.-. +. ....+..+.++++.+ ++|++. .+.+.+.+..+.+ .+|
T Consensus 234 ~~~~a~~l~~----~G~d~ivi~~a~-----------g~-~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad 297 (491)
T 1zfj_A 234 TFERAEALFE----AGADAIVIDTAH-----------GH-SAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVD 297 (491)
T ss_dssp HHHHHHHHHH----HTCSEEEECCSC-----------TT-CHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----cCCCeEEEeeec-----------Cc-chhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCC
Confidence 4566666666 599998876411 11 134566777888888 888875 5666666766666 699
Q ss_pred eecccCC-------------ccCCHHHHHHHHh----cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 109 IIQIPAF-------------LCRQTDLLVAAAK----TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 109 ~~kIgs~-------------~~~n~~lL~~~a~----~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+.||.. ...+...+++++. .+.||+.+-|.. +..++..|..
T Consensus 298 ~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~-~~~di~kal~ 356 (491)
T 1zfj_A 298 VVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIK-YSGDIVKALA 356 (491)
T ss_dssp EEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCC-SHHHHHHHHH
T ss_pred EEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCC-CHHHHHHHHH
Confidence 9988731 2345666666554 789999999999 9999998864
No 177
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.01 E-value=7.6 Score=32.41 Aligned_cols=169 Identities=14% Similarity=0.078 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE--eecC-ccc-HHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT--DVHE-TVQ-CEE 102 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s--~~~d-~~~-~~~ 102 (290)
+.+..++.++++.+ |+++++... . . | +..|...++++.+.+ +++++. -++| +.. ++.
T Consensus 11 ~~~~~~~~~~~~~~-----~v~~iev~~-~---~-----~----~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~ 72 (207)
T 3ajx_A 11 STEAALELAGKVAE-----YVDIIELGT-P---L-----I----KAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADI 72 (207)
T ss_dssp CHHHHHHHHHHHGG-----GCSEEEECH-H---H-----H----HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHH
T ss_pred CHHHHHHHHHHhhc-----cCCEEEECc-H---H-----H----HhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHH
Confidence 45555555555533 778766521 1 0 1 134445555555556 777775 3556 333 555
Q ss_pred Hhh-hcceecccCCc--cCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCc
Q 022892 103 VGK-VADIIQIPAFL--CRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDP 179 (290)
Q Consensus 103 l~~-~~d~~kIgs~~--~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL 179 (290)
+.+ .+|++-+.... ..-..+++.+.+.|+++.++.-...|+++....+ ...|- +.+-++.+....+.. .+.
T Consensus 73 a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~---~~~g~-d~v~~~~~~~~~~~g--~~~ 146 (207)
T 3ajx_A 73 AFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEV---RALGA-KFVEMHAGLDEQAKP--GFD 146 (207)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHH---HHTTC-SEEEEECCHHHHTST--TCC
T ss_pred HHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHH---HHhCC-CEEEEEecccccccC--CCc
Confidence 555 58888653221 2222444555566888866543221677733332 23454 444233332100111 112
Q ss_pred hhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 180 RNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 180 ~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
.. ..+|+ . ++||.++. |.+ +.-+..+++.||+|+++=+-++
T Consensus 147 ~~-~~i~~~~~~~~pi~v~G--------------------GI~---~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 147 LN-GLLAAGEKARVPFSVAG--------------------GVK---VATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp TH-HHHHHHHHHTSCEEEES--------------------SCC---GGGHHHHHHTTCSEEEESHHHH
T ss_pred hH-HHHHHhhCCCCCEEEEC--------------------CcC---HHHHHHHHHcCCCEEEEeeecc
Confidence 22 44555 3 78988752 211 1234556889999999877663
No 178
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.91 E-value=3.8 Score=37.22 Aligned_cols=65 Identities=15% Similarity=0.113 Sum_probs=42.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.+++..+ +|+|++.-.. |+ |.++.-+.-+...+++++..++|++-
T Consensus 71 ~grvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~~--------P~-y~~~~~~~l~~~f~~va~a~~lPiil 135 (300)
T 3eb2_A 71 QRRVPVVAGVAST-SVADAVAQAKLYEK----LGADGILAIL--------EA-YFPLKDAQIESYFRAIADAVEIPVVI 135 (300)
T ss_dssp TTSSCBEEEEEES-SHHHHHHHHHHHHH----HTCSEEEEEE--------CC-SSCCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEeCCCC-CHHHHHHHHHHHHH----cCCCEEEEcC--------CC-CCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 4567789998864 66667777766555 6999876531 22 21222133455677888888999874
No 179
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=89.90 E-value=2.7 Score=35.42 Aligned_cols=104 Identities=16% Similarity=0.097 Sum_probs=64.7
Q ss_pred HHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCccc----HHHHhh-hcceecccC
Q 022892 40 KSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQ----CEEVGK-VADIIQIPA 114 (290)
Q Consensus 40 ~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~----~~~l~~-~~d~~kIgs 114 (290)
++.+.++|++.|...... .++.+..+.+.++++|+.++.++..+.. +..+.+ .+|++.+..
T Consensus 70 ~~~~~~~Gad~v~v~~~~--------------~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVT--------------DVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp HHHHHHTTCSEEEEETTS--------------CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHhcCCCEEEEeCCC--------------ChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344455688777653221 1466788999999999999877555543 455555 488887642
Q ss_pred C------ccCCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 115 F------LCRQTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 115 ~------~~~n~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+ ...+.+.++++.+. +.||+..-|.. .+++..+ ...|.+-+++
T Consensus 136 g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~--~~~~~~~----~~~Gad~vvv 186 (211)
T 3f4w_A 136 GTDQQAAGRKPIDDLITMLKVRRKARIAVAGGIS--SQTVKDY----ALLGPDVVIV 186 (211)
T ss_dssp CHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC--TTTHHHH----HTTCCSEEEE
T ss_pred CCcccccCCCCHHHHHHHHHHcCCCcEEEECCCC--HHHHHHH----HHcCCCEEEE
Confidence 2 11366777777653 68998887764 5555443 3456544433
No 180
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=89.72 E-value=1 Score=43.86 Aligned_cols=126 Identities=9% Similarity=0.106 Sum_probs=86.9
Q ss_pred HHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC--CcEEEeecCcccHHHHhh---hcceecccCCc
Q 022892 42 ISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD--IPIVTDVHETVQCEEVGK---VADIIQIPAFL 116 (290)
Q Consensus 42 ~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G--i~~~s~~~d~~~~~~l~~---~~d~~kIgs~~ 116 (290)
.+.+.|+|.|....-.. .+.+.+++++..+.| +.+++-+-.++.++-+.+ ..|-+-||-+|
T Consensus 191 ~~~~~~vD~Ia~SfVr~--------------a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGD 256 (461)
T 3qtg_A 191 SPIRDNIDYVAISLAKS--------------CKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGD 256 (461)
T ss_dssp GGGGGGCCEEEECSCCS--------------HHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHH
T ss_pred HHhhcCCCEEEecCCCC--------------HHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEcccc
Confidence 55667999887753331 478899999998876 889999999988776666 47888888776
Q ss_pred c-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC
Q 022892 117 C-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV 177 (290)
Q Consensus 117 ~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~ 177 (290)
+ -|-.+++.+-..||||+.-|-|- .|-.|+-..+..+. .|-+-++|---+..-.||-
T Consensus 257 Lgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~-dGaDavMLSgETA~G~yPv--- 332 (461)
T 3qtg_A 257 LGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTAS-MGVDSLWLTNETASGKYPL--- 332 (461)
T ss_dssp HTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHH-TTCSEEEECHHHHTSSCHH---
T ss_pred ccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHH-hCCcEEEEcccccCCCCHH---
Confidence 6 34456777778999999955542 37788888887775 4665555532222223664
Q ss_pred CchhHHHHHh
Q 022892 178 DPRNLEWMRE 187 (290)
Q Consensus 178 dL~~i~~lk~ 187 (290)
.++.+|.+
T Consensus 333 --eaV~~m~~ 340 (461)
T 3qtg_A 333 --AAVSWLSR 340 (461)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 45566643
No 181
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.71 E-value=1.6 Score=39.15 Aligned_cols=158 Identities=13% Similarity=0.154 Sum_probs=86.4
Q ss_pred c-CCcEEEeecCc--ccHHH----Hh--hhcceecccC----------CccCC----HHHHHHHHh-cCCeEEEeCCCCC
Q 022892 86 Y-DIPIVTDVHET--VQCEE----VG--KVADIIQIPA----------FLCRQ----TDLLVAAAK-TGKIINIKKGQFC 141 (290)
Q Consensus 86 ~-Gi~~~s~~~d~--~~~~~----l~--~~~d~~kIgs----------~~~~n----~~lL~~~a~-~~~PVilstG~~~ 141 (290)
. +.++...++-. ++... +. ..+|++.|.- ....+ .++++++.+ .+.||++|....
T Consensus 96 ~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~- 174 (311)
T 1ep3_A 96 FPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN- 174 (311)
T ss_dssp CTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-
T ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-
Confidence 5 88999888754 22222 22 2366665421 11123 345555544 489999997633
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeec--------CCC--------CCCCCC---CCchhHHHHHh-cCCCEEEeCCCCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERG--------TMF--------GYNDLI---VDPRNLEWMRE-ANCPVVADVTHSLQ 201 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~g--------s~~--------~y~~~~---~dL~~i~~lk~-~~~pV~~D~sHs~~ 201 (290)
..++...++.+...|-+-|++.... +.. +|.... ..+..+..+++ .++||+....-.
T Consensus 175 -~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~-- 251 (311)
T 1ep3_A 175 -VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVA-- 251 (311)
T ss_dssp -SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCC--
T ss_pred -hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcC--
Confidence 2233444555667787666653211 100 010000 12355666777 789998732211
Q ss_pred CCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCc
Q 022892 202 QPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGK 278 (290)
Q Consensus 202 ~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~~ 278 (290)
. ..-+..++++||+++++=+.+.- +|+-++++.+.++..-...|-+
T Consensus 252 ---------------~-----~~d~~~~l~~GAd~V~vg~~~l~-----------~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 252 ---------------N-----AQDVLEMYMAGASAVAVGTANFA-----------DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp ---------------S-----HHHHHHHHHHTCSEEEECTHHHH-----------CTTHHHHHHHHHHHHHHHTTCS
T ss_pred ---------------C-----HHHHHHHHHcCCCEEEECHHHHc-----------CcHHHHHHHHHHHHHHHHcCCC
Confidence 1 33455667889999998877622 3556777777776655555543
No 182
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=89.70 E-value=0.86 Score=41.51 Aligned_cols=79 Identities=18% Similarity=0.080 Sum_probs=61.8
Q ss_pred HHHHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 022892 76 LKILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 153 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i 153 (290)
.+.+.+.++++|+.. ..| .+.+.+ .+ .+|++-|.+-.-.+.++..++.+.||+|++.+.++.+++|....++..
T Consensus 39 ~~~~~~~~~~~~~~~--~~~--~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 114 (337)
T 3ip3_A 39 LSKLEKAISEMNIKP--KKY--NNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVY 114 (337)
T ss_dssp CHHHHHHHHTTTCCC--EEC--SSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC--ccc--CCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH
Confidence 345566677788742 122 344444 43 599999999988888999999999999999999999999999999988
Q ss_pred HHcCC
Q 022892 154 RLAGN 158 (290)
Q Consensus 154 ~~~Gn 158 (290)
++.|.
T Consensus 115 ~~~g~ 119 (337)
T 3ip3_A 115 QKVRN 119 (337)
T ss_dssp HHHTT
T ss_pred HHhCC
Confidence 87764
No 183
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=89.70 E-value=1.2 Score=43.12 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=61.0
Q ss_pred cceecccCCccC-CHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC-CcEEEEeecCCCCCCCCCCC--c-hh
Q 022892 107 ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN-PNVMVCERGTMFGYNDLIVD--P-RN 181 (290)
Q Consensus 107 ~d~~kIgs~~~~-n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn-~~i~L~~~gs~~~y~~~~~d--L-~~ 181 (290)
..+++||-|+=+ +-..++.+.+..=||.+|-|.+++++|+.+-++.+--... -++.|+-|= +... |. | .-
T Consensus 276 aH~lWIGeRTRqlDgAHVef~rgI~NPIGvKvGP~~~p~elv~L~~~LnP~~epGRlTLI~Rm---Ga~k--v~~~LP~l 350 (462)
T 3rzi_A 276 AHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSRM---GNHK--VRDLLPPI 350 (462)
T ss_dssp CSEEEECTTTCCTTSHHHHHHHHCCSCEEEEECTTCCHHHHHHHHHHHCTTCCTTSEEEEECC---CTTT--HHHHHHHH
T ss_pred cccceeccccCCCCccHHHHHhcCCCCeeEeECCCCCHHHHHHHHHHhCCCCCCCeEEEEEcc---CCch--hhhhHHHH
Confidence 448899988653 3345577788888999999999999999999998732211 259998883 3322 22 1 22
Q ss_pred HHHHHhcCCCEEE--eCCCCC
Q 022892 182 LEWMREANCPVVA--DVTHSL 200 (290)
Q Consensus 182 i~~lk~~~~pV~~--D~sHs~ 200 (290)
|...++.|.+|++ |+=|+|
T Consensus 351 i~aV~~~G~~VvW~cDPMHGN 371 (462)
T 3rzi_A 351 VEKVQATGHQVIWQCDPMHGN 371 (462)
T ss_dssp HHHHHHTSCCCEEEECCSTTS
T ss_pred HHHHHHCCCCeEEEeCCCCCC
Confidence 3333447888876 777986
No 184
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=89.55 E-value=6.4 Score=38.15 Aligned_cols=188 Identities=16% Similarity=0.124 Sum_probs=112.0
Q ss_pred hhHHhhhcCCCCeEEEEccC-------CccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHH
Q 022892 5 TALFNQLKAAEPFFLLAGPN-------VIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLK 77 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpc-------sien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~ 77 (290)
.+++..+... .+-||||.= .|.......++|+...+ . |.++.- .|-+..|+| .+.
T Consensus 37 r~f~~al~~~-~~~vIaEvKraSPSkG~i~~~~~~~~iA~~y~~----~-A~~Isv-------LTd~~~F~g-----s~~ 98 (452)
T 1pii_A 37 RHFYDALQGA-RTAFILECKKASPSKGVIRDDFDPARIAAIYKH----Y-ASAISV-------LTDEKYFQG-----SFN 98 (452)
T ss_dssp SCHHHHHCSS-SCEEEEEECSEETTTEESCSSCCHHHHHHHHTT----T-CSEEEE-------ECCSTTTCC-----CTT
T ss_pred CCHHHHHhcC-CCceEEEecCCCCCCCccCCCCCHHHHHHHHHh----h-CcEEEE-------EecccccCC-----CHH
Confidence 3566666433 478999863 22211123455554433 3 666542 222333543 345
Q ss_pred HHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcceecccCCccCC---HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTD--VHETVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave 151 (290)
.|+++++..++|++.- +.|+.++..+.. .+|++-+=...+.. ..|++.+-++|+.+++... |.+|+..|++
T Consensus 99 dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh---~~eE~~~A~~ 175 (452)
T 1pii_A 99 FLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVS---NEEEQERAIA 175 (452)
T ss_dssp HHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHH
Confidence 5666666789999874 345555555555 58876554444543 2456666779999999987 8999998875
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHH
Q 022892 152 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIART 228 (290)
Q Consensus 152 ~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~a 228 (290)
.|.+=|-+-.|+ |....+|+.....|.. . +++|+.-|-=. . +.-+..
T Consensus 176 ----lga~iIGinnr~----L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~-----------------t-----~edv~~ 225 (452)
T 1pii_A 176 ----LGAKVVGINNRD----LRDLSIDLNRTRELAPKLGHNVTVISESGIN-----------------T-----YAQVRE 225 (452)
T ss_dssp ----TTCSEEEEESEE----TTTTEECTHHHHHHHHHHCTTSEEEEESCCC-----------------C-----HHHHHH
T ss_pred ----CCCCEEEEeCCC----CCCCCCCHHHHHHHHHhCCCCCeEEEECCCC-----------------C-----HHHHHH
Confidence 354434444443 5556678888877765 2 55665422111 1 444555
Q ss_pred HHHcCCCEEEEeeeCC
Q 022892 229 AIAVGVDGVFMEVHDD 244 (290)
Q Consensus 229 Ava~GA~G~~IEkH~t 244 (290)
+..+ |+|++|=..++
T Consensus 226 ~~~~-a~avLVGealm 240 (452)
T 1pii_A 226 LSHF-ANGFLIGSALM 240 (452)
T ss_dssp HTTT-CSEEEECHHHH
T ss_pred HHHh-CCEEEEcHHHc
Confidence 6677 99999988874
No 185
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=89.50 E-value=1.2 Score=37.53 Aligned_cols=80 Identities=11% Similarity=-0.060 Sum_probs=55.3
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHh-c-CCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAK-T-GKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~-~-~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
.+.++|++.|++++..++++.++....+ .+|++|+-........+++++.+ . +.||+..-|.. .+++.. ++
T Consensus 95 ~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia~GGI~--~~~~~~---~~- 168 (205)
T 1wa3_A 95 EISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVN--LDNVCE---WF- 168 (205)
T ss_dssp HHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEEBSSCC--TTTHHH---HH-
T ss_pred HHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEEcCCCC--HHHHHH---HH-
Confidence 4667788899999999998888877766 69999976544445677777755 4 68988888875 343333 33
Q ss_pred HcCCCcEEE
Q 022892 155 LAGNPNVMV 163 (290)
Q Consensus 155 ~~Gn~~i~L 163 (290)
..|..-+.+
T Consensus 169 ~~Ga~~v~v 177 (205)
T 1wa3_A 169 KAGVLAVGV 177 (205)
T ss_dssp HHTCSCEEE
T ss_pred HCCCCEEEE
Confidence 356544443
No 186
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.40 E-value=0.82 Score=41.93 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=70.1
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
+.|++..++-+..++-++||.-++..+++ .++.+.+++..+.+ ..|.| .++.- |++|+...++.|.+
T Consensus 9 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~--------~lG~p---D~~~v-t~~em~~~~~~I~~ 76 (295)
T 1s2w_A 9 TQLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSA--------QLGVR---DSNEA-SWTQVVEVLEFMSD 76 (295)
T ss_dssp HHHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHH--------TC-------------CHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHH--------hCCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 34666666667888889999999999988 69999998765442 12444 22333 78888877776653
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
. .++||++|-+.+- |..+.+...++.-+..||.
T Consensus 77 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~aGaa 109 (295)
T 1s2w_A 77 A-------------------------------SDVPILLDADTGY----------------GNFNNARRLVRKLEDRGVA 109 (295)
T ss_dssp T-------------------------------CSSCEEEECCSSC----------------SSHHHHHHHHHHHHHTTCC
T ss_pred c-------------------------------CCCCEEecCCCCC----------------CCHHHHHHHHHHHHHcCCc
Confidence 2 2478999988763 2222233344445678999
Q ss_pred EEEEeeeCC
Q 022892 236 GVFMEVHDD 244 (290)
Q Consensus 236 G~~IEkH~t 244 (290)
|+-||--..
T Consensus 110 gv~iED~~~ 118 (295)
T 1s2w_A 110 GACLEDKLF 118 (295)
T ss_dssp EEEEECBCC
T ss_pred EEEECCCCC
Confidence 999997643
No 187
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=89.38 E-value=0.86 Score=45.15 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=85.7
Q ss_pred HHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC---------CcEEEeecCcccHHHHhh---h
Q 022892 39 IKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD---------IPIVTDVHETVQCEEVGK---V 106 (290)
Q Consensus 39 L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G---------i~~~s~~~d~~~~~~l~~---~ 106 (290)
+++.+.+.|+|+|...+-.. .+.+..++++..+.| +++++-+-.++.++-+++ .
T Consensus 221 ~l~fa~~~~vD~ialSFVr~--------------~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~ 286 (526)
T 4drs_A 221 IVDFALKYNLDFIALSFVQN--------------GADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE 286 (526)
T ss_dssp HHHTTTTTTCSEEEETTCCS--------------HHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHH
T ss_pred HHHHHHHhccCeeeecccCc--------------hhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhh
Confidence 45667778999987653221 478999999998876 789999999998876666 5
Q ss_pred cceecccCCcc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeec
Q 022892 107 ADIIQIPAFLC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 107 ~d~~kIgs~~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
.|.+-|+=+|+ -|-.+++.+-..+||||+.|-|- .|=.|+-+.+..+. .|-+-++|---+
T Consensus 287 sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~-DGaDavMLSgET 365 (526)
T 4drs_A 287 SDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVL-DGSDCVMLSGET 365 (526)
T ss_dssp SSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHH-HTCSEEEESHHH
T ss_pred ccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHH-hCCceEEEcchh
Confidence 88888888776 34456677778899999988764 35577777777665 366555553222
Q ss_pred CCCCCCC
Q 022892 168 TMFGYND 174 (290)
Q Consensus 168 s~~~y~~ 174 (290)
..-.||-
T Consensus 366 A~G~yPv 372 (526)
T 4drs_A 366 ANGAFPF 372 (526)
T ss_dssp HSCSCHH
T ss_pred hcccCHH
Confidence 2223764
No 188
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=89.37 E-value=7.3 Score=36.46 Aligned_cols=144 Identities=13% Similarity=0.119 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE-eecCcc--------
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT-DVHETV-------- 98 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s-~~~d~~-------- 98 (290)
+.+..++.+.+-.+..+++|...|.-.+ . .++| .....|+++.++.||-+++ |-|..+
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIVd~T-------~----~g~G--Rd~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~ 143 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVVDPT-------P----NDCG--RNPAFLRRVAEETGLNIICATGYYYEGEGAPPYF 143 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEECC-------C----TTTT--CCHHHHHHHHHHHCCEEEEEECCCCGGGSCTHHH
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEEECC-------C----CCcC--cCHHHHHHHHHHcCCCEEEeCccccCcccCCccc
Confidence 3444455544444445667877665321 1 1233 4567788888888988765 544432
Q ss_pred --------cHHHHhh--------hc-------ceecccCC--ccCCH--HHHHH----HHhcCCeEEEeCCCCCCHHHHH
Q 022892 99 --------QCEEVGK--------VA-------DIIQIPAF--LCRQT--DLLVA----AAKTGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 99 --------~~~~l~~--------~~-------d~~kIgs~--~~~n~--~lL~~----~a~~~~PVilstG~~~tl~e~~ 147 (290)
+++.+.+ .+ -++|++.. .++.. ..+++ ...+|+||++-++-+ +. ..
T Consensus 144 ~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~-~~--~~ 220 (360)
T 3tn4_A 144 QFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIITHTQEG-TM--GP 220 (360)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTT-CC--HH
T ss_pred chhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcc-cC--CH
Confidence 1232222 11 14454433 23322 23444 346899999999876 32 12
Q ss_pred HHHHHHHHcCCC--cEEEEe-ecCCCCCCCCCCCchhHHHHHhcCCCEEEe
Q 022892 148 NSAEKVRLAGNP--NVMVCE-RGTMFGYNDLIVDPRNLEWMREANCPVVAD 195 (290)
Q Consensus 148 ~Ave~i~~~Gn~--~i~L~~-~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D 195 (290)
..++++++.|-+ +++++| |-+. |+.....+-+.|+-|.||
T Consensus 221 e~l~iL~eeG~~~~~vvi~H~~~~~--------d~~~~~~~l~~G~yl~fD 263 (360)
T 3tn4_A 221 EQAAYLLEHGADPKKIVIGHMCDNT--------DPDYHRKTLAYGVYIAFD 263 (360)
T ss_dssp HHHHHHHHTTCCGGGEEECCGGGCC--------CHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHcCCCCCceEEEcCCCCC--------CHHHHHHHHHcCCEEEEc
Confidence 334567777753 789999 5431 333333333468888886
No 189
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=89.33 E-value=1.3 Score=42.97 Aligned_cols=95 Identities=15% Similarity=0.051 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh---cc-eecccCCc--cCCHHHHHHHHh--cCCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV---AD-IIQIPAFL--CRQTDLLVAAAK--TGKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~---~d-~~kIgs~~--~~n~~lL~~~a~--~~~PVilstG~~~tl~ 144 (290)
++-++.+++.+++++|.++=+||++++.+-...+ +. -++|-+.+ ++|...++.+-. .---|++|-++.+++.
T Consensus 284 ~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgIT 363 (452)
T 3otr_A 284 EKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVT 363 (452)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHH
T ss_pred HHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHH
Confidence 3556677888999999999999999998876653 22 24444444 478776666533 2336888988888999
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecC
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
|+.++++..++.| -.+++-||..
T Consensus 364 Ealka~~lA~~~G-~~vmvshrSG 386 (452)
T 3otr_A 364 EAIEACLLAQKSG-WGVQVSHRSG 386 (452)
T ss_dssp HHHHHHHHHHHTT-CEEEEECCSS
T ss_pred HHHHHHHHHHHcC-CeEEEeCCCC
Confidence 9999998887776 3567777743
No 190
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=89.27 E-value=1.5 Score=39.73 Aligned_cols=72 Identities=19% Similarity=0.110 Sum_probs=57.6
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
..++++++|++ . .+.+.+ .+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 41 ~~~~~~~~~~~-~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~ 113 (331)
T 4hkt_A 41 AEAIAGAYGCE-V------RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDT 113 (331)
T ss_dssp HHHHHHHTTCE-E------CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCC-c------CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHc
Confidence 55667788987 2 234444 33 699999999999999999999999999999999999999998888766655
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 114 g 114 (331)
T 4hkt_A 114 K 114 (331)
T ss_dssp T
T ss_pred C
Confidence 4
No 191
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=89.18 E-value=3.4 Score=37.27 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=55.8
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD 93 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~ 93 (290)
++++-||+|.++. |...+++.+++..+ +|+|++.-. .|+.| ++.-+.-+...+++++..++|++-=
T Consensus 68 ~gr~pviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~y~-~~~~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 68 NKRIPIIAGTGAN-STREAIELTKAAKD----LGADAALLV--------TPYYN-KPTQEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEE--------CCCSS-CCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHHHHHh----cCCCEEEEc--------CCCCC-CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3567899999874 66667776666555 699987653 12212 2221233556778888899999842
Q ss_pred --------ecCcccHHHHhh--hcceecccCCccCCH
Q 022892 94 --------VHETVQCEEVGK--VADIIQIPAFLCRQT 120 (290)
Q Consensus 94 --------~~d~~~~~~l~~--~~d~~kIgs~~~~n~ 120 (290)
.++++.+..|.+ .+-.+|-.+.++.++
T Consensus 134 n~P~~tg~~l~~~~~~~La~~pnivgiK~ssgd~~~~ 170 (291)
T 3tak_A 134 NVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGDVPRG 170 (291)
T ss_dssp ECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCCHHHH
T ss_pred ecccccCCCCCHHHHHHHHcCCCEEEEEeCCCCHHHH
Confidence 233344444444 244566666665544
No 192
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=89.17 E-value=1.4 Score=44.39 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=81.9
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC--CcEEEeecCcccHHHHhh---hcceecccCC
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD--IPIVTDVHETVQCEEVGK---VADIIQIPAF 115 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G--i~~~s~~~d~~~~~~l~~---~~d~~kIgs~ 115 (290)
+.+.+.|+|.|...+-.. .+.+.+++++..+.| +.+++-+-.++.++-+++ ..|-+-|+-+
T Consensus 200 ~f~~~~~vD~Ia~SFVr~--------------a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARG 265 (606)
T 3t05_A 200 RFGIKENVDFIAASFVRR--------------PSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARG 265 (606)
T ss_dssp HHHHHTTCSEEEETTCCS--------------HHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHH
T ss_pred HHHHHcCCCEEEECCCCC--------------HHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccc
Confidence 445567999987753331 477889999987765 899999998888766655 5888888777
Q ss_pred cc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC
Q 022892 116 LC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND 174 (290)
Q Consensus 116 ~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~ 174 (290)
|+ -|-.+++.+-+.+|||++-|-|- .|=.|+-+.+..+. .|-+-++|---+..-.||.
T Consensus 266 DLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~-dGaDavMLSgETA~G~yPv 342 (606)
T 3t05_A 266 DMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIY-DGTDAVMLSGETAAGLYPE 342 (606)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHH-HTCSEEEECHHHHSCSCSH
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHH-cCCCEEEecccccCCCCHH
Confidence 65 34567777888999999965552 26678877777765 3565555532222223764
No 193
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=89.17 E-value=1.8 Score=39.26 Aligned_cols=74 Identities=20% Similarity=0.181 Sum_probs=58.1
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHh-h-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVG-K-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~-~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|++-. ..+.+.+. + .+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 43 ~~~~~~~~~~~~~-----~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~ 117 (330)
T 3e9m_A 43 AQKMAKELAIPVA-----YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ 117 (330)
T ss_dssp HHHHHHHTTCCCC-----BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCce-----eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 4566777888521 13444443 3 699999999999999999999999999999999999999999888876665
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 118 g 118 (330)
T 3e9m_A 118 G 118 (330)
T ss_dssp T
T ss_pred C
Confidence 4
No 194
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.16 E-value=11 Score=35.26 Aligned_cols=176 Identities=10% Similarity=0.061 Sum_probs=99.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEE-eecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s-~~~d~~~~~~l~~ 105 (290)
+.+.-+++|++|.++ |++.|=-.++. .+ +..++.+++.++.. +..+.+ ..-....++...+
T Consensus 32 ~~~~Kl~ia~~L~~~----Gv~~IE~g~p~----~~---------~~d~e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~ 94 (370)
T 3rmj_A 32 TKEEKIRVARQLEKL----GVDIIEAGFAA----AS---------PGDFEAVNAIAKTITKSTVCSLSRAIERDIRQAGE 94 (370)
T ss_dssp CHHHHHHHHHHHHHH----TCSEEEEEEGG----GC---------HHHHHHHHHHHTTCSSSEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCEEEEeCCC----CC---------HHHHHHHHHHHHhCCCCeEEEEecCCHHHHHHHHH
Confidence 678899999999885 99876544321 11 23444444444322 222221 1123344443322
Q ss_pred -----hccee--cccCCccCC-----------HH----HHHHHHhcCCeEEEeC--CCCCCHHHHHHHHHHHHHcCCCcE
Q 022892 106 -----VADII--QIPAFLCRQ-----------TD----LLVAAAKTGKIINIKK--GQFCASSVMVNSAEKVRLAGNPNV 161 (290)
Q Consensus 106 -----~~d~~--kIgs~~~~n-----------~~----lL~~~a~~~~PVilst--G~~~tl~e~~~Ave~i~~~Gn~~i 161 (290)
.++.+ -+++.+..+ .+ .++++-..+..|.++. +.-.+++.+.+.++.+...|...|
T Consensus 95 al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i 174 (370)
T 3rmj_A 95 AVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTI 174 (370)
T ss_dssp HHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEE
Confidence 12222 222222211 22 3344445677777765 223388889999998999999888
Q ss_pred EEEeecCCCCCCCCCCCchhHHHHHh-cC----CCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCE
Q 022892 162 MVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236 (290)
Q Consensus 162 ~L~~~gs~~~y~~~~~dL~~i~~lk~-~~----~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G 236 (290)
.|+..... ..|.. + ..-+..+++ +. +|+.+ +.|-. +.+...-+.+|+.+||+
T Consensus 175 ~l~DT~G~-~~P~~-~-~~lv~~l~~~~~~~~~~~l~~-H~Hnd------------------~GlAvAN~laAv~aGa~- 231 (370)
T 3rmj_A 175 NIPDTVGY-SIPYK-T-EEFFRELIAKTPNGGKVVWSA-HCHND------------------LGLAVANSLAALKGGAR- 231 (370)
T ss_dssp EEECSSSC-CCHHH-H-HHHHHHHHHHSTTGGGSEEEE-ECBCT------------------TSCHHHHHHHHHHTTCC-
T ss_pred EecCccCC-cCHHH-H-HHHHHHHHHhCCCcCceEEEE-EeCCC------------------CChHHHHHHHHHHhCCC-
Confidence 88886652 12221 1 134566776 53 78988 77753 22335567789999998
Q ss_pred EEEeeeCC
Q 022892 237 VFMEVHDD 244 (290)
Q Consensus 237 ~~IEkH~t 244 (290)
.++.-+.
T Consensus 232 -~vd~tv~ 238 (370)
T 3rmj_A 232 -QVECTVN 238 (370)
T ss_dssp -EEEEBGG
T ss_pred -EEEEecc
Confidence 7777553
No 195
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=89.14 E-value=8 Score=38.33 Aligned_cols=116 Identities=15% Similarity=0.101 Sum_probs=75.5
Q ss_pred hcceeccc--CCccCCH-HHHHHHHhcCCeE--EEeC--CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCC
Q 022892 106 VADIIQIP--AFLCRQT-DLLVAAAKTGKII--NIKK--GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVD 178 (290)
Q Consensus 106 ~~d~~kIg--s~~~~n~-~lL~~~a~~~~PV--ilst--G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~d 178 (290)
.++++-|- ..++.|. +.++++-+.|+.| .++. |.-.+++.+.+.++.+...|...|.|+.-... ..|.. +
T Consensus 130 Gvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~-~~P~~-v- 206 (539)
T 1rqb_A 130 GMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAAL-LKPQP-A- 206 (539)
T ss_dssp TCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCC-CCHHH-H-
T ss_pred CCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC-cCHHH-H-
Confidence 45655443 3334444 4556666788877 4643 44448999999999999999887777776542 12221 1
Q ss_pred chhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCC
Q 022892 179 PRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 245 (290)
Q Consensus 179 L~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~ 245 (290)
..-+..+++ + ++||++ +.|-. +.+...-+.+|+.+||+ .|+.-+.+
T Consensus 207 ~~lv~~l~~~~p~~i~I~~-H~Hnd------------------~GlAvAN~laAveAGa~--~VD~ti~g 255 (539)
T 1rqb_A 207 YDIIKAIKDTYGQKTQINL-HCHST------------------TGVTEVSLMKAIEAGVD--VVDTAISS 255 (539)
T ss_dssp HHHHHHHHHHHCTTCCEEE-EEBCT------------------TSCHHHHHHHHHHTTCS--EEEEBCGG
T ss_pred HHHHHHHHHhcCCCceEEE-EeCCC------------------CChHHHHHHHHHHhCCC--EEEEeccc
Confidence 245666777 6 799999 78863 22335567789999998 88876654
No 196
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=89.12 E-value=1.4 Score=39.73 Aligned_cols=71 Identities=10% Similarity=0.045 Sum_probs=54.9
Q ss_pred HHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 81 KVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 81 ~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
++++++|+++ + .+.+.+.+.+|++-|....-...++...+.+.||+|++.+.++.+++|....++..++.|
T Consensus 46 ~~~~~~g~~~----~--~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g 116 (319)
T 1tlt_A 46 PICESWRIPY----A--DSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK 116 (319)
T ss_dssp HHHHHHTCCB----C--SSHHHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCc----c--CcHHHhhcCCCEEEEeCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 4456778872 2 233445457999999999888888888888999999999998889999888877666554
No 197
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=89.12 E-value=3.5 Score=35.91 Aligned_cols=166 Identities=12% Similarity=0.078 Sum_probs=87.7
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHH-hcCCcEEEeecCcc-cHHHHhh-hcceecccCC--
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKI-AYDIPIVTDVHETV-QCEEVGK-VADIIQIPAF-- 115 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~-~~Gi~~~s~~~d~~-~~~~l~~-~~d~~kIgs~-- 115 (290)
+.+.+.|++.+-..--+ ...-|. -.++ .+.++.+++.++ .+++.+++ .|++ .++.+.+ .+|.+-++..
T Consensus 24 ~~~~~~Gad~ihldi~D--G~fvp~--~~~g-~~~v~~lr~~~~~~~~vhlmv--~dp~~~i~~~~~aGadgv~vh~e~~ 96 (230)
T 1tqj_A 24 KAVDEAGADWIHVDVMD--GRFVPN--ITIG-PLIVDAIRPLTKKTLDVHLMI--VEPEKYVEDFAKAGADIISVHVEHN 96 (230)
T ss_dssp HHHHHTTCSEEEEEEEB--SSSSSC--BCBC-HHHHHHHGGGCCSEEEEEEES--SSGGGTHHHHHHHTCSEEEEECSTT
T ss_pred HHHHHcCCCEEEEEEEe--cCCCcc--hhhh-HHHHHHHHhhcCCcEEEEEEc--cCHHHHHHHHHHcCCCEEEECcccc
Confidence 33445799886333221 111111 1123 345555655552 44444555 4542 3555555 6899988866
Q ss_pred ccC-CHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCC---CCCchhHHHHHh-c--
Q 022892 116 LCR-QTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDL---IVDPRNLEWMRE-A-- 188 (290)
Q Consensus 116 ~~~-n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~---~~dL~~i~~lk~-~-- 188 (290)
... -...++.+-+.|+-++++..+. |+.|...++ . .+-+ .+++-+.. .++... ..-+..+..+|+ .
T Consensus 97 ~~~~~~~~~~~i~~~g~~~gv~~~p~-t~~e~~~~~---~-~~~D-~v~~msv~-pg~ggq~~~~~~~~~i~~lr~~~~~ 169 (230)
T 1tqj_A 97 ASPHLHRTLCQIRELGKKAGAVLNPS-TPLDFLEYV---L-PVCD-LILIMSVN-PGFGGQSFIPEVLPKIRALRQMCDE 169 (230)
T ss_dssp TCTTHHHHHHHHHHTTCEEEEEECTT-CCGGGGTTT---G-GGCS-EEEEESSC-C----CCCCGGGHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHcCCcEEEEEeCC-CcHHHHHHH---H-hcCC-EEEEEEec-cccCCccCcHHHHHHHHHHHHHHHh
Confidence 332 3356777778899999999777 766654432 2 2333 34332221 111111 123455666666 4
Q ss_pred ---CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 189 ---NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 189 ---~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
++||.+|--=+ ..-+.....+||||+++=+-+
T Consensus 170 ~~~~~~I~v~GGI~-----------------------~~~~~~~~~aGad~vvvGSai 204 (230)
T 1tqj_A 170 RGLDPWIEVDGGLK-----------------------PNNTWQVLEAGANAIVAGSAV 204 (230)
T ss_dssp HTCCCEEEEESSCC-----------------------TTTTHHHHHHTCCEEEESHHH
T ss_pred cCCCCcEEEECCcC-----------------------HHHHHHHHHcCCCEEEECHHH
Confidence 78888762211 111334466799999998776
No 198
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=89.06 E-value=1.5 Score=40.01 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=58.3
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHh-h-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVG-K-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~-~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..++.++++|++.. .+.+.+. + .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++
T Consensus 42 ~~~~~~~~~g~~~~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~ 115 (354)
T 3db2_A 42 KREKFGKRYNCAGD------ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE 115 (354)
T ss_dssp HHHHHHHHHTCCCC------SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCc------CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH
Confidence 34556677888752 3444444 3 69999999999999999999999999999999999999999888876665
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 116 ~~ 117 (354)
T 3db2_A 116 TG 117 (354)
T ss_dssp HC
T ss_pred cC
Confidence 54
No 199
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=89.02 E-value=11 Score=32.83 Aligned_cols=139 Identities=10% Similarity=0.020 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHhcCCcEEEe--ecCcc-cHHHHhh-hcceecccCCccCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTD--VHETV-QCEEVGK-VADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVN 148 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~--~~d~~-~~~~l~~-~~d~~kIgs~~~~n~-~lL~~~a~~~~PVilstG~~~tl~e~~~ 148 (290)
.-++.+++.. ...+++-.- +.++. .++.+.+ .+|++.+......+. ..++++-+.|+-+++..... |..|...
T Consensus 52 ~~v~~ir~~~-~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~-t~~e~l~ 129 (228)
T 3ovp_A 52 PVVESLRKQL-GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG-TSVEYLA 129 (228)
T ss_dssp HHHHHHHHHH-CSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTT-SCGGGTG
T ss_pred HHHHHHHHhh-CCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCC-CCHHHHH
Confidence 4455555553 023444332 23332 3555555 699999988665543 46677778898888888877 4433322
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCC---CCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHH
Q 022892 149 SAEKVRLAGNPNVMVCERGTMFGYNDLI---VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 223 (290)
Q Consensus 149 Ave~i~~~Gn~~i~L~~~gs~~~y~~~~---~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~ 223 (290)
.+.. ..+.+++.+. .+++.-.. -.+.-+..+|+ . +++|.+|..=+ +
T Consensus 130 ---~~l~--~~D~Vl~msv-~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-----------------------~ 180 (228)
T 3ovp_A 130 ---PWAN--QIDMALVMTV-EPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVG-----------------------P 180 (228)
T ss_dssp ---GGGG--GCSEEEEESS-CTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCS-----------------------T
T ss_pred ---HHhc--cCCeEEEeee-cCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcC-----------------------H
Confidence 2222 2345555443 22332221 12445677776 3 57887763221 2
Q ss_pred HHHHHHHHcCCCEEEEeeeC
Q 022892 224 CIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 224 ~~a~aAva~GA~G~~IEkH~ 243 (290)
..+..++.+|||++|+=+-+
T Consensus 181 ~t~~~~~~aGAd~~VvGsaI 200 (228)
T 3ovp_A 181 DTVHKCAEAGANMIVSGSAI 200 (228)
T ss_dssp TTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeHHH
Confidence 33556788899999888765
No 200
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=89.01 E-value=7.4 Score=34.56 Aligned_cols=116 Identities=22% Similarity=0.260 Sum_probs=67.0
Q ss_pred HHHHHHHhc---CCeEE-EeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEe
Q 022892 121 DLLVAAAKT---GKIIN-IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVAD 195 (290)
Q Consensus 121 ~lL~~~a~~---~~PVi-lstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D 195 (290)
.+++.+-+. ++.++ +.+. +.++++.+. ..|..-| +..+.-++......+...+..+++ .++||++.
T Consensus 114 ~~~~~a~~~~~~g~~vi~~~~~---~~~~a~~~~----~~gad~v--~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~ 184 (264)
T 1xm3_A 114 ETLKASEQLLEEGFIVLPYTSD---DVVLARKLE----ELGVHAI--MPGASPIGSGQGILNPLNLSFIIEQAKVPVIVD 184 (264)
T ss_dssp HHHHHHHHHHHTTCCEEEEECS---CHHHHHHHH----HHTCSCB--EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEE
T ss_pred HHHHHHHHHHCCCeEEEEEcCC---CHHHHHHHH----HhCCCEE--EECCcccCCCCCCCCHHHHHHHHhcCCCCEEEE
Confidence 566666666 87777 6654 566655543 3466545 333332222222224567777777 78999874
Q ss_pred CCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 022892 196 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 275 (290)
Q Consensus 196 ~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~l 275 (290)
.-=+ . +.-+..+.++||+|+++=+.+.-. .| ..+.+++|++.+++...+.
T Consensus 185 gGI~-----------------t-----~eda~~~~~~GAdgViVGSAi~~a---~d-----p~~~~~~l~~~v~~~~~~~ 234 (264)
T 1xm3_A 185 AGIG-----------------S-----PKDAAYAMELGADGVLLNTAVSGA---DD-----PVKMARAMKLAVEAGRLSY 234 (264)
T ss_dssp SCCC-----------------S-----HHHHHHHHHTTCSEEEESHHHHTS---SS-----HHHHHHHHHHHHHHHHHHH
T ss_pred eCCC-----------------C-----HHHHHHHHHcCCCEEEEcHHHhCC---CC-----HHHHHHHHHHHHHHHHHHH
Confidence 2111 1 344566788999999998876311 11 2245677777666655443
No 201
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=89.00 E-value=2.3 Score=39.01 Aligned_cols=92 Identities=13% Similarity=0.039 Sum_probs=60.8
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++ |...+++.+++..+ +|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 79 ~grvpViaGvg~--st~~ai~la~~A~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 79 NGRATVVAGIGY--SVDTAIELGKSAID----SGADCVMIH--------QPV-HPYIT-DAGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp TTSSEEEEEECS--SHHHHHHHHHHHHH----TTCSEEEEC--------CCC-CSCCC-HHHHHHHHHHHHHHSSSCEEE
T ss_pred CCCCeEEecCCc--CHHHHHHHHHHHHH----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 457889999997 77777777666554 799987653 122 22223 344 55677888999999875
Q ss_pred e----ecCcccHHHHhh--hcceecccCCccCCHH
Q 022892 93 D----VHETVQCEEVGK--VADIIQIPAFLCRQTD 121 (290)
Q Consensus 93 ~----~~d~~~~~~l~~--~~d~~kIgs~~~~n~~ 121 (290)
= +++++.+..|.+ .+-.+|-.+.++.+..
T Consensus 143 Yn~tg~l~~~~~~~La~~pnIvgiKdssgd~~~~~ 177 (314)
T 3d0c_A 143 YFKDAHLSDDVIKELAPLDKLVGIKYAINDIQRVT 177 (314)
T ss_dssp EECCTTSCTHHHHHHTTCTTEEEEEECCCCHHHHH
T ss_pred EeCCCCcCHHHHHHHHcCCCEEEEEeCCCCHHHHH
Confidence 1 255666666655 3557788888775543
No 202
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=88.75 E-value=13 Score=33.31 Aligned_cols=217 Identities=13% Similarity=0.118 Sum_probs=112.0
Q ss_pred HHhhhcCCCCeEEEE--ccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCccc-------------CCCCC
Q 022892 7 LFNQLKAAEPFFLLA--GPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKS-------------FRGPG 71 (290)
Q Consensus 7 ~~~~i~~~~~~~iIA--gpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~-------------~~g~~ 71 (290)
.|......++..+|. -+|.. +.+..++.++.|.+ . +|+|-.+. |.+.|.. -.|..
T Consensus 6 ~f~~~~~~~~~~li~~i~~GdP-~~~~~~~~~~~l~~----~-aD~IElG~----PfsdP~adGp~Iq~a~~~Al~~G~~ 75 (271)
T 1ujp_A 6 AFAKARSEGRAALIPYLTAGFP-SREGFLQAVEEVLP----Y-ADLLEIGL----PYSDPLGDGPVIQRASELALRKGMS 75 (271)
T ss_dssp HHHHHHHTTBCEEEEEEETTSS-CHHHHHHHHHHHGG----G-CSSEEEEC----CCCC----CHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCceEEEEecCCCC-ChHHHHHHHHHHHh----c-CCEEEECC----CCCCcccccHHHHHHHHHHHHcCCC
Confidence 666654333322222 34443 66777777766665 5 88887764 2222221 01233
Q ss_pred hhHHHHHHHHHHHhcCCcEEEee-cCc-------ccHHHHhh-hcceecccCCcc-CCHHHHHHHHhcCCe-EEEeCCCC
Q 022892 72 MVEGLKILEKVKIAYDIPIVTDV-HET-------VQCEEVGK-VADIIQIPAFLC-RQTDLLVAAAKTGKI-INIKKGQF 140 (290)
Q Consensus 72 ~~~~l~~L~~~~~~~Gi~~~s~~-~d~-------~~~~~l~~-~~d~~kIgs~~~-~n~~lL~~~a~~~~P-VilstG~~ 140 (290)
+...++.++++.++..+|++--. +++ ..++.+.+ .+|.+-++.-.. +-..+.+.+-+.+.+ |.|-+..+
T Consensus 76 ~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s 155 (271)
T 1ujp_A 76 VQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTS 155 (271)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCC
Confidence 34457778888888889988832 221 11222333 578666654433 344566666667764 55555555
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecC-CCCCCCC-CCC-chhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCC
Q 022892 141 CASSVMVNSAEKVRLAGNPNVMVCERGT-MFGYNDL-IVD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASG 216 (290)
Q Consensus 141 ~tl~e~~~Ave~i~~~Gn~~i~L~~~gs-~~~y~~~-~~d-L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~ 216 (290)
+.+.+...++ .+.. .+.+-..+ ..+.... .-+ ...+..+|+ .++||++-.- -+
T Consensus 156 -~~eri~~ia~----~~~g-fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfG----------------I~- 212 (271)
T 1ujp_A 156 -TDARIATVVR----HATG-FVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFG----------------VS- 212 (271)
T ss_dssp -CHHHHHHHHT----TCCS-CEEEECC------------CCHHHHHHHHTTCCSCEEEESC----------------CC-
T ss_pred -CHHHHHHHHH----hCCC-CEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcC----------------CC-
Confidence 6665554332 2332 33332111 0122111 112 356677888 7899876111 11
Q ss_pred CCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022892 217 GLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 271 (290)
Q Consensus 217 g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~ 271 (290)
. +..+.. + .||||+|+=+.++-.-. .+ +.++++++.+++.
T Consensus 213 t-----~e~a~~-~-~~ADgVIVGSAi~~~~~-~~-------~~~~~fv~~l~~~ 252 (271)
T 1ujp_A 213 G-----KATAAQ-A-AVADGVVVGSALVRALE-EG-------RSLAPLLQEIRQG 252 (271)
T ss_dssp S-----HHHHHH-H-TTSSEEEECHHHHHHHH-TT-------CCHHHHHHHHHHH
T ss_pred C-----HHHHHH-h-cCCCEEEEChHHhcccc-hH-------HHHHHHHHHHHHH
Confidence 1 344444 4 89999999877642110 01 3688888887654
No 203
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.68 E-value=3.8 Score=37.37 Aligned_cols=66 Identities=21% Similarity=0.235 Sum_probs=42.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCC-CCChhHHHHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFR-GPGMVEGLKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~-g~~~~~~l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.|++.. ++|+|++.-. .|+.|+ .+.-+.-+...+++++..++|++-
T Consensus 81 ~gr~pviaGvg~~-~t~~ai~la~~A~----~~Gadavlv~--------~P~y~~~~~s~~~l~~~f~~ia~a~~lPiil 147 (307)
T 3s5o_A 81 PKNRLLLAGSGCE-STQATVEMTVSMA----QVGADAAMVV--------TPCYYRGRMSSAALIHHYTKVADLSPIPVVL 147 (307)
T ss_dssp CTTSEEEEECCCS-SHHHHHHHHHHHH----HTTCSEEEEE--------CCCTTGGGCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHH----HcCCCEEEEc--------CCCcCCCCCCHHHHHHHHHHHHhhcCCCEEE
Confidence 4678899999874 6666666666554 4799997753 122122 122123455677888888999873
No 204
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=88.65 E-value=1.1 Score=41.06 Aligned_cols=73 Identities=10% Similarity=-0.025 Sum_probs=56.9
Q ss_pred HHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
+.++++++|+.+.+ +.+. +.+ .+|++-|....-.+.++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 52 ~~~~~~~~~~~~~~------~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~ 125 (354)
T 3q2i_A 52 LKAAVERTGARGHA------SLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA 125 (354)
T ss_dssp HHHHHHHHCCEEES------CHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCceeC------CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 45566778875432 3344 443 699999999999999998999999999999999999999988887765554
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 126 g 126 (354)
T 3q2i_A 126 K 126 (354)
T ss_dssp T
T ss_pred C
Confidence 4
No 205
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=88.40 E-value=1.6 Score=40.40 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=57.9
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|.+-.. .+.+.+ ++ .+|++-|.+-.-.+.++..++.+.||+|++.+.++.+++|....++..++
T Consensus 63 ~a~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 137 (361)
T 3u3x_A 63 LAAEFSAVYADARRI-----ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAE 137 (361)
T ss_dssp HHHHHHHHSSSCCEE-----SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 455677788843221 244444 43 59999999999999999999999999999999999999999988886655
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 138 ~g 139 (361)
T 3u3x_A 138 TG 139 (361)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 206
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.38 E-value=10 Score=34.62 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=41.4
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCC-CChhHH-HHHHHHHHHhcCCcEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRG-PGMVEG-LKILEKVKIAYDIPIV 91 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g-~~~~~~-l~~L~~~~~~~Gi~~~ 91 (290)
++++-||||.++. |...+++.+++..+ +|+|++.-. .|+.|.+ .. +++ +...+++++..++|++
T Consensus 78 ~grvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~y~~kp~~-~~~l~~~f~~ia~a~~lPii 143 (318)
T 3qfe_A 78 GPDFPIMAGVGAH-STRQVLEHINDASV----AGANYVLVL--------PPAYFGKATT-PPVIKSFFDDVSCQSPLPVV 143 (318)
T ss_dssp CTTSCEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCCC---CCC-HHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEeCCCC-CHHHHHHHHHHHHH----cCCCEEEEe--------CCcccCCCCC-HHHHHHHHHHHHhhCCCCEE
Confidence 4677899999874 66667777766655 699987653 2222322 22 344 5567788888888886
No 207
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=88.32 E-value=1.8 Score=39.44 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=58.8
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|+..- ++ .+.+.+ .+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 40 ~~~~~~~~~g~~~~--~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~ 115 (344)
T 3mz0_A 40 AAQKVVEQYQLNAT--VY--PNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIK 115 (344)
T ss_dssp HHHHHHHHTTCCCE--EE--SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCe--ee--CCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 45567788886211 11 234444 33 59999999999999999999999999999999999999999888887666
Q ss_pred cCC
Q 022892 156 AGN 158 (290)
Q Consensus 156 ~Gn 158 (290)
.|.
T Consensus 116 ~g~ 118 (344)
T 3mz0_A 116 VGK 118 (344)
T ss_dssp HSS
T ss_pred HCC
Confidence 553
No 208
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.24 E-value=14 Score=33.56 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=41.9
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcC--CcEE
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYD--IPIV 91 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~G--i~~~ 91 (290)
+++-||||.++. |...+++.|++..+ +|+|++.-. .|| |. .. +++ +.+.+++++..+ +|++
T Consensus 75 grvpViaGvg~~-~t~~ai~la~~A~~----~Gadavlv~--------~P~-~~-~s-~~~l~~~f~~va~a~~~~lPii 138 (313)
T 3dz1_A 75 KSMQVIVGVSAP-GFAAMRRLARLSMD----AGAAGVMIA--------PPP-SL-RT-DEQITTYFRQATEAIGDDVPWV 138 (313)
T ss_dssp TTSEEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCT-TC-CS-HHHHHHHHHHHHHHHCTTSCEE
T ss_pred CCCcEEEecCCC-CHHHHHHHHHHHHH----cCCCEEEEC--------CCC-CC-CC-HHHHHHHHHHHHHhCCCCCcEE
Confidence 577899999874 66667777766555 699998753 223 32 22 344 556778888888 9987
Q ss_pred E
Q 022892 92 T 92 (290)
Q Consensus 92 s 92 (290)
-
T Consensus 139 l 139 (313)
T 3dz1_A 139 L 139 (313)
T ss_dssp E
T ss_pred E
Confidence 4
No 209
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=88.17 E-value=4.1 Score=35.85 Aligned_cols=185 Identities=13% Similarity=0.108 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
-+++|++..+. |++-+...-.+.+ ..+- ..-+..+++.+++..+|+.. =+-+.++++.+-+ .++
T Consensus 33 P~~~a~~~~~~----gad~lhvvDld~a-------~~~~--~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~Gad 99 (243)
T 4gj1_A 33 PLKKFKEYEKA----GAKELHLVDLTGA-------KDPS--KRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVK 99 (243)
T ss_dssp HHHHHHHHHHH----TCCEEEEEEHHHH-------HCGG--GCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHC----CCCEEEEEecCcc-------cccc--hhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCC
Confidence 46788887774 8887665444421 0000 13367788889999998876 5677788887666 799
Q ss_pred eecccCCccCCHHHHHHHHh-cCC-eEE--Ee----CC-----------CCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 109 IIQIPAFLCRQTDLLVAAAK-TGK-IIN--IK----KG-----------QFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~~a~-~~~-PVi--ls----tG-----------~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
-+-|++....|..|++++++ .+. -++ +. ++ +..++.||. +.+...|-..++ +.+..+
T Consensus 100 kVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~---~~~~~~g~~eil-~t~Id~ 175 (243)
T 4gj1_A 100 RVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVL---DFYSNKGLKHIL-CTDISK 175 (243)
T ss_dssp EEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHH---HHHHTTTCCEEE-EEETTC
T ss_pred EEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHH---HHHhhcCCcEEE-eeeecc
Confidence 99999999999999988764 221 122 11 11 112344443 345566765544 444332
Q ss_pred CCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCC
Q 022892 170 FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 247 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dk 247 (290)
-+. ..=.|+..+..+.+ + ++||++- +|.+.. ..+. .+..+++|+++=+-+
T Consensus 176 DGt-~~G~d~~l~~~l~~~~~~ipvias--------------------GGv~~~-~Dl~--~l~~~~~gvivg~Al---- 227 (243)
T 4gj1_A 176 DGT-MQGVNVRLYKLIHEIFPNICIQAS--------------------GGVASL-KDLE--NLKGICSGVIVGKAL---- 227 (243)
T ss_dssp ------CCCHHHHHHHHHHCTTSEEEEE--------------------SCCCSH-HHHH--HTTTTCSEEEECHHH----
T ss_pred ccc-ccCCCHHHHHHHHHhcCCCCEEEE--------------------cCCCCH-HHHH--HHHccCchhehHHHH----
Confidence 111 01136677777876 4 7999871 122211 2222 234568898887766
Q ss_pred CCCCCCCCCChHHHHHHH
Q 022892 248 APVDGPTQWPLRNLEELL 265 (290)
Q Consensus 248 a~~D~~~sl~p~~l~~lv 265 (290)
|.-.++.+|..+.+
T Consensus 228 ----~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 228 ----LDGVFSVEEGIRCL 241 (243)
T ss_dssp ----HTTSSCHHHHHHHH
T ss_pred ----HCCCCCHHHHHHHh
Confidence 55667777765554
No 210
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=88.14 E-value=6.5 Score=34.82 Aligned_cols=162 Identities=17% Similarity=0.185 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecc
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQI 112 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kI 112 (290)
.+..+.|.+ +|+|++..+. . .|..++..++.++++.+ ..+|++-.+.....+ ...+|.+-|
T Consensus 23 ~~~~~~l~~----~GaD~ielG~-S----------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i---~~G~dg~ii 83 (240)
T 1viz_A 23 DEQLEILCE----SGTDAVIIGG-S----------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAI---VPGFDLYFI 83 (240)
T ss_dssp HHHHHHHHT----SCCSEEEECC---------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGC---CSCCSEEEE
T ss_pred HHHHHHHHH----cCCCEEEECC-C----------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccc---cCCCCEEEE
Confidence 444555544 7999998864 1 23334557777777766 899999888874333 447888888
Q ss_pred cCCccC-CHHH-----HHHHHhcC------CeEE----EeCCCC-----------CCHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 113 PAFLCR-QTDL-----LVAAAKTG------KIIN----IKKGQF-----------CASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 113 gs~~~~-n~~l-----L~~~a~~~------~PVi----lstG~~-----------~tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.--.. +..+ .+++-+.+ .+|. |-+..+ .+++.+...++.=.-.+ ..++-+.
T Consensus 84 PdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~-~~~VYl~ 162 (240)
T 1viz_A 84 PSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQ-LPIFYLE 162 (240)
T ss_dssp EEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTT-CSEEEEE
T ss_pred cccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccC-CCEEEEe
Confidence 876554 4444 35555545 3444 433332 12444443332111111 2344444
Q ss_pred ecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 166 RGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 166 ~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
. + +- ..|...+..+++ . ++||.+- + |.+. +..+..+.. ||+|+++=+-+
T Consensus 163 s-~--G~---~~~~~~i~~i~~~~~~~Pv~vG----------------g----GI~t--~e~a~~~~~-gAd~VIVGSa~ 213 (240)
T 1viz_A 163 Y-S--GV---LGDIEAVKKTKAVLETSTLFYG----------------G----GIKD--AETAKQYAE-HADVIVVGNAV 213 (240)
T ss_dssp C-T--TS---CCCHHHHHHHHHTCSSSEEEEE----------------S----SCCS--HHHHHHHHT-TCSEEEECTHH
T ss_pred C-C--Cc---cChHHHHHHHHHhcCCCCEEEE----------------e----ccCC--HHHHHHHHh-CCCEEEEChHH
Confidence 3 2 22 236778888888 7 8998771 1 2111 445555556 99999997765
No 211
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.13 E-value=6 Score=35.67 Aligned_cols=64 Identities=6% Similarity=0.087 Sum_probs=41.6
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++..+ +|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 71 ~grvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~-y~~~~-~~~l~~~f~~va~a~~lPiil 135 (293)
T 1f6k_A 71 KDQIALIAQVGSV-NLKEAVELGKYATE----LGYDCLSAV--------TPF-YYKFS-FPEIKHYYDTIIAETGSNMIV 135 (293)
T ss_dssp TTSSEEEEECCCS-CHHHHHHHHHHHHH----HTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHHCCCEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHHHHHHh----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 4578899999974 66666666665554 699987653 122 22222 344 55677788888888873
No 212
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=88.13 E-value=0.9 Score=44.34 Aligned_cols=118 Identities=13% Similarity=0.007 Sum_probs=68.3
Q ss_pred ccHHHHhh-hcceecccCCccCCH---HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----ee
Q 022892 98 VQCEEVGK-VADIIQIPAFLCRQT---DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ER 166 (290)
Q Consensus 98 ~~~~~l~~-~~d~~kIgs~~~~n~---~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-----~~ 166 (290)
+.++.+.+ .+|++.|.+..-... ++++++.+. +.||+..+.. |.++.+.+ ...|-+-|.+- +|
T Consensus 232 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~--t~e~a~~l----~~aGaD~I~vg~g~Gs~~ 305 (490)
T 4avf_A 232 ERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIA--TAEAAKAL----AEAGADAVKVGIGPGSIC 305 (490)
T ss_dssp HHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEEC--SHHHHHHH----HHTTCSEEEECSSCSTTC
T ss_pred HHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeC--cHHHHHHH----HHcCCCEEEECCCCCcCC
Confidence 34444444 588888876655444 566666553 6799995543 57766554 44676555541 33
Q ss_pred cCC--CCCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 167 GTM--FGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 167 gs~--~~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
++. .++. .-++..+..+.+ +++||+.|..=. . ..-+..|.++||+|+++=
T Consensus 306 ~t~~~~g~g--~p~~~~l~~v~~~~~~~~iPVIa~GGI~--------------------~--~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 306 TTRIVAGVG--VPQISAIANVAAALEGTGVPLIADGGIR--------------------F--SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp HHHHHTCBC--CCHHHHHHHHHHHHTTTTCCEEEESCCC--------------------S--HHHHHHHHHHTCSEEEEC
T ss_pred CccccCCCC--ccHHHHHHHHHHHhccCCCcEEEeCCCC--------------------C--HHHHHHHHHcCCCeeeec
Confidence 321 0111 124556666554 479998752211 0 222345688899999998
Q ss_pred eeCCC
Q 022892 241 VHDDP 245 (290)
Q Consensus 241 kH~t~ 245 (290)
+-|.-
T Consensus 362 s~~~~ 366 (490)
T 4avf_A 362 SMFAG 366 (490)
T ss_dssp TTTTT
T ss_pred HHHhc
Confidence 77654
No 213
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=88.12 E-value=4.1 Score=40.30 Aligned_cols=188 Identities=15% Similarity=0.115 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCC-hhHHHHHHHHHHHhcCCcEEE--eecCccc--------
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPG-MVEGLKILEKVKIAYDIPIVT--DVHETVQ-------- 99 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~-~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~-------- 99 (290)
.-.++|++..+ .|++.+.+--.+. -+ .+.. -...++.+++++++..+|+.. -+-+.++
T Consensus 281 dp~~~A~~~~~----~Ga~~l~~~dl~~-~~------~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~ 349 (555)
T 1jvn_A 281 KPVQLAQKYYQ----QGADEVTFLNITS-FR------DCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPA 349 (555)
T ss_dssp HHHHHHHHHHH----TTCSEEEEEEEC----------CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECH
T ss_pred CHHHHHHHHHH----cCCCEEEEEeCCc-cc------cccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchH
Confidence 34667776665 5998776644431 01 1110 024578889999989999873 3444433
Q ss_pred ---HHHHhh-hcceecccCCccC-------------CHHHHHHHHhc-CC-eEEEeCCC---------------------
Q 022892 100 ---CEEVGK-VADIIQIPAFLCR-------------QTDLLVAAAKT-GK-IINIKKGQ--------------------- 139 (290)
Q Consensus 100 ---~~~l~~-~~d~~kIgs~~~~-------------n~~lL~~~a~~-~~-PVilstG~--------------------- 139 (290)
++.+.+ .+|.+.||+.... |.++++++++. |. -|+++-..
T Consensus 350 ~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~ 429 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYP 429 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSC
T ss_pred HHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEcccccccccccccccccccccc
Confidence 555544 7999999998765 46888887653 41 23333221
Q ss_pred --CC-------------------CHHHHHHHHHHHHHcCCCcEEEEeecCCCC-CCCCCCCchhHHHHHh-cCCCEEEeC
Q 022892 140 --FC-------------------ASSVMVNSAEKVRLAGNPNVMVCERGTMFG-YNDLIVDPRNLEWMRE-ANCPVVADV 196 (290)
Q Consensus 140 --~~-------------------tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~-y~~~~~dL~~i~~lk~-~~~pV~~D~ 196 (290)
.+ +..|+. +.+...|-..| |+|..+.-+ +. -.|+..+..+++ .++||+...
T Consensus 430 ~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a---~~~~~~Ga~~i-l~t~~~~dG~~~--G~d~~li~~l~~~~~iPVIasG 503 (555)
T 1jvn_A 430 GPNGEKYCWYQCTIKGGRESRDLGVWELT---RACEALGAGEI-LLNCIDKDGSNS--GYDLELIEHVKDAVKIPVIASS 503 (555)
T ss_dssp CTTCCCEEEEEEEETTTTEEEEEEHHHHH---HHHHHTTCCEE-EECCGGGTTTCS--CCCHHHHHHHHHHCSSCEEECS
T ss_pred CCCCCcceeEEEEEecCccCCCCCHHHHH---HHHHHcCCCEE-EEeCCCCCCCCC--CCCHHHHHHHHHhCCccEEEEC
Confidence 11 123333 33456676555 566544322 22 147788888888 799998721
Q ss_pred CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH-cCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHH
Q 022892 197 THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA-VGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 265 (290)
Q Consensus 197 sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva-~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv 265 (290)
.-+ . +.-...+.. .|++|+++=+-+ +...++..++++++
T Consensus 504 Gi~-----------------s-----~~d~~~~~~~~G~~gvivg~a~--------~~~~~~~~e~~~~l 543 (555)
T 1jvn_A 504 GAG-----------------V-----PEHFEEAFLKTRADACLGAGMF--------HRGEFTVNDVKEYL 543 (555)
T ss_dssp CCC-----------------S-----HHHHHHHHHHSCCSEEEESHHH--------HTTSCCHHHHHHHH
T ss_pred CCC-----------------C-----HHHHHHHHHhcCChHHHHHHHH--------HcCCCCHHHHHHHH
Confidence 111 1 222334444 799999998865 33455666666553
No 214
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=87.99 E-value=7.1 Score=37.71 Aligned_cols=167 Identities=16% Similarity=0.074 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
.+-+.|+++.++-+..++-.+||+-++..+.+ ..+.+.+.+..+... ...+..|.|=+ |.. +++|+.+.++.
T Consensus 48 ~~a~~lr~Ll~~~~~l~~~ga~D~~sA~~~~~aGf~Aiy~SG~~vAa~---~~~~~~G~PD~---~~~-~~~ev~~~v~r 120 (433)
T 3eol_A 48 MGANRLWKLIHEEDFVNALGALSGNQAMQMVRAGLKAIYLSGWQVAAD---ANTASAMYPDQ---SLY-PANAGPELAKR 120 (433)
T ss_dssp HHHHHHHHHHHHSSCEEEEBCSSHHHHHHHHHTTCCCEEEC------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHhccCCCEEeCCCCcHHHHHHHHHhCCCEEEechHHHHhc---cchhcCCCCCC---ccC-CHHHHHHHHHH
Confidence 34567888888888889999999999999988 699999999887652 11123455522 333 67777776665
Q ss_pred HHHcC--CCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 022892 153 VRLAG--NPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 230 (290)
Q Consensus 153 i~~~G--n~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAv 230 (290)
|...- .+++...+ +.. .+ .+| +.+||++|.+.+- |...-+....+..+
T Consensus 121 I~~a~~~~d~~~~~~-~~~--~~--~~d---------~~lPIiaD~DtGf----------------G~~~nv~rtVk~~~ 170 (433)
T 3eol_A 121 INRTLQRADQIETAE-GKG--LS--VDT---------WFAPIVADAEAGF----------------GDPLDAFEIMKAYI 170 (433)
T ss_dssp HHHHHHHHHHHHHHT-TSC--CS--SSC---------SCCCEEEECC-------------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhh-ccc--cc--ccC---------CCCCeEEECCCCC----------------CCcHHHHHHHHHHH
Confidence 53210 00000000 110 01 011 4689999999874 32223445556668
Q ss_pred HcCCCEEEEeeeCC-CCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 231 AVGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 231 a~GA~G~~IEkH~t-~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
.+||.|+-||-... |.|-- -+++.-.+.+|+-+=++..+.....+|.
T Consensus 171 ~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~ 219 (433)
T 3eol_A 171 EAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGT 219 (433)
T ss_dssp HHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred HcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC
Confidence 89999999997753 43321 1444455666655555555555554554
No 215
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=87.97 E-value=1.7 Score=42.39 Aligned_cols=116 Identities=16% Similarity=-0.008 Sum_probs=67.4
Q ss_pred cHHHHhh-hcceecccCCccCCH---HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----eec
Q 022892 99 QCEEVGK-VADIIQIPAFLCRQT---DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ERG 167 (290)
Q Consensus 99 ~~~~l~~-~~d~~kIgs~~~~n~---~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-----~~g 167 (290)
.++.+.+ .+|++.|.+..-... ++++++.+. +.||+..+.. +.++.+.++ ..|-+-|.+- +|+
T Consensus 235 ~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~--t~e~a~~l~----~aGaD~I~Vg~g~Gs~~~ 308 (496)
T 4fxs_A 235 RVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA--TAEGARALI----EAGVSAVKVGIGPGSICT 308 (496)
T ss_dssp HHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEEC--SHHHHHHHH----HHTCSEEEECSSCCTTBC
T ss_pred HHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccC--cHHHHHHHH----HhCCCEEEECCCCCcCcc
Confidence 3444444 688888877655433 566666554 7899995543 577766554 4576544432 444
Q ss_pred CCC--CCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEee
Q 022892 168 TMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEV 241 (290)
Q Consensus 168 s~~--~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEk 241 (290)
+.. ++.. -++.++..+.+ +++||+.|..=. . +.-+..|.++||+|+++=+
T Consensus 309 tr~~~g~g~--p~~~~i~~v~~~~~~~~iPVIa~GGI~----------------~------~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 309 TRIVTGVGV--PQITAIADAAGVANEYGIPVIADGGIR----------------F------SGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp HHHHHCCCC--CHHHHHHHHHHHHGGGTCCEEEESCCC----------------S------HHHHHHHHHTTCSEEEEST
T ss_pred cccccCCCc--cHHHHHHHHHHHhccCCCeEEEeCCCC----------------C------HHHHHHHHHcCCCeEEecH
Confidence 320 1111 24555555543 489998752211 1 2223456889999999987
Q ss_pred eCC
Q 022892 242 HDD 244 (290)
Q Consensus 242 H~t 244 (290)
-|.
T Consensus 365 ~f~ 367 (496)
T 4fxs_A 365 MFA 367 (496)
T ss_dssp TTT
T ss_pred HHh
Confidence 664
No 216
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=87.95 E-value=1.6 Score=43.47 Aligned_cols=109 Identities=16% Similarity=0.142 Sum_probs=78.6
Q ss_pred HHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC--CcEEEeecCcccHHHHhh---hcceecccC
Q 022892 40 KSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD--IPIVTDVHETVQCEEVGK---VADIIQIPA 114 (290)
Q Consensus 40 ~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G--i~~~s~~~d~~~~~~l~~---~~d~~kIgs 114 (290)
++.+.+.|+|.|....-.. .+.+.+++++..+.| +.+++-+-.++.++-+++ ..|.+-||-
T Consensus 248 l~f~~~~~vD~ia~SfVr~--------------a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaR 313 (550)
T 3gr4_A 248 LKFGVEQDVDMVFASFIRK--------------ASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVAR 313 (550)
T ss_dssp HHHHHHTTCSEEEETTCCS--------------HHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEH
T ss_pred HHHHHHcCCCEEEecCCCC--------------HHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEcc
Confidence 3455667999998653321 477888999887765 889999999988776666 478888887
Q ss_pred Ccc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEE
Q 022892 115 FLC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 115 ~~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+|+ -|-.+++.+-+.||||+.-|-|- .|-.|+-..+..+.. |-+-++|
T Consensus 314 GDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvld-G~DavML 380 (550)
T 3gr4_A 314 GDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLD-GADCIML 380 (550)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEE
T ss_pred chhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHc-CCcEEEE
Confidence 776 34456677778899999765552 367888887777653 5554555
No 217
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=87.93 E-value=7.8 Score=36.31 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=67.4
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHH----------------------HHHHHcCCCcEEEEeecCCCCC------
Q 022892 121 DLLVAAAKTGKIINIKKGQFCASSVMVNSA----------------------EKVRLAGNPNVMVCERGTMFGY------ 172 (290)
Q Consensus 121 ~lL~~~a~~~~PVilstG~~~tl~e~~~Av----------------------e~i~~~Gn~~i~L~~~gs~~~y------ 172 (290)
.+-+++++.|.|.++||..+.++||+..+. +..+..|..-++|.--....+.
T Consensus 90 ~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r 169 (352)
T 3sgz_A 90 STARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKR 169 (352)
T ss_dssp HHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHH
T ss_pred HHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhh
Confidence 566888899999999999888999998874 2344556655555432211100
Q ss_pred ------------------------------CCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCccc
Q 022892 173 ------------------------------NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLREL 221 (290)
Q Consensus 173 ------------------------------~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~ 221 (290)
-+..++...+.++++ .++||++=-.. .
T Consensus 170 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~------------------~---- 227 (352)
T 3sgz_A 170 NQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGIL------------------T---- 227 (352)
T ss_dssp HHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEEC------------------S----
T ss_pred cCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecC------------------c----
Confidence 012344567888888 78998771111 1
Q ss_pred HHHHHHHHHHcCCCEEEEeeeC
Q 022892 222 IPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 222 ~~~~a~aAva~GA~G~~IEkH~ 243 (290)
...++.++..|+||+++--|-
T Consensus 228 -~e~A~~a~~~GaD~I~vsn~G 248 (352)
T 3sgz_A 228 -KEDAELAMKHNVQGIVVSNHG 248 (352)
T ss_dssp -HHHHHHHHHTTCSEEEECCGG
T ss_pred -HHHHHHHHHcCCCEEEEeCCC
Confidence 567888999999999987773
No 218
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=87.88 E-value=14 Score=32.70 Aligned_cols=169 Identities=12% Similarity=0.098 Sum_probs=95.7
Q ss_pred HHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCcc-CCHHH
Q 022892 44 TKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLC-RQTDL 122 (290)
Q Consensus 44 ~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~-~n~~l 122 (290)
.++|.|++.-+.= .|...+.-++.++++.+ ..+|++-.|.+++++ ...+|.+-+++=.. +|..+
T Consensus 33 ~~~GtDaI~vGgs-----------~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~---~~gaD~il~pslln~~~~~~ 97 (235)
T 3w01_A 33 CMSQTDAIMIGGT-----------DDVTEDNVIHLMSKIRR-YPLPLVLEISNIESV---MPGFDFYFVPTVLNSTDVAF 97 (235)
T ss_dssp HTSSCSEEEECCS-----------SCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTC---CTTCSEEEEEEETTBSSGGG
T ss_pred HHcCCCEEEECCc-----------CCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHh---hcCCCEEEEccccCCCCcch
Confidence 3579999988641 12222334444555544 999999999998665 55789888887544 34444
Q ss_pred -----HHHHHhcCC------eEE----EeCCCCCCHHH---------HHHHHHHHHH----cCCCcEEEEeecCCCCCCC
Q 022892 123 -----LVAAAKTGK------IIN----IKKGQFCASSV---------MVNSAEKVRL----AGNPNVMVCERGTMFGYND 174 (290)
Q Consensus 123 -----L~~~a~~~~------PVi----lstG~~~tl~e---------~~~Ave~i~~----~Gn~~i~L~~~gs~~~y~~ 174 (290)
++.+.+.|. +|. +=++.+ +.+. .+.++.+.+. -|- .++=++. + +-+
T Consensus 98 i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s-~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~-~~vY~e~-s--G~~- 171 (235)
T 3w01_A 98 HNGTLLEALKTYGHSIDFEEVIFEGYVVCNADS-KVAKHTKANTDLTTEDLEAYAQMVNHMYRL-PVMYIEY-S--GIY- 171 (235)
T ss_dssp TTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSS-HHHHHTTBCCCCCHHHHHHHHHHHHHTTCC-SEEEEEC-T--TSC-
T ss_pred hhhHHHHHHHHcCCCCcccceeeeeEEEECCCC-ChhhcccCCcCCCHHHHHHHHHHHHHHcCC-CEEEEec-C--CCc-
Confidence 345666664 333 234433 3331 4444444321 133 3444444 3 111
Q ss_pred CCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCC
Q 022892 175 LIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDG 252 (290)
Q Consensus 175 ~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~ 252 (290)
.+...+..+|+ + ++||++- + |.+. +..+..+.. ||||+|+=+-++-
T Consensus 172 --g~~~~v~~ir~~~~~~pv~vG-----------------f---GI~~--~e~a~~~~~-gAD~VVVGSai~~------- 219 (235)
T 3w01_A 172 --GDVSKVQAVSEHLTETQLFYG-----------------G---GISS--EQQATEMAA-IADTIIVGDIIYK------- 219 (235)
T ss_dssp --CCHHHHHHHHTTCSSSEEEEE-----------------S---CCCS--HHHHHHHHT-TSSEEEECTHHHH-------
T ss_pred --CCHHHHHHHHHhcCCCCEEEE-----------------C---CcCC--HHHHHHHHc-CCCEEEECCceec-------
Confidence 26778888888 6 7898761 1 1111 445555444 9999999877632
Q ss_pred CCCCChHHHHHHHHHHH
Q 022892 253 PTQWPLRNLEELLEELV 269 (290)
Q Consensus 253 ~~sl~p~~l~~lv~~ir 269 (290)
+|+.++++++.++
T Consensus 220 ----~~~~~~e~v~~v~ 232 (235)
T 3w01_A 220 ----DIKKALKTVKIKE 232 (235)
T ss_dssp ----CHHHHHHTTCC--
T ss_pred ----CHHHHHHHHHHHh
Confidence 3666666655443
No 219
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.81 E-value=4.6 Score=36.73 Aligned_cols=72 Identities=15% Similarity=0.040 Sum_probs=53.7
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCC---------ccCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHH
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAF---------LCRQTDLLVAAAK-TGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~---------~~~n~~lL~~~a~-~~~PVilstG~~~tl~e~~ 147 (290)
+.+.+++.|++++..+.+++.+..+.+ .+|++.+-+. ...+..+++++.+ .+.||+..-|.. +.+++.
T Consensus 110 ~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~-~~~~v~ 188 (328)
T 2gjl_A 110 HIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFA-DGRGLV 188 (328)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCC-SHHHHH
T ss_pred HHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCC-CHHHHH
Confidence 334456679999999888887777666 6998888221 2356678888764 589999999998 899888
Q ss_pred HHHH
Q 022892 148 NSAE 151 (290)
Q Consensus 148 ~Ave 151 (290)
.++.
T Consensus 189 ~al~ 192 (328)
T 2gjl_A 189 AALA 192 (328)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 220
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=87.81 E-value=2.7 Score=38.25 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=57.5
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
..+++++++|++-.. .+.+.+ .+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 39 ~~~~~~~~~~~~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 39 RLREMKEKLGVEKAY-----KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp HHHHHHHHHTCSEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcee-----CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 345566778886222 233444 43 69999999999888999899999999999999999999998888776655
Q ss_pred cC
Q 022892 156 AG 157 (290)
Q Consensus 156 ~G 157 (290)
.|
T Consensus 114 ~g 115 (344)
T 3ezy_A 114 AD 115 (344)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 221
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.74 E-value=3.4 Score=37.46 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=54.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++.. ++|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 74 ~grvpviaGvg~~-~t~~ai~la~~a~----~~Gadavlv~--------~P~-y~~~~-~~~l~~~f~~va~a~~lPiil 138 (297)
T 3flu_A 74 AKRVPVIAGTGAN-NTVEAIALSQAAE----KAGADYTLSV--------VPY-YNKPS-QEGIYQHFKTIAEATSIPMII 138 (297)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHHHHH----HTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCcEEEeCCCc-CHHHHHHHHHHHH----HcCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 4567899999874 6666666666554 4799987653 122 21222 344 55677888888999984
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|.+ .+-.+|-.+.++.++
T Consensus 139 Yn~P~~tg~~l~~~~~~~La~~pnivgiKdssgd~~~~ 176 (297)
T 3flu_A 139 YNVPGRTVVSMTNDTILRLAEIPNIVGVKEASGNIGSN 176 (297)
T ss_dssp EECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCCHHHH
T ss_pred EECCchhccCCCHHHHHHHHcCCCEEEEEeCCCCHHHH
Confidence 2 233333444433 244556555555443
No 222
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=87.72 E-value=6.5 Score=35.92 Aligned_cols=178 Identities=15% Similarity=0.134 Sum_probs=101.8
Q ss_pred eEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHH-HhcCCcEEE-ee
Q 022892 17 FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVK-IAYDIPIVT-DV 94 (290)
Q Consensus 17 ~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~-~~~Gi~~~s-~~ 94 (290)
+.++--|--. +.+...+.++++. +.|.|+|+-.+.. ..+| ++.+..+.+.+ +.++||++- +|
T Consensus 41 ~~~liDPdK~-~~~~~~~~~~~~~----~sGtDai~VGS~~------vt~~-----~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 41 PVHIIDPFKV-PVTEAVEKAAELT----RLGFAAVLLASTD------YESF-----ESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp EEEEECTTTS-CHHHHHHHHHHHH----HTTCSCEEEECSC------CSSH-----HHHHHHHHHHHHHHCSSCEEEECC
T ss_pred ceEEECCCCC-CcHHHHHHHHHHH----hcCCCEEEEccCC------CCcc-----hHHHHHHHHHHHHhCCCCEEEECC
Confidence 4555566542 4444445555554 4799999886221 1112 24455544444 449999999 99
Q ss_pred ---cCcccHHHHhhhcceecccCCcc-CCHHHHHHH-----H---------hcCCe-----EEEeCC---------CCC-
Q 022892 95 ---HETVQCEEVGKVADIIQIPAFLC-RQTDLLVAA-----A---------KTGKI-----INIKKG---------QFC- 141 (290)
Q Consensus 95 ---~d~~~~~~l~~~~d~~kIgs~~~-~n~~lL~~~-----a---------~~~~P-----VilstG---------~~~- 141 (290)
-+..++ ...+|++-++|=.- +|...+-.. + +.+.+ ++++.| ...
T Consensus 105 P~~g~~~~i---~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~ 181 (286)
T 3vk5_A 105 PRPGAGFPV---VRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVS 181 (286)
T ss_dssp CBTTTBSCC---CTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCC
T ss_pred CCCCCcccc---ccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCC
Confidence 777655 45788888887644 454433211 1 22211 345655 111
Q ss_pred CHHHHHHHHHHHH---HcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccC
Q 022892 142 ASSVMVNSAEKVR---LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVAS 215 (290)
Q Consensus 142 tl~e~~~Ave~i~---~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~ 215 (290)
++ |+.....|-+ ..| -+++-++-+. ..+|+..+..+++ . ++||.+-
T Consensus 182 ~~-e~A~~~aYa~~gad~G-~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vG-------------------- 233 (286)
T 3vk5_A 182 TA-STEEIDRYLHVARAFG-FHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVS-------------------- 233 (286)
T ss_dssp CS-SSHHHHHHHHHHHHTT-CSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEE--------------------
T ss_pred CH-HHHHHHHHHHHHHHcC-CCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEE--------------------
Confidence 22 3331122222 223 3788888433 2367788888888 7 8998771
Q ss_pred CCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 216 GGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 216 ~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+|.|. ...+..+..+|||++++=+-+
T Consensus 234 GGIrs--~Eda~~ll~aGAD~VVVGSAa 259 (286)
T 3vk5_A 234 GNVRS--GRQVTEYLDSGADYVGFAGAL 259 (286)
T ss_dssp SSCCS--HHHHHHHHHTTCSEEEESGGG
T ss_pred eCCCC--HHHHHHHHHcCCCEEEECchh
Confidence 12221 445667788999999998876
No 223
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=87.70 E-value=3.9 Score=39.64 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh---cceecccCCc--cCCHHHHHHHHh--cCCeEEEeCCCCCCHHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV---ADIIQIPAFL--CRQTDLLVAAAK--TGKIINIKKGQFCASSV 145 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~---~d~~kIgs~~--~~n~~lL~~~a~--~~~PVilstG~~~tl~e 145 (290)
++-+..+++.+++++|.++=+|+++++.+-...+ +.-++|-+.+ ++|...++.+-. .---|++|-++.+++.|
T Consensus 282 ~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITE 361 (441)
T 3qtp_A 282 DGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTE 361 (441)
T ss_dssp HHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHH
T ss_pred HHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHH
Confidence 3556677888999999999999999998876653 3213333433 467776666533 33468889998889999
Q ss_pred HHHHHHHHHHcCCCcEEEEeec
Q 022892 146 MVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 146 ~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
+.+++...++.| -.+++-||.
T Consensus 362 alkaa~lA~~~G-~~vmvsHrs 382 (441)
T 3qtp_A 362 TFKTIKMAQEKG-WGVMASHRS 382 (441)
T ss_dssp HHHHHHHHHHTT-CEEEEECCS
T ss_pred HHHHHHHHHHcC-CeEEEeCCC
Confidence 999988877765 356666764
No 224
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=87.64 E-value=4.6 Score=37.17 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHcC--CCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEEe-ecCcccHHHHhh-
Q 022892 31 HIMRMAKHIKSISTKVG--LPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVTD-VHETVQCEEVGK- 105 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G--~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s~-~~d~~~~~~l~~- 105 (290)
..++.++.+.+ .| ++++-...- ++.. ...++.++++++.. +++++.- +.+++.+..+.+
T Consensus 106 ~~~~~a~~~~~----~g~~~~~i~i~~~-----------~G~~-~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~a 169 (336)
T 1ypf_A 106 DEYEFVQQLAA----EHLTPEYITIDIA-----------HGHS-NAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENA 169 (336)
T ss_dssp HHHHHHHHHHH----TTCCCSEEEEECS-----------SCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHh----cCCCCCEEEEECC-----------CCCc-HHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc
Confidence 35677777766 47 777643210 1111 35567777777777 4667765 888888888887
Q ss_pred hcceecccC---CccC------------CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 106 VADIIQIPA---FLCR------------QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 106 ~~d~~kIgs---~~~~------------n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+|++.++. +.+. ...+|.++.+ .+.||+.+-|.. +..++..|+.
T Consensus 170 Gad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~-~g~Dv~kala 230 (336)
T 1ypf_A 170 GADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIR-TNGDVAKSIR 230 (336)
T ss_dssp TCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCC-STHHHHHHHH
T ss_pred CCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCC-CHHHHHHHHH
Confidence 699999932 2221 4566666654 489999999999 9999998864
No 225
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.58 E-value=4 Score=38.41 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcCCcEEEe-e---cCcccHHHHhh-hcceecccCC---cc-------------------CCHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTD-V---HETVQCEEVGK-VADIIQIPAF---LC-------------------RQTDLLVAA 126 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~-~---~d~~~~~~l~~-~~d~~kIgs~---~~-------------------~n~~lL~~~ 126 (290)
.+++.++++++..++|++.- + .+++.+..+.+ .+|++.|+.. .. .....|..+
T Consensus 193 ~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v 272 (365)
T 3sr7_A 193 SWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNA 272 (365)
T ss_dssp HHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHH
Confidence 45678888889999999996 6 67888888877 6999988543 11 112344555
Q ss_pred Hhc--CCeEEEeCCCCCCHHHHHHHHH
Q 022892 127 AKT--GKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 127 a~~--~~PVilstG~~~tl~e~~~Ave 151 (290)
... ..||+.+-|.. +..++..|+.
T Consensus 273 ~~~~~~ipvia~GGI~-~g~Dv~KaLa 298 (365)
T 3sr7_A 273 QPLMDKVEILASGGIR-HPLDIIKALV 298 (365)
T ss_dssp GGGTTTSEEEECSSCC-SHHHHHHHHH
T ss_pred HHhcCCCeEEEeCCCC-CHHHHHHHHH
Confidence 544 67999999998 9999888764
No 226
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=87.53 E-value=7.8 Score=35.67 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCC----C--CCCC-CCCC--chhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTM----F--GYND-LIVD--PRNLEWMREANCPVVADVTHSLQQPAGKKLDGGG 212 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~----~--~y~~-~~~d--L~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~ 212 (290)
+.++++.|++.+...|.+.+.+.-..|. + +... +.++ ...+...|+.++.|.|++-..-
T Consensus 79 ~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~------------ 146 (325)
T 3eeg_A 79 KEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAG------------ 146 (325)
T ss_dssp CHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGG------------
T ss_pred CHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccc------------
Confidence 7889999999888778778887766652 1 1111 2222 1334445556777877544320
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022892 213 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 271 (290)
Q Consensus 213 ~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~ 271 (290)
.-..+++..++.++..+|++-+ - ++|-.-.+.|.++.++++.+++.
T Consensus 147 ---~~~~~~~~~~~~~~~~~G~~~i----~------l~DT~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 147 ---RADQAFLARMVEAVIEAGADVV----N------IPDTTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp ---GSCHHHHHHHHHHHHHHTCSEE----E------CCBSSSCCCHHHHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHHHhcCCCEE----E------ecCccCCcCHHHHHHHHHHHHHh
Confidence 0124667778888889999822 2 37888899999999999988764
No 227
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=87.44 E-value=1.4 Score=41.33 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCC----HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQ----TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n----~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
+..+++++++|+++.++.- .+.+.+|+.-|...+-.+ .++.+++-+.||+|++.+.+ |++|+..-++.
T Consensus 43 ~~a~~~a~~~gv~~~~~~~------~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl--~~~ea~~l~~~ 114 (372)
T 4gmf_A 43 ARSRELAHAFGIPLYTSPE------QITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPL--HPDDISSLQTL 114 (372)
T ss_dssp HHHHHHHHHTTCCEESSGG------GCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEECCHH------HHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCC--CHHHHHHHHHH
Confidence 4567788999999765432 233458888888777666 78888888899999999995 78998888876
Q ss_pred HHHcC
Q 022892 153 VRLAG 157 (290)
Q Consensus 153 i~~~G 157 (290)
.++.|
T Consensus 115 A~~~g 119 (372)
T 4gmf_A 115 AQEQG 119 (372)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 66655
No 228
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=87.44 E-value=14 Score=32.32 Aligned_cols=179 Identities=13% Similarity=0.164 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCccc---------H
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQ---------C 100 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~---------~ 100 (290)
....++++.+.......+++.++...|. .|..+++..++++..-=.|+.+ +
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~--------------------~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis~ 78 (226)
T 1w0m_A 19 KRAVELAKAAERAARELGVNIVVAPNHL--------------------ELGLVSQSVDIPVYAQGADVEAGGAHTAHVSL 78 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECCGG--------------------GHHHHHTTCSSCBEESCCSBSSCSSCTTCCBH
T ss_pred HHHHHHHHHHHhcccccCCcEEEeCCHH--------------------HHHHHHHhcCCceEeeECChhhCCCccCCCCH
Confidence 5678888888765444455555544332 2333444458999997788888 9
Q ss_pred HHHhh-hcceecccCCc--cCCH---HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC-
Q 022892 101 EEVGK-VADIIQIPAFL--CRQT---DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN- 173 (290)
Q Consensus 101 ~~l~~-~~d~~kIgs~~--~~n~---~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~- 173 (290)
..+.+ .++++-||-.+ ...- .+++.+-+.|+-+++.-|- ..|...+ ...+ +.++-++-.-.-+..
T Consensus 79 ~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge---~~e~~~~----~~~~-~~iIayep~waiGtG~ 150 (226)
T 1w0m_A 79 ENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPD---PRTSLAA----AALG-PHAVAVEPPELIGTGR 150 (226)
T ss_dssp HHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESS---HHHHHHH----HHTC-CSEEEECCGGGTTTSC
T ss_pred HHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHH----hcCC-CCEEEEcChhhhccCC
Confidence 99988 69999999987 4322 3445566789999999994 4444433 2223 346655533211111
Q ss_pred ---CCCCC-chhHH-HHHh--cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCC
Q 022892 174 ---DLIVD-PRNLE-WMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPL 246 (290)
Q Consensus 174 ---~~~~d-L~~i~-~lk~--~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~d 246 (290)
+.+.| +.... .+++ .+++|++-++-. . ..........|+||++|=.-
T Consensus 151 ~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~-----------------~-----~n~~~~~~~~giDG~LVG~a---- 204 (226)
T 1w0m_A 151 AVSRYKPEAIVETVGLVSRHFPEVSVITGAGIE-----------------S-----GDDVAAALRLGTRGVLLASA---- 204 (226)
T ss_dssp CHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCC-----------------S-----HHHHHHHHHTTCSEEEECHH----
T ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCC-----------------c-----HHHHHHHHhCCCCEEEECHH----
Confidence 11223 22222 2344 256777744332 1 23344456779999988544
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHH
Q 022892 247 NAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 247 ka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
+|.+++|.++++.+..
T Consensus 205 --------~l~a~~~~~~i~~l~~ 220 (226)
T 1w0m_A 205 --------AVKAKDPYAKIVELAK 220 (226)
T ss_dssp --------HHTCSSHHHHHHHHHH
T ss_pred --------HHCCcCHHHHHHHHHH
Confidence 5666677777766544
No 229
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=87.38 E-value=3 Score=37.69 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=57.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.|++ |+++|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 67 ~gr~pviaGvg~~-~t~~ai~la~~----A~~~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~ia~a~~lPiil 131 (292)
T 2vc6_A 67 NGRVPVIAGAGSN-STAEAIAFVRH----AQNAGADGVLIV--------SPY-YNKPT-QEGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp TTSSCBEEECCCS-SHHHHHHHHHH----HHHTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEecCCc-cHHHHHHHHHH----HHHcCCCEEEEc--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 3567799999973 55555555555 455799987653 122 22222 344 55677888999999986
Q ss_pred ------e--ecCcccHHHHhh-h--cceecccCCccCCHH
Q 022892 93 ------D--VHETVQCEEVGK-V--ADIIQIPAFLCRQTD 121 (290)
Q Consensus 93 ------~--~~d~~~~~~l~~-~--~d~~kIgs~~~~n~~ 121 (290)
+ .++++.+..|.+ . +-.+|-.+.++.+..
T Consensus 132 Yn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~gd~~~~~ 171 (292)
T 2vc6_A 132 YNIPGRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPS 171 (292)
T ss_dssp EECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHH
T ss_pred EeCccccCcCCCHHHHHHHHhhCCCEEEEecCCCCHHHHH
Confidence 2 244555555544 2 556777777766554
No 230
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=87.21 E-value=9.1 Score=34.48 Aligned_cols=64 Identities=17% Similarity=0.303 Sum_probs=41.8
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.|++..+ +|+|++.-. .|+ |..+. +++ +.+.+++++..++|++-
T Consensus 69 ~grvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~-y~~~~-~~~l~~~f~~ia~a~~lPiil 133 (292)
T 3daq_A 69 DKRVPVIAGTGTN-DTEKSIQASIQAKA----LGADAIMLI--------TPY-YNKTN-QRGLVKHFEAIADAVKLPVVL 133 (292)
T ss_dssp TTSSCEEEECCCS-CHHHHHHHHHHHHH----HTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHHCSCEEE
T ss_pred CCCCcEEEeCCcc-cHHHHHHHHHHHHH----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 4677899999863 66666776666555 699987653 122 21222 344 55677888888999883
No 231
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=87.00 E-value=2.1 Score=38.91 Aligned_cols=70 Identities=20% Similarity=0.088 Sum_probs=54.9
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHhh--hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVGK--VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~~--~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
+.+.++++|..+. .+.+.+.+ .+|++-|....-...++..++.+.||+|++.+.++.+++|....++..+
T Consensus 42 ~~~~a~~~g~~~~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~ 113 (344)
T 3euw_A 42 AQRLAEANGAEAV------ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIG 113 (344)
T ss_dssp HHHHHHTTTCEEE------SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHG
T ss_pred HHHHHHHcCCcee------CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 4566778885443 24444444 6999999999999999999999999999999999989999887766443
No 232
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=87.00 E-value=2.6 Score=41.48 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=78.6
Q ss_pred HHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc--CCcEEEeecCcccHHHHhh---hcceecccC
Q 022892 40 KSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY--DIPIVTDVHETVQCEEVGK---VADIIQIPA 114 (290)
Q Consensus 40 ~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~--Gi~~~s~~~d~~~~~~l~~---~~d~~kIgs 114 (290)
++.+.+.|+|.|....-.. .+.+.+++++..+. .+.+++-+-.++.++-+++ ..|.+-||-
T Consensus 198 l~~~~~~~vD~i~~sfVr~--------------a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaR 263 (499)
T 3hqn_D 198 LQFGVEQGVDMIFASFIRS--------------AEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVAR 263 (499)
T ss_dssp HHHHHHTTCSEEEETTCCS--------------HHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEH
T ss_pred HHHHHHcCCCEEEecCCCC--------------HHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEcc
Confidence 3455667999988753331 47788888888654 5889999999888776665 489999988
Q ss_pred Ccc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEE
Q 022892 115 FLC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 115 ~~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+|+ -|-.+++.+-..||||++-|-|- .|-.|+-..+..+.. |-+-++|
T Consensus 264 GDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~d-G~DavML 330 (499)
T 3hqn_D 264 GDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFN-GADCVML 330 (499)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHH-TCSEEEE
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHc-CCcEEEE
Confidence 876 34456677778899999955542 377888887777653 5554555
No 233
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.00 E-value=7.5 Score=35.25 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=41.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcC-CcEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYD-IPIV 91 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~G-i~~~ 91 (290)
++++-||||.++. |...+++.+++..+ +|+|++.-. .|+ |.++. +++ +...+++++..+ +|++
T Consensus 78 ~grvpViaGvg~~-~t~~ai~la~~A~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~~lPii 142 (303)
T 2wkj_A 78 KGKIKLIAHVGCV-STAESQQLAASAKR----YGFDAVSAV--------TPF-YYPFS-FEEHCDHYRAIIDSADGLPMV 142 (303)
T ss_dssp TTTSEEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHHh----CCCCEEEec--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCCEE
Confidence 4578899999974 56666666666554 699987653 122 22222 344 456777888878 8887
Q ss_pred E
Q 022892 92 T 92 (290)
Q Consensus 92 s 92 (290)
-
T Consensus 143 l 143 (303)
T 2wkj_A 143 V 143 (303)
T ss_dssp E
T ss_pred E
Confidence 4
No 234
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=86.91 E-value=2.5 Score=38.86 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=58.3
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|+.. ..+ .+.+.+ .+ .+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 62 ~~~~a~~~g~~~--~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 137 (357)
T 3ec7_A 62 AQAALDKYAIEA--KDY--NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKN 137 (357)
T ss_dssp HHHHHHHHTCCC--EEE--SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC--eee--CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHh
Confidence 345667778521 111 234444 44 699999999999999999999999999999999999999999988877766
Q ss_pred CC
Q 022892 157 GN 158 (290)
Q Consensus 157 Gn 158 (290)
|.
T Consensus 138 g~ 139 (357)
T 3ec7_A 138 GK 139 (357)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 235
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=86.82 E-value=3.6 Score=37.34 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=57.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.|++..+ +|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 67 ~grvpviaGvg~~-~t~~ai~la~~A~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 131 (297)
T 2rfg_A 67 QGRVPVIAGAGSN-NPVEAVRYAQHAQQ----AGADAVLCV--------AGY-YNRPS-QEGLYQHFKMVHDAIDIPIIV 131 (297)
T ss_dssp TTSSCBEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCT-TTCCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCeEEEccCCC-CHHHHHHHHHHHHh----cCCCEEEEc--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4567799999974 56666666666555 699987653 122 22233 344 55677888889999884
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCccCCHH
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFLCRQTD 121 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~~~n~~ 121 (290)
= .++++.+..|.+ .+-.+|-.+.++.++.
T Consensus 132 Yn~P~~tg~~l~~~~~~~La~~pnIvgiKds~gd~~~~~ 170 (297)
T 2rfg_A 132 YNIPPRAVVDIKPETMARLAALPRIVGVKDATTDLARIS 170 (297)
T ss_dssp EECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCCTTHHH
T ss_pred EeCccccCCCCCHHHHHHHHcCCCEEEEEeCCCCHHHHH
Confidence 1 234444444444 2445677777766543
No 236
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.78 E-value=4.3 Score=37.12 Aligned_cols=67 Identities=12% Similarity=0.011 Sum_probs=51.9
Q ss_pred HhcCCcEEEeecCcccHHHHhh-hcceecccCC-------ccCCHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 84 IAYDIPIVTDVHETVQCEEVGK-VADIIQIPAF-------LCRQTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 84 ~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~-------~~~n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave 151 (290)
++.|++++..+.+.+.+..+.+ .+|++.+-+. ...+..+++++. ..+.||+..-|.. +.+++..++.
T Consensus 107 ~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~-~~~~~~~al~ 182 (332)
T 2z6i_A 107 HEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA-DGEGAAAGFM 182 (332)
T ss_dssp HHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHHHHH
T ss_pred HHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC-CHHHHHHHHH
Confidence 4569999999988888877776 6999988321 245667888765 4689999999998 8998887765
No 237
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=86.69 E-value=1.7 Score=43.03 Aligned_cols=108 Identities=16% Similarity=0.135 Sum_probs=78.0
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC--CcEEEeecCcccHHHHhh---hcceecccCC
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD--IPIVTDVHETVQCEEVGK---VADIIQIPAF 115 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G--i~~~s~~~d~~~~~~l~~---~~d~~kIgs~ 115 (290)
+.+.+.|+|.|....-.. .+.+.+++++..+.| +.+++-+-.++.++-+++ ..|.+-||-+
T Consensus 224 ~f~~~~~vD~Ia~SFVr~--------------a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARG 289 (520)
T 3khd_A 224 NFAIPMGCNFIAASFIQS--------------ADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARG 289 (520)
T ss_dssp HTHHHHTCCEEEETTCCS--------------HHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHH
T ss_pred HHHHHcCCCEEEECCCCC--------------HHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccc
Confidence 455667999988753331 478899999987765 889999999888776665 4788888877
Q ss_pred cc-----------CCHHHHHHHHhcCCeEEEeCCC--------CCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 116 LC-----------RQTDLLVAAAKTGKIINIKKGQ--------FCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 116 ~~-----------~n~~lL~~~a~~~~PVilstG~--------~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
|+ -|-.+++.+-..||||+.-|-| ..|-.|+-..+..+.. |-+-++|
T Consensus 290 DLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVld-GaDavML 355 (520)
T 3khd_A 290 DLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLD-GTDCVML 355 (520)
T ss_dssp HHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHh-CCCEEEe
Confidence 66 3445677777889999965554 2377888887777753 5555555
No 238
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=86.67 E-value=6.3 Score=33.72 Aligned_cols=71 Identities=10% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCcEEEeecCcccHHHHhh-hccee--cccCCc-------cCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 87 DIPIVTDVHETVQCEEVGK-VADII--QIPAFL-------CRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 87 Gi~~~s~~~d~~~~~~l~~-~~d~~--kIgs~~-------~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
|++++.++.+++.+..+.+ .+|++ .+.+.+ -.+..+++++.+.+.||+..=|.. |.+++....+ .
T Consensus 133 ~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~-s~~~~~~~~~----~ 207 (234)
T 1yxy_A 133 NQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIH-SPEEAKKIND----L 207 (234)
T ss_dssp TCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESCCC-SHHHHHHHHT----T
T ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhCCCCEEEECCCC-CHHHHHHHHH----C
Confidence 8999999998888877665 69998 555432 245677888765589999999988 8998887543 4
Q ss_pred CCCcEE
Q 022892 157 GNPNVM 162 (290)
Q Consensus 157 Gn~~i~ 162 (290)
|-.-++
T Consensus 208 Gad~v~ 213 (234)
T 1yxy_A 208 GVAGIV 213 (234)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 654333
No 239
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.65 E-value=4.3 Score=37.16 Aligned_cols=90 Identities=10% Similarity=0.035 Sum_probs=57.2
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++ |...+++.+++..+ +|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 79 ~grvpViaGvg~--~t~~ai~la~~A~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 142 (316)
T 3e96_A 79 HGRALVVAGIGY--ATSTAIELGNAAKA----AGADAVMIH--------MPI-HPYVT-AGGVYAYFRDIIEALDFPSLV 142 (316)
T ss_dssp TTSSEEEEEECS--SHHHHHHHHHHHHH----HTCSEEEEC--------CCC-CSCCC-HHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCCcEEEEeCc--CHHHHHHHHHHHHh----cCCCEEEEc--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 457889999985 77777777766665 699998753 122 22222 344 55677888888999986
Q ss_pred e----ecCcccHHHHhh--hcceecccCCccCC
Q 022892 93 D----VHETVQCEEVGK--VADIIQIPAFLCRQ 119 (290)
Q Consensus 93 ~----~~d~~~~~~l~~--~~d~~kIgs~~~~n 119 (290)
= .++++.+..|.+ .+-.+|-.+.++.+
T Consensus 143 Yn~g~~l~~~~~~~La~~pnIvgiKdssgd~~~ 175 (316)
T 3e96_A 143 YFKDPEISDRVLVDLAPLQNLVGVKYAINDLPR 175 (316)
T ss_dssp EECCTTSCTHHHHHHTTCTTEEEEEECCCCHHH
T ss_pred EeCCCCCCHHHHHHHHcCCCEEEEEeCCCCHHH
Confidence 3 244445555544 24456666665543
No 240
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.60 E-value=5.3 Score=36.06 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=54.4
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++. +++|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 67 ~grvpviaGvg~~-~t~~ai~la~~A----~~~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 131 (294)
T 2ehh_A 67 AGRIKVIAGTGGN-ATHEAVHLTAHA----KEVGADGALVV--------VPY-YNKPT-QRGLYEHFKTVAQEVDIPIII 131 (294)
T ss_dssp TTSSEEEEECCCS-CHHHHHHHHHHH----HHTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHH----HhcCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4577899999974 566666666555 44799987653 122 22222 344 55677888888999874
Q ss_pred e--------ecCcccHHHHh-h--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVG-K--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~-~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|. + .+-.+|-.+.++.++
T Consensus 132 Yn~P~~tg~~l~~~~~~~La~~~pnivgiKds~gd~~~~ 170 (294)
T 2ehh_A 132 YNIPSRTCVEISVDTMFKLASECENIVASKESTPNMDRI 170 (294)
T ss_dssp EECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCHHHH
T ss_pred EeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCCCCHHHH
Confidence 1 23444444444 3 244556666655443
No 241
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=86.58 E-value=14 Score=33.70 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=50.3
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c---CCCEEEeCCCCCCCCCCC
Q 022892 131 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A---NCPVVADVTHSLQQPAGK 206 (290)
Q Consensus 131 ~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~---~~pV~~D~sHs~~~~~~~ 206 (290)
..|||.|+.- +.+|+..|++.....|-+ ++-..+ +|...-..+..+..|++ . +.+|++=.
T Consensus 176 lKVIlEt~~L-t~eei~~A~~ia~eaGAD---fVKTST--Gf~~~GAT~edv~lmr~~v~~~g~~v~VKA---------- 239 (288)
T 3oa3_A 176 LKVILETSQL-TADEIIAGCVLSSLAGAD---YVKTST--GFNGPGASIENVSLMSAVCDSLQSETRVKA---------- 239 (288)
T ss_dssp EEEECCGGGC-CHHHHHHHHHHHHHTTCS---EEECCC--SSSSCCCCHHHHHHHHHHHHHSSSCCEEEE----------
T ss_pred ceEEEECCCC-CHHHHHHHHHHHHHcCCC---EEEcCC--CCCCCCCCHHHHHHHHHHHHHhCCCceEEE----------
Confidence 6789999987 999999999988888863 233332 33322234556677776 3 55555522
Q ss_pred ccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 207 KLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 207 ~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
++|.|.. .-+++-+.+||+
T Consensus 240 --------AGGIrt~--edAl~mi~aGA~ 258 (288)
T 3oa3_A 240 --------SGGIRTI--EDCVKMVRAGAE 258 (288)
T ss_dssp --------ESSCCSH--HHHHHHHHTTCS
T ss_pred --------eCCCCCH--HHHHHHHHcCCc
Confidence 2354443 345666788997
No 242
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=86.57 E-value=2 Score=39.54 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=55.4
Q ss_pred HHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 83 KIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 83 ~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
++++|+++. .+.+.+ .+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 46 a~~~g~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 116 (359)
T 3e18_A 46 AAQKGLKIY------ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVN 116 (359)
T ss_dssp HHTTTCCBC------SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred HHhcCCcee------CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhC
Confidence 467888643 244444 43 6999999999999999999999999999999999999999998887665554
No 243
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.54 E-value=4.9 Score=36.77 Aligned_cols=70 Identities=10% Similarity=-0.040 Sum_probs=55.1
Q ss_pred HHHHhcCCcEEEeecCcccHHHHhh-hcceecc-c----C--CccCCHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHH
Q 022892 81 KVKIAYDIPIVTDVHETVQCEEVGK-VADIIQI-P----A--FLCRQTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 81 ~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kI-g----s--~~~~n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave 151 (290)
+.+++.|++++..+.+.+.+..+.+ .+|++.+ | . +...+..++.++. ..+.||+..-|.. +.+++..++.
T Consensus 118 ~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~-~~~dv~~al~ 196 (326)
T 3bo9_A 118 RELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIA-DGRGMAAAFA 196 (326)
T ss_dssp HHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHHHHH
T ss_pred HHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHH
Confidence 4445679999999999888888777 5999988 2 1 2346778888865 4689999999999 9999988765
No 244
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=86.38 E-value=6.5 Score=35.35 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=57.7
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.|++..+ +|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 67 ~gr~pviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~ia~a~~lPiil 131 (289)
T 2yxg_A 67 NGRVQVIAGAGSN-CTEEAIELSVFAED----VGADAVLSI--------TPY-YNKPT-QEGLRKHFGKVAESINLPIVL 131 (289)
T ss_dssp TTSSEEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEeCCCC-CHHHHHHHHHHHHh----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4578899999974 56666666666555 699987653 122 22222 344 55677888889999884
Q ss_pred e--------ecCcccHHHHh-h--hcceecccCCccCCHH
Q 022892 93 D--------VHETVQCEEVG-K--VADIIQIPAFLCRQTD 121 (290)
Q Consensus 93 ~--------~~d~~~~~~l~-~--~~d~~kIgs~~~~n~~ 121 (290)
= .++++.+..|. + .+-.+|-.+.++.+..
T Consensus 132 Yn~P~~tg~~l~~~~~~~La~~~pnivgiK~s~gd~~~~~ 171 (289)
T 2yxg_A 132 YNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVS 171 (289)
T ss_dssp EECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCTHHHH
T ss_pred EeCccccCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHH
Confidence 1 23444455554 3 2556677777765543
No 245
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=86.31 E-value=1.4 Score=40.37 Aligned_cols=54 Identities=15% Similarity=-0.003 Sum_probs=46.6
Q ss_pred Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 103 VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 103 l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
+.+ .+|++-|..-.-.+.++..++.+.||+|++.+.++.|++|....++..++.
T Consensus 61 l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (349)
T 3i23_A 61 LTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEK 115 (349)
T ss_dssp HSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHc
Confidence 444 599999999999999999999999999999999999999988887765544
No 246
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=86.29 E-value=2.2 Score=41.23 Aligned_cols=74 Identities=4% Similarity=-0.054 Sum_probs=58.9
Q ss_pred HHHHHHHhcCCc---EEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcC------CeEEEeCCCCCCHHHH
Q 022892 78 ILEKVKIAYDIP---IVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTG------KIINIKKGQFCASSVM 146 (290)
Q Consensus 78 ~L~~~~~~~Gi~---~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~------~PVilstG~~~tl~e~ 146 (290)
..+++++++|++ +.+ +.+. +++ .+|++-|...+-.+.++..++.+.| |+|++.+.++.+++|.
T Consensus 81 ~a~~~a~~~g~~~~~~~~------d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea 154 (479)
T 2nvw_A 81 SSLQTIEQLQLKHATGFD------SLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQA 154 (479)
T ss_dssp HHHHHHHHTTCTTCEEES------CHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHH
T ss_pred HHHHHHHHcCCCcceeeC------CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHH
Confidence 455667888986 332 2334 443 6999999999988899988888889 9999999999999999
Q ss_pred HHHHHHHHHcC
Q 022892 147 VNSAEKVRLAG 157 (290)
Q Consensus 147 ~~Ave~i~~~G 157 (290)
...++..++.|
T Consensus 155 ~~l~~~a~~~g 165 (479)
T 2nvw_A 155 EELYSISQQRA 165 (479)
T ss_dssp HHHHHHHHTCT
T ss_pred HHHHHHHHHcC
Confidence 98888777665
No 247
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=86.27 E-value=1.9 Score=43.28 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=80.7
Q ss_pred HHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcC---CcEEEeecCcccHHHHhh---hcceecccCC
Q 022892 42 ISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYD---IPIVTDVHETVQCEEVGK---VADIIQIPAF 115 (290)
Q Consensus 42 ~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~G---i~~~s~~~d~~~~~~l~~---~~d~~kIgs~ 115 (290)
.+-+.|+|.|....-.. .+..+.+++++++.| +.+++-+-+++.++-+++ ..|.+-||-+
T Consensus 181 ~~l~~g~d~v~~sfV~~--------------a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVarg 246 (587)
T 2e28_A 181 FGIRQGIDFIAASFVRR--------------ASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARG 246 (587)
T ss_dssp HHHHHTCSEEEESSCCS--------------HHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHH
T ss_pred HHHHcCCCEEEECCCCC--------------HHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCc
Confidence 33446999998754331 578888999998775 789999999888776665 5899888887
Q ss_pred cc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC
Q 022892 116 LC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND 174 (290)
Q Consensus 116 ~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~ 174 (290)
|+ -|..+++.+-+.||||++-|-|- .|=.|+-+.+..+.. |.+-++|---+..-.||.
T Consensus 247 DLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~d-G~DavMLSgETA~G~yPv 323 (587)
T 2e28_A 247 DLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFD-GTDAVMLSGETAAGQYPV 323 (587)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEESHHHHTCSCHH
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhh-CcceeeecccccCCCCHH
Confidence 66 23445666778899999988764 245777777776653 555455422222223764
No 248
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=86.26 E-value=22 Score=33.28 Aligned_cols=77 Identities=13% Similarity=-0.028 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
+.++....++.+...|-.-|++..+.....++.. ++..+..+|+ +++||+....-+
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~--~~~~~~~ik~~~~iPvi~~Ggi~--------------------- 309 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITY--PEGFREQMRQRFKGGLIYCGNYD--------------------- 309 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------CC--CTTHHHHHHHHCCSEEEEESSCC---------------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcc--hHHHHHHHHHHCCCCEEEECCCC---------------------
Confidence 5678888888888888766665443211112211 4566778888 889998732221
Q ss_pred cHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 221 LIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 221 ~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+..+..+++.| ||++++=+-+
T Consensus 310 --~~~a~~~l~~g~aD~V~igR~~ 331 (377)
T 2r14_A 310 --AGRAQARLDDNTADAVAFGRPF 331 (377)
T ss_dssp --HHHHHHHHHTTSCSEEEESHHH
T ss_pred --HHHHHHHHHCCCceEEeecHHH
Confidence 56677788887 9998887765
No 249
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=86.08 E-value=4.6 Score=36.99 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=42.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++. +++|+|++.-. .|+.| .+. +++ +...+++++..++|++-
T Consensus 90 ~grvpViaGvg~~-st~eai~la~~A----~~~Gadavlv~--------~P~y~-~~s-~~~l~~~f~~va~a~~lPiil 154 (314)
T 3qze_A 90 KGRIPVIAGTGAN-STREAVALTEAA----KSGGADACLLV--------TPYYN-KPT-QEGMYQHFRHIAEAVAIPQIL 154 (314)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHHHH----HHTTCSEEEEE--------CCCSS-CCC-HHHHHHHHHHHHHHSCSCEEE
T ss_pred CCCCcEEEeCCCc-CHHHHHHHHHHH----HHcCCCEEEEc--------CCCCC-CCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4567899999874 566666666654 45799987753 12212 222 344 55677888888999884
No 250
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=85.94 E-value=8.6 Score=34.89 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=54.2
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |....++.+++.. ++|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 83 ~grvpviaGvg~~-st~~ai~la~~A~----~~Gadavlv~--------~P~-y~~~~-~~~l~~~f~~ia~a~~lPiil 147 (304)
T 3cpr_A 83 GDRAKLIAGVGTN-NTRTSVELAEAAA----SAGADGLLVV--------TPY-YSKPS-QEGLLAHFGAIAAATEVPICL 147 (304)
T ss_dssp TTTSEEEEECCCS-CHHHHHHHHHHHH----HTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCcEEecCCCC-CHHHHHHHHHHHH----hcCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4577899999974 5666666666554 4799987653 122 22222 344 55677888888999874
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|.+ .+-.+|-.++++.++
T Consensus 148 Yn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd~~~~ 185 (304)
T 3cpr_A 148 YDIPGRSGIPIESDTMRRLSELPTILAVXDAKGDLVAA 185 (304)
T ss_dssp EECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCCHHHH
T ss_pred EeCccccCcCCCHHHHHHHHcCCCEEEEecCCCCHHHH
Confidence 1 133333434433 244556666655443
No 251
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=85.90 E-value=1.9 Score=39.01 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=53.9
Q ss_pred HHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 83 KIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 83 ~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
++++|++-.. .+.+.+ .+ .+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 47 a~~~~~~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~ 118 (329)
T 3evn_A 47 ANKYHLPKAY-----DKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCN 118 (329)
T ss_dssp --CCCCSCEE-----SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred HHHcCCCccc-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcC
Confidence 4566775221 233444 33 6999999999999999999999999999999999999999999888777654
No 252
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=85.84 E-value=4.9 Score=36.45 Aligned_cols=64 Identities=17% Similarity=0.335 Sum_probs=41.4
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.|++. +++|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 79 ~grvpViaGvg~~-~t~~ai~la~~A----~~~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 143 (301)
T 1xky_A 79 DKRVPVIAGTGSN-NTHASIDLTKKA----TEVGVDAVMLV--------APY-YNKPS-QEGMYQHFKAIAESTPLPVML 143 (301)
T ss_dssp TTSSCEEEECCCS-CHHHHHHHHHHH----HHTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHTCSSCEEE
T ss_pred CCCceEEeCCCCC-CHHHHHHHHHHH----HhcCCCEEEEc--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4567799999974 566666666554 45799987653 122 22222 344 55677888888999874
No 253
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=85.76 E-value=13 Score=32.46 Aligned_cols=161 Identities=14% Similarity=0.057 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC----cccHHHHhhhcc
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE----TVQCEEVGKVAD 108 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d----~~~~~~l~~~~d 108 (290)
.+--+++.+.+.+.|+++|.-. ...++..++..+..++.+.+.+-- ...---+.+.-+
T Consensus 18 ~~~i~~l~~~a~~~~~~aVcv~------------------p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~ 79 (220)
T 1ub3_A 18 LEEVAKAAEEALEYGFYGLCIP------------------PSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAAL 79 (220)
T ss_dssp HHHHHHHHHHHHHHTCSEEECC------------------GGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEC------------------HHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHH
Q ss_pred eecccCCcc------------------CCHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 109 IIQIPAFLC------------------RQTDLLVAAA-KTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 109 ~~kIgs~~~------------------~n~~lL~~~a-~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
.++-|+.++ .++.-+++++ +...|||+.|+.- +.+++..|++.....|-+-|= ++
T Consensus 80 Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l-~~e~i~~a~~ia~eaGADfVK-----Ts 153 (220)
T 1ub3_A 80 ACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYF-SPEEIARLAEAAIRGGADFLK-----TS 153 (220)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS-CHHHHHHHHHHHHHHTCSEEE-----CC
T ss_pred HHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCC-CHHHHHHHHHHHHHhCCCEEE-----eC
Q ss_pred CCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC--EE
Q 022892 170 FGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD--GV 237 (290)
Q Consensus 170 ~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~--G~ 237 (290)
++|...-..+..+..|++ .+.+|++ ..++|.|.. .-++.-+.+||+ |.
T Consensus 154 TGf~~~gat~~dv~~m~~~vg~~v~V------------------kaaGGirt~--~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVAQGRAQV------------------KAAGGIRDR--ETALRMLKAGASRLGT 204 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHHTTSSEE------------------EEESSCCSH--HHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCHHHHHHHHHhhCCCCeE------------------EEECCCCCH--HHHHHHHHCCCcccch
No 254
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=85.76 E-value=2.7 Score=37.81 Aligned_cols=75 Identities=13% Similarity=0.025 Sum_probs=56.4
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
++++++++|++.. ..+.. +.+.+.+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 40 ~~~~a~~~g~~~~--~~~~~--~~l~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g 114 (323)
T 1xea_A 40 LGTLATRYRVSAT--CTDYR--DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH 114 (323)
T ss_dssp HHHHHHHTTCCCC--CSSTT--GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCcc--ccCHH--HHhhcCCCEEEEECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcC
Confidence 4556778888631 22222 234346999999999888888888888899999999999889999888887666554
No 255
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=85.71 E-value=13 Score=33.58 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=40.7
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEE
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIV 91 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~ 91 (290)
++-||+|.++. |...+++.+++..+ +|+|++... .|+.| ++.-+.-+...+++++..++|++
T Consensus 77 rvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~y~-~~s~~~l~~~f~~va~a~~lPii 138 (301)
T 3m5v_A 77 KVKVLAGAGSN-ATHEAVGLAKFAKE----HGADGILSV--------APYYN-KPTQQGLYEHYKAIAQSVDIPVL 138 (301)
T ss_dssp SCEEEEECCCS-SHHHHHHHHHHHHH----TTCSEEEEE--------CCCSS-CCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEeCCCC-CHHHHHHHHHHHHH----cCCCEEEEc--------CCCCC-CCCHHHHHHHHHHHHHhCCCCEE
Confidence 78899999873 56666666665544 799987653 12212 22212335567788888899988
No 256
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=85.68 E-value=3.7 Score=37.96 Aligned_cols=181 Identities=13% Similarity=0.069 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCC-ChhHHHHHHHHHHHhcCCcEEEeec----CcccHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGP-GMVEGLKILEKVKIAYDIPIVTDVH----ETVQCEE 102 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~-~~~~~l~~L~~~~~~~Gi~~~s~~~----d~~~~~~ 102 (290)
+.+..+++|++|.+ +|++.|=-.+|. .|.. .|++. .+ ..++.++++.+..+.++..=.. .++.++.
T Consensus 22 ~~~~k~~ia~~L~~----aGv~~IEvg~~~-~p~~---~f~~~~~~-~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~ 92 (320)
T 3dxi_A 22 NSKIVDAYILAMNE----LPIDYLEVGYRN-KPSK---EYMGKFGY-TPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNH 92 (320)
T ss_dssp CHHHHHHHHHHHHT----TTCCEEEEEECC-SCCS---SCCCHHHH-CCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHH
T ss_pred CHHHHHHHHHHHHH----hCCCEEEEeccc-CCcc---cccccccc-ChHHHHHHHhhccCCeEEEEecCCCCChhhHHH
Confidence 56778888888877 699987766653 1321 12210 01 0133344433345665544321 2334544
Q ss_pred H---h-hhcceecccCCccCCHH----HHHHHHhcCCeEEEeC----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC
Q 022892 103 V---G-KVADIIQIPAFLCRQTD----LLVAAAKTGKIINIKK----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF 170 (290)
Q Consensus 103 l---~-~~~d~~kIgs~~~~n~~----lL~~~a~~~~PVilst----G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~ 170 (290)
+ . ..+|.+-|.. .+.|.+ .++++.+.|+.|.+.- +.. +.++...-+..+ ..|...|.|+.....
T Consensus 93 ~~~a~~~Gvd~~ri~~-~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~-~~~~~l~~~~~~-~~G~~~i~l~Dt~G~- 168 (320)
T 3dxi_A 93 LLLPIIGLVDMIRIAI-DPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWA-EMNGFLSKLKAI-DKIADLFCMVDSFGG- 168 (320)
T ss_dssp HHGGGTTTCSEEEEEE-CGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGG-GSTTSGGGGGGG-TTTCSEEEEECTTSC-
T ss_pred HHHhhhcCCCEEEEEe-cHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCC-CHHHHHHHHHHh-hCCCCEEEECcccCC-
Confidence 3 1 2588887775 555554 3344556788887653 222 222222222222 457666666654432
Q ss_pred CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 171 GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 171 ~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
..|. .+ ..-+..+++ +++||.+ +.|.. .| +...-+.+|+.+||+ .|+.-+.
T Consensus 169 ~~P~-~~-~~lv~~l~~~~~~~i~~-H~Hn~---------------~G---~a~an~laA~~aGa~--~vd~si~ 220 (320)
T 3dxi_A 169 ITPK-EV-KNLLKEVRKYTHVPVGF-HGHDN---------------LQ---LGLINSITAIDDGID--FIDATIT 220 (320)
T ss_dssp CCHH-HH-HHHHHHHHHHCCSCEEE-ECBCT---------------TS---CHHHHHHHHHHTTCS--EEEEBGG
T ss_pred CCHH-HH-HHHHHHHHHhCCCeEEE-EeCCC---------------Cc---cHHHHHHHHHHhCCC--EEEEecc
Confidence 1222 12 145666777 7899999 77764 12 224557788999998 8887654
No 257
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=85.59 E-value=2.4 Score=37.57 Aligned_cols=66 Identities=21% Similarity=0.313 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcceecc
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQI 112 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kI 112 (290)
.+.++.|.+ +|+|+|..+. . .|..++.-++.++++.+ ..+|++-.++....+ ...+|.+-|
T Consensus 23 ~~~~~~l~~----~GaD~IelG~-S----------~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i---~~gvDg~ii 83 (234)
T 2f6u_A 23 DEIIKAVAD----SGTDAVMISG-T----------QNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNV---VYDVDYLFV 83 (234)
T ss_dssp HHHHHHHHT----TTCSEEEECC-C----------TTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCC---CCCSSEEEE
T ss_pred HHHHHHHHH----cCCCEEEECC-C----------CCCCHHHHHHHHHHhcC-CCCCEEEecCCcchh---hcCCCEEEE
Confidence 444555544 6999998874 1 23334556777777765 899999999885444 446888877
Q ss_pred cCCcc
Q 022892 113 PAFLC 117 (290)
Q Consensus 113 gs~~~ 117 (290)
++=-.
T Consensus 84 pdLp~ 88 (234)
T 2f6u_A 84 PTVLN 88 (234)
T ss_dssp EEETT
T ss_pred cccCC
Confidence 76544
No 258
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=85.46 E-value=1.7 Score=39.40 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=49.6
Q ss_pred cHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 99 QCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 99 ~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
+.+. +.+ .+|++-|..-+-.+.++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 57 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g 117 (336)
T 2p2s_A 57 SAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETG 117 (336)
T ss_dssp CHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHC
T ss_pred CHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 3444 444 6999999999999999999999999999999999999999988888776654
No 259
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=85.44 E-value=20 Score=36.66 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEEeCCCCCCCCCCCccCCCCccCCCCc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLR 219 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~ 219 (290)
+++.+.+.++.+.+.|...|.|+.-... ..|.. + ..-+..+++ + ++||++ +.|-. .
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~-~~P~~-v-~~lV~~lk~~~p~~~I~~-H~Hnd------------------~ 316 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGL-LKPTA-C-TMLVSSLRDRFPDLPLHI-HTHDT------------------S 316 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSC-CCHHH-H-HHHHHHHHHHSTTCCEEE-ECCCT------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCC-cCHHH-H-HHHHHHHHHhCCCCeEEE-EECCC------------------c
Confidence 7899999999999999987777776542 12221 1 245667777 7 799999 88864 2
Q ss_pred ccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 220 ELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 220 ~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
.+...-+.+|+.+||+ .|+.-+.
T Consensus 317 GlAvANslaAveAGa~--~VD~ti~ 339 (718)
T 3bg3_A 317 GAGVAAMLACAQAGAD--VVDVAAD 339 (718)
T ss_dssp SCHHHHHHHHHHTTCS--EEEEBCG
T ss_pred cHHHHHHHHHHHhCCC--EEEecCc
Confidence 2335567789999998 8887654
No 260
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.42 E-value=14 Score=32.24 Aligned_cols=121 Identities=14% Similarity=0.076 Sum_probs=69.2
Q ss_pred cccHHHHhh-hccee--cccCCccCC---H----HHHHHHHhcCCeEEEeCC---CC----CCHHHHHHHHHHHHHcCCC
Q 022892 97 TVQCEEVGK-VADII--QIPAFLCRQ---T----DLLVAAAKTGKIINIKKG---QF----CASSVMVNSAEKVRLAGNP 159 (290)
Q Consensus 97 ~~~~~~l~~-~~d~~--kIgs~~~~n---~----~lL~~~a~~~~PVilstG---~~----~tl~e~~~Ave~i~~~Gn~ 159 (290)
..+++.+.+ .++++ ++-...... . .+.+.+.+.+.|+++..+ .. .+.+++..+++.....|-+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 455665554 57777 432222221 1 223334456999999762 11 3677888887777778865
Q ss_pred cEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEE
Q 022892 160 NVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 238 (290)
Q Consensus 160 ~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~ 238 (290)
++.++ |+ .|+..+..+++ .++||+.-..-. ....+........+...||+|+.
T Consensus 182 -~i~~~------~~---~~~~~l~~i~~~~~ipvva~GGi~----------------~~~~~~~~~~~~~~~~~Ga~gv~ 235 (273)
T 2qjg_A 182 -IVKTS------YT---GDIDSFRDVVKGCPAPVVVAGGPK----------------TNTDEEFLQMIKDAMEAGAAGVA 235 (273)
T ss_dssp -EEEEC------CC---SSHHHHHHHHHHCSSCEEEECCSC----------------CSSHHHHHHHHHHHHHHTCSEEE
T ss_pred -EEEEC------CC---CCHHHHHHHHHhCCCCEEEEeCCC----------------CCCHHHHHHHHHHHHHcCCcEEE
Confidence 44333 22 47778888877 789997611110 01112222334456789999998
Q ss_pred EeeeC
Q 022892 239 MEVHD 243 (290)
Q Consensus 239 IEkH~ 243 (290)
+=+.+
T Consensus 236 vg~~i 240 (273)
T 2qjg_A 236 VGRNI 240 (273)
T ss_dssp CCHHH
T ss_pred eeHHh
Confidence 86655
No 261
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.39 E-value=4.9 Score=36.83 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.|++.. ++|+|++... .|+.| ++.-++-+...+++++..++|++-
T Consensus 91 ~grvpViaGvg~~-~t~~ai~la~~A~----~~Gadavlv~--------~P~y~-~~s~~~l~~~f~~va~a~~lPiil 155 (315)
T 3na8_A 91 AHRVPTIVSVSDL-TTAKTVRRAQFAE----SLGAEAVMVL--------PISYW-KLNEAEVFQHYRAVGEAIGVPVML 155 (315)
T ss_dssp TTSSCBEEECCCS-SHHHHHHHHHHHH----HTTCSEEEEC--------CCCSS-CCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHH----hcCCCEEEEC--------CCCCC-CCCHHHHHHHHHHHHHhCCCcEEE
Confidence 4567899999863 5666666665554 4799997753 22222 233133455678888889999883
No 262
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.37 E-value=5.4 Score=36.53 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=55.2
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.+++.. ++|+|++... .|| |..+. +++ +...+++++..++|++-
T Consensus 89 ~grvpViaGvg~~-st~~ai~la~~A~----~~Gadavlv~--------~P~-y~~~~-~~~l~~~f~~va~a~~lPiil 153 (315)
T 3si9_A 89 AKRVPVVAGAGSN-STSEAVELAKHAE----KAGADAVLVV--------TPY-YNRPN-QRGLYTHFSSIAKAISIPIII 153 (315)
T ss_dssp TTSSCBEEECCCS-SHHHHHHHHHHHH----HTTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEeCCCC-CHHHHHHHHHHHH----hcCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHcCCCCEEE
Confidence 4567899999874 5666666666554 4799987653 122 22233 344 55677888888999884
Q ss_pred e--------ecCcccHHHHhh-h--cceecccCCccCCHH
Q 022892 93 D--------VHETVQCEEVGK-V--ADIIQIPAFLCRQTD 121 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~-~--~d~~kIgs~~~~n~~ 121 (290)
= .++++.+..|.+ . +-.+|-.+.++.+..
T Consensus 154 Yn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~ 193 (315)
T 3si9_A 154 YNIPSRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERAS 193 (315)
T ss_dssp EECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHH
T ss_pred EeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHH
Confidence 2 233344444443 2 445566666655443
No 263
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=85.28 E-value=5.3 Score=35.51 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=52.8
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCcc
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKL 208 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~ 208 (290)
..+|||.||.- +.+|+..|++.....|-+ ++...+-|.+. -..+..+..|++ .+.+|++=
T Consensus 144 ~lKVIlEt~~L-t~eei~~a~~ia~~aGAD---fVKTSTGf~~g--gAt~~dv~lmr~~vg~~v~VK------------- 204 (239)
T 3ngj_A 144 LTKVIIECCYL-TNEEKVEVCKRCVAAGAE---YVKTSTGFGTH--GATPEDVKLMKDTVGDKALVK------------- 204 (239)
T ss_dssp EEEEECCGGGS-CHHHHHHHHHHHHHHTCS---EEECCCSSSSC--CCCHHHHHHHHHHHGGGSEEE-------------
T ss_pred ceEEEEecCCC-CHHHHHHHHHHHHHHCcC---EEECCCCCCCC--CCCHHHHHHHHHhhCCCceEE-------------
Confidence 36899999985 999999999998888863 33443333222 245678888888 55555541
Q ss_pred CCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 209 DGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 209 ~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
.++|.|.. .-+.+-+.+||+
T Consensus 205 -----asGGIrt~--~da~~~i~aGA~ 224 (239)
T 3ngj_A 205 -----AAGGIRTF--DDAMKMINNGAS 224 (239)
T ss_dssp -----EESSCCSH--HHHHHHHHTTEE
T ss_pred -----EeCCCCCH--HHHHHHHHhccc
Confidence 12455544 345556788987
No 264
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=85.24 E-value=4.7 Score=37.94 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=69.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCC----CCCC---CCCCc--hhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMF----GYND---LIVDP--RNLEWMREANCPVVADVTHSLQQPAGKKLDGGG 212 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~----~y~~---~~~dL--~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~ 212 (290)
+..+++.|++.+...|.+.+++.-..|.. .... +.++. ..+...++.+..|.|++--+-
T Consensus 85 ~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~------------ 152 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDAL------------ 152 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGG------------
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCC------------
Confidence 78999999998888888888887776621 1111 01111 123333445677777553220
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022892 213 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 271 (290)
Q Consensus 213 ~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~ 271 (290)
.-..+++..++.++..+||+-+ .++|-.-.+.|.++.++++.+++.
T Consensus 153 ---r~~~~~~~~~~~~~~~~Ga~~i----------~l~DT~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 153 ---RSEIDFLAEICGAVIEAGATTI----------NIPDTVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp ---GSCHHHHHHHHHHHHHHTCCEE----------EEECSSSCCCHHHHHHHHHHHHHH
T ss_pred ---ccCHHHHHHHHHHHHHcCCCEE----------EecCccCCcCHHHHHHHHHHHHHh
Confidence 0124677788889999999832 127888899999999999988764
No 265
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.00 E-value=17 Score=33.60 Aligned_cols=64 Identities=11% Similarity=0.229 Sum_probs=42.0
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.|++..+ +|+|+|.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 98 ~grvpViaGvg~~-st~eai~la~~A~~----~Gadavlv~--------~P~-Y~~~s-~~~l~~~f~~VA~a~~lPiil 162 (343)
T 2v9d_A 98 DRRVPVLIGTGGT-NARETIELSQHAQQ----AGADGIVVI--------NPY-YWKVS-EANLIRYFEQVADSVTLPVML 162 (343)
T ss_dssp TTSSCEEEECCSS-CHHHHHHHHHHHHH----HTCSEEEEE--------CCS-SSCCC-HHHHHHHHHHHHHTCSSCEEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHHh----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4577899999974 66666766666555 699987653 122 21222 344 55677888888999874
No 266
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=84.90 E-value=21 Score=34.44 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=62.5
Q ss_pred hcceecccCCc--c-CCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCC--------CC
Q 022892 106 VADIIQIPAFL--C-RQTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTM--------FG 171 (290)
Q Consensus 106 ~~d~~kIgs~~--~-~n~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-~~gs~--------~~ 171 (290)
.+|++-|.+.. . ...++++++.+. +.||+.++= . +.++...+. ..|-+-|.+. +.|+. .+
T Consensus 267 G~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-~-t~~~a~~l~----~aGad~I~vg~~~G~~~~t~~~~~~g 340 (514)
T 1jcn_A 267 GVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-V-TAAQAKNLI----DAGVDGLRVGMGCGSICITQEVMACG 340 (514)
T ss_dssp TCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-C-SHHHHHHHH----HHTCSEEEECSSCSCCBTTBCCCSCC
T ss_pred CCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-c-hHHHHHHHH----HcCCCEEEECCCCCcccccccccCCC
Confidence 57888773332 2 124667777665 899998643 3 677765544 4676555551 11211 01
Q ss_pred CCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCC
Q 022892 172 YNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 245 (290)
Q Consensus 172 y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~ 245 (290)
.+. ..++..+..+++ .++||+.+..=.. ..-+..|+++||+++++=+-|.-
T Consensus 341 ~~~-~~~~~~~~~~~~~~~ipVia~GGI~~----------------------~~di~kala~GAd~V~iG~~~l~ 392 (514)
T 1jcn_A 341 RPQ-GTAVYKVAEYARRFGVPIIADGGIQT----------------------VGHVVKALALGASTVMMGSLLAA 392 (514)
T ss_dssp CCH-HHHHHHHHHHHGGGTCCEEEESCCCS----------------------HHHHHHHHHTTCSEEEESTTTTT
T ss_pred ccc-hhHHHHHHHHHhhCCCCEEEECCCCC----------------------HHHHHHHHHcCCCeeeECHHHHc
Confidence 110 112334445555 6899987532211 23344678899999999886644
No 267
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=84.85 E-value=3.6 Score=36.97 Aligned_cols=74 Identities=14% Similarity=0.018 Sum_probs=55.5
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHh-hhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVG-KVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~-~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+++++++|++-.. .+.+.+. +.+|++-|....-.+.++..++.+.||+|++.+.++.+.+|....++..++.|
T Consensus 39 ~~~~~~~~~~~~~~-----~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g 113 (325)
T 2ho3_A 39 AATFASRYQNIQLF-----DQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNN 113 (325)
T ss_dssp HHHHGGGSSSCEEE-----SCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCeEe-----CCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcC
Confidence 44566778863221 1233333 47999999999988889999999999999999999889998888777655543
No 268
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=84.74 E-value=5.5 Score=36.39 Aligned_cols=86 Identities=17% Similarity=0.135 Sum_probs=57.1
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCC----------CCChhHHHHHHHHHHHh
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFR----------GPGMVEGLKILEKVKIA 85 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~----------g~~~~~~l~~L~~~~~~ 85 (290)
..-|+||.|..+-.-+.-.+-+.|++ +|+..| +.| .+...++ +++ .+...++-+.|++
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~----~Gf~Gv--~N~-----ptvglidG~fr~~LEE~gm~-~~~eve~I~~A~~ 161 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKE----IGFAGV--QNF-----PTVGLIDGLFRQNLEETGMS-YAQEVEMIAEAHK 161 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHH----HTCCEE--EEC-----SCGGGCCHHHHHHHHHTTCC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHH----hCCceE--EEC-----CCcccccchhhhhHhhcCCC-HHHHHHHHHHHHH
Confidence 45688898887532222222266666 599888 433 3333222 333 2445567778899
Q ss_pred cCCcEEEeecCcccHHHHhh-hcceeccc
Q 022892 86 YDIPIVTDVHETVQCEEVGK-VADIIQIP 113 (290)
Q Consensus 86 ~Gi~~~s~~~d~~~~~~l~~-~~d~~kIg 113 (290)
+|+..+.-+|+++++..+.+ .+|++-+=
T Consensus 162 ~gL~Ti~~v~~~eeA~amA~agpDiI~~h 190 (286)
T 2p10_A 162 LDLLTTPYVFSPEDAVAMAKAGADILVCH 190 (286)
T ss_dssp TTCEECCEECSHHHHHHHHHHTCSEEEEE
T ss_pred CCCeEEEecCCHHHHHHHHHcCCCEEEEC
Confidence 99999999999999999988 68887653
No 269
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=84.69 E-value=16 Score=33.06 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=54.6
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++..+ +|+|++.-. .|+ |..+. +++ +...+++++..++|++-
T Consensus 79 ~grvpViaGvg~~-st~~ai~la~~A~~----~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~va~a~~lPiil 143 (306)
T 1o5k_A 79 DGKIPVIVGAGTN-STEKTLKLVKQAEK----LGANGVLVV--------TPY-YNKPT-QEGLYQHYKYISERTDLGIVV 143 (306)
T ss_dssp TTSSCEEEECCCS-CHHHHHHHHHHHHH----HTCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHTTCSSCEEE
T ss_pred CCCCeEEEcCCCc-cHHHHHHHHHHHHh----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhCCCCEEE
Confidence 3567799999974 56666666665554 699987653 122 22223 344 55677888888999874
Q ss_pred e--------ecCcccHHHHh-h--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVG-K--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~-~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|. + .+-.+|-.+.++.++
T Consensus 144 Yn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~ 182 (306)
T 1o5k_A 144 YNVPGRTGVNVLPETAARIAADLKNVVGIXEANPDIDQI 182 (306)
T ss_dssp EECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHH
T ss_pred EeCccccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHH
Confidence 1 13444444444 3 244566666665443
No 270
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=84.59 E-value=11 Score=34.63 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=37.2
Q ss_pred HHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEe
Q 022892 124 VAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 195 (290)
Q Consensus 124 ~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~--~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D 195 (290)
+.+..+++||++-++-.-.-.+ .++++++.|.+ +++++||.-+ . ++.....+-+.|+-|+||
T Consensus 175 ~~A~~~glPViiH~r~g~~a~~---~l~iL~e~~~~~~~vvi~H~~~s--~-----~~e~a~~~l~~G~~i~~~ 238 (330)
T 3pnz_A 175 RAHHETKAPIHSHTEAGTMALE---QIEILKQENIPLEYLSIGHMDRN--L-----DPYYHKQVAKTGAFMSFD 238 (330)
T ss_dssp HHHHHHCCCEEEECGGGCCHHH---HHHHHHHTTCCGGGEEETTGGGS--C-----CHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHCCeEEEeCCCCcChHH---HHHHHHHcCCCCCeEEEecCCCC--C-----CHHHHHHHHHcCcEEEEc
Confidence 4455789999999885311222 25667776654 6888999621 1 233333333357778885
No 271
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=84.53 E-value=23 Score=32.05 Aligned_cols=152 Identities=18% Similarity=0.159 Sum_probs=83.1
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc------------CCHHHH---HHHHh-cCC-eEEEeCC
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC------------RQTDLL---VAAAK-TGK-IINIKKG 138 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~------------~n~~lL---~~~a~-~~~-PVilstG 138 (290)
..|++...+-...++-++||..++..+++ .+|++.+|+... +-.+++ +.+++ .+. ||+.-++
T Consensus 7 ~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~p 86 (275)
T 1o66_A 7 NTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLP 86 (275)
T ss_dssp HHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECC
T ss_pred HHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 44666666666778889999999999998 699999885421 222333 44443 443 6778877
Q ss_pred CCC---CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccC
Q 022892 139 QFC---ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVAS 215 (290)
Q Consensus 139 ~~~---tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~ 215 (290)
... ++++....+..+...|- +-+=+|-+. + -...|..+.+.++||+..---+.|+... -|+-.-
T Consensus 87 fgsy~~s~~~a~~na~rl~kaGa-~aVklEdg~------e--~~~~I~al~~agIpV~gHiGLtPQs~~~----~ggf~v 153 (275)
T 1o66_A 87 FGAYQQSKEQAFAAAAELMAAGA-HMVKLEGGV------W--MAETTEFLQMRGIPVCAHIGLTPQSVFA----FGGYKV 153 (275)
T ss_dssp TTSSSSCHHHHHHHHHHHHHTTC-SEEEEECSG------G--GHHHHHHHHHTTCCEEEEEESCGGGTTC----------
T ss_pred CCCccCCHHHHHHHHHHHHHcCC-cEEEECCcH------H--HHHHHHHHHHcCCCeEeeeccCceeecc----cCCeEE
Confidence 632 46665544444444665 444556542 1 1235555655789986311111111000 000000
Q ss_pred CCC---cccHHHHHHHHHHcCCCEEEEee
Q 022892 216 GGL---RELIPCIARTAIAVGVDGVFMEV 241 (290)
Q Consensus 216 ~g~---~~~~~~~a~aAva~GA~G~~IEk 241 (290)
-|+ .+.+..=+++-..+||+++++|.
T Consensus 154 ~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 154 QGRGGKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp -----CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred EeChHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 111 12223334455678999999997
No 272
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=84.40 E-value=6.3 Score=38.43 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=79.7
Q ss_pred HHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc---CCcEEEeecCcccHHHHhh---hcceecccCCc
Q 022892 43 STKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY---DIPIVTDVHETVQCEEVGK---VADIIQIPAFL 116 (290)
Q Consensus 43 a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~---Gi~~~s~~~d~~~~~~l~~---~~d~~kIgs~~ 116 (290)
+.+.|+|.|....-.. .+.+..++++.++. .+.+++-+-.++.++-+.+ ..|.+-||.+|
T Consensus 181 ~l~~gvD~I~lsfV~s--------------aeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargD 246 (470)
T 1e0t_A 181 GCEQGVDFVAASFIRK--------------RSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGD 246 (470)
T ss_dssp HHHHTCSEEEESSCCS--------------HHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHH
T ss_pred HHHcCCCEEEECCCCC--------------HHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchH
Confidence 3346999988753221 47788899998776 5899999988887766655 58999998887
Q ss_pred c-----------CCHHHHHHHHhcCCeEEEeCCCCC--------CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC
Q 022892 117 C-----------RQTDLLVAAAKTGKIINIKKGQFC--------ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV 177 (290)
Q Consensus 117 ~-----------~n~~lL~~~a~~~~PVilstG~~~--------tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~ 177 (290)
+ -+..+++++-..||||+.-|-|-- |=.|+-+.+..+. .|.+-++|---+..-.||.
T Consensus 247 Lgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~-dG~DavMLSgETA~G~yPv--- 322 (470)
T 1e0t_A 247 LGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAIL-DGTDAVMLSGESAKGKYPL--- 322 (470)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHH-HTCSEEEECCC------CH---
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhh-cCccEEEecccccCCCCHH---
Confidence 6 233456667778999999887642 4467777777665 3665555522222223775
Q ss_pred CchhHHHHH
Q 022892 178 DPRNLEWMR 186 (290)
Q Consensus 178 dL~~i~~lk 186 (290)
.++.+|.
T Consensus 323 --eaV~~m~ 329 (470)
T 1e0t_A 323 --EAVSIMA 329 (470)
T ss_dssp --HHHHHHH
T ss_pred --HHHHHHH
Confidence 4555553
No 273
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.35 E-value=20 Score=32.91 Aligned_cols=88 Identities=14% Similarity=0.142 Sum_probs=53.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||||.++. |...+++.|++..+ +|+|+|.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 101 ~grvpViaGvg~~-st~eai~la~~A~~----~Gadavlv~--------~P~-Y~~~s-~~~l~~~f~~VA~a~~lPiil 165 (332)
T 2r8w_A 101 RGRRTLMAGIGAL-RTDEAVALAKDAEA----AGADALLLA--------PVS-YTPLT-QEEAYHHFAAVAGATALPLAI 165 (332)
T ss_dssp TTSSEEEEEECCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCC-SSCCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHHh----cCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4578899999974 56666666665544 699987653 122 22233 344 55677888888999884
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCc
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFL 116 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~ 116 (290)
= .++++.+..|.+ .+-.+|-++++
T Consensus 166 Yn~P~~tg~~l~~e~~~~La~~pnIvgiKdssgd 199 (332)
T 2r8w_A 166 YNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLPA 199 (332)
T ss_dssp ECCHHHHCCCCCHHHHHHHHTSTTEEEEEECCCT
T ss_pred EeCccccCcCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 1 133344444443 24456666665
No 274
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=84.33 E-value=9.5 Score=35.21 Aligned_cols=92 Identities=12% Similarity=-0.027 Sum_probs=60.7
Q ss_pred CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC---CCCCCCCchhHHHHHh-cCCCEEEeCCCC
Q 022892 130 GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMFG---YNDLIVDPRNLEWMRE-ANCPVVADVTHS 199 (290)
Q Consensus 130 ~~PVilstG~------~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~---y~~~~~dL~~i~~lk~-~~~pV~~D~sHs 199 (290)
++||.++-.. ..+++|....++.+...|-.-|++...+.... +.....++..+..+|+ +++||+....-.
T Consensus 219 d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~ 298 (349)
T 3hgj_A 219 ELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLIT 298 (349)
T ss_dssp TSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCC
T ss_pred CceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCC
Confidence 6799998765 23789999999999888866555543222110 1112246667788888 899998732211
Q ss_pred CCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 200 LQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 200 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
. +..+..+++.| ||++++=+.+
T Consensus 299 -----------------t-----~e~a~~~l~~G~aD~V~iGR~~ 321 (349)
T 3hgj_A 299 -----------------T-----PEQAETLLQAGSADLVLLGRVL 321 (349)
T ss_dssp -----------------C-----HHHHHHHHHTTSCSEEEESTHH
T ss_pred -----------------C-----HHHHHHHHHCCCceEEEecHHH
Confidence 1 55677788888 9988877654
No 275
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=84.33 E-value=1.7 Score=42.84 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=81.4
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc--CCcEEEeecCcccHHHHhh---hcceecccCC
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY--DIPIVTDVHETVQCEEVGK---VADIIQIPAF 115 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~--Gi~~~s~~~d~~~~~~l~~---~~d~~kIgs~ 115 (290)
+.+.+.|+|+|....-.. .+.+..++++..+. .+.+++-+-.++.++-+.+ ..|-+-||-+
T Consensus 215 ~f~~~~~vD~Ia~SFVr~--------------a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRG 280 (511)
T 3gg8_A 215 NFGIPMGCNFIAASFVQS--------------ADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARG 280 (511)
T ss_dssp HTTTTTTCCEEEETTCCS--------------HHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHH
T ss_pred HHHHHcCCCEEEEcCCCC--------------HHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecc
Confidence 456677999887753321 47788999988765 4889999988888765555 4788888877
Q ss_pred cc-----------CCHHHHHHHHhcCCeEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC
Q 022892 116 LC-----------RQTDLLVAAAKTGKIINIKKGQF--------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND 174 (290)
Q Consensus 116 ~~-----------~n~~lL~~~a~~~~PVilstG~~--------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~ 174 (290)
|+ -|-.+++.+-..||||++-|-|- .|=.|+-..+..+. .|-+-++|---+..-.||.
T Consensus 281 DLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~-dGaDavMLSgETA~G~yPv 357 (511)
T 3gg8_A 281 DLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVL-DGTDCVMLSGETANGEFPV 357 (511)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHH-HTCSEEEESHHHHTCSCHH
T ss_pred hhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCHH
Confidence 66 34456677778999999966552 36678877777765 3555555522222223764
No 276
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=84.04 E-value=3.6 Score=38.39 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=54.4
Q ss_pred HHHHHcCCCEEeccc-cccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC--cccHHHHhh-hcceecccCC-
Q 022892 41 SISTKVGLPLVFKSS-FDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE--TVQCEEVGK-VADIIQIPAF- 115 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~-~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d--~~~~~~l~~-~~d~~kIgs~- 115 (290)
+.++++|+.+|+-=. -.++.|. |.|...-...+.+++..+...||++.-.|- ...++.+.. .+|++-+...
T Consensus 31 ~~ae~aGA~aI~~l~~v~~d~~~----~~G~arm~~p~~i~~I~~av~iPV~~K~rig~~~e~qilea~GaD~Id~s~~l 106 (330)
T 2yzr_A 31 QIAEEAGAVAVMALERVPADIRA----AGGVARMSDPALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVL 106 (330)
T ss_dssp HHHHHHTCSEEEECSSCHHHHC------CCCCCCCCHHHHHHHHHHCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETTS
T ss_pred HHHHHcCCCEEEecCCccccccC----CcchhhcCCHHHHHHHHHhcCCCeEEEEeecchHHHHHHHHcCCCEEehhccC
Confidence 444557999984311 0011222 444222245666777777889999997776 666676766 5888754321
Q ss_pred --------------------ccCCHH-HHHHHHhcCCeEEEeCC
Q 022892 116 --------------------LCRQTD-LLVAAAKTGKIINIKKG 138 (290)
Q Consensus 116 --------------------~~~n~~-lL~~~a~~~~PVilstG 138 (290)
.++|+. .++.+ ..|--+|=-+|
T Consensus 107 ~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~g 149 (330)
T 2yzr_A 107 TQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKG 149 (330)
T ss_dssp CCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECC
T ss_pred CHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccC
Confidence 123443 45555 67888888888
No 277
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=83.95 E-value=12 Score=34.46 Aligned_cols=100 Identities=16% Similarity=0.025 Sum_probs=65.7
Q ss_pred HHHHHH-hcCCeEEEeCCCC------CCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CC-CCCCCCchhHHHHHh-cCCC
Q 022892 122 LLVAAA-KTGKIINIKKGQF------CASSVMVNSAEKVRLAGNPNVMVCERGTMF-GY-NDLIVDPRNLEWMRE-ANCP 191 (290)
Q Consensus 122 lL~~~a-~~~~PVilstG~~------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y-~~~~~dL~~i~~lk~-~~~p 191 (290)
+++++- ..+.||.++-... .+.++....++.+...|-.-|++...+... .. .....++..+..+|+ .++|
T Consensus 200 iv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iP 279 (340)
T 3gr7_A 200 VIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIP 279 (340)
T ss_dssp HHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCc
Confidence 444442 3488999988753 368889999999998887666654332211 11 112246667788888 8999
Q ss_pred EEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 192 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 192 V~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
|+....-. . +..+..++..| ||++++=+.+
T Consensus 280 Vi~~GgI~-----------------s-----~e~a~~~L~~G~aD~V~iGR~~ 310 (340)
T 3gr7_A 280 TGAVGLIT-----------------S-----GWQAEEILQNGRADLVFLGREL 310 (340)
T ss_dssp EEEESSCC-----------------C-----HHHHHHHHHTTSCSEEEECHHH
T ss_pred EEeeCCCC-----------------C-----HHHHHHHHHCCCeeEEEecHHH
Confidence 98732211 1 56677788888 9998887765
No 278
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=83.90 E-value=4.9 Score=38.10 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhcCCcEEEeecC--cccHHHHhh--hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHE--TVQCEEVGK--VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d--~~~~~~l~~--~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A 149 (290)
+..+.+.+...++|++-. .+++ ..+.+.+.+ .+|++-|.+-.-.+.++..++.+.||+|++.+.++.|++|....
T Consensus 56 ~~~~~~a~~~~~~g~~~~-~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l 134 (444)
T 2ixa_A 56 YMVGRAQEILKKNGKKPA-KVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDY 134 (444)
T ss_dssp HHHHHHHHHHHHTTCCCC-EEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC-ceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHH
Confidence 344555554556786421 1222 335555543 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 022892 150 AEKVRLAGN 158 (290)
Q Consensus 150 ve~i~~~Gn 158 (290)
++..++.|.
T Consensus 135 ~~~a~~~g~ 143 (444)
T 2ixa_A 135 VKVSEQTGV 143 (444)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhCC
Confidence 887776653
No 279
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=83.87 E-value=13 Score=34.14 Aligned_cols=138 Identities=13% Similarity=0.089 Sum_probs=70.5
Q ss_pred hhcCCCCeEEEEcc-CCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC---Cc------------ccCCCCChh
Q 022892 10 QLKAAEPFFLLAGP-NVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT---SS------------KSFRGPGMV 73 (290)
Q Consensus 10 ~i~~~~~~~iIAgp-csien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt---s~------------~~~~g~~~~ 73 (290)
.+...+|+.+=||+ +- | .|+.+.+.+ +|+-+|--.+.+..|+. .| ..|...|.+
T Consensus 43 Gl~f~NPvglAaG~~~~--~----~e~~~~l~~----~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~ 112 (354)
T 3tjx_A 43 NNTFANPFMNAAGVMCT--T----TEELVAMTE----SASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFD 112 (354)
T ss_dssp TEEESSSEEECTTSSCS--S----HHHHHHHHH----SSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHH
T ss_pred CEEcCCCcEEccCCCCC--C----HHHHHHHHH----cCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHH
Confidence 44566776655574 32 2 345555544 47555443343322332 11 123333434
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCccc------HHHHh----hhcceecc--cC------Ccc-CCHHHH----HHH-Hhc
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQ------CEEVG----KVADIIQI--PA------FLC-RQTDLL----VAA-AKT 129 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~------~~~l~----~~~d~~kI--gs------~~~-~n~~lL----~~~-a~~ 129 (290)
..++.+.+......+|++..+.-... +..+. +.+|++-| ++ +.+ .+.+++ +++ ...
T Consensus 113 ~~~~~~~~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~ 192 (354)
T 3tjx_A 113 FYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY 192 (354)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHh
Confidence 44555655556668899988864321 11121 23455432 22 122 344443 333 246
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+|+.+|.....+..++...++.+...+
T Consensus 193 ~~pv~vK~~p~~~~~~~~~~~~~~~~~~ 220 (354)
T 3tjx_A 193 PHSFGVKMPPYFDFAAFDAAAEILNEFP 220 (354)
T ss_dssp CSCEEEEECCCCSHHHHHHHHHHHHTCT
T ss_pred hcccccccCCCCCchhHHHHHHHHHhhc
Confidence 8899999998877777766666655443
No 280
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=83.66 E-value=5.4 Score=36.27 Aligned_cols=64 Identities=19% Similarity=0.247 Sum_probs=42.5
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |....++.+++..+ +|+|+|... .|+.| .+. +++ +...+++++..++|++-
T Consensus 82 ~grvpviaGvg~~-~t~~ai~la~~a~~----~Gadavlv~--------~P~y~-~~s-~~~l~~~f~~va~a~~lPiil 146 (304)
T 3l21_A 82 GDRARVIAGAGTY-DTAHSIRLAKACAA----EGAHGLLVV--------TPYYS-KPP-QRGLQAHFTAVADATELPMLL 146 (304)
T ss_dssp TTTSEEEEECCCS-CHHHHHHHHHHHHH----HTCSEEEEE--------CCCSS-CCC-HHHHHHHHHHHHTSCSSCEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHHHHHH----cCCCEEEEC--------CCCCC-CCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 4678899999864 66666666666555 699987653 12212 222 344 55677888888999874
No 281
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.51 E-value=14 Score=32.26 Aligned_cols=167 Identities=10% Similarity=0.059 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCCE----EeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCccc-HHHHhh
Q 022892 33 MRMAKHIKSISTKVGLPL----VFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQ-CEEVGK 105 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~----V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~-~~~l~~ 105 (290)
.++.+.+..+ +.|++. |+-..|-+ . -.+| ...++.+++++ ++++-+ -+.||+. ++.+.+
T Consensus 13 ~~l~~~i~~~--~~gad~lHvDvmDG~fvp------n--~t~G-~~~v~~lr~~~---~~~~dvhLmv~dp~~~i~~~~~ 78 (231)
T 3ctl_A 13 LKFKEQIEFI--DSHADYFHIDIMDGHFVP------N--LTLS-PFFVSQVKKLA---TKPLDCHLMVTRPQDYIAQLAR 78 (231)
T ss_dssp GGHHHHHHHH--HTTCSCEEEEEECSSSSS------C--CCBC-HHHHHHHHTTC---CSCEEEEEESSCGGGTHHHHHH
T ss_pred hhHHHHHHHH--HcCCCEEEEEEEeCccCc------c--chhc-HHHHHHHHhcc---CCcEEEEEEecCHHHHHHHHHH
Confidence 3445555554 679886 34444431 1 1123 24455555543 444433 3345544 555555
Q ss_pred -hcceecccCCc-cCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCC---CCc
Q 022892 106 -VADIIQIPAFL-CRQT-DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLI---VDP 179 (290)
Q Consensus 106 -~~d~~kIgs~~-~~n~-~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~---~dL 179 (290)
.+|++-+-... ..+. .+++.+-+.|+-+++.-.+. |+.|.... +.. +- +.+++-. ..+++.... --+
T Consensus 79 aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~-tp~~~~~~---~l~-~~-D~Vlvms-V~pGfggQ~f~~~~l 151 (231)
T 3ctl_A 79 AGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPE-TPVEAMKY---YIH-KA-DKITVMT-VDPGFAGQPFIPEML 151 (231)
T ss_dssp HTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTT-CCGGGGTT---TGG-GC-SEEEEES-SCTTCSSCCCCTTHH
T ss_pred cCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECC-CcHHHHHH---HHh-cC-CEEEEee-eccCcCCccccHHHH
Confidence 68988877666 4433 46677778899888887777 66444332 221 33 4454322 222222211 123
Q ss_pred hhHHHHHh-c-----CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEe-eeC
Q 022892 180 RNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME-VHD 243 (290)
Q Consensus 180 ~~i~~lk~-~-----~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE-kH~ 243 (290)
.-+..+|+ . +++|.+|..=. +.-+..++.+|||++++= +-+
T Consensus 152 ~kI~~lr~~~~~~~~~~~I~VdGGI~-----------------------~~~~~~~~~aGAd~~V~G~sai 199 (231)
T 3ctl_A 152 DKLAELKAWREREGLEYEIEVDGSCN-----------------------QATYEKLMAAGADVFIVGTSGL 199 (231)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEESCCS-----------------------TTTHHHHHHHTCCEEEECTTTT
T ss_pred HHHHHHHHHHhccCCCceEEEECCcC-----------------------HHHHHHHHHcCCCEEEEccHHH
Confidence 44555554 2 57787763211 122445677899998887 654
No 282
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=83.26 E-value=2.8 Score=38.42 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=57.5
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|++-...++ .+.+.+ .+ .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 44 ~~~~a~~~~~~~~~~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~ 121 (362)
T 1ydw_A 44 AKAFATANNYPESTKIH--GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEAN 121 (362)
T ss_dssp HHHHHHHTTCCTTCEEE--SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCeee--CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 45677888863111111 234444 43 699999999988889999999999999999999999999988888876654
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 122 g 122 (362)
T 1ydw_A 122 G 122 (362)
T ss_dssp T
T ss_pred C
Confidence 3
No 283
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=83.22 E-value=5.4 Score=35.69 Aligned_cols=74 Identities=18% Similarity=0.081 Sum_probs=55.4
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|++- .+ .+.+.+ .+ .+|++-|....-...++..++.+.||+|++.+.++.+.+|....++..++.
T Consensus 38 ~~~~~~~~g~~~---~~--~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~ 112 (332)
T 2glx_A 38 GAAYATENGIGK---SV--TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREA 112 (332)
T ss_dssp HHHHHHHTTCSC---CB--SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc---cc--CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 445667788751 11 234444 43 599999999988888888888889999999999888999988877765554
Q ss_pred C
Q 022892 157 G 157 (290)
Q Consensus 157 G 157 (290)
|
T Consensus 113 g 113 (332)
T 2glx_A 113 G 113 (332)
T ss_dssp T
T ss_pred C
Confidence 4
No 284
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=83.20 E-value=19 Score=32.27 Aligned_cols=80 Identities=21% Similarity=0.243 Sum_probs=52.7
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCcc
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKL 208 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~ 208 (290)
...|||.||.- |.+|+..|++.....|-+ ++...|-|.+.. ..+..+..|++ .+.+|++=
T Consensus 160 ~lKVIlEt~~L-t~eei~~A~~ia~eaGAD---fVKTSTGf~~~G--AT~edV~lm~~~vg~~v~VK------------- 220 (260)
T 3r12_A 160 VVKVIIETCYL-DTEEKIAACVISKLAGAH---FVKTSTGFGTGG--ATAEDVHLMKWIVGDEMGVK------------- 220 (260)
T ss_dssp EEEEECCGGGC-CHHHHHHHHHHHHHTTCS---EEECCCSSSSCC--CCHHHHHHHHHHHCTTSEEE-------------
T ss_pred cEEEEEeCCCC-CHHHHHHHHHHHHHhCcC---EEEcCCCCCCCC--CCHHHHHHHHHHhCCCceEE-------------
Confidence 34689999977 999999999999888863 333333232222 35667888888 66666662
Q ss_pred CCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 209 DGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 209 ~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
.++|.|.. .-+.+-+.+||+
T Consensus 221 -----aAGGIrt~--~~al~mi~aGA~ 240 (260)
T 3r12_A 221 -----ASGGIRTF--EDAVKMIMYGAD 240 (260)
T ss_dssp -----EESSCCSH--HHHHHHHHTTCS
T ss_pred -----EeCCCCCH--HHHHHHHHcCCc
Confidence 23455544 334455888997
No 285
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=83.17 E-value=29 Score=32.17 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
++++....++.+...|-.-|.+..++.. +.+. .++..+..+|+ +++||+....-+
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~-~~~~--~~~~~~~~v~~~~~iPvi~~Ggit--------------------- 304 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLA-GGKP--YSEAFRQKVRERFHGVIIGAGAYT--------------------- 304 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTT-BCCC--CCHHHHHHHHHHCCSEEEEESSCC---------------------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCccc-CCCc--ccHHHHHHHHHHCCCCEEEECCcC---------------------
Confidence 6777777788888888666665443321 1111 24566777888 889998732221
Q ss_pred cHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 221 LIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 221 ~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+..+..+++.| ||++++=+-+
T Consensus 305 --~~~a~~~l~~g~aD~V~~gR~~ 326 (364)
T 1vyr_A 305 --AEKAEDLIGKGLIDAVAFGRDY 326 (364)
T ss_dssp --HHHHHHHHHTTSCSEEEESHHH
T ss_pred --HHHHHHHHHCCCccEEEECHHH
Confidence 55677778888 9998887655
No 286
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=83.10 E-value=2.5 Score=38.25 Aligned_cols=52 Identities=13% Similarity=-0.025 Sum_probs=47.5
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+|++-|.+-.-.+.++.+++.+.||+|++.+.++.|++|....++..++.|
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 123 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTG 123 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHC
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 6999999999999999999999999999999999999999999888776664
No 287
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=83.09 E-value=3.3 Score=35.14 Aligned_cols=74 Identities=8% Similarity=0.061 Sum_probs=52.1
Q ss_pred HHHHHHHHhc--CCcEEEeecCcccHHHHhh-hcceecccCC-------cc----CCHHHHHHHHh-cCCeEEEeCCCCC
Q 022892 77 KILEKVKIAY--DIPIVTDVHETVQCEEVGK-VADIIQIPAF-------LC----RQTDLLVAAAK-TGKIINIKKGQFC 141 (290)
Q Consensus 77 ~~L~~~~~~~--Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~-------~~----~n~~lL~~~a~-~~~PVilstG~~~ 141 (290)
..+.+.+++. |++++.++.+++.+..+.+ .+|++.++.. +. .+.++++++.+ .+.||+..-|..
T Consensus 107 ~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~- 185 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVI- 185 (223)
T ss_dssp HHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCC-
T ss_pred HHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCC-
Confidence 3444444444 9999999999888877766 6998876432 11 23456777654 589999999998
Q ss_pred CHHHHHHHHH
Q 022892 142 ASSVMVNSAE 151 (290)
Q Consensus 142 tl~e~~~Ave 151 (290)
+.+++..+.+
T Consensus 186 ~~~~~~~~~~ 195 (223)
T 1y0e_A 186 TPDMYKRVMD 195 (223)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8998887654
No 288
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=82.57 E-value=2.5 Score=38.35 Aligned_cols=53 Identities=13% Similarity=-0.002 Sum_probs=48.3
Q ss_pred hhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 105 KVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 105 ~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
+.+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|....++..++.|
T Consensus 72 ~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 124 (318)
T 3oa2_A 72 TALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETD 124 (318)
T ss_dssp TSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHT
T ss_pred CCCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 36999999999999999999999999999999999999999999988777764
No 289
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=82.43 E-value=12 Score=34.66 Aligned_cols=67 Identities=9% Similarity=-0.025 Sum_probs=51.0
Q ss_pred HhcCCcEEEeecCcccHHHHhh-hcceecc-cC------Cc-----------cCCHHHHHHHHh-cCCeEEEeCCCCCCH
Q 022892 84 IAYDIPIVTDVHETVQCEEVGK-VADIIQI-PA------FL-----------CRQTDLLVAAAK-TGKIINIKKGQFCAS 143 (290)
Q Consensus 84 ~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kI-gs------~~-----------~~n~~lL~~~a~-~~~PVilstG~~~tl 143 (290)
++.|++++.++.+++.+..+.+ .+|++.+ |. .. .....+++++.+ .+.||+..-|.. +.
T Consensus 142 ~~~g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~-~~ 220 (369)
T 3bw2_A 142 RRAGTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIM-RG 220 (369)
T ss_dssp HHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCC-SH
T ss_pred HHCCCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCC-CH
Confidence 4579999999999888877766 6999988 31 11 223677877754 689999999988 89
Q ss_pred HHHHHHHH
Q 022892 144 SVMVNSAE 151 (290)
Q Consensus 144 ~e~~~Ave 151 (290)
+++..+++
T Consensus 221 ~~~~~~l~ 228 (369)
T 3bw2_A 221 GQIAAVLA 228 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887754
No 290
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=82.38 E-value=6.3 Score=35.49 Aligned_cols=73 Identities=15% Similarity=0.054 Sum_probs=54.8
Q ss_pred HHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
++++++++|++... .+.+. +.+ .+|++-|.+..-...++...+.+.||+|++.+.++.+++|....++..++.
T Consensus 47 ~~~~a~~~g~~~~~-----~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~ 121 (346)
T 3cea_A 47 LEWAKNELGVETTY-----TNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp HHHHHHTTCCSEEE-----SCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhC
Confidence 44567788885222 12343 443 699999999988888888888888999999998888999988877766544
No 291
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=82.37 E-value=2.6 Score=40.03 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=56.2
Q ss_pred HHHHHHhcCCc---EEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcC------CeEEEeCCCCCCHHHHH
Q 022892 79 LEKVKIAYDIP---IVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTG------KIINIKKGQFCASSVMV 147 (290)
Q Consensus 79 L~~~~~~~Gi~---~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~------~PVilstG~~~tl~e~~ 147 (290)
.+++++++|++ +.+ +.+. +.+ .+|++-|..-.-.+.++..++.+.| |+|++.+.++.+++|..
T Consensus 63 ~~~~a~~~g~~~~~~~~------~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~ 136 (438)
T 3btv_A 63 SIATIQRLKLSNATAFP------TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAE 136 (438)
T ss_dssp HHHHHHHTTCTTCEEES------SHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHH
T ss_pred HHHHHHHcCCCcceeeC------CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHH
Confidence 45667788886 322 3344 444 6999999999888888888888889 99999999999999988
Q ss_pred HHHHHHHHc
Q 022892 148 NSAEKVRLA 156 (290)
Q Consensus 148 ~Ave~i~~~ 156 (290)
..++..++.
T Consensus 137 ~l~~~a~~~ 145 (438)
T 3btv_A 137 SIYKAAAER 145 (438)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 888765544
No 292
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=82.35 E-value=2.6 Score=38.72 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=47.8
Q ss_pred HHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 102 EVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 102 ~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+++ .+|++-|..-.-.+.++..++.+.||+|++.+.++.|++|....++..++.|
T Consensus 60 ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 116 (362)
T 3fhl_A 60 LTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKG 116 (362)
T ss_dssp HHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 3444 5999999999999999999999999999999999999999988887655543
No 293
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=82.32 E-value=2.9 Score=39.71 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=54.8
Q ss_pred HHHHHHhcCCcEEEeecCcccHHH-Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~-l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
.+++++++|++-. .+.-..+.+. +.+ .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 122 ~~~~a~~~g~~~~-~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 200 (433)
T 1h6d_A 122 AKIVAAEYGVDPR-KIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAA 200 (433)
T ss_dssp HHHHHHHTTCCGG-GEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcc-cccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHh
Confidence 4566777887520 0001122333 333 699999999998999999999999999999999998999887777654443
No 294
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=82.22 E-value=29 Score=31.41 Aligned_cols=155 Identities=18% Similarity=0.171 Sum_probs=88.3
Q ss_pred HHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc------------CCHHHH---HHHHhc--CCeEEEeC
Q 022892 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC------------RQTDLL---VAAAKT--GKIINIKK 137 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~------------~n~~lL---~~~a~~--~~PVilst 137 (290)
+..|++..++-...++-++||..++..+++ .+|++-+|+... +=.+++ +.+.+. ..||+.--
T Consensus 18 ~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~ 97 (275)
T 3vav_A 18 VPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADL 97 (275)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred HHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEec
Confidence 556667666667788889999999999988 699999885531 222333 455543 35788765
Q ss_pred CC--CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccC
Q 022892 138 GQ--FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVAS 215 (290)
Q Consensus 138 G~--~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~ 215 (290)
.. ..++++....+..+.+.|- +-+=+|-+.. -...+..|.+.|+||+. |.-..|-.... .|+-.-
T Consensus 98 pfgsY~s~~~a~~~a~rl~kaGa-~aVklEdg~~--------~~~~i~~l~~~GIpv~g---HlgltPq~~~~-~gg~~v 164 (275)
T 3vav_A 98 PFGTYGTPADAFASAVKLMRAGA-QMVKFEGGEW--------LAETVRFLVERAVPVCA---HVGLTPQSVHA-FGGFKV 164 (275)
T ss_dssp CTTSCSSHHHHHHHHHHHHHTTC-SEEEEECCGG--------GHHHHHHHHHTTCCEEE---EEESCGGGHHH-HC---C
T ss_pred CCCCCCCHHHHHHHHHHHHHcCC-CEEEECCchh--------HHHHHHHHHHCCCCEEE---ecCCCceEEec-cCCeEE
Confidence 54 2588886555554555675 3444665531 12466667678999964 42000100000 001111
Q ss_pred CCCc----ccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 216 GGLR----ELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 216 ~g~~----~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
-|+. +.+..=+++-..+||+++++|-=+
T Consensus 165 qgrt~~~a~~~i~rA~a~~eAGA~~ivlE~vp 196 (275)
T 3vav_A 165 QGKTEAGAAQLLRDARAVEEAGAQLIVLEAVP 196 (275)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCSEEEEESCC
T ss_pred EcCCHHHHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 1221 112223334456899999999643
No 295
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=82.13 E-value=2.9 Score=38.43 Aligned_cols=56 Identities=9% Similarity=0.058 Sum_probs=48.5
Q ss_pred HHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 102 EVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 102 ~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+.+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 60 ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g 116 (358)
T 3gdo_A 60 ITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKG 116 (358)
T ss_dssp HHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcC
Confidence 3444 6999999999999999999999999999999999999999998888666554
No 296
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=82.10 E-value=4.2 Score=36.39 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=50.8
Q ss_pred cHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 99 QCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 99 ~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
+.+.+ .+ .+|++-|.+-.-.+.++..++-+.||+|++.+.++.+++|....++..++.|-
T Consensus 56 ~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 56 SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp CHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 44544 43 69999999999899999999889999999999999999999999887776653
No 297
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=82.02 E-value=22 Score=32.10 Aligned_cols=130 Identities=15% Similarity=0.072 Sum_probs=79.6
Q ss_pred hhHHhhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHH
Q 022892 5 TALFNQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKI 84 (290)
Q Consensus 5 ~~~~~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~ 84 (290)
..++..|. .+.+.=--..+.|.+.....|+--+++ .|-+.||..-... +|+ . .....++-+.|+
T Consensus 55 ~~~~~~i~---~~~~lpntaG~~taeeAv~~a~lare~---~gt~~iKlEvi~d-~~~-----l----~pD~~~tv~aa~ 118 (268)
T 2htm_A 55 VGLLEALE---GVRLLPNTAGARTAEEAVRLARLGRLL---TGERWVKLEVIPD-PTY-----L----LPDPLETLKAAE 118 (268)
T ss_dssp -CHHHHTT---TSEEEEBCTTCCSHHHHHHHHHHHHHH---HCCSEEBCCCCSC-TTT-----T----CCCHHHHHHHHH
T ss_pred ccHHHHHh---hhhccCcccCCCCHHHHHHHHHhhhHh---cCcceeeeeeccC-ccc-----c----CcCHHHHHHHHH
Confidence 45666664 222222111233777777777654443 5788888766552 332 1 112334444444
Q ss_pred hc---CCcEE-EeecCcccHHHHhh-hccee-----cccCC-ccCCHHHHHHHHh-c-C-CeEEEeCCCCCCHHHHHHHH
Q 022892 85 AY---DIPIV-TDVHETVQCEEVGK-VADII-----QIPAF-LCRQTDLLVAAAK-T-G-KIINIKKGQFCASSVMVNSA 150 (290)
Q Consensus 85 ~~---Gi~~~-s~~~d~~~~~~l~~-~~d~~-----kIgs~-~~~n~~lL~~~a~-~-~-~PVilstG~~~tl~e~~~Av 150 (290)
++ |+.++ -..-|+..+..+++ .++++ -|||. -++|..+|+.+.. . + .||+.-=|.. |++++..|.
T Consensus 119 ~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~-tpsDAa~Am 197 (268)
T 2htm_A 119 RLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLG-LPSHAAEVM 197 (268)
T ss_dssp HHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCC-SHHHHHHHH
T ss_pred HHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCC-CHHHHHHHH
Confidence 44 98877 34567777777777 45544 15665 4578888888876 3 5 8999999998 999999887
Q ss_pred H
Q 022892 151 E 151 (290)
Q Consensus 151 e 151 (290)
+
T Consensus 198 e 198 (268)
T 2htm_A 198 E 198 (268)
T ss_dssp H
T ss_pred H
Confidence 6
No 298
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=81.54 E-value=6.1 Score=32.75 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=46.3
Q ss_pred HHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHH
Q 022892 150 AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIART 228 (290)
Q Consensus 150 ve~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~a 228 (290)
++.+...|...+.+...+-. +.. ..++.+.+..++. .++||+.-...+. +.-...
T Consensus 136 i~~~~~~~~~~vli~~~~~~-g~~-~g~~~~~i~~~~~~~~~Pvia~~g~~~----------------------~~~~~~ 191 (237)
T 3cwo_X 136 VVEVEKRGAGEILLTSIDRD-GTK-SGYDTEMIRFVRPLTTLPIIASGGAGK----------------------MEHFLE 191 (237)
T ss_dssp HHHHHHHTCSEEEEEETTTT-TCC-SCCCHHHHHHHGGGCCSCEEEESCCCS----------------------HHHHHH
T ss_pred HHHHhhcCCCeEEEEecCCC-Ccc-ccccHHHHHHHHHhcCCCEEecCCCCC----------------------HHHHHH
Confidence 34455556656665543221 211 1234677777777 6899977333321 333334
Q ss_pred HHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHH
Q 022892 229 AIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 265 (290)
Q Consensus 229 Ava~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv 265 (290)
+...||+|+++=+-+ +...+++.++.+.+
T Consensus 192 ~~~~G~~~~~vg~a~--------~~~~~~~~~~~~~l 220 (237)
T 3cwo_X 192 AFLAGADAALAASVF--------HFREIDVRELKEYL 220 (237)
T ss_dssp HHHHTCSEEEESHHH--------HTTSSCHHHHHHHH
T ss_pred HHHcCcHHHhhhHHH--------HcCCCCHHHHHHHH
Confidence 556899999987755 22335556655543
No 299
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=81.50 E-value=8.1 Score=34.85 Aligned_cols=93 Identities=12% Similarity=0.037 Sum_probs=53.9
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhc---CCc
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAY---DIP 89 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~---Gi~ 89 (290)
++++-||+|.++. |....++.|++. +++|+|++.-. .|+.|+.+. +++ +...+++++.. ++|
T Consensus 70 ~gr~pviaGvg~~-~t~~ai~la~~A----~~~Gadavlv~--------~P~y~~~~s-~~~l~~~f~~va~a~p~~~lP 135 (294)
T 3b4u_A 70 IAPSRIVTGVLVD-SIEDAADQSAEA----LNAGARNILLA--------PPSYFKNVS-DDGLFAWFSAVFSKIGKDARD 135 (294)
T ss_dssp CCGGGEEEEECCS-SHHHHHHHHHHH----HHTTCSEEEEC--------CCCSSCSCC-HHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCcEEEeCCCc-cHHHHHHHHHHH----HhcCCCEEEEc--------CCcCCCCCC-HHHHHHHHHHHHHhcCCCCCc
Confidence 4567799999974 556666666554 45799998753 222222133 444 55677888888 899
Q ss_pred EEEe--------ecCcccHHHHh-h--h-cceecccCCccCCH
Q 022892 90 IVTD--------VHETVQCEEVG-K--V-ADIIQIPAFLCRQT 120 (290)
Q Consensus 90 ~~s~--------~~d~~~~~~l~-~--~-~d~~kIgs~~~~n~ 120 (290)
++-= .++++.+..|. + . +-.+|-.+.++.++
T Consensus 136 iilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds~gd~~~~ 178 (294)
T 3b4u_A 136 ILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHT 178 (294)
T ss_dssp EEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEECCCCHHHH
T ss_pred EEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEECCCCHHHH
Confidence 8741 13344444444 2 2 34456566555443
No 300
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=81.14 E-value=36 Score=31.81 Aligned_cols=174 Identities=11% Similarity=0.028 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec---CcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH---ETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~---d~~~~~~l~ 104 (290)
+.+..+++|++|.++ |++.+=..+ |..++. ..+.++. ..+.++..-...| .++.++...
T Consensus 23 ~~~~k~~ia~~L~~~----Gv~~IE~g~----p~~~~~---------~~~~~~~-i~~~~~~~~v~~~~r~~~~di~~a~ 84 (382)
T 2ztj_A 23 STQDKVEIAKALDEF----GIEYIEVTT----PVASPQ---------SRKDAEV-LASLGLKAKVVTHIQCRLDAAKVAV 84 (382)
T ss_dssp CHHHHHHHHHHHHHH----TCSEEEECC----TTSCHH---------HHHHHHH-HHTSCCSSEEEEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CcCEEEEcC----CcCCHH---------HHHHHHH-HHhcCCCcEEEEEcccChhhHHHHH
Confidence 678889999999885 998775532 222222 1111222 2233333222222 233444444
Q ss_pred h-hcceecc--cCCcc-------------CC-HHHHHHHHhcC--CeEEEe--CCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 105 K-VADIIQI--PAFLC-------------RQ-TDLLVAAAKTG--KIINIK--KGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 105 ~-~~d~~kI--gs~~~-------------~n-~~lL~~~a~~~--~PVils--tG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+ .++.+-| ++.+. .+ .+.++++-+.| ..|-++ .+...+++.+.+.++.+... -..|.|
T Consensus 85 ~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 85 ETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp HTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred HcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 4 4554433 22221 11 13344555567 666665 55555788888888888777 666777
Q ss_pred EeecCCCCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 164 CERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 164 ~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
+.-... ..|.. + ..-+..+++ + ++||++ +.|-. +.+...-+.+|+.+||+ .|+
T Consensus 164 ~DT~G~-~~P~~-~-~~lv~~l~~~~~~~~~i~~-H~Hnd------------------~GlAvAN~laAv~aGa~--~vd 219 (382)
T 2ztj_A 164 ADTVGV-ATPRQ-V-YALVREVRRVVGPRVDIEF-HGHND------------------TGCAIANAYEAIEAGAT--HVD 219 (382)
T ss_dssp EETTSC-CCHHH-H-HHHHHHHHHHHTTTSEEEE-EEBCT------------------TSCHHHHHHHHHHTTCC--EEE
T ss_pred cCCCCC-CCHHH-H-HHHHHHHHHhcCCCCeEEE-EeCCC------------------ccHHHHHHHHHHHhCCC--EEE
Confidence 665542 12221 1 134555665 3 578888 77753 22335567789999998 888
Q ss_pred eeCC
Q 022892 241 VHDD 244 (290)
Q Consensus 241 kH~t 244 (290)
.=+.
T Consensus 220 ~tv~ 223 (382)
T 2ztj_A 220 TTIL 223 (382)
T ss_dssp EBGG
T ss_pred Eccc
Confidence 7664
No 301
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=81.07 E-value=3.8 Score=37.38 Aligned_cols=58 Identities=22% Similarity=0.134 Sum_probs=48.5
Q ss_pred HHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 100 CEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 100 ~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.+.+ ++ .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 59 ~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g 118 (352)
T 3kux_A 59 PQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAG 118 (352)
T ss_dssp HHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 3444 43 5999999999989999999999999999999999999999988887665543
No 302
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=80.89 E-value=2.3 Score=37.98 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=55.0
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHH-cCCCcEEEEeecCCC------CCC-CCCCCchhHHHHHh-cCCCEEEeCCCCC
Q 022892 130 GKIINIKKGQFCASSVMVNSAEKVRL-AGNPNVMVCERGTMF------GYN-DLIVDPRNLEWMRE-ANCPVVADVTHSL 200 (290)
Q Consensus 130 ~~PVilstG~~~tl~e~~~Ave~i~~-~Gn~~i~L~~~gs~~------~y~-~~~~dL~~i~~lk~-~~~pV~~D~sHs~ 200 (290)
+.|+++.-+.. +++++..+++.+.. .|-+ .+-+|.++-. .|. +...-...+..+++ .++||++=.+..+
T Consensus 98 ~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d-~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~ 175 (311)
T 1ep3_A 98 ELPIIANVAGS-EEADYVAVCAKIGDAANVK-AIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNV 175 (311)
T ss_dssp TSCEEEEECCS-SHHHHHHHHHHHTTSTTEE-EEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS
T ss_pred CCcEEEEEcCC-CHHHHHHHHHHHhccCCCC-EEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCh
Confidence 88999998877 89999999998876 5643 3444543210 010 00111345566666 5899876211111
Q ss_pred CCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 201 QQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 201 ~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
.. ...++..+..+|++++.+-
T Consensus 176 ---------------~~----~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 176 ---------------TD----IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp ---------------SC----SHHHHHHHHHTTCSEEEEC
T ss_pred ---------------HH----HHHHHHHHHHcCCCEEEEe
Confidence 01 1466778889999988873
No 303
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=80.73 E-value=11 Score=32.38 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=61.2
Q ss_pred HHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec--Cc-ccHHHHhhhcc-eecccC
Q 022892 39 IKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH--ET-VQCEEVGKVAD-IIQIPA 114 (290)
Q Consensus 39 L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~--d~-~~~~~l~~~~d-~~kIgs 114 (290)
.++.+.++|++.|...... .+....+.+.++++|+.++--+- ++ +.+..+.+.+| ++.+.+
T Consensus 100 ~~~~~~~~Gad~v~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~ 164 (248)
T 1geq_A 100 FLAEAKASGVDGILVVDLP---------------VFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVS 164 (248)
T ss_dssp HHHHHHHHTCCEEEETTCC---------------GGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHCCCCEEEECCCC---------------hhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEE
Confidence 3444445699988775322 13356778888889987665332 22 22334444466 543322
Q ss_pred C---c-------cCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 022892 115 F---L-------CRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 115 ~---~-------~~n~~lL~~~a~-~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~ 162 (290)
. . -.+.++++++.+ ++.||+..-|.. +.+++.... ..|-.-++
T Consensus 165 ~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~-~~e~i~~~~----~~Gad~vi 218 (248)
T 1geq_A 165 LYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVS-KREHVVSLL----KEGANGVV 218 (248)
T ss_dssp CC-------CCCHHHHHHHHHHHHHCSSCEEEESCCC-SHHHHHHHH----HTTCSEEE
T ss_pred CCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecC-CHHHHHHHH----HcCCCEEE
Confidence 2 1 123457777654 479999999998 878877643 35654444
No 304
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=80.60 E-value=3.8 Score=40.26 Aligned_cols=104 Identities=16% Similarity=0.207 Sum_probs=71.0
Q ss_pred HHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc--CCcEEEeecCcccHHHHhh---hcceecccCCcc-
Q 022892 44 TKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY--DIPIVTDVHETVQCEEVGK---VADIIQIPAFLC- 117 (290)
Q Consensus 44 ~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~--Gi~~~s~~~d~~~~~~l~~---~~d~~kIgs~~~- 117 (290)
.+.|+|.|....-+. .+.+..++++..+. .+.+++-+-.++.++-+.+ ..|.+-||..|+
T Consensus 203 l~~g~d~I~lpfV~s--------------aeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLg 268 (500)
T 1a3w_A 203 VKNGVHMVFASFIRT--------------ANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLG 268 (500)
T ss_dssp HHHTCSEEEECSCCS--------------HHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHH
T ss_pred HHcCCCEEEECCCCC--------------HHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhh
Confidence 345999988753321 46677777777543 5889999988888766665 478898888766
Q ss_pred ----------CCHHHHHHHHhcCCeEEE---------eCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 118 ----------RQTDLLVAAAKTGKIINI---------KKGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 118 ----------~n~~lL~~~a~~~~PVil---------stG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
-+..+++++-..||||++ .++.- |-.|+-.+...+. .|.+-++|
T Consensus 269 velg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~p-traEvsdva~av~-~G~d~vmL 331 (500)
T 1a3w_A 269 IEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRP-TRAEVSDVGNAIL-DGADCVML 331 (500)
T ss_dssp HHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSC-CHHHHHHHHHHHH-HTCSEECB
T ss_pred hhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCc-hHHHHHHHHHHHH-hCCCEEEe
Confidence 233455666778999996 44444 7777777777765 46654443
No 305
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=80.55 E-value=8.7 Score=36.97 Aligned_cols=115 Identities=18% Similarity=0.088 Sum_probs=62.7
Q ss_pred cHHHHhh-hcceecccCCcc---CCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe-ecC---
Q 022892 99 QCEEVGK-VADIIQIPAFLC---RQTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE-RGT--- 168 (290)
Q Consensus 99 ~~~~l~~-~~d~~kIgs~~~---~n~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~-~gs--- 168 (290)
.++.+.+ .+|.+.|....- ...+.++++.+. ++||+++++. +.++...+. ..|-+-|.+-- .|+
T Consensus 241 ~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~--t~e~a~~l~----~~G~d~I~v~~~~G~~~~ 314 (494)
T 1vrd_A 241 RVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVA--TPEGTEALI----KAGADAVKVGVGPGSICT 314 (494)
T ss_dssp HHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEEC--SHHHHHHHH----HTTCSEEEECSSCSTTCH
T ss_pred HHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcC--CHHHHHHHH----HcCCCEEEEcCCCCcccc
Confidence 4444444 578888754322 244566776554 7999997663 588875543 46765444411 110
Q ss_pred -C--CCCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEee
Q 022892 169 -M--FGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEV 241 (290)
Q Consensus 169 -~--~~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEk 241 (290)
. .+... -.+..++.+.+ .++||+.|.-=.. ..-+..|+++||+++++=+
T Consensus 315 ~~~~~~~g~--p~~~~l~~v~~~~~~~~ipvia~GGI~~----------------------~~di~kala~GAd~V~iGr 370 (494)
T 1vrd_A 315 TRVVAGVGV--PQLTAVMECSEVARKYDVPIIADGGIRY----------------------SGDIVKALAAGAESVMVGS 370 (494)
T ss_dssp HHHHHCCCC--CHHHHHHHHHHHHHTTTCCEEEESCCCS----------------------HHHHHHHHHTTCSEEEESH
T ss_pred ccccCCCCc--cHHHHHHHHHHHHhhcCCCEEEECCcCC----------------------HHHHHHHHHcCCCEEEECH
Confidence 0 00100 12334444433 4799988532211 2334467899999998765
Q ss_pred eC
Q 022892 242 HD 243 (290)
Q Consensus 242 H~ 243 (290)
-|
T Consensus 371 ~~ 372 (494)
T 1vrd_A 371 IF 372 (494)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 306
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=80.37 E-value=4.2 Score=39.78 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHH-HHHcCCCEEeccccccCCCCCcccCC--CCChhHHHHHHHHHHHhcCCcEEE--ee--------
Q 022892 28 SEEHIMRMAKHIKSI-STKVGLPLVFKSSFDKANRTSSKSFR--GPGMVEGLKILEKVKIAYDIPIVT--DV-------- 94 (290)
Q Consensus 28 n~~~~le~Ak~L~~~-a~~~G~~~V~~~~~~k~~rts~~~~~--g~~~~~~l~~L~~~~~~~Gi~~~s--~~-------- 94 (290)
|++..+++|..+++. -+++|...|....-+-..|...+.+. .-.+..|++.|.++.+++|+.|-- ++
T Consensus 45 ~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~rd~~G~~~~d~~kFP~Glk~Lad~ih~~GlKfGIw~~pG~~tC~~~ 124 (479)
T 3lrk_A 45 SEQLLLDTADRISDLGLKDMGYKYIILDDCWSSGRDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAGY 124 (479)
T ss_dssp CHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEEEECTTSCEEECTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSS
T ss_pred CHHHHHHHHHHHHhcCccccCceEEEECCccccccCCCCCEecChhhcCCCHHHHHHHHHHCCCeeEEEecCccccccCC
Confidence 788889999988873 23458776655433322344333221 111246899999999999999865 44
Q ss_pred -----cCcccHHHHhh-hcceecccCCccC------------CHHHHHHHHhcCCeEEEeC
Q 022892 95 -----HETVQCEEVGK-VADIIQIPAFLCR------------QTDLLVAAAKTGKIINIKK 137 (290)
Q Consensus 95 -----~d~~~~~~l~~-~~d~~kIgs~~~~------------n~~lL~~~a~~~~PVilst 137 (290)
+....++.+++ .+|++|+--.... -..+-+++.++|+||++|-
T Consensus 125 pGsl~~~~~da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL~~tGRpI~~Sl 185 (479)
T 3lrk_A 125 PGSLGREEEDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPVFYSL 185 (479)
T ss_dssp BCCTTCHHHHHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred CchhHHHHHHHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHHHHhCCCeEEEe
Confidence 22233455666 7999997543210 1134466788999999985
No 307
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=80.28 E-value=12 Score=34.78 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=59.3
Q ss_pred CCeEEEeCCCC-------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCC--CC-CCCCCchhHHHHHh-cCCCEEEeCCC
Q 022892 130 GKIINIKKGQF-------CASSVMVNSAEKVRLAGNPNVMVCERGTMFG--YN-DLIVDPRNLEWMRE-ANCPVVADVTH 198 (290)
Q Consensus 130 ~~PVilstG~~-------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~--y~-~~~~dL~~i~~lk~-~~~pV~~D~sH 198 (290)
.+||.++-... .+++|....++.+...|-.-|++...+.... .+ ....++..+..+|+ +++||+....-
T Consensus 225 d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 225 NLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp TSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSST
T ss_pred CceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCC
Confidence 57999987542 3678888888888888866565554332111 11 12245666777888 89999873221
Q ss_pred CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 199 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 199 s~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
. . +..+..++..| ||++++=+.+
T Consensus 305 ~-----------------s-----~e~a~~~l~~G~aD~V~iGR~~ 328 (363)
T 3l5l_A 305 G-----------------T-----PQLAEAALQANQLDLVSVGRAH 328 (363)
T ss_dssp T-----------------S-----HHHHHHHHHTTSCSEEECCHHH
T ss_pred C-----------------C-----HHHHHHHHHCCCccEEEecHHH
Confidence 1 1 55677788888 9988776654
No 308
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=80.24 E-value=7.5 Score=34.03 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHHHHH---HcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSIST---KVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~---~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~ 104 (290)
+.+...++...|.+.++ .+|+|+|...+-.. ..|.|.+ ...+...++.+..|+|+++... ..++.+.
T Consensus 44 t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsa------s~~~G~~--~~~~~~~~l~~~~~iPv~~~~~--A~~~al~ 113 (240)
T 3ixl_A 44 TPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSL------SFYRGAA--FNAALTVAMREATGLPCTTMST--AVLNGLR 113 (240)
T ss_dssp SHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHH------HHTTCHH--HHHHHHHHHHHHHSSCEEEHHH--HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHH------HHhcccc--hHHHHHHHHHhccCCCEECHHH--HHHHHHH
Confidence 34444444333333332 35899888753221 1122221 1223344555668999998443 2333343
Q ss_pred h-hcc-eecccCCccC-CHHHHHHHHhcCCeEEEeCCCC---------CCHHHHHHHHHH-HHHcCCCcEEEEeecCCCC
Q 022892 105 K-VAD-IIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQF---------CASSVMVNSAEK-VRLAGNPNVMVCERGTMFG 171 (290)
Q Consensus 105 ~-~~d-~~kIgs~~~~-n~~lL~~~a~~~~PVilstG~~---------~tl~e~~~Ave~-i~~~Gn~~i~L~~~gs~~~ 171 (290)
. .+. +.-++.+... +..+.+.+...|..|+...+.. .+.+++.++++. +....+-+.+++-|+-
T Consensus 114 ~~g~~rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~--- 190 (240)
T 3ixl_A 114 ALGVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGG--- 190 (240)
T ss_dssp HTTCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTT---
T ss_pred HhCCCEEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCC---
Confidence 3 222 2233343333 2233345666788776654432 146677777776 5233345778888963
Q ss_pred CCCCCCCchhHHHHHh-cCCCEEEeCC
Q 022892 172 YNDLIVDPRNLEWMRE-ANCPVVADVT 197 (290)
Q Consensus 172 y~~~~~dL~~i~~lk~-~~~pV~~D~s 197 (290)
++. +..+..+++ +++|| +|+.
T Consensus 191 l~~----l~~i~~le~~lg~PV-ids~ 212 (240)
T 3ixl_A 191 LLT----LDAIPEVERRLGVPV-VSSS 212 (240)
T ss_dssp SCC----TTHHHHHHHHHSSCE-EEHH
T ss_pred Cch----hhhHHHHHHHhCCCE-EeHH
Confidence 443 235667777 89999 7654
No 309
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=80.18 E-value=31 Score=34.29 Aligned_cols=127 Identities=18% Similarity=0.149 Sum_probs=87.9
Q ss_pred CCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEE
Q 022892 13 AAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIV 91 (290)
Q Consensus 13 ~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~ 91 (290)
..+++.+=|.++. +. ..++.++.|++ +|+|++..++-. |.. +..++.++.+.+.+ .++++
T Consensus 266 ~~grL~VgAAVgv--~~-d~~eR~~aLv~----AGvD~iviD~ah-----------Ghs-~~v~~~i~~ik~~~p~~~vi 326 (556)
T 4af0_A 266 ESKQLYCGAAIGT--RP-GDKDRLKLLAE----AGLDVVVLDSSQ-----------GNS-VYQIEFIKWIKQTYPKIDVI 326 (556)
T ss_dssp TTCCBCCEEEECS--SH-HHHHHHHHHHH----TTCCEEEECCSC-----------CCS-HHHHHHHHHHHHHCTTSEEE
T ss_pred hhhceeeEEEecc--Cc-cHHHHHHHHHh----cCCcEEEEeccc-----------ccc-HHHHHHHHHHHhhCCcceEE
Confidence 3567888888886 44 47899999998 599998765321 222 34455566665555 78887
Q ss_pred E-eecCcccHHHHhh-hcceecccCC--cc-C----------CHHHH----HHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 92 T-DVHETVQCEEVGK-VADIIQIPAF--LC-R----------QTDLL----VAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 92 s-~~~d~~~~~~l~~-~~d~~kIgs~--~~-~----------n~~lL----~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
. -+-+.+.+..|.+ .+|.+|||-+ .+ + |..-+ +++.+.+.|||--=|.. +..++..|+.
T Consensus 327 aGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~-~sGDi~KAla- 404 (556)
T 4af0_A 327 AGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIG-NIGHIAKALA- 404 (556)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCC-SHHHHHHHHH-
T ss_pred eccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcC-cchHHHHHhh-
Confidence 7 8888888888877 7999998654 11 1 12111 22345789999999998 9999988853
Q ss_pred HHHcCCCcEEE
Q 022892 153 VRLAGNPNVMV 163 (290)
Q Consensus 153 i~~~Gn~~i~L 163 (290)
.|..-++|
T Consensus 405 ---aGAd~VMl 412 (556)
T 4af0_A 405 ---LGASAVMM 412 (556)
T ss_dssp ---TTCSEEEE
T ss_pred ---cCCCEEEE
Confidence 57766664
No 310
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=79.98 E-value=38 Score=31.39 Aligned_cols=76 Identities=13% Similarity=-0.072 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
+++++...++.+...|-.-|++..+... +.+. .++..+..+|+ +++||+....-+
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~-~~~~--~~~~~~~~i~~~~~iPvi~~Ggi~--------------------- 303 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWD-DAPD--TPVSFKRALREAYQGVLIYAGRYN--------------------- 303 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTT-BCCC--CCHHHHHHHHHHCCSEEEEESSCC---------------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcC-CCCC--ccHHHHHHHHHHCCCcEEEeCCCC---------------------
Confidence 6778888888888888766665443211 1111 23456677888 889998732221
Q ss_pred cHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 221 LIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 221 ~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+..+..+++.| ||++++=+-+
T Consensus 304 --~~~a~~~l~~g~aD~V~igR~~ 325 (365)
T 2gou_A 304 --AEKAEQAINDGLADMIGFGRPF 325 (365)
T ss_dssp --HHHHHHHHHTTSCSEEECCHHH
T ss_pred --HHHHHHHHHCCCcceehhcHHH
Confidence 55677788888 9988877655
No 311
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=79.93 E-value=4.1 Score=37.46 Aligned_cols=59 Identities=14% Similarity=0.016 Sum_probs=49.4
Q ss_pred cHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 99 QCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 99 ~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
+.+.+ ++ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 58 ~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 118 (364)
T 3e82_A 58 SPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQ 118 (364)
T ss_dssp CHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhC
Confidence 34444 43 6999999999999999999999999999999999999999998888766554
No 312
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=79.90 E-value=11 Score=32.54 Aligned_cols=87 Identities=8% Similarity=-0.003 Sum_probs=51.0
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCC
Q 022892 121 DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSL 200 (290)
Q Consensus 121 ~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~ 200 (290)
+.++.+.++++||++-++.+ .+++. +++++.+...+++ ||.+. +...+..+.+.|+-+.++..-+
T Consensus 130 ~~~~la~~~~lPv~iH~~~a--~~~~~---~il~~~~~~~~v~-H~~~g--------~~~~~~~~~~~g~~i~~~g~~~- 194 (272)
T 2y1h_A 130 RQIQLAKRLNLPVNVHSRSA--GRPTI---NLLQEQGAEKVLL-HAFDG--------RPSVAMEGVRAGYFFSIPPSII- 194 (272)
T ss_dssp HHHHHHHHHTCCEEEECTTC--HHHHH---HHHHHTTCCSEEE-ETCCS--------CHHHHHHHHHTTCEEEECGGGG-
T ss_pred HHHHHHHHhCCcEEEEeCCc--HHHHH---HHHHhCCCCCEEE-EccCC--------CHHHHHHHHHCCCEEEECCccc-
Confidence 34566778899999999855 45544 5566666556666 99542 1223333434577676632111
Q ss_pred CCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 201 QQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 201 ~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
.+ ..+-..+...+.+.+++|+=
T Consensus 195 ---------------~~-----~~~~~~~~~~~~drll~eTD 216 (272)
T 2y1h_A 195 ---------------RS-----GQKQKLVKQLPLTSICLETD 216 (272)
T ss_dssp ---------------TC-----HHHHHHHHHSCGGGEEECCC
T ss_pred ---------------Cc-----HHHHHHHHhCCHHHEEEecC
Confidence 12 23333444567788899974
No 313
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=79.52 E-value=15 Score=32.70 Aligned_cols=207 Identities=11% Similarity=0.092 Sum_probs=0.0
Q ss_pred eEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcc-------------cCCCCChhHHHHHHHHHH
Q 022892 17 FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSK-------------SFRGPGMVEGLKILEKVK 83 (290)
Q Consensus 17 ~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~-------------~~~g~~~~~~l~~L~~~~ 83 (290)
+|+.||=- |.+..++.++.|.+ .|+|++-.+. |.+.|. .-.|..+.+.|++++++.
T Consensus 18 ~yitaG~P---~~~~t~~~~~~l~~----~GaD~iElGi----PfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r 86 (252)
T 3tha_A 18 AYTVLGYP---NLQTSEAFLQRLDQ----SPIDILELGV----AYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIK 86 (252)
T ss_dssp EEEETTSS---CHHHHHHHHHTGGG----SSCSEEEEEC----CCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCC
T ss_pred EEEeCCCC---CHHHHHHHHHHHHH----cCCCEEEECC----CCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHh
Q ss_pred HhcCCcEEE-eecCcc-------cHHHHhh-hcceecccCCcc-CCHHHHHHHHhcCC-eEEEeCCCCCCHHHHHHHHHH
Q 022892 84 IAYDIPIVT-DVHETV-------QCEEVGK-VADIIQIPAFLC-RQTDLLVAAAKTGK-IINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 84 ~~~Gi~~~s-~~~d~~-------~~~~l~~-~~d~~kIgs~~~-~n~~lL~~~a~~~~-PVilstG~~~tl~e~~~Ave~ 152 (290)
.+ +|++- +-+++- -++.+.+ .+|-+-|+---. ...++.+.+.+.|. +|.|-+..+ +.+.+..
T Consensus 87 ~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t-~~eRi~~---- 159 (252)
T 3tha_A 87 TK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTT-PKERVKK---- 159 (252)
T ss_dssp CS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTS-CHHHHHH----
T ss_pred cC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCC-cHHHHHH----
Q ss_pred HHHcCCCcEEEEeecCCCCCCC--CCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 022892 153 VRLAGNPNVMVCERGTMFGYND--LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 229 (290)
Q Consensus 153 i~~~Gn~~i~L~~~gs~~~y~~--~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aA 229 (290)
+.+.+..-+-++-+....+... ..--...+..+|+ +++||++ |.+... +..+..+
T Consensus 160 ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v-----------------GfGIst-----~e~a~~~ 217 (252)
T 3tha_A 160 LVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV-----------------GFGIQN-----NQDVKRM 217 (252)
T ss_dssp HHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE-----------------ESSCCS-----HHHHHHH
T ss_pred HHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE-----------------EcCcCC-----HHHHHHH
Q ss_pred HHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022892 230 IAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 230 va~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
.. +|||+++=+.+ ...-..-+++++.+.++.+++
T Consensus 218 ~~-~ADGVIVGSAi------Vk~i~~~~~~~~~~~~~~~~~ 251 (252)
T 3tha_A 218 RK-VADGVIVGTSI------VKCFKQGNLDIIMKDIEEIFK 251 (252)
T ss_dssp TT-TSSEEEECHHH------HHHTTSSCHHHHHHHHHHHC-
T ss_pred Hh-cCCEEEECHHH------HHHHHhcCHHHHHHHHHHHhh
No 314
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=79.35 E-value=23 Score=32.39 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhcCCcEEEe-e---cCcccHHHHhh-hcceecccC------------C-----------ccCCHHHHHHH
Q 022892 75 GLKILEKVKIAYDIPIVTD-V---HETVQCEEVGK-VADIIQIPA------------F-----------LCRQTDLLVAA 126 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s~-~---~d~~~~~~l~~-~~d~~kIgs------------~-----------~~~n~~lL~~~ 126 (290)
.++.++++.+..++|++.- + ++++.+..+.+ .+|++-+.. + -......|+++
T Consensus 166 ~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v 245 (349)
T 1p0k_A 166 ALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEI 245 (349)
T ss_dssp HHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHH
Confidence 4566777778889998874 2 77788877777 699888841 1 12334456666
Q ss_pred Hh-c-CCeEEEeCCCCCCHHHHHHHHH
Q 022892 127 AK-T-GKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 127 a~-~-~~PVilstG~~~tl~e~~~Ave 151 (290)
.+ . +.||+..-|.. +.+++..++.
T Consensus 246 ~~~~~~ipvia~GGI~-~~~d~~k~l~ 271 (349)
T 1p0k_A 246 RSEFPASTMIASGGLQ-DALDVAKAIA 271 (349)
T ss_dssp HHHCTTSEEEEESSCC-SHHHHHHHHH
T ss_pred HHhcCCCeEEEECCCC-CHHHHHHHHH
Confidence 54 2 78999999998 9998887754
No 315
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=79.14 E-value=35 Score=30.56 Aligned_cols=177 Identities=16% Similarity=0.143 Sum_probs=106.1
Q ss_pred CCCeEEEEccC-------CccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc
Q 022892 14 AEPFFLLAGPN-------VIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY 86 (290)
Q Consensus 14 ~~~~~iIAgpc-------sien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~ 86 (290)
.+++-||||.- .| +.+ ..++|+ .. +.|+.++-- .|-+..|+| .+..|+++++..
T Consensus 43 ~~~~~iIAEiKraSPSkg~i-~~d-p~~iA~----~~-~~GA~aiSV-------LTd~~~F~G-----s~~~L~~vr~~v 103 (258)
T 4a29_A 43 RNITAIIAVYERKSPSGLDV-ERD-PIEYAK----FM-ERYAVGLSI-------TTEEKYFNG-----SYETLRKIASSV 103 (258)
T ss_dssp TTCCCEEEEECSBCTTSCBC-CCC-HHHHHH----HH-TTTCSEEEE-------ECCSTTTCC-----CHHHHHHHHTTC
T ss_pred CCCcEEEEEEecCCCCCCCc-cCC-HHHHHH----HH-hCCCeEEEE-------eCCCCCCCC-----CHHHHHHHHHhc
Confidence 45567999742 22 121 345554 22 368887642 233333543 367788888889
Q ss_pred CCcEEEe--ecCcccHHHHhh-hcceecccCCccCC---HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCc
Q 022892 87 DIPIVTD--VHETVQCEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPN 160 (290)
Q Consensus 87 Gi~~~s~--~~d~~~~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~ 160 (290)
.+|++.- +.|+.++..... .+|++-+=..-++. ..|++.+-.+|+-+++... +.+|++.|++ .|. +
T Consensus 104 ~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh---~~~El~rAl~----~~a-~ 175 (258)
T 4a29_A 104 SIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILIN---DENDLDIALR----IGA-R 175 (258)
T ss_dssp SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEES---SHHHHHHHHH----TTC-S
T ss_pred CCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcc---hHHHHHHHhc----CCC-c
Confidence 9999984 456666665554 57766443333332 2566777789999999875 8999999875 343 4
Q ss_pred EEEEeecCC-CCCCCCCCCchhHHHHHh-c--CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCE
Q 022892 161 VMVCERGTM-FGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 236 (290)
Q Consensus 161 i~L~~~gs~-~~y~~~~~dL~~i~~lk~-~--~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G 236 (290)
++ |.+ .+..+..+|+.....|.. . ++.++.-| ++ .. +.-.......|++|
T Consensus 176 iI----GINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsES--GI---------------~t-----~~dv~~l~~~G~~a 229 (258)
T 4a29_A 176 FI----GIMSRDFETGEINKENQRKLISMIPSNVVKVAKL--GI---------------SE-----RNEIEELRKLGVNA 229 (258)
T ss_dssp EE----EECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEE--SS---------------CC-----HHHHHHHHHTTCCE
T ss_pred EE----EEeCCCccccccCHHHHHHHHhhCCCCCEEEEcC--CC---------------CC-----HHHHHHHHHCCCCE
Confidence 43 322 234456788888777765 2 33333211 11 01 23334456789999
Q ss_pred EEEeeeC
Q 022892 237 VFMEVHD 243 (290)
Q Consensus 237 ~~IEkH~ 243 (290)
++|=..+
T Consensus 230 ~LVGeal 236 (258)
T 4a29_A 230 FLISSSL 236 (258)
T ss_dssp EEECHHH
T ss_pred EEECHHH
Confidence 9998776
No 316
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=78.85 E-value=4.6 Score=36.38 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=51.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.+++. +++|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 68 ~gr~pvi~Gvg~~-~t~~ai~la~~a----~~~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~ia~a~~lPiil 132 (291)
T 3a5f_A 68 NKRIPVIAGTGSN-NTAASIAMSKWA----ESIGVDGLLVI--------TPY-YNKTT-QKGLVKHFKAVSDAVSTPIII 132 (291)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHHHH----HHTTCSEEEEE--------CCC-SSCCC-HHHHHHHC-CTGGGCCSCEEE
T ss_pred CCCCcEEEeCCcc-cHHHHHHHHHHH----HhcCCCEEEEc--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 3567799999974 556666666554 45799987653 122 22222 344 44566777888888874
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|.+ .+-.+|-.+.++.+.
T Consensus 133 Yn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd~~~~ 170 (291)
T 3a5f_A 133 YNVPGRTGLNITPGTLKELCEDKNIVAVXEASGNISQI 170 (291)
T ss_dssp EECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCCHHHH
T ss_pred EeCccccCCCCCHHHHHHHHcCCCEEEEeCCCCCHHHH
Confidence 1 123333333433 233456555555443
No 317
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=78.60 E-value=38 Score=30.66 Aligned_cols=153 Identities=13% Similarity=0.082 Sum_probs=84.1
Q ss_pred HHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc------------C---CHHHHHHHHh-cCCe-EEEeC
Q 022892 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC------------R---QTDLLVAAAK-TGKI-INIKK 137 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~------------~---n~~lL~~~a~-~~~P-Vilst 137 (290)
...|++..++-...++-++||..++..+++ .+|++.+|+... + -....+.+++ .+.| |+.-+
T Consensus 23 ~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~ 102 (281)
T 1oy0_A 23 THHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADL 102 (281)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 455666666666788889999999999998 699999985421 1 2233455554 4444 66666
Q ss_pred CCCC---CHHHH-HHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 138 GQFC---ASSVM-VNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 138 G~~~---tl~e~-~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
+... ++++. .+|+..+++.|- +-+=+|-|. + -...|..+.+.++||+.----+.|+... -|+-
T Consensus 103 pfgsy~~s~~~a~~na~rl~~eaGa-~aVklEdg~------e--~~~~I~al~~agIpV~gHiGLtPqsv~~----~ggf 169 (281)
T 1oy0_A 103 PFGSYEAGPTAALAAATRFLKDGGA-HAVKLEGGE------R--VAEQIACLTAAGIPVMAHIGFTPQSVNT----LGGF 169 (281)
T ss_dssp CTTSSTTCHHHHHHHHHHHHHTTCC-SEEEEEBSG------G--GHHHHHHHHHHTCCEEEEEECCC-------------
T ss_pred CCCcccCCHHHHHHHHHHHHHHhCC-eEEEECCcH------H--HHHHHHHHHHCCCCEEeeecCCcceecc----cCCe
Confidence 6532 56664 456776766775 444556542 1 1235555555789986300001111000 0000
Q ss_pred cCCCCc---ccHHHHHHHHHHcCCCEEEEee
Q 022892 214 ASGGLR---ELIPCIARTAIAVGVDGVFMEV 241 (290)
Q Consensus 214 ~~~g~~---~~~~~~a~aAva~GA~G~~IEk 241 (290)
.--|+. +.+..=+++-..+||+++++|.
T Consensus 170 ~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 170 RVQGRGDAAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 011211 1222234444578999999997
No 318
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=78.46 E-value=3.2 Score=37.77 Aligned_cols=53 Identities=13% Similarity=0.026 Sum_probs=47.2
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
.+|++-|++-.-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 81 ~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~ 133 (330)
T 4ew6_A 81 SIDAVSLCMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGA 133 (330)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 49999999998888899999999999999999999999999998887776653
No 319
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=78.35 E-value=18 Score=32.61 Aligned_cols=105 Identities=12% Similarity=0.092 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCC-C---CCCC---CCCC--chhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTM-F---GYND---LIVD--PRNLEWMREANCPVVADVTHSLQQPAGKKLDGGG 212 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~-~---~y~~---~~~d--L~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~ 212 (290)
..++++.|++.+...|.+.|.+.-..|. + +... +.++ ...+...|+.++.|.|++.-+-
T Consensus 78 ~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~------------ 145 (293)
T 3ewb_X 78 VEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDAT------------ 145 (293)
T ss_dssp SHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGG------------
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCC------------
Confidence 5778999998887777777887766652 1 1111 0011 1222333445777877443220
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022892 213 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 271 (290)
Q Consensus 213 ~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~ 271 (290)
.-..+++..++.++..+|++-+ - ++|-.-.+.|.++.++++.+++.
T Consensus 146 ---~~~~~~~~~~~~~~~~~G~~~i----~------l~DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 146 ---RSDRAFLIEAVQTAIDAGATVI----N------IPDTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp ---GSCHHHHHHHHHHHHHTTCCEE----E------EECSSSCCCHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHcCCCEE----E------ecCCCCCCCHHHHHHHHHHHHHh
Confidence 0124566778888899999832 2 27888899999999999988764
No 320
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=78.31 E-value=7.6 Score=38.20 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=30.9
Q ss_pred cCCH-HHHHHHHhcCCeEEEeCCCC---------CCHHHHHHHHHHHHHcC-CCcEEEEee
Q 022892 117 CRQT-DLLVAAAKTGKIINIKKGQF---------CASSVMVNSAEKVRLAG-NPNVMVCER 166 (290)
Q Consensus 117 ~~n~-~lL~~~a~~~~PVilstG~~---------~tl~e~~~Ave~i~~~G-n~~i~L~~~ 166 (290)
+++. ++.+.+.+.+.||++|--.. -+.+|+..+++.+.+.. +.. ++++.
T Consensus 214 v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~~~~~-vlVEe 273 (540)
T 3glk_A 214 VKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSP-IFLMK 273 (540)
T ss_dssp CCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHSTTCC-EEEEE
T ss_pred cCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhccCCC-EEEEE
Confidence 4444 34455667899999995332 16788888888776542 334 44444
No 321
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=78.22 E-value=18 Score=33.99 Aligned_cols=126 Identities=13% Similarity=0.161 Sum_probs=71.5
Q ss_pred hcCCcEEEeecCcccHHHHhh-h--cceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcE
Q 022892 85 AYDIPIVTDVHETVQCEEVGK-V--ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNV 161 (290)
Q Consensus 85 ~~Gi~~~s~~~d~~~~~~l~~-~--~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i 161 (290)
++.+|+++.|+++..=..++. . .-.+-+=+..++--++.+++.+...++....|. .++..+.++.+...|- ++
T Consensus 40 ~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~~~~~~~~~~g~---~~~~~e~~~~a~~aGv-dv 115 (361)
T 3r2g_A 40 TLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKGPVFVSVGC---TENELQRAEALRDAGA-DF 115 (361)
T ss_dssp EESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHTCCSCCBEEECS---SHHHHHHHHHHHHTTC-CE
T ss_pred EcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhhcceEEEEEcCC---CHHHHHHHHHHHHcCC-CE
Confidence 577888888887654333322 1 222222233444445555555555555555442 2444555666677775 46
Q ss_pred EEEeecCCCCCCCCCCCchhHHHHHh-c-CCCEEE-eCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEE
Q 022892 162 MVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVA-DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 238 (290)
Q Consensus 162 ~L~~~gs~~~y~~~~~dL~~i~~lk~-~-~~pV~~-D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~ 238 (290)
+.++... +++.. -...+..+|+ + ++||+. +.. + +..++.++.+|||++.
T Consensus 116 I~id~a~--G~~~~--~~e~I~~ir~~~~~~~Vi~G~V~-T-----------------------~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 116 FCVDVAH--AHAKY--VGKTLKSLRQLLGSRCIMAGNVA-T-----------------------YAGADYLASCGADIIK 167 (361)
T ss_dssp EEEECSC--CSSHH--HHHHHHHHHHHHTTCEEEEEEEC-S-----------------------HHHHHHHHHTTCSEEE
T ss_pred EEEeCCC--CCcHh--HHHHHHHHHHhcCCCeEEEcCcC-C-----------------------HHHHHHHHHcCCCEEE
Confidence 6665432 23221 1346777887 5 788876 221 1 5668889999999888
Q ss_pred Eeee
Q 022892 239 MEVH 242 (290)
Q Consensus 239 IEkH 242 (290)
+=.|
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 7444
No 322
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=78.19 E-value=13 Score=34.30 Aligned_cols=91 Identities=23% Similarity=0.231 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccc--cccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHH
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSS--FDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEV 103 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~--~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l 103 (290)
+.+...++|++|.+ +|++++-... +. +.... ..+.+ ..+..++++++..++|++.. +++++.++.+
T Consensus 237 ~~~~~~~la~~L~~----~Gvd~i~vs~g~~~--~~~~~--~~~~~--~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~ 306 (349)
T 3hgj_A 237 SLEDTLAFARRLKE----LGVDLLDCSSGGVV--LRVRI--PLAPG--FQVPFADAVRKRVGLRTGAVGLITTPEQAETL 306 (349)
T ss_dssp CHHHHHHHHHHHHH----TTCCEEEEECCCSC--SSSCC--CCCTT--TTHHHHHHHHHHHCCEEEECSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEecCCcC--ccccc--CCCcc--ccHHHHHHHHHHcCceEEEECCCCCHHHHHHH
Confidence 45666777777766 6999875532 22 11000 01111 23556677777789999985 5788888776
Q ss_pred hh-h-cceecccCCccCCHHHHHHHHh
Q 022892 104 GK-V-ADIIQIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 104 ~~-~-~d~~kIgs~~~~n~~lL~~~a~ 128 (290)
.+ . +|++.+|...+.|.++.+.+.+
T Consensus 307 l~~G~aD~V~iGR~~lanPdl~~k~~~ 333 (349)
T 3hgj_A 307 LQAGSADLVLLGRVLLRDPYFPLRAAK 333 (349)
T ss_dssp HHTTSCSEEEESTHHHHCTTHHHHHHH
T ss_pred HHCCCceEEEecHHHHhCchHHHHHHH
Confidence 44 4 9999999999999988877654
No 323
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=78.16 E-value=12 Score=34.19 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCcEEEe-----------------ecCcccHHHH-hh-hcceecccCCcc---------CCHHHHHHHHh
Q 022892 77 KILEKVKIAYDIPIVTD-----------------VHETVQCEEV-GK-VADIIQIPAFLC---------RQTDLLVAAAK 128 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~-----------------~~d~~~~~~l-~~-~~d~~kIgs~~~---------~n~~lL~~~a~ 128 (290)
+++.++|++.|+.+=.| --||+++..+ .+ .+|++.|+=++. -++++|+++.+
T Consensus 124 k~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~ 203 (288)
T 3q94_A 124 KKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRD 203 (288)
T ss_dssp HHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHH
Confidence 35778889999887665 2455566444 44 699988876665 47888888764
Q ss_pred -cCCeEEEeCCCCCCHHHHHHHHH
Q 022892 129 -TGKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 129 -~~~PVilstG~~~tl~e~~~Ave 151 (290)
.+.|++|-=|....-+++..|++
T Consensus 204 ~v~vpLVlHGgSG~~~e~i~~ai~ 227 (288)
T 3q94_A 204 FTGVPLVLHGGTGIPTADIEKAIS 227 (288)
T ss_dssp HHCSCEEECCCTTCCHHHHHHHHH
T ss_pred hcCCCEEEeCCCCCCHHHHHHHHH
Confidence 68999998887767777877764
No 324
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=77.62 E-value=6.8 Score=36.56 Aligned_cols=76 Identities=12% Similarity=0.022 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceecccC---Ccc----CCHHHHHHHHh-c--CCeEEEeCCCCCC
Q 022892 75 GLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIPA---FLC----RQTDLLVAAAK-T--GKIINIKKGQFCA 142 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs---~~~----~n~~lL~~~a~-~--~~PVilstG~~~t 142 (290)
.++.++++++..++|++. .+.+++.+..+.+ .+|++.|+. +.. .+...|.++.+ . +.||+.+-|.. +
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~-~ 291 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR-R 291 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC-S
T ss_pred hHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC-C
Confidence 356788888999999998 7888888888877 699999965 221 34455666554 4 68999999999 9
Q ss_pred HHHHHHHHH
Q 022892 143 SSVMVNSAE 151 (290)
Q Consensus 143 l~e~~~Ave 151 (290)
.+++..++.
T Consensus 292 ~~D~~k~l~ 300 (370)
T 1gox_A 292 GTDVFKALA 300 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888764
No 325
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=77.45 E-value=3.2 Score=38.16 Aligned_cols=58 Identities=9% Similarity=0.061 Sum_probs=47.1
Q ss_pred cHHHH-hh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 022892 99 QCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 156 (290)
Q Consensus 99 ~~~~l-~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~ 156 (290)
+.+.+ .+ .+|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 59 ~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 118 (359)
T 3m2t_A 59 NVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRS 118 (359)
T ss_dssp SHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHc
Confidence 34444 33 589999999988888999999999999999999999999988877654443
No 326
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=77.44 E-value=24 Score=30.04 Aligned_cols=123 Identities=10% Similarity=0.023 Sum_probs=70.9
Q ss_pred HHHHHHHcCCCEEeccccccCCCCCcc---cCC-CCChhHHHHHHHHHHHhcCCcEEEe-ecCccc-------HHHHhh-
Q 022892 39 IKSISTKVGLPLVFKSSFDKANRTSSK---SFR-GPGMVEGLKILEKVKIAYDIPIVTD-VHETVQ-------CEEVGK- 105 (290)
Q Consensus 39 L~~~a~~~G~~~V~~~~~~k~~rts~~---~~~-g~~~~~~l~~L~~~~~~~Gi~~~s~-~~d~~~-------~~~l~~- 105 (290)
.++.++++|++.|-..... +....+ .|. ... .+.++.+++.+++.||.+.+- ++.... ++....
T Consensus 27 ~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 27 ALDKTQELGLKYIEIYPGH--KLGGKWGDKVFDFNLD-AQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHTTCCEEEECTTE--ECCGGGTTCEESTTCC-HHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEeecCCc--ccccccccccccccCC-HHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHc
Confidence 3444556899988665433 111000 011 111 467889999999999998763 222112 223333
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC----CHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----ASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
.++.+.+.+..-.-..+.+.+.+.|..+.+.+-... +.+++... +.. +.+++-+|.-..
T Consensus 104 Ga~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~l---l~~-~~~~~g~~~D~~ 166 (262)
T 3p6l_A 104 DLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKA---ISG-RSQSLGSCSDVG 166 (262)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHH---HTT-SCTTEEEEEEHH
T ss_pred CCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHH---HHh-CCCceEEEechH
Confidence 366777765432223455556677999999987652 44555443 433 567888887765
No 327
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=77.37 E-value=14 Score=32.62 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceec
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQ 111 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~k 111 (290)
.+.++..++ +|++.|....++ ..+.++|++.|++++--+++++++....+ .+|++|
T Consensus 96 ~~~a~~Ai~----AGA~fIvsP~~~-------------------~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK 152 (232)
T 4e38_A 96 GEQALAAKE----AGATFVVSPGFN-------------------PNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLK 152 (232)
T ss_dssp HHHHHHHHH----HTCSEEECSSCC-------------------HHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHH----cCCCEEEeCCCC-------------------HHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEE
Confidence 455666666 599988643221 24556788899999999999999988777 699999
Q ss_pred ccCCccC-CHHHHHHHHh-c-CCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 112 IPAFLCR-QTDLLVAAAK-T-GKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 112 Igs~~~~-n~~lL~~~a~-~-~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
+=-.... -..+|+++.+ . +.|++ -+|-- +++ ++.+++ +.|+
T Consensus 153 ~FPa~~~gG~~~lkal~~p~p~ip~~-ptGGI-~~~---n~~~~l-~aGa 196 (232)
T 4e38_A 153 FFPAEASGGISMVKSLVGPYGDIRLM-PTGGI-TPS---NIDNYL-AIPQ 196 (232)
T ss_dssp ECSTTTTTHHHHHHHHHTTCTTCEEE-EBSSC-CTT---THHHHH-TSTT
T ss_pred ECcCccccCHHHHHHHHHHhcCCCee-eEcCC-CHH---HHHHHH-HCCC
Confidence 8443333 4688888866 3 46766 45544 454 444555 3565
No 328
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=76.94 E-value=4.1 Score=37.02 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=46.9
Q ss_pred Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 103 VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 103 l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
+.+ .+|++-|..-.-.+.++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 61 l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g 116 (345)
T 3f4l_A 61 LNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKG 116 (345)
T ss_dssp HTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 444 5999999999989999999999999999999999999999888877655543
No 329
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=76.77 E-value=8.7 Score=35.68 Aligned_cols=92 Identities=13% Similarity=0.040 Sum_probs=55.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHH-hcCCcEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKI-AYDIPIV 91 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~-~~Gi~~~ 91 (290)
++++-||||.++. |...+++.|++..+ +|+|++.-. .|+.|+++. +++ +...+++++ ..++|++
T Consensus 90 ~grvpViaGvg~~-st~eai~la~~A~~----~Gadavlv~--------~P~y~~~~s-~~~l~~~f~~IA~aa~~lPii 155 (344)
T 2hmc_A 90 KAGIPVIVGTGAV-NTASAVAHAVHAQK----VGAKGLMVI--------PRVLSRGSV-IAAQKAHFKAILSAAPEIPAV 155 (344)
T ss_dssp HTTCCEEEECCCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCCSSSTTC-HHHHHHHHHHHHHHSTTSCEE
T ss_pred CCCCcEEEecCCC-CHHHHHHHHHHHHh----cCCCEEEEC--------CCccCCCCC-HHHHHHHHHHHHhhCCCCcEE
Confidence 3567799999974 56666666666555 699988653 223222133 445 456777888 7889987
Q ss_pred Ee-------ecCcccHHHH-hh--hcceecccCC--ccCC
Q 022892 92 TD-------VHETVQCEEV-GK--VADIIQIPAF--LCRQ 119 (290)
Q Consensus 92 s~-------~~d~~~~~~l-~~--~~d~~kIgs~--~~~n 119 (290)
-= .++++.+..| .+ .+-.+|-.++ ++.+
T Consensus 156 lYn~P~tg~~l~~e~~~~L~a~~pnIvGiKdssgp~d~~~ 195 (344)
T 2hmc_A 156 IYNSPYYGFATRADLFFALRAEHKNLVGFKEFGGPADMRY 195 (344)
T ss_dssp EEEBGGGTBCCCHHHHHHHHHHCTTEEEEEECSCHHHHHH
T ss_pred EEecCccCCCcCHHHHHHHHhcCCCEEEEEcCCCCCCHHH
Confidence 51 1344444444 43 2445676666 5543
No 330
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=76.67 E-value=20 Score=34.32 Aligned_cols=121 Identities=16% Similarity=0.119 Sum_probs=70.4
Q ss_pred HHHHHHHhcCC-eEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC--CCC-CC----CC--chhHHHHHhcCC
Q 022892 121 DLLVAAAKTGK-IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG--YND-LI----VD--PRNLEWMREANC 190 (290)
Q Consensus 121 ~lL~~~a~~~~-PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~--y~~-~~----~d--L~~i~~lk~~~~ 190 (290)
+..+.+++.++ +-++. ..-.+.+++..|++ .|-+.|++.-..|... +.. .+ ++ ...+...|+.++
T Consensus 91 ~~~~~i~~~~~~~~v~~-~~r~~~~di~~A~~----aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~ 165 (423)
T 3ivs_A 91 QDCEAICKLGLKCKILT-HIRCHMDDARVAVE----TGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGI 165 (423)
T ss_dssp HHHHHHHTSCCSSEEEE-EEESCHHHHHHHHH----TTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHhcCCCCEEEE-eeccChhhHHHHHH----cCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCC
Confidence 34555655443 22222 12237888877765 5777888877665310 110 11 11 123444455678
Q ss_pred CEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022892 191 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 191 pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
.|.+++.-+. ....+++..++.++..+||+-+ .++|-.-.+.|.++.++++.+++
T Consensus 166 ~V~~~~eda~---------------r~d~~~~~~v~~~~~~~Ga~~i----------~l~DTvG~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 166 EVRFSSEDSF---------------RSDLVDLLSLYKAVDKIGVNRV----------GIADTVGCATPRQVYDLIRTLRG 220 (423)
T ss_dssp EEEEEEESGG---------------GSCHHHHHHHHHHHHHHCCSEE----------EEEETTSCCCHHHHHHHHHHHHH
T ss_pred EEEEEEccCc---------------CCCHHHHHHHHHHHHHhCCCcc----------ccCCccCcCCHHHHHHHHHHHHh
Confidence 8877544321 1234566677888889999832 23788889999999999998876
Q ss_pred H
Q 022892 271 I 271 (290)
Q Consensus 271 ~ 271 (290)
.
T Consensus 221 ~ 221 (423)
T 3ivs_A 221 V 221 (423)
T ss_dssp H
T ss_pred h
Confidence 3
No 331
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=76.65 E-value=17 Score=31.40 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=42.0
Q ss_pred HHHHHhcCCeEEEeC----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-c--CCCEEE
Q 022892 123 LVAAAKTGKIINIKK----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 194 (290)
Q Consensus 123 L~~~a~~~~PVilst----G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~--~~pV~~ 194 (290)
++++.+.-.|+++|- +.. +.+++..+++.+...|-+-| .+++ ++...-.++..+..+++ . .+||+.
T Consensus 108 i~~v~~a~~pv~vKvi~e~~~l-~~~~~~~~a~~a~eaGad~I----~tst-g~~~gga~~~~i~~v~~~v~~~ipVia 180 (225)
T 1mzh_A 108 LKEIFRETPSAVHKVIVETPYL-NEEEIKKAVEICIEAGADFI----KTST-GFAPRGTTLEEVRLIKSSAKGRIKVKA 180 (225)
T ss_dssp HHHHHHTCTTSEEEEECCGGGC-CHHHHHHHHHHHHHHTCSEE----ECCC-SCSSSCCCHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHhcCceEEEEEeCCCC-CHHHHHHHHHHHHHhCCCEE----EECC-CCCCCCCCHHHHHHHHHHhCCCCcEEE
Confidence 455544322777765 444 88999999999998887544 2221 22111246678888887 4 589877
No 332
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=76.44 E-value=34 Score=30.16 Aligned_cols=82 Identities=10% Similarity=-0.050 Sum_probs=55.2
Q ss_pred HHHHHHHHHhc---CCcEE-EeecCcccHHHHhh-hcceecc-----cCC-ccCCHHHHHHHH-hcCCeEEEeCCCCCCH
Q 022892 76 LKILEKVKIAY---DIPIV-TDVHETVQCEEVGK-VADIIQI-----PAF-LCRQTDLLVAAA-KTGKIINIKKGQFCAS 143 (290)
Q Consensus 76 l~~L~~~~~~~---Gi~~~-s~~~d~~~~~~l~~-~~d~~kI-----gs~-~~~n~~lL~~~a-~~~~PVilstG~~~tl 143 (290)
...+.+.++++ |+.++ -+..+++.+..+.+ ..+++-. |++ ...+.++|+.+. ..+.||+.--|.. +.
T Consensus 112 ~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~-t~ 190 (264)
T 1xm3_A 112 PVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIG-SP 190 (264)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-SH
T ss_pred hHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCC-CH
Confidence 45666677777 98888 56666777776666 5777622 332 234677777764 4588999999998 99
Q ss_pred HHHHHHHHHHHHcCCCcEE
Q 022892 144 SVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 144 ~e~~~Ave~i~~~Gn~~i~ 162 (290)
+++..+++ .|.+-++
T Consensus 191 eda~~~~~----~GAdgVi 205 (264)
T 1xm3_A 191 KDAAYAME----LGADGVL 205 (264)
T ss_dssp HHHHHHHH----TTCSEEE
T ss_pred HHHHHHHH----cCCCEEE
Confidence 99877643 5654333
No 333
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=76.34 E-value=13 Score=33.45 Aligned_cols=75 Identities=8% Similarity=-0.016 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhcCCcEE--EeecC-cccHHHHhhh-cceecc-------cCCccCC---HHHHHHHHh-cCCeEEEeCCC
Q 022892 75 GLKILEKVKIAYDIPIV--TDVHE-TVQCEEVGKV-ADIIQI-------PAFLCRQ---TDLLVAAAK-TGKIINIKKGQ 139 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~--s~~~d-~~~~~~l~~~-~d~~kI-------gs~~~~n---~~lL~~~a~-~~~PVilstG~ 139 (290)
....+.++++++|+..+ ..|-. .+-+..+.+. -+++.. |++.-.. .++++.+.+ ++.||++--|.
T Consensus 138 e~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI 217 (271)
T 3nav_A 138 ESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGI 217 (271)
T ss_dssp GCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred HHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCC
Confidence 35667778888887533 33333 2344444442 334333 2222112 234455433 46677777777
Q ss_pred CCCHHHHHHHH
Q 022892 140 FCASSVMVNSA 150 (290)
Q Consensus 140 ~~tl~e~~~Av 150 (290)
+ +.+++..++
T Consensus 218 s-t~e~~~~~~ 227 (271)
T 3nav_A 218 S-EPAQVKQAI 227 (271)
T ss_dssp C-SHHHHHHHH
T ss_pred C-CHHHHHHHH
Confidence 7 777776554
No 334
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=76.24 E-value=3.6 Score=37.64 Aligned_cols=49 Identities=27% Similarity=0.238 Sum_probs=33.3
Q ss_pred CCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 176 IVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 176 ~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
..|+..+..+++ .++||+..+.=.+ .. +.-+..+..+|++|+|+=+-.+
T Consensus 184 ~ad~elI~~Ike~~~IPVV~IAnGGI---------------~T-----pedA~~~le~GaDGVmVGrAI~ 233 (291)
T 3o07_A 184 RVPVSLLKDVLEKGKLPVVNFAAGGV---------------AT-----PADAALLMQLGCDGVFVGSGIF 233 (291)
T ss_dssp TSCHHHHHHHHHHTSCSSCEEBCSSC---------------CS-----HHHHHHHHHTTCSCEEECGGGG
T ss_pred CCCHHHHHHHHHccCCCEEEecCCCC---------------CC-----HHHHHHHHHhCCCEEEEchHHh
Confidence 467888888888 7899864222111 01 4455566789999999987653
No 335
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=76.10 E-value=8.8 Score=36.85 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh--cceecccCCcc--CCHHHHHHHHhcC--CeEEEeCCCCCCHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV--ADIIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSVMV 147 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~--~d~~kIgs~~~--~n~~lL~~~a~~~--~PVilstG~~~tl~e~~ 147 (290)
+....+.+.+++++|.++=+|+++++.+-+..+ -.-++|.+.+. +|..-++..-..+ --|.+|-+..+++.|++
T Consensus 274 e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~ 353 (439)
T 2akz_A 274 QLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAI 353 (439)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHH
Confidence 346778888899999999999999988776552 12245555553 5665555443332 25677777777777777
Q ss_pred HHHHHHHHcCCCcEEEEee
Q 022892 148 NSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 148 ~Ave~i~~~Gn~~i~L~~~ 166 (290)
++++..+..|- .+++-||
T Consensus 354 ~ia~lA~~~g~-~~~~sh~ 371 (439)
T 2akz_A 354 QACKLAQENGW-GVMVSHR 371 (439)
T ss_dssp HHHHHHHHTTC-EEEEECC
T ss_pred HHHHHHHHCCC-eEEeecC
Confidence 77777666542 3444455
No 336
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=76.06 E-value=6.7 Score=36.14 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=54.4
Q ss_pred cceecccCCccCCHHHHH----HHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhH
Q 022892 107 ADIIQIPAFLCRQTDLLV----AAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNL 182 (290)
Q Consensus 107 ~d~~kIgs~~~~n~~lL~----~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i 182 (290)
-.=|.||++++.|.+.++ ++...+.||||..... ++.+. |. . + +..+
T Consensus 24 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g--------~~~y~---g~-~-----------~------~~~~ 74 (306)
T 3pm6_A 24 THSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPW--------AIQYA---DS-L-----------L------VRTA 74 (306)
T ss_dssp HTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHH--------HHHHH---TT-H-----------H------HHHH
T ss_pred HCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChh--------HHhhc---cH-H-----------H------HHHH
Confidence 345788999999987654 4557899999987543 22222 11 0 0 1223
Q ss_pred HHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc--------CCCEEEEe
Q 022892 183 EWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV--------GVDGVFME 240 (290)
Q Consensus 183 ~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~--------GA~G~~IE 240 (290)
..+.+ .++||.+--||+. . ......|+.+ |...+||.
T Consensus 75 ~~~A~~~~VPVaLHlDHg~----------------~-----~e~i~~ai~~~~~~~~~~GFtSVMiD 120 (306)
T 3pm6_A 75 ASACRAASVPITLHLDHAQ----------------D-----PEIIKRAADLSRSETHEPGFDSIMVD 120 (306)
T ss_dssp HHHHHHCSSCEEEEEEEEC----------------C-----HHHHHHHHHTC------CCCSEEEEC
T ss_pred HHHHHHCCCCEEEEcCCCC----------------C-----HHHHHHHHHhhhhccCCCCCCEEEEe
Confidence 33434 7899999778873 2 5667788888 88877774
No 337
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=76.03 E-value=18 Score=32.48 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=52.0
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++++-||+|.++. |...+++.|+ .|+++|+|++.-. .|+ |.++. +++ +...+++++..++|++-
T Consensus 68 ~gr~pviaGvg~~-~t~~ai~la~----~a~~~Gadavlv~--------~P~-y~~~s-~~~l~~~f~~ia~a~~lPiil 132 (292)
T 2ojp_A 68 DGRIPVIAGTGAN-ATAEAISLTQ----RFNDSGIVGCLTV--------TPY-YNRPS-QEGLYQHFKAIAEHTDLPQIL 132 (292)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHH----HTTTSSCSEEEEE--------CCC-SSCCC-HHHHHHHHHHHHTTCSSCEEE
T ss_pred CCCCcEEEecCCc-cHHHHHHHHH----HHHhcCCCEEEEC--------CCC-CCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 3567799999973 5555555554 4556799987653 122 22222 344 45677788888899874
Q ss_pred e--------ecCcccHHHHhh--hcceecccCCccCCH
Q 022892 93 D--------VHETVQCEEVGK--VADIIQIPAFLCRQT 120 (290)
Q Consensus 93 ~--------~~d~~~~~~l~~--~~d~~kIgs~~~~n~ 120 (290)
= .++++.+..|.+ .+-.+|-.+.++.++
T Consensus 133 Yn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd~~~~ 170 (292)
T 2ojp_A 133 YNVPSRTGCDLLPETVGRLAKVKNIIGIXEATGNLTRV 170 (292)
T ss_dssp ECCHHHHSCCCCHHHHHHHHTSTTEEEC-CCSCCTHHH
T ss_pred EeCcchhccCCCHHHHHHHHcCCCEEEEeCCCCCHHHH
Confidence 1 133333434433 244556666665443
No 338
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=75.77 E-value=9.3 Score=36.66 Aligned_cols=84 Identities=18% Similarity=0.112 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh--cceecccCCcc--CCHHHHHHHHhcC--CeEEEeCCCCCCHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV--ADIIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSVMV 147 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~--~d~~kIgs~~~--~n~~lL~~~a~~~--~PVilstG~~~tl~e~~ 147 (290)
+.+..+.+.+++++|.++=+|+++++.+-+..+ -.-++|.+.+. +|..-++..-..+ --|.+|-+..+++.|++
T Consensus 277 eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~ 356 (436)
T 2al1_A 277 QLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESI 356 (436)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHH
Confidence 445677888899999999999999888766542 12234444443 4544444332222 24555555555666666
Q ss_pred HHHHHHHHcC
Q 022892 148 NSAEKVRLAG 157 (290)
Q Consensus 148 ~Ave~i~~~G 157 (290)
.+++.....|
T Consensus 357 ~ia~lA~~~g 366 (436)
T 2al1_A 357 KAAQDSFAAG 366 (436)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 6666555443
No 339
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=75.74 E-value=11 Score=34.35 Aligned_cols=95 Identities=17% Similarity=0.292 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCC----Ccc--cCCCC-C--h-hHHHHHHHHHHHhc--CCcEEE--e
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRT----SSK--SFRGP-G--M-VEGLKILEKVKIAY--DIPIVT--D 93 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rt----s~~--~~~g~-~--~-~~~l~~L~~~~~~~--Gi~~~s--~ 93 (290)
+.+...+.|+.+.+ +|+|+|.-..... .|. .+. .+.++ | + ...+..++++++.. ++|++. -
T Consensus 223 ~~~~~~~~a~~l~~----~Gvd~i~vsn~~~-~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GG 297 (336)
T 1f76_A 223 SEEELIQVADSLVR----HNIDGVIATNTTL-DRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGG 297 (336)
T ss_dssp CHHHHHHHHHHHHH----TTCSEEEECCCBC-CCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESS
T ss_pred CHHHHHHHHHHHHH----cCCcEEEEeCCcc-cccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 55566777777665 6999887543211 111 111 11111 1 1 13456777887777 899988 5
Q ss_pred ecCcccHHHHhh-hcceecccCCccC-CHHHHHHHH
Q 022892 94 VHETVQCEEVGK-VADIIQIPAFLCR-QTDLLVAAA 127 (290)
Q Consensus 94 ~~d~~~~~~l~~-~~d~~kIgs~~~~-n~~lL~~~a 127 (290)
+.+++++..+.. .+|.++||...+. +..+.+.+.
T Consensus 298 I~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~ 333 (336)
T 1f76_A 298 IDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIV 333 (336)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHH
Confidence 888888887665 7999999999987 888877664
No 340
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=75.72 E-value=2.5 Score=37.81 Aligned_cols=65 Identities=11% Similarity=0.076 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
.+..++..++.++.|+++|+..|....+. ++.+...|+. +.+.|.++.+++++.||.+.-+++..
T Consensus 109 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~--~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 109 MPKFDEFWKKATDIHAELGVSCMVQPSLP--RIENEDDAKV--VSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCC--CCSSHHHHHH--HHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeCCCC--CCCCHHHHHH--HHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 56778999999999999999988754322 2211111211 13678889999999999999998764
No 341
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=75.35 E-value=16 Score=32.62 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=36.3
Q ss_pred CeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCC-ChhHH-HHHHHHHHHhcCCcEEE
Q 022892 16 PFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGP-GMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 16 ~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~-~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
++-||||.++. |...+++.|++..+ +|+|++.-. .|+.|+ + . +++ +...+++++ ++|++-
T Consensus 62 rvpviaGvg~~-~t~~ai~la~~A~~----~Gadavlv~--------~P~y~~-~~~-~~~l~~~f~~va~--~lPiil 123 (283)
T 2pcq_A 62 RKPFLVGLMEE-TLPQAEGALLEAKA----AGAMALLAT--------PPRYYH-GSL-GAGLLRYYEALAE--KMPLFL 123 (283)
T ss_dssp SSCCEEEECCS-SHHHHHHHHHHHHH----HTCSEEEEC--------CCCTTG-GGT-TTHHHHHHHHHHH--HSCEEE
T ss_pred CCcEEEeCCCC-CHHHHHHHHHHHHh----cCCCEEEec--------CCcCCC-CCC-HHHHHHHHHHHhc--CCCEEE
Confidence 67789999974 66666766666555 699987653 122111 2 2 344 444555655 788773
No 342
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=75.32 E-value=8 Score=34.70 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=39.1
Q ss_pred EEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEE
Q 022892 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVT 92 (290)
Q Consensus 19 iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s 92 (290)
||+|.++. |...+++.+++. +++|+|++.-. .|+.|+.+. +++ +...+++++..++|++-
T Consensus 67 vi~Gvg~~-~t~~ai~la~~A----~~~Gadavlv~--------~P~y~~~~s-~~~l~~~f~~va~a~~lPiil 127 (286)
T 2r91_A 67 VIVQVASL-NADEAIALAKYA----ESRGAEAVASL--------PPYYFPRLS-ERQIAKYFRDLCSAVSIPVFL 127 (286)
T ss_dssp EEEECCCS-SHHHHHHHHHHH----HHTTCSEEEEC--------CSCSSTTCC-HHHHHHHHHHHHHHCSSCEEE
T ss_pred EEEeeCCC-CHHHHHHHHHHH----HhcCCCEEEEc--------CCcCCCCCC-HHHHHHHHHHHHHhcCCCEEE
Confidence 99999974 566666666554 45799998753 223222133 344 55677888889999884
No 343
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=75.30 E-value=12 Score=33.85 Aligned_cols=57 Identities=16% Similarity=0.036 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCCC--chhHHHHHh-cCCCEEEeCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVD--PRNLEWMRE-ANCPVVADVTH 198 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~----~~~d--L~~i~~lk~-~~~pV~~D~sH 198 (290)
+.+++..-++...+.|-+-|=+.=.++.++... +++. ...+..+++ +++||.+|+.+
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~ 99 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSK 99 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCC
Confidence 567777777777777865444433233333221 1122 123344444 58888888765
No 344
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=75.27 E-value=10 Score=36.96 Aligned_cols=115 Identities=17% Similarity=0.022 Sum_probs=64.1
Q ss_pred HHHHhh-hcceecccCCccCC---HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----eecC
Q 022892 100 CEEVGK-VADIIQIPAFLCRQ---TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ERGT 168 (290)
Q Consensus 100 ~~~l~~-~~d~~kIgs~~~~n---~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-----~~gs 168 (290)
++.+.+ .+|++.|.+..-.. .++++++.+. +.||+.++-. |.++.+.+++ .|-+-|.+- +|++
T Consensus 261 a~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~--t~e~a~~~~~----aGad~i~vg~g~gsi~~~ 334 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA--TAEATKALIE----AGANVVKVGIGPGSICTT 334 (511)
T ss_dssp HHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC--SHHHHHHHHH----HTCSEEEECSSCSTTCCH
T ss_pred HHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec--cHHHHHHHHH----hCCCEEEECCCCcccccc
Confidence 334444 68888887664422 2566666554 5799986542 6777666544 566544430 2222
Q ss_pred C--CCCCCCCCCchhHHHHH---h-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 169 M--FGYNDLIVDPRNLEWMR---E-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 169 ~--~~y~~~~~dL~~i~~lk---~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
. .++.. -++.++..+. + .++||+.|.-=. .+ .. ...|.++||+|+++=+-
T Consensus 335 ~~~~g~g~--p~~~~l~~v~~~~~~~~iPVIa~GGI~----------------~~-----~d-i~kala~GA~~V~vGs~ 390 (511)
T 3usb_A 335 RVVAGVGV--PQLTAVYDCATEARKHGIPVIADGGIK----------------YS-----GD-MVKALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHHCCCC--CHHHHHHHHHHHHHTTTCCEEEESCCC----------------SH-----HH-HHHHHHTTCSEEEESTT
T ss_pred ccccCCCC--CcHHHHHHHHHHHHhCCCcEEEeCCCC----------------CH-----HH-HHHHHHhCchhheecHH
Confidence 1 01111 2344444442 2 579998852211 11 23 33568999999999887
Q ss_pred CC
Q 022892 243 DD 244 (290)
Q Consensus 243 ~t 244 (290)
|.
T Consensus 391 ~~ 392 (511)
T 3usb_A 391 FA 392 (511)
T ss_dssp TT
T ss_pred Hh
Confidence 63
No 345
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=75.24 E-value=19 Score=30.95 Aligned_cols=43 Identities=7% Similarity=0.042 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCc
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFL 116 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~ 116 (290)
+.+..+.+.+++.|+.++.++.+....+.+.+ ..+++-+.+++
T Consensus 98 ~e~~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~ 141 (219)
T 2h6r_A 98 ADIEAVINKCKNLGLETIVCTNNINTSKAVAALSPDCIAVEPPE 141 (219)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCSEEEECCCC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCCEEEEEecc
Confidence 34788888999999999999999988777665 24455444433
No 346
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=75.22 E-value=15 Score=33.43 Aligned_cols=64 Identities=19% Similarity=0.302 Sum_probs=41.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCC-CEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGL-PLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIV 91 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~-~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~ 91 (290)
++++-||+|.++. |....++.+++. +++|+ |++.-.. |+ |..+. +++ +.+.+++++..++|++
T Consensus 74 ~grvpViaGvg~~-~t~~ai~la~~A----~~~Ga~davlv~~--------P~-y~~~s-~~~l~~~f~~va~a~~lPii 138 (311)
T 3h5d_A 74 NGRVPLIAGVGTN-DTRDSIEFVKEV----AEFGGFAAGLAIV--------PY-YNKPS-QEGMYQHFKAIADASDLPII 138 (311)
T ss_dssp CSSSCEEEECCCS-SHHHHHHHHHHH----HHSCCCSEEEEEC--------CC-SSCCC-HHHHHHHHHHHHHSCSSCEE
T ss_pred CCCCcEEEeCCCc-CHHHHHHHHHHH----HhcCCCcEEEEcC--------CC-CCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence 4677899999874 566666666554 45796 9876531 22 21222 344 5567788888899988
Q ss_pred E
Q 022892 92 T 92 (290)
Q Consensus 92 s 92 (290)
-
T Consensus 139 l 139 (311)
T 3h5d_A 139 I 139 (311)
T ss_dssp E
T ss_pred E
Confidence 4
No 347
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=75.09 E-value=8.1 Score=34.73 Aligned_cols=87 Identities=11% Similarity=-0.000 Sum_probs=52.0
Q ss_pred EEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEEeecC-
Q 022892 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVTDVHE- 96 (290)
Q Consensus 19 iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s~~~d- 96 (290)
||+|.++. |...+++.+++ |+++|+|++.-. .|+.|+.+. +++ +...+++++..++|++- ++
T Consensus 68 ViaGvg~~-~t~~ai~la~~----A~~~Gadavlv~--------~P~y~~~~s-~~~l~~~f~~va~a~~lPiil--Yn~ 131 (288)
T 2nuw_A 68 LIFQVGSL-NLNDVMELVKF----SNEMDILGVSSH--------SPYYFPRLP-EKFLAKYYEEIARISSHSLYI--YNY 131 (288)
T ss_dssp EEEECCCS-CHHHHHHHHHH----HHTSCCSEEEEC--------CCCSSCSCC-HHHHHHHHHHHHHHCCSCEEE--EEC
T ss_pred eEEeeCCC-CHHHHHHHHHH----HHhcCCCEEEEc--------CCcCCCCCC-HHHHHHHHHHHHHhcCCCEEE--EEC
Confidence 99999974 55566666555 455799997653 122122033 344 55677888999999884 22
Q ss_pred ------cccHHHHhh-hcceecccCCccCCHH
Q 022892 97 ------TVQCEEVGK-VADIIQIPAFLCRQTD 121 (290)
Q Consensus 97 ------~~~~~~l~~-~~d~~kIgs~~~~n~~ 121 (290)
.-+.+.+.+ .+-.+|-.+.++.+..
T Consensus 132 P~~tg~~l~~~~~~~LnIvgiKdssgd~~~~~ 163 (288)
T 2nuw_A 132 PAATGYDIPPSILKSLPVKGIKDTNQDLAHSL 163 (288)
T ss_dssp HHHHSCCCCHHHHTTTTEEEEEECCSCHHHHH
T ss_pred chHhCcCCCHHHHhccEEEEEEeCCCCHHHHH
Confidence 123344444 3556677776665543
No 348
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=74.99 E-value=9.3 Score=35.50 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhc-CCcEEE-eecCcccHHHHhh-hcceecccCCc-------------cCCHHHHHHH----HhcCCeE
Q 022892 74 EGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGK-VADIIQIPAFL-------------CRQTDLLVAA----AKTGKII 133 (290)
Q Consensus 74 ~~l~~L~~~~~~~-Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs~~-------------~~n~~lL~~~----a~~~~PV 133 (290)
..++.++++++.. +++++. .+.+++.+..+.+ .+|++.++..- ......|.++ ...+.||
T Consensus 147 ~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipv 226 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHI 226 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcE
Confidence 4567788888888 898874 8999998888877 69999885321 1122233332 3358999
Q ss_pred EEeCCCCCCHHHHHHHHH
Q 022892 134 NIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 134 ilstG~~~tl~e~~~Ave 151 (290)
+..-|.. +..++..|+.
T Consensus 227 Ia~GGI~-~g~di~kAla 243 (351)
T 2c6q_A 227 ISDGGCS-CPGDVAKAFG 243 (351)
T ss_dssp EEESCCC-SHHHHHHHHH
T ss_pred EEeCCCC-CHHHHHHHHH
Confidence 9999999 9999998864
No 349
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=74.97 E-value=13 Score=33.59 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCCCchhHHHHHh---cCCCEEEeCCC
Q 022892 140 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVDPRNLEWMRE---ANCPVVADVTH 198 (290)
Q Consensus 140 ~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~----~~~~dL~~i~~lk~---~~~pV~~D~sH 198 (290)
..+.+++...++...+.|-+-|=+.=..+.++.+ .+++. +.++.++. .++||.+|+.+
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~-Rv~pvi~~l~~~~~piSIDT~~ 89 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETS-RVIPVVKELAAQGITVSIDTMR 89 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HH-HHHHHHHHHHHTTCCEEEECSC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHH-HHHHHHHHhhcCCCEEEEeCCC
Confidence 3467888877777778887544443222222221 12333 45555555 28899998765
No 350
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=74.82 E-value=9.6 Score=36.85 Aligned_cols=170 Identities=16% Similarity=0.086 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
.+-+.|++..++-+..++-.+||+-++..+.+ ..+.+.+.+..+... .-.+..|.| --|.. +++++.+.++.
T Consensus 52 ~~a~~Lr~ll~~~~~l~~~Ga~D~~sA~~~~~aGf~Aiy~SG~~vAa~---~~~s~~G~P---D~~~~-~~~ev~~~v~r 124 (439)
T 3i4e_A 52 RGAEKLWTLINNEPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGD---ANVAGEMYP---DQSLY-PANSVPLVVKR 124 (439)
T ss_dssp HHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHHTCSCEEECHHHHHHH---TCTTCCCCC---SSSCS-CTTHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEeCCCCCHHHHHHHHHhCCCEEEechHHHhcc---cccccCCCC---CcccC-CHHHHHHHHHH
Confidence 45677888888888888899999999999888 689888888765431 001234555 22444 77888777776
Q ss_pred HHHcC--CCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 022892 153 VRLAG--NPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 230 (290)
Q Consensus 153 i~~~G--n~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAv 230 (290)
|...= ..++...+ +.... ....+| +.+||++|.+.+- |...-+....+..+
T Consensus 125 I~~a~~~ad~i~~~~-~~~~~-~~~~~d---------~~~PviaD~dtGf----------------G~~~~v~~~vk~~~ 177 (439)
T 3i4e_A 125 INNTLTRADQIQWSE-GKNPG-DEGYVD---------FFAPIVADAEAGF----------------GGVLNAFELMKAMI 177 (439)
T ss_dssp HHHHHHHHHHHHHHT-TCCTT-STTCCC---------CCCCEEEECTTTT----------------SSHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhhhhh-ccccc-cccccC---------CCCCeEEECCCCC----------------CccHHHHHHHHHHH
Confidence 54210 00000000 00000 000011 3489999999874 32223445556678
Q ss_pred HcCCCEEEEeeeCC-CCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 231 AVGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 231 a~GA~G~~IEkH~t-~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
.+||.|+.||-... |.|-- -+++.-.+.+++-+-++.+|.....+|.
T Consensus 178 ~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~ 226 (439)
T 3i4e_A 178 EAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGT 226 (439)
T ss_dssp HHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 89999999997653 33311 1445556666665555555555555565
No 351
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=74.61 E-value=14 Score=34.88 Aligned_cols=110 Identities=19% Similarity=0.172 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHHH-HHcCCCEEeccccccC-CCCCcccCCC--CChhHHHHHHHHHHHhcCCcEEE--eecC-----
Q 022892 28 SEEHIMRMAKHIKSIS-TKVGLPLVFKSSFDKA-NRTSSKSFRG--PGMVEGLKILEKVKIAYDIPIVT--DVHE----- 96 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a-~~~G~~~V~~~~~~k~-~rts~~~~~g--~~~~~~l~~L~~~~~~~Gi~~~s--~~~d----- 96 (290)
|++..+++|..+++.. +++|.+.|-....+-. .|.....|.- -.+..|++.|.+++++.|+.|.- +++.
T Consensus 24 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~~ 103 (397)
T 3a5v_A 24 DEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCGG 103 (397)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTS
T ss_pred CHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCccCC
Confidence 7777888888777632 2268887766654432 3433333321 11235899999999999999754 4442
Q ss_pred --------cccHHHHhh-hcceecccCCcc-----------CCHHHHH-HHHhcCCeEEEeC
Q 022892 97 --------TVQCEEVGK-VADIIQIPAFLC-----------RQTDLLV-AAAKTGKIINIKK 137 (290)
Q Consensus 97 --------~~~~~~l~~-~~d~~kIgs~~~-----------~n~~lL~-~~a~~~~PVilst 137 (290)
...++.+++ .+|++|+.--.. ..+.++. ++.+++.||+++.
T Consensus 104 ~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~~~~~~~~~~~y~~m~~~L~~~~~~i~~~~ 165 (397)
T 3a5v_A 104 HIASLGYEDIDAKTWAKWGIDYLKYDNCYNQGQSGTPKLSYDRYKAMGNALNKTGRPMLYSL 165 (397)
T ss_dssp CBCCTTCHHHHHHHHHHHTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHTCSCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCcCCCcchhHHHHHHHHHHHHhhCCCcEEEe
Confidence 224555666 699999875322 1122222 5566777777663
No 352
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=74.42 E-value=36 Score=31.19 Aligned_cols=146 Identities=12% Similarity=0.073 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc-EEEeecCcc--------
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP-IVTDVHETV-------- 98 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~-~~s~~~d~~-------- 98 (290)
+.....+.+.+=.+.++++|...+.-.+-. +. ...+..+.+.+++.|+. ++++=+.+.
T Consensus 57 ~~~~~~~~~~~el~~a~~aGv~tiV~~~~~-----------~~--~r~~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~ 123 (339)
T 3gtx_A 57 DHAAALASCTETARALLARGIQTVVDATPN-----------GC--GRNPAFLREVSEATGLQILCATGFYYEGGGATTYF 123 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEECCCT-----------TT--TCCHHHHHHHHHHHCCEEECEECCCCTTTSSCHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEecCCC-----------cc--CcCHHHHHHHHHHcCCcEEEEcCCCccCccCCcCC
Confidence 344555555555555677897665543211 11 13466777788888874 445656552
Q ss_pred --------cHHHHhhh-c--------------ceecccCCc--cC--CHHH----HHHHHhcCCeEEEeCCCCCCHHHHH
Q 022892 99 --------QCEEVGKV-A--------------DIIQIPAFL--CR--QTDL----LVAAAKTGKIINIKKGQFCASSVMV 147 (290)
Q Consensus 99 --------~~~~l~~~-~--------------d~~kIgs~~--~~--n~~l----L~~~a~~~~PVilstG~~~tl~e~~ 147 (290)
+++.|.+. . -+++||... .+ +... ++.+..+++||++-+|..-.-.+
T Consensus 124 ~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~~-- 201 (339)
T 3gtx_A 124 KFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGPQ-- 201 (339)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHHH--
T ss_pred cccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH--
Confidence 22334321 1 112444332 22 2222 24455789999999975312223
Q ss_pred HHHHHHHHcCCC--cEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeC
Q 022892 148 NSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADV 196 (290)
Q Consensus 148 ~Ave~i~~~Gn~--~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~ 196 (290)
.++++++.|.+ +++++||..+ . ++.....+-+.|+-|+||.
T Consensus 202 -~~~iL~~~~~~~~~~vi~H~~~~---~----~~e~a~~~l~~G~~i~~~g 244 (339)
T 3gtx_A 202 -QAELLTSLGADPARIMIGHMDGN---T----DPAYHRETLRHGVSIAFDR 244 (339)
T ss_dssp -HHHHHHHTTCCGGGEEECCGGGC---C----CHHHHHHHHTTTCEEEECC
T ss_pred -HHHHHHHcCCCcccEEEEccCCC---C----CHHHHHHHHHcCcEEEEcc
Confidence 36677777654 5788999632 1 2223333333577788854
No 353
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=74.28 E-value=10 Score=36.53 Aligned_cols=166 Identities=14% Similarity=0.084 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 152 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~ 152 (290)
.+-+.|++..++.+..++-.+||+-++..+.+ ..+.+.+++..+....- .+..|.|= -|.. +++|+.+.++.
T Consensus 52 ~~a~~lr~lL~~~~~~~~~ga~d~~sA~~~~~aGf~Aiy~SG~~vAa~~~---~s~~G~PD---~~~~-~~~ev~~~v~~ 124 (429)
T 1f8m_A 52 RGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDAN---LSGHTYPD---QSLY-PANSVPQVVRR 124 (429)
T ss_dssp HHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHTTCSCEEECHHHHHHHCC---TTCCCCCS---SSCS-CTTHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceecCCCCCHHHHHHHHHcCCCEEEechHHHhcccc---cccCCCCC---cccC-CHHHHHHHHHH
Confidence 44556888888888888889999999988877 58888887765432100 02446552 2444 77777777765
Q ss_pred HHHcC--CCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 022892 153 VRLAG--NPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 230 (290)
Q Consensus 153 i~~~G--n~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAv 230 (290)
|...- .+++...+ |. -+ ++ .+.+||++|.+.+- |...-+....+..+
T Consensus 125 I~~a~~~~d~~~~~~-~~---~~---~~--------d~~~PIiaD~DtGf----------------G~~~nv~~tvk~~i 173 (429)
T 1f8m_A 125 INNALQRADQIAKIE-GD---TS---VE--------NWLAPIVADGEAGF----------------GGALNVYELQKALI 173 (429)
T ss_dssp HHHHHHHHHHHHHHH-TC---CS---CS--------CSSCCEEEECTTTT----------------SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh-cc---Cc---cc--------cCCCCEEEECCCCC----------------CCcHHHHHHHHHHH
Confidence 54220 00010101 00 00 10 12489999999874 32223445566678
Q ss_pred HcCCCEEEEeeeC-CCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 231 AVGVDGVFMEVHD-DPLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 231 a~GA~G~~IEkH~-t~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
.+||.|+.||-.. .|.|-- -+++.-.+.+++-+-++..|.....+|.
T Consensus 174 ~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~ 222 (429)
T 1f8m_A 174 AAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADV 222 (429)
T ss_dssp HTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTC
T ss_pred HcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCC
Confidence 8999999999775 343321 1444445556655555555555544565
No 354
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=73.96 E-value=23 Score=29.90 Aligned_cols=23 Identities=9% Similarity=0.284 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHcCCCEEec
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFK 53 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~ 53 (290)
-..++.+.+.+.+++.|..++..
T Consensus 22 ~~~~~~~gi~~~~~~~g~~~~~~ 44 (277)
T 3e61_A 22 FFTLIARGVEDVALAHGYQVLIG 44 (277)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE
Confidence 34556666666666666665543
No 355
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=73.84 E-value=18 Score=33.35 Aligned_cols=88 Identities=17% Similarity=0.172 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHHH-HHcCCCEEeccccccC-CCCCcccCCC--CChhHHHHHHHHHHHhcCCcEEE--eecC-----
Q 022892 28 SEEHIMRMAKHIKSIS-TKVGLPLVFKSSFDKA-NRTSSKSFRG--PGMVEGLKILEKVKIAYDIPIVT--DVHE----- 96 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a-~~~G~~~V~~~~~~k~-~rts~~~~~g--~~~~~~l~~L~~~~~~~Gi~~~s--~~~d----- 96 (290)
|++..+++|..+++.. +++|.+.|-....+-. .|.....|.- -.+..|++.|.+++++.|+.|.- ++..
T Consensus 24 ~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~ 103 (362)
T 1uas_A 24 NEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSN 103 (362)
T ss_dssp CHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTS
T ss_pred CHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCccccC
Confidence 6777788887774421 4579888777655432 3433333321 11235899999999999999753 4432
Q ss_pred ---------cccHHHHhh-hcceecccCC
Q 022892 97 ---------TVQCEEVGK-VADIIQIPAF 115 (290)
Q Consensus 97 ---------~~~~~~l~~-~~d~~kIgs~ 115 (290)
...++.+++ .+|++|+.-.
T Consensus 104 ~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 104 KMPGSLDHEEQDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp SSBCCTTCHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCchhHHHHHHHHHHHcCCCEEEECcc
Confidence 123344555 5889988763
No 356
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=73.80 E-value=8.8 Score=34.93 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=42.1
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccC--CCCChhHH-HHHHHHHHHhcCCcE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSF--RGPGMVEG-LKILEKVKIAYDIPI 90 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~--~g~~~~~~-l~~L~~~~~~~Gi~~ 90 (290)
++++-||||.++. |...+++.+++ |+++|+|++.-. .||.+ .++. +++ +...+++++..++|+
T Consensus 75 ~grvpviaGvg~~-~t~~ai~la~~----A~~~Gadavlv~--------~Pyy~~~~~~s-~~~l~~~f~~va~a~~lPi 140 (309)
T 3fkr_A 75 AGRVPVIVTTSHY-STQVCAARSLR----AQQLGAAMVMAM--------PPYHGATFRVP-EAQIFEFYARVSDAIAIPI 140 (309)
T ss_dssp TTSSCEEEECCCS-SHHHHHHHHHH----HHHTTCSEEEEC--------CSCBTTTBCCC-HHHHHHHHHHHHHHCSSCE
T ss_pred CCCCcEEEecCCc-hHHHHHHHHHH----HHHcCCCEEEEc--------CCCCccCCCCC-HHHHHHHHHHHHHhcCCCE
Confidence 4678899999874 56666666655 455799997653 12211 1233 444 455678888889998
Q ss_pred EE
Q 022892 91 VT 92 (290)
Q Consensus 91 ~s 92 (290)
+-
T Consensus 141 il 142 (309)
T 3fkr_A 141 MV 142 (309)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 357
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=73.50 E-value=46 Score=35.86 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=65.7
Q ss_pred HHHHHHhcCCeEEEe--CCC------C--CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCC
Q 022892 122 LLVAAAKTGKIINIK--KGQ------F--CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANC 190 (290)
Q Consensus 122 lL~~~a~~~~PVils--tG~------~--~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~ 190 (290)
.++++-+.++.|... ... . .+++.+.+.++.+...|.+.|.|+.-... ..|.. + ..-+..+++ +++
T Consensus 677 ~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~~-~-~~lv~~l~~~~~~ 753 (1165)
T 2qf7_A 677 SMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGL-LKPAA-A-KVLFKALREATGL 753 (1165)
T ss_dssp HHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCC-CCHHH-H-HHHHHHHHHHCSS
T ss_pred HHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCC-cCHHH-H-HHHHHHHHHhcCC
Confidence 345555677766543 211 1 37888999999999999988888776542 12221 1 245667777 889
Q ss_pred CEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 191 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 191 pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
||.+ +.|-. .| +...-+.+|+.+||+ +|+.-+.
T Consensus 754 ~i~~-H~Hnd---------------~G---lAvAn~laAv~aGa~--~vd~ti~ 786 (1165)
T 2qf7_A 754 PIHF-HTHDT---------------SG---IAAATVLAAVEAGVD--AVDAAMD 786 (1165)
T ss_dssp CEEE-EECBT---------------TS---CHHHHHHHHHHTTCS--EEEEBCG
T ss_pred eEEE-EECCC---------------CC---HHHHHHHHHHHhCCC--EEEeccc
Confidence 9999 88863 12 335567789999998 8887554
No 358
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=72.98 E-value=28 Score=26.39 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=51.0
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 231 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva 231 (290)
...++++|+.-.. +.. --+..+..+++ .++||++=+++. . ......+..
T Consensus 57 ~~~~dliilD~~l----~~~-~g~~~~~~lr~~~~~~~~pii~~t~~~-----------------~-----~~~~~~~~~ 109 (152)
T 3heb_A 57 AGRAQLVLLDLNL----PDM-TGIDILKLVKENPHTRRSPVVILTTTD-----------------D-----QREIQRCYD 109 (152)
T ss_dssp TTCBEEEEECSBC----SSS-BHHHHHHHHHHSTTTTTSCEEEEESCC-----------------C-----HHHHHHHHH
T ss_pred cCCCCEEEEeCCC----CCC-cHHHHHHHHHhcccccCCCEEEEecCC-----------------C-----HHHHHHHHH
Confidence 4457788877542 110 12344555665 257887745554 2 455667889
Q ss_pred cCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 232 VGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 232 ~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+||++ +|.|-+ ++++|...++.+...+..+..
T Consensus 110 ~g~~~-~l~KP~-------------~~~~l~~~i~~~~~~~~~~~~ 141 (152)
T 3heb_A 110 LGANV-YITKPV-------------NYENFANAIRQLGLFFSVMQV 141 (152)
T ss_dssp TTCSE-EEECCS-------------SHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCcE-EEeCCC-------------CHHHHHHHHHHHHHHHHHcCC
Confidence 99997 566654 577888888888777766654
No 359
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=72.59 E-value=32 Score=32.16 Aligned_cols=106 Identities=17% Similarity=0.056 Sum_probs=56.7
Q ss_pred hcceecccCCccC---CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----eecC----CCC
Q 022892 106 VADIIQIPAFLCR---QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ERGT----MFG 171 (290)
Q Consensus 106 ~~d~~kIgs~~~~---n~~lL~~~a~~--~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~-----~~gs----~~~ 171 (290)
.+|++.|.+..-. -.++++++.+. ++||++.+.. +.++.+.+. ..|-+-|.+- +|.+ .++
T Consensus 165 G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~--~~~~a~~a~----~~Gad~I~vg~~~G~~~~~~~~~~~g 238 (404)
T 1eep_A 165 HVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIV--TKEAALDLI----SVGADCLKVGIGPGSICTTRIVAGVG 238 (404)
T ss_dssp TCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEEC--SHHHHHHHH----TTTCSEEEECSSCSTTSHHHHHHCCC
T ss_pred CCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCC--cHHHHHHHH----hcCCCEEEECCCCCcCcCccccCCCC
Confidence 4777776221111 13455555554 7999996543 577666553 4675444441 1111 011
Q ss_pred CCCCCCCchhHHHHHh----cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 172 YNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 172 y~~~~~dL~~i~~lk~----~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
.+ ++..+..+++ .++||+.+..=.. ..-+..++++||+++++=+-+
T Consensus 239 ~p----~~~~l~~v~~~~~~~~ipVia~GGI~~----------------------~~d~~~ala~GAd~V~iG~~~ 288 (404)
T 1eep_A 239 VP----QITAICDVYEACNNTNICIIADGGIRF----------------------SGDVVKAIAAGADSVMIGNLF 288 (404)
T ss_dssp CC----HHHHHHHHHHHHTTSSCEEEEESCCCS----------------------HHHHHHHHHHTCSEEEECHHH
T ss_pred cc----hHHHHHHHHHHHhhcCceEEEECCCCC----------------------HHHHHHHHHcCCCHHhhCHHH
Confidence 11 3445555544 4789987533211 233446788999999994443
No 360
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=72.58 E-value=6.2 Score=36.04 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=60.9
Q ss_pred HHH--HHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc--CCcEEE--eecCcccHHHHhh-h
Q 022892 34 RMA--KHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY--DIPIVT--DVHETVQCEEVGK-V 106 (290)
Q Consensus 34 e~A--k~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~--Gi~~~s--~~~d~~~~~~l~~-~ 106 (290)
+.| ++....++.+|+++|+..+-. + ....+.++++++.. ++|++. =+.+++++..+.+ .
T Consensus 184 e~A~~~aYa~~gad~G~~lV~LD~~~----------~----~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG 249 (286)
T 3vk5_A 184 STEEIDRYLHVARAFGFHMVYLYSRN----------E----HVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG 249 (286)
T ss_dssp SSHHHHHHHHHHHHTTCSEEEEECSS----------S----CCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCC----------C----cCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC
Confidence 455 555566677899999876311 1 12356677777778 899888 4788888887766 7
Q ss_pred cceecccCCccCC--HHHHHHHHh
Q 022892 107 ADIIQIPAFLCRQ--TDLLVAAAK 128 (290)
Q Consensus 107 ~d~~kIgs~~~~n--~~lL~~~a~ 128 (290)
+|.+.|||.-..| .++++++++
T Consensus 250 AD~VVVGSAav~d~~Pelv~e~a~ 273 (286)
T 3vk5_A 250 ADYVGFAGALEQPDWRSALAEIAG 273 (286)
T ss_dssp CSEEEESGGGSSTTHHHHHHHHHC
T ss_pred CCEEEECchhhcCCCHHHHHHHHH
Confidence 9999999999999 899998874
No 361
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=72.55 E-value=8.2 Score=36.05 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceecccCC----------ccCCHHHHHHHHh--------cC---C
Q 022892 75 GLKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIPAF----------LCRQTDLLVAAAK--------TG---K 131 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs~----------~~~n~~lL~~~a~--------~~---~ 131 (290)
.+..+.+++++.++|++. .+.+++.+..+.+ .+|.+.||.+ ...+...|.++.+ .+ .
T Consensus 199 ~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~i 278 (393)
T 2qr6_A 199 EALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYV 278 (393)
T ss_dssp ---CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcce
Confidence 344466777778999987 7888888888877 6999999762 1344555544333 33 8
Q ss_pred eEEEeCCCCCCHHHHHHHHH
Q 022892 132 IINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 132 PVilstG~~~tl~e~~~Ave 151 (290)
||+.+-|.. +..++..|+.
T Consensus 279 pvia~GGI~-~~~dv~kala 297 (393)
T 2qr6_A 279 HIIADGSIE-NSGDVVKAIA 297 (393)
T ss_dssp EEEECSSCC-SHHHHHHHHH
T ss_pred EEEEECCCC-CHHHHHHHHH
Confidence 999999998 9999888764
No 362
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=72.55 E-value=62 Score=30.09 Aligned_cols=78 Identities=13% Similarity=-0.031 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
+++++...++.+...|-.-|++..+.....++. ..+...+..+|+ +++||+....-+
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~~vr~~~~iPvi~~G~i~--------------------- 311 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKTAWEK-IECTESLVPMRKAYKGTFIVAGGYD--------------------- 311 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC-------CCCCSHHHHHHCCSCEEEESSCC---------------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCc-cccHHHHHHHHHHcCCCEEEeCCCC---------------------
Confidence 466777777777777765555543321111221 123345667787 889998732221
Q ss_pred cHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 221 LIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 221 ~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+..+..+++.| ||++++=+-+
T Consensus 312 --~~~a~~~l~~g~aD~V~~gR~~ 333 (376)
T 1icp_A 312 --REDGNRALIEDRADLVAYGRLF 333 (376)
T ss_dssp --HHHHHHHHHTTSCSEEEESHHH
T ss_pred --HHHHHHHHHCCCCcEEeecHHH
Confidence 45667778887 9988887665
No 363
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=72.27 E-value=62 Score=29.96 Aligned_cols=137 Identities=14% Similarity=0.159 Sum_probs=73.6
Q ss_pred HHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc-EEEeecC-----cc-----cHHHHhhh
Q 022892 38 HIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP-IVTDVHE-----TV-----QCEEVGKV 106 (290)
Q Consensus 38 ~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~-~~s~~~d-----~~-----~~~~l~~~ 106 (290)
+..+.++++|...|.-.+-. +.+ ..+..+.+.+++.|+. ++++=+. |. +++.+.+.
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~-----------g~g--r~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~ 156 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCR-----------GIG--RDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADE 156 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCB-----------TTT--CCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEeCCC-----------ccc--CCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHH
Confidence 33344556798766543211 122 2467788888889975 4445455 54 45555441
Q ss_pred -cc---------------eecccCCc-cC--CHHHH----HHHHhcCCeEEEeC-CCCCCHHHHHHHHHHHHHcCCC--c
Q 022892 107 -AD---------------IIQIPAFL-CR--QTDLL----VAAAKTGKIINIKK-GQFCASSVMVNSAEKVRLAGNP--N 160 (290)
Q Consensus 107 -~d---------------~~kIgs~~-~~--n~~lL----~~~a~~~~PVilst-G~~~tl~e~~~Ave~i~~~Gn~--~ 160 (290)
++ +-.||... .+ +...+ +.+..+++||++-+ |-.-...|+.. ++++.|-+ +
T Consensus 157 ~~~ei~~Gi~~~~vkag~IGEiGld~~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~---iL~e~g~~~~~ 233 (364)
T 3k2g_A 157 IVAEALEGTDGTDARIGLIGEIGVSSDFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLD---LVEEEGADLRH 233 (364)
T ss_dssp HHHHHHTCBTTBSCCCSSEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHH---HHHHTTCCGGG
T ss_pred HHHHHHhccccCCcceeEEEEEEcCCCCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHH---HHHHcCCCCCc
Confidence 11 22455442 22 22333 33456899999997 33114555544 55666644 5
Q ss_pred EEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeC
Q 022892 161 VMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADV 196 (290)
Q Consensus 161 i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~ 196 (290)
++++||-.+ + .|+.....+-+.|+-|+||.
T Consensus 234 vvi~H~~~s-~-----~~~e~a~~~l~~G~~I~f~g 263 (364)
T 3k2g_A 234 TVLCHMNPS-H-----MDPVYQATLAQRGAFLEFDM 263 (364)
T ss_dssp EEECCCGGG-T-----TCHHHHHHHHHHTCEEEECC
T ss_pred eEEECCCCC-C-----CCHHHHHHHHhCCcEEEecC
Confidence 888999632 1 13333333333577788863
No 364
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=72.23 E-value=17 Score=35.11 Aligned_cols=113 Identities=11% Similarity=0.092 Sum_probs=68.2
Q ss_pred ceecccCCccCCHHHHHHHHhcCC-eEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchh
Q 022892 108 DIIQIPAFLCRQTDLLVAAAKTGK-IINIKK-----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRN 181 (290)
Q Consensus 108 d~~kIgs~~~~n~~lL~~~a~~~~-PVilst-----G~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~ 181 (290)
+.+-++ ++ .+..+.+++--.|. |+.+.. ...++++.++++++... .++. .+++-..+.|+ +...-|++.
T Consensus 145 ~~viv~-r~-aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~-~~~~-~~Vv~t~t~~g-~g~~ddl~~ 219 (450)
T 3bc8_A 145 KYIIWP-RI-DQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELG-PEHI-LCLHSTTACFA-PRVPDRLEE 219 (450)
T ss_dssp CEEEEE-CC-CCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHC-GGGE-EEEEEESSCCT-TBCCCCHHH
T ss_pred CEEEEE-CC-cHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcC-CCCE-EEEEEECCcCC-CceecCHHH
Confidence 445455 55 77777777765555 565544 22348999999876432 1222 22222222222 123458899
Q ss_pred HHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc-CCCEEEEeee
Q 022892 182 LEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV-GVDGVFMEVH 242 (290)
Q Consensus 182 i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~-GA~G~~IEkH 242 (290)
|..+-+ +++|+.+|.-|+. .-.....+...+... |||.++.=.|
T Consensus 220 Ia~ia~~~gi~l~VD~A~G~-----------------~~~~~~~l~~~a~~~~~AD~~v~S~H 265 (450)
T 3bc8_A 220 LAVICANYDIPHVVNNAYGL-----------------QSSKCMHLIQQGARVGRIDAFVQSLD 265 (450)
T ss_dssp HHHHHHHHTCCEEEECTTTT-----------------TCHHHHHHHHHHHHHSCCCEEEEEHH
T ss_pred HHHHHHHCCCeEEEECCCch-----------------hhhhhHhHHHHHhcccCCCEEEECCc
Confidence 988876 8999999999984 112234455566776 8997766655
No 365
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.14 E-value=4.6 Score=35.96 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc--EEEeecC
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP--IVTDVHE 96 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~--~~s~~~d 96 (290)
++..++..++.++.|+++|+..|....+. ++.+...|+. ..+.|.++.+++++.||. +.-+.+.
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~--~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMMP--TITTHDEAKL--VCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCC--CCCSHHHHHH--HHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCC--CCCCHHHHHH--HHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 47789999999999999999987654322 2211111211 136788899999999999 9988875
No 366
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=71.98 E-value=81 Score=31.19 Aligned_cols=93 Identities=15% Similarity=-0.012 Sum_probs=57.5
Q ss_pred CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC------CCCCCchhHHHHHh-cCCCEEEeC
Q 022892 130 GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN------DLIVDPRNLEWMRE-ANCPVVADV 196 (290)
Q Consensus 130 ~~PVilstG~------~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~------~~~~dL~~i~~lk~-~~~pV~~D~ 196 (290)
++||.++-.. ..++++....++.+...|-.-+++--+.....++ ..-.++..+..+|+ +++||+...
T Consensus 208 ~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~G 287 (671)
T 1ps9_A 208 DFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTN 287 (671)
T ss_dssp SSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECS
T ss_pred CceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeC
Confidence 7899885432 2378888888888888886655543221111111 11123456677777 789998732
Q ss_pred CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeCC
Q 022892 197 THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 244 (290)
Q Consensus 197 sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~t 244 (290)
.-. . +..+..+++.| ||++++=+-+-
T Consensus 288 gi~-----------------~-----~~~a~~~l~~g~aD~V~~gR~~l 314 (671)
T 1ps9_A 288 RIN-----------------D-----PQVADDILSRGDADMVSMARPFL 314 (671)
T ss_dssp SCC-----------------S-----HHHHHHHHHTTSCSEEEESTHHH
T ss_pred CCC-----------------C-----HHHHHHHHHcCCCCEEEeCHHHH
Confidence 211 1 56677788888 99888877553
No 367
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=71.95 E-value=10 Score=37.62 Aligned_cols=167 Identities=14% Similarity=0.147 Sum_probs=93.9
Q ss_pred HHHHHHHhcCCcEEEeecCcccHHHHhhhcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 78 ILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 78 ~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
.|++..+.-+..++-.+||+-++-.++...+.+.+++..+..... .+..+.| -.|.- +++++.+.++.|...-
T Consensus 62 ~lr~l~~~~~~l~~pga~D~~sA~~~~~gf~Aiy~SG~~vAas~~---~~~~G~P---D~~~~-~~~ev~~~v~~I~~a~ 134 (538)
T 1dqu_A 62 ILERNFKNKEASFTYGCLDPTMVTQMAKYLDTVYVSGWQSSSTAS---STDEPSP---DLADY-PMNTVPNKVNHLWMAQ 134 (538)
T ss_dssp HHHHHHHHTCCEEEEBCCSHHHHHHHHHHCSCEEECHHHHHHHCC---TTCCCCS---SCSCS-CTTHHHHHHHHHHHHH
T ss_pred HHHHhhccCCcEEecCCCCHHHHHHHHhcCCeeecccHHHHhhcc---cccCCCC---CCCcC-CHHHHHHHHHHHHHHH
Confidence 344444556888888999999987776667777777765542110 0234777 34555 8888888888764320
Q ss_pred C--CcEEEEeecCCCCCCCCCCCchhHHHHH--h--cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 022892 158 N--PNVMVCERGTMFGYNDLIVDPRNLEWMR--E--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 231 (290)
Q Consensus 158 n--~~i~L~~~gs~~~y~~~~~dL~~i~~lk--~--~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva 231 (290)
. ++.---+|-. .+. .. .-+ . +.+||++|.+.+- |...-+....+..+.
T Consensus 135 ~~~D~~q~~~r~~---~~~------~~-~~~~~~~d~~lPIiaD~DtGf----------------G~~~nv~~tvk~~ie 188 (538)
T 1dqu_A 135 LFHDRKQREERMT---TPK------DQ-RHKVANVDYLRPIIADADTGH----------------GGLTAVMKLTKLFVE 188 (538)
T ss_dssp HHHHHHHHHHHHS---SCH------HH-HTTSCCCCCCCCEEEECTTCS----------------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhc---cch------hh-hccccccCcCCceEEecCCcC----------------CchHHHHHHHHHHHH
Confidence 0 0000000000 000 00 000 0 2389999999874 333334556667788
Q ss_pred cCCCEEEEeeeCC-CCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 232 VGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 232 ~GA~G~~IEkH~t-~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
+||.|+.||-... |.|-- -+++.-.+.+++-.=++..|.....+|.
T Consensus 189 AGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~AAr~A~d~~g~ 236 (538)
T 1dqu_A 189 RGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGT 236 (538)
T ss_dssp TTCSEEEECSBCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 9999999998753 43321 1444455666666555555555555565
No 368
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=71.85 E-value=20 Score=33.55 Aligned_cols=82 Identities=16% Similarity=0.168 Sum_probs=58.9
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCC---EEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLP---LVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~---~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
++++.+=+-|....|.++.++.|++|.++.++.|++ ++.+- |-| ++|++..+++.++ ||.+
T Consensus 117 ~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKI-----P~T----------~eGi~A~~~L~~e-GI~v 180 (345)
T 3tkf_A 117 EGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMI-----AAT----------WEGIKAAKLLQKE-GINC 180 (345)
T ss_dssp SSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECS----------HHHHHHHHHHHHT-TCCE
T ss_pred CCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhcCCCCCcEEEEe-----CCC----------HHHHHHHHHHHHC-CCcE
Confidence 455554444443468999999999999999888875 33332 211 4789888888765 9999
Q ss_pred -EEeecCcccHHHHhh-hcceec
Q 022892 91 -VTDVHETVQCEEVGK-VADIIQ 111 (290)
Q Consensus 91 -~s~~~d~~~~~~l~~-~~d~~k 111 (290)
+|-+|+..++-...+ ++.++.
T Consensus 181 N~TliFS~~Qa~~aAeAGa~~IS 203 (345)
T 3tkf_A 181 NLTLIFDKAQAKACAEAGVYLVS 203 (345)
T ss_dssp EEEEECCHHHHHHHHHTTCSEEE
T ss_pred EEEEeCCHHHHHHHHHcCCcEEE
Confidence 778999999888776 555543
No 369
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=71.67 E-value=28 Score=31.06 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=69.1
Q ss_pred EEEccCCccCHHHHHHHHHHHHHHHHHcCCC---EEeccccccCCCCCcc-cCCCCChhHHHHHHHHHHHhcCCcEEEee
Q 022892 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLP---LVFKSSFDKANRTSSK-SFRGPGMVEGLKILEKVKIAYDIPIVTDV 94 (290)
Q Consensus 19 iIAgpcsien~~~~le~Ak~L~~~a~~~G~~---~V~~~~~~k~~rts~~-~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~ 94 (290)
+|+.++. .+.+...+.|+++.+. |+| +|-..... |.+... .|. ...+.-++.++++.+..++|++.-.
T Consensus 96 ~~~~i~g-~~~~~~~~~a~~~~~~----g~d~~~~iein~~~--P~~~g~~~~g-~~~~~~~~ii~~vr~~~~~Pv~vK~ 167 (314)
T 2e6f_A 96 LFLSISG-LSVEENVAMVRRLAPV----AQEKGVLLELNLSC--PNVPGKPQVA-YDFEAMRTYLQQVSLAYGLPFGVKM 167 (314)
T ss_dssp EEEEECC-SSHHHHHHHHHHHHHH----HHHHCCEEEEECCC--CCSTTCCCGG-GSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred EEEEeCC-CCHHHHHHHHHHHHHh----CCCcCceEEEEcCC--CCCCCchhhc-CCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 4444443 2667788888888774 667 55443222 222000 121 1112334556666666688887532
Q ss_pred ---cCccc----HHHHhh-h-cceecccCCc-----c-------------------------CCHHHHHHHHh-c-CCeE
Q 022892 95 ---HETVQ----CEEVGK-V-ADIIQIPAFL-----C-------------------------RQTDLLVAAAK-T-GKII 133 (290)
Q Consensus 95 ---~d~~~----~~~l~~-~-~d~~kIgs~~-----~-------------------------~n~~lL~~~a~-~-~~PV 133 (290)
++.++ ++.+.+ . +|++.+..+. + ...++++++.+ . +.||
T Consensus 168 ~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipv 247 (314)
T 2e6f_A 168 PPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLV 247 (314)
T ss_dssp CCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCE
Confidence 34344 333344 5 8877655433 0 12466666654 4 7899
Q ss_pred EEeCCCCCCHHHHHHHH
Q 022892 134 NIKKGQFCASSVMVNSA 150 (290)
Q Consensus 134 ilstG~~~tl~e~~~Av 150 (290)
+..-|.. |.+++..++
T Consensus 248 i~~GGI~-~~~da~~~l 263 (314)
T 2e6f_A 248 FGCGGVY-SGEDAFLHI 263 (314)
T ss_dssp EEESSCC-SHHHHHHHH
T ss_pred EEECCCC-CHHHHHHHH
Confidence 9999988 888877764
No 370
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=71.42 E-value=70 Score=34.40 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCc
Q 022892 141 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 219 (290)
Q Consensus 141 ~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~ 219 (290)
.+++.+.+.++.+...|.+.|.|+.-... ..|. .+ ..-+..+++ .++||.+ +.|.. .|
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~-~~P~-~~-~~lv~~l~~~~~~~i~~-H~Hnt---------------~G-- 747 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGL-LKPK-AA-YELIGELKSAVDLPIHL-HTHDT---------------SG-- 747 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCC-CCHH-HH-HHHHHHHHHHCCSCEEE-EECBT---------------TS--
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCC-CCHH-HH-HHHHHHHHHhcCCeEEE-EeCCC---------------Cc--
Confidence 37888999999999999887777776542 1221 11 245666777 8999999 88864 12
Q ss_pred ccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 220 ELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 220 ~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+...-+.+|+.+||+ +|+.-.
T Consensus 748 -~a~An~laA~~aGa~--~vD~ai 768 (1150)
T 3hbl_A 748 -NGLLTYKQAIDAGVD--IIDTAV 768 (1150)
T ss_dssp -CHHHHHHHHHHTTCS--EEEEBC
T ss_pred -HHHHHHHHHHHhCCC--EEEEec
Confidence 225567789999998 777654
No 371
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=71.41 E-value=61 Score=29.54 Aligned_cols=121 Identities=10% Similarity=0.018 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCC------------cc------cCCCCChhHHHHHHHHHHHhcCCc
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTS------------SK------SFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts------------~~------~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
+.+...+.|++.++ .|++.+|.-. . |+.. +. ...++..++ ++.+ +.++++|+.
T Consensus 141 ~~~~~~~~a~~~~~----~Gf~~vKik~-~--~~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-~~~~-~~l~~~~i~ 211 (368)
T 1sjd_A 141 TIPQLLDVVGGYLD----EGYVRIKLKI-E--PGWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-APQL-ARLDPFGLL 211 (368)
T ss_dssp CHHHHHHHHHHHHH----HTCSEEEEEC-B--TTBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-HHHH-HTTGGGCCS
T ss_pred CHHHHHHHHHHHHH----hCccEEEEec-C--chhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-HHHH-HHHHhcCCC
Confidence 56667777777765 4999988531 1 1110 00 112333334 4443 335778888
Q ss_pred EEEeecCcccHHHHhhh---cceecccCCccCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 022892 90 IVTDVHETVQCEEVGKV---ADIIQIPAFLCRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLAG 157 (290)
Q Consensus 90 ~~s~~~d~~~~~~l~~~---~d~~kIgs~~~~n~~lL~~~a~~~--~PVilstG~~~tl~e~~~Ave~i~~~G 157 (290)
++-+|+.+.+++.+... +++=-++...+++..-++.+-..+ -=|.+|-...|.+.+++.+++..++.|
T Consensus 212 ~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 284 (368)
T 1sjd_A 212 LIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHG 284 (368)
T ss_dssp EEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred eEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcC
Confidence 88888777666665442 222222233345555445444333 246777777777777777777766665
No 372
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=71.31 E-value=15 Score=31.74 Aligned_cols=74 Identities=14% Similarity=0.099 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHH
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 223 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~ 223 (290)
+....++.+...|-..+++......... ...|+..+..+++ .++||+++.. .+. +
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~Gg--------------------i~~--~ 91 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIASGG--------------------AGK--M 91 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS--SCCCHHHHHHHGGGCCSCEEEESC--------------------CCS--H
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC--CcccHHHHHHHHHhCCCCEEEeCC--------------------CCC--H
Confidence 3444555666788877777654332111 2246778888888 8999988422 111 3
Q ss_pred HHHHHHHHcCCCEEEEeee
Q 022892 224 CIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 224 ~~a~aAva~GA~G~~IEkH 242 (290)
.-+..+.+.||+|++|=+.
T Consensus 92 ~~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 92 EHFLEAFLRGADKVSINTA 110 (247)
T ss_dssp HHHHHHHHTTCSEECCSHH
T ss_pred HHHHHHHHcCCCeeehhhH
Confidence 4455667889998876654
No 373
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=71.27 E-value=48 Score=30.54 Aligned_cols=100 Identities=13% Similarity=0.000 Sum_probs=61.5
Q ss_pred HHHHHHHh-c--CCeEEEeCCCC------CCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CC-CCCCCCchhHHHHHh-c
Q 022892 121 DLLVAAAK-T--GKIINIKKGQF------CASSVMVNSAEKVRLAGNPNVMVCERGTMF-GY-NDLIVDPRNLEWMRE-A 188 (290)
Q Consensus 121 ~lL~~~a~-~--~~PVilstG~~------~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~-~y-~~~~~dL~~i~~lk~-~ 188 (290)
++++++-+ . +.||.++-... .+++|....++.+... -.-|.+.+.+... +. .....++..+..+|+ +
T Consensus 198 eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (343)
T 3kru_A 198 EVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC 276 (343)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc
Confidence 34455433 3 57999987652 2688888888887765 4444443333211 00 011245667777888 8
Q ss_pred CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 189 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 189 ~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
++||+....-. . +..+..+++.| ||++++=+.+
T Consensus 277 ~iPVi~~Ggi~-----------------t-----~e~Ae~~l~~G~aD~V~iGR~~ 310 (343)
T 3kru_A 277 NIKTSAVGLIT-----------------T-----QELAEEILSNERADLVALGREL 310 (343)
T ss_dssp TCEEEEESSCC-----------------C-----HHHHHHHHHTTSCSEEEESHHH
T ss_pred Ccccceeeeee-----------------H-----HHHHHHHHhchhhHHHHHHHHH
Confidence 99998743322 1 56677788888 9988887665
No 374
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=71.01 E-value=8.8 Score=38.29 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=31.2
Q ss_pred cCCH-HHHHHHHhcCCeEEEeCCCC---------CCHHHHHHHHHHHHHcC-CCcEEEEee
Q 022892 117 CRQT-DLLVAAAKTGKIINIKKGQF---------CASSVMVNSAEKVRLAG-NPNVMVCER 166 (290)
Q Consensus 117 ~~n~-~lL~~~a~~~~PVilstG~~---------~tl~e~~~Ave~i~~~G-n~~i~L~~~ 166 (290)
+++. ++++.+.+.+.||++|--.. -+.+|+..+++.+.+.. +.. ++++.
T Consensus 230 v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~~~~~-vlVEe 289 (587)
T 3jrx_A 230 VKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSP-IFLMK 289 (587)
T ss_dssp CCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHSTTCC-EEEEE
T ss_pred cCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhccCCC-EEEEE
Confidence 4444 34555677899999995332 16788888888776542 334 44444
No 375
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=70.76 E-value=9.9 Score=35.64 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=57.2
Q ss_pred HHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceecccCCc-------cCCHHHHHHHHh-cCCeEEEeCCCCCCHHH
Q 022892 76 LKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIPAFL-------CRQTDLLVAAAK-TGKIINIKKGQFCASSV 145 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs~~-------~~n~~lL~~~a~-~~~PVilstG~~~tl~e 145 (290)
++.++++++..++|++. .+..++.+..+.+ .+|.+.|+..- ..+.+++.++.+ .+.||+.+-|.. +.++
T Consensus 214 ~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~-~~~d 292 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFR-RGSD 292 (380)
T ss_dssp HHHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCC-SHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCC-CHHH
Confidence 66788888999999985 6788888888877 69999994421 123556666543 577999999999 9999
Q ss_pred HHHHHH
Q 022892 146 MVNSAE 151 (290)
Q Consensus 146 ~~~Ave 151 (290)
+..++.
T Consensus 293 v~kal~ 298 (380)
T 1p4c_A 293 IVKALA 298 (380)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 376
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=70.66 E-value=16 Score=30.59 Aligned_cols=69 Identities=7% Similarity=0.017 Sum_probs=46.9
Q ss_pred HHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhc-C--CeEEEeCCCCCCHHHHHHH
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKT-G--KIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~-~--~PVilstG~~~tl~e~~~A 149 (290)
+.+.++++|.+++..+.++.++....+ .+|++++-.......+.++++.+. + .||+..-|.. .+++...
T Consensus 93 ~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~~~ipvia~GGI~--~~~i~~~ 165 (212)
T 2v82_A 93 VIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVT--PENLAQW 165 (212)
T ss_dssp HHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSCTTCEEEEESSCC--TTTHHHH
T ss_pred HHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhccCCCeEEEeCCCC--HHHHHHH
Confidence 346778899998888888887766555 699988722122345777777653 3 8998888875 5555543
No 377
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=70.58 E-value=10 Score=34.61 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCCCchhHHHHHh---cCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 141 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 141 ~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~----~~~dL~~i~~lk~---~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
.+.+++..-++...+.|.+=|=+.=..+.++.+. +++. +.++.++. .++||.+|+.+
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~-Rv~pvi~~l~~~~vpiSIDT~~--------------- 106 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELA-RVIPLVEALRPLNVPLSIDTYK--------------- 106 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHH-HHHHHHHHHGGGCSCEEEECCC---------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHhhCCCeEEEECCC---------------
Confidence 3567777766777778864333322222333322 1222 44555554 38999999876
Q ss_pred cCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 214 ASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 214 ~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
+.++.+|+..||+ +|-
T Consensus 107 ---------~~Va~aAl~aGa~--iIN 122 (294)
T 2y5s_A 107 ---------PAVMRAALAAGAD--LIN 122 (294)
T ss_dssp ---------HHHHHHHHHHTCS--EEE
T ss_pred ---------HHHHHHHHHcCCC--EEE
Confidence 4677788878887 554
No 378
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=70.56 E-value=38 Score=28.96 Aligned_cols=21 Identities=14% Similarity=-0.013 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHcCCCcEEEEe
Q 022892 145 VMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
-...|++++.+.|..+|.++.
T Consensus 115 ~g~~a~~~L~~~G~~~I~~i~ 135 (290)
T 2rgy_A 115 GGELAAATLIEHGHRKLAVIS 135 (290)
T ss_dssp HHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHHCCCceEEEEe
Confidence 344556666666666665553
No 379
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=70.40 E-value=12 Score=32.12 Aligned_cols=89 Identities=17% Similarity=0.152 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
..+.++++.+ +|++.+...... |+ ..+.+++ +..++++++..++|+++ -+.+++++..+.+ .++
T Consensus 154 ~~e~~~~~~~----~G~~~i~~~~~~---~~--g~~~g~~----~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gad 220 (252)
T 1ka9_F 154 AVEWAVKGVE----LGAGEILLTSMD---RD--GTKEGYD----LRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAE 220 (252)
T ss_dssp HHHHHHHHHH----HTCCEEEEEETT---TT--TTCSCCC----HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----cCCCEEEEeccc---CC--CCcCCCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCH
Confidence 4666666665 598876654222 22 2233332 66677777778999998 4577778877776 699
Q ss_pred eecccCCccCCH----HHHHHHHhcCCeE
Q 022892 109 IIQIPAFLCRQT----DLLVAAAKTGKII 133 (290)
Q Consensus 109 ~~kIgs~~~~n~----~lL~~~a~~~~PV 133 (290)
.+-||+..+.+. .+++.+.+.+.||
T Consensus 221 gv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 221 AALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp EEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 999999877553 3445556667665
No 380
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=70.30 E-value=9.4 Score=36.60 Aligned_cols=98 Identities=15% Similarity=0.201 Sum_probs=61.8
Q ss_pred CC-eEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCc-------ccCCCCCh-hHHHHHHHHHHHh
Q 022892 15 EP-FFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSS-------KSFRGPGM-VEGLKILEKVKIA 85 (290)
Q Consensus 15 ~~-~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~-------~~~~g~~~-~~~l~~L~~~~~~ 85 (290)
.| ++|=--|+. +.+...++|+.+.+ +|+|+|....-.. .|... ..+.|..+ ...+++++++.+.
T Consensus 269 ~P~V~VKi~pd~--~~~~i~~iA~~a~~----aGaDgIiv~Ntt~-~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~ 341 (415)
T 3i65_A 269 KPLVFVKLAPDL--NQEQKKEIADVLLE----TNIDGMIISNTTT-QINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 341 (415)
T ss_dssp CCEEEEEECSCC--CHHHHHHHHHHHHH----HTCSEEEECCCBS-CCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCC--CHHHHHHHHHHHHH----cCCcEEEEeCCCc-ccccccccccccCCcCCccchHHHHHHHHHHHHH
Confidence 45 344446665 55567777777766 6999876542211 11111 11111111 2457788888888
Q ss_pred c--CCcEEE--eecCcccHHHHhh-hcceecccCCccCC
Q 022892 86 Y--DIPIVT--DVHETVQCEEVGK-VADIIQIPAFLCRQ 119 (290)
Q Consensus 86 ~--Gi~~~s--~~~d~~~~~~l~~-~~d~~kIgs~~~~n 119 (290)
. .||++. -+++.+++..+.. .+|.++||+..+.+
T Consensus 342 v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 342 TNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp TTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc
Confidence 8 589887 6888888776655 79999999987755
No 381
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=70.23 E-value=27 Score=29.24 Aligned_cols=22 Identities=5% Similarity=-0.016 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEEe
Q 022892 144 SVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 144 ~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
.-...+++++.+.|..+|.++.
T Consensus 106 ~~~~~a~~~L~~~G~~~i~~i~ 127 (272)
T 3o74_A 106 DASRQLAASLLSSAPRSIALIG 127 (272)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEEe
Confidence 3445556666666666665553
No 382
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=70.18 E-value=9.8 Score=36.36 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh---cc-eecccCCcc--CCHHHHHHHH--hcCCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV---AD-IIQIPAFLC--RQTDLLVAAA--KTGKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~---~d-~~kIgs~~~--~n~~lL~~~a--~~~~PVilstG~~~tl~ 144 (290)
.+.++.+++.+++++|.++=+|+++++.+-+..+ +. -++|.+.+. +|...++.+- +.---|.+|-...+++.
T Consensus 264 ~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiT 343 (417)
T 3qn3_A 264 EALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTIT 343 (417)
T ss_dssp HHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHH
T ss_pred HHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHH
Confidence 3456667777899999999999999988877653 21 245666655 4554444432 22335888888888888
Q ss_pred HHHHHHHHHHHcCCCcEEEEeec
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
|++.+++..++.|- .+++-||.
T Consensus 344 ea~kia~lA~~~G~-~v~vsh~s 365 (417)
T 3qn3_A 344 QTMRTVRLAQRNNY-KCVMSHRS 365 (417)
T ss_dssp HHHHHHHHHHHTTC-EEEEECCS
T ss_pred HHHHHHHHHHHcCC-eEEEeCCC
Confidence 88888888777653 56666664
No 383
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=70.16 E-value=8.4 Score=35.69 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHHH-HHHcCCCEEeccccccCCCCCcccCC--CCChhHHHHHHHHHHHhcCCcEEE--eecC------
Q 022892 28 SEEHIMRMAKHIKSI-STKVGLPLVFKSSFDKANRTSSKSFR--GPGMVEGLKILEKVKIAYDIPIVT--DVHE------ 96 (290)
Q Consensus 28 n~~~~le~Ak~L~~~-a~~~G~~~V~~~~~~k~~rts~~~~~--g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d------ 96 (290)
+++..+++|..|++. -+++|...|-....+-..|...+.+. .-.+..|++.|.++++++|+.|-- ++..
T Consensus 34 se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~rd~~G~~~~d~~rFP~G~k~ladyih~~Glk~Giy~~~~~~~c~g~ 113 (400)
T 4do4_A 34 SEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGY 113 (400)
T ss_dssp SHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEECTTCCEEECTTTSTTCHHHHHHHHHHTTCEEEEEEEBSSBCTTSC
T ss_pred cHHHHHHHHHHHHHCcchhhCCeEEEECCCcccCCCCCCCEeECcccCCcccHHHHHHHHHCCceEEEecCCCCcccCCC
Confidence 688899999998875 35678887766544433444332221 111236899999999999999875 2221
Q ss_pred --------cccHHHHhh-hcceecccCCccC-------CHHHHHHHHhcCCeEEEeCC
Q 022892 97 --------TVQCEEVGK-VADIIQIPAFLCR-------QTDLLVAAAKTGKIINIKKG 138 (290)
Q Consensus 97 --------~~~~~~l~~-~~d~~kIgs~~~~-------n~~lL~~~a~~~~PVilstG 138 (290)
...++..++ .+|++|+-..... ...+.+++.+++.|+.++..
T Consensus 114 ~~~~~~~~~~da~~~a~wGvdylK~D~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 171 (400)
T 4do4_A 114 PGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATGRPIAFSCS 171 (400)
T ss_dssp BCBCGGGHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHHHHHHHHHTCSCCEEEEC
T ss_pred CchhHhHHHHHHHHHHHhCCceEeeccCcCChhhhhhhhhHHHHHHHHhCccceeccc
Confidence 112344455 6999998654332 12344556788899888754
No 384
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=70.16 E-value=7 Score=35.98 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCCC--chhHHHHHh-cCCCEEEeCCC
Q 022892 141 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVD--PRNLEWMRE-ANCPVVADVTH 198 (290)
Q Consensus 141 ~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~----~~~d--L~~i~~lk~-~~~pV~~D~sH 198 (290)
.+++.+..-++...+.|.+=|=+.=..|.++.+. +++. +..|..+++ +++||-+|+.+
T Consensus 30 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~ 94 (314)
T 2vef_A 30 FALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWK 94 (314)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCC
Confidence 3566666666666777764333322222222211 2222 123333565 68888888776
No 385
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=70.04 E-value=10 Score=36.21 Aligned_cols=31 Identities=13% Similarity=-0.014 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCcEEEeecCcccHHHHhh
Q 022892 75 GLKILEKVKIAYDIPIVTDVHETVQCEEVGK 105 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~ 105 (290)
-++++.+.+++++|.++=+|+++++.+-+..
T Consensus 277 ~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~ 307 (432)
T 2ptz_A 277 LRETYCKWAHDYPIVSIEDPYDQDDFAGFAG 307 (432)
T ss_dssp HHHHHHHHHHHSCEEEEECCSCTTCHHHHHH
T ss_pred HHHHHHHHHHhCCceEEECCCCcchHHHHHH
Confidence 3455668889999999999999988776543
No 386
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=70.01 E-value=46 Score=30.77 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=24.1
Q ss_pred hHHhhhcCC-CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEec
Q 022892 6 ALFNQLKAA-EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFK 53 (290)
Q Consensus 6 ~~~~~i~~~-~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~ 53 (290)
.||+-+|-. +++-+-+-.+...+.+...+.|+++++ .|++.+|.
T Consensus 141 Pl~~llGg~~~~vp~~~~~g~~~~~e~~~~~a~~~~~----~Gf~~vKi 185 (388)
T 2nql_A 141 SIRDLLGGGVDSFPAYVSGLPERTLKARGELAKYWQD----RGFNAFKF 185 (388)
T ss_dssp BHHHHTTCCCSEEEEEEECCCCSSHHHHHHHHHHHHH----TTCCEEEE
T ss_pred cHHHHhCCCCCceEeeEEeCCCCCHHHHHHHHHHHHH----hCCCEEEE
Confidence 356656532 222233322212366667777777665 59999885
No 387
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=70.00 E-value=9.4 Score=35.27 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----C----CCCC--chhHHHHHh-cCCCEEEeCCCCCCCCCCCccC
Q 022892 141 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----D----LIVD--PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLD 209 (290)
Q Consensus 141 ~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~----~----~~~d--L~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~ 209 (290)
.+++++.+-++...+.|.+=|=+.=..+.++.. . +++. +..+..+++ +++||-+|+.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~----------- 114 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR----------- 114 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-----------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-----------
Confidence 478888888888888887533333222333332 1 1111 123445556 68999999776
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 210 GGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 210 ~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
+.++++|+.+||+
T Consensus 115 -------------~~Va~aAl~aGa~ 127 (314)
T 3tr9_A 115 -------------PRVMREAVNTGAD 127 (314)
T ss_dssp -------------HHHHHHHHHHTCC
T ss_pred -------------HHHHHHHHHcCCC
Confidence 4567777777776
No 388
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=69.85 E-value=6.6 Score=34.14 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEecc-ccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKS-SFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE 96 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~-~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d 96 (290)
..+..++..++.++.|+++|+..|... .+. |......|+. +.+.+..+.+++++.||.+.-|++.
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~--~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lE~~~ 161 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLHIGFV--PESSSPDYSE--LVRVTQDLLTHAANHGQAVHLETGQ 161 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEECCCCC--CCTTSHHHHH--HHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC--cccchHHHHH--HHHHHHHHHHHHHHcCCEEEEecCC
Confidence 356788999999999999999987652 222 1111111110 1366888889999999999999974
No 389
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=69.75 E-value=2.7 Score=36.56 Aligned_cols=67 Identities=7% Similarity=0.098 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCC-CCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKAN-RTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE 96 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~-rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d 96 (290)
..+..++..++.++.|+++|+..|..-.....+ ..+...|+. +.+.+..+.+++++.||.+.-+++.
T Consensus 78 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lE~~~ 145 (286)
T 3dx5_A 78 DFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQE--YVNRIRMICELFAQHNMYVLLETHP 145 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHH--HHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHH--HHHHHHHHHHHHHHhCCEEEEecCC
Confidence 467789999999999999999987543221100 011111110 1366788889999999999999863
No 390
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=69.70 E-value=92 Score=30.93 Aligned_cols=91 Identities=10% Similarity=0.012 Sum_probs=56.2
Q ss_pred CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCC-----CC-CCCCCCCchhHHHHHh-cCCCEEEeC
Q 022892 130 GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTM-----FG-YNDLIVDPRNLEWMRE-ANCPVVADV 196 (290)
Q Consensus 130 ~~PVilstG~------~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~-----~~-y~~~~~dL~~i~~lk~-~~~pV~~D~ 196 (290)
..||.++-+. ..+.+|....+..+.. | -+.+=++.|+. .+ |.....++..+..+|+ .++||+...
T Consensus 224 ~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~-~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G 301 (690)
T 3k30_A 224 RAAVACRITVEEEIDGGITREDIEGVLRELGE-L-PDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVG 301 (690)
T ss_dssp SSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-S-SSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECS
T ss_pred CceEEEEECccccCCCCCCHHHHHHHHHHHHh-h-cCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeC
Confidence 6799998632 2367888888877765 5 34555555531 01 1112233455566677 789998733
Q ss_pred CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeCC
Q 022892 197 THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 244 (290)
Q Consensus 197 sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~t 244 (290)
+-. . +..+..+++.| ||++++=+.+-
T Consensus 302 ~i~-----------------~-----~~~a~~~l~~g~~d~v~~gR~~~ 328 (690)
T 3k30_A 302 RFT-----------------S-----PDAMVRQIKAGILDLIGAARPSI 328 (690)
T ss_dssp CCC-----------------C-----HHHHHHHHHTTSCSEEEESHHHH
T ss_pred CCC-----------------C-----HHHHHHHHHCCCcceEEEcHHhH
Confidence 222 1 56677888887 99888887653
No 391
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=69.68 E-value=23 Score=32.81 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=57.9
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCC---EEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLP---LVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~---~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
++++.+=+-|-...|.++.++.|++|.++.++.|++ ++.+- |-| ++|++..+++. +.||.+
T Consensus 98 ~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKI-----P~T----------~eGl~A~~~L~-~~GI~~ 161 (329)
T 3m16_A 98 PGVISTEVDARLSFDTQATVAKARKLIRLYQDAGIDSDRILIKI-----AST----------WEGIQAAKILE-AEGIHC 161 (329)
T ss_dssp SSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECS----------HHHHHHHHHHH-HTTCCE
T ss_pred CCcEEEEECCcccCCHHHHHHHHHHHHHhhhhhCCCCCcEEEEe-----CCC----------HHHHHHHHHHH-HCCCcE
Confidence 455554444443469999999999999999988875 33332 211 57888888775 569999
Q ss_pred -EEeecCcccHHHHhh-hccee
Q 022892 91 -VTDVHETVQCEEVGK-VADII 110 (290)
Q Consensus 91 -~s~~~d~~~~~~l~~-~~d~~ 110 (290)
+|-+|+..+.-...+ ++.++
T Consensus 162 N~TliFS~~Qa~aaA~AGa~~I 183 (329)
T 3m16_A 162 NLTLLFHFAQAQACAEAGTTLI 183 (329)
T ss_dssp EEEEECSHHHHHHHHHTTCSEE
T ss_pred EEEEeCCHHHHHHHHHcCCcEE
Confidence 778999998887776 55544
No 392
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=69.57 E-value=2.7 Score=36.88 Aligned_cols=65 Identities=11% Similarity=0.263 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCC-CCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANR-TSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE 96 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~r-ts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d 96 (290)
+..++..++.++.|+++|+..|....+..... .....++ .+.+.+.++.+++++.||.+.-|++.
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~a~~~Gv~l~lEn~~ 169 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRR--RFRDGLKESVEMASRAQVTLAMEIMD 169 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHH--HHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHH--HHHHHHHHHHHHHHHhCCEEEEeeCC
Confidence 45789999999999999999887644331000 0000011 01356778888999999999999985
No 393
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=69.47 E-value=12 Score=32.85 Aligned_cols=81 Identities=12% Similarity=0.199 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-CCcEEEe--ecCcccHHHHhhhccee
Q 022892 34 RMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-DIPIVTD--VHETVQCEEVGKVADII 110 (290)
Q Consensus 34 e~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-Gi~~~s~--~~d~~~~~~l~~~~d~~ 110 (290)
+.+......++-.|.++|...+ .. .+ + ..+.++++++.. ++|++.. +.+++++..+...+|.+
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~-sG--~~--------~---~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~~gAD~V 205 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEY-SG--VL--------G---DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVI 205 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-TT--SC--------C---CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEecC-CC--Cc--------C---CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhCCCEE
Confidence 4455555666678999997765 31 11 1 256677777777 7998884 78899998887789999
Q ss_pred cccCCccCCHHHHHHHHh
Q 022892 111 QIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 111 kIgs~~~~n~~lL~~~a~ 128 (290)
-|||.-.+|.+++++..+
T Consensus 206 VVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 206 VVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp EECTHHHHCHHHHHHHHH
T ss_pred EEChHHhcCHHHHHHHHH
Confidence 999999999998877643
No 394
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=69.35 E-value=34 Score=28.99 Aligned_cols=60 Identities=7% Similarity=-0.079 Sum_probs=38.0
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC-----------CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-----------ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~-----------tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
.+|.+-+.+.+... +.++.+.+.+.||++=..... +..-...|++++.+.|..+|.++..
T Consensus 69 ~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~ 139 (292)
T 3k4h_A 69 QIGGIILLYSREND-RIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGG 139 (292)
T ss_dssp CCCEEEESCCBTTC-HHHHHHHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCCEEEEeCCCCCh-HHHHHHHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEeC
Confidence 46665555444444 566777778888776443221 2245667788888888888887753
No 395
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=69.16 E-value=36 Score=29.87 Aligned_cols=93 Identities=10% Similarity=0.004 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcc------cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC-----
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETV------QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----- 141 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~------~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----- 141 (290)
.-+.-+.+.+++.|..++....+.. .++.+.+ .+|-+-+.+......++.+.+...+.||++=.....
T Consensus 80 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 159 (338)
T 3dbi_A 80 ELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSH 159 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSSSGGG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCCCCCCCC
Confidence 4466688899999998776543322 2233333 588887776666655676777778899776443211
Q ss_pred -----CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 142 -----ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 142 -----tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
+..-...|++++.+.|..+|.++..
T Consensus 160 ~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 189 (338)
T 3dbi_A 160 SVWCDHKQTSFNAVAELINAGHQEIAFLTG 189 (338)
T ss_dssp EECBCHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred EEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 3355677888999999999888753
No 396
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=69.04 E-value=13 Score=33.78 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=0.0
Q ss_pred ecccCCccCCHH----HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHH
Q 022892 110 IQIPAFLCRQTD----LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM 185 (290)
Q Consensus 110 ~kIgs~~~~n~~----lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~l 185 (290)
|.||++++.|.+ .++++...+.||||..... ...-+ ..+.+. ..+..+
T Consensus 18 yAv~AfNv~n~e~~~avl~AAe~~~sPvIlq~s~~-~~~y~--g~~~~~-------------------------~~v~~~ 69 (286)
T 1gvf_A 18 YAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPG-TFKHI--ALEEIY-------------------------ALCSAY 69 (286)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHTCCCEEEECTT-HHHHS--CHHHHH-------------------------HHHHHH
T ss_pred CEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChh-HHhhc--CHHHHH-------------------------HHHHHH
Q ss_pred Hh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEe-eeCCCCCCCCCCCCCCChHHHHH
Q 022892 186 RE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME-VHDDPLNAPVDGPTQWPLRNLEE 263 (290)
Q Consensus 186 k~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE-kH~t~dka~~D~~~sl~p~~l~~ 263 (290)
.+ +++||.+--||+. . ......|+.+|...+||- +|. .|++
T Consensus 70 a~~~~VPValHlDHg~----------------~-----~e~i~~ai~~GFtSVMiDgS~l----------------p~ee 112 (286)
T 1gvf_A 70 STTYNMPLALHLDHHE----------------S-----LDDIRRKVHAGVRSAMIDGSHF----------------PFAE 112 (286)
T ss_dssp HHHTTSCBEEEEEEEC----------------C-----HHHHHHHHHTTCCEEEECCTTS----------------CHHH
T ss_pred HHhCCCcEEEEcCCCC----------------C-----HHHHHHHHHcCCCeEEECCCCC----------------CHHH
Q ss_pred HHHHHHHHHHH
Q 022892 264 LLEELVAIAKV 274 (290)
Q Consensus 264 lv~~ir~~~~~ 274 (290)
=++..+++-+.
T Consensus 113 Ni~~Tk~vv~~ 123 (286)
T 1gvf_A 113 NVKLVKSVVDF 123 (286)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
No 397
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=68.88 E-value=14 Score=35.70 Aligned_cols=168 Identities=15% Similarity=0.075 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHh---cCCcEEEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 022892 74 EGLKILEKVKIA---YDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 74 ~~l~~L~~~~~~---~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~A 149 (290)
.+-+.|+++.++ -+...+-.+||+-++..+.+ ..+.+.+++..+.... -.+..|.| --|.. +.+|+.+.
T Consensus 49 ~~a~~Lr~ll~~~~~~~~~~~~Ga~d~~sA~~~~~aGf~Aiy~SG~~vAa~~---~~s~~G~P---D~gl~-~~~ev~~~ 121 (435)
T 3lg3_A 49 NGAKKLWELLHGGSRKGYINCLGALTGGQALQQAKAGVEAIYMSGWQVAADA---NTASSMYP---DQSLY-PVDSVPAV 121 (435)
T ss_dssp HHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHHHHHHTCCSEEECHHHHHHHC---CTTCSCCC---SSSCS-CTTHHHHH
T ss_pred HHHHHHHHHHHhhccCCcEEeCCCCcHHHHHHHHHcCCCEEEechHHHhccc---chhccCCC---CcCcC-cHHHHHHH
Confidence 456778888877 67777889999999999888 6898888887654310 01244555 22333 77777777
Q ss_pred HHHHHHcC--CCcEEEEeec--CCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 022892 150 AEKVRLAG--NPNVMVCERG--TMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 225 (290)
Q Consensus 150 ve~i~~~G--n~~i~L~~~g--s~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~ 225 (290)
++.|...- .+++...++. +..+| +| +.+||++|.+.+- |...-+...
T Consensus 122 v~rI~~a~~~~d~~~~~~~~~~~~~~~----~d---------~~lPviaD~DtGy----------------G~~~~v~~t 172 (435)
T 3lg3_A 122 VKRINNSFRRADQIQWSNNIEPGSKGY----TD---------YFLPIVADAEAGF----------------GGVLNAFEL 172 (435)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTSTTC----CC---------CCCCEEEECTTCS----------------SSHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhcccccccccc----cc---------CCCCeEEECCCCC----------------CCcHHHHHH
Confidence 76554210 0011111100 00011 11 3489999999874 322223445
Q ss_pred HHHHHHcCCCEEEEeeeCC-CCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 022892 226 ARTAIAVGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 277 (290)
Q Consensus 226 a~aAva~GA~G~~IEkH~t-~dka~-~D~~~sl~p~~l~~lv~~ir~~~~~lg~ 277 (290)
.+..+.+||.|+.||-... |.|-- .+++.-.+.+++-.-++..+.....+|.
T Consensus 173 v~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~ 226 (435)
T 3lg3_A 173 MKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGV 226 (435)
T ss_dssp HHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 5666889999999997653 33311 1333445555554444444444444454
No 398
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=68.74 E-value=21 Score=33.93 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK 105 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~ 105 (290)
.+.++.++++.++++|.++=+|+.+++.+-+..
T Consensus 270 ~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~ 302 (431)
T 2fym_A 270 EEFTHFLEELTKQYPIVSIEDGLDESDWDGFAY 302 (431)
T ss_dssp HHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEEECCCCcccHHHHHH
Confidence 455667777777799999999999988776543
No 399
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=68.64 E-value=16 Score=37.03 Aligned_cols=103 Identities=11% Similarity=-0.027 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC---cc----cHHHH
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE---TV----QCEEV 103 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d---~~----~~~~l 103 (290)
...+..|+.|+.|++.|.+.|-...-|.. .....|....-..++++|.+|+++.||.++-=... .. ..+.+
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~--~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~ 383 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAV--NLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHY 383 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBC--TTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccc--CCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHH
Confidence 36889999999999999998877655521 11111211100256999999999999998862221 12 34445
Q ss_pred hh-hcceecccCCccCCH-------HHHHHHHhcCCeEEE
Q 022892 104 GK-VADIIQIPAFLCRQT-------DLLVAAAKTGKIINI 135 (290)
Q Consensus 104 ~~-~~d~~kIgs~~~~n~-------~lL~~~a~~~~PVil 135 (290)
.+ .++-+||+=.+-... .+++.+|+.+.-|.+
T Consensus 384 ~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 384 AEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 55 588888876654222 344555565555444
No 400
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=68.51 E-value=14 Score=32.58 Aligned_cols=129 Identities=14% Similarity=0.107 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCCh-hH--HHHHHHHHHHhcCCcEEEeecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGM-VE--GLKILEKVKIAYDIPIVTDVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~-~~--~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~ 104 (290)
+....++.|++|++++.+.|+..+.-..++-+-...- .|.-+ .. ....+++. ...+..+-.++++++++....
T Consensus 77 ~~~~~~~~a~~l~~l~~~~~~~liInd~~~lA~~~gA---dGVHLg~~dl~~~~~r~~-~~~~~~iG~S~ht~~Ea~~A~ 152 (243)
T 3o63_A 77 QARDELAACEILADAAHRYGALFAVNDRADIARAAGA---DVLHLGQRDLPVNVARQI-LAPDTLIGRSTHDPDQVAAAA 152 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTC---SEEEECTTSSCHHHHHHH-SCTTCEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhCCEEEEeCHHHHHHHhCC---CEEEecCCcCCHHHHHHh-hCCCCEEEEeCCCHHHHHHHh
Confidence 4677899999999999999988776554431111000 11100 11 12333333 224667778899998888766
Q ss_pred h-hcceecccCCcc---------CCHHHHHHHHhc---CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 105 K-VADIIQIPAFLC---------RQTDLLVAAAKT---GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 105 ~-~~d~~kIgs~~~---------~n~~lL~~~a~~---~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
+ .+|++.+|..-- ...++++++... +.||+--=|. +.+++... ...|-.-+++...
T Consensus 153 ~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI--~~~ni~~~----~~aGa~gvav~sa 221 (243)
T 3o63_A 153 AGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI--NAQRLPAV----LDAGARRIVVVRA 221 (243)
T ss_dssp HSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC--CTTTHHHH----HHTTCCCEEESHH
T ss_pred hCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC--CHHHHHHH----HHcCCCEEEEeHH
Confidence 5 799999987321 245677887764 7898888776 45555443 4467666665443
No 401
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=68.09 E-value=14 Score=34.44 Aligned_cols=64 Identities=8% Similarity=-0.093 Sum_probs=42.3
Q ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC---CCCCc----hhHHHHHh-cCCCEEE
Q 022892 129 TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND---LIVDP----RNLEWMRE-ANCPVVA 194 (290)
Q Consensus 129 ~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~---~~~dL----~~i~~lk~-~~~pV~~ 194 (290)
.++||+++-+-. +++||..+++.+...|-...+-+.+++ ++.+. ..-|. ..+..+++ .++||.+
T Consensus 127 ~~~pvivsI~g~-~~~d~~~~a~~l~~~g~~d~ielNisC-Pn~~G~~~l~~~~e~l~~il~av~~~~~~PV~v 198 (345)
T 3oix_A 127 DSKNHFLSLVGM-SPEETHTILXMVEASKYQGLVELNLSC-PNVPGXPQIAYDFETTDQILSEVFTYFTKPLGI 198 (345)
T ss_dssp TCCCCEEEECCS-SHHHHHHHHHHHHHSSCCSEEEEECSC-CCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEE
T ss_pred CCCCEEEEecCC-CHHHHHHHHHHHhccCCCcEEEEecCC-CCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEE
Confidence 578999998877 999999999999877766566666665 11111 10121 22334455 5789876
No 402
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=67.72 E-value=37 Score=29.16 Aligned_cols=90 Identities=7% Similarity=-0.089 Sum_probs=50.2
Q ss_pred HHHHHHHHHhcCCcEEEeecCc--c---cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC--------
Q 022892 76 LKILEKVKIAYDIPIVTDVHET--V---QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-------- 141 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~--~---~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~-------- 141 (290)
+.-+.+.+++.|..++....+. . .++.+.+ .+|-+-+.+..... +.++.+.+.+.||++=.....
T Consensus 29 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~V~ 107 (294)
T 3qk7_A 29 ISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRSHLPKPYAWFD 107 (294)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCCCCSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCCCCCCCCCEEE
Confidence 4445555566665554433221 1 1222333 46666665555444 566777777888765432110
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 142 --ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 142 --tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
+.+-...|++++.+.|..+|.++..
T Consensus 108 ~D~~~~~~~a~~~L~~~G~~~I~~i~~ 134 (294)
T 3qk7_A 108 FDNHAGASLAVKRLLELGHQRIAFVST 134 (294)
T ss_dssp ECHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cChHHHHHHHHHHHHHCCCceEEEEeC
Confidence 3355667788888888888877753
No 403
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=67.61 E-value=4.8 Score=34.29 Aligned_cols=67 Identities=4% Similarity=-0.077 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCC--CCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANR--TSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~r--ts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
..+..++..++.++.|+++|+..|..-.... +. +....|+ .+.+.+.++.+++++.|+.+.-|++++
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~-~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~l~~E~~~~ 147 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVMAGVV-PAGEDAERYRA--VFIDNIRYAADRFAPHGKRILVEALSP 147 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCCCBC-CTTSCHHHHHH--HHHHHHHHHHHHHGGGTCEEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECcCCC-CCCCCHHHHHH--HHHHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 3567899999999999999999876532110 10 0000011 013567788899999999999999865
No 404
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=67.54 E-value=12 Score=33.77 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecC---CCCCCC----CCCCchhHHHHHh---cCCCEEEeCCCCCCCCCCCccC
Q 022892 140 FCASSVMVNSAEKVRLAGNPNVMVCERGT---MFGYND----LIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLD 209 (290)
Q Consensus 140 ~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs---~~~y~~----~~~dL~~i~~lk~---~~~pV~~D~sHs~~~~~~~~~~ 209 (290)
..+.+....-++.+.+.|.+ ++.=|. .++... ++++ +.+|.++. .++||-+|..+
T Consensus 26 ~~~~~~a~~~a~~m~~~GAd---iIDIGgeSTRPga~~vs~eeE~~-Rv~pvi~~l~~~~v~iSIDT~~----------- 90 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGAD---IIDVGGVSTRPGHEMVTLEEELN-RVLPVVEAIVGFDVKISVDTFR----------- 90 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCS---EEEEESCCCSTTCCCCCHHHHHH-HHHHHHHHHTTSSSEEEEECSC-----------
T ss_pred CCCHHHHHHHHHHHHHCCCC---EEEECCccCCCCCCCCchHHHHH-HHHHHHHHhhcCCCeEEEECCC-----------
Confidence 34566666666677778875 344443 333332 1223 45555544 57888888765
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 210 GGGVASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 210 ~~~~~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
+.++++|+.+||+ +|-
T Consensus 91 -------------~~Va~~al~aGa~--iIN 106 (270)
T 4hb7_A 91 -------------SEVAEACLKLGVD--MIN 106 (270)
T ss_dssp -------------HHHHHHHHHHTCC--EEE
T ss_pred -------------HHHHHHHHHhccc--eec
Confidence 5678888888887 666
No 405
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=67.13 E-value=15 Score=35.11 Aligned_cols=84 Identities=13% Similarity=0.093 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh---cc-eecc-cCC-ccCCHHHHHHHHhc--CCeEEEeCCCCCCHH
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV---AD-IIQI-PAF-LCRQTDLLVAAAKT--GKIINIKKGQFCASS 144 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~---~d-~~kI-gs~-~~~n~~lL~~~a~~--~~PVilstG~~~tl~ 144 (290)
.+.++.+++.+++++|.++=+|+++++.+-+..+ +. -++| |-. .++|..-++.+-.. ---|.+|-...+++.
T Consensus 266 ~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiT 345 (428)
T 3tqp_A 266 EEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLT 345 (428)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHH
T ss_pred HHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHH
Confidence 4556667777899999999999999887765442 11 1222 222 12344333333211 123455555555555
Q ss_pred HHHHHHHHHHHc
Q 022892 145 VMVNSAEKVRLA 156 (290)
Q Consensus 145 e~~~Ave~i~~~ 156 (290)
|++.+++..+..
T Consensus 346 ealkia~lA~~~ 357 (428)
T 3tqp_A 346 ETLATVGLAKSN 357 (428)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 555555544443
No 406
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=67.12 E-value=13 Score=33.94 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCCCchhH---HHHHh-cCCCEEEeCCCCCCCCCCCccCCCCc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNL---EWMRE-ANCPVVADVTHSLQQPAGKKLDGGGV 213 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~----~~~dL~~i---~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~ 213 (290)
+.+++..-++...+.|-+=|=+.-..+.++++. +++. +.+ ..+++ +++||.+|+.+
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~-RvvpvI~~l~~~~~vpiSIDT~~--------------- 124 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIK-RVVPMIQAVSKEVKLPISIDTYK--------------- 124 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHH-HHHHHHHHHHHHSCSCEEEECSC---------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHHhcCCceEEEeCCC---------------
Confidence 345555555566677765444433333333322 1222 233 34455 68999998765
Q ss_pred cCCCCcccHHHHHHHHHHcCCCEEEEe
Q 022892 214 ASGGLRELIPCIARTAIAVGVDGVFME 240 (290)
Q Consensus 214 ~~~g~~~~~~~~a~aAva~GA~G~~IE 240 (290)
+.++.+|+.+|++ +|.
T Consensus 125 ---------~~V~~aAl~aGa~--iIN 140 (297)
T 1tx2_A 125 ---------AEVAKQAIEAGAH--IIN 140 (297)
T ss_dssp ---------HHHHHHHHHHTCC--EEE
T ss_pred ---------HHHHHHHHHcCCC--EEE
Confidence 4667777777887 664
No 407
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=67.11 E-value=19 Score=32.20 Aligned_cols=75 Identities=9% Similarity=-0.026 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhcCCcEE--EeecC-cccHHHHhhhcc-eecc-------cCCcc---CCHHHHHHHHh-cCCeEEEeCCC
Q 022892 75 GLKILEKVKIAYDIPIV--TDVHE-TVQCEEVGKVAD-IIQI-------PAFLC---RQTDLLVAAAK-TGKIINIKKGQ 139 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~--s~~~d-~~~~~~l~~~~d-~~kI-------gs~~~---~n~~lL~~~a~-~~~PVilstG~ 139 (290)
....+.+.++++|+..+ ..|-. .+.+..+.+..+ ++.. |++.- .-.++++.+.+ ++.||++--|.
T Consensus 136 e~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI 215 (267)
T 3vnd_A 136 ESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGI 215 (267)
T ss_dssp GCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSC
T ss_pred hHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCc
Confidence 35567777788887643 23322 244444444332 3333 22210 11245555543 45677777777
Q ss_pred CCCHHHHHHHH
Q 022892 140 FCASSVMVNSA 150 (290)
Q Consensus 140 ~~tl~e~~~Av 150 (290)
+ |.+++..++
T Consensus 216 ~-~~e~~~~~~ 225 (267)
T 3vnd_A 216 A-EPEQVRAAI 225 (267)
T ss_dssp C-SHHHHHHHH
T ss_pred C-CHHHHHHHH
Confidence 7 777766443
No 408
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=67.04 E-value=34 Score=29.58 Aligned_cols=42 Identities=10% Similarity=0.056 Sum_probs=27.0
Q ss_pred HHHHhcCCeEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 124 VAAAKTGKIINIKKGQF---CASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 124 ~~~a~~~~PVilstG~~---~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
+.+.+.|..+.+.+-.. .|++++... +...+.+++-+|....
T Consensus 154 ~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l---~~~v~~~~vg~~~D~~ 198 (295)
T 3cqj_A 154 EMASRAQVTLAMEIMDYPLMNSISKALGY---AHYLNNPWFQLYPDIG 198 (295)
T ss_dssp HHHHHHTCEEEEECCSSGGGCSHHHHHHH---HHHHCCTTEEEECBHH
T ss_pred HHHHHhCCEEEEeeCCCcccCCHHHHHHH---HHhcCCCCeEEEeccc
Confidence 33455688999988653 255655544 4444667888887765
No 409
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=67.02 E-value=61 Score=27.84 Aligned_cols=92 Identities=9% Similarity=-0.010 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcc------cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC-----
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETV------QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----- 141 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~------~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----- 141 (290)
.-+.-+.+.+++.|..++....+.. .++.+.+ .+|-+-+.+.+....+.++.+.+ +.||++=.....
T Consensus 32 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~~~~~~~ 110 (303)
T 3kke_A 32 DMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRVPGRVGS 110 (303)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCCTTCCCE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcCCCCCCE
Confidence 4566677888888887766444332 2233333 58877777666665326677777 999887543221
Q ss_pred ----CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 142 ----ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 142 ----tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
+.+-...|++++.+.|..+|.++..
T Consensus 111 V~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 139 (303)
T 3kke_A 111 VILDDQKGGGIATEHLITLGHSRIAFISG 139 (303)
T ss_dssp EEECHHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred EEECcHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 3455677888999999888887753
No 410
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=67.01 E-value=14 Score=34.70 Aligned_cols=130 Identities=6% Similarity=-0.017 Sum_probs=74.7
Q ss_pred eEEEEccCCccCHH-HHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe-e
Q 022892 17 FFLLAGPNVIESEE-HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD-V 94 (290)
Q Consensus 17 ~~iIAgpcsien~~-~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~-~ 94 (290)
..++|.++++.-.. ...+.+++.++.. ++|+..|-....++. .++.....+. ...++.++++++..++|++.- +
T Consensus 120 ~~~~anlg~~ql~~~~~~~~~~~av~~~-~a~al~Ihln~~~~~--~~p~g~~~~~-~~~~~~i~~i~~~~~vPVivK~v 195 (368)
T 3vkj_A 120 IPIIANLGMPQLVKGYGLKEFQDAIQMI-EADAIAVHLNPAQEV--FQPEGEPEYQ-IYALEKLRDISKELSVPIIVKES 195 (368)
T ss_dssp SCEEEEEEGGGGGTTCCHHHHHHHHHHT-TCSEEEEECCHHHHH--HSSSCCCBCB-THHHHHHHHHHTTCSSCEEEECS
T ss_pred cceecCcCeeecCCCCCHHHHHHHHHHh-cCCCeEEEecchhhh--hCCCCCchhh-HHHHHHHHHHHHHcCCCEEEEeC
Confidence 46888877642111 1245666666553 344444332221110 0111001010 146778888889999999985 5
Q ss_pred ---cCcccHHHHhh-hcceecccCCcc---------CC---------------------HHHHHHHHh-c-CCeEEEeCC
Q 022892 95 ---HETVQCEEVGK-VADIIQIPAFLC---------RQ---------------------TDLLVAAAK-T-GKIINIKKG 138 (290)
Q Consensus 95 ---~d~~~~~~l~~-~~d~~kIgs~~~---------~n---------------------~~lL~~~a~-~-~~PVilstG 138 (290)
++++.+..+.+ .+|++.|+..-= ++ ...|.++.. . +.||+.+-|
T Consensus 196 G~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GG 275 (368)
T 3vkj_A 196 GNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGG 275 (368)
T ss_dssp SSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESS
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECC
Confidence 67888888877 699998843211 11 122334432 3 479999999
Q ss_pred CCCCHHHHHHHHH
Q 022892 139 QFCASSVMVNSAE 151 (290)
Q Consensus 139 ~~~tl~e~~~Ave 151 (290)
.. +..++..|+.
T Consensus 276 I~-~~~d~~kal~ 287 (368)
T 3vkj_A 276 IR-SGLDAAKAIA 287 (368)
T ss_dssp CC-SHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 88 8888888765
No 411
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=67.01 E-value=32 Score=29.32 Aligned_cols=22 Identities=9% Similarity=-0.005 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEEe
Q 022892 144 SVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 144 ~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
.-...+++++.+.|..+|.++.
T Consensus 111 ~~g~~a~~~L~~~G~~~i~~i~ 132 (291)
T 3egc_A 111 RGARTAVEYLIARGHTRIGAIV 132 (291)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEe
Confidence 4455666677777776766654
No 412
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=66.92 E-value=17 Score=30.62 Aligned_cols=74 Identities=15% Similarity=0.053 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHH
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 223 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~ 223 (290)
+....++.+...|-.-+++......+ + ....++..+..+++ +++||++...-. . +
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~-~-~~~~~~~~i~~i~~~~~ipvi~~g~i~-----------------~-----~ 89 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP-E-GRATFIDSVKRVAEAVSIPVLVGGGVR-----------------S-----L 89 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT-T-THHHHHHHHHHHHHHCSSCEEEESSCC-----------------S-----H
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc-c-CCcccHHHHHHHHHhcCCCEEEECCCC-----------------C-----H
Confidence 44555666677787778876544321 1 11134556677777 789998732211 1 3
Q ss_pred HHHHHHHHcCCCEEEEeee
Q 022892 224 CIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 224 ~~a~aAva~GA~G~~IEkH 242 (290)
.-+..+..+||++++|-.-
T Consensus 90 ~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp HHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEChH
Confidence 3456677889998887643
No 413
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=66.84 E-value=32 Score=31.56 Aligned_cols=75 Identities=7% Similarity=0.003 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCcEEEee-------------------cCcccHHHH-hh-hcceecccCCcc-----------CCHHHH
Q 022892 76 LKILEKVKIAYDIPIVTDV-------------------HETVQCEEV-GK-VADIIQIPAFLC-----------RQTDLL 123 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~-------------------~d~~~~~~l-~~-~~d~~kIgs~~~-----------~n~~lL 123 (290)
-+++.++|++.|+.+=.|. .||+++..+ .+ .+|++.|+=++. -++++|
T Consensus 117 Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L 196 (307)
T 3n9r_A 117 TSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERL 196 (307)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHH
Confidence 3357788888888876542 456666554 44 699888765544 378899
Q ss_pred HHHHhc-CCeEEEeCCCCCCHHHHHHHHH
Q 022892 124 VAAAKT-GKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 124 ~~~a~~-~~PVilstG~~~tl~e~~~Ave 151 (290)
+++.+. +.|++|-=|.+ .+.|+...+.
T Consensus 197 ~~I~~~~~~PLVlHGgS~-vp~~~~~~~~ 224 (307)
T 3n9r_A 197 QEVKRLTNIPLVLHGASA-IPDNVRKSYL 224 (307)
T ss_dssp HHHHHHHCSCEEESSCCC-CCHHHHHHHH
T ss_pred HHHHhcCCCCeEEeCCCC-cchHHHHHHH
Confidence 998765 78988877776 7888877544
No 414
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=66.64 E-value=72 Score=28.55 Aligned_cols=108 Identities=15% Similarity=0.144 Sum_probs=64.9
Q ss_pred HHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc------------CCHHHH---HHHHh-cCC-eEEEeCC
Q 022892 77 KILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC------------RQTDLL---VAAAK-TGK-IINIKKG 138 (290)
Q Consensus 77 ~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~------------~n~~lL---~~~a~-~~~-PVilstG 138 (290)
..|++...+-...++-++||..++..+++ .+|++.+|+... +-.+++ +.+.+ .+. ||+.-++
T Consensus 7 ~~lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~p 86 (264)
T 1m3u_A 7 SLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLP 86 (264)
T ss_dssp HHHHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 44666666666778889999999999998 699999985421 223443 44443 443 6777777
Q ss_pred CCC--CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEE
Q 022892 139 QFC--ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVV 193 (290)
Q Consensus 139 ~~~--tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~ 193 (290)
... ++++....+..+...|- +-+=+|-+. + -...|..+.+.++||+
T Consensus 87 fgsy~~~~~a~~~a~rl~kaGa-~aVklEgg~------e--~~~~I~al~~agipV~ 134 (264)
T 1m3u_A 87 FMAYATPEQAFENAATVMRAGA-NMVKIEGGE------W--LVETVQMLTERAVPVC 134 (264)
T ss_dssp TTSSSSHHHHHHHHHHHHHTTC-SEEECCCSG------G--GHHHHHHHHHTTCCEE
T ss_pred CCCcCCHHHHHHHHHHHHHcCC-CEEEECCcH------H--HHHHHHHHHHCCCCeE
Confidence 631 45544433334444665 334445431 1 1235555555789985
No 415
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=66.08 E-value=60 Score=29.70 Aligned_cols=22 Identities=9% Similarity=0.122 Sum_probs=15.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEec
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFK 53 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~ 53 (290)
+.+...+.|+++++ .|++.+|.
T Consensus 148 ~~~~~~~~a~~~~~----~G~~~iKi 169 (375)
T 1r0m_A 148 DEQATVDLVRRHVE----QGYRRIKL 169 (375)
T ss_dssp SHHHHHHHHHHHHH----TTCSCEEE
T ss_pred CHHHHHHHHHHHHH----hcccEEEE
Confidence 56666677776665 59888875
No 416
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=65.92 E-value=14 Score=33.28 Aligned_cols=88 Identities=8% Similarity=-0.023 Sum_probs=50.5
Q ss_pred EEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHH-HHHHHHHHHhcCCcEEEe----
Q 022892 19 LLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEG-LKILEKVKIAYDIPIVTD---- 93 (290)
Q Consensus 19 iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~-l~~L~~~~~~~Gi~~~s~---- 93 (290)
||+|.++. |...+++.+ +.|+++|+|++.-. .|+.|+.+. +++ +...+++++..++|++-=
T Consensus 68 viaGvg~~-~t~~ai~la----~~A~~~Gadavlv~--------~P~y~~~~s-~~~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 68 IIFQVGGL-NLDDAIRLA----KLSKDFDIVGIASY--------APYYYPRMS-EKHLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp EEEECCCS-CHHHHHHHH----HHGGGSCCSEEEEE--------CCCSCSSCC-HHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred EEEecCCC-CHHHHHHHH----HHHHhcCCCEEEEc--------CCCCCCCCC-HHHHHHHHHHHHhhCCCCEEEEECch
Confidence 99999974 555555555 45566899987653 122122023 344 556778888899998841
Q ss_pred ----ecCcccHHHHhhhcceecccCCccCCHH
Q 022892 94 ----VHETVQCEEVGKVADIIQIPAFLCRQTD 121 (290)
Q Consensus 94 ----~~d~~~~~~l~~~~d~~kIgs~~~~n~~ 121 (290)
.++++.+.. .+.+-.+|-.+.++.++.
T Consensus 134 ~tg~~l~~~~~~~-~pnIvgiKds~gd~~~~~ 164 (293)
T 1w3i_A 134 ATGKDIDAKVAKE-IGCFTGVKDTIENIIHTL 164 (293)
T ss_dssp HHSCCCCHHHHHH-HCCEEEEEECCSCHHHHH
T ss_pred hhCcCCCHHHHHh-cCCEEEEEeCCCCHHHHH
Confidence 122222222 223556677776665443
No 417
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A
Probab=65.87 E-value=28 Score=32.18 Aligned_cols=124 Identities=15% Similarity=0.118 Sum_probs=73.4
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCC---E-EeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCc
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLP---L-VFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIP 89 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~---~-V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~ 89 (290)
++++.+=+-|...+|.++.++.|++|+++.++.|++ + ||-. = -++|++..+++..++||.
T Consensus 97 ~G~VS~EV~prla~d~e~~i~eA~~L~~l~~~~gi~r~nv~IKIP------a----------T~eGi~A~~~L~~e~GI~ 160 (331)
T 2e1d_A 97 PGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLS------S----------TWEGIQAGKELEEQHGIH 160 (331)
T ss_dssp SSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE------C----------SHHHHHHHHHHHHHHCCC
T ss_pred CCceEEEeccccCCCHHHHHHHHHHHHHHhHhhCCCCCcEEEEeC------C----------CHHHHHHHHHHHHhcCCc
Confidence 345444334434569999999999999999888864 2 2221 1 158999999887777999
Q ss_pred E-EEeecCcccHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 90 I-VTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 90 ~-~s~~~d~~~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
+ +|-+|+..++....+ .+.++.. |--+-.+..+. +.|.+=.=-.|- .-+..+..+.++++..|-
T Consensus 161 vNvTliFS~~Qa~aaa~AGa~~iSp--FVgRidd~~~~--~~g~~~~~~~~d-~gv~~v~~iy~~y~~~~~ 226 (331)
T 2e1d_A 161 CNMTLLFSFAQAVACAEAGVTLISP--FVGRILDWHVA--NTDKKSYEPQGD-PGVKSVTKIYNYYKKFGY 226 (331)
T ss_dssp EEEEEECSHHHHHHHHHHTCSEEEE--BSHHHHHHHHH--HSSCCCCCGGGC-HHHHHHHHHHHHHHHTTC
T ss_pred eeEeeeCCHHHHHHHHHcCCcEEEe--cccHHHHHHHh--hcCcccccccCC-HHHHHHHHHHHHHHHcCC
Confidence 9 556999999888776 4444322 11111111111 112100000111 136677778888877663
No 418
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=65.78 E-value=55 Score=31.56 Aligned_cols=103 Identities=13% Similarity=0.035 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-C-CcEE-EeecCcccHHHHhh-hc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-D-IPIV-TDVHETVQCEEVGK-VA 107 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-G-i~~~-s~~~d~~~~~~l~~-~~ 107 (290)
.++.++.|++ .|++++....-. +.. ...+..+..+.+.+ + ++++ -.+.+.+.+..+.+ .+
T Consensus 243 ~~e~~~~l~e----~gv~~l~Vd~~~-----------g~~-~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGa 306 (503)
T 1me8_A 243 FRERVPALVE----AGADVLCIDSSD-----------GFS-EWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGA 306 (503)
T ss_dssp HHHHHHHHHH----HTCSEEEECCSC-----------CCS-HHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTC
T ss_pred HHHHHHHHHh----hhccceEEeccc-----------Ccc-cchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCC
Confidence 4566777766 488876542110 111 22344454454444 5 7776 48999999999888 79
Q ss_pred ceecccCCc-------------cCCHHHHHHHHh----c------CCeEEEeCCCCCCHHHHHHHHH
Q 022892 108 DIIQIPAFL-------------CRQTDLLVAAAK----T------GKIINIKKGQFCASSVMVNSAE 151 (290)
Q Consensus 108 d~~kIgs~~-------------~~n~~lL~~~a~----~------~~PVilstG~~~tl~e~~~Ave 151 (290)
|++++|..- .-+...|.++++ . +.||+.+=|.. +..++..|+.
T Consensus 307 d~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~-~~~di~kAla 372 (503)
T 1me8_A 307 DFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIV-YDYHMTLALA 372 (503)
T ss_dssp SEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCC-SHHHHHHHHH
T ss_pred CeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC-CHHHHHHHHH
Confidence 999886522 122334444432 2 79999999999 9999998864
No 419
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=65.77 E-value=67 Score=29.41 Aligned_cols=128 Identities=9% Similarity=0.038 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccC--CCCCcccCCC-C--ChhHHHHHHHHHHHhcCCcEEE--ee-cCc--
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKA--NRTSSKSFRG-P--GMVEGLKILEKVKIAYDIPIVT--DV-HET-- 97 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~--~rts~~~~~g-~--~~~~~l~~L~~~~~~~Gi~~~s--~~-~d~-- 97 (290)
+.+...+.|+++++ +|+|.|-...=... .|+.. |-+ + ....-.+.++.+.+..++|+.. .+ ++.
T Consensus 68 ~p~~~~~aA~~a~~----~G~D~IeIn~gcP~~~~~~d~--~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~ 141 (350)
T 3b0p_A 68 DPKSLAEAARIGEA----FGYDEINLNLGCPSEKAQEGG--YGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKE 141 (350)
T ss_dssp CHHHHHHHHHHHHH----TTCSEEEEEECCCSHHHHHTT--CGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCcCCCCcCcCCC--cchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccc
Confidence 55666666666655 69998755431100 12211 110 0 0123344566666667999887 22 221
Q ss_pred ---cc---HHHHhh-hcceecccCCcc--------------CCHHHHHHHHh-c-CCeEEEeCCCCCCHHHHHHHHHHHH
Q 022892 98 ---VQ---CEEVGK-VADIIQIPAFLC--------------RQTDLLVAAAK-T-GKIINIKKGQFCASSVMVNSAEKVR 154 (290)
Q Consensus 98 ---~~---~~~l~~-~~d~~kIgs~~~--------------~n~~lL~~~a~-~-~~PVilstG~~~tl~e~~~Ave~i~ 154 (290)
.. +..+.+ .+|++.|-++.- .+.++++++.+ . +.||+..-|.. |.+++..+++
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~-s~eda~~~l~--- 217 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIR-SLEEALFHLK--- 217 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCC-SHHHHHHHHT---
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcC-CHHHHHHHHh---
Confidence 11 233444 599998887642 26778888765 4 78999999988 9999887653
Q ss_pred HcCCCcEEEEeecC
Q 022892 155 LAGNPNVMVCERGT 168 (290)
Q Consensus 155 ~~Gn~~i~L~~~gs 168 (290)
|. +.+.+=|+.
T Consensus 218 --Ga-D~V~iGRa~ 228 (350)
T 3b0p_A 218 --RV-DGVMLGRAV 228 (350)
T ss_dssp --TS-SEEEECHHH
T ss_pred --CC-CEEEECHHH
Confidence 53 455555543
No 420
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=65.77 E-value=1.3e+02 Score=34.57 Aligned_cols=113 Identities=10% Similarity=-0.045 Sum_probs=63.2
Q ss_pred hcce--ecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCc-EEEE----eecCCCCCCCCCCC
Q 022892 106 VADI--IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPN-VMVC----ERGTMFGYNDLIVD 178 (290)
Q Consensus 106 ~~d~--~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~-i~L~----~~gs~~~y~~~~~d 178 (290)
.+++ +-+|++.-.--...+.+..+|.+|+-.+.. +...++.+.. +...|-+- |++. +||.-.++ +++.
T Consensus 673 gv~i~~v~~~ag~p~~~~~~~~i~~lG~~vi~~~~~--~~~a~~~~~~-~~~~g~d~~ii~~~~G~eaGGH~g~--~d~~ 747 (2051)
T 2uv8_G 673 GYPIQFLTIGAGVPSLEVASEYIETLGLKYLGLKPG--SIDAISQVIN-IAKAHPNFPIALQWTGGRGGGHHSF--EDAH 747 (2051)
T ss_dssp TCSEEEEEEESSCCCHHHHHHHHHHSCCSCEEECCC--SHHHHHHHHH-HHHHSTTSCEEEEECCSSCSEECCS--CCSS
T ss_pred CCCcceEEecCCCCchhhHHHHHHHcCCEEEEecCc--hHHHHHHHHH-HHHhCCCceeEEEEEccCcCCCCCc--cccc
Confidence 5777 777777543223334556669988865553 4555555544 34456554 3444 44442222 2233
Q ss_pred chh---HHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH-----------HcCCCEEEEeeeC
Q 022892 179 PRN---LEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI-----------AVGVDGVFMEVHD 243 (290)
Q Consensus 179 L~~---i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAv-----------a~GA~G~~IEkH~ 243 (290)
... ++.+++ .++||+. +.- -+ .| .. ..+|. ++||+|+.+=+-|
T Consensus 748 ~~~l~l~~~v~~~~~ipvia-aGG--------------i~-dg-----~~-~~aaL~g~w~~~~g~~~lgadGv~~GTrf 805 (2051)
T 2uv8_G 748 TPMLQMYSKIRRHPNIMLIF-GSG--------------FG-SA-----DD-TYPYLTGEWSTKFDYPPMPFDGFLFGSRV 805 (2051)
T ss_dssp HHHHHHHHHHTTCTTBCCEE-ESS--------------CC-SH-----HH-HTHHHHTCGGGTTTCCCCCCSCEECSGGG
T ss_pred ccHHHHHHHHHhcCCceEEE-eCC--------------CC-CH-----HH-HHHHHccccccccCccCCCCceeeechHH
Confidence 333 466666 6899987 111 11 12 22 23556 8999999998887
Q ss_pred CC
Q 022892 244 DP 245 (290)
Q Consensus 244 t~ 245 (290)
-.
T Consensus 806 ~~ 807 (2051)
T 2uv8_G 806 MI 807 (2051)
T ss_dssp TT
T ss_pred Hh
Confidence 44
No 421
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=65.74 E-value=21 Score=32.75 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=23.9
Q ss_pred eecccCCccCCHHHHH----HHHhcCCeEEEeCCCC
Q 022892 109 IIQIPAFLCRQTDLLV----AAAKTGKIINIKKGQF 140 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~----~~a~~~~PVilstG~~ 140 (290)
=|.||++++.|.+.++ ++...+.||||.....
T Consensus 16 ~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g 51 (305)
T 1rvg_A 16 GYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEG 51 (305)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHH
T ss_pred CCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChh
Confidence 4678999999987654 4556788999977654
No 422
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=65.59 E-value=53 Score=27.67 Aligned_cols=59 Identities=10% Similarity=0.027 Sum_probs=33.6
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC----------CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----------ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----------tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
.+|.+-+.+.+. .+.++.+.+.+.||++=..... +.+-...|++++.+.|..+|.++-.
T Consensus 63 ~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 131 (276)
T 3jy6_A 63 GFDGLILQSFSN--PQTVQEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGYQHVVVLTS 131 (276)
T ss_dssp TCSEEEEESSCC--HHHHHHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred CCCEEEEecCCc--HHHHHHHHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHcCCCeEEEEec
Confidence 355555544443 4556666666777654322110 2345566777777777777766644
No 423
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=65.41 E-value=13 Score=33.05 Aligned_cols=57 Identities=16% Similarity=0.154 Sum_probs=47.6
Q ss_pred HHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 102 EVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 102 ~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
.+.+ .+|++-|....-.+.++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 64 ~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 64 VVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp HHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred HhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 3443 69999999998888899888889999999999998899998888887766653
No 424
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=65.39 E-value=44 Score=29.19 Aligned_cols=36 Identities=19% Similarity=0.070 Sum_probs=24.3
Q ss_pred ccCCccCHHHHHHHHHHHHHHH---HHcCCCEEeccccc
Q 022892 22 GPNVIESEEHIMRMAKHIKSIS---TKVGLPLVFKSSFD 57 (290)
Q Consensus 22 gpcsien~~~~le~Ak~L~~~a---~~~G~~~V~~~~~~ 57 (290)
||-+|+++...-..+..|.+.+ ++.|+|+|...++.
T Consensus 41 gp~~i~~~~d~~~a~~~l~~~~~~l~~~g~d~iviaCnt 79 (245)
T 3qvl_A 41 GVPSIEGHFDEAIAAVGVLEQIRAGREQGVDGHVIASFG 79 (245)
T ss_dssp SCSSCCSHHHHHHHHHHHHHHHHHHHHHTCSEEEEC-CC
T ss_pred CchhhcChhHHHHHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 7778888766555555555544 34599999988876
No 425
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=65.37 E-value=39 Score=24.95 Aligned_cols=88 Identities=20% Similarity=0.135 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh--cCCCEEEeCCCCCCCCCCCccCCCCccCCCCc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 219 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~--~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~ 219 (290)
+.++.... +.. ..++++|+.... +.. -.+..+..+++ .++||++=+++. .
T Consensus 39 ~~~~a~~~---l~~-~~~dlvi~d~~l----~~~-~g~~~~~~l~~~~~~~~ii~~s~~~-----------------~-- 90 (137)
T 3hdg_A 39 DGEEGERL---FGL-HAPDVIITDIRM----PKL-GGLEMLDRIKAGGAKPYVIVISAFS-----------------E-- 90 (137)
T ss_dssp SHHHHHHH---HHH-HCCSEEEECSSC----SSS-CHHHHHHHHHHTTCCCEEEECCCCC-----------------C--
T ss_pred CHHHHHHH---Hhc-cCCCEEEEeCCC----CCC-CHHHHHHHHHhcCCCCcEEEEecCc-----------------C--
Confidence 45554443 433 367899987643 110 12345566666 367888745554 2
Q ss_pred ccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 220 ELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 220 ~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
......+..+||++ +|.|-+ ++++|...++.+.+-+..
T Consensus 91 ---~~~~~~~~~~g~~~-~l~kP~-------------~~~~l~~~i~~~~~~~~~ 128 (137)
T 3hdg_A 91 ---MKYFIKAIELGVHL-FLPKPI-------------EPGRLMETLEDFRHIKLA 128 (137)
T ss_dssp ---HHHHHHHHHHCCSE-ECCSSC-------------CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHhCCcce-eEcCCC-------------CHHHHHHHHHHHHHHHhc
Confidence 45566788999997 455443 567777777777665543
No 426
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=65.32 E-value=10 Score=34.69 Aligned_cols=91 Identities=24% Similarity=0.174 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK 105 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~ 105 (290)
+.+...++|++|.+ +|++++-...-... ... . ..+.+ ..+..++++++..++|++. .+++++.++.+.+
T Consensus 227 ~~~~~~~~a~~l~~----~Gvd~i~v~~~~~~-~~~-~-~~~~~--~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~ 297 (338)
T 1z41_A 227 DIADHIGFAKWMKE----QGVDLIDCSSGALV-HAD-I-NVFPG--YQVSFAEKIREQADMATGAVGMITDGSMAEEILQ 297 (338)
T ss_dssp CHHHHHHHHHHHHH----TTCCEEEEECCCSS-CCC-C-CCCTT--TTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEecCccc-cCC-C-CCCcc--chHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Confidence 45556677766655 69888755321100 000 0 00111 2356677777778999998 5678888877654
Q ss_pred -h-cceecccCCccCCHHHHHHHH
Q 022892 106 -V-ADIIQIPAFLCRQTDLLVAAA 127 (290)
Q Consensus 106 -~-~d~~kIgs~~~~n~~lL~~~a 127 (290)
. +|++.+|...+.|.++.+.+.
T Consensus 298 ~G~aD~V~iGR~~i~nPdl~~ki~ 321 (338)
T 1z41_A 298 NGRADLIFIGRELLRDPFFARTAA 321 (338)
T ss_dssp TTSCSEEEECHHHHHCTTHHHHHH
T ss_pred cCCceEEeecHHHHhCchHHHHHH
Confidence 4 999999999999988887764
No 427
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=65.31 E-value=64 Score=28.12 Aligned_cols=133 Identities=12% Similarity=0.008 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCE--EeccccccCCCCCcc--cCCC-CC---hhHHHHHHHHHHHhcCCcEEEee------
Q 022892 29 EEHIMRMAKHIKSISTKVGLPL--VFKSSFDKANRTSSK--SFRG-PG---MVEGLKILEKVKIAYDIPIVTDV------ 94 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~--V~~~~~~k~~rts~~--~~~g-~~---~~~~l~~L~~~~~~~Gi~~~s~~------ 94 (290)
.+..-++.+++.++++++|-.- ..+ +..++..- .... .. ...-+.-+.+.+++.|..+....
T Consensus 12 ~~~s~~tr~rV~~aa~elgY~pn~~Ar----~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~ 87 (342)
T 1jx6_A 12 LDEFPEQRNLTNALSEAVRAQPVPLSK----PTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPN 87 (342)
T ss_dssp HHHCHHHHHHHHHHHHHHHSCCCCCSS----CCSSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTT
T ss_pred HHhcHHHHHHHHHHHHHhcCCCCcccc----ccCCceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCc
Confidence 3467789999999999999421 111 00111000 0011 11 12445567888999998665432
Q ss_pred cCcc----cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEe--CCC-------CC--------CHHHHHHHHHH
Q 022892 95 HETV----QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIK--KGQ-------FC--------ASSVMVNSAEK 152 (290)
Q Consensus 95 ~d~~----~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVils--tG~-------~~--------tl~e~~~Ave~ 152 (290)
.|+. .++.+.+ .+|.+-++.......+.++.+.+.+.|+++- +.. .. +.+-...++++
T Consensus 88 ~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~ 167 (342)
T 1jx6_A 88 ADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVREWDKHQPFLYVGFDHAEGSRELATE 167 (342)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETCCSCBGGGTTSCCSEEEECCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecCCCcccccccCCCceEEecCcHHHHHHHHHH
Confidence 2322 2233333 5888888432222356778887778887643 210 10 23456677888
Q ss_pred HHHc-C-CCcEEEEe
Q 022892 153 VRLA-G-NPNVMVCE 165 (290)
Q Consensus 153 i~~~-G-n~~i~L~~ 165 (290)
+.+. | ..+|.++.
T Consensus 168 L~~~~Gg~~~I~~i~ 182 (342)
T 1jx6_A 168 FGKFFPKHTYYSVLY 182 (342)
T ss_dssp HHHHSCTTCEEEEEC
T ss_pred HHHHcCCCceEEEEE
Confidence 8886 6 77777764
No 428
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=65.30 E-value=27 Score=32.48 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=57.4
Q ss_pred CCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCC---EEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcE
Q 022892 14 AEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLP---LVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPI 90 (290)
Q Consensus 14 ~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~---~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~ 90 (290)
++++.+=+-|...+|.++.++.|++|.++.++.|++ ++.+- |-| ++|++..+++. +.||.+
T Consensus 94 ~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKI-----P~T----------~eGl~A~~~L~-~~GI~~ 157 (334)
T 3hjz_A 94 SGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKI-----AAT----------WEGIKAAEILE-KEGIKC 157 (334)
T ss_dssp SSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECS----------HHHHHHHHHHH-HTTCCE
T ss_pred CCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEe-----CCC----------HHHHHHHHHHH-HCCCcE
Confidence 455554444443469999999999999999988876 33332 211 47888888775 569999
Q ss_pred -EEeecCcccHHHHhh-hccee
Q 022892 91 -VTDVHETVQCEEVGK-VADII 110 (290)
Q Consensus 91 -~s~~~d~~~~~~l~~-~~d~~ 110 (290)
+|-+|+..++-...+ .+.++
T Consensus 158 N~TliFS~~Qa~~aa~AGa~~I 179 (334)
T 3hjz_A 158 NLTLLFNFCQAVTCANANITLI 179 (334)
T ss_dssp EEESCCSHHHHHHHHHTTCSEE
T ss_pred EEEEeCCHHHHHHHHHcCCcEE
Confidence 667899988887766 45444
No 429
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=64.80 E-value=8.1 Score=36.21 Aligned_cols=126 Identities=11% Similarity=0.135 Sum_probs=71.7
Q ss_pred CCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCC----CCcc--cCCCC---Ch-hHHHHHHHHHHH
Q 022892 15 EPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANR----TSSK--SFRGP---GM-VEGLKILEKVKI 84 (290)
Q Consensus 15 ~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~r----ts~~--~~~g~---~~-~~~l~~L~~~~~ 84 (290)
.|++|=--|.. +.+...+.|+.+.+ +|+|+|.-..-.. .| .... .+.|+ .+ ...+++++++++
T Consensus 221 ~Pv~vKi~p~~--~~~~~~~ia~~~~~----aGadgi~v~ntt~-~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~ 293 (367)
T 3zwt_A 221 PAVLVKIAPDL--TSQDKEDIASVVKE----LGIDGLIVTNTTV-SRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYA 293 (367)
T ss_dssp CEEEEEECSCC--CHHHHHHHHHHHHH----HTCCEEEECCCBS-CCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCC--CHHHHHHHHHHHHH----cCCCEEEEeCCCc-ccccccccccccccCCcCCcccchhHHHHHHHHHH
Confidence 34443334554 55566777777665 6999876432111 11 0100 11111 11 234678889988
Q ss_pred hc--CCcEEE--eecCcccHHHHhh-hcceecccCCcc-CCHHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 022892 85 AY--DIPIVT--DVHETVQCEEVGK-VADIIQIPAFLC-RQTDLLVAAAKTGKIINIKKGQFCASSVMVN 148 (290)
Q Consensus 85 ~~--Gi~~~s--~~~d~~~~~~l~~-~~d~~kIgs~~~-~n~~lL~~~a~~~~PVilstG~~~tl~e~~~ 148 (290)
.. .+|++. -+++.+++..+.. .+|.++||+..+ .+..+++.+.+-=.-..-..|.. +++|+..
T Consensus 294 ~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~~m~~~G~~-~i~e~~G 362 (367)
T 3zwt_A 294 LTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFG-GVTDAIG 362 (367)
T ss_dssp HTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCS-SHHHHTT
T ss_pred HcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHHHHHHcCCC-CHHHhhC
Confidence 88 799988 6888888877655 799999999986 34555544432111112234555 6666543
No 430
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=64.73 E-value=5.8 Score=34.27 Aligned_cols=68 Identities=7% Similarity=-0.008 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
..+..++..++.++.|+++|+..|..-.......+....++. +.+.|.++.+++++.||.+.-|+.+.
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lE~~n~ 154 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEET--FIENFRYAADKLAPHGITVLVEPLNT 154 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHH--HHHHHHHHHHHHGGGTCEEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHH--HHHHHHHHHHHHHHcCCEEEEeeCCc
Confidence 356788999999999999999987653221000000001110 13567788889999999999998654
No 431
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=64.62 E-value=61 Score=29.83 Aligned_cols=22 Identities=18% Similarity=0.196 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEec
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFK 53 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~ 53 (290)
+.+...+.|+++++ .|++.|+.
T Consensus 147 ~~e~~~~~a~~~~~----~Gf~~iKi 168 (384)
T 2pgw_A 147 TAEELARDAAVGHA----QGERVFYL 168 (384)
T ss_dssp SHHHHHHHHHHHHH----TTCCEEEE
T ss_pred CHHHHHHHHHHHHH----cCCCEEEE
Confidence 56666677777665 59999885
No 432
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=64.53 E-value=67 Score=27.47 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=30.1
Q ss_pred HHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 124 VAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 124 ~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
+.+.+.|..+.+.+... +++++...++. .+.+++-+|....
T Consensus 146 ~~a~~~Gv~l~lE~~~~-~~~~~~~l~~~---~~~~~~g~~~D~~ 186 (290)
T 3tva_A 146 THAANHGQAVHLETGQE-SADHLLEFIED---VNRPNLGINFDPA 186 (290)
T ss_dssp HHHHTTTCEEEEECCSS-CHHHHHHHHHH---HCCTTEEEEECHH
T ss_pred HHHHHcCCEEEEecCCC-CHHHHHHHHHh---cCCCCEEEEeccH
Confidence 44456799999999875 88877766554 4667888887765
No 433
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=64.48 E-value=75 Score=27.95 Aligned_cols=138 Identities=13% Similarity=-0.000 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhcCCcEEEe--ecCcc-cHHHHhh-hcceecccCCccCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTD--VHETV-QCEEVGK-VADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVN 148 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~--~~d~~-~~~~l~~-~~d~~kIgs~~~~n~-~lL~~~a~~~~PVilstG~~~tl~e~~~ 148 (290)
.-++.+++... .+++-.- +.+|+ .++.+.+ .+|++-+......+. ..++++-+.|+-+++..... |+-|...
T Consensus 75 ~~v~~lr~~~p--~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~-Tp~e~l~ 151 (246)
T 3inp_A 75 MVLKALRDYGI--TAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA-TGIDCLK 151 (246)
T ss_dssp HHHHHHHHHTC--CSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTT-CCSGGGT
T ss_pred HHHHHHHHhCC--CCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCC-CCHHHHH
Confidence 44555555431 4555442 34443 2444444 689999887766554 56777878898888888777 5444332
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCC---CCCchhHHHHHh------cCCCEEEeCCCCCCCCCCCccCCCCccCCCCc
Q 022892 149 SAEKVRLAGNPNVMVCERGTMFGYNDL---IVDPRNLEWMRE------ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 219 (290)
Q Consensus 149 Ave~i~~~Gn~~i~L~~~gs~~~y~~~---~~dL~~i~~lk~------~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~ 219 (290)
.+.. ..+.+|+-+. .+++.-. .-.+.-+..+|+ .+++|.+|..=+
T Consensus 152 ---~~l~--~vD~VlvMsV-~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-------------------- 205 (246)
T 3inp_A 152 ---YVES--NIDRVLIMSV-NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-------------------- 205 (246)
T ss_dssp ---TTGG--GCSEEEEECS-CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC--------------------
T ss_pred ---HHHh--cCCEEEEeee-cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC--------------------
Confidence 2222 2345555433 2222221 112445555554 236777763221
Q ss_pred ccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 220 ELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 220 ~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
+..+..++.+|||.+|+=+-+
T Consensus 206 ---~~ti~~~~~aGAD~~V~GSaI 226 (246)
T 3inp_A 206 ---PYNIAEIAVCGVNAFVAGSAI 226 (246)
T ss_dssp ---TTTHHHHHTTTCCEEEESHHH
T ss_pred ---HHHHHHHHHcCCCEEEEehHH
Confidence 223556788999988887654
No 434
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=64.45 E-value=31 Score=29.99 Aligned_cols=26 Identities=8% Similarity=0.060 Sum_probs=19.8
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 022892 137 KGQFCASSVMVNSAEKVRLAGNPNVMV 163 (290)
Q Consensus 137 tG~~~tl~e~~~Ave~i~~~Gn~~i~L 163 (290)
+|-. +.+++.+.++.+...|-+-|.|
T Consensus 26 ~g~~-~~~~~~~~~~~l~~~Gad~iel 51 (262)
T 1rd5_A 26 AGDP-DLATTAEALRLLDGCGADVIEL 51 (262)
T ss_dssp TTSS-CHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 5555 7799999999888888765554
No 435
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=64.30 E-value=24 Score=32.88 Aligned_cols=75 Identities=15% Similarity=0.086 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceecccC---Ccc----CCHHHHHHHHh-c--CCeEEEeCCCCCCH
Q 022892 76 LKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIPA---FLC----RQTDLLVAAAK-T--GKIINIKKGQFCAS 143 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs---~~~----~n~~lL~~~a~-~--~~PVilstG~~~tl 143 (290)
++.++.+++..++|++. .+.+++.+..+.+ .+|++.|.. +.. ...+.|.++.+ . +.||+.+-|.. +.
T Consensus 218 ~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~-~g 296 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVR-RG 296 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCC-SH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCC-CH
Confidence 55677777778999987 6888888888877 699998844 222 34456665543 3 68999999999 99
Q ss_pred HHHHHHHH
Q 022892 144 SVMVNSAE 151 (290)
Q Consensus 144 ~e~~~Ave 151 (290)
+++..++.
T Consensus 297 ~D~~kala 304 (368)
T 2nli_A 297 EHVAKALA 304 (368)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888754
No 436
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=63.94 E-value=39 Score=24.53 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=47.6
Q ss_pred HHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCC
Q 022892 126 AAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPA 204 (290)
Q Consensus 126 ~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~ 204 (290)
+.+.+.-|... .+.++... .+. ...++++++.... |.. --+..+..+++ .++||++=+++.
T Consensus 22 L~~~g~~v~~~----~~~~~al~---~~~-~~~~dlii~D~~~----p~~-~g~~~~~~lr~~~~~~ii~~t~~~----- 83 (120)
T 3f6p_A 22 LRKEGYEVHCA----HDGNEAVE---MVE-ELQPDLILLDIML----PNK-DGVEVCREVRKKYDMPIIMLTAKD----- 83 (120)
T ss_dssp HHHTTCEEEEE----SSHHHHHH---HHH-TTCCSEEEEETTS----TTT-HHHHHHHHHHTTCCSCEEEEEESS-----
T ss_pred HHhCCEEEEEe----CCHHHHHH---HHh-hCCCCEEEEeCCC----CCC-CHHHHHHHHHhcCCCCEEEEECCC-----
Confidence 44556655432 25555444 343 3568899987643 110 01334555666 678987745554
Q ss_pred CCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 205 GKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 205 ~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
. ......+...||++ +|.|-+
T Consensus 84 ------------~-----~~~~~~~~~~ga~~-~l~KP~ 104 (120)
T 3f6p_A 84 ------------S-----EIDKVIGLEIGADD-YVTKPF 104 (120)
T ss_dssp ------------C-----HHHHHHHHHTTCCE-EEEESC
T ss_pred ------------C-----hHHHHHHHhCCcce-eEcCCC
Confidence 2 44556678999997 677755
No 437
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=63.89 E-value=13 Score=31.88 Aligned_cols=90 Identities=14% Similarity=0.132 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~-~~d 108 (290)
..+.++++.+ +|++.|.....+ ....++++. +..++++++..++|+++ -+.+++++..+.+ .++
T Consensus 153 ~~e~~~~~~~----~G~~~i~~~~~~-----~~g~~~g~~----~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gad 219 (253)
T 1thf_D 153 LRDWVVEVEK----RGAGEILLTSID-----RDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD 219 (253)
T ss_dssp HHHHHHHHHH----TTCSEEEEEETT-----TTTSCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHH----CCCCEEEEEecc-----CCCCCCCCC----HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCh
Confidence 3455555544 577766543222 112223332 45555555667888887 3566666666655 588
Q ss_pred eecccCCccCCH----HHHHHHHhcCCeEE
Q 022892 109 IIQIPAFLCRQT----DLLVAAAKTGKIIN 134 (290)
Q Consensus 109 ~~kIgs~~~~n~----~lL~~~a~~~~PVi 134 (290)
.+-||+.-+.+. ..++.+...+.||-
T Consensus 220 gv~vGsal~~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 220 AALAASVFHFREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp EEEESHHHHTTCSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHcCCccc
Confidence 888887766442 33444555555553
No 438
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=63.85 E-value=6.6 Score=33.53 Aligned_cols=66 Identities=14% Similarity=0.186 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccccCCC-CC-cccCCCCChhHHHHHHHHHHHhcCCcEEEeecCcc
Q 022892 30 EHIMRMAKHIKSISTKVGLPLVFKSSFDKANR-TS-SKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHETV 98 (290)
Q Consensus 30 ~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~r-ts-~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~ 98 (290)
+..++..++.++.|+++|+..|..-.... +. .+ ...++ .+.+.++.+.+++++.|+.+.-|++...
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~-~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVPLVT-EQKIVKEEIKK--SSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCBC-SSCCCHHHHHH--HHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCC-CCCCCHHHHHH--HHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 45688999999999999999876522110 11 00 00011 0135677888899999999999999765
No 439
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=63.79 E-value=55 Score=27.60 Aligned_cols=91 Identities=11% Similarity=0.028 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCcEEEeecC--cc----cHHHHhh-hcceecccCCccCCHHHHHHHHh-cCCeEEEeCCCCC----
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHE--TV----QCEEVGK-VADIIQIPAFLCRQTDLLVAAAK-TGKIINIKKGQFC---- 141 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d--~~----~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~-~~~PVilstG~~~---- 141 (290)
.-+.-+.+.+++.|..+.....+ ++ .++.+.+ .+|.+-+.+.+.. .+.++.+.+ .+.||++=.....
T Consensus 38 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~~~~~~~ 116 (296)
T 3brq_A 38 ELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRRLRKNSS 116 (296)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCCCSSSGG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccccCCCCC
Confidence 33444566666666655443221 11 1222222 4665555444332 345566666 6777665332110
Q ss_pred ------CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 142 ------ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 142 ------tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.+-...+++++.+.|..+|.++.
T Consensus 117 ~~V~~d~~~~~~~a~~~l~~~G~~~I~~i~ 146 (296)
T 3brq_A 117 HSVWCDHKQTSFNAVAELINAGHQEIAFLT 146 (296)
T ss_dssp GEECCCHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEEchHHHHHHHHHHHHHCCCceEEEEc
Confidence 223346667787777877777664
No 440
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=63.75 E-value=1.1e+02 Score=29.69 Aligned_cols=142 Identities=17% Similarity=0.128 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHh--cCCcEEEeecCcccHHHHhh------hcceeccc--CCccCCHHHHHHHHhcCC-eEEEeCCCC--
Q 022892 74 EGLKILEKVKIA--YDIPIVTDVHETVQCEEVGK------VADIIQIP--AFLCRQTDLLVAAAKTGK-IINIKKGQF-- 140 (290)
Q Consensus 74 ~~l~~L~~~~~~--~Gi~~~s~~~d~~~~~~l~~------~~d~~kIg--s~~~~n~~lL~~~a~~~~-PVilstG~~-- 140 (290)
++-..+++.|++ .|++++.+-+...+++.+.+ ..-|+|+- ...-....+++.+...|. .|+|.-++.
T Consensus 207 ~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~ 286 (511)
T 1kbi_A 207 EGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSL 286 (511)
T ss_dssp TTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSC
T ss_pred hHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc
Confidence 345579999999 99999887776667776643 23477773 221223355566655564 455655532
Q ss_pred CC-HHHHHHHHH----HHHH-cCCCcEEEEeecCC---C--CCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCcc
Q 022892 141 CA-SSVMVNSAE----KVRL-AGNPNVMVCERGTM---F--GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKL 208 (290)
Q Consensus 141 ~t-l~e~~~Ave----~i~~-~Gn~~i~L~~~gs~---~--~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~ 208 (290)
+. ..++++... .+.. .|. . ...++. + ...+..+....+.++++ .++||++= .+
T Consensus 287 g~R~~~~r~g~~~p~~~~~~~~g~-~---~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK---gv-------- 351 (511)
T 1kbi_A 287 GQREKDMKLKFSNTKAGPKAMKKT-N---VEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK---GV-------- 351 (511)
T ss_dssp CCCHHHHHHHHTTCC-------CC-C---CSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEE---EE--------
T ss_pred cccHHHHhccCCCCcccccccccc-c---ccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEE---eC--------
Confidence 22 556655410 1110 110 0 001110 0 01122355677889998 89999871 11
Q ss_pred CCCCccCCCCcccHHHHHHHHHHcCCCEEEEeee
Q 022892 209 DGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 242 (290)
Q Consensus 209 ~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH 242 (290)
+. ...++.+..+||+|+++=-|
T Consensus 352 --------~~----~e~A~~a~~aGad~I~vs~h 373 (511)
T 1kbi_A 352 --------QR----TEDVIKAAEIGVSGVVLSNH 373 (511)
T ss_dssp --------CS----HHHHHHHHHTTCSEEEECCT
T ss_pred --------CC----HHHHHHHHHcCCCEEEEcCC
Confidence 11 45688889999999988555
No 441
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=63.74 E-value=11 Score=34.64 Aligned_cols=89 Identities=27% Similarity=0.234 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccc--cccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHh
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSS--FDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVG 104 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~--~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~ 104 (290)
.+...++|++|.+ +|++++-... +. + .+. ..+.+ ..+..++++++..++|++.. +.+++.++.+.
T Consensus 228 ~~~~~~la~~L~~----~Gvd~i~vs~g~~~--~--~~~-~~~~~--~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L 296 (340)
T 3gr7_A 228 AKDYVPYAKRMKE----QGVDLVDVSSGAIV--P--ARM-NVYPG--YQVPFAELIRREADIPTGAVGLITSGWQAEEIL 296 (340)
T ss_dssp GGGHHHHHHHHHH----TTCCEEEEECCCSS--C--CCC-CCCTT--TTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cCCCEEEEecCCcc--C--CCC-CCCcc--ccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHH
Confidence 4556777777766 5988765432 21 1 000 01111 23566777777889999984 66787777654
Q ss_pred h-h-cceecccCCccCCHHHHHHHHh
Q 022892 105 K-V-ADIIQIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 105 ~-~-~d~~kIgs~~~~n~~lL~~~a~ 128 (290)
+ . +|++.+|...+.|.+|.+.+..
T Consensus 297 ~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 297 QNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp HTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred HCCCeeEEEecHHHHhCchHHHHHHH
Confidence 4 4 9999999999999988877653
No 442
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=63.70 E-value=34 Score=29.55 Aligned_cols=115 Identities=11% Similarity=0.015 Sum_probs=65.2
Q ss_pred HhhhcceecccCCccC--CHHHHHHHHh-cCC-eEEEeCCCCCCHH-HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCC
Q 022892 103 VGKVADIIQIPAFLCR--QTDLLVAAAK-TGK-IINIKKGQFCASS-VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV 177 (290)
Q Consensus 103 l~~~~d~~kIgs~~~~--n~~lL~~~a~-~~~-PVilstG~~~tl~-e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~ 177 (290)
+.+.++++|+|-.... -.+.++++.+ .++ +|++-.=.+ ++. -+..+++.+.+. +.+-+|+-. +|. ..+
T Consensus 22 l~~~v~~~KvG~~l~~~~G~~~v~~L~~~~~~~~VflDlK~~-DI~nTv~~~~~~~~~~---d~vTVh~~~--G~~-~~~ 94 (222)
T 4dbe_A 22 MENELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLA-DIGYIMKSIVERLSFA---NSFIAHSFI--GVK-GSL 94 (222)
T ss_dssp HGGGCSEEEEEHHHHHHHCHHHHHHHHHTCCCSEEEEEEEEC-SCHHHHHHHHTTCTTC---SEEEEESTT--CTT-TTH
T ss_pred hCCcCcEEEECHHHHHhhCHHHHHHHHHhcCCCeEEEEeeec-chHHHHHHHHHHHHhC---CEEEEEcCc--CcH-HHH
Confidence 3346999999988774 4567788877 589 999765555 554 444455433322 677778733 221 112
Q ss_pred CchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEE
Q 022892 178 DPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 239 (290)
Q Consensus 178 dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~I 239 (290)
. .++...++.+.-|.+-.+-++ |+ ....+....+..|...|++|+|.
T Consensus 95 ~-~a~~~~~~~~~~v~vLts~s~--~~------------~~~~~~~~~a~~a~~~g~~GvV~ 141 (222)
T 4dbe_A 95 D-ELKRYLDANSKNLYLVAVMSH--EG------------WSTLFADYIKNVIREISPKGIVV 141 (222)
T ss_dssp H-HHHHHHHHTTCEEEEEEECSS--TT------------CCCTTHHHHHHHHHHHCCSEEEE
T ss_pred H-HHHHHHHhcCCcEEEEEeCCC--cc------------hHHHHHHHHHHHHHHhCCCEEEE
Confidence 1 233333333433433344443 22 11233456777788899999875
No 443
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=63.64 E-value=23 Score=30.28 Aligned_cols=60 Identities=22% Similarity=0.104 Sum_probs=31.5
Q ss_pred HcCCCEEeccccccCCCCCccc-----------C-CCCCh--hHHHHHHHHHHHhcCCcEEEeecCcccHHHHhh
Q 022892 45 KVGLPLVFKSSFDKANRTSSKS-----------F-RGPGM--VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGK 105 (290)
Q Consensus 45 ~~G~~~V~~~~~~k~~rts~~~-----------~-~g~~~--~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~ 105 (290)
++|+|++=+..|.+.||.-... + ...|+ .....++.+.+++.++.++== |..++.+++..
T Consensus 20 ~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQL-HG~e~~~~~~~ 93 (205)
T 1nsj_A 20 ESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQL-HGEEPIELCRK 93 (205)
T ss_dssp HHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEE-CSCCCHHHHHH
T ss_pred HcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEE-CCCCCHHHHHH
Confidence 3699998888777777752210 0 00111 234556666666666665532 33334444443
No 444
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=63.53 E-value=63 Score=27.29 Aligned_cols=118 Identities=8% Similarity=-0.049 Sum_probs=67.8
Q ss_pred HHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe-ecCcccHHHHhh--------hcc
Q 022892 38 HIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD-VHETVQCEEVGK--------VAD 108 (290)
Q Consensus 38 ~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~-~~d~~~~~~l~~--------~~d 108 (290)
..++.++++|++.|-..... -++ ... .+.++.+++.+++.||.+.+- ++....++.+.+ .++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~-----~~~---~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~ 104 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFH-----LPL---NST-DEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVK 104 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTT-----SCT---TCC-HHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHhCCCEEEEeccc-----CCC---CCC-HHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence 34445566899988654321 011 112 567889999999999998762 222234444333 244
Q ss_pred eecccCCccCCH-HHHHHHHhcCCeEEEeCCC--C---CCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 109 IIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQ--F---CASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 109 ~~kIgs~~~~n~-~lL~~~a~~~~PVilstG~--~---~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
.+.+... ..++ .+.+.+.+.|..+.+.+-. . .+.+++.. .+.. .++++-+|.....
T Consensus 105 ~v~~~p~-~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~---ll~~-~~p~vg~~~D~~h 166 (257)
T 3lmz_A 105 LIVGVPN-YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWV---HTKD-LDPRIGMCLDVGH 166 (257)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHH---HHTT-SCTTEEEEEEHHH
T ss_pred EEEecCC-HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHH---HHHh-CCCCccEEEchhh
Confidence 4444322 2333 3445556679999999883 1 24555444 4442 4578888877653
No 445
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=63.50 E-value=41 Score=29.31 Aligned_cols=121 Identities=7% Similarity=-0.088 Sum_probs=58.9
Q ss_pred HHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe-ec------Cc----------ccHHH
Q 022892 40 KSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD-VH------ET----------VQCEE 102 (290)
Q Consensus 40 ~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~-~~------d~----------~~~~~ 102 (290)
++.++++|++.|-..... . ..+... ...++.+++.+++.||.+.+- ++ ++ ..++.
T Consensus 42 l~~a~~~G~~~vEl~~~~--~----~~~~~~--~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 113 (296)
T 2g0w_A 42 VKVAAENGFDGIGLRAEN--Y----VDALAA--GLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHM 113 (296)
T ss_dssp HHHHHHTTCSEEEEEHHH--H----HHHHHT--TCCHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCHHH--H----HHHHhc--CCcHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHHHHHHHHH
Confidence 344556798887553211 0 001000 134677888888899887752 21 11 11222
Q ss_pred Hhh-hcceecccCCccCC----HHHHHHHHh--cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 103 VGK-VADIIQIPAFLCRQ----TDLLVAAAK--TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 103 l~~-~~d~~kIgs~~~~n----~~lL~~~a~--~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
..+ .++.+.+|+..-.+ .+.|++++. .|..+.+.+-....+.....+.+.+...+.+++-+|.-..
T Consensus 114 A~~lGa~~v~~g~~~~~~~~~~~~~l~~l~~~a~Gv~l~lE~~~~~~~~~~~~~~~l~~~v~~~~vgl~~D~~ 186 (296)
T 2g0w_A 114 ARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTW 186 (296)
T ss_dssp HHHHTCCEEEECCCSCCCHHHHHHHHHHHHHHHTTSEEEEECCTTSSSCSHHHHHHHHHHHTCTTEEEEEEHH
T ss_pred HHHcCCCEEEEcCCCCCCHHHHHHHHHHHHHHhcCCEEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEehh
Confidence 223 35666666541111 122222221 6888888875322223333344445555666777766554
No 446
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=63.46 E-value=41 Score=29.54 Aligned_cols=76 Identities=5% Similarity=-0.070 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhcCCcEEE--eecC-cccHHHHhhhcc-eecccC-------Cc---cCCHHHHHHHHh-cCCeEEEeCCC
Q 022892 75 GLKILEKVKIAYDIPIVT--DVHE-TVQCEEVGKVAD-IIQIPA-------FL---CRQTDLLVAAAK-TGKIINIKKGQ 139 (290)
Q Consensus 75 ~l~~L~~~~~~~Gi~~~s--~~~d-~~~~~~l~~~~d-~~kIgs-------~~---~~n~~lL~~~a~-~~~PVilstG~ 139 (290)
.+..+.+.++++|+..+. .+-. .+.+..+.+..+ ++.+-+ +. -.-.++++.+.+ ++.||.+--|.
T Consensus 135 ~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI 214 (268)
T 1qop_A 135 ESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGI 214 (268)
T ss_dssp GCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSC
T ss_pred HHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCC
Confidence 466777888999976543 3322 233444444322 333311 11 112466676654 47899999998
Q ss_pred CCCHHHHHHHHH
Q 022892 140 FCASSVMVNSAE 151 (290)
Q Consensus 140 ~~tl~e~~~Ave 151 (290)
. |.+++..++.
T Consensus 215 ~-t~e~~~~~~~ 225 (268)
T 1qop_A 215 S-SPEQVSAAVR 225 (268)
T ss_dssp C-SHHHHHHHHH
T ss_pred C-CHHHHHHHHH
Confidence 8 8888877543
No 447
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=63.19 E-value=40 Score=29.95 Aligned_cols=91 Identities=5% Similarity=-0.047 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeecC--cc----cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCC-------
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHE--TV----QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQ------- 139 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d--~~----~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~------- 139 (290)
.-+..+.+.+++.|..++....+ ++ .++.+.+ .+|-+-+.+.... .+.++.+...+.||++=...
T Consensus 87 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~~~~~~~ 165 (355)
T 3e3m_A 87 QTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEKPAHPIGH 165 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSCCSSCSSE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCccCCCCCC
Confidence 44566888999999988765443 22 1223333 5787777554443 46778888899999864211
Q ss_pred ----CCCHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 140 ----FCASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 140 ----~~tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
. +..-...|++++.+.|..+|.++..
T Consensus 166 ~V~~D-~~~~~~~a~~~L~~~G~r~I~~i~~ 195 (355)
T 3e3m_A 166 TVGFS-NERAAYDMTNALLARGFRKIVFLGE 195 (355)
T ss_dssp EEECC-HHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEEeC-hHHHHHHHHHHHHHCCCCeEEEEcc
Confidence 1 3456677889999999999888764
No 448
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=63.12 E-value=81 Score=27.89 Aligned_cols=127 Identities=11% Similarity=0.046 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCC-EEeccccccCCCCCcc-cCCCCChhHHHHHHHHHHHhcCCcEEEee---cCccc---
Q 022892 28 SEEHIMRMAKHIKSISTKVGLP-LVFKSSFDKANRTSSK-SFRGPGMVEGLKILEKVKIAYDIPIVTDV---HETVQ--- 99 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~-~V~~~~~~k~~rts~~-~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~---~d~~~--- 99 (290)
+.+...+.|+++.+ +|+| +|-...-. |.+... .| +...+.-.+.++.+.+..++|++.-. ++.+.
T Consensus 104 ~~~~~~~~a~~~~~----~g~d~~iein~~~--P~~~g~~~~-g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~ 176 (311)
T 1jub_A 104 SAAENIAMLKKIQE----SDFSGITELNLSC--PNVPGEPQL-AYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDI 176 (311)
T ss_dssp SHHHHHHHHHHHHH----SCCCSEEEEESCC--CCSSSCCCG-GGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHH
T ss_pred CHHHHHHHHHHHHh----cCCCeEEEEeccC--CCCCCcccc-cCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 66777777777776 5999 77654321 222000 12 11112334556666666688887632 23323
Q ss_pred -HHHHhh-hcceecccCCc-----c-------------------------CCHHHHHHHHh-c--CCeEEEeCCCCCCHH
Q 022892 100 -CEEVGK-VADIIQIPAFL-----C-------------------------RQTDLLVAAAK-T--GKIINIKKGQFCASS 144 (290)
Q Consensus 100 -~~~l~~-~~d~~kIgs~~-----~-------------------------~n~~lL~~~a~-~--~~PVilstG~~~tl~ 144 (290)
++.+.+ .+|++.+..+. + ...++++++.+ . +.||+..-|.. |.+
T Consensus 177 ~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~-~~~ 255 (311)
T 1jub_A 177 MAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIE-TGQ 255 (311)
T ss_dssp HHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC-SHH
T ss_pred HHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCC-CHH
Confidence 333444 47877665432 0 12456666654 4 78999999988 888
Q ss_pred HHHHHHHHHHHcCCCcEEEEeec
Q 022892 145 VMVNSAEKVRLAGNPNVMVCERG 167 (290)
Q Consensus 145 e~~~Ave~i~~~Gn~~i~L~~~g 167 (290)
++..++. .|. +.+.+=++
T Consensus 256 da~~~l~----~GA-d~V~vg~~ 273 (311)
T 1jub_A 256 DAFEHLL----CGA-TMLQIGTA 273 (311)
T ss_dssp HHHHHHH----HTC-SEEEECHH
T ss_pred HHHHHHH----cCC-CEEEEchH
Confidence 8777653 464 34444333
No 449
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=62.98 E-value=71 Score=27.21 Aligned_cols=120 Identities=12% Similarity=0.057 Sum_probs=75.1
Q ss_pred HHHHhcCCcEEEeecCcccHHH----Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 022892 81 KVKIAYDIPIVTDVHETVQCEE----VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 155 (290)
Q Consensus 81 ~~~~~~Gi~~~s~~~d~~~~~~----l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~ 155 (290)
+...+.++.-+-...+++.+.. +.+ .++++++.-.+..-.+.++++++.-..+.+--|+-.+.+++..|++
T Consensus 11 ~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~---- 86 (214)
T 1wbh_A 11 SILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTE---- 86 (214)
T ss_dssp HHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHH----
T ss_pred HHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHH----
Confidence 3346677777767777765433 333 4999999977766677788665543345555566668888888765
Q ss_pred cCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 156 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 156 ~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
.|-+-+| .+. .|+..+..-++.+.+++. .-|+ +.-+..|..+|+|
T Consensus 87 aGAd~v~---~p~--------~d~~v~~~~~~~g~~~i~-G~~t-----------------------~~e~~~A~~~Gad 131 (214)
T 1wbh_A 87 AGAQFAI---SPG--------LTEPLLKAATEGTIPLIP-GIST-----------------------VSELMLGMDYGLK 131 (214)
T ss_dssp HTCSCEE---ESS--------CCHHHHHHHHHSSSCEEE-EESS-----------------------HHHHHHHHHTTCC
T ss_pred cCCCEEE---cCC--------CCHHHHHHHHHhCCCEEE-ecCC-----------------------HHHHHHHHHCCCC
Confidence 4665443 321 255555555558888765 2455 3345678899999
Q ss_pred EEEE
Q 022892 236 GVFM 239 (290)
Q Consensus 236 G~~I 239 (290)
-+.+
T Consensus 132 ~v~~ 135 (214)
T 1wbh_A 132 EFKF 135 (214)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 450
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=62.90 E-value=45 Score=29.48 Aligned_cols=134 Identities=11% Similarity=0.122 Sum_probs=71.0
Q ss_pred HcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhc-----CCcEEEeecCcccHHHHhh-hc-ceecccCCcc
Q 022892 45 KVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAY-----DIPIVTDVHETVQCEEVGK-VA-DIIQIPAFLC 117 (290)
Q Consensus 45 ~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~-----Gi~~~s~~~d~~~~~~l~~-~~-d~~kIgs~~~ 117 (290)
+.|+|+|...+... ..+.|++ ..-+...++.+.. ++|+++.. ...++.+.. .. .+.-++....
T Consensus 88 ~~g~d~IviaCnta------~~~~G~~--~~~~~~~~l~~~~~~~~~~iPv~~~~--~A~~~al~~~g~~rvgvltp~~~ 157 (273)
T 2xed_A 88 DAAPEVILYACLVA------VMVGGPG--EHHRVESAVAEQLATGGSQALVRSSA--GALVEGLRALDAQRVALVTPYMR 157 (273)
T ss_dssp TTCCSEEEECCHHH------HHTTCTT--HHHHHHHHHHHHHHHTTCCCEEEEHH--HHHHHHHHHTTCCEEEEEECSCH
T ss_pred hcCCCEEEECCChH------HHhcccc--hhHHHHHHHHHHhhccCCCCCEecHH--HHHHHHHHHcCCCeEEEEcCChh
Confidence 46999998876552 1122332 1122233334445 89999853 333444432 21 2333333343
Q ss_pred CCH-HHHHHHHhcCCeEEEeC--CCC-------CCHHHHHHHHHHHHHcCCCcEEEEe-ecCCCCCCCCCCCchhHHHHH
Q 022892 118 RQT-DLLVAAAKTGKIINIKK--GQF-------CASSVMVNSAEKVRLAGNPNVMVCE-RGTMFGYNDLIVDPRNLEWMR 186 (290)
Q Consensus 118 ~n~-~lL~~~a~~~~PVilst--G~~-------~tl~e~~~Ave~i~~~Gn~~i~L~~-~gs~~~y~~~~~dL~~i~~lk 186 (290)
.-. .+.+.+...|..|..-. +.. .+.+++.++++.+... +-+.+++- |+- ++. +..+..++
T Consensus 158 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l~~~-gadaIvLg~CT~---l~~----~~~~~~le 229 (273)
T 2xed_A 158 PLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSLDLS-EVDALVISCAVQ---MPS----LPLVETAE 229 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHSCCT-TCSEEEEESSSS---SCC----TTHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHHhhC-CCCEEEEcCCCC---cch----HHhHHHHH
Confidence 323 33355666777765433 331 1455666666665333 35788888 974 443 23566677
Q ss_pred h-cCCCEEEeCC
Q 022892 187 E-ANCPVVADVT 197 (290)
Q Consensus 187 ~-~~~pV~~D~s 197 (290)
+ +++|| +|+.
T Consensus 230 ~~lg~PV-ids~ 240 (273)
T 2xed_A 230 REFGIPV-LSAA 240 (273)
T ss_dssp HHHSSCE-EEHH
T ss_pred HHhCCCE-EcHH
Confidence 6 89998 6644
No 451
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=62.88 E-value=18 Score=32.05 Aligned_cols=137 Identities=12% Similarity=0.051 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHhhhcce
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVGKVADI 109 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~~~~d~ 109 (290)
-.++|+...+ .|++.+..--.+ . ..++.+++.+++..+|+.. -+-+. +++.+...++.
T Consensus 40 p~~~A~~~~~----~Ga~~l~vvDL~--~-------------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l~Ga~~ 99 (260)
T 2agk_A 40 SSYYAKLYKD----RDVQGCHVIKLG--P-------------NNDDAAREALQESPQFLQVGGGINDT-NCLEWLKWASK 99 (260)
T ss_dssp HHHHHHHHHH----TTCTTCEEEEES--S-------------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHTTTCSC
T ss_pred HHHHHHHHHH----cCCCEEEEEeCC--C-------------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHhcCCCE
Confidence 4677777766 487655443222 1 1245566777777776653 34444 44444466899
Q ss_pred ecccCCccCC-----HHHHHHHHh-cC-C----eEEEe---C-C-------CC----CCHH-HHHHHHHHHHHcCCCcEE
Q 022892 110 IQIPAFLCRQ-----TDLLVAAAK-TG-K----IINIK---K-G-------QF----CASS-VMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 110 ~kIgs~~~~n-----~~lL~~~a~-~~-~----PVils---t-G-------~~----~tl~-e~~~Ave~i~~~Gn~~i~ 162 (290)
+-+||..+.| .++++++.+ .+ . ++=.+ . | -. .++. |+...++ .. . .-+
T Consensus 100 Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~---~~-a-~~i 174 (260)
T 2agk_A 100 VIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELR---KY-T-NEF 174 (260)
T ss_dssp EEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHT---TT-C-SEE
T ss_pred EEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHH---Hh-c-CEE
Confidence 9999999999 999988754 33 2 22222 1 1 10 0222 5554433 33 3 345
Q ss_pred EEeecCCCC-CCCCCCCchhHHHHHh-c----CCCEEEe
Q 022892 163 VCERGTMFG-YNDLIVDPRNLEWMRE-A----NCPVVAD 195 (290)
Q Consensus 163 L~~~gs~~~-y~~~~~dL~~i~~lk~-~----~~pV~~D 195 (290)
++|.-+.-+ +.- .|+..+..+++ . ++||++.
T Consensus 175 l~t~i~~dG~~~G--~d~eli~~l~~~~~~~~~iPVIas 211 (260)
T 2agk_A 175 LIHAADVEGLCGG--IDELLVSKLFEWTKDYDDLKIVYA 211 (260)
T ss_dssp EEEC-------CC--CCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EEEeeccccCcCC--CCHHHHHHHHHhhcccCCceEEEe
Confidence 556655322 221 37788888888 7 9999883
No 452
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=62.87 E-value=69 Score=26.98 Aligned_cols=93 Identities=10% Similarity=0.045 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcc------cHHHHhh-hcceecccCCcc----CCHHHHHHHHhcCCeEEEeCCCCC-
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETV------QCEEVGK-VADIIQIPAFLC----RQTDLLVAAAKTGKIINIKKGQFC- 141 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~------~~~~l~~-~~d~~kIgs~~~----~n~~lL~~~a~~~~PVilstG~~~- 141 (290)
.-+.-+.+.+++.|..+.....+.. .++.+.+ .+|.+-+-+.+. .+.++++.+...+.||++=.....
T Consensus 32 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~ 111 (298)
T 3tb6_A 32 SIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAE 111 (298)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCTT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCcCC
Confidence 3344455666666665554433221 1122222 466666554432 355777778788888776543211
Q ss_pred ---------CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 142 ---------ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 142 ---------tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
..+-...|++++.+.|..+|.++..
T Consensus 112 ~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~ 145 (298)
T 3tb6_A 112 LAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIFK 145 (298)
T ss_dssp CSSCEEEECHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCCEEEeCcHHHHHHHHHHHHHCCCCcEEEEcC
Confidence 2355667788888888888877643
No 453
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=62.82 E-value=70 Score=27.21 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=25.7
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEE
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVT 92 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s 92 (290)
+.++++|++.|-... ++ ...++.+++.+++.||.+.+
T Consensus 30 ~~~~~~G~~~vEl~~--------~~-------~~~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 30 RLAAEAGFGGVEFLF--------PY-------DFDADVIARELKQHNLTQVL 66 (269)
T ss_dssp HHHHHTTCSEEECSC--------CT-------TSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEecC--------Cc-------cCCHHHHHHHHHHcCCcEEE
Confidence 344557999886642 11 12378899999999999876
No 454
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=62.71 E-value=5.3 Score=34.31 Aligned_cols=62 Identities=3% Similarity=0.070 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHcCCCEEeccccccCCCCC-c--ccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 31 HIMRMAKHIKSISTKVGLPLVFKSSFDKANRTS-S--KSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 31 ~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts-~--~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
..++..++.++.|+++|+..|....+ |... + ..++ ...+.|..+.+++++.||.+.-|++++
T Consensus 81 ~~~~~~~~~i~~A~~lG~~~v~~~~~---p~~~~~~~~~~~--~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 145 (281)
T 3u0h_A 81 RELSLLPDRARLCARLGARSVTAFLW---PSMDEEPVRYIS--QLARRIRQVAVELLPLGMRVGLEYVGP 145 (281)
T ss_dssp HHHHTHHHHHHHHHHTTCCEEEEECC---SEESSCHHHHHH--HHHHHHHHHHHHHGGGTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeec---CCCCCcchhhHH--HHHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 45678899999999999998764322 1110 0 0111 013567788888899999999999864
No 455
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=62.64 E-value=30 Score=30.11 Aligned_cols=97 Identities=10% Similarity=0.018 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCC------cEEEeecCcccHHHHhh-
Q 022892 33 MRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDI------PIVTDVHETVQCEEVGK- 105 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi------~~~s~~~d~~~~~~l~~- 105 (290)
.+.+++.++ +|++.+.-..++ ..+.++|++.|+ +++--++.++++....+
T Consensus 75 ~~~a~~ai~----AGA~fivsP~~~-------------------~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~ 131 (217)
T 3lab_A 75 ADDFQKAID----AGAQFIVSPGLT-------------------PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQA 131 (217)
T ss_dssp HHHHHHHHH----HTCSEEEESSCC-------------------HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHT
T ss_pred HHHHHHHHH----cCCCEEEeCCCc-------------------HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHc
Confidence 556666666 599988653222 246688999999 99999999999988777
Q ss_pred hcceecccCCccC-CHHHHHHHHh-c-CCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 022892 106 VADIIQIPAFLCR-QTDLLVAAAK-T-GKIINIKKGQFCASSVMVNSAEKVRLAGN 158 (290)
Q Consensus 106 ~~d~~kIgs~~~~-n~~lL~~~a~-~-~~PVilstG~~~tl~e~~~Ave~i~~~Gn 158 (290)
.+|++|+=-.... ...+|+++.. . +.|++ -+|-- +++ |+.+++. .|+
T Consensus 132 Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~-ptGGI-~~~---N~~~~l~-aGa 181 (217)
T 3lab_A 132 GITQLKCFPASAIGGAKLLKAWSGPFPDIQFC-PTGGI-SKD---NYKEYLG-LPN 181 (217)
T ss_dssp TCCEEEETTTTTTTHHHHHHHHHTTCTTCEEE-EBSSC-CTT---THHHHHH-STT
T ss_pred CCCEEEECccccccCHHHHHHHHhhhcCceEE-EeCCC-CHH---HHHHHHH-CCC
Confidence 6999998655543 4788888865 3 34554 56544 444 4555553 565
No 456
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=62.60 E-value=14 Score=33.72 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCCeEEEEccCCc--cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEE
Q 022892 14 AEPFFLLAGPNVI--ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIV 91 (290)
Q Consensus 14 ~~~~~iIAgpcsi--en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~ 91 (290)
+.+++|||=-.+. +..+..++.|+...+ +|+|+|+-... ...+++++++++..+|++
T Consensus 153 ~~~~~I~ARTDa~~~~gldeai~Ra~ay~~----AGAD~if~~~~-----------------~~~ee~~~~~~~~~~Pl~ 211 (298)
T 3eoo_A 153 DETFVIMARTDAAAAEGIDAAIERAIAYVE----AGADMIFPEAM-----------------KTLDDYRRFKEAVKVPIL 211 (298)
T ss_dssp STTSEEEEEECTHHHHHHHHHHHHHHHHHH----TTCSEEEECCC-----------------CSHHHHHHHHHHHCSCBE
T ss_pred CCCeEEEEeehhhhhcCHHHHHHHHHhhHh----cCCCEEEeCCC-----------------CCHHHHHHHHHHcCCCeE
Confidence 4568888854432 123445555555555 69999986432 135667778888888886
Q ss_pred EeecCc-----ccHHHHhh-hcceecccCCcc
Q 022892 92 TDVHET-----VQCEEVGK-VADIIQIPAFLC 117 (290)
Q Consensus 92 s~~~d~-----~~~~~l~~-~~d~~kIgs~~~ 117 (290)
.-+... ..++.|.+ .+.++-+|....
T Consensus 212 ~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 212 ANLTEFGSTPLFTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp EECCTTSSSCCCCHHHHHHTTCCEEEECSHHH
T ss_pred EEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 644321 23555555 466666555443
No 457
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=62.46 E-value=50 Score=25.27 Aligned_cols=85 Identities=12% Similarity=0.004 Sum_probs=48.4
Q ss_pred HHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEEEeecCCCCCCCCCCCchhHHHHHh--cCCCEEEeCCCCCC
Q 022892 125 AAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQ 201 (290)
Q Consensus 125 ~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~G-n~~i~L~~~gs~~~y~~~~~dL~~i~~lk~--~~~pV~~D~sHs~~ 201 (290)
.+...+..|+-. ..+.++.... +.... .++++|+.... +.. --+..+..+++ .++||++=+++..
T Consensus 55 ~L~~~g~~v~~~---~~~~~~al~~---l~~~~~~~dliilD~~l----~~~-~g~~~~~~lr~~~~~~~ii~ls~~~~- 122 (157)
T 3hzh_A 55 IFTSEGFNIIDT---AADGEEAVIK---YKNHYPNIDIVTLXITM----PKM-DGITCLSNIMEFDKNARVIMISALGK- 122 (157)
T ss_dssp HHHHTTCEEEEE---ESSHHHHHHH---HHHHGGGCCEEEECSSC----SSS-CHHHHHHHHHHHCTTCCEEEEESCCC-
T ss_pred HHHhCCCeEEEE---ECCHHHHHHH---HHhcCCCCCEEEEeccC----CCc-cHHHHHHHHHhhCCCCcEEEEeccCc-
Confidence 345566666411 1245555444 43332 46888887643 110 12345566666 3688877565542
Q ss_pred CCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 202 QPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 202 ~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
......+..+||++ +|.|-+
T Consensus 123 ---------------------~~~~~~~~~~g~~~-~l~KP~ 142 (157)
T 3hzh_A 123 ---------------------EQLVKDCLIKGAKT-FIVKPL 142 (157)
T ss_dssp ---------------------HHHHHHHHHTTCSE-EEESSC
T ss_pred ---------------------HHHHHHHHHcCCCE-EEeCCC
Confidence 45566788999997 566654
No 458
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=62.25 E-value=17 Score=30.70 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=47.9
Q ss_pred HHHHHHHHHhcCCcEEEeecCcccHHHHhh-hcceecccCCcc---------CCHHHHHHHHh-cCCeEEEeCCCCCCHH
Q 022892 76 LKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLC---------RQTDLLVAAAK-TGKIINIKKGQFCASS 144 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~-~~d~~kIgs~~~---------~n~~lL~~~a~-~~~PVilstG~~~tl~ 144 (290)
.+.+++.. . |+.+..++.+++++....+ .+|++-+++.-- ....+++++.+ .+.||+..=|. +.+
T Consensus 101 ~~~~~~~~-~-~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI--~~~ 176 (221)
T 1yad_A 101 PKQIRARF-P-HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM--TPD 176 (221)
T ss_dssp HHHHHHHC-T-TCEEEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC--CGG
T ss_pred HHHHHHHC-C-CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC--CHH
Confidence 34444443 2 8888889998888776655 699999877311 23456776653 57898888776 577
Q ss_pred HHHHHHH
Q 022892 145 VMVNSAE 151 (290)
Q Consensus 145 e~~~Ave 151 (290)
++..+++
T Consensus 177 nv~~~~~ 183 (221)
T 1yad_A 177 RLRDVKQ 183 (221)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
No 459
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=62.13 E-value=19 Score=27.13 Aligned_cols=102 Identities=16% Similarity=0.197 Sum_probs=57.0
Q ss_pred HHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCC
Q 022892 125 AAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQP 203 (290)
Q Consensus 125 ~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~ 203 (290)
.+.+.|.-|.... +.++ |.+.+.....++++|+.... +...-.+..+..+++ .++||++=+++..
T Consensus 24 ~L~~~g~~v~~~~----~~~~---a~~~l~~~~~~dlvi~D~~l----~~~~~g~~~~~~l~~~~~~~ii~ls~~~~--- 89 (140)
T 3h5i_A 24 ILNKYGYTVEIAL----TGEA---AVEKVSGGWYPDLILMDIEL----GEGMDGVQTALAIQQISELPVVFLTAHTE--- 89 (140)
T ss_dssp HHHHTTCEEEEES----SHHH---HHHHHHTTCCCSEEEEESSC----SSSCCHHHHHHHHHHHCCCCEEEEESSSS---
T ss_pred HHHHcCCEEEEec----ChHH---HHHHHhcCCCCCEEEEeccC----CCCCCHHHHHHHHHhCCCCCEEEEECCCC---
Confidence 3455666555322 4444 44445443467899988643 110112445566666 6789887566552
Q ss_pred CCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 022892 204 AGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAK 273 (290)
Q Consensus 204 ~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~ 273 (290)
......+..+||++ +|.|-+ ++++|...++.+.+...
T Consensus 90 -------------------~~~~~~~~~~g~~~-~l~KP~-------------~~~~l~~~i~~~l~~~~ 126 (140)
T 3h5i_A 90 -------------------PAVVEKIRSVTAYG-YVMKSA-------------TEQVLITIVEMALRLYE 126 (140)
T ss_dssp -------------------CCCCGGGGGSCEEE-EEETTC-------------CHHHHHHHHHHHHHHHH
T ss_pred -------------------HHHHHHHHhCCCcE-EEeCCC-------------CHHHHHHHHHHHHHHHH
Confidence 11123456789987 555544 56677777766555443
No 460
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=61.83 E-value=36 Score=31.42 Aligned_cols=91 Identities=18% Similarity=0.073 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-h-cce
Q 022892 34 RMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-V-ADI 109 (290)
Q Consensus 34 e~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~-~d~ 109 (290)
+.+..+.+..+++|++++-...-...+.... ..+.+ ..+..++++++..++|+++. +.+++.++.+.+ . +|+
T Consensus 246 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~--~~~~~--~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~ 321 (363)
T 3l5l_A 246 EESIELARRFKAGGLDLLSVSVGFTIPDTNI--PWGPA--FMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDL 321 (363)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCSSCCCC--CCCTT--TTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcccccccc--CCCcc--hhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccE
Confidence 3344444444557999865432110010000 01111 13556666777789999984 567888877654 4 999
Q ss_pred ecccCCccCCHHHHHHHHh
Q 022892 110 IQIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 110 ~kIgs~~~~n~~lL~~~a~ 128 (290)
+.+|...+.|.+|.+.+..
T Consensus 322 V~iGR~~lanPdl~~k~~~ 340 (363)
T 3l5l_A 322 VSVGRAHLADPHWAYFAAK 340 (363)
T ss_dssp EECCHHHHHCTTHHHHHHH
T ss_pred EEecHHHHhCchHHHHHHH
Confidence 9999999999988877654
No 461
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=61.83 E-value=15 Score=35.58 Aligned_cols=62 Identities=23% Similarity=0.313 Sum_probs=44.9
Q ss_pred CCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCC-CCCCCCChHHHHHHHHH
Q 022892 189 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV-DGPTQWPLRNLEELLEE 267 (290)
Q Consensus 189 ~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~-D~~~sl~p~~l~~lv~~ 267 (290)
++.|++|+-|+. ++ ..+...--.+|++ +++-|..||-..+ .++....|+.|+.+.+.
T Consensus 194 ~lkIvvD~~~Ga---------------~~-----~~~~~il~~lG~~--v~~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~ 251 (485)
T 3uw2_A 194 PLKLVVDAGNGV---------------AG-----PLATRLFKALGCE--LVELFTDIDGNFPNHHPDPAHPENLQDVIAK 251 (485)
T ss_dssp CCCEEEECTTST---------------HH-----HHHHHHHHHTTCC--EEEESCSCCTTCCSSCSCTTSGGGGHHHHHH
T ss_pred CCEEEEEcCCCc---------------HH-----HHHHHHHHHcCCe--EEEecCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence 578999999985 12 3344444579998 7888999998876 55666677888888777
Q ss_pred HHHHH
Q 022892 268 LVAIA 272 (290)
Q Consensus 268 ir~~~ 272 (290)
+++..
T Consensus 252 v~~~~ 256 (485)
T 3uw2_A 252 LKATD 256 (485)
T ss_dssp HHHSS
T ss_pred HHhhC
Confidence 76543
No 462
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=61.61 E-value=49 Score=29.07 Aligned_cols=92 Identities=9% Similarity=-0.060 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcc------cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC----
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETV------QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC---- 141 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~------~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~---- 141 (290)
..-+.-+.+.+++.|..++....+.. .++.+.+ .+|-+-|.+..... ++++.+...+.||++=.....
T Consensus 78 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~ 156 (339)
T 3h5o_A 78 LETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLADDGRC 156 (339)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCCSSSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecCCCCCe
Confidence 35566788899999988876544322 1233333 57877666554443 667778888999886422110
Q ss_pred -----CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 142 -----ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 142 -----tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.+-...|++++.+.|..+|.++.
T Consensus 157 ~V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 185 (339)
T 3h5o_A 157 CVGFSQEDAGAAITRHLLSRGKRRIGFLG 185 (339)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEECHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 345667788999999999988875
No 463
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=61.56 E-value=67 Score=26.40 Aligned_cols=101 Identities=19% Similarity=0.135 Sum_probs=57.8
Q ss_pred HHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc---cc-HHHHhh-hcceeccc-C
Q 022892 41 SISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET---VQ-CEEVGK-VADIIQIP-A 114 (290)
Q Consensus 41 ~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~---~~-~~~l~~-~~d~~kIg-s 114 (290)
+.+.++|++.|....+. + .+.++.+.+.+++.|+++..+..++ .+ ++.+.+ .+|++++. +
T Consensus 71 ~~a~~~Gad~v~vh~~~-------------~-~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~ 136 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSA-------------D-DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAG 136 (207)
T ss_dssp HHHHHTTCSEEEEETTS-------------C-HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHhCCCCEEEEeccC-------------C-hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEec
Confidence 55666899988653221 1 3557788888888899886666633 33 445544 47887432 2
Q ss_pred Cc-------cCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 022892 115 FL-------CRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 162 (290)
Q Consensus 115 ~~-------~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~ 162 (290)
.+ ... ..++++.+.+.||.+-=|.. ++.+..+ ...|..-++
T Consensus 137 ~~~~~~g~~~~~-~~i~~~~~~~~pi~v~GGI~--~~~~~~~----~~aGad~vv 184 (207)
T 3ajx_A 137 LDEQAKPGFDLN-GLLAAGEKARVPFSVAGGVK--VATIPAV----QKAGAEVAV 184 (207)
T ss_dssp HHHHTSTTCCTH-HHHHHHHHHTSCEEEESSCC--GGGHHHH----HHTTCSEEE
T ss_pred ccccccCCCchH-HHHHHhhCCCCCEEEECCcC--HHHHHHH----HHcCCCEEE
Confidence 21 111 55666554467888876654 4433333 235654333
No 464
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=61.30 E-value=65 Score=27.31 Aligned_cols=118 Identities=11% Similarity=-0.033 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe----ecCc-----ccH----HHHh
Q 022892 38 HIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD----VHET-----VQC----EEVG 104 (290)
Q Consensus 38 ~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~----~~d~-----~~~----~~l~ 104 (290)
..++.++++|++.|-..... +.. . . .++.+++.+++.||.+.+. .|++ +.+ +...
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~---------~~~-~-~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~ 94 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREEL---------FAG-P-P-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAE 94 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGG---------CSS-C-C-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEHHh---------cCC-C-H-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHH
Confidence 34555667899987653211 110 1 2 5778999999999987653 2221 122 2222
Q ss_pred h-hcceecccCCccC---CHH-HHHHHHhcCCeEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 022892 105 K-VADIIQIPAFLCR---QTD-LLVAAAKTGKIINIKKGQF---CASSVMVNSAEKVRLAGNPNVMVCERGT 168 (290)
Q Consensus 105 ~-~~d~~kIgs~~~~---n~~-lL~~~a~~~~PVilstG~~---~tl~e~~~Ave~i~~~Gn~~i~L~~~gs 168 (290)
+ .++.+.+.++... ++. +.+.+.+.|..+.+.+-.. .+++++...++.+.+.+.+ +-+|.-.+
T Consensus 95 ~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g 165 (264)
T 1yx1_A 95 ACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIG 165 (264)
T ss_dssp HTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETT
T ss_pred HcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehh
Confidence 2 3666666554432 443 3344556789999998753 2678888777777665655 87777654
No 465
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=61.26 E-value=77 Score=27.27 Aligned_cols=122 Identities=11% Similarity=0.079 Sum_probs=74.4
Q ss_pred HHHHHHhcCCcEEEeecCcccHHH----Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 022892 79 LEKVKIAYDIPIVTDVHETVQCEE----VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 153 (290)
Q Consensus 79 L~~~~~~~Gi~~~s~~~d~~~~~~----l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i 153 (290)
+.+...+.+|--+....+.+.+-. +.+ .++++++.-.+..-.++++++++.-..+.+--|+-.+.+++..|++
T Consensus 19 ~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~-- 96 (225)
T 1mxs_A 19 IDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEA-- 96 (225)
T ss_dssp HHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHH--
T ss_pred HHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHH--
Confidence 444456677777766667664433 333 4999999877666667777666543345555555557788887765
Q ss_pred HHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHhcCCCEEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 022892 154 RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 233 (290)
Q Consensus 154 ~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G 233 (290)
.|-+-+| .+. .|+..+..-++.+.+++. .-|+ +.-+..|..+|
T Consensus 97 --aGAd~v~---~p~--------~d~~v~~~~~~~g~~~i~-G~~t-----------------------~~e~~~A~~~G 139 (225)
T 1mxs_A 97 --AGAQFVV---TPG--------ITEDILEAGVDSEIPLLP-GIST-----------------------PSEIMMGYALG 139 (225)
T ss_dssp --HTCSSEE---CSS--------CCHHHHHHHHHCSSCEEC-EECS-----------------------HHHHHHHHTTT
T ss_pred --CCCCEEE---eCC--------CCHHHHHHHHHhCCCEEE-eeCC-----------------------HHHHHHHHHCC
Confidence 4655554 221 255555555557887654 2344 33356788999
Q ss_pred CCEEEE
Q 022892 234 VDGVFM 239 (290)
Q Consensus 234 A~G~~I 239 (290)
||=+-+
T Consensus 140 ad~vk~ 145 (225)
T 1mxs_A 140 YRRFKL 145 (225)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 994333
No 466
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=61.18 E-value=48 Score=24.61 Aligned_cols=102 Identities=12% Similarity=0.068 Sum_probs=59.7
Q ss_pred HHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCCcEEEEeecCCCCCCCCCCCchhHHHHHh--cCCCEEEeCCCCCC
Q 022892 125 AAAKTGKIINIKKGQFCASSVMVNSAEKVRL-AGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQ 201 (290)
Q Consensus 125 ~~a~~~~PVilstG~~~tl~e~~~Ave~i~~-~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~--~~~pV~~D~sHs~~ 201 (290)
.+...+.-|...+ +.++.. +.+.. ...++++|+.... +.. -.+..+..+++ .++||++=+++..
T Consensus 22 ~l~~~g~~v~~~~----~~~~a~---~~~~~~~~~~dlvi~d~~l----~~~-~g~~~~~~l~~~~~~~~ii~ls~~~~- 88 (143)
T 3jte_A 22 LLEIDGNEVLTAS----SSTEGL---RIFTENCNSIDVVITDMKM----PKL-SGMDILREIKKITPHMAVIILTGHGD- 88 (143)
T ss_dssp HHHHTTCEEEEES----SHHHHH---HHHHHTTTTCCEEEEESCC----SSS-CHHHHHHHHHHHCTTCEEEEEECTTC-
T ss_pred HHHhCCceEEEeC----CHHHHH---HHHHhCCCCCCEEEEeCCC----CCC-cHHHHHHHHHHhCCCCeEEEEECCCC-
Confidence 3455666554322 444444 44443 3467899887643 110 12345566666 3688877566552
Q ss_pred CCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 022892 202 QPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 274 (290)
Q Consensus 202 ~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~~~~~ 274 (290)
......+...||++ +|.|-+ ++++|...++.+.+-...
T Consensus 89 ---------------------~~~~~~~~~~g~~~-~l~kp~-------------~~~~l~~~l~~~~~~~~~ 126 (143)
T 3jte_A 89 ---------------------LDNAILAMKEGAFE-YLRKPV-------------TAQDLSIAINNAINRKKL 126 (143)
T ss_dssp ---------------------HHHHHHHHHTTCSE-EEESSC-------------CHHHHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHhCcce-eEeCCC-------------CHHHHHHHHHHHHHHHHH
Confidence 45566788999997 566654 566777776665554443
No 467
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=60.75 E-value=1.1e+02 Score=28.75 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeec---------CcccHHHHhh
Q 022892 35 MAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVH---------ETVQCEEVGK 105 (290)
Q Consensus 35 ~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~---------d~~~~~~l~~ 105 (290)
.-++.++.|++.|+.-||-.-.. |-..+ ....+.+++|.++|+++|+.++.++- +...+.++.+
T Consensus 18 ~~~~yi~~a~~~Gf~~IFTSL~~--~e~~~-----~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~ 90 (372)
T 2p0o_A 18 DTIIYIKKMKALGFDGIFTSLHI--PEDDT-----SLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIE 90 (372)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECC--C----------CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEccCCc--cCCCh-----HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHH
Confidence 33466677778899988654322 11111 11247799999999999999999884 2345555555
Q ss_pred -hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC-CcEEEEeecCCCCCCCC--CCCchh
Q 022892 106 -VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN-PNVMVCERGTMFGYNDL--IVDPRN 181 (290)
Q Consensus 106 -~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn-~~i~L~~~gs~~~y~~~--~~dL~~ 181 (290)
.++.+-+--+- +......+++. .+|-|--.+- +.+++.+..+ ...| .++.-||- | ||.. =+++.-
T Consensus 91 lGi~glRLD~Gf--~~~eia~ls~n-lkIeLNASti-~~~~l~~l~~---~~~n~~~l~a~HN---F-YPr~~TGLs~~~ 159 (372)
T 2p0o_A 91 LGVTGLRMDYGI--TIEQMAHASHK-IDIGLNASTI-TLEEVAELKA---HQADFSRLEAWHN---Y-YPRPETGIGTTF 159 (372)
T ss_dssp HTCCEEEECSSC--CHHHHHHHHTT-SEEEEETTTC-CHHHHHHHHH---TTCCGGGEEEECC---C-CCSTTCSBCHHH
T ss_pred cCCCEEEEcCCC--CHHHHHHHhcC-CEEEEECccC-CHHHHHHHHH---cCCChHHeEEeec---c-CCCCCCCCCHHH
Confidence 45555554443 33333445554 6666654443 6777776433 2223 46888884 2 4442 133322
Q ss_pred ----HHHHHhcCCCEEE
Q 022892 182 ----LEWMREANCPVVA 194 (290)
Q Consensus 182 ----i~~lk~~~~pV~~ 194 (290)
-.++|++|++|..
T Consensus 160 f~~~n~~~k~~Gi~t~A 176 (372)
T 2p0o_A 160 FNEKNRWLKELGLQVFT 176 (372)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCcEEE
Confidence 2334557887643
No 468
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=60.64 E-value=36 Score=28.56 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHcCCCEEe
Q 022892 32 IMRMAKHIKSISTKVGLPLVF 52 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~ 52 (290)
..++.+.+.+.+++.|...+.
T Consensus 18 ~~~~~~gi~~~~~~~g~~~~~ 38 (275)
T 3d8u_A 18 CAHFLPSFQQALNKAGYQLLL 38 (275)
T ss_dssp HHHHHHHHHHHHHHTSCEECC
T ss_pred HHHHHHHHHHHHHHCCCEEEE
Confidence 345566666666666655443
No 469
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=60.60 E-value=14 Score=31.84 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=36.1
Q ss_pred HHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 022892 120 TDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 169 (290)
Q Consensus 120 ~~lL~~~a~~-~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~ 169 (290)
.++++.+.+. ++||++-++.....+......+.+.+..+.+++++|+|..
T Consensus 133 ~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~l~iv~~H~G~~ 183 (272)
T 3cjp_A 133 KPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGGS 183 (272)
T ss_dssp HHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGGG
T ss_pred HHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCCCceEEEECCCCc
Confidence 4778888998 9999999986433344445555666655567999999873
No 470
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=60.54 E-value=78 Score=29.49 Aligned_cols=23 Identities=13% Similarity=0.163 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEE
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLV 51 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V 51 (290)
..+....+..++.+|++++++++
T Consensus 69 v~g~~~~a~~v~~~A~~~~VPVa 91 (349)
T 3elf_A 69 VTGAVALAEFTHVIAAKYPVNVA 91 (349)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCEE
T ss_pred hhhHHHHHHHHHHHHHHCCCCEE
Confidence 34556666777777777776653
No 471
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=60.51 E-value=19 Score=34.72 Aligned_cols=83 Identities=19% Similarity=0.072 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhcCCcEEEeecCcccHHHHhhhcc----eecccCCcc--CCHHHHHHHHhcC--CeEEEeCCCCCCHHH
Q 022892 74 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVAD----IIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSV 145 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~~d----~~kIgs~~~--~n~~lL~~~a~~~--~PVilstG~~~tl~e 145 (290)
+-++.+++.+++++|.++=+|+++++.+-+..+.. -++|.+.+. +|..-++.+-..+ --|.+|-...+++.|
T Consensus 293 eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTe 372 (449)
T 3uj2_A 293 ELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSE 372 (449)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHH
T ss_pred HHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHH
Confidence 44566777789999999999999988876654211 123322332 2443333332211 235555555555555
Q ss_pred HHHHHHHHHHc
Q 022892 146 MVNSAEKVRLA 156 (290)
Q Consensus 146 ~~~Ave~i~~~ 156 (290)
++.+++..+..
T Consensus 373 a~kia~lA~~~ 383 (449)
T 3uj2_A 373 TLEAIKMAHKA 383 (449)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 55555554444
No 472
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=60.50 E-value=72 Score=27.13 Aligned_cols=59 Identities=7% Similarity=-0.023 Sum_probs=34.0
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC----------CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----------ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----------tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
.+|.+-+.+.+.. .+.++.+...+.||++=..... +.+-...|++++.+.|..+|.++.
T Consensus 72 ~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~ 140 (289)
T 2fep_A 72 QVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFVS 140 (289)
T ss_dssp TCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCCCTTCCSCEEECCHHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccccCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4665555443332 3455666667777665332110 234566677888888877877764
No 473
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=60.21 E-value=74 Score=27.16 Aligned_cols=59 Identities=7% Similarity=-0.080 Sum_probs=35.8
Q ss_pred hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC------------CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 106 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------------ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 106 ~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~------------tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
.+|-+-+.+..... ++++.+...+.||++=..... +..-...|++++.+.|..+|.++.
T Consensus 68 ~vdGiI~~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 138 (295)
T 3hcw_A 68 MVDAFILLYSKEND-PIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIFIT 138 (295)
T ss_dssp CCSEEEESCCCTTC-HHHHHHHHTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred CcCEEEEcCcccCh-HHHHHHHhCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcCCccEEEEc
Confidence 46655554433333 556667777888766432211 234566778888888888877765
No 474
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=59.99 E-value=21 Score=30.82 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEe--ecCcccHHHHhh-hcc
Q 022892 32 IMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTD--VHETVQCEEVGK-VAD 108 (290)
Q Consensus 32 ~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~--~~d~~~~~~l~~-~~d 108 (290)
..+.|+++.+ +|++.|.....+ ....+.+.. +..++++++..++|+++. +.+++++..+.+ .++
T Consensus 158 ~~e~~~~~~~----~G~~~i~~t~~~-----~~g~~~g~~----~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gad 224 (266)
T 2w6r_A 158 LRDWVVEVEK----RGAGEILLTSID-----RDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD 224 (266)
T ss_dssp HHHHHHHHHH----TTCSEEEEEETT-----TTTTCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHH----cCCCEEEEEeec-----CCCCcCCCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCH
Confidence 4566666554 699988764332 112233332 667777777789999984 677777777766 699
Q ss_pred eecccCCccCCHHHHHH
Q 022892 109 IIQIPAFLCRQTDLLVA 125 (290)
Q Consensus 109 ~~kIgs~~~~n~~lL~~ 125 (290)
.+.||+..+.+...+++
T Consensus 225 gv~vgsal~~~~~~~~~ 241 (266)
T 2w6r_A 225 AALAASVFHFREIDMRE 241 (266)
T ss_dssp EEEESTTTC--------
T ss_pred HHHccHHHHcCCCCHHH
Confidence 99999998877643333
No 475
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=59.62 E-value=81 Score=26.73 Aligned_cols=91 Identities=7% Similarity=-0.088 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcCCcEEEeec--Ccc----cHHHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC-----
Q 022892 74 EGLKILEKVKIAYDIPIVTDVH--ETV----QCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----- 141 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s~~~--d~~----~~~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----- 141 (290)
.-+.-+.+.+++.|..+..... |+. .++.+.+ .+|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~ 103 (287)
T 3bbl_A 25 QFLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND-PRVQFLLKQKFPFVAFGRSNPDWDFA 103 (287)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC-HHHHHHHHTTCCEEEESCCSTTCCCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc-HHHHHHHhcCCCEEEECCcCCCCCCC
Confidence 3455566666777766544221 211 1233332 47766665544444 556667677888766432210
Q ss_pred -----CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 142 -----ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 142 -----tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.+-...|++++.+.|..+|.++.
T Consensus 104 ~V~~D~~~~g~~a~~~L~~~G~~~I~~i~ 132 (287)
T 3bbl_A 104 WVDIDGTAGTRQAVEYLIGRGHRRIAILA 132 (287)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred EEEeccHHHHHHHHHHHHHCCCCeEEEEe
Confidence 234456677888888888877764
No 476
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=59.60 E-value=39 Score=25.93 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=0.0
Q ss_pred hhhcCCCCeEEEEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCC----CCChhHHHHHHHHHHH
Q 022892 9 NQLKAAEPFFLLAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFR----GPGMVEGLKILEKVKI 84 (290)
Q Consensus 9 ~~i~~~~~~~iIAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~----g~~~~~~l~~L~~~~~ 84 (290)
..+.+.-+.+++++-|. ...+ +++++++.|++.|.++-....=...-......|+ |+.+.--++.+++.+.
T Consensus 1 ~~~~~~mkIlL~C~aGm----STsl-lv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~ 75 (108)
T 3nbm_A 1 SNASKELKVLVLCAGSG----TSAQ-LANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAE 75 (108)
T ss_dssp ----CCEEEEEEESSSS----HHHH-HHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHT
T ss_pred CCcccCceEEEECCCCC----CHHH-HHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhh
Q ss_pred hcCCcEEE
Q 022892 85 AYDIPIVT 92 (290)
Q Consensus 85 ~~Gi~~~s 92 (290)
+.|+|+..
T Consensus 76 ~~~ipV~v 83 (108)
T 3nbm_A 76 RLGIQIVA 83 (108)
T ss_dssp TTTCEEEE
T ss_pred hcCCcEEE
No 477
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=59.55 E-value=1.3e+02 Score=29.05 Aligned_cols=175 Identities=17% Similarity=0.146 Sum_probs=102.9
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCcEEEeecCc-------ccHHHHhh----hcceec----ccCCccCC-HHHH------
Q 022892 66 SFRGPGMVEGLKILEKVKIAYDIPIVTDVHET-------VQCEEVGK----VADIIQ----IPAFLCRQ-TDLL------ 123 (290)
Q Consensus 66 ~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~-------~~~~~l~~----~~d~~k----Igs~~~~n-~~lL------ 123 (290)
.|+|+. .|+.-+++.....|=|++-++.-| +-.+.+.+ .+|++| +++-.... .+.+
T Consensus 164 ~F~GP~--~GI~g~R~~l~~~~RPllgtiiKPklGLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~ea 241 (452)
T 2qyg_A 164 AFDGPR--FGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDA 241 (452)
T ss_dssp TSCCCS--SHHHHHHHHHTCCSSCEEEEECSSCTTCCSHHHHHHHHHHHHHTCSEEECCTTCCSCTTSCHHHHHHHHHHH
T ss_pred cCCCCC--CChHHHHHHhCCCCCceEeeecCCcCCCCHHHHHHHHHHHHhCCCCcccCCccCCCCCCCcHHHHHHHHHHH
Confidence 366664 678888999999999999999888 22222222 489988 44332211 1111
Q ss_pred --HHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCC-CC
Q 022892 124 --VAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVT-HS 199 (290)
Q Consensus 124 --~~~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~s-Hs 199 (290)
++-+.||...+..-+..++.+||..=++++++.|.+ ++++.....+ +.++..|++ .++|+-+=.. |+
T Consensus 242 i~ra~~eTGe~k~y~~NiT~~~~eM~~Ra~~a~e~G~~--~vmvd~~~~G-------~~a~~~la~~~~l~lh~HrA~hg 312 (452)
T 2qyg_A 242 CRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAG--ALLINAMPVG-------LSAVRMLRKHATVPLIAHFPFIA 312 (452)
T ss_dssp HHHHHHHHSSCCEEEEECCCCTTHHHHHHHHHHHTTCC--EEEEEHHHHC-------HHHHHHHHTTCCSCEEEECTTHH
T ss_pred HHHHHHHhCCcceecCcCCCCHHHHHHHHHHHHHhCCC--eEEEeccccC-------hHHHHHHHhcCCCeEEEccCcce
Confidence 333467876666544445999999999999998874 4444433222 357778877 7888765100 11
Q ss_pred CCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022892 200 LQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 270 (290)
Q Consensus 200 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t~dka~~D~~~sl~p~~l~~lv~~ir~ 270 (290)
.-.+ +..-|.. ...+++..-..|+|++..=.. -++...++++...+++.+|.
T Consensus 313 a~~r---------~~~~Gi~--~~vl~Kl~RLaGaD~ih~gt~--------~GKleg~~~~~~~~~~~lr~ 364 (452)
T 2qyg_A 313 AFSR---------LANYGIH--SRVMTRLQRLAGFDVVIMPGF--------GPRMMTPEHEVLDCIRACLE 364 (452)
T ss_dssp HHHS---------CTTSEEC--HHHHHHHHHHHTCSEEEECCS--------SGGGCCCHHHHHHHHHHHHS
T ss_pred eccC---------CCCCCCc--HHHHHHHHHHcCCCeeecCCc--------CCCcCCCHHHHHHHHHHHHh
Confidence 0000 0001211 223355556679997644322 36666677777666665554
No 478
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=59.55 E-value=12 Score=34.16 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCCCchhHHHHHh---cCCCEEEeCCCC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNLEWMRE---ANCPVVADVTHS 199 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~----~~~dL~~i~~lk~---~~~pV~~D~sHs 199 (290)
+.+++.+-++...+.|.+=|=+.=..+.++.+. ++++ +.++.++. .++||.+|+.+.
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~-Rv~pvI~~l~~~~vpiSIDT~~~ 113 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKR-RLLPVLEAVLSLGVPVSVDTRKP 113 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHH-HHHHHHHHHHTTCSCEEEECSCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHHhCCCeEEEECCCH
Confidence 556666555666667764333322222222221 2233 45555554 278898887763
No 479
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=59.53 E-value=54 Score=31.31 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHh-----cCCcEEEeecCcccH--
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIA-----YDIPIVTDVHETVQC-- 100 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~-----~Gi~~~s~~~d~~~~-- 100 (290)
|.++.++..++|.+ +|+++|+...-+ .+..+.|.+.+++ ..+|++.++|--..+
T Consensus 36 Dv~aTv~QI~~L~~----aG~eiVRvaVp~---------------~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al 96 (406)
T 4g9p_A 36 DVEATTAQVLELHR----AGSEIVRLTVND---------------EEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLL 96 (406)
T ss_dssp CHHHHHHHHHHHHH----HTCSEEEEECCS---------------HHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHH
T ss_pred cHHHHHHHHHHHHH----cCCCEEEEecCC---------------HHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHH
Confidence 56667777777766 599999875322 2444444444443 789999999865332
Q ss_pred ---HHHhhhcceecccCCccCC--------HHHHHHHHhcCCeEEEeCC
Q 022892 101 ---EEVGKVADIIQIPAFLCRQ--------TDLLVAAAKTGKIINIKKG 138 (290)
Q Consensus 101 ---~~l~~~~d~~kIgs~~~~n--------~~lL~~~a~~~~PVilstG 138 (290)
+..++.+|-+-|-.+++-+ .++++.+-..++||=+=..
T Consensus 97 ~a~~~~a~~~dkiRINPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN 145 (406)
T 4g9p_A 97 RKYPKMAEALDKFRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGAN 145 (406)
T ss_dssp HHCHHHHHHCSEEEECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhHHhhcccCccccCccccHHHHHHHHHHHHHHccCCceeccc
Confidence 3455678999998888853 2466767778888655443
No 480
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=59.44 E-value=80 Score=27.68 Aligned_cols=131 Identities=11% Similarity=0.009 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHcCCCEE-eccccccCCCCCcc-----cCCCCChhHHHHHHHHHHHhcCCcEEEeecC--ccc----H
Q 022892 33 MRMAKHIKSISTKVGLPLV-FKSSFDKANRTSSK-----SFRGPGMVEGLKILEKVKIAYDIPIVTDVHE--TVQ----C 100 (290)
Q Consensus 33 le~Ak~L~~~a~~~G~~~V-~~~~~~k~~rts~~-----~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d--~~~----~ 100 (290)
-++.+++.++++++|-.-= ....... .++..- .....-...-+.-+.+.+++.|..++....+ ++. +
T Consensus 39 ~~tr~rV~~~~~~lgY~pn~~a~~l~~-~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i 117 (344)
T 3kjx_A 39 DATRARVLAAAKELGYVPNKIAGALAS-NRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVL 117 (344)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCCSCSTT-SCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHhhc-CCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHH
Confidence 4677888888888883210 0011110 111000 0111111355667888999999988764443 221 2
Q ss_pred HHHhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC----------CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 101 EEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----------ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 101 ~~l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~----------tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.+.+ .+|-+-+.+... +.+.++.+...+.||++=..... +.+-...|++++.+.|..+|.++.
T Consensus 118 ~~l~~~~vdGiIi~~~~~-~~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 192 (344)
T 3kjx_A 118 YEMLSWRPSGVIIAGLEH-SEAARAMLDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGFMG 192 (344)
T ss_dssp HHHHTTCCSEEEEECSCC-CHHHHHHHHHCSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCCSCCEEE
T ss_pred HHHHhCCCCEEEEECCCC-CHHHHHHHHhCCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEe
Confidence 22323 578777765443 34677888889999886511100 235667788899999998888774
No 481
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=59.43 E-value=23 Score=33.33 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcCCcEEE-eecCcccHHHHhh-hcceecccCC---c----cCCHHHHHHHHh-c--CCeEEEeCCCCCCH
Q 022892 76 LKILEKVKIAYDIPIVT-DVHETVQCEEVGK-VADIIQIPAF---L----CRQTDLLVAAAK-T--GKIINIKKGQFCAS 143 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s-~~~d~~~~~~l~~-~~d~~kIgs~---~----~~n~~lL~~~a~-~--~~PVilstG~~~tl 143 (290)
++.++++++..++|++. .+.+++.+..+.+ .+|++.|... . ....+.|.++.+ . +.||+.+-|.. +.
T Consensus 241 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~-~g 319 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVR-KG 319 (392)
T ss_dssp HHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCC-SH
T ss_pred HHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCC-CH
Confidence 55677777788999988 6788888888877 6999998432 1 234455655543 2 58999999999 99
Q ss_pred HHHHHHHH
Q 022892 144 SVMVNSAE 151 (290)
Q Consensus 144 ~e~~~Ave 151 (290)
+++..|+.
T Consensus 320 ~Dv~kala 327 (392)
T 2nzl_A 320 TDVLKALA 327 (392)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998865
No 482
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=59.37 E-value=1.2e+02 Score=28.65 Aligned_cols=92 Identities=13% Similarity=-0.035 Sum_probs=56.5
Q ss_pred CCeEEEeCCC--------CCCHHHHHHHHHHHHH-cCCCcEEEEeecCC---C--CCCCCCCCchhHHHHHh-c--CCCE
Q 022892 130 GKIINIKKGQ--------FCASSVMVNSAEKVRL-AGNPNVMVCERGTM---F--GYNDLIVDPRNLEWMRE-A--NCPV 192 (290)
Q Consensus 130 ~~PVilstG~--------~~tl~e~~~Ave~i~~-~Gn~~i~L~~~gs~---~--~y~~~~~dL~~i~~lk~-~--~~pV 192 (290)
+.||.++-.. ..+++|....++.+.. .|-.-|++..++.. + .+.....+...+..+|+ + .+||
T Consensus 242 ~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPV 321 (419)
T 3l5a_A 242 NFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPL 321 (419)
T ss_dssp TCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCE
T ss_pred CeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeE
Confidence 4566665443 2378999999999988 88777776554320 1 11111124455677777 5 5899
Q ss_pred EEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeCC
Q 022892 193 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 244 (290)
Q Consensus 193 ~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~t 244 (290)
+....-. . +..+..+++. ||++++=+-+-
T Consensus 322 I~~GgI~-----------------t-----~e~Ae~~L~~-aDlVaiGR~~I 350 (419)
T 3l5a_A 322 IASGGIN-----------------S-----PESALDALQH-ADMVGMSSPFV 350 (419)
T ss_dssp EECSSCC-----------------S-----HHHHHHHGGG-CSEEEESTHHH
T ss_pred EEECCCC-----------------C-----HHHHHHHHHh-CCcHHHHHHHH
Confidence 8722211 1 5567777877 99888877653
No 483
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=59.00 E-value=47 Score=29.12 Aligned_cols=74 Identities=11% Similarity=0.012 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcCCcEEE--ee-cCcccHHHHhhh-cceecc-------cCCccCC----HHHHHHHHh-cCCeEEEeC
Q 022892 74 EGLKILEKVKIAYDIPIVT--DV-HETVQCEEVGKV-ADIIQI-------PAFLCRQ----TDLLVAAAK-TGKIINIKK 137 (290)
Q Consensus 74 ~~l~~L~~~~~~~Gi~~~s--~~-~d~~~~~~l~~~-~d~~kI-------gs~~~~n----~~lL~~~a~-~~~PVilst 137 (290)
+....+.+.++++|+.++. ++ .+.+.+..+.+. ..++.. |++.-.. .++++.+.+ ++.||.+--
T Consensus 134 ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~ 213 (262)
T 2ekc_A 134 EEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGF 213 (262)
T ss_dssp HHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEES
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeC
Confidence 4577888999999976432 33 222344444442 223222 2222111 145566544 478999999
Q ss_pred CCCCCHHHHHH
Q 022892 138 GQFCASSVMVN 148 (290)
Q Consensus 138 G~~~tl~e~~~ 148 (290)
|.+ |.+.+..
T Consensus 214 GI~-t~e~~~~ 223 (262)
T 2ekc_A 214 GVS-KKEHARE 223 (262)
T ss_dssp SCC-SHHHHHH
T ss_pred CCC-CHHHHHH
Confidence 988 8888776
No 484
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=58.98 E-value=44 Score=28.50 Aligned_cols=45 Identities=7% Similarity=-0.002 Sum_probs=24.1
Q ss_pred HHHHHHHhcCCeEEEeCCCCC----------CHHHHHHHHHHHHHcCCCcEEEEe
Q 022892 121 DLLVAAAKTGKIINIKKGQFC----------ASSVMVNSAEKVRLAGNPNVMVCE 165 (290)
Q Consensus 121 ~lL~~~a~~~~PVilstG~~~----------tl~e~~~Ave~i~~~Gn~~i~L~~ 165 (290)
+.++.+.+.+.||++=..... +.+-...|++++.+.|..+|.++-
T Consensus 80 ~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~ 134 (288)
T 3gv0_A 80 PRVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIV 134 (288)
T ss_dssp HHHHHHHHTTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHhhCCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCCCCeEEEEc
Confidence 344555555666554322110 234455667777777776666653
No 485
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=58.65 E-value=1.1e+02 Score=28.25 Aligned_cols=85 Identities=9% Similarity=-0.069 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHhcCCcEEEeecCcccHHHHhhh---cceecccCCccCCHHHHHHHHhcCC--eEEEeCCCCCCHHHH
Q 022892 72 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV---ADIIQIPAFLCRQTDLLVAAAKTGK--IINIKKGQFCASSVM 146 (290)
Q Consensus 72 ~~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~~~---~d~~kIgs~~~~n~~lL~~~a~~~~--PVilstG~~~tl~e~ 146 (290)
.++.++.+++ ++++|+.++-+|+.+.+.+.+.++ +++--++...+.+..-++.+-..+. =|.+|-...+.+.|+
T Consensus 212 ~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 290 (392)
T 2poz_A 212 TDETIRFCRK-IGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLMET 290 (392)
T ss_dssp HHHHHHHHHH-HGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHH
T ss_pred HHHHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHH
Confidence 3444455444 688999999988877666655432 2221112222233333333322221 344555555555555
Q ss_pred HHHHHHHHHcC
Q 022892 147 VNSAEKVRLAG 157 (290)
Q Consensus 147 ~~Ave~i~~~G 157 (290)
+.++...++.|
T Consensus 291 ~~i~~~A~~~g 301 (392)
T 2poz_A 291 KKICAMAEAYN 301 (392)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHcC
Confidence 55555554443
No 486
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=58.64 E-value=1.1e+02 Score=28.09 Aligned_cols=22 Identities=9% Similarity=-0.041 Sum_probs=14.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEec
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFK 53 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~ 53 (290)
+.+...+.|+++++ .|++.+|.
T Consensus 165 ~~~~~~~~a~~~~~----~Gf~~iKi 186 (392)
T 1tzz_A 165 GLSMLRGEMRGYLD----RGYNVVKM 186 (392)
T ss_dssp CHHHHHHHHHHHHT----TTCSEEEE
T ss_pred CHHHHHHHHHHHHH----cCCCEEEE
Confidence 45555666666554 59998874
No 487
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=58.50 E-value=14 Score=31.97 Aligned_cols=67 Identities=10% Similarity=0.101 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEecc-ccccCCCCCcc---cCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKS-SFDKANRTSSK---SFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~-~~~k~~rts~~---~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
.+..++..++.++.|+++|+..|... .+..-.+..+. .++. +.+.|..+.+++++.||.+.-++++.
T Consensus 99 r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lE~~~~ 169 (287)
T 3kws_A 99 RKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDF--LCEQFNEMGTFAAQHGTSVIFEPLNR 169 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHH--HHHHHHHHHHHHHHTTCCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHH--HHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 35678899999999999999976542 22210000010 0110 13667888899999999999998864
No 488
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=58.32 E-value=64 Score=27.47 Aligned_cols=89 Identities=7% Similarity=-0.028 Sum_probs=46.3
Q ss_pred HHHHHHHHHhcCCcEEEeec--CcccHHH---Hhh-hcceecccCCccCCHHHHHHHHhcCCeEEEeCCCCC--------
Q 022892 76 LKILEKVKIAYDIPIVTDVH--ETVQCEE---VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-------- 141 (290)
Q Consensus 76 l~~L~~~~~~~Gi~~~s~~~--d~~~~~~---l~~-~~d~~kIgs~~~~n~~lL~~~a~~~~PVilstG~~~-------- 141 (290)
+.-+.+.+++.|..++.... +.++.+. +.+ .+|-+-+.+.+... +.++.+.+ +.||++=.....
T Consensus 30 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~~~~~~~~~V~ 107 (289)
T 3k9c_A 30 VEQIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARASGLPGVGAVR 107 (289)
T ss_dssp HHHHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSCCSSTTSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCCCCCCCCCEEE
Confidence 44455555666654443222 1112222 222 36665555544433 55666655 777665433210
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 022892 142 --ASSVMVNSAEKVRLAGNPNVMVCER 166 (290)
Q Consensus 142 --tl~e~~~Ave~i~~~Gn~~i~L~~~ 166 (290)
+.+-...|++++.+.|..+|.++..
T Consensus 108 ~D~~~~~~~a~~~L~~~G~~~I~~i~~ 134 (289)
T 3k9c_A 108 GDDVAGITLAVDHLTELGHRNIAHIDG 134 (289)
T ss_dssp ECHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred eChHHHHHHHHHHHHHCCCCcEEEEeC
Confidence 2345566777888888777777643
No 489
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=58.19 E-value=7.4 Score=33.25 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCC---cccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTS---SKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts---~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
.+..++..++.++.|+++|+..|....-.. |... ...++ .+.+.+..+.+++++.||.+.-+++++
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~-~~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~l~lE~~~~ 146 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGL-PGGSKNIDAARR--MVVEGIAAVLPHARAAGVPLAIEPLHP 146 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCC-CTTCCCHHHHHH--HHHHHHHHHHHHHHHHTCCEEECCCCG
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCC-CCCCcCHHHHHH--HHHHHHHHHHHHHHHcCCEEEEeECCC
Confidence 456789999999999999998765532110 1100 00111 013667888899999999999998754
No 490
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=57.87 E-value=52 Score=28.18 Aligned_cols=112 Identities=12% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEeccccccCCCCCcccCCCCChhHHHHHHHHHHHhcCCcEEEeecC---------------cccHH
Q 022892 37 KHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGPGMVEGLKILEKVKIAYDIPIVTDVHE---------------TVQCE 101 (290)
Q Consensus 37 k~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d---------------~~~~~ 101 (290)
...++.++++|++.|-...+. . .++.+++.+++.||.+.+-.+. ...++
T Consensus 34 ~~~l~~~~~~G~~~vEl~~~~---------------~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 97 (301)
T 3cny_A 34 QQLLSDIVVAGFQGTEVGGFF---------------P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQ 97 (301)
T ss_dssp HHHHHHHHHHTCCEECCCTTC---------------C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEecCCC---------------C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHH
Q ss_pred HHhh-hcceecccC------CccCC---------------------HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 022892 102 EVGK-VADIIQIPA------FLCRQ---------------------TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 153 (290)
Q Consensus 102 ~l~~-~~d~~kIgs------~~~~n---------------------~~lL~~~a~~~~PVilstG~~~tl~e~~~Ave~i 153 (290)
.+.+ .++.+.+.+ +.... ..+.+.+.+.|..+.+.+-...-+.....+.+.+
T Consensus 98 ~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~l~ 177 (301)
T 3cny_A 98 YLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLM 177 (301)
T ss_dssp HHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHH
T ss_pred HHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHHHHH
Q ss_pred HHcCCCcEEEE
Q 022892 154 RLAGNPNVMVC 164 (290)
Q Consensus 154 ~~~Gn~~i~L~ 164 (290)
...+.+++-+|
T Consensus 178 ~~~~~~~vg~~ 188 (301)
T 3cny_A 178 ANTDPKLVGLL 188 (301)
T ss_dssp HTSCTTTCEEE
T ss_pred HhCCccceeEE
No 491
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=57.80 E-value=1.2e+02 Score=28.32 Aligned_cols=78 Identities=13% Similarity=0.014 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcC------CCcEEEEeecCCCC-CCCC------C-CCchhHHHHHh-cCCCEEEeCCCCCCCCCCC
Q 022892 142 ASSVMVNSAEKVRLAG------NPNVMVCERGTMFG-YNDL------I-VDPRNLEWMRE-ANCPVVADVTHSLQQPAGK 206 (290)
Q Consensus 142 tl~e~~~Ave~i~~~G------n~~i~L~~~gs~~~-y~~~------~-~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~ 206 (290)
+++++...++.+...| -.-|++.. ++... +... . .++..+..+|+ .++||+....-+
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~------- 329 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQ-PRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYT------- 329 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEEC-CCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCC-------
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEec-CccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCC-------
Confidence 4677777777777777 44455543 32111 1001 0 13445666777 889998732221
Q ss_pred ccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeC
Q 022892 207 KLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 243 (290)
Q Consensus 207 ~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~ 243 (290)
+..+..+++.| ||++++=+-+
T Consensus 330 ----------------~~~a~~~l~~g~aD~V~igR~~ 351 (402)
T 2hsa_B 330 ----------------RELGIEAVAQGDADLVSYGRLF 351 (402)
T ss_dssp ----------------HHHHHHHHHTTSCSEEEESHHH
T ss_pred ----------------HHHHHHHHHCCCCceeeecHHH
Confidence 56677788887 9988887654
No 492
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=57.37 E-value=22 Score=32.73 Aligned_cols=65 Identities=22% Similarity=0.343 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecC---CCCCCC----CCCCchh---HHHHHh-c-CCCEEEeCCCCCCCCCCCccC
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGT---MFGYND----LIVDPRN---LEWMRE-A-NCPVVADVTHSLQQPAGKKLD 209 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs---~~~y~~----~~~dL~~---i~~lk~-~-~~pV~~D~sHs~~~~~~~~~~ 209 (290)
+.+++.+-++...+.|-+ ++.-|. .++ +. +++. +. +..+++ + ++||.+|+.+
T Consensus 63 ~~~~a~~~A~~~v~~GAd---IIDIGgeSTrPG-~~v~~~eEl~-Rv~pvI~~l~~~~~~vpISIDT~~----------- 126 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGAD---VIDVGGVKAGPG-ERVDVDTEIT-RLVPFIEWLRGAYPDQLISVDTWR----------- 126 (318)
T ss_dssp -CHHHHHHHHHHHHTTCS---EEEEC-----------CHHHHHH-HHHHHHHHHHHHSTTCEEEEECSC-----------
T ss_pred CHHHHHHHHHHHHHCCCC---EEEECCCcCCCC-CCCCHHHHHH-HHHHHHHHHHhhCCCCeEEEeCCC-----------
Confidence 556666666666677753 333332 222 11 1111 23 344455 5 8889888776
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCC
Q 022892 210 GGGVASGGLRELIPCIARTAIAVGVD 235 (290)
Q Consensus 210 ~~~~~~~g~~~~~~~~a~aAva~GA~ 235 (290)
+.++.+|+.+||+
T Consensus 127 -------------~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 127 -------------AQVAKAACAAGAD 139 (318)
T ss_dssp -------------HHHHHHHHHHTCC
T ss_pred -------------HHHHHHHHHhCCC
Confidence 4566677777776
No 493
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=57.27 E-value=17 Score=36.08 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCC-cccCCCCChhHHHHHHHHHHHhcCCcEEE--eecCcccHHHHh
Q 022892 28 SEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTS-SKSFRGPGMVEGLKILEKVKIAYDIPIVT--DVHETVQCEEVG 104 (290)
Q Consensus 28 n~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts-~~~~~g~~~~~~l~~L~~~~~~~Gi~~~s--~~~d~~~~~~l~ 104 (290)
+.+...++|++|.+ +|++++-...-+.+++.. ...+.+.+ ..+.+++++++..++|++. .+++++.++.+.
T Consensus 226 ~~~~~~~~a~~l~~----~g~d~i~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l 299 (671)
T 1ps9_A 226 TFAETVELAQAIEA----AGATIINTGIGWHEARIPTIATPVPRG--AFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL 299 (671)
T ss_dssp CHHHHHHHHHHHHH----HTCSEEEEEECBTTCSSCSSSTTSCTT--TTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHh----cCCCEEEcCCCccccccccccccCCcc--hHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHH
Confidence 45666777777765 599987543211112211 01111111 3466778888889999998 467888887765
Q ss_pred h--hcceecccCCccCCHHHHHHHHh
Q 022892 105 K--VADIIQIPAFLCRQTDLLVAAAK 128 (290)
Q Consensus 105 ~--~~d~~kIgs~~~~n~~lL~~~a~ 128 (290)
+ .+|++.+|...+.|.++.+.+..
T Consensus 300 ~~g~aD~V~~gR~~l~~P~l~~k~~~ 325 (671)
T 1ps9_A 300 SRGDADMVSMARPFLADAELLSKAQS 325 (671)
T ss_dssp HTTSCSEEEESTHHHHCTTHHHHHHT
T ss_pred HcCCCCEEEeCHHHHhCcHHHHHHHc
Confidence 4 49999999999999888777653
No 494
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=57.25 E-value=67 Score=27.56 Aligned_cols=64 Identities=17% Similarity=0.117 Sum_probs=45.8
Q ss_pred cCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCCCC----------ChhHHHHHHHHHHHhcCCcEEEee
Q 022892 27 ESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFRGP----------GMVEGLKILEKVKIAYDIPIVTDV 94 (290)
Q Consensus 27 en~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~g~----------~~~~~l~~L~~~~~~~Gi~~~s~~ 94 (290)
.+.+..++.+.++++.|++.|+++|.+.-+.- +.|.+... .-...+++|.+.++++|+.++.-.
T Consensus 14 ~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~----~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G~ 87 (262)
T 3ivz_A 14 LEPDKNYSKAEKLIKEASKQGAQLVVLPELFD----TGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAGT 87 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT----TCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcc----cCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEeE
Confidence 57889999999999999999999988854331 11111110 002568889999999999988764
No 495
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=57.13 E-value=46 Score=28.18 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh-cCCCEEEeCCCCCCCCCCCccCCCCccCCCCcc
Q 022892 142 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 220 (290)
Q Consensus 142 tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~-~~~pV~~D~sHs~~~~~~~~~~~~~~~~~g~~~ 220 (290)
+.++... .+.. ..++++|+.... |.. --+..+..+++ .++||++-+++..
T Consensus 69 ~~~~al~---~~~~-~~~DlvllD~~l----p~~-~G~~l~~~lr~~~~~~iI~lt~~~~-------------------- 119 (249)
T 3q9s_A 69 SAMNGLI---KARE-DHPDLILLDLGL----PDF-DGGDVVQRLRKNSALPIIVLTARDT-------------------- 119 (249)
T ss_dssp SHHHHHH---HHHH-SCCSEEEEECCS----CHH-HHHHHHHHHHTTCCCCEEEEESCCS--------------------
T ss_pred CHHHHHH---HHhc-CCCCEEEEcCCC----CCC-CHHHHHHHHHcCCCCCEEEEECCCC--------------------
Confidence 5555444 3433 468899988643 210 01234455555 5789888566652
Q ss_pred cHHHHHHHHHHcCCCEEEEeeeC
Q 022892 221 LIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 221 ~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
......|..+||+| +|.|-+
T Consensus 120 --~~~~~~a~~~Ga~~-yl~Kp~ 139 (249)
T 3q9s_A 120 --VEEKVRLLGLGADD-YLIKPF 139 (249)
T ss_dssp --HHHHHHHHHHTCSE-EEESSC
T ss_pred --HHHHHHHHHCCCcE-EEECCC
Confidence 55667789999998 566654
No 496
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=57.10 E-value=22 Score=33.90 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHhcCCcEEEeecCcccHHHHh
Q 022892 73 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVG 104 (290)
Q Consensus 73 ~~~l~~L~~~~~~~Gi~~~s~~~d~~~~~~l~ 104 (290)
.+.++.+++++++++|.++=+|+.+++.+-+.
T Consensus 282 ~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~ 313 (444)
T 1w6t_A 282 AEQIDYLEELVNKYPIITIEDGMDENDWDGWK 313 (444)
T ss_dssp HHHHHHHHHHHHHSCEEEEESCSCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEECCCChhhHHHHH
Confidence 45566777777789999999999998776553
No 497
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=56.67 E-value=23 Score=29.26 Aligned_cols=123 Identities=12% Similarity=0.111 Sum_probs=70.0
Q ss_pred EEccCCccCHHHHHHHHHHHHHHHHHcCCCEEeccccccCCCCCcccCC-CCChhHHHHHHHHHHHhcCCcEEEeecCcc
Q 022892 20 LAGPNVIESEEHIMRMAKHIKSISTKVGLPLVFKSSFDKANRTSSKSFR-GPGMVEGLKILEKVKIAYDIPIVTDVHETV 98 (290)
Q Consensus 20 IAgpcsien~~~~le~Ak~L~~~a~~~G~~~V~~~~~~k~~rts~~~~~-g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~~ 98 (290)
+-.+.. +.....+.++++.+.+...|+.++.....+..-........ +.. ......+++.. .++.+..++.++.
T Consensus 45 l~~~~~--~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~gad~v~l~~~-~~~~~~~~~~~--~~~~~~v~~~t~~ 119 (215)
T 1xi3_A 45 MRIKNA--PTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPE-DMPIEVAKEIA--PNLIIGASVYSLE 119 (215)
T ss_dssp ECCCSC--CHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEEEECTT-SCCHHHHHHHC--TTSEEEEEESSHH
T ss_pred ECCCCC--CHHHHHHHHHHHHHHHHHcCCeEEEcChHHHHHHcCCCEEEECCc-cCCHHHHHHhC--CCCEEEEecCCHH
Confidence 334444 66677888999988887777755543322210000000000 000 11233444443 5777887888887
Q ss_pred cHHHHhh-hcceecccC-C--------ccCCHHHHHHHH-hcCCeEEEeCCCCCCHHHHHHH
Q 022892 99 QCEEVGK-VADIIQIPA-F--------LCRQTDLLVAAA-KTGKIINIKKGQFCASSVMVNS 149 (290)
Q Consensus 99 ~~~~l~~-~~d~~kIgs-~--------~~~n~~lL~~~a-~~~~PVilstG~~~tl~e~~~A 149 (290)
++....+ .+|++.+++ + ...+.++++++. ..+.||+..=|.. .+++..+
T Consensus 120 e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~--~~nv~~~ 179 (215)
T 1xi3_A 120 EALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGIN--KDNAREV 179 (215)
T ss_dssp HHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCC--TTTHHHH
T ss_pred HHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcC--HHHHHHH
Confidence 7765554 699998754 1 224566777765 3588999987765 5665553
No 498
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=56.44 E-value=81 Score=26.34 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=48.3
Q ss_pred HHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCCCchhHHHHHh--cCCCEEEeCCCCCCCC
Q 022892 126 AAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQP 203 (290)
Q Consensus 126 ~a~~~~PVilstG~~~tl~e~~~Ave~i~~~Gn~~i~L~~~gs~~~y~~~~~dL~~i~~lk~--~~~pV~~D~sHs~~~~ 203 (290)
+...+.-|..- .+.++.... +.. ..++++|+.-.. |.. --+..+..+++ .++||++=+.+..
T Consensus 43 L~~~g~~v~~~----~~~~~al~~---~~~-~~~dlvllD~~l----p~~-~g~~~~~~lr~~~~~~~ii~lt~~~~--- 106 (250)
T 3r0j_A 43 LKFQGFEVYTA----TNGAQALDR---ARE-TRPDAVILDVXM----PGM-DGFGVLRRLRADGIDAPALFLTARDS--- 106 (250)
T ss_dssp HHHTTCEEEEE----SSHHHHHHH---HHH-HCCSEEEEESCC----SSS-CHHHHHHHHHHTTCCCCEEEEECSTT---
T ss_pred HHHCCCEEEEE----CCHHHHHHH---HHh-CCCCEEEEeCCC----CCC-CHHHHHHHHHhcCCCCCEEEEECCCC---
Confidence 44556555422 255655544 333 357899988642 211 12345566666 3689888566652
Q ss_pred CCCccCCCCccCCCCcccHHHHHHHHHHcCCCEEEEeeeC
Q 022892 204 AGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 243 (290)
Q Consensus 204 ~~~~~~~~~~~~~g~~~~~~~~a~aAva~GA~G~~IEkH~ 243 (290)
......|..+||+| +|.|-+
T Consensus 107 -------------------~~~~~~~~~~Ga~~-yl~Kp~ 126 (250)
T 3r0j_A 107 -------------------LQDKIAGLTLGGDD-YVTKPF 126 (250)
T ss_dssp -------------------HHHHHHHHTSTTCE-EEESSC
T ss_pred -------------------HHHHHHHHHcCCcE-EEeCCC
Confidence 45566789999998 566654
No 499
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=56.32 E-value=1.7e+02 Score=29.35 Aligned_cols=91 Identities=10% Similarity=-0.021 Sum_probs=53.9
Q ss_pred CCeEEEeCCC-------CCC-HHHHHHHHHHHHHcCCCcEEEEeecCC--C------C-CCCCCCCchhHHHHHh-cCCC
Q 022892 130 GKIINIKKGQ-------FCA-SSVMVNSAEKVRLAGNPNVMVCERGTM--F------G-YNDLIVDPRNLEWMRE-ANCP 191 (290)
Q Consensus 130 ~~PVilstG~-------~~t-l~e~~~Ave~i~~~Gn~~i~L~~~gs~--~------~-y~~~~~dL~~i~~lk~-~~~p 191 (290)
++||.++-.. ..+ .+|....+..+.. +. +.+=++.|+. + + |...-.++..+..+|+ .++|
T Consensus 216 ~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~-d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p 293 (729)
T 1o94_A 216 DCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LV-DMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKP 293 (729)
T ss_dssp TSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GC-SEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSC
T ss_pred CceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hc-CEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCE
Confidence 7899998642 124 5677777766654 53 3333444431 0 0 1111224566777888 8999
Q ss_pred EEEeCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CCEEEEeeeCC
Q 022892 192 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 244 (290)
Q Consensus 192 V~~D~sHs~~~~~~~~~~~~~~~~~g~~~~~~~~a~aAva~G-A~G~~IEkH~t 244 (290)
|+....-. . +..+..+++.| ||++++=+.+-
T Consensus 294 vi~~G~i~-----------------~-----~~~a~~~l~~g~aD~V~~gR~~l 325 (729)
T 1o94_A 294 VLGVGRYT-----------------D-----PEKMIEIVTKGYADIIGCARPSI 325 (729)
T ss_dssp EECCSCCC-----------------C-----HHHHHHHHHTTSCSBEEESHHHH
T ss_pred EEEeCCCC-----------------C-----HHHHHHHHHCCCCCEEEeCchhh
Confidence 97622211 1 56677788887 99888877553
No 500
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=56.31 E-value=5.7 Score=33.90 Aligned_cols=65 Identities=6% Similarity=0.052 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEecc-ccccCCCCCc----ccCCCCChhHHHHHHHHHHHhcCCcEEEeecCc
Q 022892 29 EEHIMRMAKHIKSISTKVGLPLVFKS-SFDKANRTSS----KSFRGPGMVEGLKILEKVKIAYDIPIVTDVHET 97 (290)
Q Consensus 29 ~~~~le~Ak~L~~~a~~~G~~~V~~~-~~~k~~rts~----~~~~g~~~~~~l~~L~~~~~~~Gi~~~s~~~d~ 97 (290)
.+..++..++.++.|+++|+..|..- .+. +...+ ..|+. +.+.+..+.+++++.|+.+.-|.+..
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~--~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~l~lEn~~~ 140 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFHSGIP--HGRTPEEALERALP--LAEALGLVVRRARTLGVRLLLENSHE 140 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCCC--TTCCHHHHHHTHHH--HHHHTHHHHHHHHHHTCEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCC--cccccccHHHHHHH--HHHHHHHHHHHHhhcCCEEEEcCCCC
Confidence 34568899999999999999877542 111 11100 00110 13567788888999999999999864
Done!