Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022893
MADTICRTLRDGGLEGEHAPALTIKDSKASPFGFDVFNYVLTQLSNYILAGKSQSRGLVV
VAYSRSPSFYVDLLKRRGIDIASSHDWIHILDCYTDPLGWKNWLIDKDISQEASSLSSFC
QDVRNLDKLYSLIIEQGKGLIGQGKDRFSIAIDSVSEMVRHASISSVAGILSNLRSHDQV
SSIFWLLHSDLHEIKFTSVLEYLSSMVASVEPFNQAAFGQRVDLENLSMLEQNFRKGKFH
VRFKRRNGRVRVMCEEILVELAGIKFTPVLSEDEIINQRLLPKVSIIVLS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022893
        (290 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062190 - symbol:AT2G18410 "AT2G18410" species...   787  3.0e-78   1


>TAIR|locus:2062190 [details] [associations]
            symbol:AT2G18410 "AT2G18410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006626 "protein targeting to mitochondrion"
            evidence=RCA] GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0016746
            EMBL:AC006439 GO:GO:0033588 EMBL:BX819102 IPI:IPI00530014
            IPI:IPI00656707 IPI:IPI01020432 PIR:A84564 RefSeq:NP_001031371.1
            RefSeq:NP_179432.3 UniGene:At.40000 ProteinModelPortal:F4IQJ2
            PRIDE:F4IQJ2 EnsemblPlants:AT2G18410.1 GeneID:816356
            KEGG:ath:AT2G18410 TAIR:At2g18410 OMA:VLPFEHQ PhylomeDB:F4IQJ2
            InterPro:IPR019519 Pfam:PF10483 Uniprot:F4IQJ2
        Length = 374

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 161/288 (55%), Positives = 216/288 (75%)

Query:     1 MADTICRTLRDGGLEGEHAPALTIKDSKASPFGFDVFNYVLTQLSNYILAGKSQSRGLVV 60
             MA++I R LRDGG EGE APALTI+++ ASPFG DV  Y+LT LS+ ILAGKS S+GLV+
Sbjct:     1 MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query:    61 VAYSRSPSFYVDLLKRRGIDIASSHDWIHILDCYTDPLGWKNWLIDKDISQ--EASSLSS 118
             + +SRSPSFY+ LLK++GI ++SS  WI ILDCYTDPLGW    ID+  +   E SSL  
Sbjct:    61 ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGW----IDQSSTSFSEGSSLIK 116

Query:   119 FCQDVRNLDKLYSLIIEQGKGLIGQGKDRFSIAIDSVSEMVRHASISSVAGILSNLRSHD 178
               + V +L KL+S IIE G+ L+G GK RF +AIDSV+E++RH+++  V+G+L++LRSH 
Sbjct:   117 LHKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRSHA 176

Query:   179 QVSSIFWLLHSDLHEIKFTSVLEYLSSMVASVEPFNQAAFGQRVDLENLSMLEQNFRKGK 238
             Q+SS+FW L++DLH+ K T+ LEY+S+M A++EP   ++ GQR  LENL  + Q+F KG+
Sbjct:   177 QISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGKGR 236

Query:   239 FHVRFKRRNGRVRVMCEEILVELAGIKFTPVLSEDEII--NQRLLPKV 284
             FHVRFK R GRVRVM EE  V+ +GI F+P+ S D +I   + LLPKV
Sbjct:   237 FHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKV 284


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      290       290   0.00089  115 3  11 22  0.48    33
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.64u 0.14s 24.78t   Elapsed:  00:00:01
  Total cpu time:  24.64u 0.14s 24.78t   Elapsed:  00:00:01
  Start:  Sat May 11 00:43:42 2013   End:  Sat May 11 00:43:43 2013

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