Query 022896
Match_columns 290
No_of_seqs 175 out of 1920
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 12:57:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef6_A Toluene 1,2-dioxygenase 100.0 6.6E-38 2.3E-42 266.7 22.7 262 13-281 2-282 (410)
2 3lxd_A FAD-dependent pyridine 100.0 4.3E-37 1.5E-41 262.4 26.1 263 12-281 8-292 (415)
3 3fg2_P Putative rubredoxin red 100.0 6.8E-37 2.3E-41 260.2 25.6 261 14-281 2-282 (404)
4 4eqs_A Coenzyme A disulfide re 100.0 2.4E-37 8.1E-42 264.9 22.9 259 15-282 2-284 (437)
5 4g6h_A Rotenone-insensitive NA 100.0 3.6E-37 1.2E-41 267.4 24.0 272 11-283 40-381 (502)
6 1ges_A Glutathione reductase; 100.0 4.3E-38 1.5E-42 270.9 17.5 261 13-280 4-309 (450)
7 2wpf_A Trypanothione reductase 100.0 2.8E-38 9.5E-43 274.7 16.3 265 13-280 7-336 (495)
8 3ic9_A Dihydrolipoamide dehydr 100.0 4E-38 1.4E-42 273.7 16.9 267 11-282 6-321 (492)
9 3oc4_A Oxidoreductase, pyridin 100.0 3.4E-37 1.2E-41 265.7 22.2 260 14-280 3-285 (452)
10 4dna_A Probable glutathione re 100.0 4.5E-38 1.5E-42 271.9 15.9 266 12-282 4-314 (463)
11 2r9z_A Glutathione amide reduc 100.0 7.4E-38 2.5E-42 270.2 17.0 261 13-280 4-308 (463)
12 2cdu_A NADPH oxidase; flavoenz 100.0 2E-36 6.7E-41 261.0 25.1 260 14-280 1-288 (452)
13 3klj_A NAD(FAD)-dependent dehy 100.0 3.2E-37 1.1E-41 259.6 19.2 249 12-280 8-271 (385)
14 1mo9_A ORF3; nucleotide bindin 100.0 9.4E-38 3.2E-42 273.3 16.5 265 11-281 41-360 (523)
15 3urh_A Dihydrolipoyl dehydroge 100.0 3.1E-38 1.1E-42 274.9 13.1 268 12-282 24-346 (491)
16 2gqw_A Ferredoxin reductase; f 100.0 2.8E-36 9.5E-41 256.5 24.1 256 12-281 6-280 (408)
17 2hqm_A GR, grase, glutathione 100.0 4.6E-37 1.6E-41 266.4 19.2 262 13-280 11-328 (479)
18 1fec_A Trypanothione reductase 100.0 1.7E-37 5.8E-42 269.6 16.5 264 13-279 3-331 (490)
19 3o0h_A Glutathione reductase; 100.0 1.2E-37 4E-42 270.6 15.2 267 12-282 25-334 (484)
20 2qae_A Lipoamide, dihydrolipoy 100.0 2.3E-37 8E-42 267.9 16.4 263 13-280 2-321 (468)
21 3iwa_A FAD-dependent pyridine 100.0 1.6E-36 5.5E-41 262.9 21.6 265 13-281 3-301 (472)
22 1xhc_A NADH oxidase /nitrite r 100.0 2.7E-36 9.4E-41 252.8 22.1 251 13-278 8-272 (367)
23 3kd9_A Coenzyme A disulfide re 100.0 3E-36 1E-40 259.7 22.9 262 13-281 3-287 (449)
24 2bc0_A NADH oxidase; flavoprot 100.0 5.4E-36 1.8E-40 260.5 24.3 261 13-280 35-332 (490)
25 4b1b_A TRXR, thioredoxin reduc 100.0 9.7E-37 3.3E-41 265.4 19.1 267 13-283 42-368 (542)
26 1zk7_A HGII, reductase, mercur 100.0 1.4E-36 4.8E-41 263.0 19.9 263 13-281 4-316 (467)
27 3lad_A Dihydrolipoamide dehydr 100.0 2.3E-37 7.8E-42 268.6 14.4 268 12-282 2-326 (476)
28 2eq6_A Pyruvate dehydrogenase 100.0 2.2E-37 7.7E-42 267.4 14.1 262 13-281 6-316 (464)
29 3ntd_A FAD-dependent pyridine 100.0 7.4E-36 2.5E-40 264.5 24.1 263 14-281 2-310 (565)
30 2v3a_A Rubredoxin reductase; a 100.0 1.5E-35 5E-40 250.5 24.3 258 13-278 4-281 (384)
31 1zmd_A Dihydrolipoyl dehydroge 100.0 7.5E-37 2.6E-41 265.1 16.5 264 13-281 6-327 (474)
32 1onf_A GR, grase, glutathione 100.0 1.4E-36 4.8E-41 264.6 17.9 257 13-277 2-315 (500)
33 1q1r_A Putidaredoxin reductase 100.0 2.9E-35 1E-39 251.8 25.5 262 13-281 4-291 (431)
34 1ojt_A Surface protein; redox- 100.0 4.5E-37 1.6E-41 266.8 14.3 264 13-281 6-331 (482)
35 3l8k_A Dihydrolipoyl dehydroge 100.0 3.7E-37 1.3E-41 266.3 13.3 260 13-281 4-315 (466)
36 3dk9_A Grase, GR, glutathione 100.0 2.3E-36 7.7E-41 262.4 18.2 266 12-282 19-339 (478)
37 3fbs_A Oxidoreductase; structu 100.0 7.6E-37 2.6E-41 249.8 14.0 254 13-281 2-272 (297)
38 1dxl_A Dihydrolipoamide dehydr 100.0 9.1E-37 3.1E-41 264.5 15.2 265 12-281 5-324 (470)
39 3cgb_A Pyridine nucleotide-dis 100.0 3E-35 1E-39 255.2 24.3 262 13-280 36-324 (480)
40 2yqu_A 2-oxoglutarate dehydrog 100.0 4E-37 1.4E-41 265.5 12.4 265 13-282 1-310 (455)
41 1ebd_A E3BD, dihydrolipoamide 100.0 7.3E-37 2.5E-41 263.9 13.4 262 13-281 3-315 (455)
42 1nhp_A NADH peroxidase; oxidor 100.0 8.3E-35 2.8E-39 250.5 25.6 260 14-280 1-287 (447)
43 3ics_A Coenzyme A-disulfide re 100.0 3.8E-35 1.3E-39 260.7 23.9 264 11-281 34-325 (588)
44 1m6i_A Programmed cell death p 100.0 2.9E-35 1E-39 255.6 22.5 267 11-281 9-325 (493)
45 1xdi_A RV3303C-LPDA; reductase 100.0 8.3E-37 2.9E-41 266.3 12.4 263 13-281 2-324 (499)
46 2a8x_A Dihydrolipoyl dehydroge 100.0 2.8E-36 9.5E-41 260.9 14.3 262 13-281 3-316 (464)
47 3dgz_A Thioredoxin reductase 2 100.0 6.4E-35 2.2E-39 253.7 22.3 262 12-277 5-329 (488)
48 1v59_A Dihydrolipoamide dehydr 100.0 3.6E-36 1.2E-40 261.2 13.8 264 13-281 5-332 (478)
49 1lvl_A Dihydrolipoamide dehydr 100.0 6.3E-36 2.2E-40 257.9 14.7 259 13-281 5-312 (458)
50 3qfa_A Thioredoxin reductase 1 100.0 1.8E-35 6.2E-40 258.5 17.7 262 12-277 31-357 (519)
51 3dgh_A TRXR-1, thioredoxin red 100.0 2.5E-35 8.4E-40 256.1 18.4 261 12-277 8-329 (483)
52 3hyw_A Sulfide-quinone reducta 100.0 3E-34 1E-38 245.6 24.6 267 13-282 2-302 (430)
53 3f8d_A Thioredoxin reductase ( 100.0 5.8E-35 2E-39 241.4 19.2 254 13-279 15-292 (323)
54 4gcm_A TRXR, thioredoxin reduc 100.0 9.9E-36 3.4E-40 244.9 14.2 258 10-279 3-283 (312)
55 4fk1_A Putative thioredoxin re 100.0 2E-35 6.7E-40 242.2 15.2 253 13-279 6-277 (304)
56 4a5l_A Thioredoxin reductase; 100.0 9.6E-35 3.3E-39 239.3 18.7 256 13-280 4-290 (314)
57 2q7v_A Thioredoxin reductase; 100.0 6.6E-35 2.2E-39 241.4 17.1 254 13-279 8-289 (325)
58 3r9u_A Thioredoxin reductase; 100.0 2.5E-34 8.6E-39 236.8 18.9 257 12-278 3-288 (315)
59 3vrd_B FCCB subunit, flavocyto 100.0 1.1E-34 3.6E-39 246.8 16.5 266 13-282 2-303 (401)
60 2q0l_A TRXR, thioredoxin reduc 100.0 2.9E-34 9.9E-39 236.1 17.9 256 13-278 1-285 (311)
61 3itj_A Thioredoxin reductase 1 100.0 1.2E-34 4E-39 241.1 15.3 257 10-278 19-311 (338)
62 3cty_A Thioredoxin reductase; 100.0 2.8E-34 9.7E-39 237.0 17.1 256 11-279 14-293 (319)
63 1trb_A Thioredoxin reductase; 100.0 7.6E-34 2.6E-38 234.5 19.0 258 13-279 5-291 (320)
64 2zbw_A Thioredoxin reductase; 100.0 1.4E-34 4.7E-39 240.5 14.2 259 12-279 4-292 (335)
65 2a87_A TRXR, TR, thioredoxin r 100.0 4.1E-34 1.4E-38 237.6 16.4 268 1-279 1-293 (335)
66 1fl2_A Alkyl hydroperoxide red 100.0 6.9E-34 2.4E-38 233.7 17.6 253 13-279 1-282 (310)
67 3h8l_A NADH oxidase; membrane 100.0 2.9E-33 9.8E-38 238.5 20.1 262 14-282 2-315 (409)
68 3h28_A Sulfide-quinone reducta 100.0 5.6E-33 1.9E-37 238.0 21.3 264 13-280 2-300 (430)
69 3sx6_A Sulfide-quinone reducta 100.0 5.9E-33 2E-37 238.2 21.1 263 13-280 4-311 (437)
70 2x8g_A Thioredoxin glutathione 100.0 8.2E-33 2.8E-37 246.1 22.3 264 11-278 105-437 (598)
71 3lzw_A Ferredoxin--NADP reduct 100.0 4.3E-34 1.5E-38 237.1 11.9 253 13-279 7-290 (332)
72 3ab1_A Ferredoxin--NADP reduct 100.0 2.3E-33 7.9E-38 235.3 15.2 259 12-279 13-303 (360)
73 3d1c_A Flavin-containing putat 100.0 1.6E-33 5.5E-38 237.1 13.5 260 13-282 4-316 (369)
74 1vdc_A NTR, NADPH dependent th 100.0 3.4E-33 1.2E-37 231.9 14.3 255 13-279 8-300 (333)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 9.9E-32 3.4E-36 234.9 16.1 256 11-280 210-494 (521)
76 3s5w_A L-ornithine 5-monooxyge 100.0 1.9E-31 6.5E-36 230.9 14.9 263 13-280 30-423 (463)
77 2vdc_G Glutamate synthase [NAD 100.0 9.5E-32 3.3E-36 230.5 10.8 254 11-280 120-423 (456)
78 4a9w_A Monooxygenase; baeyer-v 100.0 5E-31 1.7E-35 220.7 13.1 252 13-277 3-327 (357)
79 1lqt_A FPRA; NADP+ derivative, 100.0 7.1E-30 2.4E-34 219.2 12.1 255 13-280 3-365 (456)
80 2xve_A Flavin-containing monoo 100.0 4.1E-29 1.4E-33 215.5 14.9 244 13-279 2-320 (464)
81 3k30_A Histamine dehydrogenase 100.0 2.8E-30 9.6E-35 232.8 7.3 249 10-283 388-658 (690)
82 1cjc_A Protein (adrenodoxin re 100.0 4.6E-29 1.6E-33 214.5 12.6 256 13-280 6-373 (460)
83 1o94_A Tmadh, trimethylamine d 100.0 1.1E-29 3.8E-34 229.8 7.8 248 11-279 387-679 (729)
84 1gte_A Dihydropyrimidine dehyd 100.0 6.9E-29 2.4E-33 231.7 13.1 253 12-280 186-487 (1025)
85 2gag_A Heterotetrameric sarcos 100.0 1.8E-28 6.2E-33 227.5 13.9 250 13-281 128-425 (965)
86 2gv8_A Monooxygenase; FMO, FAD 100.0 3.6E-28 1.2E-32 209.2 12.6 245 12-279 5-341 (447)
87 1y56_A Hypothetical protein PH 100.0 3.3E-28 1.1E-32 211.4 12.2 230 13-280 108-357 (493)
88 3gwf_A Cyclohexanone monooxyge 99.9 2.2E-27 7.4E-32 207.7 10.4 158 13-172 8-212 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.9 2.1E-26 7.2E-31 207.1 13.3 238 11-280 371-654 (671)
90 3uox_A Otemo; baeyer-villiger 99.9 6.6E-26 2.3E-30 198.5 9.9 160 12-173 8-220 (545)
91 4ap3_A Steroid monooxygenase; 99.9 4E-25 1.4E-29 193.7 9.0 160 12-173 20-226 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.7E-23 5.9E-28 183.9 8.4 160 12-173 15-221 (542)
93 4b63_A L-ornithine N5 monooxyg 99.9 6.2E-21 2.1E-25 165.8 23.2 179 98-276 199-458 (501)
94 2ywl_A Thioredoxin reductase r 99.8 1.3E-19 4.6E-24 136.6 13.7 133 138-280 3-149 (180)
95 2e5v_A L-aspartate oxidase; ar 99.6 4.9E-16 1.7E-20 134.1 3.0 159 97-277 160-340 (472)
96 3k7m_X 6-hydroxy-L-nicotine ox 99.6 8.7E-16 3E-20 131.5 2.6 97 180-279 205-309 (431)
97 3fpz_A Thiazole biosynthetic e 99.5 6.1E-18 2.1E-22 139.5 -15.0 40 12-51 64-106 (326)
98 3v76_A Flavoprotein; structura 99.5 4.3E-13 1.5E-17 113.7 13.2 57 179-236 132-188 (417)
99 3nyc_A D-arginine dehydrogenas 99.5 2.5E-13 8.7E-18 114.2 11.4 61 179-241 154-214 (381)
100 1ryi_A Glycine oxidase; flavop 99.4 3.3E-12 1.1E-16 107.4 12.9 63 179-243 164-226 (382)
101 2gf3_A MSOX, monomeric sarcosi 99.4 1.5E-11 5.2E-16 103.7 15.7 80 161-244 134-213 (389)
102 1y56_B Sarcosine oxidase; dehy 99.4 8.9E-12 3.1E-16 104.8 13.9 56 179-235 149-205 (382)
103 3pvc_A TRNA 5-methylaminomethy 99.4 2E-11 7E-16 110.2 16.9 63 179-242 412-475 (689)
104 3dme_A Conserved exported prot 99.4 1.3E-12 4.3E-17 109.4 8.4 64 179-243 150-216 (369)
105 2cul_A Glucose-inhibited divis 99.4 1.4E-12 4.6E-17 102.1 8.0 97 137-236 4-126 (232)
106 3ps9_A TRNA 5-methylaminomethy 99.3 4.3E-11 1.5E-15 108.0 17.1 63 179-242 417-479 (676)
107 4dgk_A Phytoene dehydrogenase; 99.3 1E-11 3.4E-16 108.3 11.4 56 180-235 222-278 (501)
108 3dje_A Fructosyl amine: oxygen 99.3 2.5E-11 8.5E-16 104.0 12.4 57 179-235 161-221 (438)
109 2i0z_A NAD(FAD)-utilizing dehy 99.3 5.3E-11 1.8E-15 102.1 14.1 57 179-235 134-191 (447)
110 2gag_B Heterotetrameric sarcos 99.3 8.4E-11 2.9E-15 99.6 15.0 55 180-235 175-230 (405)
111 2gqf_A Hypothetical protein HI 99.3 6.2E-11 2.1E-15 100.1 13.7 58 178-236 108-169 (401)
112 3nrn_A Uncharacterized protein 99.3 7.2E-12 2.5E-16 106.8 7.5 61 179-241 189-249 (421)
113 3nlc_A Uncharacterized protein 99.3 1E-11 3.6E-16 108.2 7.9 67 179-245 220-289 (549)
114 2oln_A NIKD protein; flavoprot 99.2 4.2E-11 1.4E-15 101.3 11.0 61 180-242 154-214 (397)
115 3nix_A Flavoprotein/dehydrogen 99.2 3.3E-11 1.1E-15 102.7 9.6 56 180-235 107-166 (421)
116 2x3n_A Probable FAD-dependent 99.2 4.9E-11 1.7E-15 101.0 10.4 57 180-236 108-167 (399)
117 3ka7_A Oxidoreductase; structu 99.2 4.5E-11 1.5E-15 102.0 9.8 62 179-241 196-258 (425)
118 2uzz_A N-methyl-L-tryptophan o 99.2 1.3E-10 4.4E-15 97.3 12.4 55 180-235 150-204 (372)
119 3alj_A 2-methyl-3-hydroxypyrid 99.2 4.9E-10 1.7E-14 94.1 15.3 54 180-236 108-161 (379)
120 4gde_A UDP-galactopyranose mut 99.2 3.5E-11 1.2E-15 105.2 8.6 53 180-234 223-275 (513)
121 2vou_A 2,6-dihydroxypyridine h 99.2 2.8E-10 9.7E-15 96.2 13.6 55 180-236 100-154 (397)
122 3rp8_A Flavoprotein monooxygen 99.2 2.6E-10 8.9E-15 96.7 12.7 56 180-237 128-183 (407)
123 1s3e_A Amine oxidase [flavin-c 99.2 1E-11 3.6E-16 108.7 3.8 46 190-235 223-268 (520)
124 3cgv_A Geranylgeranyl reductas 99.1 1.1E-10 3.7E-15 98.7 9.0 56 180-235 103-162 (397)
125 1pj5_A N,N-dimethylglycine oxi 99.1 7E-10 2.4E-14 102.3 14.3 62 179-242 151-213 (830)
126 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 1.8E-10 6E-15 95.4 9.4 42 192-233 122-163 (342)
127 2ywl_A Thioredoxin reductase r 99.1 8.4E-11 2.9E-15 88.1 6.6 100 13-113 1-110 (180)
128 1yvv_A Amine oxidase, flavin-c 99.1 9.5E-10 3.2E-14 90.7 13.3 46 193-238 119-165 (336)
129 3fmw_A Oxygenase; mithramycin, 99.1 7E-11 2.4E-15 104.1 6.8 56 180-235 149-207 (570)
130 3axb_A Putative oxidoreductase 99.1 7.2E-11 2.5E-15 101.5 6.6 63 180-244 182-262 (448)
131 3oz2_A Digeranylgeranylglycero 99.1 2E-10 6.8E-15 96.8 8.9 56 180-235 103-162 (397)
132 2cul_A Glucose-inhibited divis 99.1 1.2E-10 4.1E-15 91.0 6.9 101 13-113 3-125 (232)
133 3i6d_A Protoporphyrinogen oxid 99.1 3.2E-11 1.1E-15 104.3 3.6 41 194-234 248-288 (470)
134 3nks_A Protoporphyrinogen oxid 99.1 5.8E-10 2E-14 96.5 11.0 55 180-235 235-290 (477)
135 3i3l_A Alkylhalidase CMLS; fla 99.1 4.8E-10 1.6E-14 99.1 10.3 56 180-235 129-188 (591)
136 2qa2_A CABE, polyketide oxygen 99.1 1.2E-09 3.9E-14 95.0 12.1 56 180-235 108-166 (499)
137 3ihg_A RDME; flavoenzyme, anth 99.1 1.6E-10 5.3E-15 101.6 6.7 56 180-235 121-183 (535)
138 3e1t_A Halogenase; flavoprotei 99.1 2E-10 7E-15 100.2 6.9 57 180-236 112-173 (512)
139 3ces_A MNMG, tRNA uridine 5-ca 99.1 2.6E-10 9.1E-15 100.4 7.5 141 12-168 27-220 (651)
140 3atr_A Conserved archaeal prot 99.0 8.4E-10 2.9E-14 94.9 10.4 57 180-236 101-163 (453)
141 1rp0_A ARA6, thiazole biosynth 99.0 7.2E-10 2.5E-14 89.3 9.4 140 136-277 39-244 (284)
142 3kkj_A Amine oxidase, flavin-c 99.0 1.5E-10 5.2E-15 92.9 5.0 40 12-51 1-41 (336)
143 2qa1_A PGAE, polyketide oxygen 99.0 1.2E-09 4E-14 95.0 10.0 56 180-235 107-165 (500)
144 3da1_A Glycerol-3-phosphate de 99.0 9.2E-10 3.2E-14 96.9 9.5 63 179-242 170-238 (561)
145 1k0i_A P-hydroxybenzoate hydro 99.0 2.6E-09 9E-14 90.1 11.9 58 180-237 104-165 (394)
146 3p1w_A Rabgdi protein; GDI RAB 99.0 2.6E-09 8.9E-14 91.3 10.4 56 179-234 256-313 (475)
147 3c4n_A Uncharacterized protein 99.0 7.1E-09 2.4E-13 87.8 12.9 55 180-235 173-236 (405)
148 1y0p_A Fumarate reductase flav 99.0 7.8E-09 2.7E-13 91.5 13.0 57 179-235 255-317 (571)
149 2qcu_A Aerobic glycerol-3-phos 98.9 9.7E-09 3.3E-13 89.4 13.3 57 179-235 149-210 (501)
150 3pl8_A Pyranose 2-oxidase; sub 98.9 1.1E-10 3.6E-15 104.0 0.6 61 191-251 272-340 (623)
151 1qo8_A Flavocytochrome C3 fuma 98.9 2E-08 6.9E-13 88.7 15.1 58 179-236 250-313 (566)
152 2e4g_A Tryptophan halogenase; 98.9 8.2E-09 2.8E-13 90.8 12.2 56 180-236 195-253 (550)
153 4at0_A 3-ketosteroid-delta4-5a 98.9 3.6E-08 1.2E-12 86.0 14.0 61 180-240 203-270 (510)
154 2zxi_A TRNA uridine 5-carboxym 98.9 3.4E-09 1.2E-13 93.1 7.4 34 12-45 26-60 (637)
155 3c96_A Flavin-containing monoo 98.9 6.4E-09 2.2E-13 88.2 8.9 56 180-236 108-170 (410)
156 1rp0_A ARA6, thiazole biosynth 98.9 3.9E-09 1.3E-13 85.0 7.1 37 12-48 38-76 (284)
157 2rgh_A Alpha-glycerophosphate 98.8 5.9E-08 2E-12 85.7 14.7 62 179-241 188-255 (571)
158 1d4d_A Flavocytochrome C fumar 98.8 1.8E-07 6E-12 82.7 17.1 57 180-236 256-318 (572)
159 3cp8_A TRNA uridine 5-carboxym 98.8 4.1E-09 1.4E-13 92.8 6.3 35 11-45 19-54 (641)
160 4a9w_A Monooxygenase; baeyer-v 98.8 2.7E-08 9.2E-13 82.5 11.0 96 137-235 4-132 (357)
161 2xdo_A TETX2 protein; tetracyc 98.8 8.4E-09 2.9E-13 87.2 7.9 35 12-46 25-60 (398)
162 3f8d_A Thioredoxin reductase ( 98.8 2.8E-08 9.5E-13 81.3 10.5 99 137-238 16-128 (323)
163 2bry_A NEDD9 interacting prote 98.8 6.7E-09 2.3E-13 90.2 6.9 101 135-237 91-232 (497)
164 2gmh_A Electron transfer flavo 98.8 2.8E-08 9.7E-13 87.9 11.1 57 180-236 145-218 (584)
165 2bry_A NEDD9 interacting prote 98.8 4.5E-09 1.5E-13 91.3 5.9 38 11-48 90-128 (497)
166 2aqj_A Tryptophan halogenase, 98.8 2.5E-08 8.6E-13 87.6 10.1 56 180-236 166-223 (538)
167 3klj_A NAD(FAD)-dependent dehy 98.8 5.6E-08 1.9E-12 81.6 10.8 99 135-238 8-119 (385)
168 2zbw_A Thioredoxin reductase; 98.7 6.4E-08 2.2E-12 79.7 10.9 96 137-234 6-120 (335)
169 3lzw_A Ferredoxin--NADP reduct 98.7 3.5E-08 1.2E-12 81.0 9.0 94 137-233 8-121 (332)
170 2wdq_A Succinate dehydrogenase 98.7 1E-07 3.6E-12 84.3 12.3 57 179-235 143-206 (588)
171 2r0c_A REBC; flavin adenine di 98.7 6.5E-08 2.2E-12 85.1 10.8 54 180-236 139-197 (549)
172 3ab1_A Ferredoxin--NADP reduct 98.7 1.9E-07 6.3E-12 77.7 13.0 98 136-235 14-131 (360)
173 2weu_A Tryptophan 5-halogenase 98.7 7.4E-08 2.5E-12 84.1 10.8 56 180-236 174-231 (511)
174 3vrd_B FCCB subunit, flavocyto 98.7 3.3E-08 1.1E-12 83.5 8.1 103 135-240 1-113 (401)
175 3fbs_A Oxidoreductase; structu 98.7 8.9E-08 3.1E-12 77.3 9.9 99 137-238 3-115 (297)
176 1kf6_A Fumarate reductase flav 98.7 3.5E-08 1.2E-12 87.6 7.5 56 180-235 135-197 (602)
177 3hyw_A Sulfide-quinone reducta 98.7 3.6E-08 1.2E-12 84.1 7.4 94 137-235 3-109 (430)
178 3itj_A Thioredoxin reductase 1 98.7 9E-08 3.1E-12 78.8 9.5 101 135-238 21-145 (338)
179 4hb9_A Similarities with proba 98.7 3.6E-08 1.2E-12 83.5 7.1 34 14-47 2-36 (412)
180 3sx6_A Sulfide-quinone reducta 98.6 5.7E-08 1.9E-12 83.1 7.8 103 136-241 4-118 (437)
181 2bcg_G Secretory pathway GDP d 98.6 2.5E-08 8.6E-13 85.6 4.6 55 180-235 243-300 (453)
182 1fl2_A Alkyl hydroperoxide red 98.6 2.7E-07 9.3E-12 75.0 10.4 98 138-237 3-117 (310)
183 2q0l_A TRXR, thioredoxin reduc 98.6 3.2E-07 1.1E-11 74.6 10.8 99 137-238 2-117 (311)
184 3oc4_A Oxidoreductase, pyridin 98.6 1.4E-07 4.8E-12 81.0 9.0 102 137-238 3-118 (452)
185 2xve_A Flavin-containing monoo 98.6 5.5E-07 1.9E-11 77.5 12.5 102 137-238 3-171 (464)
186 2e1m_A L-glutamate oxidase; L- 98.6 3.4E-08 1.2E-12 82.1 4.5 44 11-54 42-87 (376)
187 1sez_A Protoporphyrinogen oxid 98.6 3.5E-08 1.2E-12 86.0 4.8 42 11-52 11-53 (504)
188 1vdc_A NTR, NADPH dependent th 98.6 3.3E-07 1.1E-11 75.3 10.3 98 137-238 9-127 (333)
189 3ef6_A Toluene 1,2-dioxygenase 98.6 5.2E-07 1.8E-11 76.4 11.7 99 137-238 3-114 (410)
190 3d1c_A Flavin-containing putat 98.6 3.6E-07 1.2E-11 76.2 10.6 96 137-236 5-144 (369)
191 3h8l_A NADH oxidase; membrane 98.6 1.3E-07 4.4E-12 80.2 7.6 103 137-240 2-118 (409)
192 4ap3_A Steroid monooxygenase; 98.6 2.4E-07 8.4E-12 81.3 9.5 101 136-238 21-164 (549)
193 3gwf_A Cyclohexanone monooxyge 98.5 4E-07 1.4E-11 79.7 10.5 95 137-233 9-145 (540)
194 2b9w_A Putative aminooxidase; 98.5 5.3E-08 1.8E-12 82.9 4.8 53 181-234 205-257 (424)
195 3hdq_A UDP-galactopyranose mut 98.5 5.8E-08 2E-12 81.3 4.9 44 11-54 27-71 (397)
196 2q7v_A Thioredoxin reductase; 98.5 7E-07 2.4E-11 73.1 11.2 98 137-238 9-126 (325)
197 1q1r_A Putidaredoxin reductase 98.5 4.4E-07 1.5E-11 77.4 10.3 103 136-240 4-119 (431)
198 2gv8_A Monooxygenase; FMO, FAD 98.5 3.9E-07 1.3E-11 78.1 10.0 101 135-237 5-181 (447)
199 1v0j_A UDP-galactopyranose mut 98.5 8.6E-08 2.9E-12 80.9 5.1 43 12-54 6-50 (399)
200 1rsg_A FMS1 protein; FAD bindi 98.5 4.4E-08 1.5E-12 85.6 3.3 41 13-53 8-50 (516)
201 1c0p_A D-amino acid oxidase; a 98.5 6.8E-08 2.3E-12 80.5 4.3 36 11-46 4-40 (363)
202 3uox_A Otemo; baeyer-villiger 98.5 6.9E-07 2.4E-11 78.3 10.5 100 136-237 9-151 (545)
203 3h28_A Sulfide-quinone reducta 98.5 1.1E-07 3.6E-12 81.2 5.2 99 137-238 3-112 (430)
204 2yg5_A Putrescine oxidase; oxi 98.5 5.3E-08 1.8E-12 83.7 3.3 40 13-52 5-45 (453)
205 2jae_A L-amino acid oxidase; o 98.5 9.5E-08 3.2E-12 82.9 4.7 42 11-52 9-51 (489)
206 3kd9_A Coenzyme A disulfide re 98.5 5.9E-07 2E-11 77.1 9.5 102 136-239 3-118 (449)
207 4a5l_A Thioredoxin reductase; 98.5 9.6E-07 3.3E-11 71.8 10.2 102 137-241 5-127 (314)
208 3ics_A Coenzyme A-disulfide re 98.5 6.9E-07 2.3E-11 79.3 10.0 104 135-238 35-155 (588)
209 3ihm_A Styrene monooxygenase A 98.5 6.5E-08 2.2E-12 82.5 3.2 34 12-45 21-55 (430)
210 4fk1_A Putative thioredoxin re 98.5 1.2E-06 4E-11 71.1 10.4 100 137-238 7-120 (304)
211 2ivd_A PPO, PPOX, protoporphyr 98.4 1.1E-07 3.9E-12 82.2 4.5 52 180-234 239-293 (478)
212 4eqs_A Coenzyme A disulfide re 98.4 1E-07 3.4E-12 81.5 4.1 101 138-238 2-119 (437)
213 1i8t_A UDP-galactopyranose mut 98.4 1.6E-07 5.4E-12 78.3 5.1 41 13-53 1-42 (367)
214 1trb_A Thioredoxin reductase; 98.4 9.4E-07 3.2E-11 72.1 9.7 98 137-238 6-119 (320)
215 1xhc_A NADH oxidase /nitrite r 98.4 3.4E-07 1.2E-11 76.3 7.1 98 135-238 7-116 (367)
216 3iwa_A FAD-dependent pyridine 98.4 8.6E-07 2.9E-11 76.5 9.7 103 136-238 3-128 (472)
217 3ntd_A FAD-dependent pyridine 98.4 4.5E-07 1.5E-11 80.1 8.1 102 137-238 2-120 (565)
218 3cty_A Thioredoxin reductase; 98.4 1.1E-06 3.8E-11 71.7 9.9 98 136-237 16-128 (319)
219 3fg2_P Putative rubredoxin red 98.4 5.6E-07 1.9E-11 76.1 8.2 100 136-238 1-113 (404)
220 3lxd_A FAD-dependent pyridine 98.4 5.9E-07 2E-11 76.3 8.2 101 136-238 9-122 (415)
221 2a87_A TRXR, TR, thioredoxin r 98.4 1.8E-06 6.1E-11 71.1 10.7 99 136-238 14-129 (335)
222 1nhp_A NADH peroxidase; oxidor 98.4 1E-06 3.5E-11 75.5 9.5 102 137-238 1-118 (447)
223 4dsg_A UDP-galactopyranose mut 98.4 1.8E-07 6.3E-12 80.9 4.9 42 12-53 8-51 (484)
224 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.7E-06 5.7E-11 75.6 10.9 101 135-237 211-328 (521)
225 2gqw_A Ferredoxin reductase; f 98.4 1.4E-06 4.6E-11 73.8 9.6 100 136-238 7-116 (408)
226 3r9u_A Thioredoxin reductase; 98.4 1.8E-06 6.2E-11 70.2 10.1 97 136-238 4-121 (315)
227 2cdu_A NADPH oxidase; flavoenz 98.4 7.7E-07 2.6E-11 76.4 7.8 102 137-238 1-120 (452)
228 2bi7_A UDP-galactopyranose mut 98.4 3E-07 1E-11 77.1 5.1 41 13-53 3-44 (384)
229 3lov_A Protoporphyrinogen oxid 98.4 2.2E-07 7.4E-12 80.4 4.1 41 194-235 249-289 (475)
230 2vvm_A Monoamine oxidase N; FA 98.4 2.3E-07 7.9E-12 80.6 4.2 56 180-235 256-312 (495)
231 3jsk_A Cypbp37 protein; octame 98.4 2.7E-07 9.2E-12 75.3 4.3 37 12-48 78-117 (344)
232 3cgb_A Pyridine nucleotide-dis 98.4 1.6E-06 5.5E-11 75.0 9.4 102 137-238 37-155 (480)
233 2bc0_A NADH oxidase; flavoprot 98.3 6.8E-07 2.3E-11 77.6 6.8 102 137-238 36-152 (490)
234 2iid_A L-amino-acid oxidase; f 98.3 3E-07 1E-11 80.0 4.5 42 11-52 31-73 (498)
235 1d5t_A Guanine nucleotide diss 98.3 3.8E-07 1.3E-11 77.8 4.3 57 179-235 234-290 (433)
236 3g3e_A D-amino-acid oxidase; F 98.3 3.5E-07 1.2E-11 75.8 3.7 45 179-235 142-186 (351)
237 3s5w_A L-ornithine 5-monooxyge 98.3 1.4E-06 4.7E-11 75.1 7.6 102 137-238 31-195 (463)
238 2yqu_A 2-oxoglutarate dehydrog 98.3 9.5E-07 3.2E-11 75.9 6.2 95 13-116 167-267 (455)
239 4gcm_A TRXR, thioredoxin reduc 98.3 6.2E-06 2.1E-10 67.1 10.2 100 137-240 7-121 (312)
240 2gjc_A Thiazole biosynthetic e 98.2 6.5E-07 2.2E-11 72.6 3.8 37 12-48 64-103 (326)
241 1m6i_A Programmed cell death p 98.2 1.9E-06 6.4E-11 74.8 6.8 99 136-237 11-146 (493)
242 1chu_A Protein (L-aspartate ox 98.2 8.3E-07 2.8E-11 77.8 4.5 37 12-48 7-43 (540)
243 2bs2_A Quinol-fumarate reducta 98.2 8.5E-07 2.9E-11 79.3 4.2 35 13-47 5-40 (660)
244 1w4x_A Phenylacetone monooxyge 98.2 1E-05 3.4E-10 71.1 10.9 96 137-234 17-153 (542)
245 4g6h_A Rotenone-insensitive NA 98.2 2.7E-06 9.1E-11 73.9 7.1 100 136-238 42-172 (502)
246 1ges_A Glutathione reductase; 98.2 2.5E-06 8.5E-11 73.2 6.5 93 13-116 167-268 (450)
247 2eq6_A Pyruvate dehydrogenase 98.2 2.3E-06 7.8E-11 73.7 6.3 94 13-117 169-275 (464)
248 3c4a_A Probable tryptophan hyd 98.2 1E-06 3.5E-11 73.9 4.0 34 14-47 1-37 (381)
249 1lvl_A Dihydrolipoamide dehydr 98.2 2.7E-06 9.1E-11 73.2 6.4 94 13-117 171-272 (458)
250 3g5s_A Methylenetetrahydrofola 98.1 1.6E-06 5.5E-11 71.6 4.5 34 13-46 1-35 (443)
251 2v3a_A Rubredoxin reductase; a 98.1 3.6E-06 1.2E-10 70.6 6.9 93 13-115 145-245 (384)
252 2z3y_A Lysine-specific histone 98.1 1.4E-06 5E-11 78.2 4.5 42 11-52 105-147 (662)
253 2r9z_A Glutathione amide reduc 98.1 3E-06 1E-10 72.9 6.3 93 13-116 166-267 (463)
254 1b37_A Protein (polyamine oxid 98.1 1.6E-06 5.3E-11 74.9 4.4 54 180-233 207-268 (472)
255 2dkh_A 3-hydroxybenzoate hydro 98.1 1.4E-06 4.7E-11 78.1 4.1 34 13-46 32-67 (639)
256 3ces_A MNMG, tRNA uridine 5-ca 98.1 2.3E-05 7.7E-10 69.4 11.6 98 137-237 29-183 (651)
257 4gut_A Lysine-specific histone 98.1 1.8E-06 6E-11 78.6 4.7 42 192-233 542-583 (776)
258 2pyx_A Tryptophan halogenase; 98.1 1.4E-06 4.9E-11 76.2 3.8 56 180-236 176-234 (526)
259 2xag_A Lysine-specific histone 98.1 1.9E-06 6.6E-11 79.0 4.7 41 11-51 276-317 (852)
260 4g65_A TRK system potassium up 98.1 6.7E-06 2.3E-10 70.4 7.8 34 12-45 2-36 (461)
261 1xdi_A RV3303C-LPDA; reductase 98.1 2.9E-05 9.8E-10 67.5 11.8 100 137-238 3-159 (499)
262 2xdo_A TETX2 protein; tetracyc 98.1 1.5E-05 5E-10 67.2 9.6 99 136-236 26-183 (398)
263 3jsk_A Cypbp37 protein; octame 98.1 1.9E-05 6.3E-10 64.5 9.7 101 136-236 79-252 (344)
264 2h88_A Succinate dehydrogenase 98.1 1.8E-06 6.1E-11 76.7 4.0 34 13-46 18-52 (621)
265 1onf_A GR, grase, glutathione 98.1 9.1E-06 3.1E-10 70.6 8.3 95 13-116 176-278 (500)
266 4b1b_A TRXR, thioredoxin reduc 98.1 5.2E-06 1.8E-10 72.5 6.6 96 12-117 222-323 (542)
267 3cp8_A TRNA uridine 5-carboxym 98.1 3.2E-05 1.1E-09 68.3 11.5 100 134-236 19-175 (641)
268 1dxl_A Dihydrolipoamide dehydr 98.1 1.5E-05 5.1E-10 68.7 9.3 98 136-238 6-154 (470)
269 2vdc_G Glutamate synthase [NAD 98.1 5.7E-06 1.9E-10 70.9 6.3 89 135-234 121-218 (456)
270 1zmd_A Dihydrolipoyl dehydroge 98.1 1.9E-05 6.4E-10 68.2 9.6 97 137-238 7-155 (474)
271 1pn0_A Phenol 2-monooxygenase; 98.0 2.1E-06 7.2E-11 77.1 3.5 34 13-46 8-47 (665)
272 1ebd_A E3BD, dihydrolipoamide 98.0 1.8E-05 6.1E-10 68.0 9.1 96 137-238 4-148 (455)
273 2zxi_A TRNA uridine 5-carboxym 98.0 5.1E-05 1.7E-09 66.9 11.8 99 136-237 27-182 (637)
274 1v59_A Dihydrolipoamide dehydr 98.0 2.3E-05 7.8E-10 67.7 9.5 94 137-235 6-157 (478)
275 3l8k_A Dihydrolipoyl dehydroge 98.0 1.4E-05 4.8E-10 68.8 8.1 97 137-238 5-147 (466)
276 2qae_A Lipoamide, dihydrolipoy 98.0 1.8E-05 6.1E-10 68.2 8.7 97 137-238 3-151 (468)
277 3gyx_A Adenylylsulfate reducta 98.0 2.5E-06 8.4E-11 76.3 3.3 34 13-46 22-62 (662)
278 3t37_A Probable dehydrogenase; 98.0 3.5E-06 1.2E-10 73.8 4.2 36 12-47 16-53 (526)
279 2a8x_A Dihydrolipoyl dehydroge 98.0 2.3E-05 7.7E-10 67.5 9.2 95 137-237 4-148 (464)
280 3ic9_A Dihydrolipoamide dehydr 98.0 1.4E-05 4.9E-10 69.2 7.9 94 13-117 174-278 (492)
281 1jnr_A Adenylylsulfate reducta 98.0 4.7E-06 1.6E-10 74.6 4.7 35 12-46 21-60 (643)
282 1y56_A Hypothetical protein PH 98.0 8E-06 2.7E-10 70.8 5.9 99 136-238 108-222 (493)
283 1ojt_A Surface protein; redox- 98.0 1.8E-05 6.1E-10 68.5 7.8 96 137-237 7-162 (482)
284 3urh_A Dihydrolipoyl dehydroge 97.9 9.3E-05 3.2E-09 64.1 12.1 95 136-235 25-170 (491)
285 1kdg_A CDH, cellobiose dehydro 97.9 5.5E-06 1.9E-10 72.8 4.2 36 12-47 6-42 (546)
286 1cjc_A Protein (adrenodoxin re 97.9 8E-06 2.7E-10 70.1 5.1 92 135-235 5-106 (460)
287 2hqm_A GR, grase, glutathione 97.9 0.0001 3.6E-09 63.6 11.9 97 136-238 11-163 (479)
288 4hb9_A Similarities with proba 97.9 0.00012 4.1E-09 61.6 12.0 96 138-235 3-166 (412)
289 3o0h_A Glutathione reductase; 97.9 2.8E-05 9.5E-10 67.3 8.0 94 13-117 191-292 (484)
290 1lqt_A FPRA; NADP+ derivative, 97.9 5.3E-06 1.8E-10 71.2 3.3 90 136-234 3-107 (456)
291 3ayj_A Pro-enzyme of L-phenyla 97.9 4.4E-06 1.5E-10 74.8 2.5 35 13-47 56-100 (721)
292 1mo9_A ORF3; nucleotide bindin 97.9 1.8E-05 6.2E-10 69.1 6.3 92 14-116 215-319 (523)
293 1zk7_A HGII, reductase, mercur 97.9 6.7E-05 2.3E-09 64.6 9.4 98 136-238 4-153 (467)
294 1ju2_A HydroxynitrIle lyase; f 97.8 8.8E-06 3E-10 71.2 3.8 36 12-47 25-60 (536)
295 2wpf_A Trypanothione reductase 97.8 2.4E-05 8.3E-10 67.8 6.4 93 13-116 191-295 (495)
296 3qvp_A Glucose oxidase; oxidor 97.8 1.2E-05 4.1E-10 70.8 4.3 34 12-45 18-53 (583)
297 1ps9_A 2,4-dienoyl-COA reducta 97.8 5.2E-05 1.8E-09 68.3 8.5 87 136-239 373-471 (671)
298 3q9t_A Choline dehydrogenase a 97.8 1.4E-05 4.9E-10 70.3 4.2 35 12-46 5-41 (577)
299 3dk9_A Grase, GR, glutathione 97.8 8.8E-05 3E-09 64.0 9.1 96 136-238 20-163 (478)
300 3qfa_A Thioredoxin reductase 1 97.8 7.2E-05 2.5E-09 65.3 8.6 97 137-238 33-188 (519)
301 4dna_A Probable glutathione re 97.8 3.7E-05 1.3E-09 66.2 6.6 92 13-116 170-271 (463)
302 3lad_A Dihydrolipoamide dehydr 97.8 7.3E-05 2.5E-09 64.5 8.4 95 137-236 4-155 (476)
303 1gte_A Dihydropyrimidine dehyd 97.8 1.8E-05 6.1E-10 74.6 4.7 92 136-236 187-289 (1025)
304 2gag_A Heterotetrameric sarcos 97.7 0.00014 4.9E-09 68.1 9.7 101 136-238 128-256 (965)
305 2gjc_A Thiazole biosynthetic e 97.7 0.00049 1.7E-08 55.8 11.5 100 136-235 65-239 (326)
306 1fec_A Trypanothione reductase 97.7 0.00019 6.4E-09 62.2 9.4 98 137-238 4-166 (490)
307 3dgz_A Thioredoxin reductase 2 97.7 0.00025 8.5E-09 61.4 10.0 97 137-238 7-162 (488)
308 1vg0_A RAB proteins geranylger 97.7 3.5E-05 1.2E-09 68.2 4.6 56 180-235 379-437 (650)
309 3fim_B ARYL-alcohol oxidase; A 97.6 2.2E-05 7.7E-10 68.9 3.0 35 13-47 2-38 (566)
310 3c4a_A Probable tryptophan hyd 97.6 0.00015 5E-09 60.7 7.8 88 137-235 1-143 (381)
311 1n4w_A CHOD, cholesterol oxida 97.6 3.3E-05 1.1E-09 67.1 3.8 36 13-48 5-41 (504)
312 3k30_A Histamine dehydrogenase 97.6 5.9E-05 2E-09 68.2 5.1 87 136-236 391-489 (690)
313 1coy_A Cholesterol oxidase; ox 97.6 4.2E-05 1.4E-09 66.5 3.8 36 12-47 10-46 (507)
314 3dgh_A TRXR-1, thioredoxin red 97.6 0.00024 8.3E-09 61.4 8.5 98 136-238 9-165 (483)
315 2jbv_A Choline oxidase; alcoho 97.5 7E-05 2.4E-09 65.7 4.8 37 12-48 12-50 (546)
316 1gpe_A Protein (glucose oxidas 97.5 8.1E-05 2.8E-09 65.9 4.1 36 12-47 23-60 (587)
317 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00069 2.3E-08 60.7 9.9 99 137-236 33-212 (639)
318 2x8g_A Thioredoxin glutathione 97.4 0.00047 1.6E-08 61.2 8.6 99 135-238 106-264 (598)
319 2pyx_A Tryptophan halogenase; 97.3 0.003 1E-07 55.2 12.7 37 135-171 6-52 (526)
320 2e5v_A L-aspartate oxidase; ar 97.3 0.00091 3.1E-08 57.6 9.0 54 181-236 121-177 (472)
321 1o94_A Tmadh, trimethylamine d 97.2 0.0002 6.7E-09 65.2 3.9 87 136-236 389-492 (729)
322 3fwz_A Inner membrane protein 97.2 0.00039 1.3E-08 49.2 4.5 37 10-46 4-41 (140)
323 4b63_A L-ornithine N5 monooxyg 97.1 0.0028 9.5E-08 55.0 9.9 102 137-238 40-217 (501)
324 1pn0_A Phenol 2-monooxygenase; 97.1 0.0026 9E-08 57.1 9.8 34 137-170 9-45 (665)
325 2g1u_A Hypothetical protein TM 97.1 0.00046 1.6E-08 49.7 4.0 36 11-46 17-53 (155)
326 4gut_A Lysine-specific histone 97.0 0.0058 2E-07 55.8 11.3 35 137-173 337-371 (776)
327 3llv_A Exopolyphosphatase-rela 96.8 0.0009 3.1E-08 47.3 3.6 33 13-45 6-39 (141)
328 1lss_A TRK system potassium up 96.8 0.0011 3.7E-08 46.6 3.7 33 13-45 4-37 (140)
329 3ic5_A Putative saccharopine d 96.7 0.0011 3.8E-08 45.0 3.3 33 13-45 5-39 (118)
330 1id1_A Putative potassium chan 96.6 0.0023 7.9E-08 45.8 4.7 33 13-45 3-36 (153)
331 3pid_A UDP-glucose 6-dehydroge 96.5 0.0021 7.3E-08 54.2 4.5 38 9-46 32-69 (432)
332 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.0034 1.2E-07 47.9 4.9 34 12-45 30-64 (223)
333 2h88_A Succinate dehydrogenase 96.5 0.027 9.2E-07 50.1 11.3 56 180-235 156-217 (621)
334 2vvm_A Monoamine oxidase N; FA 96.3 0.0065 2.2E-07 52.5 6.6 39 14-52 40-79 (495)
335 1kyq_A Met8P, siroheme biosynt 96.3 0.0022 7.5E-08 50.6 3.0 34 12-45 12-46 (274)
336 2hmt_A YUAA protein; RCK, KTN, 96.3 0.0032 1.1E-07 44.3 3.6 33 13-45 6-39 (144)
337 1pzg_A LDH, lactate dehydrogen 96.2 0.0043 1.5E-07 50.7 4.4 38 9-46 5-44 (331)
338 1f0y_A HCDH, L-3-hydroxyacyl-C 96.2 0.0044 1.5E-07 49.9 4.4 35 12-46 14-49 (302)
339 3lk7_A UDP-N-acetylmuramoylala 96.2 0.021 7.1E-07 48.8 8.7 83 135-241 8-90 (451)
340 1chu_A Protein (L-aspartate ox 96.2 0.013 4.5E-07 51.2 7.6 49 187-235 146-208 (540)
341 2x5o_A UDP-N-acetylmuramoylala 96.1 0.0032 1.1E-07 53.6 3.4 34 13-46 5-39 (439)
342 4dio_A NAD(P) transhydrogenase 96.1 0.0047 1.6E-07 51.4 4.3 34 13-46 190-224 (405)
343 3lk7_A UDP-N-acetylmuramoylala 96.1 0.0039 1.3E-07 53.3 3.9 33 13-45 9-42 (451)
344 3c85_A Putative glutathione-re 96.1 0.0064 2.2E-07 44.9 4.4 33 13-45 39-73 (183)
345 3i83_A 2-dehydropantoate 2-red 96.1 0.0049 1.7E-07 50.1 4.1 33 13-45 2-35 (320)
346 3l4b_C TRKA K+ channel protien 96.0 0.004 1.4E-07 47.5 3.3 33 14-46 1-34 (218)
347 3fpz_A Thiazole biosynthetic e 96.0 0.012 4.2E-07 47.8 6.4 39 135-173 64-102 (326)
348 3p2y_A Alanine dehydrogenase/p 96.0 0.0051 1.8E-07 50.8 4.0 34 13-46 184-218 (381)
349 3k96_A Glycerol-3-phosphate de 96.0 0.0075 2.6E-07 49.7 5.0 38 9-46 25-63 (356)
350 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.028 9.6E-07 42.8 7.5 74 135-235 30-103 (223)
351 3hn2_A 2-dehydropantoate 2-red 95.9 0.0058 2E-07 49.4 3.7 33 13-45 2-35 (312)
352 3ado_A Lambda-crystallin; L-gu 95.8 0.006 2E-07 49.3 3.6 34 13-46 6-40 (319)
353 3qha_A Putative oxidoreductase 95.8 0.0085 2.9E-07 48.1 4.5 34 13-46 15-49 (296)
354 1lld_A L-lactate dehydrogenase 95.6 0.0092 3.2E-07 48.4 4.0 33 13-45 7-42 (319)
355 3oj0_A Glutr, glutamyl-tRNA re 95.6 0.0087 3E-07 42.3 3.4 33 13-45 21-54 (144)
356 1d5t_A Guanine nucleotide diss 95.6 0.0061 2.1E-07 51.8 2.9 44 12-55 5-49 (433)
357 3g17_A Similar to 2-dehydropan 95.6 0.0082 2.8E-07 48.1 3.5 33 13-45 2-35 (294)
358 4ezb_A Uncharacterized conserv 95.5 0.0086 2.9E-07 48.6 3.5 36 10-45 21-58 (317)
359 3doj_A AT3G25530, dehydrogenas 95.5 0.011 3.8E-07 47.8 4.1 37 10-46 18-55 (310)
360 4e12_A Diketoreductase; oxidor 95.5 0.012 4.2E-07 46.8 4.3 34 13-46 4-38 (283)
361 2ewd_A Lactate dehydrogenase,; 95.5 0.014 4.6E-07 47.4 4.4 34 13-46 4-39 (317)
362 1x13_A NAD(P) transhydrogenase 95.5 0.011 3.9E-07 49.5 4.0 34 13-46 172-206 (401)
363 3ggo_A Prephenate dehydrogenas 95.5 0.013 4.6E-07 47.3 4.4 33 13-45 33-68 (314)
364 3eag_A UDP-N-acetylmuramate:L- 95.5 0.011 3.9E-07 48.0 4.0 34 13-46 4-39 (326)
365 2ew2_A 2-dehydropantoate 2-red 95.5 0.011 3.8E-07 47.7 3.9 32 14-45 4-36 (316)
366 3eag_A UDP-N-acetylmuramate:L- 95.4 0.065 2.2E-06 43.6 8.4 81 135-241 3-84 (326)
367 3gg2_A Sugar dehydrogenase, UD 95.3 0.013 4.4E-07 49.9 4.1 33 14-46 3-36 (450)
368 1l7d_A Nicotinamide nucleotide 95.3 0.015 5E-07 48.6 4.3 35 12-46 171-206 (384)
369 1ks9_A KPA reductase;, 2-dehyd 95.3 0.014 4.9E-07 46.4 4.0 32 15-46 2-34 (291)
370 2a9f_A Putative malic enzyme ( 95.3 0.015 5E-07 48.1 4.0 34 12-45 187-222 (398)
371 3ego_A Probable 2-dehydropanto 95.3 0.017 5.8E-07 46.6 4.4 33 13-45 2-34 (307)
372 4ffl_A PYLC; amino acid, biosy 95.3 0.014 4.9E-07 48.2 4.0 34 13-46 1-35 (363)
373 2raf_A Putative dinucleotide-b 95.3 0.017 5.7E-07 43.8 4.1 34 13-46 19-53 (209)
374 1jnr_A Adenylylsulfate reducta 95.2 0.12 4.2E-06 46.2 10.2 54 182-235 154-218 (643)
375 3kkj_A Amine oxidase, flavin-c 95.2 0.019 6.6E-07 44.9 4.6 35 137-173 3-37 (336)
376 2uyy_A N-PAC protein; long-cha 95.2 0.018 6.2E-07 46.6 4.4 34 13-46 30-64 (316)
377 3ghy_A Ketopantoate reductase 95.2 0.019 6.3E-07 47.0 4.4 31 14-44 4-35 (335)
378 1y6j_A L-lactate dehydrogenase 95.1 0.018 6.2E-07 46.6 4.2 34 12-45 6-42 (318)
379 2bcg_G Secretory pathway GDP d 95.1 0.022 7.6E-07 48.6 4.8 42 12-53 10-52 (453)
380 3abi_A Putative uncharacterize 95.1 0.02 6.8E-07 47.4 4.4 37 9-45 12-48 (365)
381 1vl6_A Malate oxidoreductase; 95.1 0.018 6.3E-07 47.4 4.0 33 12-44 191-225 (388)
382 2hjr_A Malate dehydrogenase; m 95.0 0.021 7.1E-07 46.5 4.3 34 13-46 14-49 (328)
383 2y0c_A BCEC, UDP-glucose dehyd 95.0 0.018 6.1E-07 49.5 4.1 33 13-45 8-41 (478)
384 3vtf_A UDP-glucose 6-dehydroge 95.0 0.022 7.4E-07 48.2 4.4 36 10-45 18-54 (444)
385 3pqe_A L-LDH, L-lactate dehydr 95.0 0.022 7.6E-07 46.2 4.3 34 12-45 4-40 (326)
386 1evy_A Glycerol-3-phosphate de 95.0 0.018 6.2E-07 47.6 3.9 31 15-45 17-48 (366)
387 3tl2_A Malate dehydrogenase; c 95.0 0.021 7.3E-07 46.1 4.1 34 12-45 7-42 (315)
388 1t2d_A LDH-P, L-lactate dehydr 94.9 0.024 8.3E-07 46.0 4.4 34 13-46 4-39 (322)
389 3l9w_A Glutathione-regulated p 94.9 0.022 7.5E-07 48.0 4.2 34 13-46 4-38 (413)
390 1jw9_B Molybdopterin biosynthe 94.9 0.022 7.6E-07 44.3 4.0 34 13-46 31-66 (249)
391 2dpo_A L-gulonate 3-dehydrogen 94.9 0.024 8.2E-07 45.9 4.1 34 13-46 6-40 (319)
392 3ius_A Uncharacterized conserv 94.9 0.025 8.6E-07 44.8 4.3 34 12-45 4-38 (286)
393 3g0o_A 3-hydroxyisobutyrate de 94.8 0.024 8.1E-07 45.6 4.1 34 13-46 7-41 (303)
394 1pjc_A Protein (L-alanine dehy 94.8 0.021 7E-07 47.3 3.7 33 13-45 167-200 (361)
395 1bg6_A N-(1-D-carboxylethyl)-L 94.8 0.024 8E-07 46.7 4.1 32 14-45 5-37 (359)
396 1yj8_A Glycerol-3-phosphate de 94.7 0.02 6.8E-07 47.6 3.5 34 13-46 21-62 (375)
397 1ur5_A Malate dehydrogenase; o 94.7 0.027 9.3E-07 45.4 4.1 33 14-46 3-37 (309)
398 1dlj_A UDP-glucose dehydrogena 94.7 0.029 9.8E-07 47.1 4.4 31 15-45 2-32 (402)
399 1guz_A Malate dehydrogenase; o 94.7 0.025 8.7E-07 45.6 3.9 33 14-46 1-36 (310)
400 2aef_A Calcium-gated potassium 94.6 0.02 6.9E-07 44.1 3.1 33 13-46 9-42 (234)
401 2v6b_A L-LDH, L-lactate dehydr 94.6 0.027 9.1E-07 45.3 3.9 32 14-45 1-35 (304)
402 3pdu_A 3-hydroxyisobutyrate de 94.5 0.026 9.1E-07 44.9 3.7 33 14-46 2-35 (287)
403 2eez_A Alanine dehydrogenase; 94.5 0.029 1E-06 46.5 4.0 33 13-45 166-199 (369)
404 2vhw_A Alanine dehydrogenase; 94.5 0.03 1E-06 46.6 4.0 34 12-45 167-201 (377)
405 1pjq_A CYSG, siroheme synthase 94.5 0.024 8E-07 48.5 3.4 33 13-45 12-45 (457)
406 4a7p_A UDP-glucose dehydrogena 94.4 0.033 1.1E-06 47.3 4.2 34 13-46 8-42 (446)
407 3pef_A 6-phosphogluconate dehy 94.4 0.031 1.1E-06 44.5 3.8 33 14-46 2-35 (287)
408 3l6d_A Putative oxidoreductase 94.4 0.044 1.5E-06 44.1 4.7 35 12-46 8-43 (306)
409 3c24_A Putative oxidoreductase 94.4 0.038 1.3E-06 44.0 4.3 33 13-45 11-45 (286)
410 2vns_A Metalloreductase steap3 94.4 0.036 1.2E-06 42.1 4.0 33 13-45 28-61 (215)
411 4e21_A 6-phosphogluconate dehy 94.4 0.034 1.2E-06 45.8 4.1 36 11-46 20-56 (358)
412 1zcj_A Peroxisomal bifunctiona 94.4 0.041 1.4E-06 47.1 4.7 34 13-46 37-71 (463)
413 3dtt_A NADP oxidoreductase; st 94.4 0.034 1.2E-06 43.1 3.9 35 12-46 18-53 (245)
414 4g65_A TRK system potassium up 94.4 0.046 1.6E-06 46.7 5.0 36 11-46 233-268 (461)
415 4dll_A 2-hydroxy-3-oxopropiona 94.4 0.034 1.2E-06 45.1 4.0 35 12-46 30-65 (320)
416 4e4t_A Phosphoribosylaminoimid 94.4 0.039 1.3E-06 46.6 4.4 37 10-46 32-69 (419)
417 1z82_A Glycerol-3-phosphate de 94.4 0.034 1.2E-06 45.4 4.0 34 12-45 13-47 (335)
418 2i6t_A Ubiquitin-conjugating e 94.3 0.038 1.3E-06 44.3 4.1 34 13-46 14-50 (303)
419 2pv7_A T-protein [includes: ch 94.3 0.055 1.9E-06 43.3 5.1 35 12-46 20-56 (298)
420 3k6j_A Protein F01G10.3, confi 94.3 0.04 1.4E-06 46.8 4.4 34 13-46 54-88 (460)
421 4huj_A Uncharacterized protein 94.3 0.023 7.9E-07 43.3 2.7 34 13-46 23-58 (220)
422 1b37_A Protein (polyamine oxid 94.3 0.035 1.2E-06 47.6 4.1 41 13-53 4-46 (472)
423 3phh_A Shikimate dehydrogenase 94.3 0.043 1.5E-06 43.1 4.2 34 13-46 118-152 (269)
424 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.03 1E-06 47.6 3.5 31 15-45 2-33 (436)
425 1nyt_A Shikimate 5-dehydrogena 94.2 0.043 1.5E-06 43.3 4.1 33 13-45 119-152 (271)
426 3hwr_A 2-dehydropantoate 2-red 94.2 0.039 1.3E-06 44.7 3.9 33 12-45 18-51 (318)
427 3gvi_A Malate dehydrogenase; N 94.1 0.049 1.7E-06 44.2 4.3 34 13-46 7-42 (324)
428 2qyt_A 2-dehydropantoate 2-red 94.1 0.031 1.1E-06 45.1 3.2 33 11-43 6-45 (317)
429 2h78_A Hibadh, 3-hydroxyisobut 94.0 0.038 1.3E-06 44.4 3.6 34 13-46 3-37 (302)
430 1vpd_A Tartronate semialdehyde 94.0 0.037 1.3E-06 44.3 3.5 34 13-46 5-39 (299)
431 3qsg_A NAD-binding phosphogluc 94.0 0.043 1.5E-06 44.3 3.8 33 13-45 24-58 (312)
432 1txg_A Glycerol-3-phosphate de 94.0 0.043 1.5E-06 44.6 3.9 29 15-43 2-31 (335)
433 1zej_A HBD-9, 3-hydroxyacyl-CO 94.0 0.056 1.9E-06 43.1 4.4 34 13-46 12-45 (293)
434 1hyh_A L-hicdh, L-2-hydroxyiso 94.0 0.046 1.6E-06 44.0 4.0 32 14-45 2-36 (309)
435 3g79_A NDP-N-acetyl-D-galactos 93.9 0.05 1.7E-06 46.6 4.3 35 12-46 17-54 (478)
436 2egg_A AROE, shikimate 5-dehyd 93.9 0.06 2.1E-06 43.1 4.5 33 13-45 141-175 (297)
437 3orq_A N5-carboxyaminoimidazol 93.9 0.052 1.8E-06 45.1 4.3 35 12-46 11-46 (377)
438 4dgk_A Phytoene dehydrogenase; 93.9 0.045 1.5E-06 47.3 4.1 36 137-174 2-37 (501)
439 1a5z_A L-lactate dehydrogenase 93.9 0.047 1.6E-06 44.2 3.9 32 14-45 1-35 (319)
440 2rir_A Dipicolinate synthase, 93.9 0.049 1.7E-06 43.7 4.0 34 12-45 156-190 (300)
441 3ldh_A Lactate dehydrogenase; 93.9 0.065 2.2E-06 43.4 4.6 34 12-45 20-56 (330)
442 3d4o_A Dipicolinate synthase s 93.8 0.051 1.7E-06 43.4 3.9 34 12-45 154-188 (293)
443 3mog_A Probable 3-hydroxybutyr 93.8 0.06 2.1E-06 46.3 4.5 34 13-46 5-39 (483)
444 1jay_A Coenzyme F420H2:NADP+ o 93.7 0.06 2E-06 40.6 4.0 31 15-45 2-34 (212)
445 1oju_A MDH, malate dehydrogena 93.7 0.042 1.4E-06 43.9 3.3 33 14-46 1-36 (294)
446 2ahr_A Putative pyrroline carb 93.7 0.07 2.4E-06 41.7 4.5 33 13-45 3-36 (259)
447 3cky_A 2-hydroxymethyl glutara 93.7 0.049 1.7E-06 43.6 3.6 33 13-45 4-37 (301)
448 2izz_A Pyrroline-5-carboxylate 93.6 0.059 2E-06 43.7 4.1 34 13-46 22-60 (322)
449 3e8x_A Putative NAD-dependent 93.6 0.054 1.9E-06 41.6 3.6 35 12-46 20-56 (236)
450 3dhn_A NAD-dependent epimerase 93.6 0.057 2E-06 41.1 3.7 34 13-46 4-39 (227)
451 3gvp_A Adenosylhomocysteinase 93.5 0.052 1.8E-06 45.5 3.6 34 12-45 219-253 (435)
452 3vku_A L-LDH, L-lactate dehydr 93.5 0.071 2.4E-06 43.2 4.3 34 12-45 8-44 (326)
453 3ond_A Adenosylhomocysteinase; 93.5 0.064 2.2E-06 45.8 4.2 34 12-45 264-298 (488)
454 3gpi_A NAD-dependent epimerase 93.5 0.075 2.6E-06 42.1 4.5 34 13-46 3-37 (286)
455 2iid_A L-amino-acid oxidase; f 93.5 0.16 5.4E-06 43.8 6.8 61 135-197 32-110 (498)
456 4hv4_A UDP-N-acetylmuramate--L 93.5 0.26 9E-06 42.5 8.1 79 134-241 20-99 (494)
457 1ldn_A L-lactate dehydrogenase 93.5 0.072 2.5E-06 43.1 4.3 33 13-45 6-41 (316)
458 3gt0_A Pyrroline-5-carboxylate 93.4 0.079 2.7E-06 41.1 4.4 34 13-46 2-40 (247)
459 2x4g_A Nucleoside-diphosphate- 93.4 0.068 2.3E-06 43.5 4.2 34 13-46 13-48 (342)
460 1kjq_A GART 2, phosphoribosylg 93.4 0.081 2.8E-06 44.1 4.7 39 8-46 6-45 (391)
461 3p7m_A Malate dehydrogenase; p 93.4 0.076 2.6E-06 43.0 4.3 34 13-46 5-40 (321)
462 3dfu_A Uncharacterized protein 93.4 0.02 6.8E-07 43.9 0.8 33 12-44 5-38 (232)
463 3don_A Shikimate dehydrogenase 93.4 0.067 2.3E-06 42.3 3.8 34 13-46 117-152 (277)
464 3ktd_A Prephenate dehydrogenas 93.3 0.077 2.6E-06 43.3 4.3 33 13-45 8-41 (341)
465 2cvz_A Dehydrogenase, 3-hydrox 93.3 0.076 2.6E-06 42.2 4.2 33 14-46 2-34 (289)
466 1p77_A Shikimate 5-dehydrogena 93.3 0.048 1.6E-06 43.1 2.9 33 13-45 119-152 (272)
467 3nep_X Malate dehydrogenase; h 93.3 0.073 2.5E-06 42.9 4.0 33 14-46 1-36 (314)
468 2f1k_A Prephenate dehydrogenas 93.3 0.07 2.4E-06 42.2 3.9 31 15-45 2-33 (279)
469 3q2o_A Phosphoribosylaminoimid 93.3 0.076 2.6E-06 44.3 4.3 35 12-46 13-48 (389)
470 2g5c_A Prephenate dehydrogenas 93.3 0.076 2.6E-06 42.0 4.1 32 14-45 2-36 (281)
471 1yqg_A Pyrroline-5-carboxylate 93.2 0.072 2.5E-06 41.7 3.9 31 15-45 2-34 (263)
472 2o3j_A UDP-glucose 6-dehydroge 93.1 0.072 2.5E-06 45.8 4.0 33 13-45 9-44 (481)
473 1edz_A 5,10-methylenetetrahydr 93.1 0.084 2.9E-06 42.5 4.1 34 12-45 176-211 (320)
474 3ce6_A Adenosylhomocysteinase; 93.1 0.079 2.7E-06 45.5 4.2 34 12-45 273-307 (494)
475 2gf2_A Hibadh, 3-hydroxyisobut 93.1 0.075 2.6E-06 42.4 3.8 32 15-46 2-34 (296)
476 3c7a_A Octopine dehydrogenase; 93.0 0.067 2.3E-06 44.9 3.6 30 14-43 3-34 (404)
477 2rcy_A Pyrroline carboxylate r 93.0 0.09 3.1E-06 41.1 4.1 33 14-46 5-42 (262)
478 2hk9_A Shikimate dehydrogenase 93.0 0.083 2.9E-06 41.8 3.9 33 13-45 129-162 (275)
479 3oz2_A Digeranylgeranylglycero 92.9 0.11 3.7E-06 43.0 4.8 34 138-173 6-39 (397)
480 1gpj_A Glutamyl-tRNA reductase 92.9 0.091 3.1E-06 44.1 4.2 34 12-45 166-201 (404)
481 3d0o_A L-LDH 1, L-lactate dehy 92.9 0.1 3.4E-06 42.2 4.3 33 13-45 6-41 (317)
482 4id9_A Short-chain dehydrogena 92.9 0.086 2.9E-06 43.0 4.0 36 11-46 17-54 (347)
483 4gx0_A TRKA domain protein; me 92.9 0.087 3E-06 46.3 4.2 34 14-47 349-383 (565)
484 1ez4_A Lactate dehydrogenase; 92.9 0.095 3.3E-06 42.4 4.1 33 13-45 5-40 (318)
485 4gde_A UDP-galactopyranose mut 92.9 0.14 4.6E-06 44.3 5.4 38 137-175 11-48 (513)
486 2vou_A 2,6-dihydroxypyridine h 92.8 0.2 7E-06 41.7 6.3 36 136-173 5-40 (397)
487 4gwg_A 6-phosphogluconate dehy 92.8 0.11 3.6E-06 44.7 4.5 34 13-46 4-38 (484)
488 2wtb_A MFP2, fatty acid multif 92.8 0.12 4E-06 46.9 5.0 34 13-46 312-346 (725)
489 3ew7_A LMO0794 protein; Q8Y8U8 92.8 0.093 3.2E-06 39.6 3.8 31 15-45 2-34 (221)
490 2zyd_A 6-phosphogluconate dehy 92.8 0.11 3.8E-06 44.6 4.6 33 13-45 15-48 (480)
491 1leh_A Leucine dehydrogenase; 92.7 0.1 3.5E-06 43.0 4.2 34 12-45 172-206 (364)
492 1vg0_A RAB proteins geranylger 92.7 0.23 7.8E-06 44.2 6.6 42 12-53 7-49 (650)
493 1x0v_A GPD-C, GPDH-C, glycerol 92.7 0.057 1.9E-06 44.4 2.7 33 14-46 9-49 (354)
494 4aj2_A L-lactate dehydrogenase 92.7 0.11 3.7E-06 42.2 4.2 35 11-45 17-54 (331)
495 3jyo_A Quinate/shikimate dehyd 92.7 0.11 3.8E-06 41.2 4.2 34 12-45 126-161 (283)
496 3i3l_A Alkylhalidase CMLS; fla 92.7 0.21 7.1E-06 44.2 6.3 35 136-172 23-57 (591)
497 2q3e_A UDP-glucose 6-dehydroge 92.6 0.091 3.1E-06 45.0 3.9 33 13-45 5-40 (467)
498 3rui_A Ubiquitin-like modifier 92.6 0.11 3.7E-06 42.2 4.1 34 13-46 34-69 (340)
499 2qrj_A Saccharopine dehydrogen 92.6 0.11 3.7E-06 43.1 4.2 34 12-45 213-251 (394)
500 1nvt_A Shikimate 5'-dehydrogen 92.6 0.13 4.3E-06 41.0 4.5 32 13-45 128-160 (287)
No 1
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=6.6e-38 Score=266.73 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=202.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCc--EEEEcCCCCcccchhhhhh-hcCCccccccccccccccc--cceEEee-eee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SAD--VTLIDPKEYFEITWASLRA-MVEPSFGKRSVINHTDYLV--NGRIVAS-PAI 85 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~--v~vie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~-~v~ 85 (290)
++||+|||||++|+++|.+|++ |++ |+|||+++.+++....+.. ........+......+++. ++++..+ .+.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 4699999999999999999975 766 9999999987654322221 1111111111122222222 4566665 888
Q ss_pred eeecc--eEEecCceEEeccEEEEccCCCCCCC---Cch------HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHH
Q 022896 86 NITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR------TERLNQYQAENQKIKSARSILIVGGGPTGVELAGE 154 (290)
Q Consensus 86 ~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~------~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~ 154 (290)
.+++. .+.+.++.++.||++++|||+.|..| +.. .....+.......+..+++++|+|+|.+++|+|..
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATT 161 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHH
Confidence 88876 68888888999999999999986554 311 12344444444455678999999999999999999
Q ss_pred HhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCC
Q 022896 155 IAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 155 l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
+.. .+.+|+++++.+.++.. +++.+.+.+.+.+++.||++++++.|++++.++....+.+.+|+++++|.||+|+|.
T Consensus 162 l~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 162 ARK--LGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHH--TTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred HHh--CCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 987 58999999999887654 778899999999999999999999999988766556788889999999999999999
Q ss_pred CCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 234 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
+|+.++++..++.. + + .+.||+++++ +.|+|||+|||+..+..
T Consensus 240 ~p~~~l~~~~gl~~--~-~-gi~vd~~~~t-~~~~IyA~GD~a~~~~~ 282 (410)
T 3ef6_A 240 EPADQLARQAGLAC--D-R-GVIVDHCGAT-LAKGVFAVGDVASWPLR 282 (410)
T ss_dssp EECCHHHHHTTCCB--S-S-SEECCTTSBC-SSTTEEECGGGEEEEBT
T ss_pred eecHHHHHhCCCcc--C-C-eEEEccCeeE-CCCCEEEEEcceeccCC
Confidence 99999998887743 3 4 4999999998 79999999999987764
No 2
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.3e-37 Score=262.43 Aligned_cols=263 Identities=19% Similarity=0.226 Sum_probs=205.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCc--EEEEcCCCCcccchhhhh-hhcCCc-cccccccccccccc--cceEEee-e
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SAD--VTLIDPKEYFEITWASLR-AMVEPS-FGKRSVINHTDYLV--NGRIVAS-P 83 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~--v~vie~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~ 83 (290)
+++||+|||||++|+++|.+|++ |++ |+|||+++.+++....+. ...... ..........+++. ++++..+ .
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 46899999999999999999975 766 999999998765433332 122111 11121222222222 4566655 8
Q ss_pred eeeeecc--eEEecCceEEeccEEEEccCCCCCCCC---c------hHHHHHHHHHHHHHHhc-CCeEEEEcCchhHHHH
Q 022896 84 AINITEN--EVLTAEGRRVVYDYLVIATGHKDPVPK---T------RTERLNQYQAENQKIKS-ARSILIVGGGPTGVEL 151 (290)
Q Consensus 84 v~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~---~------~~~~~~~~~~~~~~~~~-~~~v~iiG~g~~~~~~ 151 (290)
+..+++. .+.+.++..+.||++++|||+.|..|+ . ......++......+.. +++++|+|+|.+++|+
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~ 167 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEA 167 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHH
Confidence 8888876 688888889999999999999876543 1 11234444555555566 8999999999999999
Q ss_pred HHHHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEE
Q 022896 152 AGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFL 229 (290)
Q Consensus 152 a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~ 229 (290)
|..+.. .+.+|+++++.+.++.. +++.+.+.+.+.+++.|++++.++.|+++..+++. ..+.+.+|+++++|.||+
T Consensus 168 A~~l~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 168 AAVLTK--FGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIV 245 (415)
T ss_dssp HHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEE
T ss_pred HHHHHh--cCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 999987 58999999999988764 78889999999999999999999999999876655 468888999999999999
Q ss_pred ccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 230 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 230 a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
|+|.+|+.++++..++.. + +| +.||+++++ +.|+|||+|||+..+..
T Consensus 246 a~G~~p~~~l~~~~gl~~--~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~ 292 (415)
T 3lxd_A 246 GIGIVPCVGALISAGASG--G-NG-VDVDEFCRT-SLTDVYAIGDCAAHAND 292 (415)
T ss_dssp CSCCEESCHHHHHTTCCC--S-SS-EECCTTCBC-SSTTEEECGGGEEEECG
T ss_pred CCCCccChHHHHhCCCCc--C-CC-EEECCCCCc-CCCCEEEEEeeeeecCc
Confidence 999999999998877643 3 45 999999998 79999999999998764
No 3
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.8e-37 Score=260.22 Aligned_cols=261 Identities=20% Similarity=0.308 Sum_probs=203.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCCcccchhhhh-hhcCCc-ccccccccccccc--ccceEEeeeeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLR-AMVEPS-FGKRSVINHTDYL--VNGRIVASPAIN 86 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~v~~ 86 (290)
+||+|||||++|+++|.+|++ |+ +|+|||+++.+++....+. ...... ..........+++ .++++....++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~ 81 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMVS 81 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEEE
Confidence 689999999999999999976 77 8999999987665422222 111111 1111122222222 145566688888
Q ss_pred eecc--eEEecCceEEeccEEEEccCCCCCCC---Cch------HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHH
Q 022896 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR------TERLNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155 (290)
Q Consensus 87 ~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~------~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l 155 (290)
+++. .+.+.++..+.||++++|||+.|..| +.. ....++..........+++++|+|+|.+++|+|..+
T Consensus 82 id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l 161 (404)
T 3fg2_P 82 IDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATA 161 (404)
T ss_dssp EETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 8876 68888888999999999999886544 321 123455555556666799999999999999999999
Q ss_pred hhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCC
Q 022896 156 AVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 156 ~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
.. .+.+|+++++.+.++.. +++.+.+.+.+.+++.|++++.++.|+++..+++. ..+.+.+|+++++|.||+|+|.
T Consensus 162 ~~--~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 162 RA--KGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred Hh--CCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 87 48899999999887764 78889999999999999999999999998876555 4578889999999999999999
Q ss_pred CCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 234 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
+|+.++++..++.. + +| +.||+++++ +.|+|||+|||+..+.+
T Consensus 240 ~p~~~l~~~~gl~~--~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~ 282 (404)
T 3fg2_P 240 IPNVEIAAAAGLPT--A-AG-IIVDQQLLT-SDPHISAIGDCALFESV 282 (404)
T ss_dssp EECCHHHHHTTCCB--S-SS-EEECTTSBC-SSTTEEECGGGEEEEET
T ss_pred ccCHHHHHhCCCCC--C-CC-EEECCCccc-CCCCEEEeecceeecCc
Confidence 99999998877743 3 45 999999998 79999999999998764
No 4
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.4e-37 Score=264.89 Aligned_cols=259 Identities=18% Similarity=0.290 Sum_probs=197.0
Q ss_pred cEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCCCcccchhhhhhhcCCccccc---cccccccccc--cceE-Eeeeee
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFGKR---SVINHTDYLV--NGRI-VASPAI 85 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~-~~~~v~ 85 (290)
+|+|||||++|++||.+|++ | .+|+|||+++...+....+........... .......++. ++++ ....|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 69999999999999999975 5 689999999876654433333222211111 1111112221 3444 356788
Q ss_pred eeecc--eEEe-----cCceEEeccEEEEccCCCCCCCCc------hHHHHHHHHHHHHH--HhcCCeEEEEcCchhHHH
Q 022896 86 NITEN--EVLT-----AEGRRVVYDYLVIATGHKDPVPKT------RTERLNQYQAENQK--IKSARSILIVGGGPTGVE 150 (290)
Q Consensus 86 ~~~~~--~v~~-----~~~~~~~~~~vi~a~G~~~~~p~~------~~~~~~~~~~~~~~--~~~~~~v~iiG~g~~~~~ 150 (290)
.++.. .+.. .++.++.||++|+|||++|..|+. ....+.++..+... ...+++++|+|+|..|+|
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E 161 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLE 161 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHH
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhh
Confidence 88765 2222 234578999999999999776652 12233444443333 235789999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEc
Q 022896 151 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 230 (290)
Q Consensus 151 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 230 (290)
+|..+.. .+.+|+++++.+++++.+++++.+.+.+.++++||+++.++.|++++.. .+.+.+|+++++|.|++|
T Consensus 162 ~A~~l~~--~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 162 VLENLYE--RGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp HHHHHHH--HTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEEC
T ss_pred hHHHHHh--cCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEE
Confidence 9999987 4899999999999999999999999999999999999999999776532 467788999999999999
Q ss_pred cCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccccc
Q 022896 231 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 282 (290)
Q Consensus 231 ~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~ 282 (290)
+|..|+.++++..++ +++++|+|.||+++|| ++|||||+|||++.+...
T Consensus 236 ~G~~Pn~~~~~~~gl--~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~ 284 (437)
T 4eqs_A 236 VGTHPNSKFIESSNI--KLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRH 284 (437)
T ss_dssp CCEEESCGGGTTSSC--CCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSS
T ss_pred eceecCcHHHHhhhh--hhccCCcEecCCCccC-CCCCEEEEEEccCccccc
Confidence 999999999988776 5688999999999998 899999999999877643
No 5
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.6e-37 Score=267.37 Aligned_cols=272 Identities=25% Similarity=0.312 Sum_probs=193.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccc----ccccceEEeeeee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTD----YLVNGRIVASPAI 85 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~ 85 (290)
+.+.+|||||||++|+++|..|++ +++|+|||+++++-+.+.................+... ...+++++.+.|+
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~ 119 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEAT 119 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEE
Confidence 346789999999999999999986 89999999999765433221111111111111222222 1235678899999
Q ss_pred eeecc--eEEe--------------------cCceEEeccEEEEccCCCCCC---CCch-----HHHHHHHHHHHH----
Q 022896 86 NITEN--EVLT--------------------AEGRRVVYDYLVIATGHKDPV---PKTR-----TERLNQYQAENQ---- 131 (290)
Q Consensus 86 ~~~~~--~v~~--------------------~~~~~~~~~~vi~a~G~~~~~---p~~~-----~~~~~~~~~~~~---- 131 (290)
.+|++ ++.+ .++.++.||+||+|||+.|.. |+.. ...+.+...+.+
T Consensus 120 ~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~ 199 (502)
T 4g6h_A 120 SINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAA 199 (502)
T ss_dssp EEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHH
T ss_pred EEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHH
Confidence 99876 3432 346789999999999998654 4411 111111111111
Q ss_pred ---H----------HhcCCeEEEEcCchhHHHHHHHHhhhC------------CCCeEEEEecCccccccCChhHHHHHH
Q 022896 132 ---K----------IKSARSILIVGGGPTGVELAGEIAVDF------------PEKKVTLVHKGSRLLEFIGPKAGDKTR 186 (290)
Q Consensus 132 ---~----------~~~~~~v~iiG~g~~~~~~a~~l~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~ 186 (290)
. .....+++|+|+|++|+|+|..+.+.. ...+|++++..+.+++.+++.+.+.+.
T Consensus 200 ~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~ 279 (502)
T 4g6h_A 200 NLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQ 279 (502)
T ss_dssp HHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHH
T ss_pred HHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHH
Confidence 0 112358999999999999999886521 236899999999999999999999999
Q ss_pred HHHHhCCcEEEeCceEeecccCCCceeEEcCCCc----EEeccEEEEccCCCCCchhhccc--ccccccCCCCcEEecCC
Q 022896 187 DWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD----TINADCHFLCTGKPVGSDWLKDT--ILKDSLDTHGMLMVDEN 260 (290)
Q Consensus 187 ~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~----~~~~d~vv~a~G~~~~~~~l~~~--~~~~~~~~~g~~~v~~~ 260 (290)
+.|++.||+++.++.|++++.+.........+|+ ++++|.+|+|+|.+|++ ++... .++...+.+|+|.||++
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~-~~~~l~~~~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP-VITDLFKKIPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCH-HHHHHHHHSGGGTTCCSSEEBCTT
T ss_pred HHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCH-HHHhHHHhccccccCCCceeECCc
Confidence 9999999999999999877644333444566663 69999999999999863 22221 23335577899999999
Q ss_pred ccccCCCCeEEeccccCcccccc
Q 022896 261 LRVKGQKNIFAIGDITDIRVSAS 283 (290)
Q Consensus 261 ~~~~~~~~vfa~Gd~~~~~~~~~ 283 (290)
+|++++|||||+|||+..+.+++
T Consensus 359 lq~~~~~~IfAiGD~a~~~~p~~ 381 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFAGLPPT 381 (502)
T ss_dssp SBBTTCSSEEECGGGEESSSCCC
T ss_pred cccCCCCCEEEEEcccCCCCCCc
Confidence 99989999999999998776554
No 6
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=4.3e-38 Score=270.89 Aligned_cols=261 Identities=19% Similarity=0.245 Sum_probs=197.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh--------------hcC---Ccccc---------c
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA--------------MVE---PSFGK---------R 65 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~--------------~~~---~~~~~---------~ 65 (290)
++||+|||||++|+++|++|++ |++|+|||++ .+|+.|..... ... ..+.. .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 5899999999999999999986 9999999998 45555432100 000 00000 0
Q ss_pred ccc------------cccccc--ccceEEeeeeeeeecceEEecCceEEeccEEEEccCCCCCCCCchH-HHHHHHHHHH
Q 022896 66 SVI------------NHTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT-ERLNQYQAEN 130 (290)
Q Consensus 66 ~~~------------~~~~~~--~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~-~~~~~~~~~~ 130 (290)
.+. .+...+ .+++++.+.+..+++..+.+ ++..+.||++++|||++|..|+..+ ..........
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~~ 161 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVEYGIDSDGFF 161 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCccceecHHHhh
Confidence 000 000111 24677888888888777777 6778999999999999876654221 1111222233
Q ss_pred HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCC
Q 022896 131 QKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 210 (290)
Q Consensus 131 ~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~ 210 (290)
.....+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++.+.+.+.+.+++.|++++.++.|++++.+++
T Consensus 162 ~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 239 (450)
T 1ges_A 162 ALPALPERVAVVGAGYIGVELGGVING--LGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD 239 (450)
T ss_dssp HCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT
T ss_pred hhhhcCCeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 333457899999999999999999987 489999999999888888999999999999999999999999999887654
Q ss_pred c-eeEEcCCCcEEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 211 S-DTYLTSTGDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 211 ~-~~v~~~~g~~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+ ..+.+.+|+++++|.|++|+|.+|+.+++ +..++ +++++|++.||+++|+ +.|+|||+|||++.+.
T Consensus 240 ~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 309 (450)
T 1ges_A 240 GSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGV--KTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAVE 309 (450)
T ss_dssp SCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECSGGGTSCC
T ss_pred cEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCc--eECCCCCEeECCCCcc-CCCCEEEEeccCCCCc
Confidence 4 77888888899999999999999998743 45444 5678899999999997 7999999999997643
No 7
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2.8e-38 Score=274.75 Aligned_cols=265 Identities=23% Similarity=0.239 Sum_probs=198.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc--CCcEEEEc--------CCCCcccchhhhhh----------------------hcCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF--SADVTLID--------PKEYFEITWASLRA----------------------MVEP 60 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie--------~~~~~~~~~~~~~~----------------------~~~~ 60 (290)
++||+|||||++|+++|++|++ |++|+||| +...+|+.|..... .+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5899999999999999999965 99999999 34556655432100 0000
Q ss_pred -----ccccccccc------------ccccc--c-cceEEeeeeeeeecceEEec---C-----ceEEeccEEEEccCCC
Q 022896 61 -----SFGKRSVIN------------HTDYL--V-NGRIVASPAINITENEVLTA---E-----GRRVVYDYLVIATGHK 112 (290)
Q Consensus 61 -----~~~~~~~~~------------~~~~~--~-~~~~~~~~v~~~~~~~v~~~---~-----~~~~~~~~vi~a~G~~ 112 (290)
......+.. +...+ . +++++.+.+..+++..+.+. + +..+.||++|+|||++
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~ 166 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSW 166 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCCC
Confidence 000000000 00111 1 56778888888888777765 4 6789999999999998
Q ss_pred CCCCCchH-HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCccccccCChhHHHHHHHHHH
Q 022896 113 DPVPKTRT-ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWLI 190 (290)
Q Consensus 113 ~~~p~~~~-~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (290)
|..|+..+ ..+............+++++|+|+|.+++|+|..+....+ +.+|+++++.+.+++.+++++...+.+.++
T Consensus 167 p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 246 (495)
T 2wpf_A 167 PQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLT 246 (495)
T ss_dssp ECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHH
T ss_pred cCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHH
Confidence 76654221 1111222222222357899999999999999999987432 889999999999988899999999999999
Q ss_pred hCCcEEEeCceEeecccCCC-ceeEEcCCCcEEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCC
Q 022896 191 SKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQK 267 (290)
Q Consensus 191 ~~gi~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~ 267 (290)
+.||+++.++.|++++.+++ ...+.+.+|+++++|.||+|+|.+|+.+++ +..++ +++++|+|.||+++|+ +.|
T Consensus 247 ~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl--~~~~~G~i~Vd~~~~t-~~~ 323 (495)
T 2wpf_A 247 ANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGV--KLTPKGGVQVDEFSRT-NVP 323 (495)
T ss_dssp HTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTC--CBCTTSSBCCCTTCBC-SST
T ss_pred hCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCc--cCCCCCCEEECCCCcc-CCC
Confidence 99999999999999887654 377888888899999999999999998754 44444 6678899999999998 799
Q ss_pred CeEEeccccCccc
Q 022896 268 NIFAIGDITDIRV 280 (290)
Q Consensus 268 ~vfa~Gd~~~~~~ 280 (290)
+|||+|||++.+.
T Consensus 324 ~IyA~GD~~~~~~ 336 (495)
T 2wpf_A 324 NIYAIGDITDRLM 336 (495)
T ss_dssp TEEECGGGGCSCC
T ss_pred CEEEEeccCCCcc
Confidence 9999999998543
No 8
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=4e-38 Score=273.69 Aligned_cols=267 Identities=18% Similarity=0.182 Sum_probs=201.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhh--------------hhcC--Ccc---------cc
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR--------------AMVE--PSF---------GK 64 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~--------------~~~~--~~~---------~~ 64 (290)
..++||+|||||++|+++|.+|++ |++|+|||++. +|+.+.... .... +.+ ..
T Consensus 6 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 6 VINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 335899999999999999999986 99999999976 554432100 0000 000 00
Q ss_pred ccc-cccc-----------c---ccccceEEeeeeeeeecceEEecCceEEeccEEEEccCCCCCCCCch---HHHHHHH
Q 022896 65 RSV-INHT-----------D---YLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR---TERLNQY 126 (290)
Q Consensus 65 ~~~-~~~~-----------~---~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~~~---~~~~~~~ 126 (290)
..+ .... . .....+++.+.....+...+.+.++.++.||++|+|||++|..|+.. ...+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~ 164 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTN 164 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcH
Confidence 000 0000 0 01123466777777777788888888999999999999999888622 1222223
Q ss_pred HHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecc
Q 022896 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 206 (290)
Q Consensus 127 ~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~ 206 (290)
.........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++. |+++.++.+++++
T Consensus 165 ~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~ 241 (492)
T 3ic9_A 165 DNLFELNDLPKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTI 241 (492)
T ss_dssp HHHTTCSSCCSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEE
T ss_pred HHHhhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEE
Confidence 3333333457999999999999999999997 489999999999998889999999999999988 9999999999998
Q ss_pred cCCCceeEEcC--CC--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEec-CCccccCCCCeEEeccccCcccc
Q 022896 207 VSEGSDTYLTS--TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVD-ENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 207 ~~~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~-~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
.+++++.+.+. +| +++++|.|++|+|..|+.+++.....+++++++|++.|| +++|+ +.|+|||+|||++.+..
T Consensus 242 ~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~~ 320 (492)
T 3ic9_A 242 EKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLTL 320 (492)
T ss_dssp ECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSCS
T ss_pred EcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCcc
Confidence 87777767653 67 589999999999999999884333344577889999999 89998 79999999999987654
Q ss_pred c
Q 022896 282 A 282 (290)
Q Consensus 282 ~ 282 (290)
.
T Consensus 321 ~ 321 (492)
T 3ic9_A 321 L 321 (492)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.4e-37 Score=265.68 Aligned_cols=260 Identities=19% Similarity=0.221 Sum_probs=194.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccc--cccccccccccc--cceE-Eeeeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYLV--NGRI-VASPAI 85 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~-~~~~v~ 85 (290)
+||+|||||++|+++|++|++ +++|+|||+++.+++.............. ........+++. +..+ ....|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 699999999999999999964 89999999999877544333322222111 111111111211 3344 356777
Q ss_pred eeecc--eEEe---cCceEEeccEEEEccCCCCCCCC---ch------HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHH
Q 022896 86 NITEN--EVLT---AEGRRVVYDYLVIATGHKDPVPK---TR------TERLNQYQAENQKIKSARSILIVGGGPTGVEL 151 (290)
Q Consensus 86 ~~~~~--~v~~---~~~~~~~~~~vi~a~G~~~~~p~---~~------~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~ 151 (290)
.++.. .+.+ .++.++.||++++|||++|..|+ .. ...+............+++++|+|+|.+++|+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~ 162 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEA 162 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHH
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHH
Confidence 88765 3433 35668999999999999976554 11 11122223333445578999999999999999
Q ss_pred HHHHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEc
Q 022896 152 AGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 230 (290)
Q Consensus 152 a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 230 (290)
|..+.. .+.+|+++++.+.+++. +++++.+.+.+.+++.||+++.++.|++++.+++++.+.+.+| ++++|.|++|
T Consensus 163 A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 163 IDFLVK--MKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHHH--TTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEEC
T ss_pred HHHHHh--CCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEEC
Confidence 999986 58999999999988875 8899999999999999999999999999987666677777777 8999999999
Q ss_pred cCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 231 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 231 ~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+|.+|+.++++.. +.++++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 240 ~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 285 (452)
T 3oc4_A 240 LNLHPQLAYLDKK---IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMN 285 (452)
T ss_dssp SCCBCCCSSCCTT---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred cCCCCChHHHHhh---hccCCCCCEEECcCccC-CCCCEEEEEeeEEecc
Confidence 9999999887653 46688999999999998 7999999999998764
No 10
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-38 Score=271.94 Aligned_cols=266 Identities=21% Similarity=0.196 Sum_probs=200.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh------------------h----cC---Cccccc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA------------------M----VE---PSFGKR 65 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~------------------~----~~---~~~~~~ 65 (290)
.++||+|||||++|+++|++|++ |++|+|||+ ..+|+.|..... . +. ..+...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 36899999999999999999986 999999999 455654422100 0 00 000000
Q ss_pred c--------cccc----cccc--ccceEEeeeeeeeecceEEe-cCceEEeccEEEEccCCCCC-CCCchHH-HHHHHHH
Q 022896 66 S--------VINH----TDYL--VNGRIVASPAINITENEVLT-AEGRRVVYDYLVIATGHKDP-VPKTRTE-RLNQYQA 128 (290)
Q Consensus 66 ~--------~~~~----~~~~--~~~~~~~~~v~~~~~~~v~~-~~~~~~~~~~vi~a~G~~~~-~p~~~~~-~~~~~~~ 128 (290)
. ...+ ..++ .+++++.+.+..+++..+.+ .++..+.||++++|||+.|. .|...+. .......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 162 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNE 162 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHH
Confidence 0 0000 0111 14577888888888777777 57788999999999999877 6652221 1112222
Q ss_pred HHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccC
Q 022896 129 ENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 208 (290)
Q Consensus 129 ~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~ 208 (290)
.......+++++|+|+|.+++|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.|++++.++.|++++.+
T Consensus 163 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 240 (463)
T 4dna_A 163 AFDLPALPESILIAGGGYIAVEFANIFHG--LGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSAD 240 (463)
T ss_dssp HTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEC
T ss_pred HhhhhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEc
Confidence 22223457999999999999999999986 5889999999999888899999999999999999999999999999877
Q ss_pred CCc-eeEE-cCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccccc
Q 022896 209 EGS-DTYL-TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 282 (290)
Q Consensus 209 ~~~-~~v~-~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~ 282 (290)
+++ +.+. +.+|+ +++|.|++|+|.+|+..++.....+++++++|++.||+++|+ +.|+|||+|||++.+...
T Consensus 241 ~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~ 314 (463)
T 4dna_A 241 ADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRVQLT 314 (463)
T ss_dssp TTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSCCCH
T ss_pred CCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCCCCh
Confidence 555 6788 88887 999999999999999887433333446788999999999997 899999999999865443
No 11
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=7.4e-38 Score=270.23 Aligned_cols=261 Identities=22% Similarity=0.281 Sum_probs=197.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcCC---cccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVEP---SFGKRS 66 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~~---~~~~~~ 66 (290)
++||+|||||++|+++|.+|++ |++|+|||++ .+|+.|..... .+.. ......
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 6899999999999999999976 9999999998 45555432100 0000 000000
Q ss_pred cc--------c----ccccc--ccceEEeeeeeeeecceEEecCceEEeccEEEEccCCCCCCCCchH-HHHHHHHHHHH
Q 022896 67 VI--------N----HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT-ERLNQYQAENQ 131 (290)
Q Consensus 67 ~~--------~----~~~~~--~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~-~~~~~~~~~~~ 131 (290)
+. . +...+ .+++++.+.+..++...+.+ ++.++.||++|+|||+.|..|+..+ ....+......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~ 161 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFA 161 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHhh
Confidence 00 0 00111 24677777777788777777 6778999999999999876654221 11112222223
Q ss_pred HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc
Q 022896 132 KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS 211 (290)
Q Consensus 132 ~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~ 211 (290)
....+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++.+...+.+.+++.|++++.++.|++++.++++
T Consensus 162 ~~~~~~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~ 239 (463)
T 2r9z_A 162 LQQQPKRVAIIGAGYIGIELAGLLRS--FGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQG 239 (463)
T ss_dssp CSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE
T ss_pred hhccCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe
Confidence 23357899999999999999999987 4899999999998888889999999999999999999999999988876556
Q ss_pred eeEEcCCCc-EEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 212 DTYLTSTGD-TINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 212 ~~v~~~~g~-~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
..+.+.+|+ ++++|.|++|+|.+|+.+++ +..++ +++++|+|.||+++|+ +.|+|||+|||++.+.
T Consensus 240 ~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~--~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 308 (463)
T 2r9z_A 240 TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGI--EVQSNGMVPTDAYQNT-NVPGVYALGDITGRDQ 308 (463)
T ss_dssp EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTC--CCCTTSCCCCCTTSBC-SSTTEEECGGGGTSCC
T ss_pred EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCC--ccCCCCCEeECCCCcc-CCCCEEEEeecCCCcc
Confidence 778888998 89999999999999998754 44444 5678899999999997 7999999999987643
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2e-36 Score=261.02 Aligned_cols=260 Identities=21% Similarity=0.333 Sum_probs=196.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCcc----ccccccccccccc--cceE-Eeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF----GKRSVINHTDYLV--NGRI-VASP 83 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~-~~~~ 83 (290)
+||+|||||++|+++|.+|++ |++|+|||+++..++....+........ .........+++. ++++ ....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 589999999999999999964 8999999999876544332221111111 1111111122221 3455 4456
Q ss_pred eeeeecc--eEEecC-----ceEEeccEEEEccCCCCCCCC---ch------HHHHHHHHHHHHHHhcCCeEEEEcCchh
Q 022896 84 AINITEN--EVLTAE-----GRRVVYDYLVIATGHKDPVPK---TR------TERLNQYQAENQKIKSARSILIVGGGPT 147 (290)
Q Consensus 84 v~~~~~~--~v~~~~-----~~~~~~~~vi~a~G~~~~~p~---~~------~~~~~~~~~~~~~~~~~~~v~iiG~g~~ 147 (290)
+..++.. .+.+.+ +..+.||++++|||++|..|+ .. ...+.+..........+++++|+|+|.+
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 7777743 455533 567999999999999865543 21 1122344445555567899999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCcee-EEcCCCcEEecc
Q 022896 148 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINAD 225 (290)
Q Consensus 148 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d 225 (290)
|+|+|..+.. .+.+|+++++.+.+++ .+++++.+.+.+.+++.||+++.++.|++++.+++.+. +.+ +|+++++|
T Consensus 161 g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 161 GAELAEAYSN--QNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSD 237 (452)
T ss_dssp HHHHHHHHHT--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEES
T ss_pred HHHHHHHHHh--cCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECC
Confidence 9999999986 5889999999998887 68889999999999999999999999998876445443 444 77889999
Q ss_pred EEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 226 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 226 ~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
.||+|+|.+|+.++++.. + +++++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 238 ~vv~a~G~~p~~~ll~~~-l--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~ 288 (452)
T 2cdu_A 238 IAILCIGFRPNTELLKGK-V--AMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHY 288 (452)
T ss_dssp EEEECCCEEECCGGGTTT-S--CBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEE
T ss_pred EEEECcCCCCCHHHHHHh-h--hcCCCCCEEECCCcCc-CCCCEEEcceEEEecc
Confidence 999999999999887665 4 5678899999999998 7999999999998754
No 13
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.2e-37 Score=259.64 Aligned_cols=249 Identities=23% Similarity=0.350 Sum_probs=195.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcc-ccccccccccccc--cceEE-eeeeee
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSF-GKRSVINHTDYLV--NGRIV-ASPAIN 86 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~-~~~v~~ 86 (290)
++.+|+|||||+||++||.+|.. +.+|+|||+++.+++....+...+.... ..+......+++. ++++. ...|+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 36899999999999999999964 8999999999987764333333322221 1222233333332 45565 457889
Q ss_pred eecc--eEEecCceEEeccEEEEccCCCCCCCC---ch----HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhh
Q 022896 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDPVPK---TR----TERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAV 157 (290)
Q Consensus 87 ~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~----~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~ 157 (290)
++++ .+.++++.++.||+||+|||++|..|+ .. .....+.......+..+++++|||+|.+|+|+|..+..
T Consensus 88 id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~ 167 (385)
T 3klj_A 88 IDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIID 167 (385)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHh
Confidence 8875 688889999999999999999866544 21 12344444444555568999999999999999999997
Q ss_pred hCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 158 DFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 158 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
. +.+|+++++.+.+++. +++.+.+.+.+.+++.||+++.++.++++ |+++++|.||+|+|.+|+
T Consensus 168 ~--g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 168 S--GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp H--TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEEC
T ss_pred C--CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccC
Confidence 4 8899999999988776 78899999999999999999999998655 567999999999999999
Q ss_pred chhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 237 SDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 237 ~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
.++++..++.. + +| +.||+++++ +.|+|||+|||+..+.
T Consensus 233 ~~~~~~~gl~~--~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~ 271 (385)
T 3klj_A 233 LDFIKDTEIAS--K-RG-ILVNDHMET-SIKDIYACGDVAEFYG 271 (385)
T ss_dssp CGGGTTSCCCB--S-SS-EEECTTCBC-SSTTEEECGGGEEETT
T ss_pred hhhhhhcCCCc--C-CC-EEECCCccc-CCCCEEEEEeeEecCC
Confidence 99998877643 2 44 999999998 7999999999998654
No 14
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.4e-38 Score=273.33 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=202.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh-----------------------cCCccc---
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM-----------------------VEPSFG--- 63 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~-----------------------~~~~~~--- 63 (290)
..++||+|||||++|+++|++|++ |++|+|||+++.+|+.|...... ......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 346999999999999999999976 99999999998667654321100 000000
Q ss_pred --cccccc----cc---ccc-------ccceEE-eeeeeeeecceEEecCceEEeccEEEEccCCCCCCCC---chHHHH
Q 022896 64 --KRSVIN----HT---DYL-------VNGRIV-ASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK---TRTERL 123 (290)
Q Consensus 64 --~~~~~~----~~---~~~-------~~~~~~-~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~~~~~ 123 (290)
...... .. .++ .+++++ .+.+..+++..+.+. +..+.||++|+|||+.|..|+ .....+
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~~~v 199 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNAKGV 199 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCCCSTTTTSBTE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcccCcE
Confidence 000000 11 222 245666 788888888777765 678999999999999877664 211111
Q ss_pred HHHHHHH-HHHhcC-CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCce
Q 022896 124 NQYQAEN-QKIKSA-RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 124 ~~~~~~~-~~~~~~-~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
.+..... ...... ++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.|++++.++.
T Consensus 200 ~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 200 FDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp EEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred eeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCE
Confidence 2222233 211234 999999999999999999986 488999999999988888999999999999999999999999
Q ss_pred EeecccCCCc----eeEEcCCCc-EEeccEEEEccCCCCCch-hhcccccccccCCCCcEEecCCccccCCCCeEEeccc
Q 022896 202 VNLDSVSEGS----DTYLTSTGD-TINADCHFLCTGKPVGSD-WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 275 (290)
Q Consensus 202 v~~i~~~~~~----~~v~~~~g~-~~~~d~vv~a~G~~~~~~-~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~ 275 (290)
|++++.++++ +.+.+.+|+ ++++|.||+|+|.+|+.+ +++..++ +++++|+|.||+++|+ +.|+|||+|||
T Consensus 278 V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~ 354 (523)
T 1mo9_A 278 VTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL--DLGPKGEVLVNEYLQT-SVPNVYAVGDL 354 (523)
T ss_dssp EEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGG
T ss_pred EEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC--ccCCCCCEEECCCCcc-CCCCEEEEeec
Confidence 9999875555 667788887 899999999999999988 7887666 5578899999999998 79999999999
Q ss_pred cCcccc
Q 022896 276 TDIRVS 281 (290)
Q Consensus 276 ~~~~~~ 281 (290)
++.+..
T Consensus 355 ~~~~~~ 360 (523)
T 1mo9_A 355 IGGPME 360 (523)
T ss_dssp GCSSCS
T ss_pred CCCccc
Confidence 987543
No 15
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-38 Score=274.87 Aligned_cols=268 Identities=21% Similarity=0.272 Sum_probs=197.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc-----------------CCccc---------c
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV-----------------EPSFG---------K 64 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~-----------------~~~~~---------~ 64 (290)
+++||+|||||++|+++|++|++ |++|+|||+++.+|+.|....... -..+. .
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 46999999999999999999986 999999999888887654221100 00000 0
Q ss_pred ccccc------------ccccc--ccceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCC-CCCch----HH
Q 022896 65 RSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDP-VPKTR----TE 121 (290)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~-~p~~~----~~ 121 (290)
..... ...++ .+++++.+.+..+++.. +...++ .++.||++|+|||+.|. +|+.. ..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~~~ 183 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEK 183 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccCCe
Confidence 00000 00011 14567777777777764 444455 57999999999999853 44421 12
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCce
Q 022896 122 RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 122 ~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
.+.+..........+++++|||+|.+|+|+|..+... +.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.
T Consensus 184 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~ 261 (491)
T 3urh_A 184 TIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARL--GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAK 261 (491)
T ss_dssp SEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred eEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHc--CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCe
Confidence 2223333333334679999999999999999999874 88999999999999889999999999999999999999999
Q ss_pred EeecccCCCceeEEcCC---C--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEecccc
Q 022896 202 VNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 276 (290)
Q Consensus 202 v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~ 276 (290)
+++++.+++...+.+.+ | +++++|.|++|+|..|+.+++.....+++++++|++.||+++|+ +.|+|||+|||+
T Consensus 262 v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 340 (491)
T 3urh_A 262 VTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVV 340 (491)
T ss_dssp EEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGS
T ss_pred EEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecC
Confidence 99998777666565432 4 57999999999999999887433333446788999999999998 799999999999
Q ss_pred Cccccc
Q 022896 277 DIRVSA 282 (290)
Q Consensus 277 ~~~~~~ 282 (290)
+.+...
T Consensus 341 ~~~~~~ 346 (491)
T 3urh_A 341 RGPMLA 346 (491)
T ss_dssp SSCCCH
T ss_pred CCccch
Confidence 776443
No 16
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.8e-36 Score=256.46 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=194.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCCcccchhhhh-hhcCCccccccccccccccc--cceEEee-ee
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLR-AMVEPSFGKRSVINHTDYLV--NGRIVAS-PA 84 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~v 84 (290)
+++||+|||||++|+++|.+|++ |. +|+|||+++.+++....+. .............. ++. +++++.+ .|
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~v 82 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD---CKRAPEVEWLLGVTA 82 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCC---CTTSCSCEEEETCCE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHH---HHHHCCCEEEcCCEE
Confidence 46899999999999999999976 76 5999999987554321111 11111111111111 221 4566655 48
Q ss_pred eeeecc--eEEecCceEEeccEEEEccCCCCCCCCc-hH--------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHH
Q 022896 85 INITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKT-RT--------ERLNQYQAENQKIKSARSILIVGGGPTGVELAG 153 (290)
Q Consensus 85 ~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~~-~~--------~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~ 153 (290)
+.+++. .+.+.++..+.||++|+|||++|..|+. .+ ....+...+...+..+++++|+|+|.+|+|+|.
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~ 162 (408)
T 2gqw_A 83 QSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAA 162 (408)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHH
Confidence 888864 6777788899999999999998765432 11 122333333333345899999999999999999
Q ss_pred HHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccC
Q 022896 154 EIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG 232 (290)
Q Consensus 154 ~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G 232 (290)
.+.. .+.+|+++++.+.+++. +++++...+.+.+++.||+++.++.|++++ + + .+.+.+|+++++|.||+|+|
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 163 TART--AGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp HHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSC
T ss_pred HHHh--CCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcC
Confidence 9987 48899999999988774 788999999999999999999999998887 3 3 67778888999999999999
Q ss_pred CCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 233 KPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
.+|+.++++..++.. + +| +.||+++|+ +.|+|||+|||+..+.+
T Consensus 237 ~~p~~~l~~~~gl~~--~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~ 280 (408)
T 2gqw_A 237 VLANDALARAAGLAC--D-DG-IFVDAYGRT-TCPDVYALGDVTRQRNP 280 (408)
T ss_dssp EEECCHHHHHHTCCB--S-SS-EECCTTCBC-SSTTEEECGGGEEEEET
T ss_pred CCccHHHHHhCCCCC--C-CC-EEECCCCcc-CCCCEEEEEEEEEecCc
Confidence 999999988877643 3 45 999999998 79999999999998753
No 17
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-37 Score=266.45 Aligned_cols=262 Identities=18% Similarity=0.203 Sum_probs=195.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhh--------------hhcC--Ccc---------c---
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR--------------AMVE--PSF---------G--- 63 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~--------------~~~~--~~~---------~--- 63 (290)
++||+|||||++|+++|++|++ |++|+|||++. +|+.|.... .... ..+ .
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 5899999999999999999976 99999999984 555543210 0000 000 0
Q ss_pred ---cccccc------------ccccc--ccceEEeeeeeeeecce--EEecCce--EEeccEEEEccCCCCCCC-CchH-
Q 022896 64 ---KRSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEGR--RVVYDYLVIATGHKDPVP-KTRT- 120 (290)
Q Consensus 64 ---~~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~~--~~~~~~vi~a~G~~~~~p-~~~~- 120 (290)
...+.. +...+ .+++++.+.+..+++.. +.+.++. ++.||++|+|||++|..| +..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g~ 169 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGF 169 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTTG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCc
Confidence 000000 00111 24577777777777664 4445665 799999999999987666 3211
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCc
Q 022896 121 ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
...............+++++|||+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++
T Consensus 170 ~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~ 247 (479)
T 2hqm_A 170 ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLS 247 (479)
T ss_dssp GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCC
Confidence 1111122222333467999999999999999999987 48999999999998888999999999999999999999999
Q ss_pred eEeecccCCCc--eeEEcCCC-cEEeccEEEEccCCCCCchh-hcccccccccCCCCcEEecCCccccCCCCeEEecccc
Q 022896 201 RVNLDSVSEGS--DTYLTSTG-DTINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 276 (290)
Q Consensus 201 ~v~~i~~~~~~--~~v~~~~g-~~~~~d~vv~a~G~~~~~~~-l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~ 276 (290)
.|++++.++++ ..+.+.+| +++++|.|++|+|.+|+..+ ++..++ +++++|++.||+++++ +.|+|||+|||+
T Consensus 248 ~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 324 (479)
T 2hqm_A 248 KIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGI--KLNSHDQIIADEYQNT-NVPNIYSLGDVV 324 (479)
T ss_dssp CEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTC--CBCTTSCBCCCTTCBC-SSTTEEECGGGT
T ss_pred EEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCc--eECCCCCEeECCCCcc-CCCCEEEEEecC
Confidence 99999875544 67788888 78999999999999998865 566555 5678899999999997 799999999998
Q ss_pred Cccc
Q 022896 277 DIRV 280 (290)
Q Consensus 277 ~~~~ 280 (290)
+.+.
T Consensus 325 ~~~~ 328 (479)
T 2hqm_A 325 GKVE 328 (479)
T ss_dssp TSSC
T ss_pred CCcc
Confidence 7643
No 18
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.7e-37 Score=269.62 Aligned_cols=264 Identities=19% Similarity=0.203 Sum_probs=197.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc--CCcEEEEc--------CCCCcccchhhhhh----------------------hcCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF--SADVTLID--------PKEYFEITWASLRA----------------------MVEP 60 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie--------~~~~~~~~~~~~~~----------------------~~~~ 60 (290)
++||+|||||++|+++|++|++ |++|+||| +...+|+.|..... .+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999965 99999999 24556655432100 0000
Q ss_pred -----cccccccc------------cccccc--c-cceEEeeeeeeeecceEEec-----Cc---eEEeccEEEEccCCC
Q 022896 61 -----SFGKRSVI------------NHTDYL--V-NGRIVASPAINITENEVLTA-----EG---RRVVYDYLVIATGHK 112 (290)
Q Consensus 61 -----~~~~~~~~------------~~~~~~--~-~~~~~~~~v~~~~~~~v~~~-----~~---~~~~~~~vi~a~G~~ 112 (290)
.+....+. .+...+ . +++++.+.+..++++.+... ++ ..+.||++|+|||++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 00000000 001111 2 56788888888888776663 56 689999999999999
Q ss_pred CCCCCchH-HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCccccccCChhHHHHHHHHHH
Q 022896 113 DPVPKTRT-ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWLI 190 (290)
Q Consensus 113 ~~~p~~~~-~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (290)
|..|+... ..+............+++++|+|+|.+++|+|..+....+ +.+|+++++.+.+++.+++++...+.+.++
T Consensus 163 p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 242 (490)
T 1fec_A 163 PQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 242 (490)
T ss_dssp ECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHH
Confidence 76664221 1122222222222357899999999999999999986322 889999999999888899999999999999
Q ss_pred hCCcEEEeCceEeecccCCC-ceeEEcCCCcEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCC
Q 022896 191 SKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQK 267 (290)
Q Consensus 191 ~~gi~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~ 267 (290)
+.||++++++.|++++.+++ ...+.+.+|+++++|.||+|+|.+|+.++ ++..++ +++++|+|.||+++|+ +.|
T Consensus 243 ~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl--~~~~~G~I~Vd~~~~t-~~~ 319 (490)
T 1fec_A 243 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV--EVAKNGAIKVDAYSKT-NVD 319 (490)
T ss_dssp HTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTC--CBCTTSCBCCCTTCBC-SST
T ss_pred hCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCc--cCCCCCCEEECCCCcc-CCC
Confidence 99999999999999987654 37788888889999999999999999874 455454 6678899999999998 799
Q ss_pred CeEEeccccCcc
Q 022896 268 NIFAIGDITDIR 279 (290)
Q Consensus 268 ~vfa~Gd~~~~~ 279 (290)
+|||+|||++.+
T Consensus 320 ~IyA~GD~~~~~ 331 (490)
T 1fec_A 320 NIYAIGDVTDRV 331 (490)
T ss_dssp TEEECGGGGCSC
T ss_pred CEEEEeccCCCc
Confidence 999999999854
No 19
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.2e-37 Score=270.62 Aligned_cols=267 Identities=24% Similarity=0.253 Sum_probs=200.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcC---Cccccc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVE---PSFGKR 65 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~---~~~~~~ 65 (290)
.++||+|||||++|+++|++|++ |++|+|||+ ..+|+.|..... .+. ..+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 35899999999999999999986 999999999 455554332100 000 000000
Q ss_pred --------ccccc----cccc--ccceEEeeeeeeeecceEEec-CceEEeccEEEEccCCCCC-CCCchHH-HHHHHHH
Q 022896 66 --------SVINH----TDYL--VNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDP-VPKTRTE-RLNQYQA 128 (290)
Q Consensus 66 --------~~~~~----~~~~--~~~~~~~~~v~~~~~~~v~~~-~~~~~~~~~vi~a~G~~~~-~p~~~~~-~~~~~~~ 128 (290)
....+ ..++ .+++++.+.+..+++..+.+. ++..+.||++++|||+.|. .|..... .......
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 183 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNE 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHH
Confidence 00000 0111 145778888888888877776 7788999999999999877 6552211 1111111
Q ss_pred HHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccC
Q 022896 129 ENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 208 (290)
Q Consensus 129 ~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~ 208 (290)
.......+++++|+|+|.+++++|..+.. .+.+|+++.+.+.+++.+++.+...+.+.+++.|++++.++.|++++.+
T Consensus 184 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~ 261 (484)
T 3o0h_A 184 IFDLEKLPKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQST 261 (484)
T ss_dssp GGGCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC
T ss_pred HHhHHhcCCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee
Confidence 12222357899999999999999999986 5889999999999888899999999999999999999999999999888
Q ss_pred CCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccccc
Q 022896 209 EGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 282 (290)
Q Consensus 209 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~ 282 (290)
++++.+.+.+|+++++|.||+|+|.+|+..++.....+++++++|++.||+++|+ +.|+|||+|||++.+...
T Consensus 262 ~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 334 (484)
T 3o0h_A 262 ENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHIQLT 334 (484)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSCCCH
T ss_pred CCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCCcCH
Confidence 7778888889989999999999999999887432333446788999999999997 799999999999865433
No 20
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.3e-37 Score=267.90 Aligned_cols=263 Identities=16% Similarity=0.192 Sum_probs=195.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh-----------------------hcCC----cccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA-----------------------MVEP----SFGK 64 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~-----------------------~~~~----~~~~ 64 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+|+.|..... .+.. ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5899999999999999999976 9999999999877765432110 0000 0000
Q ss_pred ccccc------------cccccc--cceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC---chHHHH
Q 022896 65 RSVIN------------HTDYLV--NGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK---TRTERL 123 (290)
Q Consensus 65 ~~~~~------------~~~~~~--~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~---~~~~~~ 123 (290)
..+.. +..++. +++++.+.+..+++.. +.+.+| ..+.||++|+|||+.|..|+ .....+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 00000 011111 3567777777777664 444566 68999999999999866554 211112
Q ss_pred HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHH-HhCCcEEEeCceE
Q 022896 124 NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWL-ISKKVDVKLGERV 202 (290)
Q Consensus 124 ~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gi~~~~~~~v 202 (290)
.+..........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+ ++.||+++.++.|
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 2222222222357999999999999999999986 589999999999998889999999999999 9999999999999
Q ss_pred eecccCCCceeEEcC--CC--cEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEecccc
Q 022896 203 NLDSVSEGSDTYLTS--TG--DTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 276 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~ 276 (290)
++++.+++.+.+.+. +| +++++|.|++|+|.+|+.++ ++..++ +++++|+|.||+++|+ +.|+|||+|||+
T Consensus 240 ~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 316 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINV--AKNERGFVKIGDHFET-SIPDVYAIGDVV 316 (468)
T ss_dssp EEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGGB
T ss_pred EEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCC--ccCCCCCEeECCCccc-CCCCEEEeeccC
Confidence 999876666666554 66 57999999999999999888 455554 5677899999999998 799999999999
Q ss_pred C-ccc
Q 022896 277 D-IRV 280 (290)
Q Consensus 277 ~-~~~ 280 (290)
+ .+.
T Consensus 317 ~~~~~ 321 (468)
T 2qae_A 317 DKGPM 321 (468)
T ss_dssp SSSCS
T ss_pred CCCCc
Confidence 8 443
No 21
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.6e-36 Score=262.91 Aligned_cols=265 Identities=26% Similarity=0.327 Sum_probs=189.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccc--ccc------cccccccc---ccce
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--KRS------VINHTDYL---VNGR 78 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~---~~~~ 78 (290)
++||+|||||++|+++|++|++ +++|+|||+++.+++....+......... ... .....+++ .++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 4799999999999999999963 89999999999865433222222111111 011 11111111 1334
Q ss_pred E-Eeeeeeeeecc--eEEecC---ce--EEeccEEEEccCCCCCCCC---ch------HHHHHHHHHHHHHH--hcCCeE
Q 022896 79 I-VASPAINITEN--EVLTAE---GR--RVVYDYLVIATGHKDPVPK---TR------TERLNQYQAENQKI--KSARSI 139 (290)
Q Consensus 79 ~-~~~~v~~~~~~--~v~~~~---~~--~~~~~~vi~a~G~~~~~p~---~~------~~~~~~~~~~~~~~--~~~~~v 139 (290)
+ ....|..+++. .+.+.+ +. .+.||++|+|||++|..|+ .. .....+.......+ ..++++
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v 162 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKA 162 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEE
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEE
Confidence 4 35778888765 344433 44 7899999999999865543 21 11222333333222 347899
Q ss_pred EEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC
Q 022896 140 LIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST 218 (290)
Q Consensus 140 ~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~ 218 (290)
+|+|+|.+++|+|..+... .+.+|+++++.+.+++ .+++.+.+.+.+.+++.|++++.++.|++++.+++.+.+.+.+
T Consensus 163 vViGgG~~g~e~A~~l~~~-~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~ 241 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLADM-WGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITD 241 (472)
T ss_dssp EEECCSHHHHHHHHHHHHH-HCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEES
T ss_pred EEECCCHHHHHHHHHHHHh-cCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeC
Confidence 9999999999999999862 2789999999998888 7889999999999999999999999999998767777788888
Q ss_pred CcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 219 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 219 g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
|+++++|.||+|+|.+|+.+++...++ +++++|++.||+++|+ +.|+|||+|||+..+..
T Consensus 242 g~~i~aD~Vv~a~G~~p~~~l~~~~gl--~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 301 (472)
T 3iwa_A 242 KRTLDADLVILAAGVSPNTQLARDAGL--ELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNL 301 (472)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHHTC--CBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBT
T ss_pred CCEEEcCEEEECCCCCcCHHHHHhCCc--cCCCCCCEEECCCccc-CCCCEEEeccceecccc
Confidence 889999999999999999888876655 5678899999999998 79999999999965543
No 22
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-36 Score=252.80 Aligned_cols=251 Identities=25% Similarity=0.377 Sum_probs=188.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccc-cccccccccccc--cceEEee-eeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINHTDYLV--NGRIVAS-PAINI 87 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~-~v~~~ 87 (290)
..|++|||||++|+++|.+|++ | +|+|||+++...+....+...+..... ........+++. +++++.+ .|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 3799999999999999999986 8 999999998754332222222211111 111122222222 3566655 58888
Q ss_pred ecc--eEEecCceEEeccEEEEccCCCCCCCCchH-------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhh
Q 022896 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT-------ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVD 158 (290)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~ 158 (290)
++. .+. .++.++.||++|+|||++|..|+..+ ..+.+.....+.+..+++++|+|+|.+|+|+|..+..
T Consensus 87 d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~- 164 (367)
T 1xhc_A 87 DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAE- 164 (367)
T ss_dssp ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHH-
T ss_pred ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHh-
Confidence 876 455 67788999999999999876554211 1223333333334456999999999999999999987
Q ss_pred CCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 159 FPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 159 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.+.+|+++++.+.+++ +++++.+.+.+.+++.||+++.++.|++++. + .+.+.+|+ +++|.|++|+|.+|+.+
T Consensus 165 -~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~--~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 165 -AGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE--E--GVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp -TTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S--EEEETTEE-EECSCEEEECCEEECCH
T ss_pred -CCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e--EEEECCCE-EEcCEEEECcCCCcCHH
Confidence 4889999999998888 8889999999999999999999999988872 2 36667887 99999999999999988
Q ss_pred hhcccccccccCCCCcEEecCCccccCCCCeEEeccccCc
Q 022896 239 WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 278 (290)
Q Consensus 239 ~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~ 278 (290)
+++..++. .+ +| +.||+++|+ +.|+|||+|||+..
T Consensus 238 ll~~~gl~--~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~ 272 (367)
T 1xhc_A 238 LARRSGIH--TG-RG-ILIDDNFRT-SAKDVYAIGDCAEY 272 (367)
T ss_dssp HHHHTTCC--BS-SS-EECCTTSBC-SSTTEEECGGGEEB
T ss_pred HHHhCCCC--CC-CC-EEECCCccc-CCCCEEEeEeeeec
Confidence 88877764 33 44 999999998 79999999999865
No 23
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=3e-36 Score=259.67 Aligned_cols=262 Identities=23% Similarity=0.342 Sum_probs=192.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCc-ccccccccccccc---ccceEEee-ee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPS-FGKRSVINHTDYL---VNGRIVAS-PA 84 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~-~v 84 (290)
++||+|||||++|+++|++|++ +++|+|||+++.+++....+....... ..........+++ .++++..+ .+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 4899999999999999999974 789999999997664433332222111 1111111111111 24566654 78
Q ss_pred eeeecc--eEEecCc-eEEeccEEEEccCCCCCCCC---ch------HHHHHHHHHHHHHHh--cCCeEEEEcCchhHHH
Q 022896 85 INITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPK---TR------TERLNQYQAENQKIK--SARSILIVGGGPTGVE 150 (290)
Q Consensus 85 ~~~~~~--~v~~~~~-~~~~~~~vi~a~G~~~~~p~---~~------~~~~~~~~~~~~~~~--~~~~v~iiG~g~~~~~ 150 (290)
..++.. .+.+.++ .++.||++|+|||+.|..|+ .. ............... .+++++|+|+|.+|+|
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E 162 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIE 162 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHH
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHH
Confidence 888765 4566666 48999999999999866554 21 112233344444444 6789999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEE
Q 022896 151 LAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFL 229 (290)
Q Consensus 151 ~a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~ 229 (290)
+|..+.. .+.+|+++++.+.+++. +++++...+.+.+++. ++++.++.+++++.++ .+.....+++++++|.|++
T Consensus 163 ~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 163 MAEAFAA--QGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp HHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEE
T ss_pred HHHHHHh--CCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEE
Confidence 9999987 48999999999998887 8999999999999999 9999999998887655 3333345677899999999
Q ss_pred ccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 230 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 230 a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
|+|.+|+.++++..++ +++++|++.||+++|+ +.|+|||+|||+..++.
T Consensus 239 a~G~~p~~~l~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 287 (449)
T 3kd9_A 239 ATGIKPNIELAKQLGV--RIGETGAIWTNEKMQT-SVENVYAAGDVAETRHV 287 (449)
T ss_dssp CSCEEECCHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBT
T ss_pred eeCCccCHHHHHhCCc--cCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccc
Confidence 9999999998877665 5678899999999998 79999999999976543
No 24
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=5.4e-36 Score=260.49 Aligned_cols=261 Identities=20% Similarity=0.285 Sum_probs=194.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C---CcEEEEcCCCCcccchhhhhhhcCCc--cccccccccccccc--cceEE-eee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S---ADVTLIDPKEYFEITWASLRAMVEPS--FGKRSVINHTDYLV--NGRIV-ASP 83 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g---~~v~vie~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~-~~~ 83 (290)
++||+|||||++|+++|.+|++ | .+|+|||+++..++.+.......... ..........+++. ++++. ...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 5899999999999999999975 6 99999999987665443322111111 11111111122221 34553 456
Q ss_pred eeeeecc--eEEec-C--ceEEeccEEEEccCCCCCCCC---ch-----------HH------HHHHHHHHHHHH--hcC
Q 022896 84 AINITEN--EVLTA-E--GRRVVYDYLVIATGHKDPVPK---TR-----------TE------RLNQYQAENQKI--KSA 136 (290)
Q Consensus 84 v~~~~~~--~v~~~-~--~~~~~~~~vi~a~G~~~~~p~---~~-----------~~------~~~~~~~~~~~~--~~~ 136 (290)
+..++.. .+.+. + +.++.||++|+|||++|..|+ .. .. .+.+.....+.. ..+
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 194 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDI 194 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 7777743 45554 3 457999999999999866553 22 11 122344444444 568
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL 215 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~ 215 (290)
++++|||+|.+|+|+|..+.. .+.+|+++++.+.+++ .+++++.+.+.+.+++.||+++.++.|++++.++....+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 999999999999999999987 4889999999998887 6888999999999999999999999999887633222344
Q ss_pred cCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 216 TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 216 ~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+ +|+++++|.|++|+|.+|+.++++.. + +++++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l--~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~ 332 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNTTLGNGK-I--DLFRNGAFLVNKRQET-SIPGVYAIGDCATIYD 332 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECCGGGTTC-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred E-CCcEEECCEEEECCCCCcChHHHHhh-h--ccCCCCCEEECCCccc-CCCCEEEeeeeEEecc
Confidence 4 67789999999999999999887665 4 5678899999999998 7999999999998654
No 25
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=9.7e-37 Score=265.41 Aligned_cols=267 Identities=20% Similarity=0.163 Sum_probs=203.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC--------Ccccchhhhhh--------------hc---CCccc---
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE--------YFEITWASLRA--------------MV---EPSFG--- 63 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~--------~~~~~~~~~~~--------------~~---~~~~~--- 63 (290)
.||++||||||+|++||.++++ |.+|+|||+.. .+|+.+..... .. ...+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999987 99999999754 24543211100 00 00000
Q ss_pred ccccccc------------------cccc--ccceEEeeeeeeeecceEEe------cCceEEeccEEEEccCCCCCCCC
Q 022896 64 KRSVINH------------------TDYL--VNGRIVASPAINITENEVLT------AEGRRVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 64 ~~~~~~~------------------~~~~--~~~~~~~~~v~~~~~~~v~~------~~~~~~~~~~vi~a~G~~~~~p~ 117 (290)
......+ ...+ .+++++.+....+++.++.. .+..+++++++|+|||++|.+|+
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~ 201 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 201 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCS
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCC
Confidence 0000000 0011 14578889988988886543 24467999999999999998885
Q ss_pred ---chHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCc
Q 022896 118 ---TRTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 194 (290)
Q Consensus 118 ---~~~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 194 (290)
.....+......+.....+++++|||+|+.|+|+|..+.. .+.+|+++.+. .+++.+++++...+.+.+++.|+
T Consensus 202 ~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~~-~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 202 DVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNS--LGYDVTVAVRS-IVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp SSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHh--cCCeEEEeccc-ccccccchhHHHHHHHHHHhhcc
Confidence 2223333344444444578999999999999999999986 59999999874 67788999999999999999999
Q ss_pred EEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcE-EecCCccccCCCCeEEec
Q 022896 195 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGML-MVDENLRVKGQKNIFAIG 273 (290)
Q Consensus 195 ~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~-~v~~~~~~~~~~~vfa~G 273 (290)
+++.++.++.++..++.+.+.+.+++++.+|.|++|+|.+||.+.|....+++.++.++.+ .+|+++|| +.|+|||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEec
Confidence 9999999999998888888888888899999999999999999998887777777777665 67778887 899999999
Q ss_pred cccCc-ccccc
Q 022896 274 DITDI-RVSAS 283 (290)
Q Consensus 274 d~~~~-~~~~~ 283 (290)
||++. |..++
T Consensus 358 Dv~~~~p~La~ 368 (542)
T 4b1b_A 358 DVAENVPELAP 368 (542)
T ss_dssp TSBTTCCCCHH
T ss_pred cccCCchhHHH
Confidence 99965 44443
No 26
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.4e-36 Score=262.96 Aligned_cols=263 Identities=21% Similarity=0.255 Sum_probs=194.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh-----------------------hcCCccc---cc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA-----------------------MVEPSFG---KR 65 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~-----------------------~~~~~~~---~~ 65 (290)
++||+|||||++|+++|++|++ |++|+|||++ .+|+.|..... .+..... ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 6899999999999999999976 9999999998 45655432110 0100000 00
Q ss_pred ccc-------------ccccccc---cceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC---chHHH
Q 022896 66 SVI-------------NHTDYLV---NGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK---TRTER 122 (290)
Q Consensus 66 ~~~-------------~~~~~~~---~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~---~~~~~ 122 (290)
.+. .+.+++. +++++.+.+..+++.. +.+.++ ..+.||++|+|||++|..|+ .....
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~ 162 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESP 162 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTSC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcCc
Confidence 000 0112222 5677778888888764 445566 68999999999999866554 21111
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 123 LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
+.+..........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++ +++.+...+.+.+++.|++++.++.|
T Consensus 163 ~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v 239 (467)
T 1zk7_A 163 YWTSTEALASDTIPERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQA 239 (467)
T ss_dssp CBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCE
T ss_pred eecHHHHhcccccCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 11222233333457999999999999999999987 4889999999998888 88899999999999999999999999
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
++++.+++...+.+. +.++++|.||+|+|.+|+.+++.....+++++++|++.||+++++ +.|+|||+|||+..+..
T Consensus 240 ~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~ 316 (467)
T 1zk7_A 240 SQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQF 316 (467)
T ss_dssp EEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCCC
T ss_pred EEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCccc
Confidence 988876555566665 458999999999999999876432223345677899999999998 79999999999987653
No 27
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.3e-37 Score=268.61 Aligned_cols=268 Identities=18% Similarity=0.222 Sum_probs=197.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC------Ccccchhhhhhh---------------cC--Cccc----
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE------YFEITWASLRAM---------------VE--PSFG---- 63 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~------~~~~~~~~~~~~---------------~~--~~~~---- 63 (290)
.++||+|||||++|+++|++|++ |++|+|||+++ .+|+.|...... .. ..+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 36999999999999999999986 99999999987 244333211000 00 0000
Q ss_pred -----ccccccc------------cccc--ccceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC---
Q 022896 64 -----KRSVINH------------TDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK--- 117 (290)
Q Consensus 64 -----~~~~~~~------------~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~--- 117 (290)
....... ..++ .+++++.+.+..+++.. +...++ ..+.||++|+|||+.|..|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 0000000 0011 14567777777777664 444555 57999999999999876443
Q ss_pred chHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEE
Q 022896 118 TRTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 197 (290)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 197 (290)
.....+.+..........+++++|+|+|.+++|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 1111122222222223457999999999999999999986 48999999999999988999999999999999999999
Q ss_pred eCceEeecccCCCceeEEcCCC---cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEecc
Q 022896 198 LGERVNLDSVSEGSDTYLTSTG---DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 274 (290)
Q Consensus 198 ~~~~v~~i~~~~~~~~v~~~~g---~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd 274 (290)
.++.+++++.+++...+.+.++ +++++|.|++|+|..|+.+++.....+++++++|++.||+++|+ +.|+|||+||
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD 318 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGD 318 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGG
T ss_pred ECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEc
Confidence 9999999988777766666544 57999999999999999876433334457788999999999997 7999999999
Q ss_pred ccCccccc
Q 022896 275 ITDIRVSA 282 (290)
Q Consensus 275 ~~~~~~~~ 282 (290)
|++.+...
T Consensus 319 ~~~~~~~~ 326 (476)
T 3lad_A 319 VVRGAMLA 326 (476)
T ss_dssp GSSSCCCH
T ss_pred cCCCcccH
Confidence 99766543
No 28
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.2e-37 Score=267.40 Aligned_cols=262 Identities=18% Similarity=0.206 Sum_probs=195.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcC--Cccccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVE--PSFGKRSV 67 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~--~~~~~~~~ 67 (290)
++||+|||||++|+++|.+|++ |++|+|||+++ +|+.|..... .+. .......+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 5899999999999999999976 99999999988 5554321100 000 00000000
Q ss_pred cc------------ccccc--ccceEEeeeeeeeecceEEecCceEEeccEEEEccCCCCCCCC-chHH-HHHHHHHHHH
Q 022896 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TRTE-RLNQYQAENQ 131 (290)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~-~~~~-~~~~~~~~~~ 131 (290)
.. ...++ .+++++.+.+..+++..+.+. +.++.||++|+|||++|..|+ .... .+.+......
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~ 163 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALK 163 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHh
Confidence 00 01112 246777777777777777765 678999999999999977654 2111 1112222222
Q ss_pred HHh-cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCC
Q 022896 132 KIK-SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 210 (290)
Q Consensus 132 ~~~-~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~ 210 (290)
... .+++++|||+|..|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.+++++.+++
T Consensus 164 l~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~ 241 (464)
T 2eq6_A 164 VEEGLPKRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD 241 (464)
T ss_dssp GGGCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred hhhhcCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC
Confidence 223 57999999999999999999986 489999999999888888899999999999999999999999999887666
Q ss_pred ceeEEcC-C--Cc--EEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 211 SDTYLTS-T--GD--TINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 211 ~~~v~~~-~--g~--~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
.+.+.+. + |+ ++++|.|++|+|.+|+.+++ +..++ .++++|++.||+++|+ +.|+|||+|||++.+..
T Consensus 242 ~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~l 316 (464)
T 2eq6_A 242 GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGV--KVDERGFIRVNARMET-SVPGVYAIGDAARPPLL 316 (464)
T ss_dssp EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTC--CBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSCC
T ss_pred EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCc--eecCCCCEEECCCccc-CCCCEEEEeccCCCccc
Confidence 6666654 5 76 89999999999999998874 44444 5678899999999997 79999999999986543
No 29
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.4e-36 Score=264.50 Aligned_cols=263 Identities=19% Similarity=0.308 Sum_probs=198.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccc--cccccccccc-cc--cceE-Eeeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDY-LV--NGRI-VASPA 84 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~--~~~~-~~~~v 84 (290)
+||+|||||++|+++|++|++ +++|+|||+++.+++....+......... ........++ .. ++.+ ....|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 689999999999999999964 79999999999877554433333222211 1112221121 11 3444 36788
Q ss_pred eeeecc--eEEecC---c--eEEeccEEEEccCCCCCCC---Cch------HHHHHHHHHHHHH--HhcCCeEEEEcCch
Q 022896 85 INITEN--EVLTAE---G--RRVVYDYLVIATGHKDPVP---KTR------TERLNQYQAENQK--IKSARSILIVGGGP 146 (290)
Q Consensus 85 ~~~~~~--~v~~~~---~--~~~~~~~vi~a~G~~~~~p---~~~------~~~~~~~~~~~~~--~~~~~~v~iiG~g~ 146 (290)
+.+++. .+.+.+ + .++.||++|+|||++|..| +.. ...+......... ...+++++|+|+|.
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 161 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGF 161 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCH
Confidence 888765 344332 3 3789999999999985544 321 1122222223222 23578999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeeccc-------------------
Q 022896 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV------------------- 207 (290)
Q Consensus 147 ~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~------------------- 207 (290)
+|+|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.||+++.++.+++++.
T Consensus 162 ~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 162 IGLEMMESLHH--LGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHHH--TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHHh--cCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 99999999986 489999999999988888999999999999999999999999998876
Q ss_pred CCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 208 SEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 208 ~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
+++.+.+.+.+|+++++|.||+|+|.+|+.++++..++ +++++|++.||+++|+ +.|+|||+|||+..+..
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 310 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGL--AIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDF 310 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTC--CBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBT
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCc--ccCCCCCEEECCCccc-CCCCEEEeeeeEeeccc
Confidence 34556777788889999999999999999888877665 5678899999999998 79999999999975543
No 30
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.5e-35 Score=250.49 Aligned_cols=258 Identities=21% Similarity=0.282 Sum_probs=193.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCCCcccchhhhhhhcCCcc-cccccc-cccccc--ccceEE-eeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSF-GKRSVI-NHTDYL--VNGRIV-ASPA 84 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~--~~~~~~-~~~v 84 (290)
++||+|||||++|+++|.+|++ | .+|+++|++....+....+........ ..+... ....++ .+++++ ...+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 5899999999999999999976 6 679999998732221111211111111 111111 112221 135565 4567
Q ss_pred eeeecc--eEEecCceEEeccEEEEccCCCCCCCC---ch------HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHH
Q 022896 85 INITEN--EVLTAEGRRVVYDYLVIATGHKDPVPK---TR------TERLNQYQAENQKIKSARSILIVGGGPTGVELAG 153 (290)
Q Consensus 85 ~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~------~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~ 153 (290)
..+++. .+.+.+ ..+.||++++|||++|..|+ .. ...+.++......+..+++++|+|+|.+|+++|.
T Consensus 84 ~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~ 162 (384)
T 2v3a_A 84 TGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFAN 162 (384)
T ss_dssp CEEEGGGTEEEETT-EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHH
Confidence 777763 566654 47999999999999866553 11 1233444444445566899999999999999999
Q ss_pred HHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccC
Q 022896 154 EIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG 232 (290)
Q Consensus 154 ~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G 232 (290)
.+.. .+.+|+++++.+.+++. +++.+.+.+.+.+++.|++++.++.|++++.+++...+.+.+|+++++|.||+|+|
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 163 DLSS--GGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp HHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHHh--CCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcC
Confidence 9987 48999999999887766 47788999999999999999999999999876666778888898999999999999
Q ss_pred CCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCc
Q 022896 233 KPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 278 (290)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~ 278 (290)
.+|+.++++..++. .+ +| +.||+++|+ +.|+|||+|||+..
T Consensus 241 ~~p~~~l~~~~g~~--~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~ 281 (384)
T 2v3a_A 241 LRPRTELAFAAGLA--VN-RG-IVVDRSLRT-SHANIYALGDCAEV 281 (384)
T ss_dssp EEECCHHHHHTTCC--BS-SS-EEECTTCBC-SSTTEEECGGGEEE
T ss_pred CCcCHHHHHHCCCC--CC-CC-EEECCCCCC-CCCCEEEeeeeeeE
Confidence 99998888877764 34 57 999999997 79999999999964
No 31
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=7.5e-37 Score=265.11 Aligned_cols=264 Identities=19% Similarity=0.208 Sum_probs=195.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh------------------------cCC---cccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM------------------------VEP---SFGK 64 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~------------------------~~~---~~~~ 64 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+|+.|...... +.. ....
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 5899999999999999999976 99999999998777665321100 000 0000
Q ss_pred ccccc------------ccccc--ccceEEeeeeeeeecce--EEecC-c-eEEeccEEEEccCCCCCCCC---chHHHH
Q 022896 65 RSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAE-G-RRVVYDYLVIATGHKDPVPK---TRTERL 123 (290)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~-~-~~~~~~~vi~a~G~~~~~p~---~~~~~~ 123 (290)
..+.. +..++ .+++++.+.+..+++.. +.+.+ + .++.||++|+|||++|..|+ .....+
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v 165 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTI 165 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcE
Confidence 00000 01111 14567777777777664 44445 3 57999999999999866554 221112
Q ss_pred HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 124 NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 124 ~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
.+..........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++ .+++++...+.+.+++.||+++.++.|
T Consensus 166 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 243 (474)
T 1zmd_A 166 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKV 243 (474)
T ss_dssp ECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred EcHHHHhhccccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceE
Confidence 2222222222346899999999999999999986 4899999999999888 788999999999999999999999999
Q ss_pred eecccCCCc-eeEE-----cCCCcEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEecc
Q 022896 203 NLDSVSEGS-DTYL-----TSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 274 (290)
Q Consensus 203 ~~i~~~~~~-~~v~-----~~~g~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd 274 (290)
++++.++++ +.+. ..+++++++|.|++|+|.+|+.++ ++..++ +++++|+|.||+++|+ +.|+|||+||
T Consensus 244 ~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~IyA~GD 320 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGI--ELDPRGRIPVNTRFQT-KIPNIYAIGD 320 (474)
T ss_dssp EEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTC--CCCTTSCCCCCTTCBC-SSTTEEECGG
T ss_pred EEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCC--ccCCCCCEEECcCCcc-CCCCEEEeee
Confidence 999876655 6665 356678999999999999999887 455554 5677899999999997 7999999999
Q ss_pred ccCcccc
Q 022896 275 ITDIRVS 281 (290)
Q Consensus 275 ~~~~~~~ 281 (290)
|+..+..
T Consensus 321 ~~~~~~~ 327 (474)
T 1zmd_A 321 VVAGPML 327 (474)
T ss_dssp GSSSCCC
T ss_pred cCCCCcc
Confidence 9987643
No 32
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-36 Score=264.62 Aligned_cols=257 Identities=21% Similarity=0.241 Sum_probs=183.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcCC--ccccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVEP--SFGKRSV 67 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~~--~~~~~~~ 67 (290)
++||+|||||++|+++|.+|++ |++|+|||+++ +|+.|..... .+.. ......+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 5899999999999999999976 99999999985 5554421100 0000 0000000
Q ss_pred --------cc----ccccc--ccceEEeeeeeeeecceEEecC-------------ceEEeccEEEEccCCCCCCCCchH
Q 022896 68 --------IN----HTDYL--VNGRIVASPAINITENEVLTAE-------------GRRVVYDYLVIATGHKDPVPKTRT 120 (290)
Q Consensus 68 --------~~----~~~~~--~~~~~~~~~v~~~~~~~v~~~~-------------~~~~~~~~vi~a~G~~~~~p~~~~ 120 (290)
.. +..++ .+++++.+.+..+++..+...+ +..+.||++|+|||+.|..|+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 00 11111 2457777777667666555533 567999999999999977665221
Q ss_pred -HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeC
Q 022896 121 -ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLG 199 (290)
Q Consensus 121 -~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 199 (290)
............ ..+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.||+++.+
T Consensus 161 ~~~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 161 IENTISSDEFFNI-KESKKIGIVGSGYIAVELINVIKR--LGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTF 237 (500)
T ss_dssp GGGCEEHHHHTTC-CCCSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCcccCHHHHhcc-CCCCeEEEECChHHHHHHHHHHHH--cCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEEC
Confidence 111111222111 127899999999999999999986 5899999999999988899999999999999999999999
Q ss_pred ceEeecccCCCc-eeEEcCCCcE-EeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEeccc
Q 022896 200 ERVNLDSVSEGS-DTYLTSTGDT-INADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 275 (290)
Q Consensus 200 ~~v~~i~~~~~~-~~v~~~~g~~-~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~ 275 (290)
+.|++++.++++ ..+.+.+|++ +++|.|++|+|..|+.+. ++..++ ++ ++|++.||+++|+ +.|+|||+|||
T Consensus 238 ~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~--~~-~~G~i~vd~~~~t-~~~~iya~GD~ 313 (500)
T 1onf_A 238 ADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNV--ET-NNNYIVVDENQRT-SVNNIYAVGDC 313 (500)
T ss_dssp CCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTC--CB-SSSCEEECTTCBC-SSSSEEECSTT
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCc--cc-cCCEEEECCCccc-CCCCEEEEecc
Confidence 999998765433 6778888887 999999999999999864 455555 45 6899999999997 79999999999
Q ss_pred cC
Q 022896 276 TD 277 (290)
Q Consensus 276 ~~ 277 (290)
+.
T Consensus 314 ~~ 315 (500)
T 1onf_A 314 CM 315 (500)
T ss_dssp EE
T ss_pred cc
Confidence 94
No 33
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2.9e-35 Score=251.79 Aligned_cols=262 Identities=21% Similarity=0.334 Sum_probs=196.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCCcccchhhhhh-hcCCc-cccccccccccccc--cceEEe-eee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLRA-MVEPS-FGKRSVINHTDYLV--NGRIVA-SPA 84 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~~~-~~v 84 (290)
.+||+|||||++|+++|.+|++ |. +|+|||+++...+....+.. ..... ..........+++. +++++. ..|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 5899999999999999999976 76 79999998765533221111 11111 11111111122222 345554 467
Q ss_pred eeeecc--eEEecCceEEeccEEEEccCCCCCCCCc---hHHH---------HHHHHHHHHHHhcCCeEEEEcCchhHHH
Q 022896 85 INITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKT---RTER---------LNQYQAENQKIKSARSILIVGGGPTGVE 150 (290)
Q Consensus 85 ~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~~---~~~~---------~~~~~~~~~~~~~~~~v~iiG~g~~~~~ 150 (290)
..+++. .+.+.++..+.||++|+|||++|..|+. .... ..++..+...+..+++++|+|+|.+|+|
T Consensus 84 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E 163 (431)
T 1q1r_A 84 TAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLE 163 (431)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHH
Confidence 888764 6777788889999999999999776652 2111 2222223333446899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccc-CChhHHHHHHHHHHhCCcEEEeCceEeeccc--CCCce-eEEcCCCcEEeccE
Q 022896 151 LAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSV--SEGSD-TYLTSTGDTINADC 226 (290)
Q Consensus 151 ~a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~--~~~~~-~v~~~~g~~~~~d~ 226 (290)
+|..+.. .+.+|+++++.+.+++. +++++...+.+.+++.|++++.++.+++++. +++.+ .+.+.+|+++++|.
T Consensus 164 ~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~ 241 (431)
T 1q1r_A 164 VAATAIK--ANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADL 241 (431)
T ss_dssp HHHHHHH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSE
T ss_pred HHHHHHh--CCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCE
Confidence 9999987 48899999999887764 7888999999999999999999999998876 44443 67788898999999
Q ss_pred EEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 227 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 227 vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
||+|+|.+|+.++++..++.. + +| +.||+++|+ +.|+|||+|||+..+.+
T Consensus 242 Vv~a~G~~p~~~l~~~~gl~~--~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~ 291 (431)
T 1q1r_A 242 VIAGIGLIPNCELASAAGLQV--D-NG-IVINEHMQT-SDPLIMAVGDCARFHSQ 291 (431)
T ss_dssp EEECCCEEECCHHHHHTTCCB--S-SS-EECCTTSBC-SSTTEEECGGGEEEEET
T ss_pred EEECCCCCcCcchhhccCCCC--C-CC-EEECCCccc-CCCCEEEEEeEEEEccc
Confidence 999999999999988877643 3 45 999999998 79999999999998754
No 34
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=4.5e-37 Score=266.82 Aligned_cols=264 Identities=14% Similarity=0.189 Sum_probs=194.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcC---Ccccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVE---PSFGKRS 66 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~---~~~~~~~ 66 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+++.+..... .+. .......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 5899999999999999999976 9999999998777654321100 000 0000000
Q ss_pred ccc------------ccccc--ccceEEeeeeeeeecceEEe--cCc------------eEEeccEEEEccCCCCCCCC-
Q 022896 67 VIN------------HTDYL--VNGRIVASPAINITENEVLT--AEG------------RRVVYDYLVIATGHKDPVPK- 117 (290)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~v~~~~~~~v~~--~~~------------~~~~~~~vi~a~G~~~~~p~- 117 (290)
+.. +..++ .+++++.+.+..++...+.. .++ .++.||++|+|||++|..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~ 165 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCC
Confidence 000 01111 24566666666666654433 344 57999999999999976554
Q ss_pred chH-HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEE
Q 022896 118 TRT-ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 196 (290)
Q Consensus 118 ~~~-~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 196 (290)
... ..+.+..........+++++|+|+|.+|+|+|..+... +.+|+++++.+.+++.+++++.+.+.+.+++.||++
T Consensus 166 i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~--G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i 243 (482)
T 1ojt_A 166 IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNI 243 (482)
T ss_dssp CCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEE
T ss_pred CCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHc--CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEE
Confidence 111 11222222222223479999999999999999999874 889999999999998899999999999999999999
Q ss_pred EeCceEeecccCCCceeEEcCC----CcEEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCCCeE
Q 022896 197 KLGERVNLDSVSEGSDTYLTST----GDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIF 270 (290)
Q Consensus 197 ~~~~~v~~i~~~~~~~~v~~~~----g~~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~~vf 270 (290)
+.++.|++++.+++...+.+.+ |+++++|.|++|+|..|+.+++ +..++ +++++|+|.||+++|+ +.|+||
T Consensus 244 ~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~Iy 320 (482)
T 1ojt_A 244 MVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV--AVTDRGFIEVDKQMRT-NVPHIY 320 (482)
T ss_dssp ECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTC--CCCTTSCCCCCTTSBC-SSTTEE
T ss_pred EECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCc--eeCCCCCEeeCCCccc-CCCCEE
Confidence 9999999988766666666655 6789999999999999999874 55554 5677899999999998 799999
Q ss_pred EeccccCcccc
Q 022896 271 AIGDITDIRVS 281 (290)
Q Consensus 271 a~Gd~~~~~~~ 281 (290)
|+|||++.+..
T Consensus 321 A~GD~~~~~~l 331 (482)
T 1ojt_A 321 AIGDIVGQPML 331 (482)
T ss_dssp ECGGGTCSSCC
T ss_pred EEEcccCCCcc
Confidence 99999986543
No 35
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.7e-37 Score=266.31 Aligned_cols=260 Identities=20% Similarity=0.206 Sum_probs=195.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc--------------------CCccccccc----
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV--------------------EPSFGKRSV---- 67 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~--------------------~~~~~~~~~---- 67 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+|+.|....... ...+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 5899999999999999999976 999999998888887765321110 000000000
Q ss_pred ---------ccccccc--ccceEEeeeeeeeecce--EEecCceE--EeccEEEEccCCCCCCCCchH-HHHHHHHHHH-
Q 022896 68 ---------INHTDYL--VNGRIVASPAINITENE--VLTAEGRR--VVYDYLVIATGHKDPVPKTRT-ERLNQYQAEN- 130 (290)
Q Consensus 68 ---------~~~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~~~--~~~~~vi~a~G~~~~~p~~~~-~~~~~~~~~~- 130 (290)
..+..++ .+++++.+.+..+++.. +...++.. +.||++|+|||+.|..|+..+ ..+.......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~ 163 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFG 163 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHS
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHH
Confidence 1111122 24577888888888773 55667777 999999999999866554211 1222222222
Q ss_pred ---HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccC-ChhHHHHHHHHHHhCCcEEEeCceEeecc
Q 022896 131 ---QKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI-GPKAGDKTRDWLISKKVDVKLGERVNLDS 206 (290)
Q Consensus 131 ---~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~~~~~~~v~~i~ 206 (290)
.....+++++|+|+|.+++|+|..+.. .+.+|+++++.+.+++.+ ++++.+.+.+.++ |+++.++.|++++
T Consensus 164 ~~~~l~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 164 YKTSFRKLPQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp TTCSCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEE
T ss_pred HHHHHhhCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEE
Confidence 122347899999999999999999987 589999999999988877 8888888888776 9999999999888
Q ss_pred cCC-CceeEEcC--CCc--EEeccEEEEccCCCCCchh-hcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 207 VSE-GSDTYLTS--TGD--TINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 207 ~~~-~~~~v~~~--~g~--~~~~d~vv~a~G~~~~~~~-l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
.++ +++.+.+. +|+ ++++|.|++|+|.+|+.++ ++..++ +++++| +.||+++|+ +.|+|||+|||++.+.
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl--~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~~ 314 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGL--SISKTG-IVVDETMKT-NIPNVFATGDANGLAP 314 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTC--CBCSSS-BCCCTTCBC-SSTTEEECGGGTCSCC
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCc--eeCCCC-EeECCCccC-CCCCEEEEEecCCCCc
Confidence 766 66667766 565 7999999999999999884 455554 667889 999999998 8999999999998754
Q ss_pred c
Q 022896 281 S 281 (290)
Q Consensus 281 ~ 281 (290)
.
T Consensus 315 ~ 315 (466)
T 3l8k_A 315 Y 315 (466)
T ss_dssp S
T ss_pred c
Confidence 3
No 36
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.3e-36 Score=262.38 Aligned_cols=266 Identities=20% Similarity=0.217 Sum_probs=193.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcCC---ccccc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVEP---SFGKR 65 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~~---~~~~~ 65 (290)
.++||+|||||++|+++|++|++ |++|+|||++. +|+.|..... .+.. .+...
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 35999999999999999999986 99999999874 4544322100 0000 00000
Q ss_pred ccc--------cc----cccc--ccceEEeeeeeeeecc--eEEecCceEEeccEEEEccCCCCCCC---CchHH-HHHH
Q 022896 66 SVI--------NH----TDYL--VNGRIVASPAINITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTRTE-RLNQ 125 (290)
Q Consensus 66 ~~~--------~~----~~~~--~~~~~~~~~v~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~~~-~~~~ 125 (290)
... .+ ...+ .+++++.+.+..+++. .+. .++.++.||++|+|||+.|..| +..+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~ 176 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGASLGIT 176 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGGGSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeEc
Confidence 000 00 0001 1456777777777765 344 5677899999999999987666 32211 1111
Q ss_pred HHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeec
Q 022896 126 YQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 126 ~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i 205 (290)
..........+++++|||+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.++++
T Consensus 177 ~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i 254 (478)
T 3dk9_A 177 SDGFFQLEELPGRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEV 254 (478)
T ss_dssp HHHHTTCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEE
T ss_pred hHHhhchhhcCccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 22222222357999999999999999999987 4899999999999888899999999999999999999999999998
Q ss_pred ccCCCc--eeEEcCC---C----cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEecccc
Q 022896 206 SVSEGS--DTYLTST---G----DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 276 (290)
Q Consensus 206 ~~~~~~--~~v~~~~---g----~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~ 276 (290)
+.++++ +.+.+.+ | +++++|.|++|+|..|+.+.+....++++++++|++.||+++++ +.|+|||+|||+
T Consensus 255 ~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 333 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVC 333 (478)
T ss_dssp EECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGG
T ss_pred EEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecC
Confidence 876555 5565554 2 57899999999999999875433334446788999999999998 799999999999
Q ss_pred Cccccc
Q 022896 277 DIRVSA 282 (290)
Q Consensus 277 ~~~~~~ 282 (290)
+.+...
T Consensus 334 ~~~~~~ 339 (478)
T 3dk9_A 334 GKALLT 339 (478)
T ss_dssp CSSCCH
T ss_pred CCCccH
Confidence 766543
No 37
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.6e-37 Score=249.81 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=184.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCc-c-ccccccccccc---cccceEEeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPS-F-GKRSVINHTDY---LVNGRIVASPAIN 86 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~---~~~~~~~~~~v~~ 86 (290)
++||+|||||++|+++|.+|++ |++|+|||++...+..+.......... . ..+....+.+. ..++.++.+.|+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 81 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTD 81 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEE
Confidence 5899999999999999999976 999999999875443322111111111 0 01111112222 2245677888888
Q ss_pred eecc----eEEecCceEEeccEEEEccCCCCCCC---CchH---HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHh
Q 022896 87 ITEN----EVLTAEGRRVVYDYLVIATGHKDPVP---KTRT---ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIA 156 (290)
Q Consensus 87 ~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~ 156 (290)
++.. .+.+.++.++.||++|+|+|..|..| +... ...+...........+++++|+|+|.+++++|..|.
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 8765 57777888899999999999986544 3211 111111112223346899999999999999999999
Q ss_pred hhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 157 VDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 157 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.. + +|+++.+.+. .+...+.+.+++.||+++. +.++++..++ .+.+.+|+++++|.+++|+|+.|+
T Consensus 162 ~~--g-~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 162 DW--G-ETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp GT--S-EEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECC
T ss_pred hc--C-cEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccC
Confidence 74 5 9999988765 3345567788999999995 8888776543 677888999999999999999999
Q ss_pred chhhcccccccccCCCC-cEEecCCccccCCCCeEEeccccCcccc
Q 022896 237 SDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 237 ~~~l~~~~~~~~~~~~g-~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
.++++..++.....++| ++.+|+++++ ++|+|||+|||++.+..
T Consensus 228 ~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~~~~ 272 (297)
T 3fbs_A 228 VDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARPAGS 272 (297)
T ss_dssp CSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCTTCC
T ss_pred chhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCchHH
Confidence 89988877754333567 8999999997 79999999999996443
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.1e-37 Score=264.50 Aligned_cols=265 Identities=19% Similarity=0.228 Sum_probs=195.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh-----------------------cC---Ccccc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM-----------------------VE---PSFGK 64 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~-----------------------~~---~~~~~ 64 (290)
.++||+|||||++|+++|.+|++ |++|+|||+++.+|+.|...... +. .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 46999999999999999999986 99999999998777654321100 00 00000
Q ss_pred ccccc------------ccccc--ccceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC---chHHHH
Q 022896 65 RSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK---TRTERL 123 (290)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~---~~~~~~ 123 (290)
..+.. +..++ .+++++.+.+..++++. +.+.+| ..+.||++|+|||++|..|+ .....+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v 164 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKI 164 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccE
Confidence 00000 01111 13566666666666664 334456 68999999999999876554 211112
Q ss_pred HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEe
Q 022896 124 NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 124 ~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
.+..........+++++|+|+|.+|+|+|..+... +.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.|+
T Consensus 165 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~--g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 242 (470)
T 1dxl_A 165 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVV 242 (470)
T ss_dssp ECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEE
T ss_pred EeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEE
Confidence 22222222223579999999999999999999874 8899999999998888899999999999999999999999999
Q ss_pred ecccCCCceeEEcC---CC--cEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEecccc
Q 022896 204 LDSVSEGSDTYLTS---TG--DTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 276 (290)
Q Consensus 204 ~i~~~~~~~~v~~~---~g--~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~ 276 (290)
+++.+++.+.+.+. +| +++++|.|++|+|..|+.++ ++..++ +++++|++.||+++|+ +.|+|||+|||+
T Consensus 243 ~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~Iya~GD~~ 319 (470)
T 1dxl_A 243 GVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGV--ETDKLGRILVNERFST-NVSGVYAIGDVI 319 (470)
T ss_dssp EEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTC--CBCSSSCBCCCTTCBC-SSTTEEECSTTS
T ss_pred EEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCC--ccCCCCCEeECcCCcc-CCCCEEEEeccC
Confidence 99876666655543 44 58999999999999999888 455444 5677899999999997 799999999999
Q ss_pred Ccccc
Q 022896 277 DIRVS 281 (290)
Q Consensus 277 ~~~~~ 281 (290)
+.+..
T Consensus 320 ~~~~~ 324 (470)
T 1dxl_A 320 PGPML 324 (470)
T ss_dssp SSCCC
T ss_pred CCCcc
Confidence 86543
No 39
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=3e-35 Score=255.19 Aligned_cols=262 Identities=18% Similarity=0.274 Sum_probs=193.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCcc--cccccccccccc-c--cceEEe-ee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYL-V--NGRIVA-SP 83 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~--~~~~~~-~~ 83 (290)
++||+|||||++|+++|.+|++ |.+|+|||+++..++....+........ .........+.+ + +++++. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 4799999999999999999975 8999999999876544332222211111 111111111222 1 455554 67
Q ss_pred eeeeecc--eEEec---Cce--EEeccEEEEccCCCCCCCC---chH------HHHHHHHHHHHHHh--cCCeEEEEcCc
Q 022896 84 AINITEN--EVLTA---EGR--RVVYDYLVIATGHKDPVPK---TRT------ERLNQYQAENQKIK--SARSILIVGGG 145 (290)
Q Consensus 84 v~~~~~~--~v~~~---~~~--~~~~~~vi~a~G~~~~~p~---~~~------~~~~~~~~~~~~~~--~~~~v~iiG~g 145 (290)
+..++.. .+.+. ++. ++.||++|+|||++|..|+ ... ....+...+.+.+. .+++++|+|+|
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 7777754 45443 355 7999999999999866554 211 11233333333333 68999999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEecc
Q 022896 146 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINAD 225 (290)
Q Consensus 146 ~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 225 (290)
.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.|++++.++.|++++.+++...+.+. +.++++|
T Consensus 196 ~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D 272 (480)
T 3cgb_A 196 AIGLEMAETFVE--LGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKAD 272 (480)
T ss_dssp HHHHHHHHHHHH--TTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECS
T ss_pred HHHHHHHHHHHh--cCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcC
Confidence 999999999987 4889999999998888888999999999999999999999999988765322334444 4589999
Q ss_pred EEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 226 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 226 ~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
.||+|+|.+|+.++++..++ +++++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 273 ~vi~a~G~~p~~~~l~~~g~--~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~ 324 (480)
T 3cgb_A 273 LVLVSVGVKPNTDFLEGTNI--RTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYH 324 (480)
T ss_dssp EEEECSCEEESCGGGTTSCC--CBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEB
T ss_pred EEEECcCCCcChHHHHhCCc--ccCCCCCEEECCCccC-CCCCEEEeeeEEEecC
Confidence 99999999999888887665 5578899999999998 7999999999997654
No 40
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4e-37 Score=265.53 Aligned_cols=265 Identities=20% Similarity=0.264 Sum_probs=196.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh---------------------cC---Cccccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM---------------------VE---PSFGKRSV 67 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~---------------------~~---~~~~~~~~ 67 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+|+.|...... +. .......+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 3799999999999999999976 99999999998777654321100 00 00000000
Q ss_pred cc------------ccccc--ccceEEeeeeeeeecceEEec-CceEEeccEEEEccCCCCCCCC---chHHHHHHHHHH
Q 022896 68 IN------------HTDYL--VNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDPVPK---TRTERLNQYQAE 129 (290)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~v~~~~~~~v~~~-~~~~~~~~~vi~a~G~~~~~p~---~~~~~~~~~~~~ 129 (290)
.. +..++ .+++++.+.+..+++..+... ++.++.||++|+|||++|..|+ .....+.+....
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~ 160 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEA 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHh
Confidence 00 01111 135677777766766654443 5678999999999999876554 111112122222
Q ss_pred HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCC
Q 022896 130 NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 209 (290)
Q Consensus 130 ~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~ 209 (290)
......+++++|+|+|.+|+++|..+.. .+.+|+++++.+.+++.+++.+.+.+.+.+++.|++++.++.|++++.++
T Consensus 161 ~~~~~~~~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 161 LSFPEVPKRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hccccCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 2222346899999999999999999986 48899999999988888888999999999999999999999999998766
Q ss_pred CceeEEcCCCcEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEeccccCccccc
Q 022896 210 GSDTYLTSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 282 (290)
Q Consensus 210 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~ 282 (290)
+.+.+.+.+|+++++|.||+|+|.+|+.++ ++..++ .++++|++.||+++++ +.|+|||+|||+..+...
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~--~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~~~~ 310 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGL--STDERGRIPVDEHLRT-RVPHIYAIGDVVRGPMLA 310 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTC--CCCTTSCCCCCTTSBC-SSTTEEECGGGSSSCCCH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCC--ccCCCCcEeECCCccc-CCCCEEEEecCCCCccCH
Confidence 667777778889999999999999999877 445444 5567899999999997 799999999999876433
No 41
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.3e-37 Score=263.91 Aligned_cols=262 Identities=21% Similarity=0.261 Sum_probs=192.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh----------------------hcC---Ccccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA----------------------MVE---PSFGKRS 66 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~----------------------~~~---~~~~~~~ 66 (290)
++||+|||||++|+++|.+|++ |++|+|||++ .+++.|..... .+. .......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 4899999999999999999976 9999999998 55544321100 000 0000000
Q ss_pred ccc------------ccccc--ccceEEeeeeeeeecce--EEecCc-eEEeccEEEEccCCCCCCCC---chHHHHHHH
Q 022896 67 VIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG-RRVVYDYLVIATGHKDPVPK---TRTERLNQY 126 (290)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~-~~~~~~~vi~a~G~~~~~p~---~~~~~~~~~ 126 (290)
+.. +.+++ .+++++.+.+..++++. +.+.++ .++.||++|+|||++|..|+ .... +.+.
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~-v~~~ 160 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNR-ILDS 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSS-EECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccce-EecH
Confidence 000 01111 14567777766677664 444556 67999999999999876554 2111 2222
Q ss_pred HHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecc
Q 022896 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 206 (290)
Q Consensus 127 ~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~ 206 (290)
.........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.|++++
T Consensus 161 ~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 238 (455)
T 1ebd_A 161 TGALNLGEVPKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAE 238 (455)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred HHHhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 2222222357999999999999999999987 48999999999988888889999999999999999999999999888
Q ss_pred cCCCceeEEcC---CCcEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 207 VSEGSDTYLTS---TGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 207 ~~~~~~~v~~~---~g~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
.+++.+.+.+. +++++++|.|++|+|.+|+.++ ++..++ +++++|++.||+++|+ +.|+|||+|||++.+..
T Consensus 239 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~--~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 315 (455)
T 1ebd_A 239 EREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGI--KMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGPAL 315 (455)
T ss_dssp EETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTC--CBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCCC
T ss_pred EeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCC--ccCCCCCEeeCCCccc-CCCCEEEEeccCCCccc
Confidence 76655555543 4568999999999999999887 445444 5678899999999997 79999999999986543
No 42
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=8.3e-35 Score=250.51 Aligned_cols=260 Identities=21% Similarity=0.307 Sum_probs=191.8
Q ss_pred CcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCcc--ccccccccccccc--cceE-Eeeeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYLV--NGRI-VASPAI 85 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~-~~~~v~ 85 (290)
+||+|||||++|+++|.+|++ |++|+|||+++.+++............. ..+......+++. ++++ ....+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 589999999999999999964 8999999999876644332222111111 1111111122221 3455 456777
Q ss_pred eeecc--eEEecC---ce--EEeccEEEEccCCCCCCCC---chH------HHHHHHHHHHHHHh--cCCeEEEEcCchh
Q 022896 86 NITEN--EVLTAE---GR--RVVYDYLVIATGHKDPVPK---TRT------ERLNQYQAENQKIK--SARSILIVGGGPT 147 (290)
Q Consensus 86 ~~~~~--~v~~~~---~~--~~~~~~vi~a~G~~~~~p~---~~~------~~~~~~~~~~~~~~--~~~~v~iiG~g~~ 147 (290)
.++.. .+.+.+ +. ++.||++|+|||++|..|+ ... ..+.+...+.+.+. .+++++|+|+|..
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 77654 455533 43 4899999999999865543 211 12233333334444 6899999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccE
Q 022896 148 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADC 226 (290)
Q Consensus 148 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~ 226 (290)
|+++|..+.. .+.+|+++++.+.+++ .+++++.+.+.+.+++.|++++.++.|++++.++....+.+ +++++++|.
T Consensus 161 g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 161 GIEAAEAFAK--AGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADL 237 (447)
T ss_dssp HHHHHHHHHH--TTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSE
T ss_pred HHHHHHHHHH--CCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCE
Confidence 9999999986 4889999999988877 57889999999999999999999999998876532234555 556899999
Q ss_pred EEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 227 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 227 vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
|++|+|.+|+.++++.. + +++++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 238 vi~a~G~~p~~~~~~~~-~--~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~ 287 (447)
T 1nhp_A 238 VVVAVGVRPNTAWLKGT-L--ELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKY 287 (447)
T ss_dssp EEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEE
T ss_pred EEECcCCCCChHHHHhh-h--hhcCCCcEEECccccC-CCCCEEEeeeEEEeec
Confidence 99999999998888765 4 5678899999999998 7999999999998654
No 43
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.8e-35 Score=260.75 Aligned_cols=264 Identities=21% Similarity=0.332 Sum_probs=199.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccc--cccc-cccccccc--cceE-Ee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSV-INHTDYLV--NGRI-VA 81 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~--~~~~-~~ 81 (290)
.+++||+|||||++||++|++|++ +++|+|||+++.+++....+......... ...+ .....+.. ++.+ ..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~ 113 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVL 113 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEEC
Confidence 456899999999999999999964 79999999999877554433332222211 1111 11122211 3344 45
Q ss_pred eeeeeeecc--eEEec---Cce--EEeccEEEEccCCCCCCC---Cc-h------HHHHHHHHHHHHHH--hcCCeEEEE
Q 022896 82 SPAINITEN--EVLTA---EGR--RVVYDYLVIATGHKDPVP---KT-R------TERLNQYQAENQKI--KSARSILIV 142 (290)
Q Consensus 82 ~~v~~~~~~--~v~~~---~~~--~~~~~~vi~a~G~~~~~p---~~-~------~~~~~~~~~~~~~~--~~~~~v~ii 142 (290)
..|+.++.. .+.+. ++. .+.||++|+|||++|..| +. . ...+.........+ ..+++++|+
T Consensus 114 ~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvVi 193 (588)
T 3ics_A 114 SEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVI 193 (588)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 778888765 34432 344 789999999999986544 32 1 12223333332222 468999999
Q ss_pred cCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEE
Q 022896 143 GGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTI 222 (290)
Q Consensus 143 G~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~ 222 (290)
|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.||+++.++.|++++.+++ .+.+.+|+++
T Consensus 194 GgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i 269 (588)
T 3ics_A 194 GGGFIGVEMVENLRE--RGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVI 269 (588)
T ss_dssp CCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEE
T ss_pred CCCHHHHHHHHHHHh--CCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEE
Confidence 999999999999987 589999999999988889999999999999999999999999988876544 4666788899
Q ss_pred eccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 223 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 223 ~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
++|.||+|+|.+|+.++++..++ +++++|++.||+++|+ +.|+|||+|||+..++.
T Consensus 270 ~~D~Vi~a~G~~p~~~~l~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 325 (588)
T 3ics_A 270 QTDMLILAIGVQPESSLAKGAGL--ALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDF 325 (588)
T ss_dssp ECSEEEECSCEEECCHHHHHTTC--CBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBT
T ss_pred EcCEEEEccCCCCChHHHHhcCc--eEcCCCCEEECCcccc-CCCCEEEeeeeeecccc
Confidence 99999999999999988887666 5678899999999998 79999999999975543
No 44
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.9e-35 Score=255.63 Aligned_cols=267 Identities=19% Similarity=0.237 Sum_probs=197.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhh-hcCC-c--------------------c-cc
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRA-MVEP-S--------------------F-GK 64 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~-~~~~-~--------------------~-~~ 64 (290)
..++|++|||||++|++||..|++ +.+|+|||+++.+++....+.. .... . + ..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 346899999999999999999853 8999999999876543221111 0000 0 0 00
Q ss_pred ccccccccc----cccceEEee-eeeeeecc--eEEecCceEEeccEEEEccCCCCCCCCchH-------H------HHH
Q 022896 65 RSVINHTDY----LVNGRIVAS-PAINITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT-------E------RLN 124 (290)
Q Consensus 65 ~~~~~~~~~----~~~~~~~~~-~v~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~-------~------~~~ 124 (290)
..+.....+ ..+++++.+ .|..+++. .+.+.++..+.||+||+|||++|..|+... . ...
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 001100111 124566654 78888754 688888889999999999999987654211 0 122
Q ss_pred HHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhC--CCCeEEEEecCccccc-cCChhHHHHHHHHHHhCCcEEEeCce
Q 022896 125 QYQAENQKIKSARSILIVGGGPTGVELAGEIAVDF--PEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 125 ~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~--~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
++..+......+++++|||+|.+|+|+|..+..+. .+.+|+++.+.+.++. .+++.+...+.+.+++.||+++.++.
T Consensus 169 d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 169 DFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp HHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCC
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 33334444567899999999999999999987531 3678999988765543 36678888999999999999999999
Q ss_pred EeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCC-CCcEEecCCccccCCCCeEEeccccCccc
Q 022896 202 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDT-HGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~-~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
|++++.+++.+.+.+.+|+++++|.||+|+|..|+.++++..++. +++ +|++.||+++|+ .|+|||+|||+..++
T Consensus 249 V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~--~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~ 324 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLE--IDSDFGGFRVNAELQA--RSNIWVAGDAACFYD 324 (493)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCC--BCTTTCSEECCTTCEE--ETTEEECGGGEEEEE
T ss_pred EEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCc--cccCCCcEEECCCccc--CCCeeEeeeeEeccC
Confidence 998876656667888899999999999999999999998877764 454 588999999997 599999999998764
Q ss_pred c
Q 022896 281 S 281 (290)
Q Consensus 281 ~ 281 (290)
.
T Consensus 325 ~ 325 (493)
T 1m6i_A 325 I 325 (493)
T ss_dssp T
T ss_pred c
Confidence 3
No 45
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.3e-37 Score=266.25 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=196.8
Q ss_pred CCcEEEEcCChHHHHHHHHhc-c---CCcEEEEcCCCCcccchhhhhh----------------------hcC--C---c
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRA----------------------MVE--P---S 61 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~---g~~v~vie~~~~~~~~~~~~~~----------------------~~~--~---~ 61 (290)
++||+|||||++|+++|++|+ . |++|+|||+++ +|+.+..... .+. . .
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 589999999999999999995 4 89999999998 6554321100 000 0 0
Q ss_pred ccccccc------------cccccc--ccceEEeeeeeeeec------ce--EEecCce--EEeccEEEEccCCCCCCCC
Q 022896 62 FGKRSVI------------NHTDYL--VNGRIVASPAINITE------NE--VLTAEGR--RVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 62 ~~~~~~~------------~~~~~~--~~~~~~~~~v~~~~~------~~--v~~~~~~--~~~~~~vi~a~G~~~~~p~ 117 (290)
....... .+.+++ .+++++.+.+..+++ .. +...++. .+.||++++|||+.|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 0000000 011111 145777777877777 43 4445565 7999999999999877654
Q ss_pred ch---HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCc
Q 022896 118 TR---TERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 194 (290)
Q Consensus 118 ~~---~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 194 (290)
.. ...+.+..........+++++|+|+|.+++|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.|+
T Consensus 161 i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV 238 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVLPYEDADAALVLEESFAERGV 238 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 11 11111111111222357899999999999999999986 58899999999999888999999999999999999
Q ss_pred EEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEe
Q 022896 195 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAI 272 (290)
Q Consensus 195 ~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~ 272 (290)
+++.++.|++++.+++++.+.+.+|+++++|.||+|+|.+|+.++ ++..++ +++++|+|.||+++|+ +.|+|||+
T Consensus 239 ~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~ 315 (499)
T 1xdi_A 239 RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGI--QLGRGNYLTVDRVSRT-LATGIYAA 315 (499)
T ss_dssp EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTC--CCBTTTBCCCCSSSBC-SSTTEEEC
T ss_pred EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCc--eECCCCCEEECCCccc-CCCCEEEE
Confidence 999999999998776667787888889999999999999999888 555554 5677899999999998 79999999
Q ss_pred ccccCcccc
Q 022896 273 GDITDIRVS 281 (290)
Q Consensus 273 Gd~~~~~~~ 281 (290)
|||++.+..
T Consensus 316 GD~~~~~~l 324 (499)
T 1xdi_A 316 GDCTGLLPL 324 (499)
T ss_dssp SGGGTSCSC
T ss_pred eccCCCccc
Confidence 999987643
No 46
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.8e-36 Score=260.89 Aligned_cols=262 Identities=18% Similarity=0.214 Sum_probs=191.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhh---------------h---hcC-Ccc------cccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR---------------A---MVE-PSF------GKRS 66 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~---------------~---~~~-~~~------~~~~ 66 (290)
++||+|||||++|+++|.+|++ |++|+|||++ .+++.|.... . ... ... ....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 3899999999999999999976 9999999998 4443332110 0 000 000 0000
Q ss_pred cc------------cccccc--ccceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC---chHHHHHH
Q 022896 67 VI------------NHTDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK---TRTERLNQ 125 (290)
Q Consensus 67 ~~------------~~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~---~~~~~~~~ 125 (290)
.. .+.+++ .+++++.+.+..++.+. +.+.++ .++.||++|+|+|+.|..|+ .... +.+
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~-~~~ 160 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSAN-VVT 160 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCce-EEe
Confidence 00 001111 24566666655555553 445566 68999999999999865543 2211 222
Q ss_pred HHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeec
Q 022896 126 YQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 126 ~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i 205 (290)
..........+++++|+|+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.++++
T Consensus 161 ~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i 238 (464)
T 2a8x_A 161 YEEQILSRELPKSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESI 238 (464)
T ss_dssp HHHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEE
T ss_pred cHHHhhccccCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEE
Confidence 22222222357999999999999999999987 4889999999999988889999999999999999999999999998
Q ss_pred ccCCCceeEEcC-CC--cEEeccEEEEccCCCCCchh--hcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 206 SVSEGSDTYLTS-TG--DTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 206 ~~~~~~~~v~~~-~g--~~~~~d~vv~a~G~~~~~~~--l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+.+++.+.+.+. +| +++++|.|++|+|..|+.++ ++..++ +++++|+|.||+++|+ +.|+|||+|||++.+.
T Consensus 239 ~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 315 (464)
T 2a8x_A 239 ADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGV--ALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLLQ 315 (464)
T ss_dssp EECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTC--CBCTTSSBCCCTTSBC-SSTTEEECGGGGCSSC
T ss_pred EEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCC--ccCCCCCEeECcCCcc-CCCCEEEeECcCCCcc
Confidence 876666666653 56 57999999999999999887 455554 5677899999999997 7999999999998654
Q ss_pred c
Q 022896 281 S 281 (290)
Q Consensus 281 ~ 281 (290)
.
T Consensus 316 ~ 316 (464)
T 2a8x_A 316 L 316 (464)
T ss_dssp S
T ss_pred C
Confidence 3
No 47
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=6.4e-35 Score=253.71 Aligned_cols=262 Identities=18% Similarity=0.123 Sum_probs=189.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcC--------CCCcccchhhhhh----------------------hcCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDP--------KEYFEITWASLRA----------------------MVEP 60 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~--------~~~~~~~~~~~~~----------------------~~~~ 60 (290)
.++||+|||||++|+++|.+|++ |++|+|||+ ...+|+.|..... .+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 35999999999999999999976 999999997 3456665432210 0000
Q ss_pred ----cccccccccc------------cccc--ccceEEeeeeeeeecce--EEecCc--eEEeccEEEEccCCCCCCCC-
Q 022896 61 ----SFGKRSVINH------------TDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK- 117 (290)
Q Consensus 61 ----~~~~~~~~~~------------~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~~~~~~vi~a~G~~~~~p~- 117 (290)
.........+ ...+ .+++++.+.+..+++.. +...++ .++.||++|+|||++|..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 0000000000 0011 24577888888888775 444455 57999999999999976554
Q ss_pred chHH--HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcE
Q 022896 118 TRTE--RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVD 195 (290)
Q Consensus 118 ~~~~--~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 195 (290)
..+. ..............+++++|||+|.+|+|+|..+.. .+.+|+++++. .+++.+++++.+.+.+.+++.||+
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG--IGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCE
Confidence 3221 111222222223357899999999999999999987 48999999986 467778899999999999999999
Q ss_pred EEeCceEeecccCC-CceeEEcCC---Cc--EEeccEEEEccCCCCCchhhcccccccccC-CCCcEEecCCccccCCCC
Q 022896 196 VKLGERVNLDSVSE-GSDTYLTST---GD--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQKN 268 (290)
Q Consensus 196 ~~~~~~v~~i~~~~-~~~~v~~~~---g~--~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~-~~g~~~v~~~~~~~~~~~ 268 (290)
++.++.+++++..+ +...+.+.+ |+ ++++|.|++|+|..|+.+++.....+++++ ++|++.||+++|+ +.|+
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~ 320 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPH 320 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCC
Confidence 99999998887643 445554433 54 478999999999999998854444445777 7899999999998 7999
Q ss_pred eEEeccccC
Q 022896 269 IFAIGDITD 277 (290)
Q Consensus 269 vfa~Gd~~~ 277 (290)
|||+|||+.
T Consensus 321 IyA~GD~~~ 329 (488)
T 3dgz_A 321 IYAIGDVAE 329 (488)
T ss_dssp EEECGGGBT
T ss_pred EEEeEEecC
Confidence 999999984
No 48
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3.6e-36 Score=261.23 Aligned_cols=264 Identities=17% Similarity=0.225 Sum_probs=191.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh---------------hc--CC--ccc--------c
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA---------------MV--EP--SFG--------K 64 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~---------------~~--~~--~~~--------~ 64 (290)
++||+|||||++|+++|.+|++ |++|+|||+++.+++.|..... .. .. ... .
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5899999999999999999976 9999999998877765432100 00 00 000 0
Q ss_pred ccccc------------ccccc--ccceEEeeeeeeeecce--EEecCc--eE------EeccEEEEccCCCCC-CCCch
Q 022896 65 RSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG--RR------VVYDYLVIATGHKDP-VPKTR 119 (290)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~--v~~~~~--~~------~~~~~vi~a~G~~~~-~p~~~ 119 (290)
..+.. +..++ .+++++.+.....+... +.+.++ .+ +.||++|+|||++|. +|+..
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~~ 164 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIE 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCCC
Confidence 00000 00111 13556665555555443 444455 45 999999999999863 44421
Q ss_pred HH--HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEE
Q 022896 120 TE--RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 197 (290)
Q Consensus 120 ~~--~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 197 (290)
.. .+.+..........+++++|||+|.+|+|+|..+.. .+.+|+++++.+.+++.+++++...+.+.+++.||+++
T Consensus 165 ~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 165 IDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp CCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 11 122222222222347999999999999999999987 48899999999999888899999999999999999999
Q ss_pred eCceEeeccc--CCCceeEEcC-----CCcEEeccEEEEccCCCCCch--hhcccccccccCCCCcEEecCCccccCCCC
Q 022896 198 LGERVNLDSV--SEGSDTYLTS-----TGDTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDENLRVKGQKN 268 (290)
Q Consensus 198 ~~~~v~~i~~--~~~~~~v~~~-----~g~~~~~d~vv~a~G~~~~~~--~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 268 (290)
.++.|++++. +++...+.+. +++++++|.|++|+|.+|+.+ +++..++ +++++|+|.||+++|+ +.|+
T Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~ 319 (478)
T 1v59_A 243 LSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGL--EVDKRGRLVIDDQFNS-KFPH 319 (478)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTC--CBCTTSCBCCCTTSBC-SSTT
T ss_pred eCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCc--eeCCCCCEeECcCCcc-CCCC
Confidence 9999998876 4444555544 346899999999999999987 6666655 5678899999999997 7999
Q ss_pred eEEeccccCcccc
Q 022896 269 IFAIGDITDIRVS 281 (290)
Q Consensus 269 vfa~Gd~~~~~~~ 281 (290)
|||+|||+..+..
T Consensus 320 IyA~GD~~~~~~~ 332 (478)
T 1v59_A 320 IKVVGDVTFGPML 332 (478)
T ss_dssp EEECGGGSSSCCC
T ss_pred EEEeeccCCCccc
Confidence 9999999987543
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.3e-36 Score=257.93 Aligned_cols=259 Identities=17% Similarity=0.203 Sum_probs=190.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh------------------h-----cCCc-----cc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA------------------M-----VEPS-----FG 63 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~------------------~-----~~~~-----~~ 63 (290)
++|++|||||++|+++|.+|++ |++|+|||+ +.+|+.|..... . .... ..
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 5899999999999999999986 999999999 556655432100 0 0000 00
Q ss_pred cccccc------------ccccc--ccceEEeeeeeeeecceEEecCceEEeccEEEEccCCCCCCCC-chHH-HHHHHH
Q 022896 64 KRSVIN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TRTE-RLNQYQ 127 (290)
Q Consensus 64 ~~~~~~------------~~~~~--~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~~~~p~-~~~~-~~~~~~ 127 (290)
...+.. ...++ .+++++.+.+..+++..+.+++ ..+.||++|+|||++|..|+ .... .+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~ 162 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGGPVISST 162 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBTTEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccCcEecHH
Confidence 000000 01111 2456777777677777777765 78999999999999976554 1111 111222
Q ss_pred HHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeeccc
Q 022896 128 AENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 207 (290)
Q Consensus 128 ~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~ 207 (290)
........+++++|||+|.+|+|+|..+... +.+|+++++.+.+++.+++++.+.+.+.+++.||+++.++.+++++.
T Consensus 163 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 163 EALAPKALPQHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN 240 (458)
T ss_dssp HHTCCSSCCSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET
T ss_pred HHhhhhccCCeEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe
Confidence 2222223478999999999999999999874 88999999999998888999999999999999999999999998876
Q ss_pred CCCceeEEcCCC--cEEeccEEEEccCCCCCchhh--cccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 208 SEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 208 ~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~l--~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
++ +.+...+| +++++|.|++|+|.+|+.+++ +..++ .++++ ++.||+++|+ +.|+|||+|||+..+..
T Consensus 241 -~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~--~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 312 (458)
T 1lvl_A 241 -GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDL--KMNGA-AIAIDERCQT-SMHNVWAIGDVAGEPML 312 (458)
T ss_dssp -TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCC--CEETT-EECCCTTCBC-SSTTEEECGGGGCSSCC
T ss_pred -CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCC--cccCC-EEeECCCCcC-CCCCEEEeeccCCCccc
Confidence 33 55664456 589999999999999998764 45444 45566 8999999997 79999999999986543
No 50
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.8e-35 Score=258.51 Aligned_cols=262 Identities=16% Similarity=0.123 Sum_probs=186.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC--------Ccccchhhhhh----------------------hcCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE--------YFEITWASLRA----------------------MVEP 60 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~--------~~~~~~~~~~~----------------------~~~~ 60 (290)
.++||+||||||+|+++|.+|++ |++|+|||+++ .+|+.|..... .+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 36899999999999999999976 99999999964 45654432200 0000
Q ss_pred ----ccccccccccc------------ccc--ccceEEeeeeeeeecceE--EecCce--EEeccEEEEccCCCCCCCCc
Q 022896 61 ----SFGKRSVINHT------------DYL--VNGRIVASPAINITENEV--LTAEGR--RVVYDYLVIATGHKDPVPKT 118 (290)
Q Consensus 61 ----~~~~~~~~~~~------------~~~--~~~~~~~~~v~~~~~~~v--~~~~~~--~~~~~~vi~a~G~~~~~p~~ 118 (290)
.........+. ..+ .+++++.+.+..+++..+ ...++. ++.||++|+|||++|..|+.
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i 190 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGI 190 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCC
Confidence 00000000000 011 245778888888888754 334443 79999999999999776653
Q ss_pred hHH--HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEE
Q 022896 119 RTE--RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 196 (290)
Q Consensus 119 ~~~--~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 196 (290)
.+. ..............+++++|||+|.+|+|+|..+.. .+.+|+++.+. .+++.+++++.+.+.+.+++.||++
T Consensus 191 ~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v 267 (519)
T 3qfa_A 191 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAG--IGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKF 267 (519)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 221 111122222222356889999999999999999997 48899999985 6778889999999999999999999
Q ss_pred EeCceEeecccCC----CceeE--EcCCC-c--EEeccEEEEccCCCCCchhhcccccccccC-CCCcEEecCCccccCC
Q 022896 197 KLGERVNLDSVSE----GSDTY--LTSTG-D--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQ 266 (290)
Q Consensus 197 ~~~~~v~~i~~~~----~~~~v--~~~~g-~--~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~-~~g~~~v~~~~~~~~~ 266 (290)
+.++.+++++..+ +.+.+ ...+| + ++++|.|++|+|..|+.+++.....+++++ ++|++.||+++|+ +.
T Consensus 268 ~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~ 346 (519)
T 3qfa_A 268 IRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NV 346 (519)
T ss_dssp EESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SS
T ss_pred EeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CC
Confidence 9998877775432 23333 33455 2 568999999999999988753333444667 5799999999998 89
Q ss_pred CCeEEeccccC
Q 022896 267 KNIFAIGDITD 277 (290)
Q Consensus 267 ~~vfa~Gd~~~ 277 (290)
|+|||+|||+.
T Consensus 347 ~~IyA~GD~~~ 357 (519)
T 3qfa_A 347 PYIYAIGDILE 357 (519)
T ss_dssp TTEEECGGGBS
T ss_pred CCEEEEEeccC
Confidence 99999999983
No 51
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.5e-35 Score=256.10 Aligned_cols=261 Identities=16% Similarity=0.099 Sum_probs=188.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC---------Ccccchhhhhh----------------------hcC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE---------YFEITWASLRA----------------------MVE 59 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~---------~~~~~~~~~~~----------------------~~~ 59 (290)
.++||+|||||++|+++|++|++ |++|+|||+.+ .+|+.|..... .+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46999999999999999999986 99999999421 25555432110 000
Q ss_pred C----cccccccccc-c-----------ccc--ccceEEeeeeeeeecce--EEecCc-eEEeccEEEEccCCCCCCCCc
Q 022896 60 P----SFGKRSVINH-T-----------DYL--VNGRIVASPAINITENE--VLTAEG-RRVVYDYLVIATGHKDPVPKT 118 (290)
Q Consensus 60 ~----~~~~~~~~~~-~-----------~~~--~~~~~~~~~v~~~~~~~--v~~~~~-~~~~~~~vi~a~G~~~~~p~~ 118 (290)
. ......+..+ . ..+ .+++++.+.+..+++.. +...++ .++.||++|+|||+.|..|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~i 167 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDI 167 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCSS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCCC
Confidence 0 0000000000 0 001 24577788888887774 444455 479999999999998776652
Q ss_pred hHH--HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEE
Q 022896 119 RTE--RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 196 (290)
Q Consensus 119 ~~~--~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 196 (290)
.+. ...+..........+++++|+|+|.+++|+|..+.. .+.+|+++.+. .+++.+++++.+.+.+.+++.||++
T Consensus 168 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~Gv~i 244 (483)
T 3dgh_A 168 PGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRS-IVLRGFDQQMAELVAASMEERGIPF 244 (483)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCC-CCCcccCHHHHHHHHHHHHhCCCEE
Confidence 221 111122222222357899999999999999999987 48999999984 6777888999999999999999999
Q ss_pred EeCceEeecccCCC-ceeEEcCCCc-----EEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeE
Q 022896 197 KLGERVNLDSVSEG-SDTYLTSTGD-----TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIF 270 (290)
Q Consensus 197 ~~~~~v~~i~~~~~-~~~v~~~~g~-----~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vf 270 (290)
+.++.+++++.+++ .+.+.+.+++ ++++|.|++|+|..|+.+++.....++++++ |++.||+++|+ +.|+||
T Consensus 245 ~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~Iy 322 (483)
T 3dgh_A 245 LRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIY 322 (483)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEE
Confidence 99999998887544 3556554443 7899999999999999988743334446677 99999999997 799999
Q ss_pred EeccccC
Q 022896 271 AIGDITD 277 (290)
Q Consensus 271 a~Gd~~~ 277 (290)
|+|||+.
T Consensus 323 A~GD~~~ 329 (483)
T 3dgh_A 323 AVGDIIY 329 (483)
T ss_dssp ECSTTBT
T ss_pred EEEcccC
Confidence 9999984
No 52
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3e-34 Score=245.56 Aligned_cols=267 Identities=23% Similarity=0.220 Sum_probs=188.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc--cceEEeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 87 (290)
.++|+|||||++|+++|.+|++ +++|+|||+++++.+.+.............+...++.++++ +++++.+.|+.+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~I 81 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEE
Confidence 4689999999999999999974 58999999999876654333322222222333444455443 578899999999
Q ss_pred ecc--eEEecCceEEeccEEEEccCCCC--CCCCch--------HHHHHHHHHHHHHHhcCCeEEEEcCch------hHH
Q 022896 88 TEN--EVLTAEGRRVVYDYLVIATGHKD--PVPKTR--------TERLNQYQAENQKIKSARSILIVGGGP------TGV 149 (290)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~vi~a~G~~~--~~p~~~--------~~~~~~~~~~~~~~~~~~~v~iiG~g~------~~~ 149 (290)
+++ +|.+++|.++.||+||+|||+++ .+|+.. .............+...+.++|+|++. .+.
T Consensus 82 d~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~ 161 (430)
T 3hyw_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHH
Confidence 976 68899999999999999999983 345421 122222233333344556666666542 233
Q ss_pred HHHHHH----hhhC--CCCeEEEEecCccccc---cCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC-
Q 022896 150 ELAGEI----AVDF--PEKKVTLVHKGSRLLE---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG- 219 (290)
Q Consensus 150 ~~a~~l----~~~~--~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g- 219 (290)
|++..+ ..+. ...++++++..+.+.. ...+...+.+.+.++++||+++.++.|++++ ++++.+...+|
T Consensus 162 e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~ 239 (430)
T 3hyw_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSC
T ss_pred HHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCC
Confidence 444333 3221 2457888877664432 3445677888899999999999999997765 45566666555
Q ss_pred -cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccccc
Q 022896 220 -DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 282 (290)
Q Consensus 220 -~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~ 282 (290)
+++++|.+++++|.+|+ +++...+..+..+.+|++.+|+++|++++|||||+|||++.|+..
T Consensus 240 ~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~ 302 (430)
T 3hyw_A 240 THEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE 302 (430)
T ss_dssp EEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS
T ss_pred ceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcc
Confidence 47999999999999985 677776665555567889999999977999999999999987643
No 53
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=5.8e-35 Score=241.39 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=183.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc-CCccc----cccccccccccc--cceEEeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV-EPSFG----KRSVINHTDYLV--NGRIVASPA 84 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~--~~~~~~~~v 84 (290)
++||+|||||++|+++|++|++ |++|+|||++ .++.|....... .+.+. .+....+.++.. ++++....|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 92 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIV 92 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 5899999999999999999976 9999999998 555544311100 01111 111111112111 345555788
Q ss_pred eeeecc----eEEecCceEEeccEEEEccCCCCCCCC---chH---HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHH
Q 022896 85 INITEN----EVLTAEGRRVVYDYLVIATGHKDPVPK---TRT---ERLNQYQAENQKIKSARSILIVGGGPTGVELAGE 154 (290)
Q Consensus 85 ~~~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~ 154 (290)
..++.. .+.+.++..+.||++|+|+|..|..|. ... ..++...........+++++|+|+|.+++++|..
T Consensus 93 ~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~ 172 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEI 172 (323)
T ss_dssp EEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHH
T ss_pred EEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHH
Confidence 888765 467777789999999999999865443 211 1221112222344578999999999999999999
Q ss_pred HhhhCCCCeEEEEecCccccccCChhHHHHHHHHHH-hCCcEEEeCceEeecccCCCceeEEcCC---Cc--EEeccEEE
Q 022896 155 IAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSDTYLTST---GD--TINADCHF 228 (290)
Q Consensus 155 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gi~~~~~~~v~~i~~~~~~~~v~~~~---g~--~~~~d~vv 228 (290)
+... +.+|+++.+.+.+.. .+ .+.+.+. +.||+++.++.++++..+++...+.+.+ |+ ++++|.++
T Consensus 173 l~~~--g~~v~~~~~~~~~~~--~~----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv 244 (323)
T 3f8d_A 173 LSSY--STKVYLIHRRDTFKA--QP----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVF 244 (323)
T ss_dssp HHHH--SSEEEEECSSSSCCS--CH----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred HHHh--CCeEEEEEeCCCCCc--CH----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEE
Confidence 9874 889999999887654 22 2333444 4599999999999888765444455443 65 79999999
Q ss_pred EccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 229 LCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 229 ~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+|+|..|+.++++..++ +++++|++.+|+++++ +.|+|||+|||++.+
T Consensus 245 ~a~G~~p~~~~~~~~g~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 292 (323)
T 3f8d_A 245 IEIGFDPPTDFAKSNGI--ETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAW 292 (323)
T ss_dssp ECCCEECCHHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBSTT
T ss_pred EEECCCCChhHHhhcCe--eecCCCcEecCCCcee-cCCCEEEcceecCCC
Confidence 99999999899888766 5678999999999998 799999999999863
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.9e-36 Score=244.93 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=169.2
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcC-Ccccc----cccccccccc-c-cceEE-
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVE-PSFGK----RSVINHTDYL-V-NGRIV- 80 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~-~-~~~~~- 80 (290)
...+|||+||||||||++||.+|++ |++|+|||++.. ++.+.......+ +.+.. +......... + ...+.
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQY 81 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccc
Confidence 3457999999999999999999986 999999999754 332211111000 11100 0000001110 0 11121
Q ss_pred eeeeeeeecc--eEEecCceEEeccEEEEccCCCCCC---CCchH---HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHH
Q 022896 81 ASPAINITEN--EVLTAEGRRVVYDYLVIATGHKDPV---PKTRT---ERLNQYQAENQKIKSARSILIVGGGPTGVELA 152 (290)
Q Consensus 81 ~~~v~~~~~~--~v~~~~~~~~~~~~vi~a~G~~~~~---p~~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a 152 (290)
...+...... .....++.++.||++|+|||++|.. |+... ..+............+++++|||+|++|+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A 161 (312)
T 4gcm_A 82 GDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG 161 (312)
T ss_dssp CCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred eeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHH
Confidence 1122222222 4556677899999999999998554 44211 11111222223345689999999999999999
Q ss_pred HHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCce----eEEcC--CCcEEeccE
Q 022896 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD----TYLTS--TGDTINADC 226 (290)
Q Consensus 153 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~----~v~~~--~g~~~~~d~ 226 (290)
..+.. .+.+|+++++.+.+... .......++..++.......+......+... ..... ++..+++|.
T Consensus 162 ~~l~~--~g~~Vtlv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (312)
T 4gcm_A 162 TFLTK--FADKVTIVHRRDELRAQ-----RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADG 234 (312)
T ss_dssp HHHTT--TCSEEEEECSSSSCCSC-----HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred HHHHh--cCCEEEEEecccccCcc-----hhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeee
Confidence 99985 69999999998876532 1223445677788888777776555444331 11222 334789999
Q ss_pred EEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 227 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 227 vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+++++|..|+..++...++ .+++|+|.||+++|| ++|+|||+|||++.+
T Consensus 235 v~~~~g~~~~~~~~~~~g~---~~~~G~I~vd~~~~T-s~pgIyA~GDv~~~~ 283 (312)
T 4gcm_A 235 VFIYIGMKPLTAPFKDLGI---TNDVGYIVTKDDMTT-SVPGIFAAGDVRDKG 283 (312)
T ss_dssp EEECSCEEESCGGGGGGTC---BCTTSCBCCCTTSBC-SSTTEEECSTTBSCS
T ss_pred EEeecCCCcCchhHHhcce---ecCCCeEeeCCCCcc-CCCCEEEEeecCCCc
Confidence 9999999999988888765 367899999999998 799999999999743
No 55
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2e-35 Score=242.18 Aligned_cols=253 Identities=15% Similarity=0.177 Sum_probs=173.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCC-ccc-ccccc---ccccccccceEEeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEP-SFG-KRSVI---NHTDYLVNGRIVASPAIN 86 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~-~~~-~~~~~---~~~~~~~~~~~~~~~v~~ 86 (290)
+|||+|||||||||+||++|++ |++|+|||++...+............ ... .+... .....+....+....+..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVM 85 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEE
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEE
Confidence 5999999999999999999976 99999999986544221111111100 000 01000 001112234555555555
Q ss_pred eecc-----eEEecCceEEeccEEEEccCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEcCchh-HHHHHHH
Q 022896 87 ITEN-----EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPT-GVELAGE 154 (290)
Q Consensus 87 ~~~~-----~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~iiG~g~~-~~~~a~~ 154 (290)
+... ++.+.++.++.||++|+|||++|..|+.... .+............+++++|||+|.. +.++|..
T Consensus 86 ~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~ 165 (304)
T 4fk1_A 86 ITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKL 165 (304)
T ss_dssp EEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHH
T ss_pred eeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHH
Confidence 5432 5778888999999999999998665542211 11112222233446778888888765 5677777
Q ss_pred HhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCC
Q 022896 155 IAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 155 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
+.. .+.+|+++.+.+.+ ...+.+.++++|++++.+. ++.+..+++. ..+.+.+|+++++|.+++++|.
T Consensus 166 ~~~--~~~~v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~ 234 (304)
T 4fk1_A 166 VYN--WSTDLVIATNGNEL--------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTF 234 (304)
T ss_dssp HTT--TCSCEEEECSSCCC--------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCEE
T ss_pred HHh--CCceEEEEeccccc--------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeecc
Confidence 764 58889988876543 3456677889999998765 5556555444 5678899999999999998887
Q ss_pred CCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 234 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
.|+..++...++ +++++|+|.||+++|| +.|||||+|||++.+
T Consensus 235 ~~~~~~~~~~g~--~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~~ 277 (304)
T 4fk1_A 235 FRPNQFIEQLGC--ELQSNGTFVIDDFGRT-SEKNIYLAGETTTQG 277 (304)
T ss_dssp ECSSCHHHHTTC--CCCTTSSSCSSTTCBC-SSTTEEECSHHHHTS
T ss_pred ccCChhhhhcCe--EECCCCCEEECcCCcc-CCCCEEEEeccCCCc
Confidence 766677877665 6789999999999998 799999999999754
No 56
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=9.6e-35 Score=239.25 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=170.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh---hcC--Ccccc-----ccccccccccc--cceE
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA---MVE--PSFGK-----RSVINHTDYLV--NGRI 79 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~---~~~--~~~~~-----~~~~~~~~~~~--~~~~ 79 (290)
.|||+||||||||++||.+|++ |++|+|||++...+..+...-. .+. +.++. +....+.+... ...+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTI 83 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEE
Confidence 6999999999999999999976 9999999998753322211100 000 01110 01111111111 2234
Q ss_pred Eeeeeeeeecc----eEEecCceEEeccEEEEccCCCCCCC---CchHHH---HHHHH--HHHHHHhcCCeEEEEcCchh
Q 022896 80 VASPAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVP---KTRTER---LNQYQ--AENQKIKSARSILIVGGGPT 147 (290)
Q Consensus 80 ~~~~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~~~~---~~~~~--~~~~~~~~~~~v~iiG~g~~ 147 (290)
....+...... .+.+.++.++.||++|+|||++|..| +..... ..... ........+++++|+|+|++
T Consensus 84 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~i 163 (314)
T 4a5l_A 84 ITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDA 163 (314)
T ss_dssp ECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHH
T ss_pred EEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChH
Confidence 44444444332 46677888999999999999986544 422110 01111 11122346799999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc---eeEE---cCCCcE
Q 022896 148 GVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYL---TSTGDT 221 (290)
Q Consensus 148 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~---~~v~---~~~g~~ 221 (290)
|+|+|..+.. .+.+|+++++.+.... ......+.....+++.+....+.++...+.. ..+. ..++++
T Consensus 164 g~e~A~~l~~--~G~~Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T 4a5l_A 164 AMEEALHLTK--YGSKVIILHRRDAFRA-----SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKV 236 (314)
T ss_dssp HHHHHHHHTT--TSSEEEEECSSSSCCS-----CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHHH--hCCeeeeecccccccc-----cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccccccee
Confidence 9999999986 5899999998765421 1223344456678888888888777654443 2332 234568
Q ss_pred EeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 222 INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 222 ~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+++|.+++++|..|+.+++... +.++++|.+ +|+++|| +.|+|||+|||++.+.
T Consensus 237 i~~d~vi~a~G~~pn~~~l~~~---~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~~ 290 (314)
T 4a5l_A 237 VPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKT-SVDGVFACGDVCDRVY 290 (314)
T ss_dssp EECSEEEECSCEEESCGGGTTS---SCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSSC
T ss_pred eccccceEecccccChhHhccc---ceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCcc
Confidence 9999999999999999998653 356788876 8889998 7999999999998763
No 57
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=6.6e-35 Score=241.39 Aligned_cols=254 Identities=17% Similarity=0.214 Sum_probs=178.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc-CCccc-----cccccccccccc--cceEEeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV-EPSFG-----KRSVINHTDYLV--NGRIVASP 83 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~--~~~~~~~~ 83 (290)
++||+|||||++|+++|.+|++ |++|+|||++ .+++.+....... .+.+. ......+.+... ++++..+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 86 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDE 86 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeee
Confidence 5899999999999999999976 9999999998 4555443221100 01110 011111111111 34566677
Q ss_pred eeeeecc-------eEEecCceEEeccEEEEccCCCCCCCC---chH---HHHHHHHHHHHHHhcCCeEEEEcCchhHHH
Q 022896 84 AINITEN-------EVLTAEGRRVVYDYLVIATGHKDPVPK---TRT---ERLNQYQAENQKIKSARSILIVGGGPTGVE 150 (290)
Q Consensus 84 v~~~~~~-------~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~ 150 (290)
+..++.. .+.+.++..+.||++|+|+|..|..|+ ... ..++.+.........+++++|+|+|.+++|
T Consensus 87 v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 166 (325)
T 2q7v_A 87 VQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVE 166 (325)
T ss_dssp EEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHH
T ss_pred EEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHH
Confidence 7777643 356667788999999999999865543 211 111111122233456799999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHH-hCCcEEEeCceEeecccCCCceeEEcC---CCc--EEec
Q 022896 151 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSDTYLTS---TGD--TINA 224 (290)
Q Consensus 151 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gi~~~~~~~v~~i~~~~~~~~v~~~---~g~--~~~~ 224 (290)
+|..|.. .+.+|+++++.+.+. .. ..+.+.+. +.||+++.++.++++..++....+.+. +|+ ++++
T Consensus 167 ~A~~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~ 238 (325)
T 2q7v_A 167 EGMFLTK--FADEVTVIHRRDTLR--AN----KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELAT 238 (325)
T ss_dssp HHHHHTT--TCSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEEC
T ss_pred HHHHHHh--cCCEEEEEeCCCcCC--cc----hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEc
Confidence 9999986 488999999987653 12 23334444 469999999999988765332244433 565 7899
Q ss_pred cEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 225 DCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 225 d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
|.|++|+|+.|+.+++... + .++++|++.||+++++ +.|+|||+|||++.+
T Consensus 239 D~vi~a~G~~p~~~~l~~~-~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 289 (325)
T 2q7v_A 239 DGVFIFIGHVPNTAFVKDT-V--SLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI 289 (325)
T ss_dssp SEEEECSCEEESCGGGTTT-S--CBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS
T ss_pred CEEEEccCCCCChHHHhhh-c--ccCCCccEecCCCCcc-CCCCEEEeecccCcc
Confidence 9999999999999888765 3 5678899999999997 799999999999863
No 58
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2.5e-34 Score=236.79 Aligned_cols=257 Identities=15% Similarity=0.150 Sum_probs=180.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEE-EcCCCCcccchhhhhhhc-CCccc-----cccccccccccc--cceEEe
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTL-IDPKEYFEITWASLRAMV-EPSFG-----KRSVINHTDYLV--NGRIVA 81 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~v-ie~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~--~~~~~~ 81 (290)
.++||+|||||++||++|++|++ |++|+| +|+ +.+++.|....... .+.+. .+....+.++.. ++.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 36899999999999999999986 999999 999 45565543322110 01111 111111122221 345666
Q ss_pred eeeeee-ec--ceE---EecCceEEeccEEEEccCCCCCCCC---chH---HHHHHHHHHHHHHhcCCeEEEEcCchhHH
Q 022896 82 SPAINI-TE--NEV---LTAEGRRVVYDYLVIATGHKDPVPK---TRT---ERLNQYQAENQKIKSARSILIVGGGPTGV 149 (290)
Q Consensus 82 ~~v~~~-~~--~~v---~~~~~~~~~~~~vi~a~G~~~~~p~---~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~~ 149 (290)
+.+..+ +. ..+ ...++ ++.||++|+|+|..|..|. ... ..++...........+++++|+|+|.+++
T Consensus 82 ~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~ 160 (315)
T 3r9u_A 82 VGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTAL 160 (315)
T ss_dssp CCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHH
T ss_pred EEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHH
Confidence 677777 33 222 22334 8999999999999865543 211 22222222333445789999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc---eeEEcCCCc--EEec
Q 022896 150 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYLTSTGD--TINA 224 (290)
Q Consensus 150 ~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~ 224 (290)
++|..+.. .+.+|+++.+.+.+. .. ...+.+.+++.||++++++.++++..+++. +.+...+|+ ++++
T Consensus 161 e~a~~l~~--~g~~v~~~~~~~~~~--~~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~ 233 (315)
T 3r9u_A 161 EEALYLAN--ICSKIYLIHRRDEFR--AA---PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNV 233 (315)
T ss_dssp HHHHHHHT--TSSEEEEECSSSSCB--SC---HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECC
T ss_pred HHHHHHHh--hCCEEEEEEeCCCCC--CC---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeec
Confidence 99999986 488999999988762 22 233445557889999999999998776543 334444775 7999
Q ss_pred cEEEEccCCCCCchhhcc-cccc-cccCCCCcEEecCCccccCCCCeEEeccccCc
Q 022896 225 DCHFLCTGKPVGSDWLKD-TILK-DSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 278 (290)
Q Consensus 225 d~vv~a~G~~~~~~~l~~-~~~~-~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~ 278 (290)
|.+|+|+|..|+..++.. ..++ ++++++|++.||+++|+ ++|+|||+|||++.
T Consensus 234 D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~ 288 (315)
T 3r9u_A 234 PGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKD 288 (315)
T ss_dssp SCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTT
T ss_pred CeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCC
Confidence 999999999999988876 2232 46788899999999998 89999999999864
No 59
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.1e-34 Score=246.80 Aligned_cols=266 Identities=20% Similarity=0.220 Sum_probs=188.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc-ccceEEeeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL-VNGRIVASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~ 88 (290)
.++|+|||||++|+++|.+|++ +.+|+|||+++.+.+.+.................++..+. .+++++.+.|+.++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 4789999999999999999964 5799999999876543322222111111122222233322 25788999999999
Q ss_pred cc--eEEecCceEEeccEEEEccCCCCC---CCCch-------------HHHHHHHHHHHHHHhcCCeEEEEcCc-----
Q 022896 89 EN--EVLTAEGRRVVYDYLVIATGHKDP---VPKTR-------------TERLNQYQAENQKIKSARSILIVGGG----- 145 (290)
Q Consensus 89 ~~--~v~~~~~~~~~~~~vi~a~G~~~~---~p~~~-------------~~~~~~~~~~~~~~~~~~~v~iiG~g----- 145 (290)
++ .+.+.++.++.||+|++|+|+.+. +|+.. ................+..+++.++.
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~ 161 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRC 161 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBC
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEe
Confidence 86 688889999999999999999854 33311 11222222233333344555554432
Q ss_pred -h----hHHHHHHHHhhhCCCCeEEEEecCcccc--ccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC
Q 022896 146 -P----TGVELAGEIAVDFPEKKVTLVHKGSRLL--EFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST 218 (290)
Q Consensus 146 -~----~~~~~a~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~ 218 (290)
. .+.+++..+.......+|++++..+.+. ..+++.+.+.+.+.+++.|++++.++.++.++.+.+...+.+.+
T Consensus 162 ~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 162 PPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred ehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 1 3455666666656678999999887653 22444555555666788999999999998888888888899999
Q ss_pred CcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCC-ccccCCCCeEEeccccCc-cccc
Q 022896 219 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDI-RVSA 282 (290)
Q Consensus 219 g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~-~~~~~~~~vfa~Gd~~~~-~~~~ 282 (290)
|+++++|.+++++|.+|+ +++...++ .+++|++.||++ +|++++|||||+|||++. +.++
T Consensus 242 g~~i~~D~vi~~~g~~~~-~~~~~~gl---~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk 303 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG-KIAQSASL---TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPK 303 (401)
T ss_dssp SCEEECSEEEECCCEEEC-HHHHHTTC---CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCB
T ss_pred CcEEEeeEEEEecCcCCc-hhHhhccc---cccCCCEEECCCcceecCCCCEEEecccccCCCCCc
Confidence 999999999999999885 78888776 378899999987 788899999999999874 3344
No 60
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.9e-34 Score=236.08 Aligned_cols=256 Identities=18% Similarity=0.197 Sum_probs=178.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCCcccchhhhhhhc-CCccc-----cccccccccccc--cceEEee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEYFEITWASLRAMV-EPSFG-----KRSVINHTDYLV--NGRIVAS 82 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~--~~~~~~~ 82 (290)
++||+|||||++|+++|.+|++ |+ +|+|||++. .++.+....... .+.++ ......+.+.+. ++++...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 3799999999999999999976 99 999999964 444433211100 01110 011111111111 3455556
Q ss_pred eeeeeecc----eEEecCceEEeccEEEEccCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEcCchhHHHHH
Q 022896 83 PAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGVELA 152 (290)
Q Consensus 83 ~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a 152 (290)
.+..++.. .+.+.++..+.||++|+|+|..|..|+.... .++.+.........+++++|+|+|.+++|+|
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A 159 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA 159 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHH
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHH
Confidence 77777643 4656777889999999999998666542211 1111122223345689999999999999999
Q ss_pred HHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHH-hCCcEEEeCceEeecccCCCce-eEEcC---CCc--EEecc
Q 022896 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TINAD 225 (290)
Q Consensus 153 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gi~~~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~~d 225 (290)
..+.. .+.+|+++++.+.+. ..+ .+.+.+. +.||+++.++.++++..+++.+ .+.+. +|+ ++++|
T Consensus 160 ~~l~~--~g~~Vtlv~~~~~~~--~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 231 (311)
T 2q0l_A 160 IYLAN--ICKKVYLIHRRDGFR--CAP----ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVP 231 (311)
T ss_dssp HHHHT--TSSEEEEECSSSSCC--SCH----HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHHh--cCCEEEEEeeCCccC--CCH----HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecC
Confidence 99986 488999999987652 222 3444554 4799999999999887654432 34433 565 78999
Q ss_pred EEEEccCCCCCchhhcccc--cccccCCCCcEEecCCccccCCCCeEEeccccCc
Q 022896 226 CHFLCTGKPVGSDWLKDTI--LKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 278 (290)
Q Consensus 226 ~vv~a~G~~~~~~~l~~~~--~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~ 278 (290)
.|++|+|+.|+.+++...+ .++.++++|++.||+++|+ +.|+|||+|||++.
T Consensus 232 ~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~ 285 (311)
T 2q0l_A 232 GFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIF 285 (311)
T ss_dssp EEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT
T ss_pred EEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCc
Confidence 9999999999999988764 1235678899999999997 79999999999986
No 61
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.2e-34 Score=241.08 Aligned_cols=257 Identities=14% Similarity=0.163 Sum_probs=179.2
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC----CcccchhhhhhhcC-Ccccc-----ccccccccccc--c
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE----YFEITWASLRAMVE-PSFGK-----RSVINHTDYLV--N 76 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~----~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~--~ 76 (290)
..+++||+|||||++||++|++|++ |++|+|||+++ ..++.|........ +.++. +....+.+++. +
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 3456999999999999999999976 99999999954 45555443221100 11111 11111111111 4
Q ss_pred ceEEeeeeeeeecc--e--EEe---cCceEEeccEEEEccCCCCCCCCchHH------HHHHHHHHHHH--HhcCCeEEE
Q 022896 77 GRIVASPAINITEN--E--VLT---AEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQK--IKSARSILI 141 (290)
Q Consensus 77 ~~~~~~~v~~~~~~--~--v~~---~~~~~~~~~~vi~a~G~~~~~p~~~~~------~~~~~~~~~~~--~~~~~~v~i 141 (290)
+.+..+.+..++.. . +.+ .++..+.||++|+|+|..|..|..... .++........ ...+++++|
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 178 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAV 178 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEE
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEE
Confidence 56666667777765 2 333 366789999999999998655542211 11111111222 346899999
Q ss_pred EcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhC-CcEEEeCceEeecccCCCce-eEEcCC-
Q 022896 142 VGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD-TYLTST- 218 (290)
Q Consensus 142 iG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gi~~~~~~~v~~i~~~~~~~-~v~~~~- 218 (290)
+|+|.+++++|..|.. .+.+|+++.+.+.+.. ...+.+.+.+. ||+++.++.+++++.+++.+ .+.+.+
T Consensus 179 vG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~ 250 (338)
T 3itj_A 179 IGGGDSACEEAQFLTK--YGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNT 250 (338)
T ss_dssp ECSSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEET
T ss_pred ECCCHHHHHHHHHHHh--cCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEEC
Confidence 9999999999999986 4889999999887643 34455556555 99999999999998776542 244433
Q ss_pred ----CcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEe-cCCccccCCCCeEEeccccCc
Q 022896 219 ----GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMV-DENLRVKGQKNIFAIGDITDI 278 (290)
Q Consensus 219 ----g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v-~~~~~~~~~~~vfa~Gd~~~~ 278 (290)
++++++|.||+|+|..|+..++.. ++ .++++|++.+ |.++++ +.|+|||+|||++.
T Consensus 251 ~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l--~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~ 311 (338)
T 3itj_A 251 KKNEETDLPVSGLFYAIGHTPATKIVAG-QV--DTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS 311 (338)
T ss_dssp TTTEEEEEECSEEEECSCEEECCGGGBT-TB--CBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS
T ss_pred CCCceEEEEeCEEEEEeCCCCChhHhhC-ce--EecCCCcEEEcCccccc-CCCCEEEeeccCCC
Confidence 357999999999999999888876 44 6678999985 667776 89999999999984
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.8e-34 Score=236.97 Aligned_cols=256 Identities=18% Similarity=0.206 Sum_probs=178.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc-CCcc---c-cccccccccccc--cceEEee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV-EPSF---G-KRSVINHTDYLV--NGRIVAS 82 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~~--~~~~~~~ 82 (290)
..++||+|||||++|+++|++|++ |++|+|||+.. .++.+....... .+.+ . ......+.+... ++++...
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 345899999999999999999976 99999999954 444332211000 0111 0 011111111111 3455556
Q ss_pred eeeeeecc----eEEecCceEEeccEEEEccCCCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHH
Q 022896 83 PAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRT------ERLNQYQAENQKIKSARSILIVGGGPTGVELA 152 (290)
Q Consensus 83 ~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a 152 (290)
.+..++.. .+.+ ++..+.||++|+|+|..|..|+... ..++...........+++++|+|+|.+++|+|
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a 171 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAA 171 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHH
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHH
Confidence 67776642 3444 5568999999999999865554111 11111111223345689999999999999999
Q ss_pred HHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEc---CCCc--EEeccE
Q 022896 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLT---STGD--TINADC 226 (290)
Q Consensus 153 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~---~~g~--~~~~d~ 226 (290)
..+.. .+.+|+++++.+.+. . ...+.+.+++.||+++.++.++++..+++. ..+.+ .+|+ ++++|.
T Consensus 172 ~~l~~--~g~~V~~i~~~~~~~--~----~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 243 (319)
T 3cty_A 172 ISMSE--YVKNVTIIEYMPKYM--C----ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDG 243 (319)
T ss_dssp HHHTT--TBSEEEEECSSSSCC--S----CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSE
T ss_pred HHHHh--hCCcEEEEEcCCccC--C----CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCE
Confidence 99986 488999999887653 1 234556677899999999999988876542 23333 2564 689999
Q ss_pred EEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 227 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 227 vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
||+|+|+.|+.+++...++ +++++|++.||+++++ +.|+|||+|||++.+
T Consensus 244 vi~a~G~~p~~~~l~~~gl--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 293 (319)
T 3cty_A 244 VFIYVGLIPQTSFLKDSGV--KLDERGYIVVDSRQRT-SVPGVYAAGDVTSGN 293 (319)
T ss_dssp EEECCCEEECCGGGTTSCC--CBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC
T ss_pred EEEeeCCccChHHHhhccc--cccCCccEeCCCCCcc-CCCCEEEeecccCcc
Confidence 9999999999999987655 5678899999999997 799999999999864
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=7.6e-34 Score=234.50 Aligned_cols=258 Identities=15% Similarity=0.172 Sum_probs=183.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh-cCCccc-----ccccccccccc--ccceEEeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM-VEPSFG-----KRSVINHTDYL--VNGRIVASP 83 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~--~~~~~~~~~ 83 (290)
++||+|||||++|+++|++|++ |++|+|||+.. .++.+...... ..+.++ ......+..+. .+.++..+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 5899999999999999999986 99999999763 44433221100 001111 01111111111 134666667
Q ss_pred eeeeecc--eEE-ecCceEEeccEEEEccCCCCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHH
Q 022896 84 AINITEN--EVL-TAEGRRVVYDYLVIATGHKDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGPTGVELAGE 154 (290)
Q Consensus 84 v~~~~~~--~v~-~~~~~~~~~~~vi~a~G~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~ 154 (290)
+..++.. .+. +.++..+.||++++|+|..|..|+..... ++...........+++++|+|+|.+++|+|..
T Consensus 84 v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~ 163 (320)
T 1trb_A 84 INKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALY 163 (320)
T ss_dssp EEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHH
T ss_pred eeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHH
Confidence 7777754 222 56777899999999999987766532211 11111222334578999999999999999999
Q ss_pred HhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEEcCC----C--cEEeccEE
Q 022896 155 IAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTST----G--DTINADCH 227 (290)
Q Consensus 155 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~~~~----g--~~~~~d~v 227 (290)
|.. .+.+|+++++.+.+. ..+.+.+.+.+.+++.||+++.++.++++..+++.+ .+.+.+ | +++++|.|
T Consensus 164 l~~--~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~v 239 (320)
T 1trb_A 164 LSN--IASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239 (320)
T ss_dssp HTT--TSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEE
T ss_pred HHh--cCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEE
Confidence 986 488999999887653 355677788888999999999999999988766442 244332 4 57999999
Q ss_pred EEccCCCCCchhhcccccccccCCCCcEEecCCc----cccCCCCeEEeccccCcc
Q 022896 228 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL----RVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 228 v~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~----~~~~~~~vfa~Gd~~~~~ 279 (290)
|+|+|..|+.+++. .++ +++ +|++.+|+++ +.+++|+||++|||++.+
T Consensus 240 v~a~G~~p~~~~~~-~~l--~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~ 291 (320)
T 1trb_A 240 FVAIGHSPNTAIFE-GQL--ELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHI 291 (320)
T ss_dssp EECSCEEESCGGGT-TTS--CEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSS
T ss_pred EEEeCCCCChHHhc-ccc--ccc-CceEEECCCcccccccCCCCCEEEcccccCCc
Confidence 99999999988887 334 456 8999999986 334899999999999875
No 64
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-34 Score=240.47 Aligned_cols=259 Identities=17% Similarity=0.192 Sum_probs=183.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh----cCCccc----cccccccccccc--cceE-
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM----VEPSFG----KRSVINHTDYLV--NGRI- 79 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~--~~~~- 79 (290)
.++||+|||||++|+++|++|++ |++|+|||+++.+++.|...... ..+.+. .+....+.+... +..+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 35899999999999999999975 99999999998887766432110 000000 011111111111 2233
Q ss_pred Eeeeeeeeecc----eEEecCceEEeccEEEEccCCC---CCCC---CchH---HHHHHHHHHHHHHhcCCeEEEEcCch
Q 022896 80 VASPAINITEN----EVLTAEGRRVVYDYLVIATGHK---DPVP---KTRT---ERLNQYQAENQKIKSARSILIVGGGP 146 (290)
Q Consensus 80 ~~~~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~---~~~p---~~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~ 146 (290)
....|..++.. .+.+.++.++.||++|+|+|.. |..| +... ..++.... ......+++++|+|+|.
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G~ 162 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVK-SKAEFQGKRVLIVGGGD 162 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCS-CGGGGTTCEEEEECSSH
T ss_pred eCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecC-chhhcCCCEEEEECCCH
Confidence 35567777653 3666677789999999999994 4433 3110 00100000 00112579999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcC---CC--cE
Q 022896 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS---TG--DT 221 (290)
Q Consensus 147 ~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~---~g--~~ 221 (290)
+++|+|..|.. .+.+|+++.+.+.+.. .+.....+.+.+++.||+++.++.+++++.+++...+.+. +| ++
T Consensus 163 ~g~e~a~~l~~--~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 238 (335)
T 2zbw_A 163 SAVDWALNLLD--TARRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELA 238 (335)
T ss_dssp HHHHHHHHTTT--TSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHHHh--hCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEE
Confidence 99999999986 4889999999887643 2467778888889999999999999988874332344443 66 57
Q ss_pred EeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 222 INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 222 ~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+++|.+++|+|+.|+.++++..++. ++ +|++.||+++|+ +.|+|||+|||+..+
T Consensus 239 i~~D~vi~a~G~~p~~~~l~~~~~~--~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~ 292 (335)
T 2zbw_A 239 LEVDAVLILAGYITKLGPLANWGLA--LE-KNKIKVDTTMAT-SIPGVYACGDIVTYP 292 (335)
T ss_dssp EECSEEEECCCEEEECGGGGGSCCC--EE-TTEEECCTTCBC-SSTTEEECSTTEECT
T ss_pred EecCEEEEeecCCCCchHhhhccee--cc-CCeeeeCCCCCC-CCCCEEEeccccccC
Confidence 9999999999999988888876664 34 689999999997 799999999999764
No 65
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-34 Score=237.57 Aligned_cols=268 Identities=17% Similarity=0.204 Sum_probs=178.1
Q ss_pred Ccchhhhh-ccCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh-cCCccc-----ccccccccc
Q 022896 1 MESRRQQQ-SEGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM-VEPSFG-----KRSVINHTD 72 (290)
Q Consensus 1 m~~~~~~~-~~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~ 72 (290)
|+.++..+ ++..++||+|||||++|+++|++|++ |++|+|||+.. .++.|...... ..+.+. .+....+.+
T Consensus 1 m~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 79 (335)
T 2a87_A 1 MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMRE 79 (335)
T ss_dssp ---------CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHH
T ss_pred CCCCCCCccccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHH
Confidence 55544433 23456899999999999999999976 99999999863 44433221100 001110 011111111
Q ss_pred ccc--cceEEeeeeeeeecc---eE-EecCceEEeccEEEEccCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEE
Q 022896 73 YLV--NGRIVASPAINITEN---EV-LTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSIL 140 (290)
Q Consensus 73 ~~~--~~~~~~~~v~~~~~~---~v-~~~~~~~~~~~~vi~a~G~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~ 140 (290)
+.. ++++..+.+..++.. .+ .+.++..+.||++|+|+|..|..|+.... .++.+.........+++++
T Consensus 80 ~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ 159 (335)
T 2a87_A 80 QALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIA 159 (335)
T ss_dssp HHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEE
T ss_pred HHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEE
Confidence 111 345666667777652 35 66777889999999999998766552221 1111122223345689999
Q ss_pred EEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcC---
Q 022896 141 IVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS--- 217 (290)
Q Consensus 141 iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~--- 217 (290)
|+|+|.+++|+|..+.. .+.+|+++++.+.+.. .+.+. .+.+++.||+++.++.+++++.+++...+.+.
T Consensus 160 ViG~G~~g~e~a~~l~~--~g~~V~l~~~~~~~~~--~~~~~---~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~ 232 (335)
T 2a87_A 160 VIGGGDSAMEEATFLTR--FARSVTLVHRRDEFRA--SKIML---DRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTN 232 (335)
T ss_dssp EECSSHHHHHHHHHHTT--TCSEEEEECSSSSCSS--CTTHH---HHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEET
T ss_pred EECCCHHHHHHHHHHHH--hCCeEEEEEcCCcCCc--cHHHH---HHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcC
Confidence 99999999999999986 4889999998876532 12222 23456789999999999988766543233332
Q ss_pred CC--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 218 TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 218 ~g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+| +++++|.|++|+|..|+.+++. .++ .++++|++.||++++.++.|+|||+|||++.+
T Consensus 233 ~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~ 293 (335)
T 2a87_A 233 TGAETTLPVTGVFVAIGHEPRSGLVR-EAI--DVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRT 293 (335)
T ss_dssp TSCCEEECCSCEEECSCEEECCTTTB-TTB--CBCTTSCBCCSTTSSBCSSTTEEECGGGTCCS
T ss_pred CCceEEeecCEEEEccCCccChhHhh-ccc--ccCCCccEEeCCCCCccCCCCEEEeeecCCcc
Confidence 34 4799999999999999988886 333 56788999999975444899999999999864
No 66
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=6.9e-34 Score=233.73 Aligned_cols=253 Identities=20% Similarity=0.247 Sum_probs=177.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh---cCCccc--cccccccccccc--cceEEee-e
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM---VEPSFG--KRSVINHTDYLV--NGRIVAS-P 83 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~--~~~~~~~-~ 83 (290)
++||+|||||++|+++|.+|++ |++|+|||+. .++.|...... ...... ......+.+++. ++++..+ .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 3799999999999999999986 9999999864 34444321110 000000 011111112211 3456655 7
Q ss_pred eeeeecc-------eEEecCceEEeccEEEEccCCCCCCC---Cch---HHHHHHHHHHHHHHhcCCeEEEEcCchhHHH
Q 022896 84 AINITEN-------EVLTAEGRRVVYDYLVIATGHKDPVP---KTR---TERLNQYQAENQKIKSARSILIVGGGPTGVE 150 (290)
Q Consensus 84 v~~~~~~-------~v~~~~~~~~~~~~vi~a~G~~~~~p---~~~---~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~ 150 (290)
+..+++. .+.+.++..+.||++|+|+|..|..| +.. ...++.+.........+++++|+|+|.+++|
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 7777542 46677777899999999999885443 321 1111112222234457899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHh-CCcEEEeCceEeecccCCCce-eEEcC---CCc--EEe
Q 022896 151 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TIN 223 (290)
Q Consensus 151 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~ 223 (290)
+|..|.. .+.+|+++++.+.+. .+ ..+.+.+++ .||+++.++.++++..+++.+ .+.+. +|+ +++
T Consensus 159 ~A~~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLAG--IVEHVTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp HHHHHHT--TBSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHH--hCCEEEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 9999986 488999999988762 22 345566776 699999999999888665542 34432 353 689
Q ss_pred ccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 224 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 224 ~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+|.|++|+|..|+.+++... +.++++|++.||+++|+ +.|+|||+|||+..+
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~---l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 282 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGA---VERNRMGEIIIDAKCET-NVKGVFAAGDCTTVP 282 (310)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCCTTCBC-SSTTEEECSTTBSCS
T ss_pred cCEEEEeeCCccCchHHhcc---ccccCCCcEEcCCCCcc-CCCCEEEeecccCCc
Confidence 99999999999998888753 46678899999999996 899999999999976
No 67
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.9e-33 Score=238.48 Aligned_cols=262 Identities=18% Similarity=0.199 Sum_probs=186.3
Q ss_pred CcEEEEcCChHHHHHHHHhcc----CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc--cceEEeeeeeee
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF----SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~----g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 87 (290)
+||+|||||++|+++|.+|++ |++|+|||+++.+.+...............+....+.+++. +++++.+.|+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 689999999999999999954 89999999999765443222111111112222233333332 467778889988
Q ss_pred ecc--eEEecCce----EEeccEEEEccCCCCCCC---CchH-----HHHHHHHHHHHHHhc-CCeEEEEcCch------
Q 022896 88 TEN--EVLTAEGR----RVVYDYLVIATGHKDPVP---KTRT-----ERLNQYQAENQKIKS-ARSILIVGGGP------ 146 (290)
Q Consensus 88 ~~~--~v~~~~~~----~~~~~~vi~a~G~~~~~p---~~~~-----~~~~~~~~~~~~~~~-~~~v~iiG~g~------ 146 (290)
+++ .+.+.++. ++.||+||+|+|..|..| +... ....+.....+.+.. .++++|||+|.
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 876 56666554 489999999999986644 4211 111122222332222 36677899881
Q ss_pred -------------------hHHHHHHHHhhh--CCC----CeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCce
Q 022896 147 -------------------TGVELAGEIAVD--FPE----KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 147 -------------------~~~~~a~~l~~~--~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
.++|++..+... ..+ .+|+++++.+ .++.+++.+.+.+.+.+++.||+++.++.
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~ 240 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFK 240 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCc
Confidence 366777554321 123 4899999987 66777889999999999999999999999
Q ss_pred EeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccc
Q 022896 202 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~ 281 (290)
|++++.+. +.+.+|+++++|.+++++|..|+ +++...+..+ .+++|++.||+++|++++||||++|||++.+.+
T Consensus 241 v~~i~~~~----v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~ 314 (409)
T 3h8l_A 241 IKEIREHE----IVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP 314 (409)
T ss_dssp EEEECSSE----EEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS
T ss_pred eEEECCCe----EEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCC
Confidence 98776532 67788999999999999999986 6777763333 467899999999999889999999999986544
Q ss_pred c
Q 022896 282 A 282 (290)
Q Consensus 282 ~ 282 (290)
+
T Consensus 315 ~ 315 (409)
T 3h8l_A 315 K 315 (409)
T ss_dssp C
T ss_pred c
Confidence 3
No 68
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=5.6e-33 Score=237.96 Aligned_cols=264 Identities=23% Similarity=0.222 Sum_probs=184.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc--cceEEeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 87 (290)
++||+|||||++|+++|++|++ +++|+|||+++.+++...............+....+.+++. +++++.+.++.+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 4799999999999999999964 79999999999876654322222222222222333333332 567778889999
Q ss_pred ecc--eEEecCceEEeccEEEEccCCCCCCCCchH----------HHHHHHHHHHHHHhcCCeEEEEcCchhH------H
Q 022896 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------ERLNQYQAENQKIKSARSILIVGGGPTG------V 149 (290)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~vi~a~G~~~~~p~~~~----------~~~~~~~~~~~~~~~~~~v~iiG~g~~~------~ 149 (290)
+++ .+.++++.++.||++|+|+|+.|.+|+... ..........+.+...++++|||+|+++ +
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~ 161 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHH
Confidence 876 578888888999999999999987775321 1112222222233335667888887653 7
Q ss_pred HHHHHHh----hhC--CCCeEEEEecCcccccc---CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcC--C
Q 022896 150 ELAGEIA----VDF--PEKKVTLVHKGSRLLEF---IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS--T 218 (290)
Q Consensus 150 ~~a~~l~----~~~--~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~--~ 218 (290)
|+|..+. ++. ...+|+++++.+.+... ..+.....+.+.+++.||++++++.|++++. +++.+... +
T Consensus 162 E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~ 239 (430)
T 3h28_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSC
T ss_pred HHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCC
Confidence 7775543 321 12589999988765321 1135778888999999999999999987754 34444432 2
Q ss_pred CcEEeccEEEEccCCCCCchhhcccccccccCCCC-cEEecCCccccCCCCeEEeccccCccc
Q 022896 219 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 219 g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g-~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
++++++|.+++++|..++ +++...+.++ .+++| ++.||+++|++++|||||+|||++.+.
T Consensus 240 g~~i~~D~vv~a~G~~~~-~~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 240 THEVPAKFTMFMPSFQGP-EVVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp EEEEECSEEEEECEEECC-HHHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCC
T ss_pred ceEEeeeEEEECCCCccc-hhHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCC
Confidence 568999999999999875 4555431122 47789 999999999988999999999999764
No 69
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.9e-33 Score=238.25 Aligned_cols=263 Identities=20% Similarity=0.199 Sum_probs=182.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc----CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEEeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF----SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAIN 86 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~----g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~ 86 (290)
++||+|||||++|+++|.+|++ +++|+|||+++.+.+...............+....+.+++ .+++++.+.++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 5899999999999999999964 8999999999976544322222112111222223333333 256788889999
Q ss_pred eecc--eEEecCceEEeccEEEEccCCCCC---CCCch--------HHHHHHHHHH---HHHHhcCCeEEEEcCchhH--
Q 022896 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDP---VPKTR--------TERLNQYQAE---NQKIKSARSILIVGGGPTG-- 148 (290)
Q Consensus 87 ~~~~--~v~~~~~~~~~~~~vi~a~G~~~~---~p~~~--------~~~~~~~~~~---~~~~~~~~~v~iiG~g~~~-- 148 (290)
++++ .+.++++.++.||++|+|+|+.|. +|+.. .....+.... .......++++|||+|+.+
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~ 163 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASC 163 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCC
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCc
Confidence 9876 688888888999999999999854 44421 1122222222 2233335667888886543
Q ss_pred ----HHHHHHHhhh--CCCC----e-EEEEecCcccccc---CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeE
Q 022896 149 ----VELAGEIAVD--FPEK----K-VTLVHKGSRLLEF---IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY 214 (290)
Q Consensus 149 ----~~~a~~l~~~--~~~~----~-v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v 214 (290)
+|+|..+... ..+. + |+++++.+.+... ..+.....+.+.+++.||+++.++.|++++. +++.+
T Consensus 164 ~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~ 241 (437)
T 3sx6_A 164 FGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYV 241 (437)
T ss_dssp CHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEE
T ss_pred CcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEE
Confidence 7777544321 1233 3 9999998876321 1135778888999999999999999987764 34433
Q ss_pred E--cCC-----CcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 215 L--TST-----GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 215 ~--~~~-----g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
. ..+ ++++++|.+++++|..+...+....++ .+++|++.||+++|++++|||||+|||++.+.
T Consensus 242 ~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl---~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 311 (437)
T 3sx6_A 242 TQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL---CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPP 311 (437)
T ss_dssp EEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT---BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCC
T ss_pred EecccCCccccceEEEEeEEEEcCCCcCchhhhccccc---cCCCCcEEeChhccCCCCCCEEEEEEEeccCC
Confidence 3 233 457899999999998876555444454 47889999999999988999999999999764
No 70
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=8.2e-33 Score=246.13 Aligned_cols=264 Identities=17% Similarity=0.164 Sum_probs=183.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCC-C-------Ccccchhhhhhh--------------------cCCc
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPK-E-------YFEITWASLRAM--------------------VEPS 61 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~-~-------~~~~~~~~~~~~--------------------~~~~ 61 (290)
..++||+||||||+|++||.+|++ |++|+|||+. + .+|+.|...... ....
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 446999999999999999999976 9999999973 2 244432111000 0000
Q ss_pred ccc----cccccccc---------------cc--ccceEEeeeeeeeecceEEe--cCc--eEEeccEEEEccCCCCCCC
Q 022896 62 FGK----RSVINHTD---------------YL--VNGRIVASPAINITENEVLT--AEG--RRVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 62 ~~~----~~~~~~~~---------------~~--~~~~~~~~~v~~~~~~~v~~--~~~--~~~~~~~vi~a~G~~~~~p 116 (290)
... ..+..+.+ .+ .+++++.+.+..+++..+.. .+| .++.||+||+|||++|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 000 00000000 01 14566777777777765443 445 4789999999999987766
Q ss_pred CchHHH--HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCc
Q 022896 117 KTRTER--LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 194 (290)
Q Consensus 117 ~~~~~~--~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 194 (290)
+..+.. .............+++++|||+|.+|+|+|..+.. .+.+|+++++. .+++.+++.+...+.+.+++.||
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLAS--LGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGV 341 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCC
Confidence 522211 01111122222356899999999999999999987 48899999988 66777888999999999999999
Q ss_pred EEEeCceEeeccc------CC---CceeE--EcCCCcEEe--ccEEEEccCCCCCchhhcccccccccCCCCcEEecCCc
Q 022896 195 DVKLGERVNLDSV------SE---GSDTY--LTSTGDTIN--ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL 261 (290)
Q Consensus 195 ~~~~~~~v~~i~~------~~---~~~~v--~~~~g~~~~--~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~ 261 (290)
+++.++.++++.. ++ +.+.+ ...+|++++ +|.|++|+|..|+.+++.....+++++++|+|.||+++
T Consensus 342 ~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 9999988776642 12 33333 345776555 99999999999998875433334466788999999999
Q ss_pred cccCCCCeEEeccccCc
Q 022896 262 RVKGQKNIFAIGDITDI 278 (290)
Q Consensus 262 ~~~~~~~vfa~Gd~~~~ 278 (290)
|+ +.|+|||+|||+..
T Consensus 422 ~t-s~~~VyA~GD~~~~ 437 (598)
T 2x8g_A 422 QT-TVSNVYAIGDINAG 437 (598)
T ss_dssp BC-SSTTEEECGGGBTT
T ss_pred cC-CCCCEEEEeeecCC
Confidence 97 79999999999643
No 71
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=4.3e-34 Score=237.11 Aligned_cols=253 Identities=17% Similarity=0.226 Sum_probs=180.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhc----CCccc----cccccccccccc--cceEE-
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV----EPSFG----KRSVINHTDYLV--NGRIV- 80 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~--~~~~~- 80 (290)
++||+|||||++|+++|++|++ |++|+|||+++.+++.|....... .+.+. .+....+.++.. +..+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 5899999999999999999976 999999999999887774321100 01111 111111112221 23444
Q ss_pred eeeeeeeecc-----eEEecCceEEeccEEEEccCC---CCCCCC---chH---HHHHHHHHHHHHHhcCCeEEEEcCch
Q 022896 81 ASPAINITEN-----EVLTAEGRRVVYDYLVIATGH---KDPVPK---TRT---ERLNQYQAENQKIKSARSILIVGGGP 146 (290)
Q Consensus 81 ~~~v~~~~~~-----~v~~~~~~~~~~~~vi~a~G~---~~~~p~---~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~ 146 (290)
...|..++.. .+.+.++. +.||++|+|+|. .|..|. ... ..++. .........+++++|+|+|.
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~ 164 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGD 164 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSH
T ss_pred cCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCH
Confidence 5777777653 45666664 999999999999 655443 211 11111 00011122579999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC-----CcE
Q 022896 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST-----GDT 221 (290)
Q Consensus 147 ~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~-----g~~ 221 (290)
+++++|..+.. .+.+|+++.+.+.+... ....+.+++.||+++.++.++++..+++...+.+.+ +++
T Consensus 165 ~~~e~a~~l~~--~~~~v~~~~~~~~~~~~------~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 236 (332)
T 3lzw_A 165 SAVDWALMLEP--IAKEVSIIHRRDKFRAH------EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI 236 (332)
T ss_dssp HHHHHHHHHTT--TBSEEEEECSSSSCSSC------HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE
T ss_pred hHHHHHHHHHh--hCCeEEEEEecCcCCcc------HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE
Confidence 99999999986 47899999998876321 122345788999999999999988766555555443 357
Q ss_pred EeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 222 INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 222 ~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+++|.|++|+|..|+.++++..++. + ++|++.||+++++ +.|+|||+|||+..+
T Consensus 237 ~~~D~vv~a~G~~p~~~~~~~~~~~--~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 290 (332)
T 3lzw_A 237 LEIDDLIVNYGFVSSLGPIKNWGLD--I-EKNSIVVKSTMET-NIEGFFAAGDICTYE 290 (332)
T ss_dssp EECSEEEECCCEECCCGGGGGSSCC--E-ETTEEECCTTSBC-SSTTEEECGGGEECT
T ss_pred EECCEEEEeeccCCCchHHhhcCcc--c-cCCeEEeCCCCce-ecCCEEEccceecCC
Confidence 9999999999999999998887764 3 6799999999998 799999999999643
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.3e-33 Score=235.31 Aligned_cols=259 Identities=21% Similarity=0.206 Sum_probs=183.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh----cCCccc----cccccccccccc--cceEE
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM----VEPSFG----KRSVINHTDYLV--NGRIV 80 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~--~~~~~ 80 (290)
.++||+|||||++|+++|++|++ |++|+|||+++.+++.|...... ..+.+. ......+.+.+. +..+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 36899999999999999999975 99999999998887766432110 000110 011111111111 23333
Q ss_pred -eeeeeeeecc-----eEEecCceEEeccEEEEccCCC---CCCCCchH--HH-----HHHHHHHHHHHhcCCeEEEEcC
Q 022896 81 -ASPAINITEN-----EVLTAEGRRVVYDYLVIATGHK---DPVPKTRT--ER-----LNQYQAENQKIKSARSILIVGG 144 (290)
Q Consensus 81 -~~~v~~~~~~-----~v~~~~~~~~~~~~vi~a~G~~---~~~p~~~~--~~-----~~~~~~~~~~~~~~~~v~iiG~ 144 (290)
...|+.++.. .+.+.++..+.||++|+|+|.. |..|+... .. ++.... ......+++++|+|+
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~-~~~~~~~~~vvVvG~ 171 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK-SVEDFKGKRVVIVGG 171 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS-CGGGGTTCEEEEECS
T ss_pred cCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC-CHHHcCCCcEEEECC
Confidence 4567777643 4667777789999999999994 44333111 00 100000 001125799999999
Q ss_pred chhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEEc--CCC--
Q 022896 145 GPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT--STG-- 219 (290)
Q Consensus 145 g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~~--~~g-- 219 (290)
|.+++++|..|.. .+.+|+++.+.+.+... +.+.+.+.+.+++.||+++.++.++++..+++.+ .+.+ .+|
T Consensus 172 G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~ 247 (360)
T 3ab1_A 172 GDSALDWTVGLIK--NAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSK 247 (360)
T ss_dssp SHHHHHHHHHTTT--TSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCE
T ss_pred CHHHHHHHHHHHh--cCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCe
Confidence 9999999999986 48899999998766432 3566777888889999999999999888765532 3433 466
Q ss_pred cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 220 DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 220 ~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+++++|.||+|+|+.|+.++++..++. ++ +|++.||+++++ +.|+|||+|||+..+
T Consensus 248 ~~i~~D~vi~a~G~~p~~~~l~~~~~~--~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~ 303 (360)
T 3ab1_A 248 WTVEADRLLILIGFKSNLGPLARWDLE--LY-ENALVVDSHMKT-SVDGLYAAGDIAYYP 303 (360)
T ss_dssp EEEECSEEEECCCBCCSCGGGGGSSCC--EE-TTEEECCTTSBC-SSTTEEECSTTEECT
T ss_pred EEEeCCEEEECCCCCCCHHHHHhhccc--cc-cCeeeecCCCcC-CCCCEEEecCccCCC
Confidence 579999999999999998898876664 34 789999999998 799999999999764
No 73
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-33 Score=237.06 Aligned_cols=260 Identities=17% Similarity=0.232 Sum_probs=178.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCCcccchhhhhhh---cCCccc------------------------
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEYFEITWASLRAM---VEPSFG------------------------ 63 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~~~~~~~~~~~~---~~~~~~------------------------ 63 (290)
++||+|||||++|+++|++|++ |+ +|+|||+++ +|+.|...... ..+.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4899999999999999999976 88 999999998 66544321100 000000
Q ss_pred ---c-ccc-cccccccc--cceEEe-eeeeeeecc----eEEecCceEEeccEEEEccCCC--CCCCCchHHHHHHHHHH
Q 022896 64 ---K-RSV-INHTDYLV--NGRIVA-SPAINITEN----EVLTAEGRRVVYDYLVIATGHK--DPVPKTRTERLNQYQAE 129 (290)
Q Consensus 64 ---~-~~~-~~~~~~~~--~~~~~~-~~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~--~~~p~~~~~~~~~~~~~ 129 (290)
. ..+ ..+..+.. ++.+.. ..|..+++. .+.+.++ .+.||+||+|+|.. |.+|+ ...++. ...
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~--~~~~~~-~~~ 158 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPF--KYGIHY-SEI 158 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCS--SSCEEG-GGC
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCC--Cceech-hhc
Confidence 0 000 00111111 234443 467777654 3555555 68999999999987 55664 111111 011
Q ss_pred HH-HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-------cCChhHHHHHHHHHHhCC-cEEEeCc
Q 022896 130 NQ-KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-------FIGPKAGDKTRDWLISKK-VDVKLGE 200 (290)
Q Consensus 130 ~~-~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g-i~~~~~~ 200 (290)
.. ....+++++|+|+|.+|+|+|..|.. .+.+|+++++.+.+.. .+.+.+.+.+.+.+++.| |+++.++
T Consensus 159 ~~~~~~~~~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~ 236 (369)
T 3d1c_A 159 EDFDNFNKGQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHY 236 (369)
T ss_dssp SCGGGSCSSEEEEECCSHHHHHHHHHHHH--TTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CChhhcCCCEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCc
Confidence 11 11256799999999999999999987 4889999999877653 144566788888899997 9999999
Q ss_pred eEeecccCCCceeEEcCCCcEEe-ccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 201 RVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
.|.+++.+++...+.+.+|+++. +|.+|+|+|+.|+.+++....+ + +++|++.||++++.+++|+||++|||+..+
T Consensus 237 ~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~--~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~ 313 (369)
T 3d1c_A 237 TVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLF--V-TTNQDIKLTTHDESTRYPNIFMIGATVEND 313 (369)
T ss_dssp CEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHS--C-CTTSCCCBCTTSBBSSSTTEEECSTTCCCS
T ss_pred EEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhc--c-CCCCCEEechhhcccCCCCeEEeccccccC
Confidence 99888655566677788887665 6999999999998866665444 3 678999999986666899999999999876
Q ss_pred ccc
Q 022896 280 VSA 282 (290)
Q Consensus 280 ~~~ 282 (290)
...
T Consensus 314 ~~~ 316 (369)
T 3d1c_A 314 NAK 316 (369)
T ss_dssp SCC
T ss_pred Cee
Confidence 654
No 74
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.4e-33 Score=231.87 Aligned_cols=255 Identities=16% Similarity=0.211 Sum_probs=175.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcC----CCCcccchhhhhhhc-CCccc-----ccccccccccc--ccceE
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDP----KEYFEITWASLRAMV-EPSFG-----KRSVINHTDYL--VNGRI 79 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~----~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~--~~~~~ 79 (290)
++||+|||||++|+++|++|++ |++|+|||+ ....++.+....... .+.++ ......+.++. .++++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 5899999999999999999976 999999999 444444332211000 01110 01111111111 13566
Q ss_pred Eeeeeeeeecc----eEEecCceEEeccEEEEccCCCCCCCC---chH-------HHHHHHHHHHHHH--hcCCeEEEEc
Q 022896 80 VASPAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPK---TRT-------ERLNQYQAENQKI--KSARSILIVG 143 (290)
Q Consensus 80 ~~~~v~~~~~~----~v~~~~~~~~~~~~vi~a~G~~~~~p~---~~~-------~~~~~~~~~~~~~--~~~~~v~iiG 143 (290)
..+.+..++.. .+.+ ++..+.+|++|+|+|..|..|+ ... ..++.+....... ..+++++|+|
T Consensus 88 ~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG 166 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIG 166 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEEC
T ss_pred EEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEEC
Confidence 66667777653 3555 6778999999999999855443 211 1111111122222 5689999999
Q ss_pred CchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHH-HHHHhCCcEEEeCceEeecccCCC--ce-eEEcC--
Q 022896 144 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR-DWLISKKVDVKLGERVNLDSVSEG--SD-TYLTS-- 217 (290)
Q Consensus 144 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gi~~~~~~~v~~i~~~~~--~~-~v~~~-- 217 (290)
+|.+++|+|..|.. .+.+|+++++.+.+.. ...+. +.+++.||+++.++.++++..+++ .+ .+.+.
T Consensus 167 ~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~ 238 (333)
T 1vdc_A 167 GGDSAMEEANFLTK--YGSKVYIIHRRDAFRA------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV 238 (333)
T ss_dssp CSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET
T ss_pred CChHHHHHHHHHHh--cCCeEEEEecCCcCCc------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec
Confidence 99999999999986 4889999999876521 12333 445678999999999998887654 32 24332
Q ss_pred -CC--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 218 -TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 218 -~g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+| +++++|.|++|+|..|+.++++ .++ .++++|++.+|++++.++.|+|||+|||++.+
T Consensus 239 ~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~ 300 (333)
T 1vdc_A 239 VTGDVSDLKVSGLFFAIGHEPATKFLD-GGV--ELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKK 300 (333)
T ss_dssp TTCCEEEEECSEEEECSCEEESCGGGT-TSS--CBCTTSCBCCCTTSCBCSSTTEEECGGGGCSS
T ss_pred CCCceEEEecCEEEEEeCCccchHHhh-ccc--cccCCCCEEechhhcccCCCCEEEeeeccCCC
Confidence 45 4789999999999999988886 233 56788999999985334899999999999875
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.98 E-value=9.9e-32 Score=234.87 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=178.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh---cCCcc--ccccccccccccc--cceEEee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM---VEPSF--GKRSVINHTDYLV--NGRIVAS 82 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~--~~~~~~~ 82 (290)
...+||+|||||++|+++|.+|++ |++|+|+|+. .|+.|...... ..... .......+.+.+. ++++..+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 347899999999999999999976 9999999873 44444321110 00000 0011111111111 3455554
Q ss_pred -eeeeeecc-------eEEecCceEEeccEEEEccCCCCC---CCCchH---HHHHHHHHHHHHHhcCCeEEEEcCchhH
Q 022896 83 -PAINITEN-------EVLTAEGRRVVYDYLVIATGHKDP---VPKTRT---ERLNQYQAENQKIKSARSILIVGGGPTG 148 (290)
Q Consensus 83 -~v~~~~~~-------~v~~~~~~~~~~~~vi~a~G~~~~---~p~~~~---~~~~~~~~~~~~~~~~~~v~iiG~g~~~ 148 (290)
.|..+++. .+.+.++..+.||++|+|+|..|. +|+... ..+..+.........+++++|+|+|.+|
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g 367 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSG 367 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHH
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHH
Confidence 77777542 467778888999999999998754 344211 1111111111233468999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHh-CCcEEEeCceEeecccCCCce-eEEcC---CCc--E
Q 022896 149 VELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--T 221 (290)
Q Consensus 149 ~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~~-~v~~~---~g~--~ 221 (290)
+|+|..|... +.+|+++++.+.+.. + ..+.+.+++ .||+++.++.++++..+++.+ .+.+. +|+ +
T Consensus 368 ~E~A~~L~~~--g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~ 439 (521)
T 1hyu_A 368 VEAAIDLAGI--VEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHS 439 (521)
T ss_dssp HHHHHHHHHH--BSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHhh--CCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEE
Confidence 9999999874 889999999877642 1 345666777 699999999999888765543 34432 354 6
Q ss_pred EeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 222 INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 222 ~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+++|.|++|+|..|+.+++... ++++++|++.||+++++ +.|+|||+|||++.+.
T Consensus 440 i~~D~vi~a~G~~pn~~~l~~~---l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~~ 494 (521)
T 1hyu_A 440 VALAGIFVQIGLLPNTHWLEGA---LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVPY 494 (521)
T ss_dssp EECSEEEECCCEEESCGGGTTT---SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCSS
T ss_pred EEcCEEEECcCCCCCchHHhhh---hccCCCCcEEeCCCCCC-CCCCEEEeecccCCCc
Confidence 8999999999999999888762 46678899999999998 7999999999998763
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.9e-31 Score=230.86 Aligned_cols=263 Identities=16% Similarity=0.188 Sum_probs=170.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C-----CcEEEEcCCCCcccchhhhhh--hc------------CCccccc-------
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S-----ADVTLIDPKEYFEITWASLRA--MV------------EPSFGKR------- 65 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g-----~~v~vie~~~~~~~~~~~~~~--~~------------~~~~~~~------- 65 (290)
.+||+|||||++|+++|.+|++ | .+|+|||+++.++.....+.. .+ .+.....
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 5799999999999999999976 7 999999999977633221100 00 0000000
Q ss_pred ---------------ccccccccc----c--cceE-Eeeeeeeeecc---------eEEecCce----EEeccEEEEccC
Q 022896 66 ---------------SVINHTDYL----V--NGRI-VASPAINITEN---------EVLTAEGR----RVVYDYLVIATG 110 (290)
Q Consensus 66 ---------------~~~~~~~~~----~--~~~~-~~~~v~~~~~~---------~v~~~~~~----~~~~~~vi~a~G 110 (290)
....+.+++ . +..+ ....|+.++.. .+.+.++. ++.||+||+|||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 000000111 1 1222 34557666543 45555554 899999999999
Q ss_pred CCCCCCCch----H--HHHHHHHHHH--HHH----hcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--
Q 022896 111 HKDPVPKTR----T--ERLNQYQAEN--QKI----KSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-- 176 (290)
Q Consensus 111 ~~~~~p~~~----~--~~~~~~~~~~--~~~----~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-- 176 (290)
..|.+|+.. . ..++...... ..+ ..+++++|||+|.+|+|+|..|....++.+|+++.+.+.+.+.
T Consensus 190 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~ 269 (463)
T 3s5w_A 190 GTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADD 269 (463)
T ss_dssp CEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCC
T ss_pred CCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccC
Confidence 998887621 1 1111111111 111 1588999999999999999999987678999999998866431
Q ss_pred ------------------CChhHHHHHHHHHHh--------------------------CCcEEEeCceEeecccCCCce
Q 022896 177 ------------------IGPKAGDKTRDWLIS--------------------------KKVDVKLGERVNLDSVSEGSD 212 (290)
Q Consensus 177 ------------------~~~~~~~~~~~~~~~--------------------------~gi~~~~~~~v~~i~~~~~~~ 212 (290)
+.+.....+.+.+.. .|++++.++.|++++.+++++
T Consensus 270 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~ 349 (463)
T 3s5w_A 270 SPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI 349 (463)
T ss_dssp CHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE
T ss_pred CccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE
Confidence 111111112221111 699999999999998877776
Q ss_pred eEEcC---CCc--EEeccEEEEccCCCCC--chhhcccccccccCCCCcEEecCCccccC----CCCeEEeccccCccc
Q 022896 213 TYLTS---TGD--TINADCHFLCTGKPVG--SDWLKDTILKDSLDTHGMLMVDENLRVKG----QKNIFAIGDITDIRV 280 (290)
Q Consensus 213 ~v~~~---~g~--~~~~d~vv~a~G~~~~--~~~l~~~~~~~~~~~~g~~~v~~~~~~~~----~~~vfa~Gd~~~~~~ 280 (290)
.+.+. +|+ ++++|.||+|+|+.|+ .+++...... . |.+.||+++++.. .|+||++|||.....
T Consensus 350 ~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~--~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g 423 (463)
T 3s5w_A 350 ELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEY--L---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG 423 (463)
T ss_dssp EEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGG--B---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC
T ss_pred EEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHH--h---CCcccCcccccccCCCCCCeEEEcCCCcccCC
Confidence 66654 665 4899999999999998 6777665432 1 7899999988743 466999999986444
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=9.5e-32 Score=230.53 Aligned_cols=254 Identities=17% Similarity=0.127 Sum_probs=165.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc--cceEEeeeeeee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 87 (290)
...+||+||||||+||++|++|++ |++|+|||+++.+++.+..- ........+......+++. ++++..+...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g--ip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v-- 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG--IPGFKLEKSVVERRVKLLADAGVIYHPNFEV-- 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT--SCTTTSCHHHHHHHHHHHHHTTCEEETTCCB--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec--CCCccCCHHHHHHHHHHHHHCCcEEEeCCEe--
Confidence 356899999999999999999986 99999999998887654321 0011111111112222221 2333332221
Q ss_pred ecceEEecCceEEeccEEEEccCCC-C---CCCCchHHHH---HHHHHHH-----H----------HHhcCCeEEEEcCc
Q 022896 88 TENEVLTAEGRRVVYDYLVIATGHK-D---PVPKTRTERL---NQYQAEN-----Q----------KIKSARSILIVGGG 145 (290)
Q Consensus 88 ~~~~v~~~~~~~~~~~~vi~a~G~~-~---~~p~~~~~~~---~~~~~~~-----~----------~~~~~~~v~iiG~g 145 (290)
. ..+.+++. ...||+|++|+|+. | .+|+.....+ ..+.... . ....+++|+|||+|
T Consensus 196 ~-~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 196 G-RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp T-TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred c-cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 1 12233332 35799999999996 3 3454221111 1111100 0 01357899999999
Q ss_pred hhHHHHHHHHhhhCCCC-eEEEEecCccc-cccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCC--ceeEE---c--
Q 022896 146 PTGVELAGEIAVDFPEK-KVTLVHKGSRL-LEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG--SDTYL---T-- 216 (290)
Q Consensus 146 ~~~~~~a~~l~~~~~~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~--~~~v~---~-- 216 (290)
.+|+|+|..+... +. +|+++.+.+.. ++.... . .+.+++.||++++++.++++..++. ++.+. .
T Consensus 274 ~~a~d~A~~~~r~--Ga~~Vtiv~r~~~~~~p~~~~----e-~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~ 346 (456)
T 2vdc_G 274 DTAMDCVRTAIRQ--GATSVKCLYRRDRKNMPGSQR----E-VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGV 346 (456)
T ss_dssp HHHHHHHHHHHHT--TCSEEEEECSSCSTTCSSCHH----H-HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEE
T ss_pred hhHHHHHHHHHHc--CCCEEEEEEeCCccCCCCCHH----H-HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecc
Confidence 9999999988753 54 69999988764 332221 2 3457788999999998877754211 12221 0
Q ss_pred --C---------CC--cEEeccEEEEccCCCCCch--hhcccccccccCCCCcEEecCC-ccccCCCCeEEeccccCccc
Q 022896 217 --S---------TG--DTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 217 --~---------~g--~~~~~d~vv~a~G~~~~~~--~l~~~~~~~~~~~~g~~~v~~~-~~~~~~~~vfa~Gd~~~~~~ 280 (290)
. +| .++++|.||+|+|+.|+.. ++...++ +++++|++.+|++ +++ +.|+|||+|||+..+.
T Consensus 347 ~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl--~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~~ 423 (456)
T 2vdc_G 347 ADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPEL--KVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGAS 423 (456)
T ss_dssp EEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTS--CBCTTSSBCCCTTTCBC-SSTTEEECGGGGSSCC
T ss_pred cCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCe--eECCCCCEEECCCCCcC-CCCCEEEeccccCCch
Confidence 1 23 4789999999999999765 6776555 5688999999997 886 7999999999998764
No 78
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=5e-31 Score=220.70 Aligned_cols=252 Identities=17% Similarity=0.195 Sum_probs=161.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcC----------Ccccc-----------cccccc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVE----------PSFGK-----------RSVINH 70 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~----------~~~~~-----------~~~~~~ 70 (290)
++||+|||||++|+++|++|++ |++|+|||+++.+++.|........ +.+.. .....+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 3899999999999999999975 9999999999988877653211100 00000 000001
Q ss_pred ccccc--cceEE-eeeeeeeecc----e-EEecCceEEeccEEEEccCC--CCC---CCCchH---HHHHHHHHHHHHHh
Q 022896 71 TDYLV--NGRIV-ASPAINITEN----E-VLTAEGRRVVYDYLVIATGH--KDP---VPKTRT---ERLNQYQAENQKIK 134 (290)
Q Consensus 71 ~~~~~--~~~~~-~~~v~~~~~~----~-v~~~~~~~~~~~~vi~a~G~--~~~---~p~~~~---~~~~~~~~~~~~~~ 134 (290)
.++.. +..+. ...|+.++.. . +.+.++ .+.||+||+|+|. .|. +|+... ..++..........
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPF 161 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhhc
Confidence 11111 22333 4567777654 2 666666 8999999999995 344 343111 11111111111223
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC-ccccccC--ChhHHHHHHHHHH---------------------
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG-SRLLEFI--GPKAGDKTRDWLI--------------------- 190 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~--------------------- 190 (290)
.+++++|+|+|.+++|+|..|... + +++++.+. +.+.+.. ...+...+.+.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~--~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTV--A-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMV 238 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhh--C-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccC
Confidence 679999999999999999999873 4 69999887 3443321 2222222222222
Q ss_pred -------hCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCC--c
Q 022896 191 -------SKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN--L 261 (290)
Q Consensus 191 -------~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~--~ 261 (290)
+.|+ +.....++++.. ..+.+.+|+++++|.|++|+|+.|+.++++..++ . +++|++.+|++ +
T Consensus 239 ~~~~~~~~~g~-i~~~~~v~~~~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl--~-~~~G~i~vd~~~l~ 310 (357)
T 4a9w_A 239 PPVLDARARGV-LAAVPPPARFSP----TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDL--V-TPQGQVEVDGSGLR 310 (357)
T ss_dssp HHHHHHHHTTC-CCEECCCSEEET----TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTC--B-CTTSCBCBCTTSCB
T ss_pred hhHHHHHhcCc-eEEecCcceEeC----CeeEECCCCEecCCEEEECCCcCCCCcccCcccc--c-CCCCCccccCCccc
Confidence 2333 333444433332 2377889999999999999999999999988776 3 78899999999 5
Q ss_pred cccCCCCeEEec--cccC
Q 022896 262 RVKGQKNIFAIG--DITD 277 (290)
Q Consensus 262 ~~~~~~~vfa~G--d~~~ 277 (290)
++ +.|+|||+| ||++
T Consensus 311 ~t-~~~~vya~Gd~d~~~ 327 (357)
T 4a9w_A 311 AL-AVPSVWLLGYGDWNG 327 (357)
T ss_dssp BS-SCTTEEECSSCGGGS
T ss_pred CC-CCCCeEEeccccccc
Confidence 65 899999999 6665
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=7.1e-30 Score=219.23 Aligned_cols=255 Identities=15% Similarity=0.101 Sum_probs=166.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc--------CCcEEEEcCCCCcccchhhhhhhcCCcc--ccccccccccccc--cceEE
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF--------SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYLV--NGRIV 80 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~--------g~~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~ 80 (290)
.+||+|||||++|+++|.+|.+ +.+|+|||+.+.+++.|. ....+.. ..+....+.+++. +++++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~---~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR---SGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH---HTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc---cccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 4899999999999999999965 899999999987765552 1221211 1122222222222 33444
Q ss_pred eeeeeeeecceEEecCceEEeccEEEEccCCC-C---CCCCchHHHHHHHHHHHH----------HH--hcCCeEEEEcC
Q 022896 81 ASPAINITENEVLTAEGRRVVYDYLVIATGHK-D---PVPKTRTERLNQYQAENQ----------KI--KSARSILIVGG 144 (290)
Q Consensus 81 ~~~v~~~~~~~v~~~~~~~~~~~~vi~a~G~~-~---~~p~~~~~~~~~~~~~~~----------~~--~~~~~v~iiG~ 144 (290)
.+ + .+. ..+.++++ .+.||+||+|||+. + .+|+.....+.+...+.. .. ..+++++|||+
T Consensus 80 ~~-v-~v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~ 155 (456)
T 1lqt_A 80 GN-V-VVG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGN 155 (456)
T ss_dssp ES-C-CBT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECC
T ss_pred ee-E-EEC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECC
Confidence 33 2 132 23444444 47899999999997 3 355532111111111111 11 14789999999
Q ss_pred chhHHHHHHHHhhh-------------------CCCCeEEEEecCccccccCCh-------------------hH-----
Q 022896 145 GPTGVELAGEIAVD-------------------FPEKKVTLVHKGSRLLEFIGP-------------------KA----- 181 (290)
Q Consensus 145 g~~~~~~a~~l~~~-------------------~~~~~v~~~~~~~~~~~~~~~-------------------~~----- 181 (290)
|++|+|+|..|... ....+|+++.+...+...+.+ ++
T Consensus 156 G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~ 235 (456)
T 1lqt_A 156 GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITD 235 (456)
T ss_dssp SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCH
T ss_pred CHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchh
Confidence 99999999998852 123599999998765432221 11
Q ss_pred -------------HHHHHHHHHh------CCcEEEeCceEeecccCCCceeEEcC----------------CC--cEEec
Q 022896 182 -------------GDKTRDWLIS------KKVDVKLGERVNLDSVSEGSDTYLTS----------------TG--DTINA 224 (290)
Q Consensus 182 -------------~~~~~~~~~~------~gi~~~~~~~v~~i~~~~~~~~v~~~----------------~g--~~~~~ 224 (290)
.+.+.+.+++ +||++++++.+.++..++....+.+. +| ++++|
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~ 315 (456)
T 1lqt_A 236 EDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPA 315 (456)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC
T ss_pred hhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEc
Confidence 2334444555 79999999999888765322223222 34 46899
Q ss_pred cEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 225 DCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 225 d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
|.|++|+|++|+. + .++ +++++|++.+|+++|.++.|+|||+|||+..|.
T Consensus 316 d~vi~a~G~~p~~-l---~gl--~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~ 365 (456)
T 1lqt_A 316 QLVVRSVGYRGVP-T---PGL--PFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT 365 (456)
T ss_dssp SEEEECSCEECCC-C---TTS--CCBTTTTBCCEETTEETTCSSEEECTHHHHCSC
T ss_pred CEEEEccccccCC-C---CCC--cccCCCCeeECCCCcCCCCCCEEEEeccCCCCc
Confidence 9999999999976 3 233 567889999999999558999999999987654
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=4.1e-29 Score=215.45 Aligned_cols=244 Identities=15% Similarity=0.184 Sum_probs=159.1
Q ss_pred CCcEEEEcCChHHHHHHHHhc----cCCc---EEEEcCCCCcccchhhhhhh----------------cC----------
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ----FSAD---VTLIDPKEYFEITWASLRAM----------------VE---------- 59 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~----~g~~---v~vie~~~~~~~~~~~~~~~----------------~~---------- 59 (290)
.+||+|||||++|+++|.+|+ +|.+ |+|||+++.+|+.|...... ..
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 379999999999999999995 4899 99999998888777532100 00
Q ss_pred Ccccc--------cccc-------ccccccc--cce--E-Eeeeeeeeecc------eEEecC---c--eEEeccEEEEc
Q 022896 60 PSFGK--------RSVI-------NHTDYLV--NGR--I-VASPAINITEN------EVLTAE---G--RRVVYDYLVIA 108 (290)
Q Consensus 60 ~~~~~--------~~~~-------~~~~~~~--~~~--~-~~~~v~~~~~~------~v~~~~---~--~~~~~~~vi~a 108 (290)
..++. ..+. .+.++.. +.. + .+..|..++.. .|.+.+ + .++.||+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 00000 0000 0111111 111 2 35667776532 355543 3 57899999999
Q ss_pred cC--CCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChh
Q 022896 109 TG--HKDPVPKTRT------ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPK 180 (290)
Q Consensus 109 ~G--~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~ 180 (290)
+| +.|.+|...+ ..++...........+++|+|||+|.+|+|+|..|.. .+.+|+++.+.+.++....
T Consensus 162 tG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~~~~~~~~~-- 237 (464)
T 2xve_A 162 TGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYRTAPMGYKW-- 237 (464)
T ss_dssp CCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHH--TTCSEEEEECSSCCCCCCC--
T ss_pred CCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEECCCCCCCCC--
Confidence 99 5666554111 1111111111122368999999999999999999997 4889999998877644311
Q ss_pred HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecC-
Q 022896 181 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE- 259 (290)
Q Consensus 181 ~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~- 259 (290)
..||+++ ..|+++. ++ .+.+.+|+++++|.||+|+|++|+.+++... +.+.+++++++ ++.
T Consensus 238 ----------~~~V~~~--~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~-~gl~~~~~~~v-~~~~ 299 (464)
T 2xve_A 238 ----------PENWDER--PNLVRVD--TE--NAYFADGSSEKVDAIILCTGYIHHFPFLNDD-LRLVTNNRLWP-LNLY 299 (464)
T ss_dssp ----------CTTEEEC--SCEEEEC--SS--EEEETTSCEEECSEEEECCCBCCCCTTBCTT-TCCCCCSSSCC-SSEE
T ss_pred ----------CCceEEc--CCeEEEe--CC--EEEECCCCEEeCCEEEECCCCCCCCCCcCcc-cccccCCCccc-cccc
Confidence 2478877 6676664 23 4677899999999999999999999998852 23344555455 332
Q ss_pred -C-ccccCCCCeEEeccccCcc
Q 022896 260 -N-LRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 260 -~-~~~~~~~~vfa~Gd~~~~~ 279 (290)
+ +++ +.|+||++||++...
T Consensus 300 ~~~~~t-~~p~i~aiGd~~~~~ 320 (464)
T 2xve_A 300 KGVVWE-DNPKFFYIGMQDQWY 320 (464)
T ss_dssp TTTEES-SSTTEEECSCSCCSS
T ss_pred ceEecC-CCCCEEEEeCccccc
Confidence 2 344 799999999998753
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=2.8e-30 Score=232.83 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=170.3
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc---cceEEeeeee
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV---NGRIVASPAI 85 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~ 85 (290)
....+||+|||||++||++|++|++ |++|+|||+++.+++.+..................+...+. ++++..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~---- 463 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYR---- 463 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEES----
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEE----
Confidence 3456899999999999999999986 99999999999888776543222111111111111111111 122221
Q ss_pred eeecceEEecCceEEeccEEEEccCCCC-----------CCCCchHHHHHHHHHHHH-HHhcCCeEEEEc--CchhHHHH
Q 022896 86 NITENEVLTAEGRRVVYDYLVIATGHKD-----------PVPKTRTERLNQYQAENQ-KIKSARSILIVG--GGPTGVEL 151 (290)
Q Consensus 86 ~~~~~~v~~~~~~~~~~~~vi~a~G~~~-----------~~p~~~~~~~~~~~~~~~-~~~~~~~v~iiG--~g~~~~~~ 151 (290)
...+...++.++.||++|+|||+.| .+|+.....+.+...... ....+++++|+| +|.+|+|+
T Consensus 464 ---~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~ 540 (690)
T 3k30_A 464 ---ESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVV 540 (690)
T ss_dssp ---SCCCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHH
T ss_pred ---CCeecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHH
Confidence 1223344455678999999999873 233322111111222222 334578899999 89999999
Q ss_pred HHHHhhhCCCCeEEEEecCccccccCC-hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEE---cCCCcEEeccEE
Q 022896 152 AGEIAVDFPEKKVTLVHKGSRLLEFIG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL---TSTGDTINADCH 227 (290)
Q Consensus 152 a~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~---~~~g~~~~~d~v 227 (290)
|..|.. .+.+|+++++.+.+..... +.....+.+.+++.||+++.++.|++++.+ +..+. +.+++++++|.|
T Consensus 541 A~~L~~--~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~aD~V 616 (690)
T 3k30_A 541 AELLAQ--KGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG--GVTVRDTYASIERELECDAV 616 (690)
T ss_dssp HHHHHH--TTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT--EEEEEETTTCCEEEEECSEE
T ss_pred HHHHHh--CCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC--eEEEEEccCCeEEEEECCEE
Confidence 999997 4889999999887766543 456778889999999999999999888753 33343 234568999999
Q ss_pred EEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcccccc
Q 022896 228 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSAS 283 (290)
Q Consensus 228 v~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~~~~ 283 (290)
|+|+|..|+..++...... +. ++ +.|+||++|||+..+...+
T Consensus 617 V~A~G~~p~~~l~~~l~~~------~~-------~t-~~~~VyaiGD~~~~~~~~~ 658 (690)
T 3k30_A 617 VMVTARLPREELYLDLVAR------RD-------AG-EIASVRGIGDAWAPGTIAA 658 (690)
T ss_dssp EEESCEEECCHHHHHHHHH------HH-------HT-SCSEEEECGGGTSCBCHHH
T ss_pred EECCCCCCChHHHHHHhhh------hc-------cc-CCCCEEEEeCCCchhhHHH
Confidence 9999999998877664321 11 44 7999999999998765543
No 82
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=4.6e-29 Score=214.45 Aligned_cols=256 Identities=15% Similarity=0.093 Sum_probs=163.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCCCcccchhhhhhhcCCccc--cccccccccccc--cceEEeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYLV--NGRIVASPAI 85 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~v~ 85 (290)
.+||+|||||++|+++|.+|++ + .+|+|||+++.+++.|. ....+.+. ......+.+++. ++.+..+..
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~---~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~- 81 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR---FGVAPDHPEVKNVINTFTQTARSDRCAFYGNVE- 81 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH---HTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCC-
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee---cccCCCCccHHHHHHHHHHHHHhCCcEEEeeeE-
Confidence 5899999999999999999976 6 99999999987765442 11212221 111122222222 233332211
Q ss_pred eeecceEEecCceEEeccEEEEccCCCC----CCCCchHHHHHHHHHHHHH------------HhcCCeEEEEcCchhHH
Q 022896 86 NITENEVLTAEGRRVVYDYLVIATGHKD----PVPKTRTERLNQYQAENQK------------IKSARSILIVGGGPTGV 149 (290)
Q Consensus 86 ~~~~~~v~~~~~~~~~~~~vi~a~G~~~----~~p~~~~~~~~~~~~~~~~------------~~~~~~v~iiG~g~~~~ 149 (290)
+. ..+.+.+. .+.||+||+|||+.+ .+|+.....+..+..+... ...+++++|||+|++|+
T Consensus 82 -v~-~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~ 158 (460)
T 1cjc_A 82 -VG-RDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVAL 158 (460)
T ss_dssp -BT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHH
T ss_pred -Ee-eEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHH
Confidence 11 22333332 468999999999983 3454322222222222111 11478999999999999
Q ss_pred HHHHHHhhh------------------CCCC-eEEEEecCccccccCC-------------------hh-----------
Q 022896 150 ELAGEIAVD------------------FPEK-KVTLVHKGSRLLEFIG-------------------PK----------- 180 (290)
Q Consensus 150 ~~a~~l~~~------------------~~~~-~v~~~~~~~~~~~~~~-------------------~~----------- 180 (290)
|+|..|... ..+. +|+++.+.+.....+. .+
T Consensus 159 e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~ 238 (460)
T 1cjc_A 159 DVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEA 238 (460)
T ss_dssp HHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTS
T ss_pred HHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhc
Confidence 999998830 1344 7999998875411110 00
Q ss_pred ------HHHHHHHHHHh--------------CCcEEEeCceEeecccCC-C-ce-eEEcC---------------CC--c
Q 022896 181 ------AGDKTRDWLIS--------------KKVDVKLGERVNLDSVSE-G-SD-TYLTS---------------TG--D 220 (290)
Q Consensus 181 ------~~~~~~~~~~~--------------~gi~~~~~~~v~~i~~~~-~-~~-~v~~~---------------~g--~ 220 (290)
+.+.+.+.+++ +||++++++.+.++..++ + .+ .+.+. +| +
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~ 318 (460)
T 1cjc_A 239 ARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVE 318 (460)
T ss_dssp CHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceE
Confidence 23334445555 889999999998887553 3 21 22221 34 5
Q ss_pred EEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 221 TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 221 ~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
++++|.|++|+|++|+. + .++ .+++++|++.+|+++|++..|+|||+|||+..+.
T Consensus 319 ~i~~d~Vi~a~G~~p~~-l---~gl-~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~ 373 (460)
T 1cjc_A 319 DLPCGLVLSSIGYKSRP-I---DPS-VPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT 373 (460)
T ss_dssp EEECSEEEECCCEECCC-C---CTT-SCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT
T ss_pred EEEcCEEEECCCCCCCC-C---CCC-cccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC
Confidence 79999999999999976 3 232 0457788999999999844799999999997553
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=1.1e-29 Score=229.80 Aligned_cols=248 Identities=19% Similarity=0.163 Sum_probs=164.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc-cceEE---eeeee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV-NGRIV---ASPAI 85 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~v~ 85 (290)
...+||+|||||++||++|++|++ |++|+|||+++.+++.+....... ... .+....+++. ....+ ...+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~p--g~~--~~~~~~~~~~~~i~~~~~~~~~~v 462 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALP--GLG--EWSYHRDYRETQITKLLKKNKESQ 462 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTST--TCG--GGHHHHHHHHHHHHHHHHHSTTCE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCC--ChH--HHHHHHHHHHHHHHHhhcccCCce
Confidence 446899999999999999999975 999999999998887665432211 110 0111111110 00000 00112
Q ss_pred eeec-ceEEecCceEEeccEEEEccCCCC-----------CCCCch--HHHHHHHHHHHH-HHhcCCeEEEEc--CchhH
Q 022896 86 NITE-NEVLTAEGRRVVYDYLVIATGHKD-----------PVPKTR--TERLNQYQAENQ-KIKSARSILIVG--GGPTG 148 (290)
Q Consensus 86 ~~~~-~~v~~~~~~~~~~~~vi~a~G~~~-----------~~p~~~--~~~~~~~~~~~~-~~~~~~~v~iiG--~g~~~ 148 (290)
.+.. ..+..+++..+.||+||+|||+.| .+|+.. ...+.+....+. ....+++++||| +|.+|
T Consensus 463 ~i~~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g 542 (729)
T 1o94_A 463 LALGQKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMA 542 (729)
T ss_dssp EECSCCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHH
T ss_pred EEEeCeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchH
Confidence 2222 234444555688999999999972 234422 111222222222 233578999999 89999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCcccccc--CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEE--cCCC-cE--
Q 022896 149 VELAGEIAVDFPEKKVTLVHKGSRLLEF--IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL--TSTG-DT-- 221 (290)
Q Consensus 149 ~~~a~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~--~~~g-~~-- 221 (290)
+|+|..|.. .+.+|+++++.+ +... +... ...+.+.+++.||+++.++.++++..+ +..+. ..++ ++
T Consensus 543 ~e~A~~l~~--~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~~ 616 (729)
T 1o94_A 543 PSLAEKLAT--AGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPG--RMEIYNIWGDGSKRTY 616 (729)
T ss_dssp HHHHHHHHH--TTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEETTCSCSCCCC
T ss_pred HHHHHHHHH--cCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECC--eEEEEEecCCceEEec
Confidence 999999987 488999999987 5432 2222 466778889999999999999887643 33333 1232 22
Q ss_pred ----------------EeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCcc
Q 022896 222 ----------------INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 222 ----------------~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
+++|.||+|+|..|+..++..... .+|+++++ ++|+|||+|||+...
T Consensus 617 ~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~----------~vd~~~~t-~~~~VyAiGD~~~~~ 679 (729)
T 1o94_A 617 RGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA----------RESEWAEN-DIKGIYLIGDAEAPR 679 (729)
T ss_dssp CCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH----------TGGGTGGG-TCCEEEECGGGTSCC
T ss_pred ccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh----------hccccccc-CCCCeEEEeCccchh
Confidence 899999999999999887764321 15778887 799999999999743
No 84
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=6.9e-29 Score=231.74 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=165.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCCcccchhhhhhhcCCcc--ccccccccccccc--cceEEeeeee
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYLV--NGRIVASPAI 85 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~v~ 85 (290)
..+||+||||||+|+++|.+|++ |+ +|+|||+.+.+|+.+.. .+ +.+ .........+++. ++++..+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~---~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS---EI-PQFRLPYDVVNFEIELMKDLGVKIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH---TS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc---cC-CcccCCHHHHHHHHHHHHHCCcEEEcccEe
Confidence 36899999999999999999976 98 79999999887765421 11 111 1111111111211 3444444332
Q ss_pred eeecceEEecCceEEeccEEEEccCCC-CCCC----Cch-HHHH---HHHHHHHHH-------------HhcCCeEEEEc
Q 022896 86 NITENEVLTAEGRRVVYDYLVIATGHK-DPVP----KTR-TERL---NQYQAENQK-------------IKSARSILIVG 143 (290)
Q Consensus 86 ~~~~~~v~~~~~~~~~~~~vi~a~G~~-~~~p----~~~-~~~~---~~~~~~~~~-------------~~~~~~v~iiG 143 (290)
. ...+.++++..+.||+||+|||+. |..+ +.. ...+ .++...... ...+++++|||
T Consensus 262 ~--~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIG 339 (1025)
T 1gte_A 262 S--ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLG 339 (1025)
T ss_dssp S--TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEEC
T ss_pred c--cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEEC
Confidence 2 123444455557899999999994 5533 211 1111 122111111 12357999999
Q ss_pred CchhHHHHHHHHhhhCCC-CeEEEEecCcc-ccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEEc----
Q 022896 144 GGPTGVELAGEIAVDFPE-KKVTLVHKGSR-LLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT---- 216 (290)
Q Consensus 144 ~g~~~~~~a~~l~~~~~~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~~---- 216 (290)
+|.+|+|+|..+.. .+ .+|+++++.+. .++.+++++ +.+++.||+++.++.++++..+++.+ .+.+
T Consensus 340 gG~~g~e~A~~~~~--~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~ 412 (1025)
T 1gte_A 340 AGDTAFDCATSALR--CGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE 412 (1025)
T ss_dssp SSHHHHHHHHHHHH--TTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHH--cCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeE
Confidence 99999999999886 35 48999998873 333333222 46778899999999988876544432 2222
Q ss_pred --CCC---------cEEeccEEEEccCCCC-Cchhhcc-cccccccCCCCcEEecC-CccccCCCCeEEeccccCccc
Q 022896 217 --STG---------DTINADCHFLCTGKPV-GSDWLKD-TILKDSLDTHGMLMVDE-NLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 217 --~~g---------~~~~~d~vv~a~G~~~-~~~~l~~-~~~~~~~~~~g~~~v~~-~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
.+| .++++|.||+|+|..| +..++.. .++ +++++|++.||+ +++| +.|+|||+|||++.+.
T Consensus 413 ~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl--~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~ 487 (1025)
T 1gte_A 413 QDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPI--KFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMAN 487 (1025)
T ss_dssp ECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTS--CBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCC
T ss_pred EcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCc--eECCCCCEEECCCCCcc-CCCCEEEeCCCCCCch
Confidence 122 3689999999999975 4556554 244 567889999997 7887 7999999999998654
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=1.8e-28 Score=227.48 Aligned_cols=250 Identities=16% Similarity=0.164 Sum_probs=167.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhh-hhcCCcccccccccccc-c--cccceEE-eeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR-AMVEPSFGKRSVINHTD-Y--LVNGRIV-ASPAIN 86 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~~v~~ 86 (290)
++||+||||||+|++||.+|++ |++|+|||+++.+++.+.... ..+......+......+ + ..++++. ...|..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 5899999999999999999976 999999999988876655210 11111100111111111 1 1133333 234544
Q ss_pred eecc-------------eEEe------cCceEEeccEEEEccCCCCC---CCCchHHHH---HHHHHHHHH--HhcCCeE
Q 022896 87 ITEN-------------EVLT------AEGRRVVYDYLVIATGHKDP---VPKTRTERL---NQYQAENQK--IKSARSI 139 (290)
Q Consensus 87 ~~~~-------------~v~~------~~~~~~~~~~vi~a~G~~~~---~p~~~~~~~---~~~~~~~~~--~~~~~~v 139 (290)
++.. .+.. .++.++.||++|+|||+.|. +|+.....+ ..+...... ...++++
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~v 287 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARI 287 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSE
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeE
Confidence 4432 1111 12347899999999999754 343222111 122222221 1246899
Q ss_pred EEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccC-CCc-eeEEcC
Q 022896 140 LIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS-EGS-DTYLTS 217 (290)
Q Consensus 140 ~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~-~~~-~~v~~~ 217 (290)
+|+|+|++++|+|..|... +.+|+++++.+.+.. . .+.+++.||+++.++.++++..+ ++. ..+.+.
T Consensus 288 vViGgG~~g~E~A~~L~~~--G~~Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 288 AVATTNDSAYELVRELAAT--GGVVAVIDARSSISA----A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp EEEESSTTHHHHHHHHGGG--TCCSEEEESCSSCCH----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred EEEcCCHHHHHHHHHHHHc--CCcEEEEECCCccch----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 9999999999999999874 778999999887542 1 56688999999999999988763 332 234333
Q ss_pred C-------C--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCcc----ccCCCCeEEeccccCcccc
Q 022896 218 T-------G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLR----VKGQKNIFAIGDITDIRVS 281 (290)
Q Consensus 218 ~-------g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~----~~~~~~vfa~Gd~~~~~~~ 281 (290)
+ | +++++|.|++|+|..|+.+++... .+.+.+|++++ .++.|+|||+|||++.+..
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~--------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR--------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT--------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH
T ss_pred eccccCCCCceEEEEcCEEEECCCcCcChHHHHhC--------CCcEEEcCcccccccCCCCCCEEEEEecCCchhH
Confidence 2 4 579999999999999998887653 35788888776 2479999999999987643
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=3.6e-28 Score=209.19 Aligned_cols=245 Identities=17% Similarity=0.236 Sum_probs=158.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCCcccchhhhhhhc---------------------------CC-
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLRAMV---------------------------EP- 60 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~~~~~~~~~~~~---------------------------~~- 60 (290)
+.+||+|||||++||++|.+|++ |. +|+|||+++..++.|....... ..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 36899999999999999999976 88 9999999987776664321000 00
Q ss_pred ----------------cc--ccc--------cc-cccccccc--cc-eEEeeeeeeeecc----eEEecC---ce---EE
Q 022896 61 ----------------SF--GKR--------SV-INHTDYLV--NG-RIVASPAINITEN----EVLTAE---GR---RV 100 (290)
Q Consensus 61 ----------------~~--~~~--------~~-~~~~~~~~--~~-~~~~~~v~~~~~~----~v~~~~---~~---~~ 100 (290)
.+ ... .+ ..+.++.. .. -.++..|+.++.. .+.+.+ |. .+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEE
Confidence 00 000 00 00001111 11 2245677776543 355544 55 78
Q ss_pred eccEEEEccCC--CCCCCCchH-HHH--------HHHHHHHH-HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCe-EEEE
Q 022896 101 VYDYLVIATGH--KDPVPKTRT-ERL--------NQYQAENQ-KIKSARSILIVGGGPTGVELAGEIAVDFPEKK-VTLV 167 (290)
Q Consensus 101 ~~~~vi~a~G~--~~~~p~~~~-~~~--------~~~~~~~~-~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~-v~~~ 167 (290)
.||+||+|+|. .|.+|...+ ... .+...... ....+++|+|||+|.+|+|+|..|.. .+.+ |+++
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~ 242 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP--VAKHPIYQS 242 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT--TSCSSEEEE
T ss_pred EeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH--HhCCcEEEE
Confidence 99999999998 566554221 110 00011111 12368999999999999999999986 3677 9999
Q ss_pred ecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcE-EeccEEEEccCCCCCchh-----hc
Q 022896 168 HKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDT-INADCHFLCTGKPVGSDW-----LK 241 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~-~~~d~vv~a~G~~~~~~~-----l~ 241 (290)
.+.+.+ ++..||++ ...|+++..+++ .+.+.+|++ +++|.||+|+|++|+.++ ++
T Consensus 243 ~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~ 303 (447)
T 2gv8_A 243 LLGGGD---------------IQNESLQQ--VPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK 303 (447)
T ss_dssp CTTCCS---------------CBCSSEEE--ECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC
T ss_pred eCCCCc---------------CCCCCeEE--ecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCCcCCCCCcccccc
Confidence 988754 33457764 466766654333 567778876 689999999999999999 76
Q ss_pred ccccccccCCCCcEEecCCccc--cCCCCeEEeccccCcc
Q 022896 242 DTILKDSLDTHGMLMVDENLRV--KGQKNIFAIGDITDIR 279 (290)
Q Consensus 242 ~~~~~~~~~~~g~~~v~~~~~~--~~~~~vfa~Gd~~~~~ 279 (290)
..+..+ ..++.+.++.+.+. ++.|+||++||+....
T Consensus 304 ~~~~~i--~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~ 341 (447)
T 2gv8_A 304 SPETKL--IDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV 341 (447)
T ss_dssp STTTCC--CSSSSSCCSEETTTEETTCTTEEESSCCBSSC
T ss_pred cccCce--ecCCCcccccccccccCCCCcEEEEecccccc
Confidence 543222 23455555544331 4799999999998764
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.95 E-value=3.3e-28 Score=211.40 Aligned_cols=230 Identities=17% Similarity=0.140 Sum_probs=159.8
Q ss_pred CCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCCcccchhhhhhhc-C-Cccccccccccccc-cccceE-Eeeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAMV-E-PSFGKRSVINHTDY-LVNGRI-VASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~-~~~~v~~~~ 88 (290)
++||+|||||++|+++|++|++.++|+|||+++.+++.+....... . +....+....+.+. ..++++ ....+..++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i~ 187 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGVF 187 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCCE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 5799999999999999999964499999999998877654322110 0 00011111111111 123333 245555555
Q ss_pred cc--eE--Ee-cCce--EEeccEEEEccCCCCCCC---CchHH---HHHHHHHHHHH--HhcCCeEEEEcCchhHHHHHH
Q 022896 89 EN--EV--LT-AEGR--RVVYDYLVIATGHKDPVP---KTRTE---RLNQYQAENQK--IKSARSILIVGGGPTGVELAG 153 (290)
Q Consensus 89 ~~--~v--~~-~~~~--~~~~~~vi~a~G~~~~~p---~~~~~---~~~~~~~~~~~--~~~~~~v~iiG~g~~~~~~a~ 153 (290)
.. .+ .. .++. .+.||++++|||+.|..| +.... ....+...... ...+++++|+|+|..+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--- 264 (493)
T 1y56_A 188 DKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--- 264 (493)
T ss_dssp ECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH---
T ss_pred cCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH---
Confidence 43 11 11 3343 689999999999985543 32211 11222222222 234689999999999877
Q ss_pred HHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCC
Q 022896 154 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 154 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
+.+++.|++++.++.+++++.+++...+.+.+|+++++|.||+|+|.
T Consensus 265 ---------------------------------~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 265 ---------------------------------QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp ---------------------------------HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE
T ss_pred ---------------------------------HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc
Confidence 45677899999999999888665545667788889999999999999
Q ss_pred CCCchhhcccccccccCCCCcEE-ecCCccccCCCCeEEeccccCccc
Q 022896 234 PVGSDWLKDTILKDSLDTHGMLM-VDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~g~~~-v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+|+.+++...++.+.++++|++. +|++++ +.|+||++|||++.+.
T Consensus 312 ~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~GD~~~~~~ 357 (493)
T 1y56_A 312 RPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVAGSAVSIKP 357 (493)
T ss_dssp EECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEECSTTTCCCC
T ss_pred CcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEEeccCCccC
Confidence 99999999988876667789888 899988 6899999999998653
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=2.2e-27 Score=207.67 Aligned_cols=158 Identities=20% Similarity=0.187 Sum_probs=103.8
Q ss_pred CCcEEEEcCChHHHHHHHHhc-c-CCcEEEEcCCCCcccchhhhhhh----------cCCccc----------c------
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASLRAM----------VEPSFG----------K------ 64 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~-g~~v~vie~~~~~~~~~~~~~~~----------~~~~~~----------~------ 64 (290)
++||+|||||++|+++|.+|+ + |.+|+|||+++.+|+.|.....- ....+. .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 589999999999999999998 6 99999999999888776532100 000000 0
Q ss_pred ccccccccccc--c---ceEEeeeeeeeecc------eEEecCceEEeccEEEEccCC--CCCCC---Cch---HHHHHH
Q 022896 65 RSVINHTDYLV--N---GRIVASPAINITEN------EVLTAEGRRVVYDYLVIATGH--KDPVP---KTR---TERLNQ 125 (290)
Q Consensus 65 ~~~~~~~~~~~--~---~~~~~~~v~~~~~~------~v~~~~~~~~~~~~vi~a~G~--~~~~p---~~~---~~~~~~ 125 (290)
+....+..... + .-.....|+.++.. .+.+.+|.++.||+||+|+|. .|..| +.. ...++.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 167 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHT 167 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEe
Confidence 00000000110 1 12345566666532 477788888999999999994 55544 321 111222
Q ss_pred HHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 022896 126 YQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (290)
Q Consensus 126 ~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~ 172 (290)
..........+++|+|||+|.+|+|+|..|.. .+.+|+++.+.+.
T Consensus 168 ~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 168 AAWPEGKSLAGRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRTPQ 212 (540)
T ss_dssp GGCCSSCCCTTSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESSCC
T ss_pred ecCCCccccccceEEEECCCchHHHHHHHHHh--hCCEEEEEECCCC
Confidence 21111222467999999999999999999986 4899999999887
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=2.1e-26 Score=207.13 Aligned_cols=238 Identities=16% Similarity=0.187 Sum_probs=157.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc--cceEEeeeeeee
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 87 (290)
...+||+|||||++|+++|.+|++ |++|+|||+++.+++.+.............+....+..++. ++++..+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~--- 447 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHT--- 447 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCC---
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcE---
Confidence 346899999999999999999976 99999999999888776533221111110111111111111 233332221
Q ss_pred ecceEEecCceEE-eccEEEEccCCCCCCCC---chHHHHHHHHHHHH-HHhcCCeEEEEcCchhHHHHHHHHhhhCC--
Q 022896 88 TENEVLTAEGRRV-VYDYLVIATGHKDPVPK---TRTERLNQYQAENQ-KIKSARSILIVGGGPTGVELAGEIAVDFP-- 160 (290)
Q Consensus 88 ~~~~v~~~~~~~~-~~~~vi~a~G~~~~~p~---~~~~~~~~~~~~~~-~~~~~~~v~iiG~g~~~~~~a~~l~~~~~-- 160 (290)
+.. ..+ .||+||+|||+.|..|+ .....+.++..... ....+++++|||+|.+|+|+|..|.....
T Consensus 448 ----v~~---~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~v 520 (671)
T 1ps9_A 448 ----VTA---DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGEST 520 (671)
T ss_dssp ----CCS---SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCG
T ss_pred ----ecH---HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCc
Confidence 111 123 89999999999866554 22111112222222 22357999999999999999999875310
Q ss_pred ---------------------------------CCeEEEEecCcccc-ccCChhHHHHHHHHHHhCCcEEEeCceEeecc
Q 022896 161 ---------------------------------EKKVTLVHKGSRLL-EFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 206 (290)
Q Consensus 161 ---------------------------------~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~ 206 (290)
..+++++.+.+... ..+++.....+.+.+++.||+++.++.+++++
T Consensus 521 tv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 600 (671)
T 1ps9_A 521 SQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID 600 (671)
T ss_dssp GGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE
T ss_pred ccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe
Confidence 14677777765443 23556677778888999999999999998776
Q ss_pred cCCCceeEEcCCC--cEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 207 VSEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 207 ~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
. +++.+. .+| +++++|.||+|+|..|+..++.... . ..++||++|||+....
T Consensus 601 ~--~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~------------------~-~g~~v~aiGD~~~~~~ 654 (671)
T 1ps9_A 601 D--DGLHVV-INGETQVLAVDNVVICAGQEPNRALAQPLI------------------D-SGKTVHLIGGCDVAME 654 (671)
T ss_dssp T--TEEEEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH------------------T-TTCCEEECGGGTCCSS
T ss_pred C--CeEEEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH------------------h-cCCCEEEECCcCccCc
Confidence 3 344444 566 5799999999999999988776421 1 2479999999998764
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=6.6e-26 Score=198.49 Aligned_cols=160 Identities=19% Similarity=0.193 Sum_probs=102.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh--------------cCC------cccccc--cc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM--------------VEP------SFGKRS--VI 68 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~--------------~~~------~~~~~~--~~ 68 (290)
.++||+|||||++|+++|.+|++ |.+|+|||+++.+|+.|.....- ..+ .+.... ..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 46899999999999999999976 99999999999888776421110 000 000000 00
Q ss_pred cccccc----cc-----ceEEeeeeeeeecc------eEEecCceEEeccEEEEccC--CCCCCC---Cch---HHHHHH
Q 022896 69 NHTDYL----VN-----GRIVASPAINITEN------EVLTAEGRRVVYDYLVIATG--HKDPVP---KTR---TERLNQ 125 (290)
Q Consensus 69 ~~~~~~----~~-----~~~~~~~v~~~~~~------~v~~~~~~~~~~~~vi~a~G--~~~~~p---~~~---~~~~~~ 125 (290)
....++ .. .-.+...|+.++.+ .|.+++|.++.||+||+|+| +.|..| +.. ...++.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~ 167 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHS 167 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEc
Confidence 000111 00 11234566666532 57788888999999999999 565544 421 111222
Q ss_pred HHHHHH-------HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 126 YQAENQ-------KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 126 ~~~~~~-------~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
...... ....+++|+|||+|.+|+|+|..|.. .+.+|+++.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 168 SRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRTPNW 220 (545)
T ss_dssp GGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESSCCC
T ss_pred ccccccccccccccccCCCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcCCCc
Confidence 211111 12357999999999999999999996 48899999998863
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.91 E-value=4e-25 Score=193.70 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=104.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhh-----hc-----CCcccc---------ccc---c
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA-----MV-----EPSFGK---------RSV---I 68 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~-----~~-----~~~~~~---------~~~---~ 68 (290)
.++||+|||||++|+++|.+|++ |.+|+|||+++.+|+.|..... .. ...+.. ..+ .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 45899999999999999999976 9999999999988877652211 00 000000 000 0
Q ss_pred cccccc----c--c---ceEEeeeeeeeecc------eEEecCceEEeccEEEEccC--CCCCCC---Cch---HHHHHH
Q 022896 69 NHTDYL----V--N---GRIVASPAINITEN------EVLTAEGRRVVYDYLVIATG--HKDPVP---KTR---TERLNQ 125 (290)
Q Consensus 69 ~~~~~~----~--~---~~~~~~~v~~~~~~------~v~~~~~~~~~~~~vi~a~G--~~~~~p---~~~---~~~~~~ 125 (290)
...+++ . + .-.+...|+.++.+ .+.+.+|.++.||+||+|+| +.|..| +.. ...++.
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 179 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHT 179 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEe
Confidence 000111 0 1 11234566666432 57778888899999999999 555544 421 111222
Q ss_pred HHHH-HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 126 YQAE-NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 126 ~~~~-~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
.... ......+++|+|||+|.+|+|+|..|... +.+|+++.|.+.+
T Consensus 180 ~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~--~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 180 ARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQ--AEQLFVFQRSANY 226 (549)
T ss_dssp GGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCC
T ss_pred ccccccccccCCCEEEEECCCchHHHHHHHHHhh--CCEEEEEECCCCc
Confidence 1111 01123689999999999999999999974 7899999998863
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.89 E-value=1.7e-23 Score=183.88 Aligned_cols=160 Identities=18% Similarity=0.261 Sum_probs=101.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhh----------cCCcccc---------cccc---
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM----------VEPSFGK---------RSVI--- 68 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~----------~~~~~~~---------~~~~--- 68 (290)
.++||+|||||++|+++|.+|++ |.+|+|||+++.+|+.|.....- ....+.. ..+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35899999999999999999976 99999999999888776421100 0000000 0000
Q ss_pred ccccccc--------cce-EEeeeeeeeecc------eEEecCceEEeccEEEEccCC--CCCCCCch------HHHHHH
Q 022896 69 NHTDYLV--------NGR-IVASPAINITEN------EVLTAEGRRVVYDYLVIATGH--KDPVPKTR------TERLNQ 125 (290)
Q Consensus 69 ~~~~~~~--------~~~-~~~~~v~~~~~~------~v~~~~~~~~~~~~vi~a~G~--~~~~p~~~------~~~~~~ 125 (290)
.+.+++. ... .....|..++.+ .+.+.+|.++.+|+||+|+|. .|..|... +..++.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs 174 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHT 174 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEC
Confidence 0011110 111 234556665432 466777878999999999995 45554311 111222
Q ss_pred HHHHHH-HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 126 YQAENQ-KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 126 ~~~~~~-~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
...... ....+++++|||+|.+|++++..+... +.+|+++.+.+.+
T Consensus 175 ~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 175 GNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTPHF 221 (542)
T ss_dssp GGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCC
T ss_pred CCCCCchhccCCCEEEEECCCccHHHHHHHHhhc--CceEEEEEcCCcc
Confidence 111101 113579999999999999999999874 7899999987755
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.88 E-value=6.2e-21 Score=165.84 Aligned_cols=179 Identities=13% Similarity=0.171 Sum_probs=110.2
Q ss_pred eEEeccEEEEccCCCCCCCC---chHHHHHHHHHH------HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEe
Q 022896 98 RRVVYDYLVIATGHKDPVPK---TRTERLNQYQAE------NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVH 168 (290)
Q Consensus 98 ~~~~~~~vi~a~G~~~~~p~---~~~~~~~~~~~~------~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~ 168 (290)
.++.++.||+|+|..|.+|+ ..+..+|+.... ......+|+|+|||+|.||+|++..|.+...+.+|+++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 46889999999999888886 222222222211 112247899999999999999999998766788999999
Q ss_pred cCcccccc---------CChhHHH-------------------------------HHHHHH-----H-----hCCcEEEe
Q 022896 169 KGSRLLEF---------IGPKAGD-------------------------------KTRDWL-----I-----SKKVDVKL 198 (290)
Q Consensus 169 ~~~~~~~~---------~~~~~~~-------------------------------~~~~~~-----~-----~~gi~~~~ 198 (290)
|++.+.+. +.+.... .+.+.+ . .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 98754321 1111111 111111 1 01224556
Q ss_pred CceEeecccCCCc--e------------eEEcCCCcEEeccEEEEccCCCCCc-hhhcccccccccCCCCcEEecCCccc
Q 022896 199 GERVNLDSVSEGS--D------------TYLTSTGDTINADCHFLCTGKPVGS-DWLKDTILKDSLDTHGMLMVDENLRV 263 (290)
Q Consensus 199 ~~~v~~i~~~~~~--~------------~v~~~~g~~~~~d~vv~a~G~~~~~-~~l~~~~~~~~~~~~g~~~v~~~~~~ 263 (290)
+..+..+...... + .+.+.+|+++++|.||+|||++++. ++|....-.+..+.+|.+.|+++++.
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~ 438 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRV 438 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEE
Confidence 6666555433221 2 2345678899999999999998864 33333222335577788889887654
Q ss_pred c-------CCCCeEEecccc
Q 022896 264 K-------GQKNIFAIGDIT 276 (290)
Q Consensus 264 ~-------~~~~vfa~Gd~~ 276 (290)
. ..++||+.|-+-
T Consensus 439 ~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 439 EMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp CCCTTTBCTTCEEEECSCCH
T ss_pred eecCCccCCCceEEecCCCc
Confidence 1 246799998553
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.82 E-value=1.3e-19 Score=136.58 Aligned_cols=133 Identities=22% Similarity=0.206 Sum_probs=112.7
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------cC-----ChhHHHHHHHHHHhCCcEEEeCceEe
Q 022896 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------FI-----GPKAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 138 ~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
+++|||+|++|+++|..|.+ .+.+|+++++.+..+. .+ .+++.+.+.+.+++.|++++.+ +++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~ 79 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVK 79 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCC
T ss_pred eEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEE
Confidence 68999999999999999997 4889999998875442 12 3578888999999999999999 998
Q ss_pred ecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccCccc
Q 022896 204 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 280 (290)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~~~~ 280 (290)
+++.+++.+.+.+.+| ++++|.||+|+|..|+ +++..++ +++ +|++.||+++|+ +.|+|||+|||+..+.
T Consensus 80 ~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~--~~~-~g~i~vd~~~~t-~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 80 GVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT--LPSLLGL--TRR-GAYIDTDEGGRT-SYPRVYAAGVARGKVP 149 (180)
T ss_dssp EEEECSSSEEEECSSC-EEEEEEEEECCTTCCH--HHHHHTC--CEE-TTEECCCTTCBC-SSTTEEECGGGGTCCS
T ss_pred EEEEcCCEEEEEECCC-EEEECEEEECCCCCCC--ccccCCC--Ccc-CceEEeCCCCCc-CCCCEEEeecccCcch
Confidence 8887777788888888 8999999999999973 4555555 456 889999999998 7999999999999764
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.57 E-value=4.9e-16 Score=134.10 Aligned_cols=159 Identities=13% Similarity=0.085 Sum_probs=91.0
Q ss_pred ceEEeccEEEEccCCCCCCCC-------chHHHHHHHHHHHHHHh-----cCC-eEEEEcCchhHHHHHHHHhhhCCCCe
Q 022896 97 GRRVVYDYLVIATGHKDPVPK-------TRTERLNQYQAENQKIK-----SAR-SILIVGGGPTGVELAGEIAVDFPEKK 163 (290)
Q Consensus 97 ~~~~~~~~vi~a~G~~~~~p~-------~~~~~~~~~~~~~~~~~-----~~~-~v~iiG~g~~~~~~a~~l~~~~~~~~ 163 (290)
+.++.++.+|+|||..+..+. .....+.-.......+. ... .++++|++ +.+++..+.. .+..
T Consensus 160 ~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~--~G~~ 235 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRG--EGAQ 235 (472)
T ss_dssp EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHH--TTCE
T ss_pred CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcC--CceE
Confidence 345789999999999843322 22223222211100011 112 23344554 5556665654 3556
Q ss_pred EEEEecCccccccCChhH--------HHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEe-ccEEEEccCCC
Q 022896 164 VTLVHKGSRLLEFIGPKA--------GDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKP 234 (290)
Q Consensus 164 v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~ 234 (290)
+ +..++++|+..+++.. ...+.+.+++.|. ++.+... + ++ + .+.++ .+.++++.|..
T Consensus 236 ~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~--~~----~----~~~~~~~~~~~~~~G~d 301 (472)
T 2e5v_A 236 I-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I--ED----F----ERKFPVVAKYLARHGHN 301 (472)
T ss_dssp E-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C--TT----H----HHHCHHHHHHHHHTTCC
T ss_pred E-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h--HH----H----HHHhHHHHHHHHHhCcC
Confidence 6 6777888876555433 5566666766653 3322210 1 00 0 01233 46778888998
Q ss_pred CCchhhcccccccccCCCCcEEecCCccccCCCCeEEeccccC
Q 022896 235 VGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD 277 (290)
Q Consensus 235 ~~~~~l~~~~~~~~~~~~g~~~v~~~~~~~~~~~vfa~Gd~~~ 277 (290)
|+ .+++.... .....|.|.||.++|+ +.|+|||+|||+.
T Consensus 302 p~-~~i~v~p~--~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 302 YK-VKIPIFPA--AHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp TT-SCEECEEE--EEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred cc-cceEeehh--hceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 87 55543221 1234689999999998 7999999999987
No 96
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.55 E-value=8.7e-16 Score=131.51 Aligned_cols=97 Identities=12% Similarity=0.025 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccC--------CCCCchhhcccccccccCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG--------KPVGSDWLKDTILKDSLDT 251 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G--------~~~~~~~l~~~~~~~~~~~ 251 (290)
.+...+...+++.| +++++++|++++.+++++.+.+.+|+++.+|.||+|+| +.|+.+......+.. ...
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~~~ 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-GHG 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-CCC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-CCC
Confidence 44555566666677 99999999999988888889888888899999999999 667665544433322 123
Q ss_pred CCcEEecCCccccCCCCeEEeccccCcc
Q 022896 252 HGMLMVDENLRVKGQKNIFAIGDITDIR 279 (290)
Q Consensus 252 ~g~~~v~~~~~~~~~~~vfa~Gd~~~~~ 279 (290)
...+.|+..+++ ..+++|+.||+....
T Consensus 283 ~~~~kv~~~~~~-~~~~i~~~~d~~~~~ 309 (431)
T 3k7m_X 283 GQGLKILIHVRG-AEAGIECVGDGIFPT 309 (431)
T ss_dssp CCEEEEEEEEES-CCTTEEEEBSSSSSE
T ss_pred cceEEEEEEECC-CCcCceEcCCCCEEE
Confidence 345888988888 579999999985543
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.49 E-value=6.1e-18 Score=139.49 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=35.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhc--c-CCcEEEEcCCCCcccch
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQ--F-SADVTLIDPKEYFEITW 51 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~--~-g~~v~vie~~~~~~~~~ 51 (290)
..+||+||||||+||+||++|+ + |++|+|||+++.+|+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~ 106 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceE
Confidence 4689999999999999999995 3 99999999999887654
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.48 E-value=4.3e-13 Score=113.68 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
..+...+.+.+++.|++++.++.|+++..+++++.+.+.+| ++.+|.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 36788888999999999999999999988777788888887 8999999999998763
No 99
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.47 E-value=2.5e-13 Score=114.19 Aligned_cols=61 Identities=8% Similarity=-0.096 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
..+...+.+.+++.|++++.+++|++++.+++++.+.+.+| ++.+|.||+|+|.+. ..++.
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s-~~l~~ 214 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC-DAIAG 214 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH-HHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH-HHHHH
Confidence 36888899999999999999999999988777788888887 899999999999874 33443
No 100
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.39 E-value=3.3e-12 Score=107.44 Aligned_cols=63 Identities=10% Similarity=-0.106 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhccc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT 243 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~~ 243 (290)
..+...+.+.+++.|++++.+++|+++..+++.+.+.+.+| ++.+|.||+|+|... ..++...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s-~~l~~~~ 226 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS-GMFFKQL 226 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT-HHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH-HHHHHhc
Confidence 46888899999999999999999999988777777777777 899999999999874 3454443
No 101
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.37 E-value=1.5e-11 Score=103.65 Aligned_cols=80 Identities=20% Similarity=0.109 Sum_probs=59.9
Q ss_pred CCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhh
Q 022896 161 EKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 240 (290)
Q Consensus 161 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l 240 (290)
.....++.+...... ...+...+.+.+++.|++++.+++|++++.+++++.+.+.+| ++.+|.||+|+|.+. ..++
T Consensus 134 ~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~-~~l~ 209 (389)
T 2gf3_A 134 ENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN-SKLL 209 (389)
T ss_dssp TTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH-HHHG
T ss_pred CCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH-HHHh
Confidence 345666665543322 247888899999999999999999999988777777777666 799999999999875 3454
Q ss_pred cccc
Q 022896 241 KDTI 244 (290)
Q Consensus 241 ~~~~ 244 (290)
...+
T Consensus 210 ~~~g 213 (389)
T 2gf3_A 210 SKLN 213 (389)
T ss_dssp GGGT
T ss_pred hhhc
Confidence 4433
No 102
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.37 E-value=8.9e-12 Score=104.83 Aligned_cols=56 Identities=11% Similarity=-0.147 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCcee-EEcCCCcEEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++.+++|++++.+++.+. +.+.+| ++.+|.||+|+|.+.
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 36788888999999999999999999988777765 777777 799999999999874
No 103
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.36 E-value=2e-11 Score=110.23 Aligned_cols=63 Identities=6% Similarity=0.044 Sum_probs=52.6
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc-EEeccEEEEccCCCCCchhhcc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD-TINADCHFLCTGKPVGSDWLKD 242 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~-~~~~d~vv~a~G~~~~~~~l~~ 242 (290)
..+...+.+.+++.|++++.+++|+++..+++++.+.+.+|+ ++.+|.||+|+|... ..++..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s-~~l~~~ 475 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL-PEWEQT 475 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT-TCSTTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch-hccccc
Confidence 478888999999999999999999999988888888888887 899999999999874 334433
No 104
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.36 E-value=1.3e-12 Score=109.39 Aligned_cols=64 Identities=6% Similarity=-0.123 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCC--cEEeccEEEEccCCCCCchhhccc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTG--DTINADCHFLCTGKPVGSDWLKDT 243 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g--~~~~~d~vv~a~G~~~~~~~l~~~ 243 (290)
..+...+.+.+++.|++++.+++|++++.++++ +.+.+.+| .++.+|.||+|+|.+. ..++...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s-~~l~~~~ 216 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA-PGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH-HHHHHTE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch-HHHHHHh
Confidence 378888999999999999999999999887665 77888887 3899999999999884 4565554
No 105
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.36 E-value=1.4e-12 Score=102.09 Aligned_cols=97 Identities=21% Similarity=0.125 Sum_probs=75.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-----------------ccccC-------ChhHHHHHHHHHHhC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------------LLEFI-------GPKAGDKTRDWLISK 192 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~-----------------~~~~~-------~~~~~~~~~~~~~~~ 192 (290)
.+++|||+|++|+++|..|.+ .+.+|+++++... +...+ ...+...+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~ 81 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGL 81 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcC
Confidence 579999999999999999997 4889999998721 11111 125667788888887
Q ss_pred -CcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCCC
Q 022896 193 -KVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 193 -gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
|++++ ++.++++..+++. ..+.+.+|+++.+|.||+|+|..++
T Consensus 82 ~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 82 RPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp TTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred CCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 99999 5689888776665 3577788888999999999999554
No 106
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.34 E-value=4.3e-11 Score=107.98 Aligned_cols=63 Identities=6% Similarity=0.021 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKD 242 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~ 242 (290)
..+...+.+.+++.|++++.+++|+++..+++++.+.+.+|.++.+|.||+|+|... ..++..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s-~~l~~~ 479 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI-SRFSQT 479 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG-GCSTTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch-hccccc
Confidence 478888999999999999999999999988888888888888899999999999874 334433
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.31 E-value=1e-11 Score=108.32 Aligned_cols=56 Identities=9% Similarity=-0.081 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+.+.+.+.+++.|++|+++++|++|..+++++ .|++.+|+++.+|.||++++...
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 688889999999999999999999999888874 48899999999999999887653
No 108
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.29 E-value=2.5e-11 Score=104.04 Aligned_cols=57 Identities=21% Similarity=0.180 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHhCCcEEEeCc---eEeecccCCCcee-EEcCCCcEEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGE---RVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~---~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++.++ .|+++..+++.+. +.+.+|+++.+|.||+|+|.+.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3678889999999999999999 9999988777766 8888888899999999999874
No 109
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=5.3e-11 Score=102.14 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++.++.|+++..+++. +.+.+.+|+++.+|.||+|+|..+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 367788888999999999999999999876665 778888887899999999999876
No 110
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.28 E-value=8.4e-11 Score=99.63 Aligned_cols=55 Identities=16% Similarity=-0.067 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.+++|+++..+++. ..+.+.+| ++.+|.||+|+|.+.
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 67888899999999999999999999876665 56777777 799999999999874
No 111
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=6.2e-11 Score=100.09 Aligned_cols=58 Identities=7% Similarity=-0.095 Sum_probs=48.8
Q ss_pred ChhHHHHHHHHHHhCCcEEEeCceEeecccC----CCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 178 GPKAGDKTRDWLISKKVDVKLGERVNLDSVS----EGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 178 ~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~----~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
...+...+.+.+++.|++++.++.++++..+ ++.+.+.+.+| ++.+|.||+|+|..+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 3477888889999999999999999988765 45577777766 7999999999999874
No 112
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.26 E-value=7.2e-12 Score=106.84 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
..+.+.+.+.+++.|++++++++|++++.+++++ + ..+|+++.+|.||+|+|.+....++.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcC
Confidence 4788899999999999999999999999887777 5 45677899999999999875545554
No 113
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.25 E-value=1e-11 Score=108.20 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCCCc--hhhccccc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPVGS--DWLKDTIL 245 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~--~~l~~~~~ 245 (290)
..+...+.+.+++.|+++++++.|+++..+++. ..+.+.+|+++.+|.||+|+|.++.. .++...++
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi 289 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGV 289 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCC
Confidence 467788888899999999999999999887765 45788889899999999999998742 34444443
No 114
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.24 E-value=4.2e-11 Score=101.29 Aligned_cols=61 Identities=18% Similarity=0.091 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhcc
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKD 242 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~ 242 (290)
.+...+.+.+++.|++++.+++|++++.+++++.+.+.+| ++.+|.||+|+|.+. ..++..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s-~~l~~~ 214 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT-NDLLEP 214 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH-HHHHGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh-HHHhhh
Confidence 5777888888999999999999999987776777777665 799999999999874 334443
No 115
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.22 E-value=3.3e-11 Score=102.70 Aligned_cols=56 Identities=18% Similarity=0.046 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc--eeEEcCCCc--EEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~--~~v~~~~g~--~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++.|++++.++++ +.+.+.+|+ ++.+|.||.|+|..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 67777888888889999999999999877665 455667887 699999999999875
No 116
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.22 E-value=4.9e-11 Score=100.95 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHhC-CcEEEeCceEeecccCCCce--eEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD--TYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~-gi~~~~~~~v~~i~~~~~~~--~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++. |++++.++++++++.+++++ .+.+.+|+++.+|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 6778888888887 99999999999998887777 888888989999999999998764
No 117
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.21 E-value=4.5e-11 Score=101.99 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCcee-EEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
..+.+.+.+.+++.|++++++++|+++..+++++. +.+ +|+++.+|.||+|+|.+....++.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcC
Confidence 36888899999999999999999999988777654 555 477899999999999765445543
No 118
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.21 E-value=1.3e-10 Score=97.34 Aligned_cols=55 Identities=16% Similarity=0.042 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.+++|++++.+++++.+.+.+| ++.+|.||+|+|.+.
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 6788888899999999999999999988777777887777 599999999999864
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.20 E-value=4.9e-10 Score=94.14 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|++++.++.+++++. + + .+.+.+|+++.+|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccHH
Confidence 6788888889899999999999998877 3 3 788888889999999999998764
No 120
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.20 E-value=3.5e-11 Score=105.21 Aligned_cols=53 Identities=11% Similarity=-0.052 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
.+.+.+.+.+++.|++++.++.|+++..+++. +++.+|+++.||.||.++...
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 56777777788889999999999999876654 567789999999999987643
No 121
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.19 E-value=2.8e-10 Score=96.17 Aligned_cols=55 Identities=9% Similarity=-0.095 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+ .|++++.++.+++++.+++++.+.+.+|+++.+|.||.|.|..+.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3444455444 589999999999998888888898899989999999999998754
No 122
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.18 E-value=2.6e-10 Score=96.73 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.+...+.+.+++ ++++++++|++++.+++++.+.+.+|+++.+|.||.|.|.....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHH
Confidence 577777777766 89999999999998888888999999999999999999987543
No 123
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.17 E-value=1e-11 Score=108.70 Aligned_cols=46 Identities=13% Similarity=-0.088 Sum_probs=39.8
Q ss_pred HhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 190 ISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 190 ~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
+..|++++.++.|++++.+++++.+.+.+|+++.+|.||++++...
T Consensus 223 ~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 223 DLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 3347899999999999988888888888998999999999998653
No 124
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.15 E-value=1.1e-10 Score=98.68 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCcee-EEc---CCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLT---STGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~---~~g~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.+++|+++..+++.+. +.+ .++.++.+|.||.|+|..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 5677788888888999999999999987766654 554 3456899999999999875
No 125
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.13 E-value=7e-10 Score=102.33 Aligned_cols=62 Identities=21% Similarity=0.021 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEEcCCCcEEeccEEEEccCCCCCchhhcc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVGSDWLKD 242 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~~~~l~~ 242 (290)
..+...+.+.+++.|++++.+++|++++.+++.+ .+.+.+| ++.+|.||+|+|.+. ..+...
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s-~~l~~~ 213 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG-AKIGAM 213 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH-HHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch-HHHHHH
Confidence 3688889999999999999999999998766653 5677777 799999999999875 344443
No 126
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=95.44 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=37.9
Q ss_pred CCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCC
Q 022896 192 KKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 192 ~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
.|+++++++.|++++.+++++.+.+.+|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 389999999999999888888898888887899999999974
No 127
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.12 E-value=8.4e-11 Score=88.13 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=62.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcC--Ccc-ccccccccccccc--cceEEeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVE--PSF-GKRSVINHTDYLV--NGRIVASPAIN 86 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~--~~~~~~~~v~~ 86 (290)
++|++|||||++|+.+|..|++ |.+|+|+|+++........+..... ... ..+....+.+.+. +++++...++.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~~v~~ 80 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPGVVKG 80 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeCEEEE
Confidence 3799999999999999999976 9999999998732211000000000 000 0111111112111 34555557777
Q ss_pred eecc----eEEecCceEEeccEEEEccCCCC
Q 022896 87 ITEN----EVLTAEGRRVVYDYLVIATGHKD 113 (290)
Q Consensus 87 ~~~~----~v~~~~~~~~~~~~vi~a~G~~~ 113 (290)
++.+ .+.++++ ++.+|.+|+|+|..|
T Consensus 81 i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 81 VRDMGGVFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp EEECSSSEEEECSSC-EEEEEEEEECCTTCC
T ss_pred EEEcCCEEEEEECCC-EEEECEEEECCCCCC
Confidence 7653 4666677 899999999999986
No 128
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.12 E-value=9.5e-10 Score=90.72 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=39.0
Q ss_pred CcEEEeCceEeecccCCCceeEEcCCCcEEe-ccEEEEccCCCCCch
Q 022896 193 KVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVGSD 238 (290)
Q Consensus 193 gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~~~ 238 (290)
|++++++++|++++.+++++.+.+.+|+.+. +|.||+|+|......
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGG
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHH
Confidence 8999999999999988888889888887664 999999999754333
No 129
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.12 E-value=7e-11 Score=104.14 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEc--CCC-cEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT--STG-DTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~--~~g-~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.+++|+.++.+++++.+.+ .+| +++.+|.||.|.|..+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 6777888888888999999999999998888877776 678 6899999999999875
No 130
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.12 E-value=7.2e-11 Score=101.47 Aligned_cols=63 Identities=19% Similarity=0.084 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeeccc---------------CCCc-eeEEcCCCcEE--eccEEEEccCCCCCchhhc
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSV---------------SEGS-DTYLTSTGDTI--NADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~---------------~~~~-~~v~~~~g~~~--~~d~vv~a~G~~~~~~~l~ 241 (290)
.+...+.+.+++.|++++.+++|+++.. +++. ..+.+.+| ++ .+|.||+|+|.+. ..++.
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l~~ 259 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRLLN 259 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHHHG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHHHH
Confidence 7888899999999999999999999876 4444 35777777 68 9999999999874 34555
Q ss_pred ccc
Q 022896 242 DTI 244 (290)
Q Consensus 242 ~~~ 244 (290)
..+
T Consensus 260 ~~g 262 (448)
T 3axb_A 260 PLG 262 (448)
T ss_dssp GGT
T ss_pred HcC
Confidence 433
No 131
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.11 E-value=2e-10 Score=96.84 Aligned_cols=56 Identities=11% Similarity=-0.061 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeE-E-cCCC--cEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY-L-TSTG--DTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v-~-~~~g--~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++.++.+..+++.+.. . ..++ .++.+|.||.|.|..+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 56677788888899999999999888777665332 2 2233 3689999999999764
No 132
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.11 E-value=1.2e-10 Score=90.98 Aligned_cols=101 Identities=18% Similarity=0.047 Sum_probs=62.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhh----------hhhcC-Cc--ccccccccccccc---c
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASL----------RAMVE-PS--FGKRSVINHTDYL---V 75 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~----------~~~~~-~~--~~~~~~~~~~~~~---~ 75 (290)
++||+|||||++|+++|.+|++ |.+|+|||++....+.+... ...+. .. ........+.+.+ .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCC
Confidence 5899999999999999999986 99999999983211111000 00000 00 0000011111111 2
Q ss_pred cceEEeeeeeeeecc-----eEEecCceEEeccEEEEccCCCC
Q 022896 76 NGRIVASPAINITEN-----EVLTAEGRRVVYDYLVIATGHKD 113 (290)
Q Consensus 76 ~~~~~~~~v~~~~~~-----~v~~~~~~~~~~~~vi~a~G~~~ 113 (290)
++.++...++.+..+ .+.+.++.++.+|.||+|+|...
T Consensus 83 gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 83 PLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp TEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred CcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 455666777777543 35667777899999999999963
No 133
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.10 E-value=3.2e-11 Score=104.26 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=37.2
Q ss_pred cEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 194 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 194 i~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
++++.++.|++++.+++++.+.+.+|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHH
Confidence 79999999999998888888999999889999999999754
No 134
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.08 E-value=5.8e-10 Score=96.55 Aligned_cols=55 Identities=18% Similarity=0.061 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+.+.+.+.+++.|++++++++|++++.++++ +.+.+ ++.++.+|.||+|++...
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHH
Confidence 68888999999999999999999999887766 77766 455799999999998643
No 135
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.08 E-value=4.8e-10 Score=99.08 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccC-CCceeEEcC-CC--cEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSDTYLTS-TG--DTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~-~~~~~v~~~-~g--~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++.|+++..+ ++.+.+.+. +| .++.+|.||.|+|..+
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 67778888888999999999999998875 444667665 66 5799999999999875
No 136
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.07 E-value=1.2e-09 Score=95.03 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc---EEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++++++++.+++++.+.+.++. ++.+|.||.|.|..+
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 67788888888899999999999999888888888776664 799999999999875
No 137
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.07 E-value=1.6e-10 Score=101.58 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCC----ceeEEcCCC---cEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEG----SDTYLTSTG---DTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~----~~~v~~~~g---~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|+++++++++++++.+++ ++.+.+.++ .++.+|.||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 6788888999999999999999999988877 777776665 6899999999999875
No 138
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.05 E-value=2e-10 Score=100.23 Aligned_cols=57 Identities=18% Similarity=0.034 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc---eeEEcCCCc--EEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYLTSTGD--TINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|++++.+++|+++..+++. +.+...+|+ ++.+|.||.|+|....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 67778888888899999999999999887664 455566775 7999999999998753
No 139
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.05 E-value=2.6e-10 Score=100.38 Aligned_cols=141 Identities=17% Similarity=0.154 Sum_probs=79.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC-Ccccchh--------------hhhhhcC----------------
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE-YFEITWA--------------SLRAMVE---------------- 59 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~-~~~~~~~--------------~~~~~~~---------------- 59 (290)
..+||+|||||++|++||+.|++ |.+|+|||++. .++.... .+.....
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 36899999999999999999986 99999999974 2221000 0000000
Q ss_pred -----Cccc------c--cccccccccc---ccceEEeeeeeeeec--c---eEEecCceEEeccEEEEccCCCCCCCCc
Q 022896 60 -----PSFG------K--RSVINHTDYL---VNGRIVASPAINITE--N---EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (290)
Q Consensus 60 -----~~~~------~--~~~~~~~~~~---~~~~~~~~~v~~~~~--~---~v~~~~~~~~~~~~vi~a~G~~~~~p~~ 118 (290)
+... + .....+.+.+ .++.++.+.|+.+.. . .|.+.+|..+.++.||+|+|..+..+..
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 0000 0 0000011111 245677788888743 2 2566778889999999999998543321
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEe
Q 022896 119 RTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVH 168 (290)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~ 168 (290)
.+.. .+ ...+ +| +..+.+++..+.. .+.+++.+.
T Consensus 187 ~G~~--~~--------~~gr---iG-g~~a~eLA~~L~~--lG~~v~~~~ 220 (651)
T 3ces_A 187 IGLD--NY--------SGGR---AG-DPPSIPLSRRLRE--LPLRVGRLK 220 (651)
T ss_dssp CC---------------------------CCHHHHHHHT--TTCCEEEEC
T ss_pred cCcc--cC--------CCCC---cc-chhhhHHHHHHHh--cCCeEEEec
Confidence 1110 11 1222 45 5677888888875 477777664
No 140
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.05 E-value=8.4e-10 Score=94.91 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCcee-EEcC---CCc--EEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTS---TGD--TINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~~---~g~--~~~~d~vv~a~G~~~~ 236 (290)
.+.+.+.+.+++.|++++.++.|+++..+++.+. +.+. +|+ ++.+|.||.|+|..+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 5777888888889999999999999887666533 4332 665 7899999999998754
No 141
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.05 E-value=7.2e-10 Score=89.25 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=92.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------C
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------I 177 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~ 177 (290)
..+++|||+|.+|+.+|..+.+ .++.+|+++++.+.+... .
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~-~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISK-NPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-STTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHH-cCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 3589999999999999999986 238899999987654210 1
Q ss_pred ChhHHHHHHHHHHh-CCcEEEeCceEeecccCCCce-eEEcC---------CC-----cEEeccEEEEccCCCCCch---
Q 022896 178 GPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---------TG-----DTINADCHFLCTGKPVGSD--- 238 (290)
Q Consensus 178 ~~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~~-~v~~~---------~g-----~~~~~d~vv~a~G~~~~~~--- 238 (290)
...+...+.+.+.+ .|++++.++.++++..+++.+ .+... +| .++.+|.||+|+|..+...
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 12455566666765 699999999999998765542 33321 22 4799999999999876532
Q ss_pred --hhcccccccccCCCCcEEecC-------CccccCCCCeEEeccccC
Q 022896 239 --WLKDTILKDSLDTHGMLMVDE-------NLRVKGQKNIFAIGDITD 277 (290)
Q Consensus 239 --~l~~~~~~~~~~~~g~~~v~~-------~~~~~~~~~vfa~Gd~~~ 277 (290)
++...++.....+...+.++. +.++ ..|++|++|+++.
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 221112111222233333332 2333 5799999999864
No 142
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.04 E-value=1.5e-10 Score=92.94 Aligned_cols=40 Identities=25% Similarity=0.281 Sum_probs=35.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccch
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~ 51 (290)
|.+||+||||||+||+||+.|++ |++|+||||++.+|+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 35899999999999999999986 99999999999887554
No 143
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.02 E-value=1.2e-09 Score=95.04 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc---EEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++++++++.+++++.+.+.++. ++.+|.||.|.|...
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 67788888888899999999999999888888777776664 799999999999875
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.02 E-value=9.2e-10 Score=96.93 Aligned_cols=63 Identities=13% Similarity=-0.026 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcC---CC--cEEeccEEEEccCCCCCchhhcc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTS---TG--DTINADCHFLCTGKPVGSDWLKD 242 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~---~g--~~~~~d~vv~a~G~~~~~~~l~~ 242 (290)
..+...+.+.+++.|++++.+++|+++..++++ ..+.+. +| .++.++.||.|+|.+. ..+...
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s-~~l~~~ 238 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV-DTLREK 238 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH-HHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch-HHHHHh
Confidence 468888888899999999999999999887665 335443 34 3789999999999874 344443
No 145
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.01 E-value=2.6e-09 Score=90.12 Aligned_cols=58 Identities=9% Similarity=-0.104 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCC-CceeEEc-CCCc--EEeccEEEEccCCCCCc
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSDTYLT-STGD--TINADCHFLCTGKPVGS 237 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~-~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~ 237 (290)
.+...+.+.+.+.|++++.++.+++++.++ +.+.+.+ .+|+ ++.+|.||.|.|..+..
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHH
Confidence 566677777888899999999999987754 4566766 6786 79999999999987643
No 146
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.98 E-value=2.6e-09 Score=91.30 Aligned_cols=56 Identities=9% Similarity=-0.107 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeeccc-CCCc-eeEEcCCCcEEeccEEEEccCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSV-SEGS-DTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~-~~~~-~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
.++.+.+.+.+++.|++++.+++|+++.. +++. ..|.+.+|+++.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 37899999999999999999999999987 4444 66788888899999999999988
No 147
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.97 E-value=7.1e-09 Score=87.80 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEe---------ecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVN---------LDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~---------~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.+++|+ ++..+++.+.+.+.+| ++.+|.||+|+|.+.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 688888899999999999999998 8877766666666666 799999999999874
No 148
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.96 E-value=7.8e-09 Score=91.46 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCC-Cc---eeEEcCCCc--EEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GS---DTYLTSTGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~-~~---~~v~~~~g~--~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|+++++++.++++..++ +. +.+...+|+ ++.+|.||+|+|...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3677888899999999999999999998765 44 233333665 689999999999754
No 149
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.95 E-value=9.7e-09 Score=89.37 Aligned_cols=57 Identities=18% Similarity=0.057 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEc---CCCc--EEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~---~~g~--~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++.+++|+++..+++.+.+.+ .+|+ ++.+|.||.|+|.+.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 36888888999999999999999999987665555655 3565 789999999999875
No 150
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.94 E-value=1.1e-10 Score=103.96 Aligned_cols=61 Identities=13% Similarity=0.099 Sum_probs=46.0
Q ss_pred hCCcEEEeCceEeecccCCC--c-eeEEc---CCCc--EEeccEEEEccCCCCCchhhcccccccccCC
Q 022896 191 SKKVDVKLGERVNLDSVSEG--S-DTYLT---STGD--TINADCHFLCTGKPVGSDWLKDTILKDSLDT 251 (290)
Q Consensus 191 ~~gi~~~~~~~v~~i~~~~~--~-~~v~~---~~g~--~~~~d~vv~a~G~~~~~~~l~~~~~~~~~~~ 251 (290)
+.|++++.++.|+++..+++ . ..|.. .+|+ ++.+|.||+|+|..+++.+|..++++.....
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l 340 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRP 340 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSC
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccc
Confidence 34899999999999987653 2 33332 3454 6889999999999999999988887655333
No 151
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.94 E-value=2e-08 Score=88.69 Aligned_cols=58 Identities=24% Similarity=0.165 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCC-Cc-eeEE--cCCCc--EEeccEEEEccCCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GS-DTYL--TSTGD--TINADCHFLCTGKPVG 236 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~-~~-~~v~--~~~g~--~~~~d~vv~a~G~~~~ 236 (290)
..+...+.+.+++.|+++++++.++++..++ +. ..+. ..+|+ ++.+|.||+|+|....
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3577888889999999999999999998766 54 2233 34675 6899999999997653
No 152
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.93 E-value=8.2e-09 Score=90.84 Aligned_cols=56 Identities=23% Similarity=0.200 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhC-CcEEEeCceEeecccCCCc--eeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~-gi~~~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++. |++++.+ .|+++..++++ ..+.+.+|+++.+|.||.|+|..+.
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 6788888889888 9999999 99888765544 6677888888999999999998653
No 153
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.87 E-value=3.6e-08 Score=85.99 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccC-CCc-eeEEcC-CCc--EEecc-EEEEccCCCC-Cchhh
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGS-DTYLTS-TGD--TINAD-CHFLCTGKPV-GSDWL 240 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~-~~~-~~v~~~-~g~--~~~~d-~vv~a~G~~~-~~~~l 240 (290)
.+...+.+.+++.|+++++++.++++..+ ++. ..+... +++ ++.+| .||+|+|-.. +.+++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~ 270 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMI 270 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHH
Confidence 67888899999999999999999999877 343 334332 332 58896 9999999655 33443
No 154
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.87 E-value=3.4e-09 Score=93.10 Aligned_cols=34 Identities=32% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+||+|||||++|++||+.|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 35899999999999999999986 99999999974
No 155
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.87 E-value=6.4e-09 Score=88.24 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHh-CC-cEEEeCceEeecccCCCceeEEcCC---C--cEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLIS-KK-VDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~-~g-i~~~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++ .| ++++.++.+++++. ++++.+.+.+ | +++.+|.||.|.|..+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 567777777766 35 68999999999987 6667776654 6 47899999999998754
No 156
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.86 E-value=3.9e-09 Score=84.96 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCCcc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYFE 48 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~~~ 48 (290)
.++||+|||||++|+++|++|++ |.+|+|||+++..+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 45899999999999999999964 89999999998765
No 157
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.85 E-value=5.9e-08 Score=85.66 Aligned_cols=62 Identities=8% Similarity=-0.151 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEcC---CCc--EEeccEEEEccCCCCCchhhc
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTS---TGD--TINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~~---~g~--~~~~d~vv~a~G~~~~~~~l~ 241 (290)
..+...+.+.+++.|++++.+++|+++..+++. ..+... +|+ ++.+|.||+|+|.+. ..++.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws-~~l~~ 255 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV-DKVRN 255 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH-HHHHT
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH-HHHHH
Confidence 467777888889999999999999999876654 334421 343 699999999999874 34443
No 158
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.83 E-value=1.8e-07 Score=82.71 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCC-Cc-eeEEc--CCCc--EEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GS-DTYLT--STGD--TINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~-~~-~~v~~--~~g~--~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|+++++++.++++..++ +. ..+.. .+|+ ++.+|.||+|+|..+.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 677888889999999999999999987665 44 23433 3664 6899999999996653
No 159
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.82 E-value=4.1e-09 Score=92.81 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=31.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
...+||+|||||++|++||+.|++ |.+|+|+|++.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 346999999999999999999986 99999999984
No 160
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.82 E-value=2.7e-08 Score=82.52 Aligned_cols=96 Identities=11% Similarity=-0.020 Sum_probs=79.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---------------------C-----------ChhHHHH
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---------------------I-----------GPKAGDK 184 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---------------------~-----------~~~~~~~ 184 (290)
.+++|||+|..|+.+|..|.++ +.+|+++++.+.+... + ...+...
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS--GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 4799999999999999999974 8899999987653110 0 0467778
Q ss_pred HHHHHHhCCcEEEeCceEeecccCCCcee-EEcCCCcEEeccEEEEccCCCC
Q 022896 185 TRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 185 ~~~~~~~~gi~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
+.+.+++.|++++.++.|++++.+++.+. +.+.+| ++.+|.+|+|+|..+
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 88888999999999999999988887788 888887 899999999999643
No 161
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.82 E-value=8.4e-09 Score=87.15 Aligned_cols=35 Identities=37% Similarity=0.549 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+.+||+|||||++|+++|..|++ |.+|+|||+++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 35899999999999999999986 999999999864
No 162
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.80 E-value=2.8e-08 Score=81.27 Aligned_cols=99 Identities=18% Similarity=0.048 Sum_probs=78.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC--cccc--------ccC----ChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG--SRLL--------EFI----GPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~--~~~~--------~~~----~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
.+++|||+|..|+.+|..|.++ +.+|+++++. ..+. +.+ ..++...+.+.+++.|++++. +.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 92 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIV 92 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCE
T ss_pred cCEEEECccHHHHHHHHHHHHC--CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 5899999999999999999974 7899999985 1110 111 235677788888899999999 889
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.+..+++.+.+.+.+|+++.+|.+|+|+|..|..+
T Consensus 93 ~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 888888778888888888999999999999987544
No 163
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.80 E-value=6.7e-09 Score=90.19 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=78.8
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc----C-----------------------------ChhH
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----I-----------------------------GPKA 181 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----~-----------------------------~~~~ 181 (290)
...+|+|||+|++|+.+|..|.. .+.+|+++++.+.+... . ...+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL--LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHH--CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHH
Confidence 35789999999999999999997 48999999987654210 0 0355
Q ss_pred HHHHHHHHHhCCcEEEeCceEeecccC---CCceeEEc--C-CC--cEEeccEEEEccCCCCCc
Q 022896 182 GDKTRDWLISKKVDVKLGERVNLDSVS---EGSDTYLT--S-TG--DTINADCHFLCTGKPVGS 237 (290)
Q Consensus 182 ~~~~~~~~~~~gi~~~~~~~v~~i~~~---~~~~~v~~--~-~g--~~~~~d~vv~a~G~~~~~ 237 (290)
...+.+.+++.|++++.++.+++++.+ ++.+.+.+ . +| +++.+|.||+|+|..+..
T Consensus 169 ~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 667788888899999999999988764 23456655 4 56 479999999999988754
No 164
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.80 E-value=2.8e-08 Score=87.90 Aligned_cols=57 Identities=14% Similarity=-0.015 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc-e-eEEcC------CC---------cEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-D-TYLTS------TG---------DTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~-~v~~~------~g---------~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|+++++++.++++..++++ + .+.+. +| .++.+|.||.|.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 67778888888999999999999998876543 3 36554 33 57999999999998764
No 165
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.80 E-value=4.5e-09 Score=91.26 Aligned_cols=38 Identities=29% Similarity=0.481 Sum_probs=34.2
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcc
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~ 48 (290)
...+||+|||||++||++|..|++ |.+|+|||+++..+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 457999999999999999999986 99999999987654
No 166
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.78 E-value=2.5e-08 Score=87.58 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc--eeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|++++.+ .|+++..++++ ..+.+.+|+++.+|.||.|+|..+.
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 67888888898999999999 79888775544 5677788888999999999998654
No 167
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.75 E-value=5.6e-08 Score=81.61 Aligned_cols=99 Identities=19% Similarity=0.277 Sum_probs=76.7
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCCh-------------hHHHHHHHHHHhCCcEEEeCce
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGP-------------KAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
..-+++|||+|..|+.+|..|. ..+.+++++++.+.+. +..+ ++.....+++++.|++++.++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~--~~~~~itlie~~~~~~-y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~ 84 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLP-YYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEF 84 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT--TTCSCEEEECSSSSCC-BCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh--CCCCEEEEEECCCCCC-cccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCE
Confidence 4568999999999999999994 4688999999876532 1111 1222345667889999999999
Q ss_pred EeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 202 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
|+.++.+.. .+.+.+|+++.+|.+|+|||..|..+
T Consensus 85 V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 85 ATSIDPNNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EEEEETTTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEEEECCCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 988876554 56778888999999999999887644
No 168
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.75 E-value=6.4e-08 Score=79.68 Aligned_cols=96 Identities=19% Similarity=0.134 Sum_probs=77.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------------cC----ChhHHHHHHHHHHhCCcEEE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------FI----GPKAGDKTRDWLISKKVDVK 197 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------~~----~~~~~~~~~~~~~~~gi~~~ 197 (290)
.+++|||+|+.|+.+|..|.. .+.+|+++++.+.+.. .+ ..++...+.+.+++.+++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 579999999999999999986 4789999998764311 00 13556667777888899999
Q ss_pred eCceEeecccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 198 LGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 198 ~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
.++.|+.++.+++.+.+.+.+|+++.+|.+|+|+|..
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred eCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 9999998887666677888888889999999999984
No 169
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.74 E-value=3.5e-08 Score=81.02 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=77.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---------------C----ChhHHHHHHHHHHhCCcEEE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---------------I----GPKAGDKTRDWLISKKVDVK 197 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---------------~----~~~~~~~~~~~~~~~gi~~~ 197 (290)
.+++|||+|..|+.+|..|.. .+.+|+++++.+.+... + ..++...+.+.+++.|++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 589999999999999999987 48899999987643210 1 23567778888888899999
Q ss_pred eCceEeecccCCC-ceeEEcCCCcEEeccEEEEccCC
Q 022896 198 LGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 198 ~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
.++.|+.++.+++ .+.+.+.+|+ +.+|.+|+|+|.
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred ccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 9999999987766 5778888875 999999999999
No 170
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.73 E-value=1e-07 Score=84.30 Aligned_cols=57 Identities=12% Similarity=-0.022 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccC-CCc-eeEE---cCCCc--EEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVS-EGS-DTYL---TSTGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~-~~~-~~v~---~~~g~--~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++.++.++++..+ ++. ..+. ..+|+ .+.++.||+|+|-..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 367778888888899999999999999875 443 3333 25665 689999999999753
No 171
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.72 E-value=6.5e-08 Score=85.11 Aligned_cols=54 Identities=9% Similarity=0.099 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC---C--cEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++. +++++++++++.+++++.+++.+ | +++.+|.||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 4666777777766 88999999998888877776544 6 47999999999998753
No 172
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.72 E-value=1.9e-07 Score=77.74 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=79.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------------cC----ChhHHHHHHHHHHhCCcEE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------FI----GPKAGDKTRDWLISKKVDV 196 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------~~----~~~~~~~~~~~~~~~gi~~ 196 (290)
..+++|||+|+.|+.+|..|.. .+.+|+++++.+.+.. .+ ...+...+.+.+++.++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 4689999999999999999986 4889999998764311 01 1356677788888889999
Q ss_pred EeCceEeecccCCC-ceeEEcCCCcEEeccEEEEccCCCC
Q 022896 197 KLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 197 ~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
+.++.|+.++.+++ .+.+.+.+|+++.+|.+|+|+|..+
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred EcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 99999998887655 5778888888899999999999843
No 173
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.71 E-value=7.4e-08 Score=84.10 Aligned_cols=56 Identities=18% Similarity=0.144 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc--eeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++.|++++.+ .|++++.++++ ..+.+.+|+++.+|.||.|+|.+..
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 67788888888999999999 89888875554 6677888888999999999998753
No 174
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.70 E-value=3.3e-08 Score=83.54 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=73.3
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc----------CChhHHHHHHHHHHhCCcEEEeCceEee
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----------IGPKAGDKTRDWLISKKVDVKLGERVNL 204 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~gi~~~~~~~v~~ 204 (290)
.+|||+|||+|+.|+.+|..|.....+.+|+++++.+.+... ...+....-.+.+.++|++++.+ .++.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~ 79 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALG 79 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEE
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEE
Confidence 379999999999999999999876667899999987653211 01111111124456789999876 5655
Q ss_pred cccCCCceeEEcCCCcEEeccEEEEccCCCCCchhh
Q 022896 205 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 240 (290)
Q Consensus 205 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l 240 (290)
++.+ ...+.+.+|.++.||.+|+|+|.+++.+-+
T Consensus 80 id~~--~~~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 80 IDPD--KKLVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp EETT--TTEEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred EEcc--CcEEEecccceeecceeeeccCCccccCCc
Confidence 5543 445677889999999999999998765433
No 175
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.69 E-value=8.9e-08 Score=77.28 Aligned_cols=99 Identities=20% Similarity=0.151 Sum_probs=77.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc------cC-------ChhHHHHHHHHHHhC-CcEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE------FI-------GPKAGDKTRDWLISK-KVDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~-gi~~~~~~~v 202 (290)
.+++|||+|+.|+.+|..|... +.+|+++++.+.... .+ ..++...+.+.+++. +++++.+ .+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CE
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EE
Confidence 4799999999999999999874 789999997542210 01 125666777777776 7888765 88
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+++.+.+.+.+|+++.+|.+|+|+|..|..+
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 888877777888888998999999999999987543
No 176
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.67 E-value=3.5e-08 Score=87.55 Aligned_cols=56 Identities=14% Similarity=0.016 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHhCC-cEEEeCceEeecccCCCc-eeE--E-cCCCc--EEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKK-VDVKLGERVNLDSVSEGS-DTY--L-TSTGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~g-i~~~~~~~v~~i~~~~~~-~~v--~-~~~g~--~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.| ++++.++.++++..+++. ..+ . ..+|+ .+.++.||+|+|...
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 56777888888888 999999999998876553 222 2 36776 689999999999743
No 177
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.67 E-value=3.6e-08 Score=84.08 Aligned_cols=94 Identities=19% Similarity=0.291 Sum_probs=71.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhH-------------HHHHHHHHHhCCcEEEeCceEe
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKA-------------GDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
|+|+|||+|..|+.+|..|.+..++.+|+++++.+.+. +.+.+ ...+.+.+++.|++++.+ +++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~--~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~ 79 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG--FTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAE 79 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE--CGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc--cCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEE
Confidence 68999999999999999998876678999999887642 11111 112345566779999876 576
Q ss_pred ecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 204 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.++.+. .+|.+++|++++||.+|+|+|.++
T Consensus 80 ~Id~~~--~~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 80 SIDPDA--NTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp EEETTT--TEEEETTCCEEECSEEEECCCCEE
T ss_pred EEECCC--CEEEECCCCEEECCEEEEeCCCCc
Confidence 666544 457788999999999999999864
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.67 E-value=9e-08 Score=78.76 Aligned_cols=101 Identities=19% Similarity=0.149 Sum_probs=80.3
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc----ccc------------ccC-----ChhHHHHHHHHHHhCC
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS----RLL------------EFI-----GPKAGDKTRDWLISKK 193 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~----~~~------------~~~-----~~~~~~~~~~~~~~~g 193 (290)
..++++|||+|..|+.+|..|..+ +.+|+++++.+ .+. +.+ ..++...+.+.+++.|
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA--EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999974 88999999843 111 011 2367778888899999
Q ss_pred cEEEeCceEeecccCCCceeEEc---CCCcEEeccEEEEccCCCCCch
Q 022896 194 VDVKLGERVNLDSVSEGSDTYLT---STGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 194 i~~~~~~~v~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
++++.++ ++.++.+++.+.+.+ .++.++.+|.+|+|+|.+|..+
T Consensus 99 v~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 99 TEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp CEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred CEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9999998 888888777777766 3667899999999999977543
No 179
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.66 E-value=3.6e-08 Score=83.47 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCc
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (290)
++|+||||||+||++|..|++ |++|+||||.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 689999999999999999986 9999999997643
No 180
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.64 E-value=5.7e-08 Score=83.09 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=76.5
Q ss_pred CCeEEEEcCchhHHHHHHHHhh-hCCCCeEEEEecCcccccc----------C-ChhHHHHHHHHHHhCCcEEEeCceEe
Q 022896 136 ARSILIVGGGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLEF----------I-GPKAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~-~~~~~~v~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
.++++|||+|..|+.+|..|.. ...+.+|+++++.+.+.-. . ..++...+.+.+++.|++++. ..++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~ 82 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAE 82 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEE
Confidence 4789999999999999999986 2247899999988764210 0 112223356777889999985 5787
Q ss_pred ecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 204 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
.++.+.+ .+.+.+|+++.+|.+|+|+|.+|+.+.++
T Consensus 83 ~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 83 QIDAEAQ--NITLADGNTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp EEETTTT--EEEETTSCEEECSEEEECCCCEECGGGST
T ss_pred EEEcCCC--EEEECCCCEEECCEEEECCCCCcCcccCC
Confidence 7765544 56777888899999999999988655443
No 181
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.61 E-value=2.5e-08 Score=85.64 Aligned_cols=55 Identities=9% Similarity=-0.198 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccC--CCce-eEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVS--EGSD-TYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~--~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+.+.+.+.+++.|++++++++|+++..+ ++.+ .+.+ +|+++.+|.||+|+|.++
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP 300 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc
Confidence 78889999999999999999999999876 5553 4555 577899999999999875
No 182
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.60 E-value=2.7e-07 Score=75.01 Aligned_cols=98 Identities=22% Similarity=0.229 Sum_probs=75.6
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc--cc---------cc---CChhHHHHHHHHHHhCCcEEEeCceEe
Q 022896 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR--LL---------EF---IGPKAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 138 ~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~--~~---------~~---~~~~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
+++|||+|+.|+.+|..+.. .+.+++++++... .. .. ..+.+...+.+.+++.|++++.++.++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 80 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSAR--KGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSAS 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEE
Confidence 68999999999999999986 4788998865310 00 00 113567778888888999999999998
Q ss_pred ecccCC---CceeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 204 LDSVSE---GSDTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 204 ~i~~~~---~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.+..+. +...+.+.+|+++.+|.+|+|+|.+|..
T Consensus 81 ~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 81 KLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 886543 2577788888889999999999987654
No 183
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.60 E-value=3.2e-07 Score=74.63 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=76.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCcc---c--------cccC----C-hhHHHHHHHHHHhCCcEEEeC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSR---L--------LEFI----G-PKAGDKTRDWLISKKVDVKLG 199 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~---~--------~~~~----~-~~~~~~~~~~~~~~gi~~~~~ 199 (290)
.+++|||+|+.|+.+|..+.+. +. +|+++++... . .+.+ . ..+...+.+.+++.|++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~- 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG--GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM- 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-
T ss_pred ceEEEECccHHHHHHHHHHHHC--CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-
Confidence 3689999999999999999873 77 9999997521 0 0111 1 35667777888889999998
Q ss_pred ceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 200 ERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 200 ~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.++.+++.+.+.+.+|+++.+|.+|+|+|.+|..+
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 788888776666777777888999999999999876543
No 184
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.60 E-value=1.4e-07 Score=80.99 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=77.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---cC----Ch------hHHHHHHHHHHhCCcEEEeCceEe
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---FI----GP------KAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---~~----~~------~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
++++|||+|..|+.+|..|.++.++.+|+++++.+.+.. .. .. .+.....+.+++.|++++.++.++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 589999999999999999998666899999998876431 00 00 111114566788999999999999
Q ss_pred ecccCCCceeEE-cCCCcEEeccEEEEccCCCCCch
Q 022896 204 LDSVSEGSDTYL-TSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 204 ~i~~~~~~~~v~-~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.++.+.+.+.+. ..+++++.+|.+|+|+|.+|..+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 888877766664 33556899999999999988654
No 185
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.59 E-value=5.5e-07 Score=77.52 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=73.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC-CCCe---EEEEecCcccccc------------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDF-PEKK---VTLVHKGSRLLEF------------------------------------ 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~-~~~~---v~~~~~~~~~~~~------------------------------------ 176 (290)
++++|||+|++|+.+|..|.... .+.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 58999999999999999998611 3667 9999987543110
Q ss_pred -C---------------ChhHHHHHHHHHHhCCcE--EEeCceEeecccCCC--ceeEEcCC---C--cEEeccEEEEcc
Q 022896 177 -I---------------GPKAGDKTRDWLISKKVD--VKLGERVNLDSVSEG--SDTYLTST---G--DTINADCHFLCT 231 (290)
Q Consensus 177 -~---------------~~~~~~~~~~~~~~~gi~--~~~~~~v~~i~~~~~--~~~v~~~~---g--~~~~~d~vv~a~ 231 (290)
+ ...+...+.+.+++.|++ ++.++.|+.++.+++ .+.+.+.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 023455667777778998 999999998876655 45565543 4 478999999999
Q ss_pred C--CCCCch
Q 022896 232 G--KPVGSD 238 (290)
Q Consensus 232 G--~~~~~~ 238 (290)
| ..|+.+
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 555543
No 186
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.58 E-value=3.4e-08 Score=82.10 Aligned_cols=44 Identities=25% Similarity=0.486 Sum_probs=38.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCC-CCcccchhhh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPK-EYFEITWASL 54 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~-~~~~~~~~~~ 54 (290)
...+||+|||||++||++|++|++ |++|+|+|++ +.+|+.+...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 446899999999999999999976 9999999999 8888765543
No 187
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.58 E-value=3.5e-08 Score=85.96 Aligned_cols=42 Identities=31% Similarity=0.399 Sum_probs=36.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
...+||+|||||++||++|++|++ |++|+|+|+++.+|+.+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 346899999999999999999986 999999999998886543
No 188
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.58 E-value=3.3e-07 Score=75.32 Aligned_cols=98 Identities=22% Similarity=0.094 Sum_probs=76.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEec----Cccccc------------cC-----ChhHHHHHHHHHHhCCcE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHK----GSRLLE------------FI-----GPKAGDKTRDWLISKKVD 195 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~----~~~~~~------------~~-----~~~~~~~~~~~~~~~gi~ 195 (290)
.+++|||+|+.|+.+|..|.. .+.+|+++++ ...... .+ ...+...+.+.+++.|++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 579999999999999999987 3789999987 222110 11 135667778888899999
Q ss_pred EEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 196 VKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 196 ~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
++.++ ++.++.+++.+.+.+ +|+++.+|.+|+|+|.+|..+
T Consensus 87 ~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 87 IFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp EECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 99987 877877777777877 777899999999999886543
No 189
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.57 E-value=5.2e-07 Score=76.44 Aligned_cols=99 Identities=22% Similarity=0.354 Sum_probs=74.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHH-------------HHHHHHHhCCcEEEeCceEe
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGD-------------KTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~gi~~~~~~~v~ 203 (290)
++++|||+|..|+.+|..|.++....+|+++++.+... +..+.+.. ...+.+++.|++++.++.++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-YDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-BCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-cCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 58999999999999999999864445699999876532 11111111 22355678899999999998
Q ss_pred ecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 204 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.++.+. ..+.+.+|+++.+|.+|+|||..|..+
T Consensus 82 ~id~~~--~~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 82 ALDVQT--RTISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EEETTT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECCC--CEEEECCCCEEECCEEEEccCCcccCC
Confidence 776554 356777888999999999999887543
No 190
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.57 E-value=3.6e-07 Score=76.21 Aligned_cols=96 Identities=21% Similarity=0.177 Sum_probs=75.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCccccc---------------------c------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSRLLE---------------------F------------------ 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~~~~---------------------~------------------ 176 (290)
.+++|||+|..|+.+|..|... +. +|+++++.+ +.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~--g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF--GITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred CcEEEECcCHHHHHHHHHHHHc--CCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999873 66 899999875 100 0
Q ss_pred ---CC-hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 177 ---IG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 177 ---~~-~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.. ..+...+.+.+++.|++++.++.|++++.+++.+.+.+.++ ++.+|.||+|+|..+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 00 23445566777889999999999988887766777877776 6999999999998764
No 191
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.56 E-value=1.3e-07 Score=80.17 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=74.8
Q ss_pred CeEEEEcCchhHHHHHHHHhh-hCCCCeEEEEecCcccccc-----------CChhHHHHHHHHHHhCCcEEEeCceEee
Q 022896 137 RSILIVGGGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTRDWLISKKVDVKLGERVNL 204 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~-~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~gi~~~~~~~v~~ 204 (290)
++++|||+|..|+.+|..|.+ ...+.+|+++++.+.+... ...++...+.+.+++.|++++.+ .++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 589999999999999999987 3358899999988754211 11234445677777889999988 8877
Q ss_pred cccCCCceeEEcCCC--cEEeccEEEEccCCCCCchhh
Q 022896 205 DSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWL 240 (290)
Q Consensus 205 i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~l 240 (290)
++.++..+.+...++ .++.+|.+|+|+|..|+.+.+
T Consensus 81 i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~i 118 (409)
T 3h8l_A 81 IDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELV 118 (409)
T ss_dssp EETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGS
T ss_pred EeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCC
Confidence 776655444443222 248999999999998765433
No 192
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.56 E-value=2.4e-07 Score=81.26 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=79.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------------------------------------CC
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------------------------------------IG 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-------------------------------------~~ 178 (290)
..+++|||+|.+|+.+|..|.+ .+.+++++++.+.+... ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 3589999999999999999987 57899999986543210 01
Q ss_pred hhHHHHHHHHHHhCCc--EEEeCceEeecccCCC--ceeEEcCCCcEEeccEEEEccC--CCCCch
Q 022896 179 PKAGDKTRDWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTG--KPVGSD 238 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi--~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G--~~~~~~ 238 (290)
+++...+.+.+++.|+ +++.++.|++++.+++ .+.+.+.+|+++.+|.||+|+| ..|..+
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 2556677778888898 8999999999987665 4788888998999999999999 455433
No 193
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.55 E-value=4e-07 Score=79.74 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=77.0
Q ss_pred CeEEEEcCchhHHHHHHHHh-hhCCCCeEEEEecCcccccc---------------------C----------------C
Q 022896 137 RSILIVGGGPTGVELAGEIA-VDFPEKKVTLVHKGSRLLEF---------------------I----------------G 178 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~-~~~~~~~v~~~~~~~~~~~~---------------------~----------------~ 178 (290)
.+++|||+|.+|+.+|..|. + .+.+++++++.+.+... + .
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~--~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHE--LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCEEEECcCHHHHHHHHHHHHc--CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 57999999999999999998 5 57899999986543210 0 1
Q ss_pred hhHHHHHHHHHHhCCc--EEEeCceEeecccCCC--ceeEEcCCCcEEeccEEEEccCC
Q 022896 179 PKAGDKTRDWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi--~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
+++...+.+.+++.|+ .++.++.|++++.+++ .+.+.+.+|+++.+|.||+|+|.
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 2456677788888898 8999999999987665 57888889989999999999995
No 194
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.54 E-value=5.3e-08 Score=82.94 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 181 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 181 ~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
+........+..+.+++.+++|++++.+++++.+.+.+|+ +.+|.||+|++..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 3444444445556688999999999888778888888875 9999999999864
No 195
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.54 E-value=5.8e-08 Score=81.33 Aligned_cols=44 Identities=23% Similarity=0.315 Sum_probs=38.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASL 54 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~ 54 (290)
...+|++|||||++||++|++|++ |.+|+|+|+++.+|+.+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 346899999999999999999976 99999999999988776543
No 196
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.54 E-value=7e-07 Score=73.11 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=75.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------------ccC-----ChhHHHHHHHHHHhCCcEEEeC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------------EFI-----GPKAGDKTRDWLISKKVDVKLG 199 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~------------~~~-----~~~~~~~~~~~~~~~gi~~~~~ 199 (290)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.. +. +.+ ...+...+.+.+++.|++++.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~- 84 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM- 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-
Confidence 579999999999999999987 378999999872 20 111 125667778888899999987
Q ss_pred ceEeecccC--CCc-eeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 200 ERVNLDSVS--EGS-DTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 200 ~~v~~i~~~--~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
..++.+..+ ++. +.+.+.+|+++.+|.+|+|+|.+|..+
T Consensus 85 ~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 85 DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 578777665 333 667677888999999999999876543
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.54 E-value=4.4e-07 Score=77.40 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=74.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---CC----------hhHHHHHHHHHHhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---IG----------PKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
..+++|||+|..|+.+|..|.......+|+++++.+.+.-. +. ..+.....+.+++.|++++.++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 46899999999999999999875333489999976543110 00 011112245677899999999999
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhh
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 240 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l 240 (290)
+.++.++. .+.+.+|+++.+|.+|+|+|..|..+.+
T Consensus 84 ~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 84 TAINRDRQ--QVILSDGRALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp EEEETTTT--EEEETTSCEEECSEEEECCCEEECCCGG
T ss_pred EEEECCCC--EEEECCCCEEECCEEEEcCCCCccCCCC
Confidence 88876543 5666788899999999999998765443
No 198
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.53 E-value=3.9e-07 Score=78.12 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=74.7
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCC--eEEEEecCcccccc--C---------------------------------
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEK--KVTLVHKGSRLLEF--I--------------------------------- 177 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~--~v~~~~~~~~~~~~--~--------------------------------- 177 (290)
...+|+|||+|++|+.+|..|... +. +|+++++.+.+... .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~--G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE--KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 357899999999999999999864 66 99999986532100 0
Q ss_pred -------------------------------ChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC---Cc---
Q 022896 178 -------------------------------GPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST---GD--- 220 (290)
Q Consensus 178 -------------------------------~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~---g~--- 220 (290)
...+.+.+.+.+++.+..++.++.|+.++.+++.+.+++.+ |+
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 01334555566666678899999999998776666676654 66
Q ss_pred EEeccEEEEccCC--CCCc
Q 022896 221 TINADCHFLCTGK--PVGS 237 (290)
Q Consensus 221 ~~~~d~vv~a~G~--~~~~ 237 (290)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 4443
No 199
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.51 E-value=8.6e-08 Score=80.92 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=38.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhc-c-CCcEEEEcCCCCcccchhhh
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASL 54 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~-~-g~~v~vie~~~~~~~~~~~~ 54 (290)
.++||+|||||++||++|++|+ + |++|+|+|+++.+|+.+...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 3689999999999999999996 4 89999999999998876543
No 200
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.50 E-value=4.4e-08 Score=85.64 Aligned_cols=41 Identities=24% Similarity=0.477 Sum_probs=36.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCCCcccchhh
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~~~~~~~~~ 53 (290)
.+||+|||||++||+||++|++ | .+|+|+|+++.+|+....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 4899999999999999999976 8 999999999999876543
No 201
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.50 E-value=6.8e-08 Score=80.50 Aligned_cols=36 Identities=33% Similarity=0.351 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.+++||+|||||++|+++|++|++ |.+|+|||++..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 446899999999999999999975 999999999864
No 202
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.49 E-value=6.9e-07 Score=78.33 Aligned_cols=100 Identities=17% Similarity=0.107 Sum_probs=76.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-----------------------------------c--CC
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------------------------------F--IG 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-----------------------------------~--~~ 178 (290)
..+++|||+|.+|+.+|..|.+ .+.+++++++.+.+.. . ..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 3579999999999999999986 5789999998754310 0 12
Q ss_pred hhHHHHHHHHHHhCCc--EEEeCceEeecccCCC--ceeEEcCCCcEEeccEEEEccC--CCCCc
Q 022896 179 PKAGDKTRDWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTG--KPVGS 237 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi--~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G--~~~~~ 237 (290)
+++...+.+.+++.|+ .++.++.|++++.+++ .+.+.+.+|+++.||.||+|+| ..|..
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 3566677777788887 7899999998877654 4688888998999999999999 45443
No 203
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.49 E-value=1.1e-07 Score=81.22 Aligned_cols=99 Identities=17% Similarity=0.186 Sum_probs=73.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------CChhHHHHHHHHHHhCCcEEEeCceEeec
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTRDWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~gi~~~~~~~v~~i 205 (290)
++++|||+|..|+.+|..|.....+.+|+++++.+.+... ...++...+.+.+++.|++++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 6899999999999999999874458899999998765311 01112222445566789999965 77767
Q ss_pred ccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 206 SVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 206 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.+.. .+.+.+|+++.+|.+|+|+|.+++.+
T Consensus 82 d~~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECCCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 65443 56777888899999999999987544
No 204
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.48 E-value=5.3e-08 Score=83.66 Aligned_cols=40 Identities=20% Similarity=0.323 Sum_probs=36.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
++||+|||||++||+||++|++ |++|+|+|+++.+|+...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 5899999999999999999976 999999999998886654
No 205
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.48 E-value=9.5e-08 Score=82.93 Aligned_cols=42 Identities=31% Similarity=0.277 Sum_probs=37.2
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
...+||+|||||++||+||++|++ |++|+|+|+++..|+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCcee
Confidence 346899999999999999999976 999999999998887643
No 206
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.47 E-value=5.9e-07 Score=77.05 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=72.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---C---------ChhHHHHHHHHH-HhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---I---------GPKAGDKTRDWL-ISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---~---------~~~~~~~~~~~~-~~~gi~~~~~~~v 202 (290)
.++++|||+|..|+.+|..|....++.+|+++++.+.+... + ..++.....+.+ ++.|++++.++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999986568899999988753210 0 011222222334 6789999999999
Q ss_pred eecccCCCceeEEcCCC-cEEeccEEEEccCCCCCchh
Q 022896 203 NLDSVSEGSDTYLTSTG-DTINADCHFLCTGKPVGSDW 239 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g-~~~~~d~vv~a~G~~~~~~~ 239 (290)
+.++. +...+.+.++ .++.+|.+|+|||..|..+-
T Consensus 83 ~~i~~--~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 83 IEVDT--GYVRVRENGGEKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEECS--SEEEEECSSSEEEEECSEEEECCCEEECCCS
T ss_pred EEEec--CCCEEEECCceEEEEcCEEEECCCCCCCCCC
Confidence 76654 3456677777 38999999999998776443
No 207
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.46 E-value=9.6e-07 Score=71.85 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=75.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc----c------------ccC-----ChhHHHHHHHHHHhCCcE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL----L------------EFI-----GPKAGDKTRDWLISKKVD 195 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~----~------------~~~-----~~~~~~~~~~~~~~~gi~ 195 (290)
..++|||+|+.|+.+|..++. .+.+|+++++...- . +.+ .+++...+.+.+++.+++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 579999999999999999986 48899999875420 0 011 135667778888899999
Q ss_pred EEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 196 VKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 196 ~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
+.... +.....+.+...+.+.++.++.+|.+|+|||..|..+.++
T Consensus 83 ~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ip 127 (314)
T 4a5l_A 83 IITET-IDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVP 127 (314)
T ss_dssp EECCC-EEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCT
T ss_pred EEEeE-EEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCC
Confidence 87654 4445555666677778888999999999999887654443
No 208
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.46 E-value=6.9e-07 Score=79.34 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=79.6
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc-----------ccC-C--hhHHHHHHHHHHhCCcEEEeCc
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-----------EFI-G--PKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~-----------~~~-~--~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
..++++|||+|..|+.+|..|..+.++.+|+++++.+.+. ... . ..+...+....++.|++++.++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 4579999999999999999999866689999999887632 000 1 1123345566678899999999
Q ss_pred eEeecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 201 RVNLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 201 ~v~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
.++.++.+++.+.+.. .+|+ .+.+|.+|+|||..|..+
T Consensus 115 ~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999988777766653 4565 789999999999877544
No 209
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.46 E-value=6.5e-08 Score=82.51 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+++||+||||||+|+++|+.|++ |++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 56899999999999999999986 99999999987
No 210
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.45 E-value=1.2e-06 Score=71.11 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=70.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------cc------C-ChhHHHHHHHHHHhCC-cEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------EF------I-GPKAGDKTRDWLISKK-VDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~------~~------~-~~~~~~~~~~~~~~~g-i~~~~~~~v 202 (290)
-.|+|||+|+.|+.+|..++. .+.+|+++++...-. +. . .+++.....+.+.+.+ +.++....+
T Consensus 7 yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred cCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 469999999999999988875 588999998753210 00 1 1244455555555554 556555544
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.....+.+...+.+.+|+++.+|.+|+|||.+|..+
T Consensus 85 ~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred EeeecCCCcEEEEECCCCEEEeCEEEEccCCccccc
Confidence 434445556788889999999999999999987544
No 211
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.45 E-value=1.1e-07 Score=82.17 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEc---CCCcEEeccEEEEccCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGDTINADCHFLCTGKP 234 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~ 234 (290)
.+.+.+.+.+ |.+++.+++|++++.+++++.+.+ .+|+++.+|.||+|++..
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 4555555554 679999999999988877788877 677789999999999864
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.45 E-value=1e-07 Score=81.47 Aligned_cols=101 Identities=17% Similarity=0.101 Sum_probs=72.1
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------CC-h--hHHHHHHHHHHhCCcEEEeCceEe
Q 022896 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IG-P--KAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 138 ~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~-~--~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
||+|||+|+.|+.+|..+++.....+|+++++.+...-. .. . .+.....+.+++.|++++.+++++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 699999999999999999876556789999987643110 00 0 011112345677899999999998
Q ss_pred ecccCCCceeEEcC---CCcEEeccEEEEccCCCCCch
Q 022896 204 LDSVSEGSDTYLTS---TGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 204 ~i~~~~~~~~v~~~---~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.+..+.....+... ++.++.+|.+|+|||.+|+.+
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 88776666555432 234688999999999987653
No 213
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.44 E-value=1.6e-07 Score=78.34 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=36.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhh
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~ 53 (290)
++|++|||||++|+++|++|++ |++|+|+|+++.+|+....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 3799999999999999999987 9999999999988876543
No 214
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.44 E-value=9.4e-07 Score=72.12 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=74.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-----------cccC-----ChhHHHHHHHHHHhCCcEEEeCc
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-----------LEFI-----GPKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~-----------~~~~-----~~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
.+++|||+|+.|+.+|..|.+ .+.+++++++...- .+.+ .+.+...+.+.+++.|++++.++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 579999999999999999986 47889999853210 0111 23566677788889999999886
Q ss_pred eEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 201 RVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
++.++.+++.+.+ +.++.++.+|.+|+|+|.+|..+
T Consensus 84 -v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 84 -INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp -EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECCC
T ss_pred -eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 8777776666666 56777899999999999876543
No 215
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=3.4e-07 Score=76.33 Aligned_cols=98 Identities=22% Similarity=0.354 Sum_probs=71.1
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------CC-hhHHHHHHHHHHhCCcEEEeCceE
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IG-PKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
.+.+++|||+|+.|+.+|..+.+. + +|+++++.+..... .+ ..+.....+.+++.|++++.++.+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~--g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQT--Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhc--C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEE
Confidence 578999999999999999999863 5 99999987643210 01 112222345677889999999988
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+. ..+. .+|+++.+|.+|+|||.+|..+
T Consensus 84 ~~id~~~--~~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 84 KLIDRGR--KVVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EEEETTT--TEEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEEECCC--CEEE-ECCcEEECCEEEECCCCCCCCC
Confidence 7776543 3455 5778899999999999987654
No 216
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.44 E-value=8.6e-07 Score=76.54 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=67.5
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------cc-C------ChhH------HHHHHHHH-HhCCcE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------EF-I------GPKA------GDKTRDWL-ISKKVD 195 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~------~~-~------~~~~------~~~~~~~~-~~~gi~ 195 (290)
.++++|||+|..|+.+|..|.++.++.+|+++++.+.+. +. . ...+ .....+.+ +..|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 368999999999999999999866689999999887641 10 0 0111 11122333 357999
Q ss_pred EEeCceEeecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 196 VKLGERVNLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 196 ~~~~~~v~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
++.++.++.++.+.+.+.+.. .+|+ .+.+|.+|+|+|..|..+
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999998888777666653 3455 789999999999877543
No 217
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.43 E-value=4.5e-07 Score=80.13 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=75.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------CC--hh-HHHHHHHHHHhCCcEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IG--PK-AGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~--~~-~~~~~~~~~~~~gi~~~~~~~v 202 (290)
++++|||+|+.|+.+|..|..+.++.+|+++++.+.+.-. .. .. +........++.|++++.++.|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999986668899999988764210 00 01 1112333344579999999999
Q ss_pred eecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+.+.+.+.. .+|+ ++.+|.+|+|||..|..+
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99988777666653 3344 789999999999977554
No 218
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.43 E-value=1.1e-06 Score=71.74 Aligned_cols=98 Identities=19% Similarity=0.110 Sum_probs=74.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-----------cccC----ChhHHHHHHHHHHhCCcEEEeCc
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-----------LEFI----GPKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
..+++|||+|+.|+.+|..+.+ .+.+|+++++...- .+.+ ...+...+.+.+++.|++++. .
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-V 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-C
T ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-e
Confidence 4689999999999999999987 37899999974210 0111 135566777888889999988 6
Q ss_pred eEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 201 RVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.++.++.+++.+.+.+ ++.++.+|.+|+|+|..|..
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 7887876666566665 56689999999999987654
No 219
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.43 E-value=5.6e-07 Score=76.08 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=73.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---C----------ChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---I----------GPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
.++++|||+|..|+.+|..|.++....+|+++++.+...-. + ...+.....+.+.+.+++++. +.+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 36899999999999999999985344489999987632110 0 112223345677889999999 888
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+.. .+.+.+|+++.+|.+|+|||..|..+
T Consensus 80 ~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 80 VSIDREGR--KLLLASGTAIEYGHLVLATGARNRML 113 (404)
T ss_dssp EEEETTTT--EEEESSSCEEECSEEEECCCEEECCC
T ss_pred EEEECCCC--EEEECCCCEEECCEEEEeeCCCccCC
Confidence 77766543 56677888999999999999876543
No 220
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.42 E-value=5.9e-07 Score=76.25 Aligned_cols=101 Identities=19% Similarity=0.161 Sum_probs=75.5
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-------cC------ChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-------FI------GPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-------~~------~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
..+++|||+|..|+.+|..|.++....+|+++++.+.+.- .+ ...+.....+.+++.|++++.++.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 4689999999999999999998544446999998764311 00 1122233456778899999999999
Q ss_pred eecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+. ..+.+.+|+.+.+|.+|+|||..|..+
T Consensus 89 ~~id~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDPAA--HTVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEETTT--TEEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEECCC--CEEEECCCCEEEeeEEEEccCCccCCC
Confidence 8776544 456677888999999999999887654
No 221
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.41 E-value=1.8e-06 Score=71.05 Aligned_cols=99 Identities=22% Similarity=0.271 Sum_probs=75.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-----------cccC-----ChhHHHHHHHHHHhCCcEEEeC
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-----------LEFI-----GPKAGDKTRDWLISKKVDVKLG 199 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~-----------~~~~-----~~~~~~~~~~~~~~~gi~~~~~ 199 (290)
..+++|||+|+.|+.+|..|.. .+.+++++++...- .+.+ .+++...+.+.+++.|++++.+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 4689999999999999999987 37889998853110 0111 1356677778888899999998
Q ss_pred ceEeecccCCCceeE-EcCCCcEEeccEEEEccCCCCCch
Q 022896 200 ERVNLDSVSEGSDTY-LTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 200 ~~v~~i~~~~~~~~v-~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+ ++.++. .+.+.+ .+.+|+++.+|.+|+|+|..|..+
T Consensus 92 ~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 92 D-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp C-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred e-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 7 777766 455667 777888999999999999876543
No 222
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.41 E-value=1e-06 Score=75.54 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=75.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-----------cC-C-hhHHHHHHHHHHhCCcEEEeCceEe
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------FI-G-PKAGDKTRDWLISKKVDVKLGERVN 203 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-----------~~-~-~~~~~~~~~~~~~~gi~~~~~~~v~ 203 (290)
.+++|||+|..|+.+|..+.+..++.+|+++++.+.+.. .. . .++.....+.+++.|++++.++.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 379999999999999999987656899999998765310 00 1 1122233566778899999999998
Q ss_pred ecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 204 LDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 204 ~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
.+..+++.+.+.. .+|+ ++.+|.+|+|||.+|..+
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 8877766666654 3465 489999999999887654
No 223
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.41 E-value=1.8e-07 Score=80.91 Aligned_cols=42 Identities=21% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCCCcccchhh
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~~~~~~~~~ 53 (290)
+.+|++|||||++||++|++|++ | .+|+|+|+++.+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 46899999999999999999976 7 799999999998877665
No 224
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.41 E-value=1.7e-06 Score=75.63 Aligned_cols=101 Identities=23% Similarity=0.239 Sum_probs=77.8
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc--cc---------c---cCChhHHHHHHHHHHhCCcEEEeCc
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR--LL---------E---FIGPKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~--~~---------~---~~~~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
...+++|||+|+.|+.+|..+.. .+.+++++++... .. . ...+.+...+.+.+++.|++++.++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CcccEEEECCcHHHHHHHHHHHh--CCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 34679999999999999999987 4789999875311 00 0 0123567778888889999999999
Q ss_pred eEeecccC---CCceeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 201 RVNLDSVS---EGSDTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 201 ~v~~i~~~---~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.++.+..+ ++...+.+.+|+++.+|.+|+|+|.+|..
T Consensus 289 ~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 289 SASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp CEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99888653 23577888888899999999999987643
No 225
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=1.4e-06 Score=73.83 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=72.5
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHH----------HHHHhCCcEEEeCceEeec
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR----------DWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~gi~~~~~~~v~~i 205 (290)
..+++|||+|..|+.+|..|.+.....+|+++++.+.+. ...+.+...+. +.+++.|++++.++.++.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 85 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-YDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSF 85 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-BCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-ccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEE
Confidence 468999999999999999999864444799999876532 11111111111 0355679999999999877
Q ss_pred ccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 206 SVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 206 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.+. ..+.+.+|+++.+|.+|+|+|.+|..+
T Consensus 86 ~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 86 DPQA--HTVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp ETTT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred ECCC--CEEEECCCCEEECCEEEECCCCCCCCC
Confidence 6543 356667788999999999999987653
No 226
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.39 E-value=1.8e-06 Score=70.15 Aligned_cols=97 Identities=20% Similarity=0.158 Sum_probs=72.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEE-EecCcccc------------ccCC-----hhHHHHHHHHHHhCCcEEE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTL-VHKGSRLL------------EFIG-----PKAGDKTRDWLISKKVDVK 197 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~-~~~~~~~~------------~~~~-----~~~~~~~~~~~~~~gi~~~ 197 (290)
..+++|||+|+.|+.+|..|... +.++++ +++. .+. +.+. .++...+.+.+++.|++++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEE
Confidence 46899999999999999999974 788888 8863 221 1111 3677778888888999999
Q ss_pred eCceEeecccCC--CceeE-EcCCCcEEeccEEEEccCCCCCch
Q 022896 198 LGERVNLDSVSE--GSDTY-LTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 198 ~~~~v~~i~~~~--~~~~v-~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
.+ .+..+ .++ +.+.+ ...++ ++.+|.+|+|+|..|..+
T Consensus 81 ~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 81 MV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 88 77777 555 55664 33344 899999999999877544
No 227
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.37 E-value=7.7e-07 Score=76.41 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=74.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-----------cC---Ch-hHHHHHHHHHHhCCcEEEeCce
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------FI---GP-KAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-----------~~---~~-~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
.+++|||+|..|+.+|..+.+..++.+|+++++.+.+.. .. ++ .+...+.+.+++.|++++.++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 368999999999999999987656899999998864210 00 11 1222335667788999999999
Q ss_pred EeecccCCCceeEEc-CC--CcEEeccEEEEccCCCCCch
Q 022896 202 VNLDSVSEGSDTYLT-ST--GDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 202 v~~i~~~~~~~~v~~-~~--g~~~~~d~vv~a~G~~~~~~ 238 (290)
++.++.+++.+.+.. .+ ++++.+|.+|+|+|.+|..+
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 988876666666543 22 45799999999999887644
No 228
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.37 E-value=3e-07 Score=77.14 Aligned_cols=41 Identities=20% Similarity=0.472 Sum_probs=37.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhh
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~ 53 (290)
++|++|||||++|+++|++|++ |++|+|+|+++..|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 3799999999999999999986 9999999999998877654
No 229
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.36 E-value=2.2e-07 Score=80.35 Aligned_cols=41 Identities=22% Similarity=0.228 Sum_probs=36.4
Q ss_pred cEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 194 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 194 i~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+++.++.|++++.+++++.+.+.+| ++.+|.||+|++...
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHH
Confidence 79999999999988888888999888 799999999998643
No 230
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.36 E-value=2.3e-07 Score=80.63 Aligned_cols=56 Identities=9% Similarity=-0.052 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHhCC-cEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKK-VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~g-i~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+.+.+.+.+++.| ++++.+++|++++.+++++.+.+.+|+++.+|.||+|+|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 67778888888888 999999999999888778888888888899999999999643
No 231
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.36 E-value=2.7e-07 Score=75.34 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=33.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCCcc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFE 48 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~~~ 48 (290)
..+||+|||||++|+++|++|++ |++|+|||++...+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 36899999999999999999975 99999999988755
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.35 E-value=1.6e-06 Score=74.97 Aligned_cols=102 Identities=18% Similarity=0.126 Sum_probs=74.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---C----------ChhHHHHHHHHH-HhCCcEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---I----------GPKAGDKTRDWL-ISKKVDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---~----------~~~~~~~~~~~~-~~~gi~~~~~~~v 202 (290)
.+++|||+|..|+.+|..+.+...+.+|+++++.+..... . ...+.....+.+ +..|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999875458899999987653100 0 011222233445 3459999999999
Q ss_pred eecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+++.+.+.. .+|+ ++.+|.+|+|+|.+|..+
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 88887776666654 4566 799999999999887644
No 233
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.34 E-value=6.8e-07 Score=77.56 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=74.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC-CCCeEEEEecCccccc----------c---CChhHHHHHHHHHHhCCcEEEeCceE
Q 022896 137 RSILIVGGGPTGVELAGEIAVDF-PEKKVTLVHKGSRLLE----------F---IGPKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~-~~~~v~~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
.+++|||+|..|+.+|..+.... ++.+|+++++.+.+.. . ...++.....+.+++.|++++.++.+
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999998752 3489999998764310 0 01122222356677889999999999
Q ss_pred eecccCCCceeEE-cCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYL-TSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~-~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+++.+.+. ..+++++.+|.+|+|+|.+|..+
T Consensus 116 ~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 116 QSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 8887766666554 32245799999999999887654
No 234
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.34 E-value=3e-07 Score=79.97 Aligned_cols=42 Identities=29% Similarity=0.308 Sum_probs=37.2
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
...+||+|||||++||++|+.|++ |.+|+|+|+++..|+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 346899999999999999999986 999999999998887543
No 235
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.30 E-value=3.8e-07 Score=77.79 Aligned_cols=57 Identities=9% Similarity=-0.097 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
..+.+.+.+.+++.|++++++++|+++..+++++.....+|+++.+|.||+++|.++
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 378888999999999999999999999877766553335788899999999999876
No 236
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.30 E-value=3.5e-07 Score=75.84 Aligned_cols=45 Identities=18% Similarity=0.051 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 179 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
..+...+.+.+++.|++++. +.|++++..+ .+.+|.||+|+|.+.
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcCh
Confidence 36888899999999999998 8887665321 267999999999875
No 237
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.29 E-value=1.4e-06 Score=75.05 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=73.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCC---CeEEEEecCcccccc-------------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPE---KKVTLVHKGSRLLEF------------------------------------- 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~---~~v~~~~~~~~~~~~------------------------------------- 176 (290)
.+++|||+|++|+.+|..|.+.... .+|+++++.+.+...
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 3799999999999999999875211 799999987642200
Q ss_pred --------------CChhHHHHHHHHHHhCCcEEEeCceEeecccC---CCc--eeEEcCCCc----EEeccEEEEccCC
Q 022896 177 --------------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVS---EGS--DTYLTSTGD----TINADCHFLCTGK 233 (290)
Q Consensus 177 --------------~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~---~~~--~~v~~~~g~----~~~~d~vv~a~G~ 233 (290)
...++...+....++.+++++++++|+.++.+ ++. +.+.+.+|+ ++.+|.||+|+|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 01123344455556678999999999988765 222 366666665 8999999999998
Q ss_pred CCCch
Q 022896 234 PVGSD 238 (290)
Q Consensus 234 ~~~~~ 238 (290)
.|..+
T Consensus 191 ~p~~p 195 (463)
T 3s5w_A 191 TPRIP 195 (463)
T ss_dssp EECCC
T ss_pred CCCCc
Confidence 77543
No 238
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.28 E-value=9.5e-07 Score=75.91 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=61.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccccceEE-eeeeeeeecc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIV-ASPAINITEN 90 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~ 90 (290)
..+++|||||++|+.+|..|++ |.+|+++|+.+.+.... .+.........+.+ .++++. ...+..++..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~-------~~~~~~~l~~~l~~--~Gv~i~~~~~V~~i~~~ 237 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTM-------DLEVSRAAERVFKK--QGLTIRTGVRVTAVVPE 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-------CHHHHHHHHHHHHH--HTCEEECSCCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccccc-------CHHHHHHHHHHHHH--CCCEEEECCEEEEEEEe
Confidence 4789999999999999999976 99999999987643110 00110000011111 134444 3456666532
Q ss_pred ----eEEecCceEEeccEEEEccCCCCCCC
Q 022896 91 ----EVLTAEGRRVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 91 ----~v~~~~~~~~~~~~vi~a~G~~~~~p 116 (290)
.+.+.++.++.+|.|++|+|.+|+.+
T Consensus 238 ~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 238 AKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp TTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred CCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 24555778899999999999997654
No 239
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.25 E-value=6.2e-06 Score=67.06 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=70.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc---cc--------cc----CChhHHHHHHHHHHhCCcEEEeCce
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---LL--------EF----IGPKAGDKTRDWLISKKVDVKLGER 201 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~---~~--------~~----~~~~~~~~~~~~~~~~gi~~~~~~~ 201 (290)
-.++|||+|+.|+.+|..++. .+.+|+++++... .. +. ..+++.........+.+..+..+..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDI 84 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceee
Confidence 479999999999999999986 4889999987531 00 01 1235666677777888888887766
Q ss_pred EeecccCCCceeEEcCCCcEEeccEEEEccCCCCCchhh
Q 022896 202 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 240 (290)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~l 240 (290)
...... ........+++++.+|.+|+|||.+|..+-+
T Consensus 85 ~~~~~~--~~~~~~~~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 85 KSVEDK--GEYKVINFGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp CEEEEC--SSCEEEECSSCEEEEEEEEECCCEEECCCCC
T ss_pred eeeeee--ecceeeccCCeEEEeceeEEcccCccCcCCC
Confidence 543332 2233445567799999999999988765433
No 240
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.23 E-value=6.5e-07 Score=72.65 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhc-c--CCcEEEEcCCCCcc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFE 48 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~~ 48 (290)
..+||+|||||++|+++|++|+ . |++|+|+|++...+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 3479999999999999999996 3 89999999988765
No 241
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=1.9e-06 Score=74.81 Aligned_cols=99 Identities=21% Similarity=0.304 Sum_probs=70.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHH--------H---------------------
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKT--------R--------------------- 186 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~--------------------- 186 (290)
..+++|||+|..|+.+|..|.....+.+|+++++.+.+. ...+.+.+.+ .
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~-y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP-YMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC-BCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC-CCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 367999999999999999998766789999999876431 1000000000 0
Q ss_pred -----HH---HHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 187 -----DW---LISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 187 -----~~---~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
+. +.+.|++++.++.++.++.+.. .+.+.+|+++.+|.+|+|||.+|..
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEECC
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 00 1246899999999987765443 5667788899999999999988753
No 242
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.22 E-value=8.3e-07 Score=77.79 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=33.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCCcc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFE 48 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~~~ 48 (290)
..+||+|||||++||++|++|++|.+|+|+||....+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCCC
Confidence 3589999999999999999997799999999998654
No 243
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.19 E-value=8.5e-07 Score=79.30 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (290)
.+||+|||||.+||+||++|++ |.+|+||||....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 5899999999999999999986 9999999998754
No 244
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.19 E-value=1e-05 Score=71.10 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=72.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------------------cCC----------------h
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------------FIG----------------P 179 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------------~~~----------------~ 179 (290)
.+++|||+|.+|+.+|..|.+. +.+++++++.+.+.. .+. +
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 4799999999999999999974 789999998654310 001 1
Q ss_pred hHHHHHHHHHHhCC--cEEEeCceEeecccCCC--ceeEEcCCCcEEeccEEEEccCCC
Q 022896 180 KAGDKTRDWLISKK--VDVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 180 ~~~~~~~~~~~~~g--i~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
++...+....++.+ .+++.+++|++++.+++ .+.+.+.+|+++.+|.||+|+|..
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 34445555566665 67899999998887554 477888889899999999999964
No 245
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.19 E-value=2.7e-06 Score=73.88 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=68.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc----------cCCh-hHHHHHHHHH--HhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------FIGP-KAGDKTRDWL--ISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~----------~~~~-~~~~~~~~~~--~~~gi~~~~~~~v 202 (290)
.++|+|||+|..|+.+|..|.. .+.+|+++++.+.+.- .+.+ .+...+.+.+ +..+++++.+ .+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v 118 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDT--KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EA 118 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EE
T ss_pred CCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EE
Confidence 4689999999999999999975 4789999999875421 0111 1112233333 2347888755 67
Q ss_pred eecccCCCceeEE------------------cCCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYL------------------TSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~------------------~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
+.++.+.+.+.+. ..++.+++||.+|+|+|..|+..
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 7777666555443 24566899999999999987653
No 246
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.17 E-value=2.5e-06 Score=73.17 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=62.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~ 88 (290)
..+++|||||+.|+.+|..|++ |.+|+++++.+.+.... .+.. ...+.+.+ .+++++ ...+..+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~----~~~l~~~l~~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSF-------DPMI----SETLVEVMNAEGPQLHTNAIPKAVV 235 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHH----HHHHHHHHHHHSCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhh-------hHHH----HHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 5789999999999999999976 99999999987543110 1111 01111111 133443 23555554
Q ss_pred cc-----eEEecCceEEeccEEEEccCCCCCCC
Q 022896 89 EN-----EVLTAEGRRVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 89 ~~-----~v~~~~~~~~~~~~vi~a~G~~~~~p 116 (290)
.. .+.+.+|.++.+|.+++|+|.+|+.+
T Consensus 236 ~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 236 KNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp ECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 32 46677888899999999999998765
No 247
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.17 E-value=2.3e-06 Score=73.69 Aligned_cols=94 Identities=27% Similarity=0.322 Sum_probs=61.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~ 88 (290)
..+++|||||++|+.+|..|++ |.+|+|+|+.+.+.... .+.. ...+.+.+ .+++++ ...+..++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~----~~~l~~~l~~~gV~i~~~~~v~~i~ 237 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG-------DPET----AALLRRALEKEGIRVRTKTKAVGYE 237 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHH----HHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccccc-------CHHH----HHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 4789999999999999999976 99999999987643210 0001 00111111 134444 33555554
Q ss_pred cc----eEEec-C--ce--EEeccEEEEccCCCCCCCC
Q 022896 89 EN----EVLTA-E--GR--RVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 89 ~~----~v~~~-~--~~--~~~~~~vi~a~G~~~~~p~ 117 (290)
.. .+.+. + |. ++.+|.|++|+|.+|+.+.
T Consensus 238 ~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 238 KKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred EeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 32 24443 4 65 7999999999999987654
No 248
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.17 E-value=1e-06 Score=73.88 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=30.9
Q ss_pred CcEEEEcCChHHHHHHHHhc-c--CCcEEEEcCCCCc
Q 022896 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYF 47 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~ 47 (290)
+||+|||||++|+++|..|+ . |.+|+|||+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 48999999999999999996 4 8999999998765
No 249
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.16 E-value=2.7e-06 Score=73.17 Aligned_cols=94 Identities=17% Similarity=0.288 Sum_probs=60.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~ 88 (290)
..+++|||||++|+.+|..|++ |.+|+++++.+.+.... .+... ..+.+.+ .++++. ...+..++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~----~~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTY-------DSELT----APVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS-------CHHHH----HHHHHHHHHHTCEEETTCEEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccccc-------CHHHH----HHHHHHHHHCCCEEEECCEEEEEE
Confidence 4789999999999999999986 99999999987653211 01110 0111111 133333 23455554
Q ss_pred cceE--EecCc--eEEeccEEEEccCCCCCCCC
Q 022896 89 ENEV--LTAEG--RRVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 89 ~~~v--~~~~~--~~~~~~~vi~a~G~~~~~p~ 117 (290)
...+ ...+| .++.+|.+++|+|.+|+.+.
T Consensus 240 ~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 240 NGCLLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp TTEEEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred eCCEEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 3222 22245 58999999999999987653
No 250
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.15 E-value=1.6e-06 Score=71.57 Aligned_cols=34 Identities=35% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++||+|||||++|+.+|++|++ |.+|+|+|++..
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 3799999999999999999986 999999998763
No 251
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.15 E-value=3.6e-06 Score=70.59 Aligned_cols=93 Identities=19% Similarity=0.297 Sum_probs=62.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~ 88 (290)
..+++|||||+.|+.+|..|++ |.+|+++|+.+.+.... ..... ...+.+.+ .++++. ...+..+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~----~~~l~~~l~~~gv~i~~~~~v~~i~ 214 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL------LHPAA----AKAVQAGLEGLGVRFHLGPVLASLK 214 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT------SCHHH----HHHHHHHHHTTTCEEEESCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc------cCHHH----HHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 5899999999999999999976 99999999987643211 00000 01111111 134443 33455554
Q ss_pred cc----eEEecCceEEeccEEEEccCCCCCC
Q 022896 89 EN----EVLTAEGRRVVYDYLVIATGHKDPV 115 (290)
Q Consensus 89 ~~----~v~~~~~~~~~~~~vi~a~G~~~~~ 115 (290)
.. .+.+.++.++.+|.+++|+|..|+.
T Consensus 215 ~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 215 KAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 32 4667788889999999999998764
No 252
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.14 E-value=1.4e-06 Score=78.22 Aligned_cols=42 Identities=36% Similarity=0.529 Sum_probs=37.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
...+||+|||||++||++|++|.+ |++|+|+|+++..|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 456899999999999999999975 999999999998886543
No 253
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.14 E-value=3e-06 Score=72.95 Aligned_cols=93 Identities=17% Similarity=0.302 Sum_probs=62.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~ 88 (290)
..+++|||||.+|+.+|..|++ |.+|+++++.+.+.... .+... ..+.+.+ .++++. ...+..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~-------~~~~~----~~l~~~l~~~gv~i~~~~~v~~i~ 234 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQF-------DPLLS----ATLAENMHAQGIETHLEFAVAALE 234 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHHH----HHHHHHHHHTTCEEESSCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccccc-------CHHHH----HHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4789999999999999999976 99999999987543111 01110 0111111 134443 23455554
Q ss_pred cc----eEEecCce-EEeccEEEEccCCCCCCC
Q 022896 89 EN----EVLTAEGR-RVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 89 ~~----~v~~~~~~-~~~~~~vi~a~G~~~~~p 116 (290)
.. .+.+.+|. ++.+|.+++|+|..|+.+
T Consensus 235 ~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 235 RDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 32 46677887 899999999999998765
No 254
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.13 E-value=1.6e-06 Score=74.92 Aligned_cols=54 Identities=15% Similarity=0.047 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHhC--------CcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCC
Q 022896 180 KAGDKTRDWLISK--------KVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 180 ~~~~~~~~~~~~~--------gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
.+.+.+.+.+.+. |.+++.++.|++++.+++++.|.+.+|+++.+|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4555555555443 67899999999999888888899999989999999999875
No 255
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.13 E-value=1.4e-06 Score=78.09 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=31.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~ 46 (290)
.+||+||||||+||++|..|++ |.+|+|||+.+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 5899999999999999999965 999999999875
No 256
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.13 E-value=2.3e-05 Score=69.38 Aligned_cols=98 Identities=19% Similarity=0.144 Sum_probs=73.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-ccc-----------------------c----------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LLE-----------------------F---------------- 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~-~~~-----------------------~---------------- 176 (290)
.+|+|||+|..|+++|..++. .+.+|.++++... +.. .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAAR--MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CCEEEECChHHHHHHHHHHHh--CCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 479999999999999999986 4889999997631 100 0
Q ss_pred --------------CC-hhHHHHHHHHHHh-CCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 177 --------------IG-PKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 177 --------------~~-~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.+ ..+...+.+.+++ .|++++ ++.++.+..+++. ..|.+.+|.++.+|.||+|+|..+..
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 00 1345566777777 699995 5688888766665 46777888889999999999987643
No 257
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.12 E-value=1.8e-06 Score=78.61 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=38.0
Q ss_pred CCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCC
Q 022896 192 KKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 233 (290)
Q Consensus 192 ~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 233 (290)
.|+++++++.|++++.+++++.+.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 488999999999999888889999889989999999999864
No 258
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.11 E-value=1.4e-06 Score=76.22 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHh-CCcEEEeCceEeecccCCCc--eeEEcCCCcEEeccEEEEccCCCCC
Q 022896 180 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+...+.+.+++ .|++++.+ .|++++.++++ +.+.+.+|+++.+|.||.|+|..+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 677888888888 89999999 59888766544 4677778778999999999998753
No 259
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.11 E-value=1.9e-06 Score=78.98 Aligned_cols=41 Identities=34% Similarity=0.523 Sum_probs=36.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccch
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~ 51 (290)
...+||+|||||++||++|++|.+ |++|+|||+++.+|+.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 346899999999999999999975 99999999999888654
No 260
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=98.11 E-value=6.7e-06 Score=70.39 Aligned_cols=34 Identities=24% Similarity=0.551 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+.++++|+|+|-.|.++|..|.. |++|+++|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999975 99999999987
No 261
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.10 E-value=2.9e-05 Score=67.50 Aligned_cols=100 Identities=24% Similarity=0.263 Sum_probs=71.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCccccc-----------------------------cC---------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLE-----------------------------FI--------- 177 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~-----------------------------~~--------- 177 (290)
.+++|||+|..|+.+|..+.++.+ +.+|+++++.+ +.. .+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 479999999999999999987544 78999999874 100 00
Q ss_pred Ch-h-----------HHHHHHHHHHhCCcEEEeCceEeecccC----CCceeEEcCCCc--EEeccEEEEccCCCCCch
Q 022896 178 GP-K-----------AGDKTRDWLISKKVDVKLGERVNLDSVS----EGSDTYLTSTGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 178 ~~-~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~----~~~~~v~~~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
+. . +...+.+.+++.|++++.++ ++.+..+ ++.+.+...+|+ .+.+|.+|+|+|..|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 00 1 12234566788899999986 5444431 144677777776 799999999999887644
No 262
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.10 E-value=1.5e-05 Score=67.22 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=72.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------CCh-h---H-----------------------
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------IGP-K---A----------------------- 181 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-------~~~-~---~----------------------- 181 (290)
..+|+|||+|..|+.+|..|.. .+.+|+++++.+..... +.+ . .
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 103 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIAD 103 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEEC
Confidence 4689999999999999999986 48899999987542110 000 0 0
Q ss_pred -----------------------HHHHHHHHHhC--CcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 182 -----------------------GDKTRDWLISK--KVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 182 -----------------------~~~~~~~~~~~--gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
...+.+.|.+. +++++.+++|++++.+++++.+.+.+|+++.+|.||.|.|..+.
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 00122222221 36788999999998887778888889988999999999998654
No 263
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.09 E-value=1.9e-05 Score=64.55 Aligned_cols=101 Identities=20% Similarity=0.150 Sum_probs=71.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------C
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------I 177 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~ 177 (290)
..+++|||+|..|+.+|..+..+.++.+|.++++.+.+... .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 46899999999999999999875458899999987543200 0
Q ss_pred ChhHHHHHHHHHHh-CCcEEEeCceEeecccCC-----------------C--c-eeEEc------C--------CCcEE
Q 022896 178 GPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSE-----------------G--S-DTYLT------S--------TGDTI 222 (290)
Q Consensus 178 ~~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~-----------------~--~-~~v~~------~--------~g~~~ 222 (290)
..++...+.+.+++ .|++++.++.++++..++ + . ..+.. . +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 12344666777777 599999999998886654 2 1 12211 1 22479
Q ss_pred eccEEEEccCCCCC
Q 022896 223 NADCHFLCTGKPVG 236 (290)
Q Consensus 223 ~~d~vv~a~G~~~~ 236 (290)
.++.||.|+|....
T Consensus 239 ~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 239 NAPVIISTTGHDGP 252 (344)
T ss_dssp ECSEEEECCCSSSS
T ss_pred EcCEEEECCCCCch
Confidence 99999999998653
No 264
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.09 E-value=1.8e-06 Score=76.69 Aligned_cols=34 Identities=24% Similarity=0.150 Sum_probs=31.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.+||||||||++||+||++|++ |.+|+||||...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5899999999999999999986 999999999874
No 265
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=9.1e-06 Score=70.64 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=62.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccccceEE-eeeeeeeecc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIV-ASPAINITEN 90 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~ 90 (290)
..+++|||||+.|+.+|..|++ |.+|+++++.+.+.... .+.........+.+ .++++. ...+..+...
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKF-------DESVINVLENDMKK--NNINIVTFADVVEIKKV 246 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTS-------CHHHHHHHHHHHHH--TTCEEECSCCEEEEEES
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCccc-------chhhHHHHHHHHHh--CCCEEEECCEEEEEEEc
Confidence 5789999999999999999976 99999999987643110 11110100011111 133443 3345555432
Q ss_pred -----eEEecCceE-EeccEEEEccCCCCCCC
Q 022896 91 -----EVLTAEGRR-VVYDYLVIATGHKDPVP 116 (290)
Q Consensus 91 -----~v~~~~~~~-~~~~~vi~a~G~~~~~p 116 (290)
.+.+.+|.+ +.+|.+++|+|.+|+.+
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 466677877 99999999999998764
No 266
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.08 E-value=5.2e-06 Score=72.54 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=61.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccccceEE-eeeeeeeec
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIV-ASPAINITE 89 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~ 89 (290)
...+++|||||+.|+-.|..+++ |.+|+|++++..+... .++........+.. .++.+. ...+..+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~--------D~ei~~~l~~~l~~--~gi~~~~~~~v~~~~~ 291 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGF--------DQQCAVKVKLYMEE--QGVMFKNGILPKKLTK 291 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTS--------CHHHHHHHHHHHHH--TTCEEEETCCEEEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccccc--------chhHHHHHHHHHHh--hcceeecceEEEEEEe
Confidence 35889999999999999999987 9999999986543211 11111111111111 122332 223333332
Q ss_pred c----eEEecCceEEeccEEEEccCCCCCCCC
Q 022896 90 N----EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 90 ~----~v~~~~~~~~~~~~vi~a~G~~~~~p~ 117 (290)
. .+...++..+.+|.|++|+|.+|+...
T Consensus 292 ~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 292 MDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp ETTEEEEEETTSCEEEESEEEECSCEEESCGG
T ss_pred cCCeEEEEEcCCCeEEEEEEEEcccccCCccc
Confidence 2 466777888899999999999998765
No 267
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.07 E-value=3.2e-05 Score=68.35 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=73.6
Q ss_pred hcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-ccc-----------------------c-------------
Q 022896 134 KSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LLE-----------------------F------------- 176 (290)
Q Consensus 134 ~~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~-~~~-----------------------~------------- 176 (290)
....+|+|||+|..|+++|..++. .+.+|.++++... +.. .
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVAR--GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHH--CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 344689999999999999999987 4889999997631 100 0
Q ss_pred -----------------CC-hhHHHHHHHHHHh-CCcEEEeCceEeecccCCCcee-EEcCCCcEEeccEEEEccCCCCC
Q 022896 177 -----------------IG-PKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 177 -----------------~~-~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
.+ ..+...+.+.+++ .|++++. ..++.+..+++.+. +.+.+|+++.+|.||+|+|..++
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00 1345566777777 4999965 47877776666644 77888889999999999998754
No 268
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=1.5e-05 Score=68.75 Aligned_cols=98 Identities=24% Similarity=0.194 Sum_probs=70.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------------------------------------CC
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------------------------------------IG 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-------------------------------------~~ 178 (290)
..+++|||+|+.|+.+|..+.+. +.+|+++++.+.+... .+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 46899999999999999999874 7899999988643110 00
Q ss_pred h-h-----------HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCCch
Q 022896 179 P-K-----------AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 179 ~-~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~ 238 (290)
. . +...+.+.+++.|++++.++.+. .+.+.+.+.+.+| +++.+|.+|+|+|..|..+
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 0 0 11123455677899999998763 3445567776677 6899999999999887543
No 269
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.06 E-value=5.7e-06 Score=70.92 Aligned_cols=89 Identities=16% Similarity=0.120 Sum_probs=67.5
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-------c--CChhHHHHHHHHHHhCCcEEEeCceEeec
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-------F--IGPKAGDKTRDWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~gi~~~~~~~v~~i 205 (290)
..++|+|||+|+.|+.+|..|... +.+|+++++.+.+.. . +..++.....+.+++.|++++.++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~-- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG-- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec--
Confidence 357899999999999999999974 789999998876421 1 244566777888899999999998762
Q ss_pred ccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 206 SVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 206 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
.. +.+.++ .+.+|.||+|+|..
T Consensus 197 ----~~--v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 ----RD--ASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp ----TT--BCHHHH-HSSCSEEEECCCCC
T ss_pred ----cE--EEhhHh-HhhCCEEEEecCCC
Confidence 11 222222 35799999999986
No 270
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.05 E-value=1.9e-05 Score=68.21 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=69.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------CC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~~ 178 (290)
.+++|||+|+.|+.+|..+.+. +.+|+++++.+.+... .+
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 5799999999999999999874 8899999988643110 00
Q ss_pred -hh-----------HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCC-C-cEEeccEEEEccCCCCCch
Q 022896 179 -PK-----------AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST-G-DTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 179 -~~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~-g-~~~~~d~vv~a~G~~~~~~ 238 (290)
+. +...+.+.+++.|++++.++... .+.+.+.+.+.+ | +++.+|.+|+|||..|..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI---TGKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---EETTEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 00 11123566778899999987642 244567777776 4 5799999999999887543
No 271
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.04 E-value=2.1e-06 Score=77.12 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc------CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF------SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~------g~~v~vie~~~~ 46 (290)
++||+||||||+||++|..|++ |.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5899999999999999999965 999999999764
No 272
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.8e-05 Score=67.96 Aligned_cols=96 Identities=27% Similarity=0.269 Sum_probs=69.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------------------------------------CCh-
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF------------------------------------IGP- 179 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~------------------------------------~~~- 179 (290)
.+++|||+|+.|+.+|..+.+ .+.+|+++++. .+... .+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 479999999999999999987 38899999986 22100 000
Q ss_pred -----------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC-cEEeccEEEEccCCCCCch
Q 022896 180 -----------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG-DTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 180 -----------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g-~~~~~d~vv~a~G~~~~~~ 238 (290)
.+...+.+.+++.|++++.++.+. .+.+.+.+.+.+| +++.+|.+|+|+|..|..+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 022224556778899999998663 3455677777777 6899999999999987543
No 273
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.02 E-value=5.1e-05 Score=66.94 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=74.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-ccc-----------------------c---------------
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LLE-----------------------F--------------- 176 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~-~~~-----------------------~--------------- 176 (290)
..+|+|||+|..|+++|..++. .+.+|.++++... +.. .
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 3589999999999999999986 4889999997631 100 0
Q ss_pred ---------------CC-hhHHHHHHHHHHh-CCcEEEeCceEeecccCCCc-eeEEcCCCcEEeccEEEEccCCCCCc
Q 022896 177 ---------------IG-PKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPVGS 237 (290)
Q Consensus 177 ---------------~~-~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~ 237 (290)
.+ ..+...+.+.+++ .|++++ ++.|+.+..+++. ..|.+.+|.++.+|.||+|+|..++.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 1245566777777 599995 6789888776665 45778888899999999999987654
No 274
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.02 E-value=2.3e-05 Score=67.72 Aligned_cols=94 Identities=22% Similarity=0.225 Sum_probs=68.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------CC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~~ 178 (290)
.+++|||+|+.|+.+|..+.+. +.+|+++++.+.+... ++
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 5799999999999999999874 7899999985433100 00
Q ss_pred -h-----------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cE------EeccEEEEccCCCC
Q 022896 179 -P-----------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DT------INADCHFLCTGKPV 235 (290)
Q Consensus 179 -~-----------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~------~~~d~vv~a~G~~~ 235 (290)
. .+...+.+.+++.|++++.++.+. .+++.+.+.+.+| ++ +.+|.+|+|+|.+|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 011124456778899999998774 2455677777777 56 99999999999876
No 275
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.01 E-value=1.4e-05 Score=68.80 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=69.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------------------------------CCh-h----
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------------------------------IGP-K---- 180 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-------------------------------~~~-~---- 180 (290)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.+.+... ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDR 82 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHH
Confidence 479999999999999999987 48899999976654211 000 0
Q ss_pred ---H---H--HHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcE--EeccEEEEccCCCCCch
Q 022896 181 ---A---G--DKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDT--INADCHFLCTGKPVGSD 238 (290)
Q Consensus 181 ---~---~--~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~--~~~d~vv~a~G~~~~~~ 238 (290)
+ . ..+.+.+++.|++++.+ .++.+ +.+.+.+...+|++ +.+|.+|+|+|..|..+
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 83 KDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 0 0 33344455679999877 45433 35567777788888 99999999999877644
No 276
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=1.8e-05 Score=68.20 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=70.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------CC
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~~ 178 (290)
.+++|||+|..|+.+|..+.+ .+.+|+++++.+.+... .+
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 479999999999999999987 48899999988543110 00
Q ss_pred -hh-----------HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCCch
Q 022896 179 -PK-----------AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 179 -~~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~ 238 (290)
.. +...+.+.+++.|++++.++.+. .+.+.+.+.+.+| +++.+|.+|+|||..|..+
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF---ETAHSIRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE---EETTEEEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---eeCCEEEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 00 11123455677899999887652 3455677777777 6899999999999887543
No 277
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.01 E-value=2.5e-06 Score=76.33 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-------CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-------SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-------g~~v~vie~~~~ 46 (290)
.+||||||||+|||+||++|++ |.+|+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 5899999999999999999964 899999999753
No 278
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.01 E-value=3.5e-06 Score=73.75 Aligned_cols=36 Identities=42% Similarity=0.566 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCCc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~~ 47 (290)
..||+||||||++|+.+|.+|.+ +++|+|||++...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 37999999999999999999975 7899999998753
No 279
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.00 E-value=2.3e-05 Score=67.48 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=69.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------------------------------------CCh-
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF------------------------------------IGP- 179 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~------------------------------------~~~- 179 (290)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.. +... .+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHH
Confidence 479999999999999999987 488999999862 2100 000
Q ss_pred -----------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCCc
Q 022896 180 -----------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGS 237 (290)
Q Consensus 180 -----------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~ 237 (290)
.+...+.+.+++.|++++.++.+. .+++.+.+.+.+| +++.+|.+|+|+|..|..
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 011223566778899999888653 4555677777777 689999999999998754
No 280
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.00 E-value=1.4e-05 Score=69.25 Aligned_cols=94 Identities=22% Similarity=0.257 Sum_probs=59.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCccccccccccccccc-cceEE-eeeeeeeec
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV-NGRIV-ASPAINITE 89 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~~~~~ 89 (290)
..+++|||||+.|+.+|..|++ |.+|+++++.+.+.... .+.... .+.+.+. .+.+. ...+..+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~~----~l~~~l~~~V~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ-------DEEMKR----YAEKTFNEEFYFDAKARVISTIE 242 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC-------CHHHHH----HHHHHHHTTSEEETTCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC-------CHHHHH----HHHHHHhhCcEEEECCEEEEEEE
Confidence 5889999999999999999986 99999999988653211 001100 0111110 12332 234444433
Q ss_pred c----eEEec--Cc--eEEeccEEEEccCCCCCCCC
Q 022896 90 N----EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 90 ~----~v~~~--~~--~~~~~~~vi~a~G~~~~~p~ 117 (290)
. .+.+. +| .++.+|.|++|+|..|+.+.
T Consensus 243 ~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 243 KEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred cCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 2 24432 56 68999999999999976553
No 281
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.98 E-value=4.7e-06 Score=74.58 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=31.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhc---c--CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQ---F--SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~---~--g~~v~vie~~~~ 46 (290)
..+||||||||++||+||++|+ + |.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3589999999999999999998 3 999999999874
No 282
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.98 E-value=8e-06 Score=70.85 Aligned_cols=99 Identities=19% Similarity=0.110 Sum_probs=70.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc----------CC---hhHHHHHHHHHHhCCcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----------IG---PKAGDKTRDWLISKKVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~gi~~~~~~~v 202 (290)
..+++|||+|..|+.+|..|.++ .+|+++++.+.+... +. .++...+.+.+ +.|++++.++.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 45799999999999999999863 899999987754221 11 12222333333 569999999999
Q ss_pred eecccCCCceeEEc-CCCc--EEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
..+..+++.+.+.. .+++ .+.+|.+|+|+|..|..+
T Consensus 184 ~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 77776655544433 3453 689999999999877543
No 283
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.96 E-value=1.8e-05 Score=68.47 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=67.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------------------------------------CCh-
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF------------------------------------IGP- 179 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~------------------------------------~~~- 179 (290)
.+++|||+|..|+.+|..+.. .+.+|+++++.+.+... .+.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 479999999999999999987 48899999985543100 000
Q ss_pred h-----------HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC------------cEEeccEEEEccCCCCC
Q 022896 180 K-----------AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG------------DTINADCHFLCTGKPVG 236 (290)
Q Consensus 180 ~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g------------~~~~~d~vv~a~G~~~~ 236 (290)
. +...+.+.+++.|++++.++.+. .+++.+.+.+.+| .++.+|.+|+|+|.+|.
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 0 11123456677899999888653 3444566655455 57999999999999875
Q ss_pred c
Q 022896 237 S 237 (290)
Q Consensus 237 ~ 237 (290)
.
T Consensus 162 ~ 162 (482)
T 1ojt_A 162 K 162 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 284
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.95 E-value=9.3e-05 Score=64.12 Aligned_cols=95 Identities=23% Similarity=0.269 Sum_probs=69.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc----------------------------C---------C
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----------------------------I---------G 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----------------------------~---------~ 178 (290)
..+++|||+|+.|+.+|..+.+ .+.+|+++++.+.+... + +
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ--LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 3689999999999999999987 48899999986543210 0 0
Q ss_pred ------------hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCC
Q 022896 179 ------------PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPV 235 (290)
Q Consensus 179 ------------~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~ 235 (290)
..+...+...+++.+++++.+... ..+.+.+.+...+| .++.+|.+|+|||..|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~---~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK---VLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE---ECSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE---EecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 011122445567789999988755 24556677887777 4799999999999876
No 285
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.94 E-value=5.5e-06 Score=72.82 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (290)
..+|++|||||++|+.+|.+|.+ |.+|+|+|++...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 46999999999999999999976 9999999998753
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.93 E-value=8e-06 Score=70.10 Aligned_cols=92 Identities=14% Similarity=0.043 Sum_probs=68.1
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--------ccC--ChhHHHHHHHHHHhCCcEEEeCceEee
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EFI--GPKAGDKTRDWLISKKVDVKLGERVNL 204 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~gi~~~~~~~v~~ 204 (290)
...+++|||+|+.|+.+|..|....++.+|+++++.+.+. +.+ ...+...+.+.+++.|++++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3579999999999999999998763448999999887653 111 23456667788888999999987662
Q ss_pred cccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 205 DSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 205 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.. +.+.+ ..+.+|.+|+|||..+
T Consensus 84 -----~~--V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RD--VTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TT--BCHHH-HHHHSSEEEECCCCCE
T ss_pred -----eE--EEecc-ceEEcCEEEEecCcCC
Confidence 11 22223 2478999999999874
No 287
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.0001 Score=63.61 Aligned_cols=97 Identities=23% Similarity=0.228 Sum_probs=69.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc----------------------------------------
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------------------------------- 175 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------------------------------- 175 (290)
..+++|||+|+.|+.+|..+.. .+.+|+++++.+ +..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 87 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKE 87 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGG
T ss_pred cCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccc
Confidence 3589999999999999999987 488999999864 100
Q ss_pred --cCCh------------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc--EEeccEEEEccCCCCCch
Q 022896 176 --FIGP------------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD--TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 176 --~~~~------------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~d~vv~a~G~~~~~~ 238 (290)
..+. .+...+.+.+++.|++++.++ ++.+ +.+.+.+.+.+|+ ++.+|.+|+|+|..|..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 88 HLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp GCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 0000 111223455677899999885 4333 4455777777776 799999999999887654
No 288
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.92 E-value=0.00012 Score=61.64 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=69.0
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------CChhHH----------------------------
Q 022896 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------IGPKAG---------------------------- 182 (290)
Q Consensus 138 ~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-------~~~~~~---------------------------- 182 (290)
+|+|||+|+.|+-+|..|.. .+.+|+++++.+.+... +.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~--~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK--HGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEE
T ss_pred EEEEECcCHHHHHHHHHHHh--CCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeE
Confidence 79999999999999999997 48999999876543110 001000
Q ss_pred -------------------------------HHHHHHHHh-CCcEEEeCceEeecccCCC-ceeEEcCCCcEEeccEEEE
Q 022896 183 -------------------------------DKTRDWLIS-KKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFL 229 (290)
Q Consensus 183 -------------------------------~~~~~~~~~-~gi~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~ 229 (290)
..+.+.|.+ .+.++++++.+++++..++ .+.+.+.||+++++|.||-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 81 YNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp ECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred ecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEE
Confidence 113333322 2456888999988875444 5889999999999999999
Q ss_pred ccCCCC
Q 022896 230 CTGKPV 235 (290)
Q Consensus 230 a~G~~~ 235 (290)
|-|..+
T Consensus 161 ADG~~S 166 (412)
T 4hb9_A 161 ADGSNS 166 (412)
T ss_dssp CCCTTC
T ss_pred CCCCCc
Confidence 999865
No 289
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.91 E-value=2.8e-05 Score=67.29 Aligned_cols=94 Identities=18% Similarity=0.286 Sum_probs=63.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEEe-eeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVA-SPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~v~~~~ 88 (290)
..+++|||+|+.|+.+|..|++ |.+|+++++.+.+.... .+.. ...+.+.+ .+++++. ..+..+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~-------~~~~----~~~l~~~l~~~Gv~i~~~~~V~~i~ 259 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNF-------DYDL----RQLLNDAMVAKGISIIYEATVSQVQ 259 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHH----HHHHHHHHHHHTCEEESSCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccccc-------CHHH----HHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 5789999999999999999976 99999999987543110 0111 11111111 1344443 4566665
Q ss_pred cc----eEEecCceEEeccEEEEccCCCCCCCC
Q 022896 89 EN----EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (290)
Q Consensus 89 ~~----~v~~~~~~~~~~~~vi~a~G~~~~~p~ 117 (290)
.. .+.+.++.++.+|.|++|+|..|....
T Consensus 260 ~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 260 STENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred eeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 43 477778888999999999999876553
No 290
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.90 E-value=5.3e-06 Score=71.16 Aligned_cols=90 Identities=12% Similarity=-0.004 Sum_probs=67.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhh-hCC----CCeEEEEecCccccc--------c--CChhHHHHHHHHHHhCCcEEEeCc
Q 022896 136 ARSILIVGGGPTGVELAGEIAV-DFP----EKKVTLVHKGSRLLE--------F--IGPKAGDKTRDWLISKKVDVKLGE 200 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~-~~~----~~~v~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~gi~~~~~~ 200 (290)
.++++|||+|+.|+.+|..|.. ..+ +.+|+++++.+.+.. . ...++...+.+.+++.|++++.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999986 433 789999998865432 1 123566777788888999999885
Q ss_pred eEeecccCCCceeEEcCCCcEEeccEEEEccCCC
Q 022896 201 RVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 234 (290)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 234 (290)
.+ +.. +.+.++ .+.+|.||+|+|..
T Consensus 83 ~v------~~~--v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV------GEH--VQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB------TTT--BCHHHH-HHHSSEEEECCCCC
T ss_pred EE------CCE--EEECCC-eEeCCEEEEeeCCC
Confidence 43 112 333344 47899999999996
No 291
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.88 E-value=4.4e-06 Score=74.79 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=32.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C--------CcEEEEcCCC-Cc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S--------ADVTLIDPKE-YF 47 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g--------~~v~vie~~~-~~ 47 (290)
.++|+|||||++||++|++|++ | ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999975 7 9999999998 77
No 292
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.87 E-value=1.8e-05 Score=69.14 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=61.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeeeeeec
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAINITE 89 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~~~~ 89 (290)
.+++|||||..|+.+|..|++ |.+|+++++.+.+.... .+.. ...+.+.+ .+++++ ...+..+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~-------~~~~----~~~l~~~l~~~GV~i~~~~~V~~i~~ 283 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIK-------DNET----RAYVLDRMKEQGMEIISGSNVTRIEE 283 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCC-------SHHH----HHHHHHHHHHTTCEEESSCEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccc-------cHHH----HHHHHHHHHhCCcEEEECCEEEEEEE
Confidence 889999999999999999976 99999999987543210 0111 11111111 134443 335555543
Q ss_pred --c------eEEecCce-EEeccEEEEccCCCCCCC
Q 022896 90 --N------EVLTAEGR-RVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 90 --~------~v~~~~~~-~~~~~~vi~a~G~~~~~p 116 (290)
+ .+.+.+|. ++.+|.|++|+|..|+.+
T Consensus 284 ~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 284 DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp CTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred cCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 1 25566776 899999999999998754
No 293
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.85 E-value=6.7e-05 Score=64.60 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=67.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc--------------------------cccc---C-------C-
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR--------------------------LLEF---I-------G- 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~--------------------------~~~~---~-------~- 178 (290)
..+++|||+|..|+.+|..+.+ .+.+|+++++... ..+. + +
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4689999999999999999987 4789999998731 0000 0 0
Q ss_pred hhHHH-------H-----HHHHHHhC-CcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCCch
Q 022896 179 PKAGD-------K-----TRDWLISK-KVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 179 ~~~~~-------~-----~~~~~~~~-gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~ 238 (290)
..+.. . ..+.+++. |++++.+. ++.+ +.+.+.+.+.+| +++.+|.+|+|||.+|..+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK--DDQSLTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE--ETTEEEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc--cCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 11111 1 12345556 99998874 4333 345677777777 6799999999999887644
No 294
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.84 E-value=8.8e-06 Score=71.24 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCCc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYF 47 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~~ 47 (290)
..+|+||||||++|+.+|.+|.++.+|+|+|++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 359999999999999999999889999999998764
No 295
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.83 E-value=2.4e-05 Score=67.85 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=62.5
Q ss_pred CCcEEEEcCChHHHHHHHHhc-c---CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEE-eeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIV-ASPAI 85 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~ 85 (290)
..+++|||||..|+.+|..|+ . |.+|+++++.+.+.... .+.. ...+.+.+ .+++++ ...+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~-------d~~~----~~~l~~~l~~~GV~i~~~~~v~ 259 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGF-------DETI----REEVTKQLTANGIEIMTNENPA 259 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTS-------CHHH----HHHHHHHHHHTTCEEEESCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccccc-------CHHH----HHHHHHHHHhCCCEEEeCCEEE
Confidence 478999999999999999995 4 89999999987643110 1111 11111111 134443 33556
Q ss_pred eeecc-----eEEecCceEEeccEEEEccCCCCCCC
Q 022896 86 NITEN-----EVLTAEGRRVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 86 ~~~~~-----~v~~~~~~~~~~~~vi~a~G~~~~~p 116 (290)
.+... .+.+.+|.++.+|.|++|+|.+|+.+
T Consensus 260 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 260 KVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 66432 46677888899999999999998754
No 296
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.82 E-value=1.2e-05 Score=70.80 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~ 45 (290)
..||+||||||.||+.+|.+|.+ +.+|+|||++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46999999999999999999985 79999999987
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.82 E-value=5.2e-05 Score=68.32 Aligned_cols=87 Identities=24% Similarity=0.267 Sum_probs=65.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------CC-----hhHHHHHHHHHHhCCcEEEeCceEee
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF------IG-----PKAGDKTRDWLISKKVDVKLGERVNL 204 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~gi~~~~~~~v~~ 204 (290)
.++++|||+|+.|+.+|..+.. .+.+|+++++.+.+... .. .++...+.+.+++.|++++.++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 4789999999999999999986 48899999987654221 11 12344566777888999999986632
Q ss_pred cccCCCceeEEcCCCcEE-eccEEEEccCCCCCchh
Q 022896 205 DSVSEGSDTYLTSTGDTI-NADCHFLCTGKPVGSDW 239 (290)
Q Consensus 205 i~~~~~~~~v~~~~g~~~-~~d~vv~a~G~~~~~~~ 239 (290)
. .+ .+|.+|+|||..|..+-
T Consensus 451 ~---------------~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 451 D---------------QLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp S---------------SSCCSSEEEECCCEEECCCC
T ss_pred H---------------HhhcCCEEEEccCCCcCCCC
Confidence 1 13 89999999999876543
No 298
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.79 E-value=1.4e-05 Score=70.32 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=31.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~~ 46 (290)
..||+||||||.||+.+|.+|.+ + .+|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35999999999999999999986 4 79999999876
No 299
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.78 E-value=8.8e-05 Score=64.05 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=67.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------------------------------------CC-
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF------------------------------------IG- 178 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~------------------------------------~~- 178 (290)
..+++|||+|+.|+.+|..+.+ .+.+|+++++.. +... ++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAE--LGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4689999999999999999997 488999999663 2100 00
Q ss_pred -----------hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCCch
Q 022896 179 -----------PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 179 -----------~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
..+...+...++..|++++.+... ..+.....+. .+++++.+|.+|+|||..|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~---~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAA---FTSDPKPTIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE---ECSCSSCEEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEE---EeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 012233455667789999988643 2233334455 4667899999999999877554
No 300
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.78 E-value=7.2e-05 Score=65.26 Aligned_cols=97 Identities=22% Similarity=0.116 Sum_probs=66.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc--------cccc---------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--------RLLE--------------------------------- 175 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~--------~~~~--------------------------------- 175 (290)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.+ .+..
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 589999999999999999987 488999999743 1100
Q ss_pred ----cCCh------------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc--EEeccEEEEccCCCCCc
Q 022896 176 ----FIGP------------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD--TINADCHFLCTGKPVGS 237 (290)
Q Consensus 176 ----~~~~------------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~d~vv~a~G~~~~~ 237 (290)
..+. .+...+...++..+++++.+... ..+...+.+...+|+ ++.+|.+|+|||..|..
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~---~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQ---FIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEE---EEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE---EeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0000 11112234566789999877532 234455777777774 79999999999988765
Q ss_pred h
Q 022896 238 D 238 (290)
Q Consensus 238 ~ 238 (290)
+
T Consensus 188 p 188 (519)
T 3qfa_A 188 L 188 (519)
T ss_dssp C
T ss_pred C
Confidence 4
No 301
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.78 E-value=3.7e-05 Score=66.16 Aligned_cols=92 Identities=15% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhhhhcCCcccccccccccccc--ccceEEe-eeeeeee
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVA-SPAINIT 88 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~v~~~~ 88 (290)
..+++|||+|+.|+.+|..|.+ |.+|+++++.+.+.... .+.. ...+.+.+ .+++++. ..+..+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~-------~~~~----~~~l~~~l~~~Gv~i~~~~~v~~i~ 238 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRF-------DQDM----RRGLHAAMEEKGIRILCEDIIQSVS 238 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHH----HHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc-------CHHH----HHHHHHHHHHCCCEEECCCEEEEEE
Confidence 5789999999999999999976 99999999987543110 0111 11111111 1344443 4566665
Q ss_pred cc-----eEE-ecCceEEeccEEEEccCCCCCCC
Q 022896 89 EN-----EVL-TAEGRRVVYDYLVIATGHKDPVP 116 (290)
Q Consensus 89 ~~-----~v~-~~~~~~~~~~~vi~a~G~~~~~p 116 (290)
.. .+. +.++. +.+|.+++|+|..|+.+
T Consensus 239 ~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 239 ADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp ECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred EcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 43 366 67776 99999999999987654
No 302
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.78 E-value=7.3e-05 Score=64.52 Aligned_cols=95 Identities=15% Similarity=0.152 Sum_probs=68.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc------c----------------------------ccC-----
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL------L----------------------------EFI----- 177 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~------~----------------------------~~~----- 177 (290)
.+++|||+|+.|+.+|..+.+. +.+|+++++.+.+ . ..+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5799999999999999999974 8899999987511 0 000
Q ss_pred ----C------------hhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCC
Q 022896 178 ----G------------PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVG 236 (290)
Q Consensus 178 ----~------------~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~ 236 (290)
+ ..+...+...+++.|++++.+.... .+.+.+.+...+| .++.+|.+|+|||..|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL---LAGKKVEVTAADGSSQVLDTENVILASGSKPV 155 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE---CSTTCEEEECTTSCEEEECCSCEEECCCEEEC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEcCCCceEEEEcCEEEEcCCCCCC
Confidence 0 0112223355667799999887552 4556678887777 47999999999998875
No 303
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.76 E-value=1.8e-05 Score=74.61 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=68.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCccccc---------cCChhHHHHHHHHHHhCCcEEEeCceEeec
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSRLLE---------FIGPKAGDKTRDWLISKKVDVKLGERVNLD 205 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i 205 (290)
+++|+|||+|+.|+.+|..|... +. +|+++++.+.+.. ....+......+.+++.|++++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 57899999999999999999974 66 7999998765432 12334555566788899999999987731
Q ss_pred ccCCCceeEEcCCCcEEeccEEEEccCC-CCC
Q 022896 206 SVSEGSDTYLTSTGDTINADCHFLCTGK-PVG 236 (290)
Q Consensus 206 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~-~~~ 236 (290)
. .+.+.++.++.+|.||+|||. .|.
T Consensus 264 ----~--~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ----N--EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ----T--SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ----c--eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 123334445789999999998 354
No 304
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.70 E-value=0.00014 Score=68.09 Aligned_cols=101 Identities=18% Similarity=0.077 Sum_probs=69.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------C----ChhHHHHHHHHHHhC-CcEEEeCceE
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------I----GPKAGDKTRDWLISK-KVDVKLGERV 202 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~-gi~~~~~~~v 202 (290)
..+++|||+|+.|+.+|..+.. .+.+|+++++.+.+... + ..++...+.+.+.+. +++++.++.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 4689999999999999999987 47899999987654211 1 113334455556664 9999999988
Q ss_pred eecccCCC---------ceeEEc------CCCcEEeccEEEEccCCCCCch
Q 022896 203 NLDSVSEG---------SDTYLT------STGDTINADCHFLCTGKPVGSD 238 (290)
Q Consensus 203 ~~i~~~~~---------~~~v~~------~~g~~~~~d~vv~a~G~~~~~~ 238 (290)
..+..... .+.+.. .++.++.+|.+|+|||..|..+
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 76653221 111111 1123689999999999977543
No 305
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.69 E-value=0.00049 Score=55.83 Aligned_cols=100 Identities=18% Similarity=0.147 Sum_probs=70.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------C
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------I 177 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~--------------------------------------~ 177 (290)
..+++|||+|..|+.+|..|....++.+|.++++.+..... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 34899999999999999999875458899999986543210 0
Q ss_pred ChhHHHHHHHHHHh-CCcEEEeCceEeecccCC----C--c-eeEEc------C--------CCcEEec-----------
Q 022896 178 GPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSE----G--S-DTYLT------S--------TGDTINA----------- 224 (290)
Q Consensus 178 ~~~~~~~~~~~~~~-~gi~~~~~~~v~~i~~~~----~--~-~~v~~------~--------~g~~~~~----------- 224 (290)
...+...+.+.+.+ .|++++.++.++++..++ + . ..+.. . ++.++.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 12345556666776 499999999998887663 2 2 22221 1 3357899
Q ss_pred ----cEEEEccCCCC
Q 022896 225 ----DCHFLCTGKPV 235 (290)
Q Consensus 225 ----d~vv~a~G~~~ 235 (290)
+.||.|+|...
T Consensus 225 ~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 225 SQKHGVILSTTGHDG 239 (326)
T ss_dssp STTCCEEEECCCCC-
T ss_pred cccCCEEEECcCCCc
Confidence 99999999764
No 306
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.67 E-value=0.00019 Score=62.17 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=65.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEec--------Cccccc---------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHK--------GSRLLE--------------------------------- 175 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~--------~~~~~~--------------------------------- 175 (290)
.+++|||+|+.|+.+|..+.+. .+.+|+++++ ...+..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL-HKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHH-cCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 4799999999999999999861 3889999992 222211
Q ss_pred -----cCC-hh-----------HHHHHHHHHHhC-CcEEEeCceEeecccCCCceeEEc---CCC---cEEeccEEEEcc
Q 022896 176 -----FIG-PK-----------AGDKTRDWLISK-KVDVKLGERVNLDSVSEGSDTYLT---STG---DTINADCHFLCT 231 (290)
Q Consensus 176 -----~~~-~~-----------~~~~~~~~~~~~-gi~~~~~~~v~~i~~~~~~~~v~~---~~g---~~~~~d~vv~a~ 231 (290)
..+ +. +...+.+.+++. |++++.++ ++.+ +.+.+.+.. .+| +++.+|.+|+||
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i--~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQ--DNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEE--ETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEe--eCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 000 01 112234445677 99999886 4333 334455543 356 689999999999
Q ss_pred CCCCCch
Q 022896 232 GKPVGSD 238 (290)
Q Consensus 232 G~~~~~~ 238 (290)
|..|..+
T Consensus 160 Gs~p~~p 166 (490)
T 1fec_A 160 GSWPQHL 166 (490)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9887654
No 307
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.66 E-value=0.00025 Score=61.38 Aligned_cols=97 Identities=23% Similarity=0.140 Sum_probs=66.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc--------cccc---------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--------RLLE--------------------------------- 175 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~--------~~~~--------------------------------- 175 (290)
.+++|||+|+.|+.+|..+.+ .+.+|.++++.+ .+..
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQ--LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 479999999999999999987 488999998521 1100
Q ss_pred ----cCCh------------hHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCCCCc
Q 022896 176 ----FIGP------------KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGS 237 (290)
Q Consensus 176 ----~~~~------------~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~ 237 (290)
..+. .+...+...++..+++++.+... ..+.+.+.+.+.+| .++.+|.+|+|||..|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~---~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKAS---FVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEE---ESSSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE---EccCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 0000 11112334566789999866532 23455677777777 479999999999988765
Q ss_pred h
Q 022896 238 D 238 (290)
Q Consensus 238 ~ 238 (290)
+
T Consensus 162 p 162 (488)
T 3dgz_A 162 P 162 (488)
T ss_dssp C
T ss_pred C
Confidence 4
No 308
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.65 E-value=3.5e-05 Score=68.18 Aligned_cols=56 Identities=9% Similarity=-0.102 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCC--Cc-eeEEcCCCcEEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSE--GS-DTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~--~~-~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
.+.+.+.+.++..|.++++++.|++|..++ +. ..+...+|+++.+|.||....+.|
T Consensus 379 ~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 379 ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 789999999999999999999999998766 44 344557799999999999776654
No 309
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.63 E-value=2.2e-05 Score=68.92 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCCc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~~ 47 (290)
.||+||||||.+|+.+|.+|.+ +.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999975 8999999998765
No 310
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.62 E-value=0.00015 Score=60.71 Aligned_cols=88 Identities=18% Similarity=0.216 Sum_probs=66.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc-----------------------cc-----------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-----------------------EF----------------- 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~-----------------------~~----------------- 176 (290)
.+|+|||+|..|+.+|..|..+.++.+|+++++.+.+. ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 37999999999999999999755589999999765430 00
Q ss_pred ---------------CChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCcEEeccEEEEccCCCC
Q 022896 177 ---------------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 177 ---------------~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 235 (290)
....+...+.+.+++.|++++++++|++++.. .++.+|.||.|.|..+
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 01245667788888889999999999777642 1357899999999764
No 311
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.61 E-value=3.3e-05 Score=67.14 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=32.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcc
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~ 48 (290)
.+|++|||+|++|+.+|.+|.+ +.+|+|+|++....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999999999999999976 99999999988544
No 312
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.58 E-value=5.9e-05 Score=68.20 Aligned_cols=87 Identities=20% Similarity=0.209 Sum_probs=66.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------CChhHHHHHHHHHHhC-CcEEEeCceEe
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTRDWLISK-KVDVKLGERVN 203 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-gi~~~~~~~v~ 203 (290)
.++|+|||+|+.|+.+|..|..+ +.+|+++++.+.+... ....+...+.+.+++. |++++.++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec
Confidence 47899999999999999999985 8899999987654321 1124566677778887 99999887652
Q ss_pred ecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 204 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
. .+++++.+|.+|+|+|..|.
T Consensus 469 ~------------~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 G------------DDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp H------------HHHHHTTCCEEEECCCEEEC
T ss_pred H------------HHHhhcCCCEEEEcCCCccc
Confidence 1 23346789999999998853
No 313
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.57 E-value=4.2e-05 Score=66.53 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=32.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (290)
..+|++|||+|++|+.+|.+|.+ +.+|+|+|++...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 46999999999999999999976 9999999998753
No 314
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.56 E-value=0.00024 Score=61.38 Aligned_cols=98 Identities=21% Similarity=0.151 Sum_probs=65.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc---------cc-------------------------------c
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---------LL-------------------------------E 175 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~---------~~-------------------------------~ 175 (290)
..+++|||+|+.|+.+|..+.+ .+.+|+++++.+. +. -
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVL--NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 3589999999999999999987 4889999973100 00 0
Q ss_pred ------cCCh-h-----------HHHHHHHHHHhCCcEEEeCceEeecccCCCceeEEcCCCc-EEeccEEEEccCCCCC
Q 022896 176 ------FIGP-K-----------AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD-TINADCHFLCTGKPVG 236 (290)
Q Consensus 176 ------~~~~-~-----------~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g~-~~~~d~vv~a~G~~~~ 236 (290)
..+. . +...+...++..+++++.+... ..+.+.+.+.+.+|+ ++.+|.+|+|||..|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~---~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGS---FVDSHTLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEE---EEETTEEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE---EccCCEEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 0010 0 1112234466789998876543 224455777777775 7999999999998876
Q ss_pred ch
Q 022896 237 SD 238 (290)
Q Consensus 237 ~~ 238 (290)
.+
T Consensus 164 ~p 165 (483)
T 3dgh_A 164 YP 165 (483)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 315
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.53 E-value=7e-05 Score=65.71 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=33.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCCcc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYFE 48 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~~~ 48 (290)
..+|++|||+|++|+.+|.+|.+ +.+|+|+|++....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 46999999999999999999975 79999999997654
No 316
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.45 E-value=8.1e-05 Score=65.89 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=32.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc--CCcEEEEcCCCCc
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~--g~~v~vie~~~~~ 47 (290)
..+|++|||+|++|+++|.+|.+ +.+|+|+|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999965 8999999998754
No 317
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.43 E-value=0.00069 Score=60.67 Aligned_cols=99 Identities=23% Similarity=0.347 Sum_probs=71.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------------------------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------------------------------------------ 174 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~------------------------------------------ 174 (290)
.+|+|||+|++|+-+|..|... .+.+|.++++.+...
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~-~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-TTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CcEEEECcCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999851 377888887543210
Q ss_pred ---c-------------c--------C-ChhHHHHHHHHHHhCCc--EEEeCceEeecccCCC----ceeEEcC------
Q 022896 175 ---E-------------F--------I-GPKAGDKTRDWLISKKV--DVKLGERVNLDSVSEG----SDTYLTS------ 217 (290)
Q Consensus 175 ---~-------------~--------~-~~~~~~~~~~~~~~~gi--~~~~~~~v~~i~~~~~----~~~v~~~------ 217 (290)
. . . ...+...+.+.+++.|+ ++++++++++++.+++ .+.+.+.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0 0 0 11456677788888876 9999999999987652 4566543
Q ss_pred CC--cEEeccEEEEccCCCCC
Q 022896 218 TG--DTINADCHFLCTGKPVG 236 (290)
Q Consensus 218 ~g--~~~~~d~vv~a~G~~~~ 236 (290)
+| +++.+|.||.|.|....
T Consensus 192 ~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp TTCEEEEEEEEEEECCCTTCH
T ss_pred CCCeEEEEeCEEEECCCcchH
Confidence 45 47899999999998753
No 318
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.41 E-value=0.00047 Score=61.25 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=63.6
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC-cc-------ccc-------------------------------
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG-SR-------LLE------------------------------- 175 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~-~~-------~~~------------------------------- 175 (290)
...+++|||+|+.|+.+|..+.. .+.+|+++++. +. +..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~ 183 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGW 183 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccEEEECCCccHHHHHHHHHh--CCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCc
Confidence 34689999999999999999987 48899999862 11 100
Q ss_pred cCCh--------hHHHH-----------HHHHHHhCCcEEEeCceEeecccCCCceeEEcCCC--cEEeccEEEEccCCC
Q 022896 176 FIGP--------KAGDK-----------TRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG--DTINADCHFLCTGKP 234 (290)
Q Consensus 176 ~~~~--------~~~~~-----------~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~ 234 (290)
...+ ++.+. ....++..+++++.+.. +. .+...+.+...+| .++.+|.+|+|||.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~-~~--~~~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKG-RL--ISPHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EE--EETTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEE-EE--cCCCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 0000 11111 12235567888876542 11 2233455666667 468999999999988
Q ss_pred CCch
Q 022896 235 VGSD 238 (290)
Q Consensus 235 ~~~~ 238 (290)
|..+
T Consensus 261 p~~p 264 (598)
T 2x8g_A 261 PKYP 264 (598)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 7654
No 319
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.35 E-value=0.003 Score=55.19 Aligned_cols=37 Identities=35% Similarity=0.613 Sum_probs=31.1
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhC----------CCCeEEEEecCc
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDF----------PEKKVTLVHKGS 171 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~----------~~~~v~~~~~~~ 171 (290)
...+|+|||+|..|+-+|..|.... .+.+|+++++.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 3578999999999999999998621 588999999764
No 320
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.31 E-value=0.00091 Score=57.58 Aligned_cols=54 Identities=13% Similarity=-0.024 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhCCcEEEeCceEeecccCCCce-eEE--cCCCcEEeccEEEEccCCCCC
Q 022896 181 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYL--TSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 181 ~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~-~v~--~~~g~~~~~d~vv~a~G~~~~ 236 (290)
+...+.+.+++.|++++.++.+ ++..+++.+ .+. ..+| ++.+|.||+|+|..+.
T Consensus 121 l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 121 IFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCcc
Confidence 3455666667789999999999 887665543 233 2333 5789999999998764
No 321
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.21 E-value=0.0002 Score=65.15 Aligned_cols=87 Identities=21% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccC---------C--hhHHHHHHHHHHh------CCcEEEe
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI---------G--PKAGDKTRDWLIS------KKVDVKL 198 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~------~gi~~~~ 198 (290)
.++++|||+|+.|+.+|..|.. .+.+|+++++.+.+...+ . ..+...+.+.++. .++++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~ 466 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG 466 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe
Confidence 4789999999999999999997 488999999877643211 0 1222223333332 2455543
Q ss_pred CceEeecccCCCceeEEcCCCcEEeccEEEEccCCCCC
Q 022896 199 GERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 236 (290)
Q Consensus 199 ~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 236 (290)
++. +...++..+.+|.||+|||..|.
T Consensus 467 ~~~------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 467 QKP------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp CCC------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred CeE------------EehhhccccCCCEEEEcCCCCcc
Confidence 322 22234456889999999998753
No 322
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.19 E-value=0.00039 Score=49.18 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=32.3
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+.+++|||+|..|..+|..|.+ |++|+++|+++.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3446789999999999999999975 999999999763
No 323
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.10 E-value=0.0028 Score=54.98 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=66.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC------------CCCeEEEEecCcccccc----------------------------
Q 022896 137 RSILIVGGGPTGVELAGEIAVDF------------PEKKVTLVHKGSRLLEF---------------------------- 176 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~------------~~~~v~~~~~~~~~~~~---------------------------- 176 (290)
..|+|||+|++++.+|..|.+.. ......++++.+.+...
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 46999999999999998886531 12345566665432100
Q ss_pred ---------------------C--ChhHHHHHHHHHHhCCcEEEeCceEeecccCCC--------ceeEEcCCC-----c
Q 022896 177 ---------------------I--GPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG--------SDTYLTSTG-----D 220 (290)
Q Consensus 177 ---------------------~--~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~--------~~~v~~~~g-----~ 220 (290)
+ ..++...+....++.+..+.+++.|++++..+. .+.|++.++ +
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~ 199 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS 199 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE
Confidence 0 113445555556666778999999998865332 255655433 3
Q ss_pred EEeccEEEEccCCCCCch
Q 022896 221 TINADCHFLCTGKPVGSD 238 (290)
Q Consensus 221 ~~~~d~vv~a~G~~~~~~ 238 (290)
++.++.||+|+|..|..+
T Consensus 200 ~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 200 ARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEEECCCCEECCC
T ss_pred EEEeCEEEECcCCCCCCC
Confidence 688999999999877544
No 324
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.09 E-value=0.0026 Score=57.14 Aligned_cols=34 Identities=35% Similarity=0.573 Sum_probs=25.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhh---CCCCeEEEEecC
Q 022896 137 RSILIVGGGPTGVELAGEIAVD---FPEKKVTLVHKG 170 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~---~~~~~v~~~~~~ 170 (290)
.+|+|||+|+.|+-+|..|... ..+.+|.++++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 3689999999999999888861 037788888754
No 325
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.07 E-value=0.00046 Score=49.74 Aligned_cols=36 Identities=36% Similarity=0.565 Sum_probs=31.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
....+++|||+|..|..+|..|.+ |++|+++|+++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 345789999999999999999975 999999999753
No 326
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.00 E-value=0.0058 Score=55.79 Aligned_cols=35 Identities=31% Similarity=0.592 Sum_probs=30.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
.+|+|||+|.+|+.+|..|... +.+|+++++.+.+
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~ 371 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF--GIKVTVLEAKDRI 371 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEecccce
Confidence 6899999999999999999874 7899999876543
No 327
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.81 E-value=0.0009 Score=47.26 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+.+++|+|+|..|..+|..|.+ |++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999975 99999999965
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.77 E-value=0.0011 Score=46.60 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++++|||+|..|..+|..|.+ |++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999975 99999999865
No 329
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.70 E-value=0.0011 Score=44.96 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=29.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~ 45 (290)
+++++|+|+|..|..++..|.+ | ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 4689999999999999999965 8 8999999964
No 330
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.62 E-value=0.0023 Score=45.83 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+.+++|+|+|..|...|..|.+ |++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999975 99999999964
No 331
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.54 E-value=0.0021 Score=54.16 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=31.7
Q ss_pred ccCCCCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCC
Q 022896 9 SEGKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (290)
Q Consensus 9 ~~~~~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (290)
.....++|.|||+|..|+..|..|++|++|+++|+++.
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 33446799999999999999999988999999998763
No 332
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.48 E-value=0.0034 Score=47.86 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=30.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..++|+|||||..|...|..|.+ |++|+|++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46899999999999999999976 99999999864
No 333
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.47 E-value=0.027 Score=50.11 Aligned_cols=56 Identities=9% Similarity=-0.047 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhCCcEEEeCceEeecccCCCc-eeEEc---CCCc--EEeccEEEEccCCCC
Q 022896 180 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLT---STGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 180 ~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~-~~v~~---~~g~--~~~~d~vv~a~G~~~ 235 (290)
.+...+.+.+++.|++++.++.++++..+++. ..+.. .+|+ .+.++.||+|+|-..
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 34455666667789999999999888765554 22322 4665 689999999999654
No 334
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.34 E-value=0.0065 Score=52.51 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=35.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchh
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~ 52 (290)
+||+|||||++||+||++|++ |++|+|+|+++.+|+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 799999999999999999976 999999999998886543
No 335
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.29 E-value=0.0022 Score=50.56 Aligned_cols=34 Identities=35% Similarity=0.567 Sum_probs=30.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+.|+|||||..|+..|..|.+ |++|+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46889999999999999999976 99999999864
No 336
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.27 E-value=0.0032 Score=44.30 Aligned_cols=33 Identities=36% Similarity=0.475 Sum_probs=29.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+.+++|+|+|..|..+|..|.+ |++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999975 99999999864
No 337
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.21 E-value=0.0043 Score=50.65 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=32.2
Q ss_pred ccCCCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 9 SEGKNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 9 ~~~~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
|..+.++|+|||||..|.++|..|+. |+ +|+++|.++.
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34445799999999999999999975 87 9999999864
No 338
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.19 E-value=0.0044 Score=49.93 Aligned_cols=35 Identities=37% Similarity=0.499 Sum_probs=30.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+|.|||+|..|.+.|..|.+ |++|+++|+++.
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35679999999999999999975 999999999753
No 339
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.18 E-value=0.021 Score=48.77 Aligned_cols=83 Identities=17% Similarity=0.109 Sum_probs=59.7
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeE
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY 214 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v 214 (290)
.++++.|+|.|.+|..+|..|.+ .+.+|+..+..+.. .....+.|++.|+++..+.....+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~--------~~~~~~~L~~~gi~~~~g~~~~~~~-------- 69 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFD--------ENPTAQSLLEEGIKVVCGSHPLELL-------- 69 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGG--------GCHHHHHHHHTTCEEEESCCCGGGG--------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCccc--------CChHHHHHHhCCCEEEECCChHHhh--------
Confidence 57899999999999999998887 49999998876521 1123456778899988775421000
Q ss_pred EcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 215 LTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 215 ~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
++ .+|.||+++|..+..+.+.
T Consensus 70 ---~~---~~d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 70 ---DE---DFCYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp ---GS---CEEEEEECTTSCTTSHHHH
T ss_pred ---cC---CCCEEEECCcCCCCChhHH
Confidence 00 2799999999988766554
No 340
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.17 E-value=0.013 Score=51.23 Aligned_cols=49 Identities=14% Similarity=-0.012 Sum_probs=34.7
Q ss_pred HHHHh-CCcEEEeCceEeeccc-CCC------c-eeEEc---CCCc--EEeccEEEEccCCCC
Q 022896 187 DWLIS-KKVDVKLGERVNLDSV-SEG------S-DTYLT---STGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 187 ~~~~~-~gi~~~~~~~v~~i~~-~~~------~-~~v~~---~~g~--~~~~d~vv~a~G~~~ 235 (290)
+.+++ .|++++.++.++++.. +++ . ..+.. .+|+ .+.++.||+|+|-..
T Consensus 146 ~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 146 SKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp HHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 34455 6899999999988876 333 3 23433 3565 689999999999654
No 341
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.13 E-value=0.0032 Score=53.64 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.++|+|||.|.+|+++|..|++ |++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 4689999999999999999965 999999998765
No 342
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.13 E-value=0.0047 Score=51.44 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|+|||+|.+|+.+|..|+. |.+|+++|++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5789999999999999999976 999999999874
No 343
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.11 E-value=0.0039 Score=53.28 Aligned_cols=33 Identities=39% Similarity=0.423 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++++|||.|.+|+++|..|++ |++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 5789999999999999999975 99999999965
No 344
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.06 E-value=0.0064 Score=44.92 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=29.9
Q ss_pred CCcEEEEcCChHHHHHHHHhc-c-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~-g~~v~vie~~~ 45 (290)
..+++|||+|..|..+|..|. . |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 468999999999999999996 5 99999999975
No 345
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.06 E-value=0.0049 Score=50.11 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++|+|||+|..|.+.|..|.+ |++|++++|++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 3689999999999999999976 99999999975
No 346
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.04 E-value=0.004 Score=47.49 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=29.4
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++++|||+|..|..+|..|.+ |++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 369999999999999999975 999999998653
No 347
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.012 Score=47.82 Aligned_cols=39 Identities=28% Similarity=0.473 Sum_probs=33.9
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
....|+|||+|+.|+.+|..|..++.+.+|+++++.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 456899999999999999999876679999999987654
No 348
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.02 E-value=0.0051 Score=50.78 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=31.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|+|||+|..|+.+|..|+. |.+|+++|++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999999999999999976 999999999763
No 349
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.01 E-value=0.0075 Score=49.73 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=31.8
Q ss_pred ccCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 9 SEGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 9 ~~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
|....++|.|||+|.-|.+.|..|++ |++|+++++++.
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 33345799999999999999999976 999999999753
No 350
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.93 E-value=0.028 Score=42.82 Aligned_cols=74 Identities=23% Similarity=0.356 Sum_probs=51.0
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCceeE
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY 214 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~v 214 (290)
.+++++|||+|..|...+..|... +.+|+++.+.. ...+.+..++.+++++... ..+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~----------~~~l~~l~~~~~i~~i~~~------~~~----- 86 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV----------SAEINEWEAKGQLRVKRKK------VGE----- 86 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC----------CHHHHHHHHTTSCEEECSC------CCG-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC----------CHHHHHHHHcCCcEEEECC------CCH-----
Confidence 579999999999999999999874 88999988642 1224445556667765321 111
Q ss_pred EcCCCcEEeccEEEEccCCCC
Q 022896 215 LTSTGDTINADCHFLCTGKPV 235 (290)
Q Consensus 215 ~~~~g~~~~~d~vv~a~G~~~ 235 (290)
+.--.+|.||.||+...
T Consensus 87 ----~dL~~adLVIaAT~d~~ 103 (223)
T 3dfz_A 87 ----EDLLNVFFIVVATNDQA 103 (223)
T ss_dssp ----GGSSSCSEEEECCCCTH
T ss_pred ----hHhCCCCEEEECCCCHH
Confidence 11124899999998764
No 351
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.87 E-value=0.0058 Score=49.45 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=28.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.+++.|||+|..|.+.|..|.+ |++|++++|++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 3689999999999999999976 89999999965
No 352
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.83 E-value=0.006 Score=49.28 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||||.-|...|..++. |++|+++|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4689999999999999999875 999999998763
No 353
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.83 E-value=0.0085 Score=48.07 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5789999999999999999976 999999999875
No 354
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.63 E-value=0.0092 Score=48.40 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
.++|+|||+|..|.+.|..|.. |+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999975 77 999999975
No 355
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.62 E-value=0.0087 Score=42.28 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+++|||+|..|..+|..|.. |.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 6789999999999999999975 88899999865
No 356
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.60 E-value=0.0061 Score=51.80 Aligned_cols=44 Identities=18% Similarity=0.376 Sum_probs=38.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhhhh
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR 55 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~~~ 55 (290)
..+|++|||||++|+++|..|++ |.+|+|+|+++.+|+.+....
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~ 49 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 49 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccc
Confidence 35899999999999999999976 999999999999887765443
No 357
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.59 E-value=0.0082 Score=48.12 Aligned_cols=33 Identities=33% Similarity=0.450 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+++++|||+|..|.+.|..|.+ |++|++++|+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3689999999999999999976 99999999975
No 358
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.54 E-value=0.0086 Score=48.55 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=31.8
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCC
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKE 45 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~ 45 (290)
..+.++|.|||.|..|.+.|..|.+ | ++|+++|+++
T Consensus 21 ~~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 21 QSMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp HTSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3456789999999999999999976 9 9999999975
No 359
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.53 E-value=0.011 Score=47.76 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=32.4
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3446889999999999999999975 999999999864
No 360
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.52 E-value=0.012 Score=46.82 Aligned_cols=34 Identities=35% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|.-|.+.|..|++ |++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 4689999999999999999975 999999999763
No 361
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.46 E-value=0.014 Score=47.40 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
.++|.|||+|..|.+.|..|.. |+ +|+++|+++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999975 87 9999999763
No 362
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.46 E-value=0.011 Score=49.50 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=30.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|+|||+|.+|+.+|..|+. |.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5789999999999999999975 999999999764
No 363
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.46 E-value=0.013 Score=47.32 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
.++|.|||+|..|.+.|..|++ |+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999975 88 999999976
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.45 E-value=0.011 Score=48.03 Aligned_cols=34 Identities=26% Similarity=0.188 Sum_probs=29.3
Q ss_pred CCcEEEEcCChHHHH-HHHHhc-cCCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSL-VAKSLQ-FSADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~-~A~~L~-~g~~v~vie~~~~ 46 (290)
.+++.|||.|.+|++ +|..|. +|++|++.|++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578999999999997 777775 5999999999764
No 365
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.45 E-value=0.011 Score=47.67 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++|.|||+|..|.+.|..|.+ |++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999975 99999999865
No 366
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.43 E-value=0.065 Score=43.56 Aligned_cols=81 Identities=20% Similarity=0.078 Sum_probs=57.3
Q ss_pred cCCeEEEEcCchhHHH-HHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCcee
Q 022896 135 SARSILIVGGGPTGVE-LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT 213 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~-~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~~ 213 (290)
..+++.++|-|.+|+. +|..|.+ .+.+|+..+..+.. . ..+.+++.|++++.+.....+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~~~l~~------ 64 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDAAQLDE------ 64 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCGGGGGS------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCHHHcCC------
Confidence 3578999999999997 7777776 49999998876531 1 23457778999886643211100
Q ss_pred EEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 214 YLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 214 v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
..+|.||.++|..+..+.+.
T Consensus 65 --------~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 65 --------FKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp --------CCCSEEEECTTCCTTCHHHH
T ss_pred --------CCCCEEEECCCcCCCCHHHH
Confidence 24899999999988766554
No 367
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.34 E-value=0.013 Score=49.94 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=30.2
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++|.|||+|..|+..|..|++ |++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 689999999999999999976 999999999863
No 368
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.34 E-value=0.015 Score=48.57 Aligned_cols=35 Identities=31% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+|+|||+|.+|+.+|..|+. |.+|+++|++..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46889999999999999999975 999999998764
No 369
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.28 E-value=0.014 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=29.1
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+|.|||+|..|.+.|..|.+ |++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 69999999999999999975 999999999764
No 370
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.27 E-value=0.015 Score=48.07 Aligned_cols=34 Identities=35% Similarity=0.500 Sum_probs=30.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
...+|+|+|||.+|+++|..|.. |. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 46899999999999999999975 88 999999974
No 371
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.27 E-value=0.017 Score=46.58 Aligned_cols=33 Identities=33% Similarity=0.573 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhccCCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (290)
+++++|||+|..|.+.|..|..|++|++++|++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 468999999999999999998889999999975
No 372
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.26 E-value=0.014 Score=48.22 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+++|+|||||..|..+|+.+++ |++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4789999999999999999987 999999998764
No 373
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.26 E-value=0.017 Score=43.76 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.+++.|||+|..|.+.|..|.+ |++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5789999999999999999975 999999998764
No 374
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.22 E-value=0.12 Score=46.18 Aligned_cols=54 Identities=7% Similarity=-0.106 Sum_probs=38.4
Q ss_pred HHHHHHHHHhC-Cc-EEEeCceEeecccCCC---c-eeE---EcCCCc--EEeccEEEEccCCCC
Q 022896 182 GDKTRDWLISK-KV-DVKLGERVNLDSVSEG---S-DTY---LTSTGD--TINADCHFLCTGKPV 235 (290)
Q Consensus 182 ~~~~~~~~~~~-gi-~~~~~~~v~~i~~~~~---~-~~v---~~~~g~--~~~~d~vv~a~G~~~ 235 (290)
...+.+.+++. |+ +++.++.++++..+++ . ..+ ...+|+ .+.++.||+|+|-..
T Consensus 154 ~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 154 KPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 34455556666 99 9999999998876655 4 222 235665 689999999999654
No 375
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.22 E-value=0.019 Score=44.87 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
..|+|||+|++|+.+|..|.+ .+.+|+++++.+.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~--~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCC
Confidence 369999999999999999997 48999999987654
No 376
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.20 E-value=0.018 Score=46.59 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|..|...|..|.+ |++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4789999999999999999975 999999998764
No 377
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.16 E-value=0.019 Score=46.98 Aligned_cols=31 Identities=16% Similarity=0.522 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPK 44 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~ 44 (290)
++|.|||+|..|.+.|..|.+ |++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 689999999999999999976 9999999985
No 378
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.14 E-value=0.018 Score=46.63 Aligned_cols=34 Identities=26% Similarity=0.517 Sum_probs=28.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
++.+|+|||+|..|.++|..|.. +. ++.++|.++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999975 55 899999875
No 379
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.09 E-value=0.022 Score=48.64 Aligned_cols=42 Identities=24% Similarity=0.366 Sum_probs=38.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhh
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~ 53 (290)
..+||+|||||++||+||.+|++ |++|+|+|+++.+|+....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 45899999999999999999986 9999999999999987654
No 380
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.08 E-value=0.02 Score=47.42 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=30.4
Q ss_pred ccCCCCcEEEEcCChHHHHHHHHhccCCcEEEEcCCC
Q 022896 9 SEGKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (290)
Q Consensus 9 ~~~~~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (290)
+...+++|+|+|||..|-.+|.+|++.++|++.+++.
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 4455789999999999999999999889999998764
No 381
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.07 E-value=0.018 Score=47.40 Aligned_cols=33 Identities=36% Similarity=0.404 Sum_probs=30.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPK 44 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~ 44 (290)
...+|+|+|||.+|..+|..|.. |. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46899999999999999999975 87 89999997
No 382
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.05 E-value=0.021 Score=46.51 Aligned_cols=34 Identities=35% Similarity=0.441 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
+.+|.|||||..|.+.|..|+. |+ +|+++|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 4689999999999999999975 77 8999999764
No 383
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.04 E-value=0.018 Score=49.49 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4899999999999999999976 99999999875
No 384
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.01 E-value=0.022 Score=48.17 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=31.8
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.+.+.++.|||.|..||..|..|++ |++|+.+|-++
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3456899999999999999999985 99999999775
No 385
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.01 E-value=0.022 Score=46.18 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=29.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
...+|.|||+|..|.++|..|.. ++ +++++|.++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35789999999999999999975 65 899999864
No 386
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.00 E-value=0.018 Score=47.64 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+|.|||+|..|.+.|..|.+ |++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999976 89999999875
No 387
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.97 E-value=0.021 Score=46.07 Aligned_cols=34 Identities=41% Similarity=0.546 Sum_probs=29.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
...+|.|||+|..|.++|..|.. ++ +++++|.++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 35789999999999999999975 88 999999973
No 388
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.93 E-value=0.024 Score=45.97 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
..+|.|||||..|.++|..|+. |+ +|.++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 4689999999999999999974 76 8999998763
No 389
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.93 E-value=0.022 Score=47.95 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|+|||.|..|..+|..|.+ |++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4679999999999999999975 999999999874
No 390
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.91 E-value=0.022 Score=44.34 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
..+|+|||+|-.|..+|..|.+ |. +++|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4789999999999999999987 85 8999999874
No 391
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.86 E-value=0.024 Score=45.92 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|.-|.+.|..|.+ |++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4689999999999999999975 999999999764
No 392
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.85 E-value=0.025 Score=44.84 Aligned_cols=34 Identities=9% Similarity=0.153 Sum_probs=30.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++++|+|.|||..|-.++.+|.+ |++|+++.|+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 35789999999999999999965 99999999865
No 393
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.83 E-value=0.024 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.069 Sum_probs=30.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4789999999999999999975 999999999763
No 394
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.82 E-value=0.021 Score=47.25 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=29.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+|+|+|+|.+|+.++..|+. |.+|+++|++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999975 99999999975
No 395
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.79 E-value=0.024 Score=46.73 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++|.|||+|..|...|..|.+ |++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999975 99999999865
No 396
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.74 E-value=0.02 Score=47.61 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C-------CcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S-------ADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g-------~~v~vie~~~~ 46 (290)
+++|.|||+|..|.+.|..|.+ | ++|+++++++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 4689999999999999999975 8 99999999765
No 397
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.71 E-value=0.027 Score=45.40 Aligned_cols=33 Identities=36% Similarity=0.519 Sum_probs=28.8
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
++|.|||||..|.+.|..|.. |+ ++.++|.++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~ 37 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 37 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCcc
Confidence 689999999999999999964 65 8999998753
No 398
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.70 E-value=0.029 Score=47.11 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHhccCCcEEEEcCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (290)
+|.|||+|..|+..|..|.+|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999999999999997799999999875
No 399
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.70 E-value=0.025 Score=45.60 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=29.1
Q ss_pred CcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~~ 46 (290)
++|.|||+|..|.+.|..|+. +++|+++|+++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 379999999999999999964 789999999864
No 400
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.65 E-value=0.02 Score=44.06 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=28.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+++|+|+|..|...|..|.+ |+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 5789999999999999999975 88 999998753
No 401
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.63 E-value=0.027 Score=45.35 Aligned_cols=32 Identities=34% Similarity=0.558 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
++|+|||+|..|.+.|..|+. |+ +|.++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999975 77 899999975
No 402
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.55 E-value=0.026 Score=44.92 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.1
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 579999999999999999976 999999999864
No 403
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.54 E-value=0.029 Score=46.47 Aligned_cols=33 Identities=36% Similarity=0.520 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
...|+|+|+|..|..+|..|+. |++|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999975 99999999865
No 404
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.52 E-value=0.03 Score=46.55 Aligned_cols=34 Identities=38% Similarity=0.421 Sum_probs=30.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
...+|+|||+|..|..+|..|+. |++|+++|++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35789999999999999999975 99999999865
No 405
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.50 E-value=0.024 Score=48.48 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++|+|||+|.+|...|..|.+ |++|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 5789999999999999999975 99999999864
No 406
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.44 E-value=0.033 Score=47.30 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..++.|||.|..|+..|..|++ |++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999976 999999999875
No 407
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.43 E-value=0.031 Score=44.52 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=30.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 579999999999999999975 999999999864
No 408
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.43 E-value=0.044 Score=44.11 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999975 999999999763
No 409
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.42 E-value=0.038 Score=44.00 Aligned_cols=33 Identities=18% Similarity=0.399 Sum_probs=29.8
Q ss_pred CCcEEEEcC-ChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGG-GVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGa-G~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+++|.|||+ |..|.+.|..|.+ |++|+++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999975 89999999865
No 410
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.40 E-value=0.036 Score=42.08 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.+++.|||+|..|.+.|..|.+ |++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999975 89999999864
No 411
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.40 E-value=0.034 Score=45.81 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=30.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 335799999999999999999975 999999999763
No 412
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.39 E-value=0.041 Score=47.07 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|..|...|..|.+ |++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4679999999999999999976 999999998763
No 413
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.38 E-value=0.034 Score=43.15 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=30.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..++|.|||+|..|.+.|..|.+ |++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46889999999999999999975 999999998753
No 414
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.37 E-value=0.046 Score=46.72 Aligned_cols=36 Identities=31% Similarity=0.531 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (290)
....+++|+|||-.|..+|..|.++++|.++|++..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~ 268 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQ 268 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH
T ss_pred ccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHH
Confidence 345789999999999999999988899999999764
No 415
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.37 E-value=0.034 Score=45.12 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..++|.|||.|..|...|..|.+ |++|+++|+++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 34689999999999999999975 999999999763
No 416
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.37 E-value=0.039 Score=46.60 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=31.8
Q ss_pred cCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 10 EGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 10 ~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
....++|+|+|+|..|..++..+++ |++|.++|.++.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3346789999999999999999987 999999997654
No 417
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.36 E-value=0.034 Score=45.38 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=30.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+..++.|||+|.-|.+.|..|.+ |++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35889999999999999999975 99999999974
No 418
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.32 E-value=0.038 Score=44.33 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=28.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~ 46 (290)
..+|.|||||..|.+.|+.|.. ++ ++.++|.++.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4789999999999999999864 77 8999999764
No 419
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.32 E-value=0.055 Score=43.35 Aligned_cols=35 Identities=23% Similarity=0.544 Sum_probs=30.7
Q ss_pred CCCcEEEEc-CChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIG-GGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIG-aG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+..+|.||| +|..|.+.|..|++ |++|+++++++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 346899999 99999999999976 999999998763
No 420
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.31 E-value=0.04 Score=46.82 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|.-|.+.|..|++ |++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4789999999999999999975 999999999875
No 421
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.31 E-value=0.023 Score=43.32 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEE-EcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTL-IDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~v-ie~~~~ 46 (290)
++++.|||+|..|.+.|..|.+ |++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 4789999999999999999975 999999 888754
No 422
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.27 E-value=0.035 Score=47.60 Aligned_cols=41 Identities=24% Similarity=0.409 Sum_probs=35.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCCcccchhh
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEYFEITWAS 53 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~~~~~~~~ 53 (290)
.+||+|||||++|+++|++|++ |. +|+|+|+++.+|+.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 5899999999999999999976 88 89999999988876543
No 423
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.26 E-value=0.043 Score=43.14 Aligned_cols=34 Identities=15% Similarity=0.318 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
.++++|||+|-+|-++|+.|.+ |.+|+|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999999999999999975 899999999764
No 424
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.24 E-value=0.03 Score=47.59 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=28.6
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999976 99999999875
No 425
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.19 E-value=0.043 Score=43.34 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.+.++|+|+|-+|.++|..|.+ |.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 5789999999999999999975 99999999874
No 426
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.15 E-value=0.039 Score=44.71 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=28.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..++|.|||+|..|.+.|..|++ |++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 35789999999999999999976 9999999 654
No 427
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.07 E-value=0.049 Score=44.15 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
..+|.|||+|..|.++|..|.. ++ ++.++|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4689999999999999999964 66 9999999764
No 428
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.07 E-value=0.031 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=28.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhc-c-----C-CcEEEEcC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQ-F-----S-ADVTLIDP 43 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~-~-----g-~~v~vie~ 43 (290)
.++++|.|||+|..|.+.|..|. . | ++|+++++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 33468999999999999999995 4 7 89999998
No 429
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.03 E-value=0.038 Score=44.36 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+++|.|||+|..|...|..|.+ |++|+++|+++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4689999999999999999975 999999999753
No 430
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.01 E-value=0.037 Score=44.30 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
++++.|||+|..|...|..|.+ |++|+++|+++.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3689999999999999999975 899999998753
No 431
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.00 E-value=0.043 Score=44.34 Aligned_cols=33 Identities=30% Similarity=0.356 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
+++|.|||.|..|...|..|.+ |+ +|+++|++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 5789999999999999999976 99 999999963
No 432
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.98 E-value=0.043 Score=44.65 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=27.3
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDP 43 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~ 43 (290)
+|.|||+|..|.+.|..|.+ |++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 69999999999999999976 999999999
No 433
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.98 E-value=0.056 Score=43.12 Aligned_cols=34 Identities=32% Similarity=0.457 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhccCCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (290)
+++|.|||+|.-|-..|..|+.|++|+++|+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHHcCCEEEEEECCHH
Confidence 5889999999999999988778899999999763
No 434
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.95 E-value=0.046 Score=44.04 Aligned_cols=32 Identities=34% Similarity=0.534 Sum_probs=28.7
Q ss_pred CcEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~ 45 (290)
++|.|||+|..|.+.|..|.. | .+|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 579999999999999999975 7 7899999975
No 435
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.95 E-value=0.05 Score=46.59 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=31.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhc-c-CC-cEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SA-DVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~-~-g~-~v~vie~~~~ 46 (290)
..++|.|||+|..|+..|..|+ . |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3578999999999999999995 6 89 9999999876
No 436
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.90 E-value=0.06 Score=43.11 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
.++++|||+|.+|.++|..|.+ |. +|+|++|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5789999999999999999976 87 899999974
No 437
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.90 E-value=0.052 Score=45.12 Aligned_cols=35 Identities=34% Similarity=0.532 Sum_probs=31.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..++|+|||+|..|..++..+++ |++|.++|+++.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46789999999999999999987 999999998764
No 438
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.90 E-value=0.045 Score=47.25 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=29.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~ 174 (290)
|+|+|||+|.+|+-+|..|++ .+.+|+++++.+.+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCCCC
Confidence 789999999999999999997 489999999887654
No 439
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.88 E-value=0.047 Score=44.23 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
++|.|||+|..|.+.|..|.. |+ +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 369999999999999999975 88 999999975
No 440
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.88 E-value=0.049 Score=43.69 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=30.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+++.|||+|..|..+|..|+. |++|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999975 99999999864
No 441
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.85 E-value=0.065 Score=43.41 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=29.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
...+|.|||+|..|.++|+.|+. +. ++.++|.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45799999999999999999965 65 899999865
No 442
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.82 E-value=0.051 Score=43.43 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=30.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+++.|||+|..|..+|..|+. |.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35789999999999999999975 99999999864
No 443
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.77 E-value=0.06 Score=46.25 Aligned_cols=34 Identities=29% Similarity=0.326 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|.-|.+.|..|.+ |++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4689999999999999999975 999999999864
No 444
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.74 E-value=0.06 Score=40.61 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=28.1
Q ss_pred cEEEEc-CChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 15 RVVVIG-GGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIG-aG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+++||| +|..|...|..|.+ |++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999975 89999999864
No 445
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.73 E-value=0.042 Score=43.88 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=28.6
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~ 46 (290)
++|.|||+|..|.++|..|.. ++ ++.++|.++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 379999999999999999975 66 8999998763
No 446
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.71 E-value=0.07 Score=41.69 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++++.|||+|..|...|..|.+ |++|.++++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 4689999999999999999976 89999999875
No 447
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.67 E-value=0.049 Score=43.60 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++++.|||+|..|...|..|.+ |++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999975 99999999865
No 448
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.64 E-value=0.059 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=29.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C----CcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S----ADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g----~~v~vie~~~~ 46 (290)
.++|.|||+|..|.+.|..|.+ | ++|+++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 4689999999999999999965 7 89999998763
No 449
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.59 E-value=0.054 Score=41.55 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=30.2
Q ss_pred CCCcEEEEcC-ChHHHHHHHHhc-cCCcEEEEcCCCC
Q 022896 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (290)
..++++|.|| |..|..++.+|. +|++|++++|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999998 999999999996 4999999999753
No 450
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.56 E-value=0.057 Score=41.06 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=29.7
Q ss_pred CCcEEEEcC-ChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGG-GVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGa-G~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+++|+|.|| |..|..++.+|.+ |++|++++|++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 478999996 9999999999965 999999999753
No 451
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.55 E-value=0.052 Score=45.47 Aligned_cols=34 Identities=26% Similarity=0.273 Sum_probs=30.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+.++|||.|..|..+|..|+. |.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46899999999999999999975 99999999865
No 452
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.54 E-value=0.071 Score=43.20 Aligned_cols=34 Identities=21% Similarity=0.504 Sum_probs=29.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
...+|+|||+|..|.++|+.|.. +. ++.++|.++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 35789999999999999999964 55 899999864
No 453
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.54 E-value=0.064 Score=45.78 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=30.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+.++|+|+|..|.++|..|+. |.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35889999999999999999975 99999999865
No 454
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.53 E-value=0.075 Score=42.08 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhc-cCCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (290)
+++|+|.|+|..|..++.+|. +|++|++++|+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 368999999999999999996 4999999999754
No 455
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.49 E-value=0.16 Score=43.83 Aligned_cols=61 Identities=20% Similarity=0.323 Sum_probs=45.6
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccCC------------------hhHHHHHHHHHHhCCcEE
Q 022896 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIG------------------PKAGDKTRDWLISKKVDV 196 (290)
Q Consensus 135 ~~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~gi~~ 196 (290)
...+|+|||+|.+|+.+|..|.+. +.+|+++++.+++..... ......+.+.+++.|+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 357899999999999999999974 889999998876543210 011355677788888865
Q ss_pred E
Q 022896 197 K 197 (290)
Q Consensus 197 ~ 197 (290)
.
T Consensus 110 ~ 110 (498)
T 2iid_A 110 N 110 (498)
T ss_dssp E
T ss_pred e
Confidence 3
No 456
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.48 E-value=0.26 Score=42.48 Aligned_cols=79 Identities=15% Similarity=0.181 Sum_probs=55.9
Q ss_pred hcCCeEEEEcCchhHHH-HHHHHhhhCCCCeEEEEecCccccccCChhHHHHHHHHHHhCCcEEEeCceEeecccCCCce
Q 022896 134 KSARSILIVGGGPTGVE-LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD 212 (290)
Q Consensus 134 ~~~~~v~iiG~g~~~~~-~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~v~~i~~~~~~~ 212 (290)
...+++.++|-|.+|+. +|..|.+ .+.+|+..+..+. . ..+.|++.|+++..+.....
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~--~G~~V~~~D~~~~-------~----~~~~l~~~gi~~~~g~~~~~-------- 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLAN--EGYQISGSDLAPN-------S----VTQHLTALGAQIYFHHRPEN-------- 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHH--TTCEEEEECSSCC-------H----HHHHHHHTTCEEESSCCGGG--------
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHh--CCCeEEEEECCCC-------H----HHHHHHHCCCEEECCCCHHH--------
Confidence 35689999999999996 7888886 4899998875532 1 23457788999886632210
Q ss_pred eEEcCCCcEEeccEEEEccCCCCCchhhc
Q 022896 213 TYLTSTGDTINADCHFLCTGKPVGSDWLK 241 (290)
Q Consensus 213 ~v~~~~g~~~~~d~vv~a~G~~~~~~~l~ 241 (290)
...+|.||+++|..+..+.+.
T Consensus 79 --------~~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 79 --------VLDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp --------GTTCSEEEECTTSCTTCHHHH
T ss_pred --------cCCCCEEEECCCCCCCCHHHH
Confidence 013899999999988666553
No 457
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.48 E-value=0.072 Score=43.06 Aligned_cols=33 Identities=39% Similarity=0.590 Sum_probs=28.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~ 45 (290)
..+|+|||+|..|.+.|+.|+. + .++.++|.++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4789999999999999999964 5 3899999875
No 458
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.45 E-value=0.079 Score=41.09 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC----cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA----DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~----~v~vie~~~~ 46 (290)
++++.|||+|..|.+.|..|.+ |+ +|+++|+++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 3689999999999999999975 87 9999999753
No 459
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.44 E-value=0.068 Score=43.47 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=29.5
Q ss_pred CCcEEEEcC-ChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGG-GVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGa-G~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+++|+|.|| |..|..++.+|.+ |++|++++++..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 358999996 9999999999964 999999998753
No 460
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=93.44 E-value=0.081 Score=44.08 Aligned_cols=39 Identities=26% Similarity=0.286 Sum_probs=33.3
Q ss_pred hccCCCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 8 QSEGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 8 ~~~~~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
||.++.++|+|+|+|..|...+..+++ |++|.+++..+.
T Consensus 6 pm~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 455567899999999999999999986 999999998653
No 461
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.38 E-value=0.076 Score=42.98 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
..+|.|||+|..|.++|..|.. +. ++.++|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3689999999999999999964 66 9999999764
No 462
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.37 E-value=0.02 Score=43.90 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=29.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPK 44 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~ 44 (290)
..++|.|||+|-.|-+.|..|++ |++|+.+++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 35789999999999999999976 9999999984
No 463
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.36 E-value=0.067 Score=42.28 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~~ 46 (290)
.++++|||+|-+|-++|..|.+ |. +|+|+.|+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 5789999999999999999976 87 8999998753
No 464
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.33 E-value=0.077 Score=43.33 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+|.|||.|..|-+.|..|++ |++|+++|+++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999975 99999999876
No 465
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.30 E-value=0.076 Score=42.16 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHhccCCcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (290)
++|.|||+|..|...|..|.+|++|+++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLARRFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 479999999999999999844999999998764
No 466
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.29 E-value=0.048 Score=43.08 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++++|+|+|-+|.++|..|.+ |.+|+|++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 5789999999999999999975 89999999974
No 467
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.29 E-value=0.073 Score=42.92 Aligned_cols=33 Identities=33% Similarity=0.528 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~~ 46 (290)
++|.|||+|..|.++|+.|.. +. ++.++|.++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 479999999999999999964 55 8999999773
No 468
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.28 E-value=0.07 Score=42.17 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=28.1
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
++.|||+|..|.+.|..|.+ |++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999975 89999999865
No 469
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.27 E-value=0.076 Score=44.28 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..++|+|||+|..|..+|..+++ |++|.++|.++.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 45789999999999999999986 999999998653
No 470
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.26 E-value=0.076 Score=42.04 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=28.4
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
++|.|||+|..|.+.|..|.+ |+ +|+++|+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999975 87 899999865
No 471
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.24 E-value=0.072 Score=41.66 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=28.2
Q ss_pred cEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~ 45 (290)
++.|||+|..|.+.|..|.+ | ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 68999999999999999975 8 9999999865
No 472
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.14 E-value=0.072 Score=45.83 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhcc---CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~---g~~v~vie~~~ 45 (290)
.++|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4689999999999999999964 68999999865
No 473
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.14 E-value=0.084 Score=42.49 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=29.5
Q ss_pred CCCcEEEEcCC-hHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGG-VAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG-~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
...+++|||+| +.|-.+|..|.. |.+|++++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 46899999999 679999999965 99999999864
No 474
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.12 E-value=0.079 Score=45.48 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=30.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
....|+|||+|..|..+|..|+. |++|+++|+++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46889999999999999999975 99999999865
No 475
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.10 E-value=0.075 Score=42.41 Aligned_cols=32 Identities=28% Similarity=0.203 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 15 RVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 15 dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+|.|||+|..|...|..|.+ |++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 69999999999999999965 999999999763
No 476
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.02 E-value=0.067 Score=44.87 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=27.0
Q ss_pred CcEEEEcCChHHHHHHHHhc-c-CCcEEEEcC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDP 43 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~-~-g~~v~vie~ 43 (290)
++|.|||+|..|.+.|..|+ . |++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 58999999999999999995 3 899999993
No 477
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.00 E-value=0.09 Score=41.09 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=29.5
Q ss_pred CcEEEEcCChHHHHHHHHhcc-C----CcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-S----ADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g----~~v~vie~~~~ 46 (290)
++|.|||+|..|.+.|..|.+ | ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 589999999999999999975 7 79999998764
No 478
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.98 E-value=0.083 Score=41.75 Aligned_cols=33 Identities=30% Similarity=0.374 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.++++|||+|..|-++|..|.+ |.+|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4789999999999999999975 88999999864
No 479
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.92 E-value=0.11 Score=43.01 Aligned_cols=34 Identities=32% Similarity=0.504 Sum_probs=30.3
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 138 ~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
.|+|||+|++|+-+|..|++ .+.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCC
Confidence 69999999999999999997 48999999987654
No 480
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.91 E-value=0.091 Score=44.10 Aligned_cols=34 Identities=35% Similarity=0.444 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
....++|||+|..|..+|..|+. |. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46789999999999999999975 88 899999864
No 481
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.89 E-value=0.1 Score=42.23 Aligned_cols=33 Identities=39% Similarity=0.532 Sum_probs=28.5
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C--CcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g--~~v~vie~~~ 45 (290)
..+|+|||+|..|.++|..|.. + .++.++|.++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999964 5 4899999864
No 482
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.88 E-value=0.086 Score=43.01 Aligned_cols=36 Identities=22% Similarity=0.299 Sum_probs=29.1
Q ss_pred CCCCcEEEEcC-ChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 11 GKNKRVVVIGG-GVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 11 ~~~~dvvIIGa-G~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
...+.|+|.|| |..|..++.+|.+ |++|+++++...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34688999999 9999999999964 999999998764
No 483
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.87 E-value=0.087 Score=46.33 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=31.3
Q ss_pred CcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCc
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (290)
.+++|||+|..|..+|..|.+ |++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 789999999999999999975 9999999998753
No 484
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.86 E-value=0.095 Score=42.37 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=28.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CC--cEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~--~v~vie~~~ 45 (290)
+.+|+|||||..|.++|+.|.. +. ++.++|.++
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4799999999999999999964 43 799999854
No 485
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.85 E-value=0.14 Score=44.30 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=32.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc
Q 022896 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE 175 (290)
Q Consensus 137 ~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~ 175 (290)
..|+|||+|.+|+-+|..|.++ .+.+|+++++.+++..
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSCCG
T ss_pred CCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCCcC
Confidence 4699999999999999999863 5889999998877643
No 486
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.82 E-value=0.2 Score=41.71 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=31.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 173 (290)
..+|+|||+|..|+.+|..|.+ .+.+|+++++.+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQP 40 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCC
Confidence 4689999999999999999997 48999999988654
No 487
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.81 E-value=0.11 Score=44.67 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=30.9
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
+++|.|||.|..|.+.|..|.+ |++|+++|+++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999975 999999999874
No 488
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.80 E-value=0.12 Score=46.91 Aligned_cols=34 Identities=38% Similarity=0.547 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (290)
..+|.|||+|.-|...|..|.+ |++|+++|+++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4679999999999999999976 999999999863
No 489
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.79 E-value=0.093 Score=39.59 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=27.9
Q ss_pred cEEEEcC-ChHHHHHHHHhc-cCCcEEEEcCCC
Q 022896 15 RVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (290)
Q Consensus 15 dvvIIGa-G~aGl~~A~~L~-~g~~v~vie~~~ 45 (290)
+|+|.|| |..|..++.+|. +|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 999999999996 599999999975
No 490
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.77 E-value=0.11 Score=44.64 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
+++|.|||+|.-|.+.|..|.+ |++|+++++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 5789999999999999999976 99999999975
No 491
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.74 E-value=0.1 Score=42.97 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
..+.|+|+|+|..|..+|..|.+ |++|++.|++.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~ 206 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNK 206 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45889999999999999999975 99999999753
No 492
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.73 E-value=0.23 Score=44.21 Aligned_cols=42 Identities=31% Similarity=0.563 Sum_probs=38.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCCCcccchhh
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWAS 53 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~~~~~~~~~ 53 (290)
++||++|||+|..|..+|..|++ |.+|++||+++++|+.|..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 46999999999999999999986 9999999999999988753
No 493
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.72 E-value=0.057 Score=44.38 Aligned_cols=33 Identities=33% Similarity=0.372 Sum_probs=30.0
Q ss_pred CcEEEEcCChHHHHHHHHhcc-C-------CcEEEEcCCCC
Q 022896 14 KRVVVIGGGVAGSLVAKSLQF-S-------ADVTLIDPKEY 46 (290)
Q Consensus 14 ~dvvIIGaG~aGl~~A~~L~~-g-------~~v~vie~~~~ 46 (290)
++|.|||+|..|.+.|..|.+ | ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 589999999999999999975 7 89999999875
No 494
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.69 E-value=0.11 Score=42.20 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=29.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHhc-cCC--cEEEEcCCC
Q 022896 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (290)
Q Consensus 11 ~~~~dvvIIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (290)
....+|.|||+|..|.++|+.|. ++. ++.++|.+.
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 34689999999999999999986 465 899999864
No 495
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.68 E-value=0.11 Score=41.21 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=29.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhcc-CC-cEEEEcCCC
Q 022896 12 KNKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (290)
..++++|+|+|-+|-++|..|.+ |. +|+|++|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35789999999999999999975 87 699999875
No 496
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.65 E-value=0.21 Score=44.18 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 022896 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (290)
Q Consensus 136 ~~~v~iiG~g~~~~~~a~~l~~~~~~~~v~~~~~~~~ 172 (290)
..+|+|||+|..|+-+|..|+. .+.+|+++++.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCC
Confidence 4799999999999999999987 4889999998753
No 497
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.63 E-value=0.091 Score=45.02 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhc-c--CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~-~--g~~v~vie~~~ 45 (290)
+++|.|||+|..|+..|..|+ . |++|+++|+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 368999999999999999996 4 69999999875
No 498
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.63 E-value=0.11 Score=42.24 Aligned_cols=34 Identities=26% Similarity=0.552 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-C-CcEEEEcCCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEY 46 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g-~~v~vie~~~~ 46 (290)
..+|+|||+|-.|..+|.+|.+ | .+++++|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 6899999999999999999986 6 58999998764
No 499
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=92.62 E-value=0.11 Score=43.05 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.5
Q ss_pred CCCcEEEEcC-ChHHHHHHHHhcc-CC---cEEEEcCCC
Q 022896 12 KNKRVVVIGG-GVAGSLVAKSLQF-SA---DVTLIDPKE 45 (290)
Q Consensus 12 ~~~dvvIIGa-G~aGl~~A~~L~~-g~---~v~vie~~~ 45 (290)
...+|+|||| |.+|+.|+..+.. |. +|+++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 3679999999 9999999999976 97 999999865
No 500
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.61 E-value=0.13 Score=41.00 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=28.6
Q ss_pred CCcEEEEcCChHHHHHHHHhcc-CCcEEEEcCCC
Q 022896 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (290)
Q Consensus 13 ~~dvvIIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (290)
.+.++|+|+|-.|.++|..|.+ | +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 4789999999999999999976 9 999999864
Done!