BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022898
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225441425|ref|XP_002279071.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
isoform 1 [Vitis vinifera]
Length = 297
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/298 (74%), Positives = 247/298 (82%), Gaps = 9/298 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR +P +NANG FKKSK E ES G+GSKSKPCTKFFST+GCPFGESCHFLHY
Sbjct: 1 MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMA-VPPPASNGPTV--VKSRMCNRLNSAEGCKFGDK 114
PGGYNAVAQM N +P SRNMA PPP NG ++ VKS+MCN+ N+AEGCKFGDK
Sbjct: 61 VPGGYNAVAQMTNQAPILPPASRNMAGPPPPVPNGSSMPAVKSKMCNKFNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
CHFAHGEWELGKP+A HDDPRA G++PGR+ GR EP P GPAASFGASATAKISVDAS
Sbjct: 121 CHFAHGEWELGKPLAPYHDDPRAMGSIPGRLAGRIEPSPT-GPAASFGASATAKISVDAS 179
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGGVNSKQICRQTGAKLSIR+H++DPNLRNIELEG+FEQIK+ASAMVRELIV
Sbjct: 180 LAGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIKEASAMVRELIVN 239
Query: 235 IG--PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
I P HA+ A G P +SN+KTKLC NF KGSCTFG+RCHFAHGA ELRK+AI
Sbjct: 240 ISAMPGHARTTAMPGGGQAPPASNYKTKLCDNFTKGSCTFGERCHFAHGAGELRKSAI 297
>gi|255585533|ref|XP_002533457.1| conserved hypothetical protein [Ricinus communis]
gi|223526690|gb|EEF28926.1| conserved hypothetical protein [Ricinus communis]
Length = 295
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/298 (75%), Positives = 241/298 (80%), Gaps = 12/298 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR + + NANG FKKSK E +S GVGSKSKPCTKFFSTAGCPFGESCHFLHY
Sbjct: 2 MDTRKRGRND--FNANGGFKKSKREMDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFLHY 59
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVAQMMNL AV + RNM P PA + P+ VKSRMCN+ N+ EGCKFGDK
Sbjct: 60 VPGGYNAVAQMMNLGPAVTSVPRNMPAPSPAIPNGSAPSAVKSRMCNKYNTVEGCKFGDK 119
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
C+FAHGEWELGK +A SHDDPRAFG GRMGGR EPPP PGPAASFGASATAKISV+AS
Sbjct: 120 CNFAHGEWELGKSMAPSHDDPRAFGTFAGRMGGRMEPPP-PGPAASFGASATAKISVEAS 178
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGGVNSKQICRQTGAKLSIR+HE DPNLRNIE EGSFEQIKQASAMV ELI
Sbjct: 179 LAGAIIGKGGVNSKQICRQTGAKLSIREHETDPNLRNIEFEGSFEQIKQASAMVSELIAS 238
Query: 235 IGPAHAKNPAT--AGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
I +A AT G HP SNFKTKLC NF+KGSCTFG RCHFAHGAAELRK+ +
Sbjct: 239 ISSVNASAKATGLTGGHGHP-GSNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295
>gi|255585535|ref|XP_002533458.1| conserved hypothetical protein [Ricinus communis]
gi|223526691|gb|EEF28927.1| conserved hypothetical protein [Ricinus communis]
Length = 295
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/298 (74%), Positives = 242/298 (81%), Gaps = 12/298 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR + + N NG FKKS+ E +S GVGSKSKPCTKFFSTAGCPFGESCHFLHY
Sbjct: 2 MDIRKRGRND--FNVNGGFKKSRKEMDSFSTGVGSKSKPCTKFFSTAGCPFGESCHFLHY 59
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVAQMMNL AV + RNM P PA + P+ VKSR+CN+ N+AEGCKFGDK
Sbjct: 60 VPGGYNAVAQMMNLGPAVTSIPRNMPAPSPAIPNGSAPSAVKSRLCNKYNTAEGCKFGDK 119
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
C+FAHGEWELGKP+ SHDDPRAFG +PGRMGGR EPPP PG AASFGASATAKISV+AS
Sbjct: 120 CNFAHGEWELGKPVVPSHDDPRAFGTIPGRMGGRMEPPP-PGSAASFGASATAKISVEAS 178
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGGVNSKQICRQTGAKLSIR+HE DPN+RNIE EGSFEQIKQASAMV ELI
Sbjct: 179 LAGAIIGKGGVNSKQICRQTGAKLSIREHETDPNVRNIEFEGSFEQIKQASAMVSELIAS 238
Query: 235 IGPAHAKNPATA--GSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
I A+A AT G HP SNFKTKLC NF+KGSCTFG RCHFAHGAAELRK+ +
Sbjct: 239 ISSANASAKATGLIGGHGHP-GSNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295
>gi|449457299|ref|XP_004146386.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
gi|449480828|ref|XP_004156007.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 305
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/308 (70%), Positives = 241/308 (78%), Gaps = 21/308 (6%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES--GVGSKSKPCTKFFSTAGCPFGESCHFLHYF 58
MD RKR +PE N+NG FKK K E ES VGSKSKPCTKFFSTAGCPFGESCHFLHY
Sbjct: 1 MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
Query: 59 PGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG----PTVVKSRMCNRLNSAEGCKFGDK 114
PGGYN VAQMMNL PSRN+A PP +NG P+ VK+RMCN+ N+AEGCKFGDK
Sbjct: 61 PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGA---------VPGRMGGRYEPPPAPGPAASFGASA 165
C+FAHGEWELG+P SHD+PRA G + GRMGGR + PP PGPAASFGASA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPP-PGPAASFGASA 179
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKLSIRDHE+DPNLRNIELEG+FEQI +AS
Sbjct: 180 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 239
Query: 226 AMVRELIVRI---GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGA 282
AMVRELI+ + GP A G A P SN+KTKLC NFAKGSCTFG+RCHFAHGA
Sbjct: 240 AMVRELIITVSMAGPGKASGGMGGGPA--PTGSNYKTKLCDNFAKGSCTFGERCHFAHGA 297
Query: 283 AELRKTAI 290
AELRK+ +
Sbjct: 298 AELRKSGV 305
>gi|449437587|ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 296
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/299 (72%), Positives = 241/299 (80%), Gaps = 12/299 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESE---SGVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR + E G+ ANG KK+K + E +GV SKSKPCTKF+ST GCPFGE+CHFLHY
Sbjct: 1 MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNM-AVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDK 114
PGGYNAVAQMMNLP A PAP RNM A PPP SNG VKSRMCN+ NSAEGCKFGDK
Sbjct: 61 VPGGYNAVAQMMNLPPAPPAP-RNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 119
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
CHFAH EWELGKP A SHDDPR+ G +P R+ R + P PG AASFGAS+TAKISVDAS
Sbjct: 120 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGP-PGLAASFGASSTAKISVDAS 178
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGG+NSKQICR+TGAKLSIRDHE+DPNLRNIELEGSF+QIK+ASAMV+ELIV
Sbjct: 179 LAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVT 238
Query: 235 I---GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+ GP + G A P +NFKTKLC NFAKGSCTFG+RCHFAHGAAELRK+ +
Sbjct: 239 VSMAGPPKSAT-GATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296
>gi|363807948|ref|NP_001242454.1| uncharacterized protein LOC100803981 [Glycine max]
gi|255636900|gb|ACU18783.1| unknown [Glycine max]
Length = 295
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/298 (72%), Positives = 236/298 (79%), Gaps = 11/298 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR +PE G + NG FKKSK E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDTRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDKC 115
PGGYNAVA MMNL A P SRN+A PPP NG P VK+R+CN+ N+AEGCKFGDKC
Sbjct: 61 VPGGYNAVAHMMNLTPAAPPASRNVAAPPPVPNGSAPPAVKTRICNKFNTAEGCKFGDKC 120
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAV-PGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
HFAHGEWELGK IA S DD R G GR+ GR EPPP GPAASFGA+ATAKISV+AS
Sbjct: 121 HFAHGEWELGKHIAPSFDDHRTMGPTGVGRLAGRMEPPP--GPAASFGANATAKISVEAS 178
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPNLRNIELEGSF QIK+AS MV++L++
Sbjct: 179 LAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFVQIKEASNMVKDLLLT 238
Query: 235 IGPAHAKNPATAGSAAHPLS--SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+ A T G P S SNFKTKLC NF KGSCTFGDRCHFAHGAAELRK+ +
Sbjct: 239 L-QMSAPPKTTPGVPGAPASHGSNFKTKLCENFTKGSCTFGDRCHFAHGAAELRKSGV 295
>gi|356504857|ref|XP_003521211.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Glycine max]
Length = 295
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 237/299 (79%), Gaps = 13/299 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +PE G + NG FKKSK E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDIRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAP-SRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVA MMNL A P P +RN+A P NG P+ VK+R+CN+ N+AEGCKFGDK
Sbjct: 61 VPGGYNAVAHMMNLTPAAPLPPTRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAV-PGRMGGRYEPPPAPGPAASFGASATAKISVDA 173
CHFAHGEWELGK IA S DD RA G GR+ GR EPP GPAASFGA++TAKISV+A
Sbjct: 121 CHFAHGEWELGKHIAPSFDDHRAMGPPGAGRLAGRMEPP---GPAASFGANSTAKISVEA 177
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
SLAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPNLRNIELEGSFEQIK+AS MV++L++
Sbjct: 178 SLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKDLLL 237
Query: 234 RIGPAHAKNPATAGSAAHPLS--SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+ A T G P S SNFKTKLC NFAKGSCTFGDRCHFAHGA+ELRK+ +
Sbjct: 238 TL-QMSAPPKTTPGVPGAPASHGSNFKTKLCENFAKGSCTFGDRCHFAHGASELRKSGV 295
>gi|356504859|ref|XP_003521212.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Glycine max]
Length = 295
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 237/299 (79%), Gaps = 13/299 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR + ETG + NG FK+SK E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDIRKRGRHETGFSLNGGFKRSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60
Query: 58 FPGGYNAVAQMMNL-PQAVPAPSRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVA MMNL P A P PSRN+A P NG P+ VK+R+CN+ N+AEGCKFGDK
Sbjct: 61 VPGGYNAVAHMMNLTPAAPPPPSRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAV-PGRMGGRYEPPPAPGPAASFGASATAKISVDA 173
CHFAHGEWELGK IA S DD A G GR+ GR EPP GPAASFGA++TAKISV+A
Sbjct: 121 CHFAHGEWELGKHIAPSFDDHHAMGPPGAGRLAGRMEPP---GPAASFGANSTAKISVEA 177
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
SLAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPNLRNIELEGSFEQIK+AS MV++L++
Sbjct: 178 SLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKDLLL 237
Query: 234 RIGPAHAKNPATAGSAAHPLS--SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+ A T G P S SNFKTKLC NFAKGSCTFGDRCHFAHGA+ELRK+ +
Sbjct: 238 TL-QMSAPPKTTPGVPGAPASHGSNFKTKLCENFAKGSCTFGDRCHFAHGASELRKSGV 295
>gi|255634442|gb|ACU17586.1| unknown [Glycine max]
Length = 295
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/299 (70%), Positives = 236/299 (78%), Gaps = 13/299 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +PE G + NG FKKSK E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDIRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAP-SRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVA MMNL A P P +RN+A P NG P+ VK+R+CN+ N+AEGCKFGDK
Sbjct: 61 VPGGYNAVAHMMNLTPAAPLPPTRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAV-PGRMGGRYEPPPAPGPAASFGASATAKISVDA 173
CHFAHGEWELGK IA S DD RA G GR+ GR EPP GPAASFGA++TAKISV+A
Sbjct: 121 CHFAHGEWELGKHIAPSFDDHRAMGPPGAGRLAGRMEPP---GPAASFGANSTAKISVEA 177
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
SLAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPN RNIELEGSFEQIK+AS MV++L++
Sbjct: 178 SLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNFRNIELEGSFEQIKEASNMVKDLLL 237
Query: 234 RIGPAHAKNPATAGSAAHPLS--SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+ A T G P S SNFKTKLC NFAKGSCTFGDRCHFAHGA+ELRK+ +
Sbjct: 238 TL-QMSAPPKTTPGVPGAPASHGSNFKTKLCENFAKGSCTFGDRCHFAHGASELRKSGV 295
>gi|224139806|ref|XP_002323285.1| predicted protein [Populus trichocarpa]
gi|222867915|gb|EEF05046.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 231/294 (78%), Gaps = 14/294 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR +P+ G N G FKKSK E +S GVGSKSKPCTKFFSTAGCPFGESCHFLH+
Sbjct: 2 MDTRKRGRPDFGTNGYGGFKKSKQEMDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFLHH 61
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHF 117
PGGY AVAQM+NL V P P P S+ P+ VKSR+C + NSAEGCKFGDKCHF
Sbjct: 62 VPGGYKAVAQMVNLGPTVALP------PVPNSSAPSAVKSRLCKKYNSAEGCKFGDKCHF 115
Query: 118 AHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASA-TAKISVDASLA 176
AHGEWELGK SH+DP A G+VPGR+GGR EPPP PGPA SFG A T +ISVDASLA
Sbjct: 116 AHGEWELGKAFVPSHNDPHAAGSVPGRLGGRVEPPP-PGPATSFGVFATTTRISVDASLA 174
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
G+IIGK GV+SKQICRQTG KLSI+DHE +PNL+NIELEGS EQI QAS MV EL VR+
Sbjct: 175 GSIIGKAGVHSKQICRQTGIKLSIKDHETNPNLKNIELEGSLEQIAQASKMVEEL-VRVT 233
Query: 237 PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
A+A ++ G A+P SN+KTKLC NFAKGSCTFG RCHFAHGAAELRK+++
Sbjct: 234 SANAAAKSSGGH-ANP-GSNYKTKLCDNFAKGSCTFGQRCHFAHGAAELRKSSM 285
>gi|449526573|ref|XP_004170288.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 271
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/269 (74%), Positives = 222/269 (82%), Gaps = 9/269 (3%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNM-AVPP 86
+GV SKSKPCTKF+ST GCPFGE+CHFLHY PGGYNAVAQMMNLP A PAP RNM A PP
Sbjct: 6 TGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAP-RNMGAPPP 64
Query: 87 PASNGPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGR 144
P SNG VKSRMCN+ NSAEGCKFGDKCHFAH EWELGKP A SHDDPR+ G +P R
Sbjct: 65 PMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIPNR 124
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
+ R + P PG AASFGAS+TAKISVDASLAGAIIGKGG+NSKQICR+TGAKLSIRDHE
Sbjct: 125 LASRMDAGP-PGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHE 183
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELIVRI---GPAHAKNPATAGSAAHPLSSNFKTKL 261
+DPNLRNIELEGSF+QIK+ASAMV+ELIV + GP + G A P +NFKTKL
Sbjct: 184 SDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSAT-GATGGTAGPAGNNFKTKL 242
Query: 262 CGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
C NFAKGSCTFG+RCHFAHGAAELRK+ +
Sbjct: 243 CDNFAKGSCTFGERCHFAHGAAELRKSGV 271
>gi|363807168|ref|NP_001242091.1| uncharacterized protein LOC100817463 [Glycine max]
gi|255636598|gb|ACU18637.1| unknown [Glycine max]
Length = 295
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/300 (69%), Positives = 232/300 (77%), Gaps = 15/300 (5%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +P+ +N NG KK+K E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDVRKRGRPD--VNLNGAVKKTKQELESLSSGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 58
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDKC 115
PGGYN VA MMNL A P P R +A PPP NG P+ VK+R+CN+ N+AEGCKFGDKC
Sbjct: 59 VPGGYNVVAHMMNLKPAAPPP-RTVAAPPPIPNGSAPSAVKTRICNKFNTAEGCKFGDKC 117
Query: 116 HFAHGEWELGKPIAISHDDP---RAFGA-VPGRMGGRYEPPPAPGPAASFGASATAKISV 171
HFAHGEWELGKPIA S DD R G GRM GR EPPPA A SFGA +TAKISV
Sbjct: 118 HFAHGEWELGKPIAPSIDDHHHHRPLGPPAGGRMAGRIEPPPAM--AGSFGAISTAKISV 175
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
+ASLAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPNLRNIELEG+FEQIK+AS MV++L
Sbjct: 176 EASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASNMVKDL 235
Query: 232 IVRIG-PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
++ + A K+ A P SNFKTKLC NF KGSCTFG+RCHFAHGAAELRK+ +
Sbjct: 236 LLTVSMSAPPKSTPGVPGAPAPPGSNFKTKLCENFPKGSCTFGERCHFAHGAAELRKSGV 295
>gi|388515913|gb|AFK46018.1| unknown [Lotus japonicus]
Length = 296
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/298 (69%), Positives = 232/298 (77%), Gaps = 13/298 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +PE G N+NG KKSK E ES GVGSKSKPCTKFFSTAGCPFGESCHFLH
Sbjct: 1 MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHN 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDKC 115
PGGYNAVA MMNL + AP RN+A PPP + VK+R+CN+ N+AEGCKFGDKC
Sbjct: 61 VPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPAVKTRICNKFNTAEGCKFGDKC 120
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVP-GRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
HFAHGEWELGK IA S DD R G P GR+GGR EPPP GPA FGA+ATAKISV+AS
Sbjct: 121 HFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPP--GPATGFGANATAKISVEAS 178
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGGVNSKQICRQTGAKLSIR+HE+DPNLRNIELEGSF+QIK+AS MV++L++
Sbjct: 179 LAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFDQIKEASNMVKDLLLT 238
Query: 235 IG-----PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+ ++ G H S+NFKTKLC NFAKG+CTFG+RCHFAHG AELRK
Sbjct: 239 LQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCENFAKGTCTFGERCHFAHGPAELRK 296
>gi|357509931|ref|XP_003625254.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355500269|gb|AES81472.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 301
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/305 (66%), Positives = 229/305 (75%), Gaps = 22/305 (7%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +PE G N NG FKKS+HE ES GVGSKSKPCTKFFST+GCPFGESCHFLH+
Sbjct: 1 MDMRKRGRPEHGFNNNGGFKKSRHEMESLSTGVGSKSKPCTKFFSTSGCPFGESCHFLHH 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVP----PPASNGPTVVKSRMCNRLNSAEGCKFGD 113
PGGYNAV+QMMNL A P RN+ P P + P+ VKSR+C++ N+AEGCKFGD
Sbjct: 61 VPGGYNAVSQMMNLTPAAPPAPRNVPAPRNAHAPNGSAPSAVKSRICSKFNTAEGCKFGD 120
Query: 114 KCHFAHGEWELGKPIAIS-----HDDPRAFG-AVPGRMGG-RYEPPPAPGPAASFGASAT 166
KCHFAHGEWELGKP+A S H+D R G GR GG R EPPP P ASFGA+AT
Sbjct: 121 KCHFAHGEWELGKPVAPSFDDHRHNDHRHMGPPNAGRFGGHRMEPPPVP---ASFGANAT 177
Query: 167 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASA 226
AKISV+ASLAGAIIGKGGVNSKQICRQTGAKL+IR+HE DPNL+NIEL G+FEQIK AS
Sbjct: 178 AKISVEASLAGAIIGKGGVNSKQICRQTGAKLAIREHE-DPNLKNIELVGTFEQIKDASN 236
Query: 227 MVRELIVRIG----PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGA 282
MV++L++ + P + P A +N KTKLC NFAKGSCTFGDRCHFAHGA
Sbjct: 237 MVKDLLLTLQMSAPPKSNQGPPGHHGAPGHHGNNLKTKLCENFAKGSCTFGDRCHFAHGA 296
Query: 283 AELRK 287
ELRK
Sbjct: 297 VELRK 301
>gi|225450321|ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
vinifera]
gi|147768909|emb|CAN75883.1| hypothetical protein VITISV_024456 [Vitis vinifera]
Length = 296
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/292 (66%), Positives = 226/292 (77%), Gaps = 12/292 (4%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
++R +P+ NG FKKSK E+ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 6 KRRGRPDGAAFGNGGFKKSKQETESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 65
Query: 61 GYNAVAQMMNL--PQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
GY+AV QM NL A+P +RN PP +GP VK+R+CN+ N+ EGCKFGDKCHFA
Sbjct: 66 GYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPTVKTRICNKFNTPEGCKFGDKCHFA 125
Query: 119 HGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATA-KISVDASLAG 177
HGE ELG+PI +H+DPRA G + GR+ GR E PP AA+ ++ KISVDASLAG
Sbjct: 126 HGELELGRPIVPTHEDPRAMGPMGGRLAGRLEAPPPGLAAAASFGASATAKISVDASLAG 185
Query: 178 AIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 237
AIIGKGGVNSKQICR TG KLSI++HE+DPN RNIELEG+F+QIKQASAMVRELI IG
Sbjct: 186 AIIGKGGVNSKQICRLTGVKLSIKEHESDPNQRNIELEGTFDQIKQASAMVRELIFNIGS 245
Query: 238 A--HAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
A HAKNP GSAA ++NFKTK+C NFAKGSCTFGDRCHFAHGA ELRK
Sbjct: 246 AAGHAKNP--TGSAAS--ANNFKTKMCDNFAKGSCTFGDRCHFAHGANELRK 293
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC+ N A+G C FGD+CHFAHG EL KP+A
Sbjct: 264 KTKMCD--NFAKGSCTFGDRCHFAHGANELRKPVA 296
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 258 KTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
KT++C F C FGD+CHFAHG EL + +
Sbjct: 103 KTRICNKFNTPEGCKFGDKCHFAHGELELGRPIV 136
>gi|224057168|ref|XP_002299153.1| predicted protein [Populus trichocarpa]
gi|222846411|gb|EEE83958.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/299 (63%), Positives = 220/299 (73%), Gaps = 14/299 (4%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKRT+ + N NG KK++ E ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 8 RKRTRNDAAFNGNGGHKKNRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 67
Query: 61 GYNAVAQMMNL--PQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDKC 115
G+ AV+QM+N+ A+P SRN VP + + P VKSR+CN+ N+ EGCKFGDKC
Sbjct: 68 GFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEGCKFGDKC 127
Query: 116 HFAHGEWELGKPIAI-SHDDPRAFGAVPGRMGGRYEPP-PAPGPAASFGASATAKISVDA 173
HFAHGEWELGK A S++DPRA G +PGRM E P G AASFG+SAT KIS+DA
Sbjct: 128 HFAHGEWELGKASAAPSYEDPRAMGPIPGRMSRHMEHPHQGHGAAASFGSSATTKISIDA 187
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
SLAGAIIGK GVNSK ICR TGAKLSIRDHEADP R+IELEGSF+QI QAS MVR+LI
Sbjct: 188 SLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFDQISQASDMVRQLIS 247
Query: 234 RIGPAHAKNPATAGSAAHPL--SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
+G A P A H S+NFKTK+C NF KGSCTFGDRCHFAHGA ELRK+ +
Sbjct: 248 NVG--QASGPPIKNQAMHSSGGSNNFKTKICENFNKGSCTFGDRCHFAHGAEELRKSGM 304
>gi|224076054|ref|XP_002304891.1| predicted protein [Populus trichocarpa]
gi|222842323|gb|EEE79870.1| predicted protein [Populus trichocarpa]
Length = 315
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/313 (61%), Positives = 220/313 (70%), Gaps = 31/313 (9%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR + + N NG KK++ E ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 8 RKRGRLDAAFNGNGGHKKTRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 67
Query: 61 GYNAVAQMMNLPQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDKCHF 117
GY AV+QM LP A+P SRN PPP+ + P VKSR+CN+ N+ EGCKFGDKCHF
Sbjct: 68 GYKAVSQM--LP-ALPPASRNQGAPPPSFPDRSSPPSVKSRLCNKYNTVEGCKFGDKCHF 124
Query: 118 AHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP------------------AA 159
AHGEWELGK A S+DDPRA G + GR Y+ P A GP AA
Sbjct: 125 AHGEWELGKASAASYDDPRAMGPMQGRAAAPYDDPRAMGPMQGRMSRHMEHPHQGHGAAA 184
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFE 219
SFG+SAT KIS+DASLAGAIIGK GVNSK ICR TGAKLSIR+HE DP RNIELEGSF+
Sbjct: 185 SFGSSATTKISIDASLAGAIIGKNGVNSKHICRATGAKLSIREHETDPKKRNIELEGSFD 244
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAAHPL--SSNFKTKLCGNFAKGSCTFGDRCH 277
QI QAS MVR+LI +G A P S+ H S+NFKTK+C NF KGSCTFGDRCH
Sbjct: 245 QISQASDMVRQLISNVG--QASGPPMKNSSMHSSGGSNNFKTKICENFNKGSCTFGDRCH 302
Query: 278 FAHGAAELRKTAI 290
FAHGA ELRK+ +
Sbjct: 303 FAHGAEELRKSGM 315
>gi|225435608|ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Vitis vinifera]
Length = 301
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 226/298 (75%), Gaps = 17/298 (5%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR + E +N NG FKKSK E ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 7 RKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 66
Query: 61 GYNAVAQMMNLPQAVPA--PSRNMAVPP--PASNGPTVVKSRMCNRLNSAEGCKFGDKCH 116
G AV+QM+NL P P+RN AVPP P + P VK+R+CN+ NSAEGCKFGDKCH
Sbjct: 67 GIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCKFGDKCH 126
Query: 117 FAHGEWELGKPIAISH-DDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATA-KISVDAS 174
FAHGEWELGKP SH +D R G+ GR+ GR EPPP AA+ ++ KISVDAS
Sbjct: 127 FAHGEWELGKPTLPSHHEDHRGMGS--GRLAGRLEPPPPGLAAAASFGASATAKISVDAS 184
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGK GVNSKQICR TGAKLSI+DH++DPNLRNIELEG+F+QIKQASAMVRELIV
Sbjct: 185 LAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQASAMVRELIVN 244
Query: 235 IGPAHA---KNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
I A +NPA SAA ++NFKTKLC NF KGSCTFG+RCHFAHGA ELRK A
Sbjct: 245 ISSASGPPMRNPAMQASAA---ANNFKTKLCENFTKGSCTFGERCHFAHGADELRKPA 299
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 258 KTKLCGNFAKGS-CTFGDRCHFAHGAAELRKTAI 290
KT+LC + C FGD+CHFAHG EL K +
Sbjct: 106 KTRLCNKYNSAEGCKFGDKCHFAHGEWELGKPTL 139
>gi|358248424|ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
gi|255636715|gb|ACU18693.1| unknown [Glycine max]
Length = 297
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 231/299 (77%), Gaps = 11/299 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR +PE N NG KKS+ E++S G+GSKSKPCTKFFST+GCPFGE CHFLHY
Sbjct: 1 MD-RKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHY 59
Query: 58 FPGGYNAVAQMMNLPQ--AVPAPSRNMAVPP--PASNGPTVVKSRMCNRLNSAEGCKFGD 113
PGG+ AV+Q++N+ P RN VPP P + P VVK+R+CN+ N+AEGCKFGD
Sbjct: 60 VPGGFKAVSQLINVGSNPVTPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGD 118
Query: 114 KCHFAHGEWELGKPIAISHDDPRAFGAVPG-RMGGRYEPP-PAPGPAASFGASATAKISV 171
KCHFAHGEWELG+P A S++DPR G +P R+GGR EPP PA G AASFGASATAKIS+
Sbjct: 119 KCHFAHGEWELGRPTAPSYEDPRVLGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISI 178
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
+ASLAGA+IGK GVNSKQICR TGAKLSIRDH+ DPNLRNIELEGSF+QIKQASAMV E+
Sbjct: 179 NASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEV 238
Query: 232 IVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
I+ + A + S +SNFKTKLC NFAKGSCTFG+RCHFAHG ELRK+ +
Sbjct: 239 ILNVSSASGPPMKSFTSQTSAPTSNFKTKLCENFAKGSCTFGERCHFAHGTDELRKSGM 297
>gi|356536568|ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Glycine max]
Length = 297
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 230/299 (76%), Gaps = 11/299 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR + E N NG KKS+ E +S G+GSKSKPCTKFFST+GCPFGE CHFLHY
Sbjct: 1 MD-RKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHY 59
Query: 58 FPGGYNAVAQMMNLPQ--AVPAPSRNMAVPP--PASNGPTVVKSRMCNRLNSAEGCKFGD 113
PGG+ AV+Q++N+ +P RN VPP P + P VVK+R+CN+ N+AEGCKFGD
Sbjct: 60 VPGGFKAVSQLINVGSNPVIPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGD 118
Query: 114 KCHFAHGEWELGKPIAISHDDPRAFGAVPG-RMGGRYEPP-PAPGPAASFGASATAKISV 171
KCHFAHGEWELG+P A S++DPR G +P R+GGR EPP PA G AASFGASATAKIS+
Sbjct: 119 KCHFAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISI 178
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
+ASLAGA+IGK GVNSKQICR TGAKLSIRDH+ DPNLRNIELEGSF+QIKQASAMV E+
Sbjct: 179 NASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEV 238
Query: 232 IVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
I+ + A + S +SNFKTKLC NFAKGSCTFG+RCHFAHG ELRK+ +
Sbjct: 239 ILNVSSASGPPMKSFTSQNSAPASNFKTKLCENFAKGSCTFGERCHFAHGNDELRKSGM 297
>gi|75228574|sp|Q7F8R0.1|C3H14_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 14;
Short=OsC3H14
gi|46389843|dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group]
gi|125538455|gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group]
gi|125581141|gb|EAZ22072.1| hypothetical protein OsJ_05736 [Oryza sativa Japonica Group]
gi|215769037|dbj|BAH01266.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/297 (63%), Positives = 209/297 (70%), Gaps = 15/297 (5%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR KP+ ANG K ESES GVGSKSKPCTKFFST+GCPFGE CHFLH+FPG
Sbjct: 6 RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 62
Query: 61 GYNAVAQMMNL--PQAVPAPSRNMAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDKCH 116
GY AVA+M NL P P P R M + +GP VK+R+CN+ N+AEGCK+GDKCH
Sbjct: 63 GYQAVAKMTNLGGPAIAPPPGR-MPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCH 121
Query: 117 FAHGEWELGKPIAISHDDPRAFGAVP-GRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
FAHGE ELGKP+ + P G P G P PA ASFGASATAKISVDASL
Sbjct: 122 FAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTPASFGASATAKISVDASL 181
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AG IIG+GGVN+KQI R TGAKL+IRDHE+D NL+NIELEG+F+QIK ASAMVRELIV I
Sbjct: 182 AGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRELIVSI 241
Query: 236 G---PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
G P K P SNFKTKLC NF KGSCTFGDRCHFAHG ELRK+A
Sbjct: 242 GGGAPPQGKKPVGGSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGENELRKSA 298
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+++C C FGD+CHFAHGE EL K A
Sbjct: 267 KTKLCENFTKGS-CTFGDRCHFAHGENELRKSAA 299
>gi|75254437|sp|Q69XQ3.1|C3H44_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 44;
Short=OsC3H44
gi|51090454|dbj|BAD35424.1| KH domain-containing protein / zinc finger protein-like [Oryza
sativa Japonica Group]
Length = 295
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/292 (61%), Positives = 209/292 (71%), Gaps = 17/292 (5%)
Query: 5 KRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNA 64
KR PE G N ++ S+ GVGSK KPCTKFFST+GCPFG SCHFLH FPGGY A
Sbjct: 7 KRAAPE-GTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQA 65
Query: 65 VAQMMNLP-QAVPAPSRNMAVPPPASNGP--TVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
A+M + AV AP M + P A NGP + VK+RMCN+ N+AEGCK+G KCHFAHGE
Sbjct: 66 AAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGE 125
Query: 122 WELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP----AASFGASATAKISVDASLAG 177
ELGKP+ + + P G++P +E PP PGP ++FGASATAKISVDASLAG
Sbjct: 126 RELGKPMLLDNSMPHPMGSMP------FEAPPMPGPDIVPPSTFGASATAKISVDASLAG 179
Query: 178 AIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI-- 235
IIGKGG N+K I R TGAKL+IRD+E++PNL+NIELEG+F+QIK ASAMV ELIVRI
Sbjct: 180 GIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISG 239
Query: 236 GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
AKNP A P SNFKTKLC NF KGSCTFGDRCHFAHG +ELRK
Sbjct: 240 NAPPAKNPGRGSHAGGP-GSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
P R P SN K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 247 PGRGSHAGGPGSN----FKTKLCENFNKGS-CTFGDRCHFAHGESELRKPPA 293
>gi|326513723|dbj|BAJ87880.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/302 (60%), Positives = 216/302 (71%), Gaps = 20/302 (6%)
Query: 1 MDT-RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLH 56
MD RKR PE G N K+++ ESES GVGSKSKPCTKFFSTAGCPFG SCHFLH
Sbjct: 1 MDAGRKRAVPE-GTNGGAATKRAR-ESESVQTGVGSKSKPCTKFFSTAGCPFGSSCHFLH 58
Query: 57 YFPGGYNAVAQMMNL--PQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDK 114
FPGG+ AV++M NL P P R P P +K+R+CN+ N+AEGCK+G+K
Sbjct: 59 NFPGGHQAVSKMTNLGGPAVSAPPGRMPMGPGVPDGPPPSMKTRLCNKFNTAEGCKWGNK 118
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPA----ASFGASATAKIS 170
CHFAHGE ELGKP+ +++ G P G ++PPP PGP ++FGASATAKIS
Sbjct: 119 CHFAHGERELGKPMLLNNSMAPPMGPRPN---GHFQPPPMPGPDMVPPSTFGASATAKIS 175
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
VDASLAGAIIGKGGVN+K I R TGAKL+IRD+EADPN +NIELEGSF+Q+ ASAMV+E
Sbjct: 176 VDASLAGAIIGKGGVNTKHISRMTGAKLAIRDNEADPNHKNIELEGSFDQVNHASAMVKE 235
Query: 231 LIVRIG---PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
LI+RIG P AKN + SNFKTKLC NF KGSCTFGDRCHFAHG +ELRK
Sbjct: 236 LILRIGGNAPPQAKNAGRGPAGG--GGSNFKTKLCDNFNKGSCTFGDRCHFAHGESELRK 293
Query: 288 TA 289
+A
Sbjct: 294 SA 295
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+++C+ N C FGD+CHFAHGE EL K A
Sbjct: 264 KTKLCDNFNKGS-CTFGDRCHFAHGESELRKSAA 296
>gi|242060846|ref|XP_002451712.1| hypothetical protein SORBIDRAFT_04g006450 [Sorghum bicolor]
gi|241931543|gb|EES04688.1| hypothetical protein SORBIDRAFT_04g006450 [Sorghum bicolor]
Length = 295
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/296 (60%), Positives = 208/296 (70%), Gaps = 17/296 (5%)
Query: 4 RKRTKPETGINANGVFKKSKHES--ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR K + A+ K+S+ +SGVGSKSKPCT FFST+GCPFGE CHFLHYFPGG
Sbjct: 5 RKRGKADGAKGASAGAKRSRESESFQSGVGSKSKPCTNFFSTSGCPFGEGCHFLHYFPGG 64
Query: 62 YNAVAQMMNLP-QAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
Y AV++M NL + +P R PP PTV K+R+CN+ N+AEGCK+GDKCHFAHG
Sbjct: 65 YQAVSKMTNLGGTTIASPGRMTMDGPPT---PTV-KTRLCNKYNTAEGCKWGDKCHFAHG 120
Query: 121 EWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPA----ASFGASATAKISVDASLA 176
E ELGKP + P G P G + PPP P ASFGASATAKISVDASLA
Sbjct: 121 EKELGKPKLMGSYMPPPMGPRPT---GHFAPPPMASPGLATPASFGASATAKISVDASLA 177
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI- 235
G IIG+GGVN+KQI R TGAKL+IRDHE+D +L+NIELEG+F+QI+ ASAMV ELIV I
Sbjct: 178 GGIIGRGGVNTKQISRVTGAKLAIRDHESDTSLKNIELEGTFDQIRNASAMVSELIVSIS 237
Query: 236 --GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
P AKNPA SNFKTK+C NFAKGSC+FGD+CHFAHG ELRK A
Sbjct: 238 GNAPPQAKNPAGGTHRGGRTGSNFKTKMCENFAKGSCSFGDKCHFAHGDNELRKPA 293
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC N A+G C FGDKCHFAHG+ EL KP A
Sbjct: 262 KTKMCE--NFAKGSCSFGDKCHFAHGDNELRKPAA 294
>gi|357123849|ref|XP_003563620.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Brachypodium distachyon]
Length = 298
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 218/302 (72%), Gaps = 19/302 (6%)
Query: 1 MDT-RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLH 56
MD RKR PE G N G K+ + ESES GVGSKSKPCTKFFSTAGCPFG CHFLH
Sbjct: 1 MDAGRKRAVPE-GTNGGGAAKRPR-ESESFQMGVGSKSKPCTKFFSTAGCPFGSGCHFLH 58
Query: 57 YFPGGYNAVAQMMNLP-QAVPAPSRNMAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGD 113
FPGG+ AV++M NL AV P M + P +GP VK+RMCN+ N+AEGCK+G+
Sbjct: 59 NFPGGHQAVSKMTNLGGPAVATPPGRMPMGPGVPDGPPTPGVKTRMCNKFNTAEGCKWGN 118
Query: 114 KCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP----AASFGASATAKI 169
KCHFAHGE ELGKP+ +++ G P G + PPP P P ++FGASATAKI
Sbjct: 119 KCHFAHGERELGKPMLLNNSMVPPMGPRPN---GHFVPPPMPAPDMVPPSTFGASATAKI 175
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
SVDASLAGAIIGKGGVN+K I R TGAKL+IRD+EADPN +NIELEG+F+QIK AS+MV
Sbjct: 176 SVDASLAGAIIGKGGVNTKHISRITGAKLAIRDNEADPNFKNIELEGTFDQIKYASSMVT 235
Query: 230 ELIVRIG--PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+LIVRIG AKNP T G +NFKTKLC NF+KGSCTFGDRCHFAHG +ELRK
Sbjct: 236 DLIVRIGGNAPPAKNP-TRGPHVGGGGNNFKTKLCDNFSKGSCTFGDRCHFAHGESELRK 294
Query: 288 TA 289
+
Sbjct: 295 SV 296
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
P++N P G K+++C+ + C FGD+CHFAHGE EL K +A
Sbjct: 247 PAKNPTRGPHVGGGGNNFKTKLCDNFSKGS-CTFGDRCHFAHGESELRKSVA 297
>gi|297598761|ref|NP_001046176.2| Os02g0194200 [Oryza sativa Japonica Group]
gi|255670684|dbj|BAF08090.2| Os02g0194200, partial [Oryza sativa Japonica Group]
Length = 281
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/280 (63%), Positives = 202/280 (72%), Gaps = 10/280 (3%)
Query: 19 FKKSKHES-ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNL--PQAV 75
F ++ ES ++GVGSKSKPCTKFFST+GCPFGE CHFLH+FPGGY AVA+M NL P
Sbjct: 1 FDATESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIA 60
Query: 76 PAPSRNMAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHD 133
P P R M + +GP VK+R+CN+ N+AEGCK+GDKCHFAHGE ELGKP+ +
Sbjct: 61 PPPGR-MPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSS 119
Query: 134 DPRAFGAVP-GRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICR 192
P G P G P PA ASFGASATAKISVDASLAG IIG+GGVN+KQI R
Sbjct: 120 MPPPMGPRPTGHFAPPPMPSPAMSTPASFGASATAKISVDASLAGGIIGRGGVNTKQISR 179
Query: 193 QTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG---PAHAKNPATAGSA 249
TGAKL+IRDHE+D NL+NIELEG+F+QIK ASAMVRELIV IG P K P
Sbjct: 180 VTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRELIVSIGGGAPPQGKKPVGGSHR 239
Query: 250 AHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
SNFKTKLC NF KGSCTFGDRCHFAHG ELRK+A
Sbjct: 240 GGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGENELRKSA 279
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+++C C FGD+CHFAHGE EL K A
Sbjct: 248 KTKLCENFTKGS-CTFGDRCHFAHGENELRKSAA 280
>gi|212274875|ref|NP_001130916.1| uncharacterized protein LOC100192020 [Zea mays]
gi|194690436|gb|ACF79302.1| unknown [Zea mays]
gi|195629448|gb|ACG36365.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|408690354|gb|AFU81637.1| C3H-type transcription factor, partial [Zea mays subsp. mays]
gi|414584922|tpg|DAA35493.1| TPA: putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
Length = 307
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 216/307 (70%), Gaps = 29/307 (9%)
Query: 4 RKRTKPETGINANGVFKKSKHES--ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR++PET A K+SK ++G+ SKSKPCTKFFST GCPFGE CHFLH+ PGG
Sbjct: 8 RKRSRPETANGAAAAGKRSKDTESFQTGLSSKSKPCTKFFSTIGCPFGEGCHFLHFVPGG 67
Query: 62 YNAVAQMMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHF 117
Y AVA+M+NL AV APSR + A AS+ + VK+RMC + N+ EGCKFGDKCHF
Sbjct: 68 YPAVAKMLNLSSSAVSAPSRTHVDHAALTGASHPASTVKTRMCTKYNTTEGCKFGDKCHF 127
Query: 118 AHGEWELGKPIAISHDDPRAFGAVPGRMGGRY---EP--PPAPGP-AASFGASATAKISV 171
AH E EL KP +S + P MGGRY EP P A GP A +FGASATAKISV
Sbjct: 128 AHSERELAKPAYMSQEGPP--------MGGRYGRAEPMQPAAMGPPAGNFGASATAKISV 179
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
DASLAG IIGKGGVN+KQI R TG KLSIRDHE++PNL+NIELEG+F+QIKQAS +VR+L
Sbjct: 180 DASLAGGIIGKGGVNTKQISRITGVKLSIRDHESNPNLKNIELEGNFDQIKQASDLVRDL 239
Query: 232 IVRIGPAH-AKNPATAGSAAHPL--------SSNFKTKLCGNFAKGSCTFGDRCHFAHGA 282
I I + AKNP+ A + A SSN+KTKLC NF KG+CTFGDRCHFAHG
Sbjct: 240 IATISASMPAKNPSAAAAPAGGGRGGGPGGKSSNYKTKLCENFLKGACTFGDRCHFAHGE 299
Query: 283 AELRKTA 289
E R+ A
Sbjct: 300 TEQRRGA 306
>gi|242074692|ref|XP_002447282.1| hypothetical protein SORBIDRAFT_06g032000 [Sorghum bicolor]
gi|241938465|gb|EES11610.1| hypothetical protein SORBIDRAFT_06g032000 [Sorghum bicolor]
Length = 306
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/302 (58%), Positives = 209/302 (69%), Gaps = 20/302 (6%)
Query: 4 RKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR++PE+ G A G K ++G SKSKPCTKFFST GCPFGE CHFLH+ PGG
Sbjct: 8 RKRSRPESANGYAAGGKRSKDTESFQTGQSSKSKPCTKFFSTIGCPFGEGCHFLHFVPGG 67
Query: 62 YNAVAQMMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHF 117
Y AVA+M+NL AV APSR + A AS+ ++ K+RMC + N+ EGCKFGDKCHF
Sbjct: 68 YPAVAKMLNLGSPAVSAPSRTHVDHAALTGASHQASMGKTRMCTKYNTTEGCKFGDKCHF 127
Query: 118 AHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPG---PAASFGASATAKISVDAS 174
AH E ELGKP +SH+ P + GR GGR EP PA +FGASATAKISVDAS
Sbjct: 128 AHSERELGKPAYMSHEGP----PMGGRYGGRPEPLQQASMGPPAGNFGASATAKISVDAS 183
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAG IIGKGGVN+KQI R TG KLSIRDHE++P+ +NIELEG+F+QIKQAS MVR+LI
Sbjct: 184 LAGGIIGKGGVNTKQISRVTGVKLSIRDHESNPSQKNIELEGNFDQIKQASDMVRDLIAT 243
Query: 235 IGPAH-AKN------PATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
I + AKN PA SN+KTKLC NF KG+CTFGDRCHFAHG E R+
Sbjct: 244 ISASMPAKNLSASAAPAGGRGGGLGGRSNYKTKLCENFVKGACTFGDRCHFAHGETEQRR 303
Query: 288 TA 289
A
Sbjct: 304 GA 305
>gi|449462589|ref|XP_004149023.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
gi|449502203|ref|XP_004161573.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 308
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/309 (57%), Positives = 215/309 (69%), Gaps = 29/309 (9%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR + ET +N NG FKKSK E +S G+GSKS+PCTKFFST+GCPFGE CHF HY PG
Sbjct: 7 RKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPG 66
Query: 61 GYNAVAQMMNLPQAVPAPSRNMAVPPPASNG-PTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
G +++QM++ A+P RN A P +G P VK+R+CN+ NSAEGC+FGDKC++AH
Sbjct: 67 GVKSISQMIS--PALPPGIRNPAPPQSFPDGVPPAVKTRLCNKFNSAEGCRFGDKCYYAH 124
Query: 120 GEWELGKPIAISHDDPRAFGAV-PGRM--------GGRYEPPPAPGPAASFGASATAKIS 170
GEWELG+P + P+ G + PG M PPP GPAASFGASATAKIS
Sbjct: 125 GEWELGRP-----NPPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKIS 179
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
VDASLAG IIGK GVNSK ICR TGA+LSI++HE+DPNL+NIELEG+F+QI AS+MVRE
Sbjct: 180 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVRE 239
Query: 231 LIVRIGPAHAKNPATAGSAAHPLS---------SNFKTKLCGNFAKGSCTFGDRCHFAHG 281
LI +G A A N S +NFKTKLC NF KG+CTF +RCHFAHG
Sbjct: 240 LIANVGAASANNAMKQHQQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAHG 299
Query: 282 AAELRKTAI 290
+ELRK +
Sbjct: 300 ESELRKPGM 308
>gi|357139266|ref|XP_003571204.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Brachypodium distachyon]
Length = 300
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/292 (59%), Positives = 198/292 (67%), Gaps = 17/292 (5%)
Query: 12 GINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQM 68
G N K ESES GVGSKSKPCTKFFSTAGCPFGE CHFLH FPGG+ AVA+M
Sbjct: 10 GANGASTGGKRARESESIQTGVGSKSKPCTKFFSTAGCPFGEGCHFLHNFPGGHQAVAKM 69
Query: 69 MNLPQAVPA-PSRNMAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELG 125
NL A P M P + P +K+R+CN+ N+AEGCK+GDKCHFAHGE ELG
Sbjct: 70 SNLGGTTFAHPPGRMPTGPAGPDAPPTPTIKTRLCNKYNTAEGCKWGDKCHFAHGERELG 129
Query: 126 KPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPA----ASFGASATAKISVDASLAGAIIG 181
K I P G P + PP P P ASFGASATAKISVD SLAGAIIG
Sbjct: 130 KHTFIDSSIPPHMGPRPTS---HFAPPAMPNPGMVTPASFGASATAKISVDGSLAGAIIG 186
Query: 182 KGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHA- 240
+GG+N+KQI R TGAKL+IRDHE+D +L+NIELEG+F+QIK ASAMV +LIV I ++A
Sbjct: 187 RGGINTKQISRVTGAKLAIRDHESDDSLKNIELEGTFDQIKNASAMVTDLIVSISGSNAL 246
Query: 241 ---KNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
KNPA NFKTKLC NF KGSCTFGDRCHFAHG ELRK+A
Sbjct: 247 PPGKNPAAVSHRGGGPGGNFKTKLCENFTKGSCTFGDRCHFAHGENELRKSA 298
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 63 NAVAQMMNLPQAVPA-----PSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCH 116
NA A + +L ++ P +N A GP K+++C C FGD+CH
Sbjct: 228 NASAMVTDLIVSISGSNALPPGKNPAAVSHRGGGPGGNFKTKLCENFTKGS-CTFGDRCH 286
Query: 117 FAHGEWELGKPIAI 130
FAHGE EL K A+
Sbjct: 287 FAHGENELRKSAAV 300
>gi|195654205|gb|ACG46570.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 306
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 208/302 (68%), Gaps = 20/302 (6%)
Query: 5 KRTKPETGINANGVFKKSKHES--ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY 62
KR++ ET A G K+SK ++G+ SKSKPC KFFST GCPFGE C FLH+ PGGY
Sbjct: 9 KRSRTETANGAAGGGKRSKDMESFQTGLSSKSKPCNKFFSTIGCPFGEGCRFLHFVPGGY 68
Query: 63 NAVAQMMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
AVA+M+NL AV APSR + A AS+ + K+RMC + N+ EGC+FGDKCHFA
Sbjct: 69 PAVAKMLNLGSPAVSAPSRTHVDHAALTGASHSASSGKTRMCTKYNTTEGCRFGDKCHFA 128
Query: 119 HGEWELGKPIAISHDDPRAFGAVPGRMGGRYEP--PPAPGP-AASFGASATAKISVDASL 175
H E ELGKP + + +P + GR GGR EP P A GP A +FGASATAKISVDASL
Sbjct: 129 HSERELGKPAYMPYGEP----PMGGRFGGRPEPVQPAAMGPPAGNFGASATAKISVDASL 184
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AG IIGKGGVN+KQI R TG KL IRDHE+ PNL+NIELEG+F+QIKQA MVR+LI I
Sbjct: 185 AGGIIGKGGVNTKQISRVTGVKLCIRDHESSPNLKNIELEGNFDQIKQAGEMVRDLIATI 244
Query: 236 GPAH-AKN------PATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
+ AKN P+ SN+KTKLC NF KG+CTFG+RCHFAHG E R+
Sbjct: 245 STSMLAKNSSAAVAPSGGRGGGLGGKSNYKTKLCENFVKGACTFGERCHFAHGENEQRRG 304
Query: 289 AI 290
A+
Sbjct: 305 AV 306
>gi|357166609|ref|XP_003580767.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
[Brachypodium distachyon]
Length = 298
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/297 (59%), Positives = 210/297 (70%), Gaps = 19/297 (6%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR++ +T ANG K+SK E+ES G+ SKSKPCTKFFST GCPFGE CHFLH+ PG
Sbjct: 8 RKRSRTDT---ANGGAKRSK-ETESQQTGLSSKSKPCTKFFSTVGCPFGEGCHFLHFVPG 63
Query: 61 GYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCHFAH 119
GY AV++ NL A + V A++ P K+RMC + N+AEGC+FGDKCHFAH
Sbjct: 64 GYQAVSKTHNLGHAAASAPSRAPVDHGANSHPAPAGKTRMCTKYNTAEGCRFGDKCHFAH 123
Query: 120 GEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAP-GPAA-SFGASATAKISVDASLAG 177
GE ELG+ +++ P A + GR G R+EP PA GP SFGASATAKISVDA+LAG
Sbjct: 124 GERELGR---TTYESPYA-PPMGGRFGSRHEPHPAMMGPTTGSFGASATAKISVDAALAG 179
Query: 178 AIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 237
IIGK GVN+KQICR TG KLSIRDHE+DPNL+NIELEG+F+QIKQAS MV ELI I
Sbjct: 180 GIIGKSGVNTKQICRVTGVKLSIRDHESDPNLKNIELEGNFDQIKQASDMVGELIATISA 239
Query: 238 AH-AKNPATA----GSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+ KNPA A G SN+KTK+C NF KG+CTFGDRCHFAHG E RK A
Sbjct: 240 STPLKNPAGAVPPAGRGGPGGRSNYKTKICENFLKGTCTFGDRCHFAHGENEQRKGA 296
>gi|295913670|gb|ADG58077.1| transcription factor [Lycoris longituba]
Length = 307
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 206/310 (66%), Gaps = 33/310 (10%)
Query: 4 RKRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYN 63
RKR +P+ ANG + + VGSKSKPCTKFFSTAGC FGE CHFLH+ PGGYN
Sbjct: 8 RKRWRPDA---ANGFAGSKRTKEMDSVGSKSKPCTKFFSTAGCQFGEGCHFLHFVPGGYN 64
Query: 64 AVAQMMNLPQAVPAPSRNMAV------------PPPASNGPTVVKSRMCNRLNSAEGCKF 111
AVAQM N+ AP PPPA VK++MCN+ NSAEGCKF
Sbjct: 65 AVAQMTNMGNPTHAPPPPRGPMGPPPAMPDPHGPPPA------VKTKMCNKFNSAEGCKF 118
Query: 112 GDKCHFAHGEWELGKPIAISHDDPRAFGAVPG---RMGGRYEPPPAPGPAASFGASATAK 168
GDKC+FAHGE ELGK I S D P G RMG R+EPPP P +FGASATAK
Sbjct: 119 GDKCNFAHGEGELGKRIIPSRDGPMGGPPPMGAAGRMGNRFEPPPPV-PPTTFGASATAK 177
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
ISVD+SLAGAIIGKGGVN+K ICR TGAKL+IRDHE++ NLRNIELEG+F+QI +ASAMV
Sbjct: 178 ISVDSSLAGAIIGKGGVNTKHICRVTGAKLAIRDHESNANLRNIELEGTFDQINKASAMV 237
Query: 229 RELIVRI--------GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAH 280
+ELI+ I P P T H +SNFKTK+C NF KGSCTFGDRCHFAH
Sbjct: 238 QELIMNIRETTPMPAKPQAFAPPPTTQHRHHAGASNFKTKICDNFTKGSCTFGDRCHFAH 297
Query: 281 GAAELRKTAI 290
G ELR + +
Sbjct: 298 GTGELRASGV 307
>gi|212274387|ref|NP_001130092.1| uncharacterized protein LOC100191185 [Zea mays]
gi|194688270|gb|ACF78219.1| unknown [Zea mays]
gi|224033733|gb|ACN35942.1| unknown [Zea mays]
gi|407232610|gb|AFT82647.1| C3H52 transcription factor, partial [Zea mays subsp. mays]
gi|413919849|gb|AFW59781.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 306
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/302 (57%), Positives = 209/302 (69%), Gaps = 20/302 (6%)
Query: 5 KRTKPETGINANGVFKKSKHES--ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY 62
KR++ ET A G K+SK ++G+ SKSKPC KFFST GCPFGE C FLH+ PGGY
Sbjct: 9 KRSRTETANGAAGGGKRSKDMESFQTGLSSKSKPCNKFFSTIGCPFGEGCRFLHFVPGGY 68
Query: 63 NAVAQMMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
AVA+M+NL AV APSR + A S+ + K+RMC + N+ EGC+FGDKCHFA
Sbjct: 69 PAVAKMLNLGSPAVSAPSRTHVDHAALTGTSHSASSGKTRMCTKYNTTEGCRFGDKCHFA 128
Query: 119 HGEWELGKPIAISHDDPRAFGAVPGRMGGRYEP--PPAPGP-AASFGASATAKISVDASL 175
H E ELGKP + + +P + GR GGR EP P A GP A +FGASATAKISVDASL
Sbjct: 129 HSERELGKPAYMPYGEP----PMGGRFGGRPEPVQPAAMGPPAGNFGASATAKISVDASL 184
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AG IIGKGGVN+KQI R TG KL IRDHE+ PNL+NIELEG+F+QIKQA MVR+LI I
Sbjct: 185 AGGIIGKGGVNTKQISRVTGVKLCIRDHESSPNLKNIELEGNFDQIKQAGEMVRDLIATI 244
Query: 236 GPAH-AKNPATAGSAAHPLS------SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
+ AKN + A + A SN+KTKLC NFAKG+CTFG+RCHFAHG E R
Sbjct: 245 STSMPAKNSSAAVAPAGGRGGGLGSKSNYKTKLCENFAKGACTFGERCHFAHGENEQRSG 304
Query: 289 AI 290
A+
Sbjct: 305 AV 306
>gi|212275666|ref|NP_001130889.1| uncharacterized protein LOC100191993 [Zea mays]
gi|194690374|gb|ACF79271.1| unknown [Zea mays]
gi|238008302|gb|ACR35186.1| unknown [Zea mays]
gi|408690356|gb|AFU81638.1| C3H-type transcription factor, partial [Zea mays subsp. mays]
gi|413943639|gb|AFW76288.1| zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1 [Zea
mays]
gi|413943640|gb|AFW76289.1| zinc finger C-x8-C-x5-C-x3-H type family protein isoform 2 [Zea
mays]
Length = 301
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/300 (59%), Positives = 201/300 (67%), Gaps = 12/300 (4%)
Query: 1 MDT-RKRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFP 59
MDT RKRT PE G N G K+++ +GVGSKSKPCTKFFSTAGCPFG SCHFLH FP
Sbjct: 1 MDTGRKRTAPE-GANGAGGPKRARESETTGVGSKSKPCTKFFSTAGCPFGASCHFLHNFP 59
Query: 60 GGYNAVAQMMNLPQAVPAPSRN---MAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCH 116
GGY AV++M NL M P VK+RMCN+ N+AEGCK+G KCH
Sbjct: 60 GGYQAVSKMTNLGGPPVPAPPGRMPMGPGGPDGPPSPAVKTRMCNKYNTAEGCKWGSKCH 119
Query: 117 FAHGEWELGKPIAISHDDPRAFGAVPG--RMGGRYEPPPAPGPAASFGASATAKISVDAS 174
FAHGE ELGKP+ + + P P P ++FGASATAKISVDAS
Sbjct: 120 FAHGERELGKPLQMDNPMGPPPMGPGPNGHFMPPPMPFPDMVPPSTFGASATAKISVDAS 179
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGG N+K I R TGAKL+IRD+EADPN +NIELEG+F+QIK ASAMV ELIVR
Sbjct: 180 LAGAIIGKGGTNTKHISRVTGAKLAIRDNEADPNHKNIELEGTFDQIKHASAMVTELIVR 239
Query: 235 IG---PAHAKNPATAGSAAHPL--SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
I P AKN G +H SNFKTKLC NF KGSCTFGDRCHFAHG ELRK A
Sbjct: 240 ISGKPPPQAKNNPGRGPGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGEGELRKPA 299
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 72 PQAVPAPSRNMAVPPPASNGP-TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
PQA P R P + GP + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 246 PQAKNNPGRG---PGSHAGGPGSNFKTKLCENFNKGS-CTFGDRCHFAHGEGELRKPAA 300
>gi|359359033|gb|AEV40940.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza punctata]
Length = 308
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 201/306 (65%), Gaps = 26/306 (8%)
Query: 4 RKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR++P+T G A G + ++G+ SKSKPCTKFFST GCPFGE CHF H+ PGG
Sbjct: 8 RKRSRPDTANGGAAGGKRSRETESFQTGLSSKSKPCTKFFSTVGCPFGEGCHFSHFVPGG 67
Query: 62 YNAVAQMMNLPQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
Y AVA+ +NL + A S+ + K+RMC + N+AEGCKFGDKCHFA
Sbjct: 68 YQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHSASSGKTRMCTKYNTAEGCKFGDKCHFA 127
Query: 119 HGEWELGKPIAISHDDPRAFGAVPGRMGGRY-------EPPPAPGPAASFGASATAKISV 171
HGE ELGKP +SH+ A P MGGRY P PA +FGASATAKISV
Sbjct: 128 HGERELGKPAYMSHESAMA----P--MGGRYGSRPEPPPPAAMGPPAGNFGASATAKISV 181
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
DASLAG IIGKGGVN+KQICR TG KLSIRDHE+DPNL+NIELEG+F+QIKQAS MV EL
Sbjct: 182 DASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDPNLKNIELEGNFDQIKQASNMVGEL 241
Query: 232 IVRIGPA--------HAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAA 283
I I + A A AG +N+KTKLC NF KG+CTFGDRCHFAHG
Sbjct: 242 IATISASTPTKKPAGSAAGAAPAGRGGPGGRNNYKTKLCENFVKGTCTFGDRCHFAHGEN 301
Query: 284 ELRKTA 289
E RK A
Sbjct: 302 EQRKGA 307
>gi|359359084|gb|AEV40990.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza minuta]
Length = 308
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 203/306 (66%), Gaps = 26/306 (8%)
Query: 4 RKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR++P+T G A G + ++G+ SKSKPCTKFFST GCPFGE CHF H+ PGG
Sbjct: 8 RKRSRPDTANGGAAGGKRSRETESFQTGLSSKSKPCTKFFSTVGCPFGEGCHFSHFVPGG 67
Query: 62 YNAVAQMMNLPQAVPAPSRNMAVPPPA---SNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
Y AVA+ +NL + A S+ + K+RMC + N+AEGCKFGDKCHFA
Sbjct: 68 YQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHSASSGKTRMCTKYNTAEGCKFGDKCHFA 127
Query: 119 HGEWELGKPIAISHDDPRAFGAVPGRMGGRY-------EPPPAPGPAASFGASATAKISV 171
HGE ELGKP +SH+ A MGGRY P PA +FGASATAKISV
Sbjct: 128 HGERELGKPAYMSHESAMA------PMGGRYGSRPEPPPPAAMGPPAGNFGASATAKISV 181
Query: 172 DASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 231
DASLAG IIGKGGVN+KQICR TG KLSIRDHE+DPNL+NIELEG+F+QIKQAS MV EL
Sbjct: 182 DASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDPNLKNIELEGNFDQIKQASNMVGEL 241
Query: 232 IVRIGPAH-AKNPATAGSAAHPLS-------SNFKTKLCGNFAKGSCTFGDRCHFAHGAA 283
I I + K PA + + A P +N+KTKLC NF KG+CTFGDRCHFAHG
Sbjct: 242 IATISASTPTKKPAGSAAGAAPAGRGCPGGRNNYKTKLCENFVKGTCTFGDRCHFAHGEN 301
Query: 284 ELRKTA 289
E RK A
Sbjct: 302 EQRKGA 307
>gi|195643386|gb|ACG41161.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 301
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/300 (59%), Positives = 200/300 (66%), Gaps = 12/300 (4%)
Query: 1 MDT-RKRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFP 59
MDT RKRT PE G N K+++ +GVGSKSKPCTKFFSTAGCPFG SCHFLH FP
Sbjct: 1 MDTGRKRTAPE-GANGACGPKRARESETTGVGSKSKPCTKFFSTAGCPFGASCHFLHNFP 59
Query: 60 GGYNAVAQMMNLPQAVPAPSRN---MAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCH 116
GGY AV++M NL M P VK+RMCN+ N+AEGCK+G KCH
Sbjct: 60 GGYQAVSKMTNLGGPPVPAPPGRMPMGPGGPDGPPSPAVKTRMCNKYNTAEGCKWGSKCH 119
Query: 117 FAHGEWELGKPIAISHDDPRAFGAVPG--RMGGRYEPPPAPGPAASFGASATAKISVDAS 174
FAHGE ELGKP+ + + P P P ++FGASATAKISVDAS
Sbjct: 120 FAHGERELGKPLQMDNPMGPPPMGPGPNGHFMPPPMPFPDMVPPSTFGASATAKISVDAS 179
Query: 175 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 234
LAGAIIGKGG N+K I R TGAKL+IRD+EADPN +NIELEG+F+QIK ASAMV ELIVR
Sbjct: 180 LAGAIIGKGGTNTKHISRVTGAKLAIRDNEADPNHKNIELEGTFDQIKHASAMVTELIVR 239
Query: 235 IG---PAHAKNPATAGSAAHPL--SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
I P AKN G +H SNFKTKLC NF KGSCTFGDRCHFAHG ELRK A
Sbjct: 240 ISGKPPPQAKNNPGRGPGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGEGELRKPA 299
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 72 PQAVPAPSRNMAVPPPASNGP-TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
PQA P R P + GP + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 246 PQAKNNPGRG---PGSHAGGPGSNFKTKLCENFNKGS-CTFGDRCHFAHGEGELRKPAA 300
>gi|357445163|ref|XP_003592859.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481907|gb|AES63110.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 340
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 190/265 (71%), Gaps = 6/265 (2%)
Query: 29 GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQ--AVPAPSRNMAVPP 86
GV +P + F T+GCPFGE CHFLHY PGG+ AV QM+N+ A+P RN VP
Sbjct: 73 GVPRPQEPLWRDFDTSGCPFGEGCHFLHYVPGGFKAVYQMINVGSSPAIPPIGRNPNVPQ 132
Query: 87 --PASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAV-PG 143
P + P V K+R+CN+ N+AEGCKFGDKCHFAHGEWELG+P +++D RA G +
Sbjct: 133 SFPDGSSPPVAKTRLCNKFNTAEGCKFGDKCHFAHGEWELGRPTVPAYEDTRAMGQMQSS 192
Query: 144 RMGGRYEPPPAPGPAAS-FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
+GGR EPPP AA+ FG SATA +S++A+LAGAIIGK VNSKQIC TGAKLSIR+
Sbjct: 193 SVGGRIEPPPPAHGAAAGFGVSATATVSINATLAGAIIGKNDVNSKQICHITGAKLSIRE 252
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLC 262
H++DPNLRNIELEGSF+QIKQASAMV +LI+ + S ++NFKTKLC
Sbjct: 253 HDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPPGKNITSQTSAPANNFKTKLC 312
Query: 263 GNFAKGSCTFGDRCHFAHGAAELRK 287
NF KGSCTFG+RCHFAHG ELRK
Sbjct: 313 ENFTKGSCTFGERCHFAHGTDELRK 337
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 258 KTKLCGNFAKGS-CTFGDRCHFAHGAAELRKTAI 290
KT+LC F C FGD+CHFAHG EL + +
Sbjct: 144 KTRLCNKFNTAEGCKFGDKCHFAHGEWELGRPTV 177
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 68 MMNLPQAVPAPSRNMA--VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELG 125
++N+ P +N+ PA+N K+++C C FG++CHFAHG EL
Sbjct: 282 ILNVSSVSGPPGKNITSQTSAPANN----FKTKLCENFTKGS-CTFGERCHFAHGTDELR 336
Query: 126 KP 127
KP
Sbjct: 337 KP 338
>gi|115461158|ref|NP_001054179.1| Os04g0665700 [Oryza sativa Japonica Group]
gi|75232918|sp|Q7XPK1.1|C3H31_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 31;
Short=OsC3H31
gi|32488659|emb|CAE03586.1| OSJNBa0087O24.9 [Oryza sativa Japonica Group]
gi|113565750|dbj|BAF16093.1| Os04g0665700 [Oryza sativa Japonica Group]
gi|116308845|emb|CAH65982.1| H1005F08.11 [Oryza sativa Indica Group]
gi|215768501|dbj|BAH00730.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195775|gb|EEC78202.1| hypothetical protein OsI_17823 [Oryza sativa Indica Group]
gi|222629727|gb|EEE61859.1| hypothetical protein OsJ_16534 [Oryza sativa Japonica Group]
Length = 309
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 202/310 (65%), Gaps = 33/310 (10%)
Query: 4 RKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGG 61
RKR++P+T G A G + ++G+ SK KPCTKFFST GCPFGE CHF H+ PGG
Sbjct: 8 RKRSRPDTANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPGG 67
Query: 62 YNAVAQMMNLPQAVPAPSRNMAVPP-------PASNGPTVVKSRMCNRLNSAEGCKFGDK 114
Y AVA+ +NL + PAS+G K+RMC + N+AEGCKFGDK
Sbjct: 68 YQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSG----KTRMCTKYNTAEGCKFGDK 123
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAA-------SFGASATA 167
CHFAHGE ELGKP +SH+ A+ MGGRY P P P A +FGASATA
Sbjct: 124 CHFAHGERELGKPAYMSHES-----AMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATA 178
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
KISVDASLAG IIGKGGVN+KQICR TG KLSIRDHE+D NL+NIELEG+F+QIKQAS M
Sbjct: 179 KISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNM 238
Query: 228 VRELIVRIGPA--------HAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFA 279
V ELI I P+ A A AG SN+KTKLC NF KG+CTFGDRCHFA
Sbjct: 239 VGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFA 298
Query: 280 HGAAELRKTA 289
HG E RK A
Sbjct: 299 HGENEQRKGA 308
>gi|115468968|ref|NP_001058083.1| Os06g0618100 [Oryza sativa Japonica Group]
gi|113596123|dbj|BAF19997.1| Os06g0618100 [Oryza sativa Japonica Group]
Length = 259
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/255 (63%), Positives = 187/255 (73%), Gaps = 16/255 (6%)
Query: 42 STAGCPFGESCHFLHYFPGGYNAVAQMMNLP-QAVPAPSRNMAVPPPASNGP--TVVKSR 98
ST+GCPFG SCHFLH FPGGY A A+M + AV AP M + P A NGP + VK+R
Sbjct: 7 STSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTR 66
Query: 99 MCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP- 157
MCN+ N+AEGCK+G KCHFAHGE ELGKP+ + + P G++P +E PP PGP
Sbjct: 67 MCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMP------FEAPPMPGPD 120
Query: 158 ---AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIEL 214
++FGASATAKISVDASLAG IIGKGG N+K I R TGAKL+IRD+E++PNL+NIEL
Sbjct: 121 IVPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIEL 180
Query: 215 EGSFEQIKQASAMVRELIVRI--GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTF 272
EG+F+QIK ASAMV ELIVRI AKNP A P SNFKTKLC NF KGSCTF
Sbjct: 181 EGTFDQIKHASAMVTELIVRISGNAPPAKNPGRGSHAGGP-GSNFKTKLCENFNKGSCTF 239
Query: 273 GDRCHFAHGAAELRK 287
GDRCHFAHG +ELRK
Sbjct: 240 GDRCHFAHGESELRK 254
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 225 KTKLCENFNKGS-CTFGDRCHFAHGESELRKPPA 257
>gi|222635887|gb|EEE66019.1| hypothetical protein OsJ_21979 [Oryza sativa Japonica Group]
Length = 307
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/254 (62%), Positives = 186/254 (73%), Gaps = 16/254 (6%)
Query: 43 TAGCPFGESCHFLHYFPGGYNAVAQMMNLP-QAVPAPSRNMAVPPPASNGP--TVVKSRM 99
T+GCPFG SCHFLH FPGGY A A+M + AV AP M + P A NGP + VK+RM
Sbjct: 56 TSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRM 115
Query: 100 CNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP-- 157
CN+ N+AEGCK+G KCHFAHGE ELGKP+ + + P G++P +E PP PGP
Sbjct: 116 CNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMP------FEAPPMPGPDI 169
Query: 158 --AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELE 215
++FGASATAKISVDASLAG IIGKGG N+K I R TGAKL+IRD+E++PNL+NIELE
Sbjct: 170 VPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELE 229
Query: 216 GSFEQIKQASAMVRELIVRI--GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFG 273
G+F+QIK ASAMV ELIVRI AKNP A P SNFKTKLC NF KGSCTFG
Sbjct: 230 GTFDQIKHASAMVTELIVRISGNAPPAKNPGRGSHAGGP-GSNFKTKLCENFNKGSCTFG 288
Query: 274 DRCHFAHGAAELRK 287
DRCHFAHG +ELRK
Sbjct: 289 DRCHFAHGESELRK 302
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
P R P SN K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 259 PGRGSHAGGPGSN----FKTKLCENFNKGS-CTFGDRCHFAHGESELRKPPA 305
>gi|218198551|gb|EEC80978.1| hypothetical protein OsI_23711 [Oryza sativa Indica Group]
Length = 307
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/254 (62%), Positives = 186/254 (73%), Gaps = 16/254 (6%)
Query: 43 TAGCPFGESCHFLHYFPGGYNAVAQMMNLP-QAVPAPSRNMAVPPPASNGP--TVVKSRM 99
T+GCPFG SCHFLH FPGGY A A+M + AV AP M + P A NGP + VK+RM
Sbjct: 56 TSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRM 115
Query: 100 CNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGP-- 157
CN+ N+AEGCK+G KCHFAHGE ELGKP+ + + P G++P +E PP PGP
Sbjct: 116 CNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMP------FEAPPMPGPDI 169
Query: 158 --AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELE 215
++FGASATAKISVDASLAG IIGKGG N+K I R TGAKL+IRD+E++PNL+NIELE
Sbjct: 170 VPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELE 229
Query: 216 GSFEQIKQASAMVRELIVRI--GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFG 273
G+F+QIK ASAMV ELIVRI AKNP A P SNFKTKLC NF KGSCTFG
Sbjct: 230 GTFDQIKHASAMVTELIVRISGNVPPAKNPGRGSHAGGP-GSNFKTKLCENFNKGSCTFG 288
Query: 274 DRCHFAHGAAELRK 287
DRCHFAHG +ELRK
Sbjct: 289 DRCHFAHGESELRK 302
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
P R P SN K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 259 PGRGSHAGGPGSN----FKTKLCENFNKGS-CTFGDRCHFAHGESELRKPPA 305
>gi|226499622|ref|NP_001150722.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|195641316|gb|ACG40126.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|238014384|gb|ACR38227.1| unknown [Zea mays]
gi|413954799|gb|AFW87448.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
Length = 303
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/296 (57%), Positives = 195/296 (65%), Gaps = 41/296 (13%)
Query: 21 KSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPA 77
K ESE+ GVGSK+KPCTKFFSTAGCPFG +CHFLH FPGGY AV++M NL
Sbjct: 20 KRARESETTQMGVGSKTKPCTKFFSTAGCPFGSNCHFLHNFPGGYLAVSKMTNLGGPPVP 79
Query: 78 PSRN---MAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDD 134
M P +K+R+CN+ N+AEGCK+G KCHFAHGE ELGKP+ + +
Sbjct: 80 APPGRMPMGPGGPDGPPSPALKTRLCNKYNTAEGCKWGSKCHFAHGERELGKPLQMDNS- 138
Query: 135 PRAFGAVPGRMGGRYEPPPAPGPA----------------ASFGASATAKISVDASLAGA 178
MG PP PGP ++FGASATAKISVDASLAGA
Sbjct: 139 ----------MGA---PPMGPGPNGHFMPPPMPIPDMVPHSTFGASATAKISVDASLAGA 185
Query: 179 IIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG-- 236
IIGK G+N+K I R TGAKL+IRD+EADPN +NIELEG+F+QIK ASAMV ELIVRI
Sbjct: 186 IIGKSGINTKHISRVTGAKLAIRDNEADPNHKNIELEGTFDQIKHASAMVTELIVRISGK 245
Query: 237 -PAHAKNPATAGSAAHP--LSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
P AKN G +H +SNFKTKLC NF KGSCTFGDRCHFAHG +ELRK A
Sbjct: 246 VPPQAKNNPGRGPGSHAGGPASNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPA 301
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 84 VPPPASNGP------------TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
VPP A N P + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 246 VPPQAKNNPGRGPGSHAGGPASNFKTKLCENFNKGS-CTFGDRCHFAHGESELRKPAA 302
>gi|297834004|ref|XP_002884884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297330724|gb|EFH61143.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 245
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 189/300 (63%), Gaps = 69/300 (23%)
Query: 1 MDTRKRTKPETG-INANGV-FKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MDTRKR +PE G N+NG +KKSK E ES G+GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1 MDTRKRGRPEVGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNAVAQM N+ +P SRNM S G +F
Sbjct: 61 HYVPGGYNAVAQMTNMGPPMPQVSRNMQ--------------------GSGNGGRF---- 96
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
GR E P G +SFGASATAKISVDASL
Sbjct: 97 ------------------------------SGRGESGP--GHVSSFGASATAKISVDASL 124
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGGV+SKQICRQTGAKLSI+DHE DPNL+NIELEG+FEQI +ASAMVRELI R+
Sbjct: 125 AGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASAMVRELIGRL 184
Query: 236 GPAHAKNPATAGSAA-------HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
A K P G HP SNFKTK+C ++KG+CTFGDRCHFAHG AELR++
Sbjct: 185 NSAAKKPPGGLGGGGMGSEGKPHP-GSNFKTKICERYSKGNCTFGDRCHFAHGEAELRRS 243
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 85 PPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
P P SN K+++C R + C FGD+CHFAHGE EL + IA
Sbjct: 206 PHPGSN----FKTKICERYSKGN-CTFGDRCHFAHGEAELRRSIA 245
>gi|116786468|gb|ABK24117.1| unknown [Picea sitchensis]
Length = 301
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/314 (50%), Positives = 197/314 (62%), Gaps = 41/314 (13%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RK+ K + N NG + E ES +GSKSK C KFFST+GCPFGE CH+LHY
Sbjct: 1 MDPRKKPKTQLHPNDNGDANPNSTEKESISTALGSKSKACIKFFSTSGCPFGEGCHYLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNM-----AVPPPASNGPTV-VKSRMCNRLNSAEGCKF 111
PGG NA+ + L A SR +VPP P + K+R+CNR + EGC+F
Sbjct: 61 VPGGVNAIPPIPTLGNTFGAASRKAIGFTPSVPPLDKPDPGLGFKTRLCNRYGTNEGCQF 120
Query: 112 GDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRY----------------EPPPAP 155
GDKCHFAHGE EL K ++ D R R+ G Y +PPP
Sbjct: 121 GDKCHFAHGEKELRKGNVLAKDLDRE------RIAGPYSSMAASGVDSGHSLYRDPPPGT 174
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELE 215
AA+FGAS+TAKIS+DASLA IIGKGGVN+KQI R TG K+ I+++E++PNL+NIELE
Sbjct: 175 AAAANFGASSTAKISIDASLASCIIGKGGVNTKQIFRITGTKMFIKENESNPNLKNIELE 234
Query: 216 GSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDR 275
GSF+QIKQA+AMVRELI+ +A P N KTKLC N+AKG+CTFGDR
Sbjct: 235 GSFDQIKQATAMVRELIMH----------NEIQSAKPYVQNRKTKLCENYAKGTCTFGDR 284
Query: 276 CHFAHGAAELRKTA 289
C+FAHGA ELR+ +
Sbjct: 285 CNFAHGANELREQS 298
>gi|297810789|ref|XP_002873278.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319115|gb|EFH49537.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/298 (53%), Positives = 185/298 (62%), Gaps = 66/298 (22%)
Query: 1 MDTRKRTKPETGI--NANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MD RKR +PE N+NG FK+SK E ES G+GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1 MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNA AQM NL V SRNM
Sbjct: 61 HYVPGGYNAAAQMTNLRPPVAQVSRNM--------------------------------- 87
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
+ FG GR GR + PGP + FGASAT+KISVDASL
Sbjct: 88 --------------------QGFGGPGGRFSGRGD--QGPGPVSIFGASATSKISVDASL 125
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGG++SKQICRQTGAKLSI+DHE DPNL+ IELEG+FEQI AS MVRELI R+
Sbjct: 126 AGAIIGKGGIHSKQICRQTGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGRL 185
Query: 236 GPAHAKNPATAGSAA---HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
G AK P G HP SN+KTK+C ++KG+CT+GDRCHFAHG AELR++ I
Sbjct: 186 GS--AKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGEAELRRSGI 240
>gi|312283503|dbj|BAJ34617.1| unnamed protein product [Thellungiella halophila]
Length = 244
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/300 (55%), Positives = 187/300 (62%), Gaps = 67/300 (22%)
Query: 1 MDTRKRTKPETG-INANGV-FKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MD RKR +PE G N+NG FKKSK E ES G+GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1 MDARKRGRPEAGSYNSNGGGFKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNAVAQ+ N+ +P SRNM P V R R S G
Sbjct: 61 HYVPGGYNAVAQLTNMGPPMPQVSRNMQGP--------VGGGRFSGRGESGPG------- 105
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
H + +FGA SATAKISVDASL
Sbjct: 106 HVS------------------SFGA-----------------------SATAKISVDASL 124
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGGV+SKQICRQTGAKLSI+DHE DPNL+NIELEG+FEQI +ASAMVRELI R+
Sbjct: 125 AGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASAMVRELIGRL 184
Query: 236 GPAHAKNPATAGSAA-----HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
A K P G HP SNFKTK+C F+KG+CTFGDRCHFAHG AELR++ I
Sbjct: 185 NSAARKPPGGGGGIGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEAELRRSGI 243
>gi|116794063|gb|ABK26992.1| unknown [Picea sitchensis]
Length = 337
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/281 (58%), Positives = 195/281 (69%), Gaps = 32/281 (11%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPP- 86
+G+ SKSK CTKFFST+GCPFGE+CHF+HY PGG N ++Q+ NL + SR PP
Sbjct: 67 TGLRSKSKACTKFFSTSGCPFGENCHFMHYIPGGMNLISQVSNLGSGLGTASRKSTGPPT 126
Query: 87 ---PASNGPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK-----PI----AISH 132
P+ V K+R+CNR +AEGC+FGDKCHFAH E EL K P+ +S
Sbjct: 127 SILPSDQAAPVQPYKTRICNRYGTAEGCRFGDKCHFAHSENELKKGNTLAPVERERTLSS 186
Query: 133 DDPRAFGAVPGRMGGRY---EP-PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK 188
G + GR GGR EP PP AASFGASATAKISVDASLAGAIIGKGGVNSK
Sbjct: 187 YGRPVPGVMDGRPGGRLVQREPTPPGMAAAASFGASATAKISVDASLAGAIIGKGGVNSK 246
Query: 189 QICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGS 248
QIC TGAKL+IRDHE+D NL+NIELEGSF+QIK AS MV ELI++ T+
Sbjct: 247 QICHATGAKLAIRDHESDSNLKNIELEGSFDQIKLASTMVHELIMQ----------TSAV 296
Query: 249 AAHP---LSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
AA P + +N+KTK+C NF++G+CTFGDRCHFAHGA+ELR
Sbjct: 297 AAKPSGFVFNNYKTKVCENFSQGTCTFGDRCHFAHGASELR 337
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 236 GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGS-CTFGDRCHFAHGAAELRK 287
GP + P+ + P +KT++C + C FGD+CHFAH EL+K
Sbjct: 123 GPPTSILPSDQAAPVQP----YKTRICNRYGTAEGCRFGDKCHFAHSENELKK 171
>gi|18399496|ref|NP_566412.1| zinc finger CCCH domain-containing protein 36 [Arabidopsis
thaliana]
gi|75268236|sp|Q9C7C3.1|C3H36_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 36;
Short=AtC3H36
gi|12322002|gb|AAG51040.1|AC069473_2 unknown protein; 15726-17646 [Arabidopsis thaliana]
gi|21553871|gb|AAM62964.1| unknown [Arabidopsis thaliana]
gi|90962966|gb|ABE02407.1| At3g12130 [Arabidopsis thaliana]
gi|110742972|dbj|BAE99380.1| hypothetical protein [Arabidopsis thaliana]
gi|332641633|gb|AEE75154.1| zinc finger CCCH domain-containing protein 36 [Arabidopsis
thaliana]
Length = 248
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/304 (52%), Positives = 184/304 (60%), Gaps = 71/304 (23%)
Query: 1 MDTRKRTKPETG-INANGV-FKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MDTRKR +PE G N+NG +KKSK E ES G+GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1 MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNAV+QM N+ +P SRNM S G +F
Sbjct: 61 HYVPGGYNAVSQMTNMGPPIPQVSRNMQ--------------------GSGNGGRF---- 96
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
GR E P G ++FG SATA+ SVDASL
Sbjct: 97 ------------------------------SGRGESGP--GHVSNFGDSATARFSVDASL 124
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGGV+SKQICRQTG KLSI+DHE DPNL+NI LEG+ EQI +ASAMV++LI R+
Sbjct: 125 AGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRL 184
Query: 236 GPAHAKNPATAGSAA---------HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A K P HP SNFKTK+C F+KG+CTFGDRCHFAHG AELR
Sbjct: 185 NSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEAELR 243
Query: 287 KTAI 290
K+ I
Sbjct: 244 KSGI 247
>gi|168021243|ref|XP_001763151.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685634|gb|EDQ72028.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/281 (51%), Positives = 186/281 (66%), Gaps = 17/281 (6%)
Query: 14 NANGVFKKSKHESESGV-GSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNA---VAQMM 69
N N + +++ G G+++KPCTKFFST+GCP+GE CHFLH+ PGG + +A +
Sbjct: 30 NTNNIIVLDNVDNKDGSSGNRTKPCTKFFSTSGCPYGEGCHFLHFVPGGVQSMGGLAPLA 89
Query: 70 NLPQAVPAPSRNMAVPPPASN-GPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
N+ +R + + G + K+R+CNR ++ EGC+F DKCHFAHGE EL K
Sbjct: 90 NISSMGGGGARKVVGGVGLDDQGANLGGFKTRLCNRFDTPEGCRFSDKCHFAHGEKELRK 149
Query: 127 PIAISHDDPRAFGAVPGRMGGRYEP-PPAPGPAASFGASATAKISVDASLAGAIIGKGGV 185
P R G EP PP A SFGAS+TAKIS++ASLAGAIIGKGG+
Sbjct: 150 ---FGSGGPGGRDREASRFGSYREPTPPGMAAANSFGASSTAKISIEASLAGAIIGKGGI 206
Query: 186 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPAT 245
N+KQICR TGAKLSI++HE D LRN+E+EGSFEQIKQAS MVR +++ A+ PA
Sbjct: 207 NAKQICRLTGAKLSIKEHETDAGLRNVEMEGSFEQIKQASQMVRHVLIHRDSVPARPPAG 266
Query: 246 AGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A +S NFKTKLC NF+KG+CTFG+RCHFAHGA +LR
Sbjct: 267 A------VSHNFKTKLCENFSKGTCTFGERCHFAHGAEDLR 301
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
FKT+LC F C F D+CHFAHG ELRK
Sbjct: 118 FKTRLCNRFDTPEGCRFSDKCHFAHGEKELRK 149
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 60 GGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
G + + Q + + V ++ PPA K+++C + C FG++CHFAH
Sbjct: 237 GSFEQIKQASQMVRHVLIHRDSVPARPPAGAVSHNFKTKLCENFSKGT-CTFGERCHFAH 295
Query: 120 GEWELGKP 127
G +L P
Sbjct: 296 GAEDLRDP 303
>gi|15240145|ref|NP_196295.1| zinc finger CCCH domain-containing protein 52 [Arabidopsis
thaliana]
gi|75262408|sp|Q9FG30.1|C3H52_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 52;
Short=AtC3H52
gi|9759305|dbj|BAB09811.1| unnamed protein product [Arabidopsis thaliana]
gi|26451009|dbj|BAC42611.1| unknown protein [Arabidopsis thaliana]
gi|28950801|gb|AAO63324.1| At5g06770 [Arabidopsis thaliana]
gi|332003680|gb|AED91063.1| zinc finger CCCH domain-containing protein 52 [Arabidopsis
thaliana]
Length = 240
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/298 (52%), Positives = 183/298 (61%), Gaps = 67/298 (22%)
Query: 1 MDTRKRTKPETGI--NANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MD RKR +PE N+NG FK+SK E ES G+GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1 MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNA AQM NL V SRNM S GP
Sbjct: 61 HYVPGGYNAAAQMTNLRPPVSQVSRNMQ----GSGGPG---------------------- 94
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
GR GR + P GP + FGAS T+KISVDASL
Sbjct: 95 ---------------------------GRFSGRGD--PGSGPVSIFGAS-TSKISVDASL 124
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEG+FEQI AS MVRELI R+
Sbjct: 125 AGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGRL 184
Query: 236 GPAHAKNPATAGSAA---HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
G K P G HP SN+KTK+C ++KG+CT+GDRCHFAHG +ELR++ I
Sbjct: 185 GS--VKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239
>gi|21555233|gb|AAM63810.1| unknown [Arabidopsis thaliana]
Length = 240
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/298 (52%), Positives = 183/298 (61%), Gaps = 67/298 (22%)
Query: 1 MDTRKRTKPETGI--NANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFL 55
MD RKR +PE N+NG FK+SK E ES G+GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1 MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
HY PGGYNA AQM NL V SRNM S GP
Sbjct: 61 HYVPGGYNAAAQMKNLRPPVSQVSRNMQ----GSGGPG---------------------- 94
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
GR GR + P GP + FGAS T+KISVDASL
Sbjct: 95 ---------------------------GRFSGRGD--PGSGPVSIFGAS-TSKISVDASL 124
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
AGAIIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEG+FEQI AS MVRELI R+
Sbjct: 125 AGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGRL 184
Query: 236 GPAHAKNPATAGSAA---HPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
G K P G HP SN+KTK+C ++KG+CT+GDRCHFAHG +ELR++ I
Sbjct: 185 GS--VKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239
>gi|223948301|gb|ACN28234.1| unknown [Zea mays]
gi|407232660|gb|AFT82672.1| C3H18 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413954800|gb|AFW87449.1| hypothetical protein ZEAMMB73_769323 [Zea mays]
Length = 340
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 177/272 (65%), Gaps = 38/272 (13%)
Query: 42 STAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS---RNMAVPPPASNGPTVVKSR 98
STAGCPFG +CHFLH FPGGY AV++M NL M P +K+R
Sbjct: 81 STAGCPFGSNCHFLHNFPGGYLAVSKMTNLGGPPVPAPPGRMPMGPGGPDGPPSPALKTR 140
Query: 99 MCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPA 158
+CN+ N+AEGCK+G KCHFAHGE ELGKP+ + + MG PP PGP
Sbjct: 141 LCNKYNTAEGCKWGSKCHFAHGERELGKPLQMDNS-----------MGA---PPMGPGPN 186
Query: 159 ----------------ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
++FGASATAKISVDASLAGAIIGK G+N+K I R TGAKL+IRD
Sbjct: 187 GHFMPPPMPIPDMVPHSTFGASATAKISVDASLAGAIIGKSGINTKHISRVTGAKLAIRD 246
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELIVRIG---PAHAKNPATAGSAAHP--LSSNF 257
+EADPN +NIELEG+F+QIK ASAMV ELIVRI P AKN G +H +SNF
Sbjct: 247 NEADPNHKNIELEGTFDQIKHASAMVTELIVRISGKVPPQAKNNPGRGPGSHAGGPASNF 306
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
KTKLC NF KGSCTFGDRCHFAHG +ELRK A
Sbjct: 307 KTKLCENFNKGSCTFGDRCHFAHGESELRKPA 338
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 84 VPPPASNGP------------TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
VPP A N P + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 283 VPPQAKNNPGRGPGSHAGGPASNFKTKLCENFNKGS-CTFGDRCHFAHGESELRKPAA 339
>gi|297746399|emb|CBI16455.3| unnamed protein product [Vitis vinifera]
Length = 244
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/294 (58%), Positives = 188/294 (63%), Gaps = 66/294 (22%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
RKR + E +N NG FKKSK E ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 7 RKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 66
Query: 61 GYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
G AV+QM L
Sbjct: 67 GIKAVSQMWEL------------------------------------------------- 77
Query: 121 EWELGKPIAIS-HDDPRAFGAVPGRMGGRYE-PPPAPGPAASFGASATAKISVDASLAGA 178
GKP S H+D R G+ GR+ GR E PPP AASFGASATAKISVDASLAGA
Sbjct: 78 ----GKPTLPSHHEDHRGMGS--GRLAGRLEPPPPGLAAAASFGASATAKISVDASLAGA 131
Query: 179 IIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPA 238
IIGK GVNSKQICR TGAKLSI+DH++DPNLRNIELEG+F+QIKQASAMVRELIV I A
Sbjct: 132 IIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQASAMVRELIVNISSA 191
Query: 239 HA---KNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+NPA SAA ++NFKTKLC NF KGSCTFG+RCHFAHGA ELRK A
Sbjct: 192 SGPPMRNPAMQASAA---ANNFKTKLCENFTKGSCTFGERCHFAHGADELRKPA 242
>gi|148907986|gb|ABR17113.1| unknown [Picea sitchensis]
Length = 330
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/284 (55%), Positives = 194/284 (68%), Gaps = 32/284 (11%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPP 87
+G+GSKSK CTKFFST+GCP+GE CHF H+ GG N V Q+ +L A+ A S+ P
Sbjct: 56 TGLGSKSKACTKFFSTSGCPYGEGCHFQHHVQGGVNPVTQIPSLGSALGAASKKPVGVLP 115
Query: 88 ASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVP- 142
A PT+ K+R+C+ N+ EGC+FGDKCHFAHGE EL K A +H+ + P
Sbjct: 116 AE--PTLNASNYKTRLCSNYNTGEGCRFGDKCHFAHGEKELAKVNAPAHNLKDDWATGPF 173
Query: 143 --------------GRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK 188
GR G R PP AA+FGASATAKISVDA+LAG IIGKGG+NSK
Sbjct: 174 GSRFPVGGLDGKPVGRPGYREATPPGMAAAATFGASATAKISVDAALAGPIIGKGGINSK 233
Query: 189 QICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR---IGPAHAKNPAT 245
I R TGAKL+IRDHE+D NL+NIELEGSF+QIK+ASAMVR+LI+ + PA AK P+
Sbjct: 234 HISRATGAKLAIRDHESDTNLKNIELEGSFDQIKEASAMVRQLIMHTSAVLPA-AKQPSF 292
Query: 246 AGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
++NFKTKLC N+A+G+CTFGDRCHFAHGA+ELR +
Sbjct: 293 T-------TNNFKTKLCENYAQGTCTFGDRCHFAHGASELRDNS 329
>gi|148908247|gb|ABR17238.1| unknown [Picea sitchensis]
Length = 330
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/284 (55%), Positives = 194/284 (68%), Gaps = 32/284 (11%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPP 87
+G+GSKSK CTKFFST+GCP+GE CHF H+ GG N V Q+ +L A+ A S+ P
Sbjct: 56 TGLGSKSKACTKFFSTSGCPYGEGCHFQHHVQGGVNPVTQIPSLGSALGAASKKPVGVLP 115
Query: 88 ASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVP- 142
A PT+ K+R+C+ N+ EGC+FGDKCHFAHGE EL K A +H+ + P
Sbjct: 116 AE--PTLNASNYKTRLCSNYNTGEGCRFGDKCHFAHGEKELAKVNAPAHNLKDDWATGPF 173
Query: 143 --------------GRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK 188
GR G R PP AA+FGASATAKISVDA+LAG IIGKGG+NSK
Sbjct: 174 GSRFPVGGLDGKPVGRPGYREATPPGMAAAATFGASATAKISVDAALAGPIIGKGGINSK 233
Query: 189 QICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR---IGPAHAKNPAT 245
I R TGAKL+IRDHE+D NL+NIELEGSF+QIK+ASAMVR+LI+ + PA AK P+
Sbjct: 234 HISRATGAKLAIRDHESDTNLKNIELEGSFDQIKEASAMVRQLIMHTSAVLPA-AKQPSF 292
Query: 246 AGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
++NFKTKLC N+A+G+CTFGDRCHFAHGA+ELR +
Sbjct: 293 T-------TNNFKTKLCENYAQGTCTFGDRCHFAHGASELRDNS 329
>gi|9294110|dbj|BAB01961.1| unnamed protein product [Arabidopsis thaliana]
Length = 231
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 167/279 (59%), Gaps = 67/279 (24%)
Query: 22 SKHESES-GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSR 80
SK ES S G+GSKSKPCTKFFST+GCPFGE+CHFLHY PGGYNAV+QM N+ +P SR
Sbjct: 9 SKMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSR 68
Query: 81 NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGA 140
NM S G +F
Sbjct: 69 NMQ--------------------GSGNGGRF----------------------------- 79
Query: 141 VPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI 200
GR E P G ++FG SATA+ SVDASLAGAIIGKGGV+SKQICRQTG KLSI
Sbjct: 80 -----SGRGESGP--GHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSI 132
Query: 201 RDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAA---------H 251
+DHE DPNL+NI LEG+ EQI +ASAMV++LI R+ A K P H
Sbjct: 133 QDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPH 192
Query: 252 PLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
P SNFKTK+C F+KG+CTFGDRCHFAHG AELRK+ I
Sbjct: 193 P-GSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGI 230
>gi|414584921|tpg|DAA35492.1| TPA: hypothetical protein ZEAMMB73_089657 [Zea mays]
Length = 234
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 167/241 (69%), Gaps = 27/241 (11%)
Query: 68 MMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
M+NL AV APSR + A AS+ + VK+RMC + N+ EGCKFGDKCHFAH E E
Sbjct: 1 MLNLSSSAVSAPSRTHVDHAALTGASHPASTVKTRMCTKYNTTEGCKFGDKCHFAHSERE 60
Query: 124 LGKPIAISHDDPRAFGAVPGRMGGRY---EP--PPAPGP-AASFGASATAKISVDASLAG 177
L KP +S + P MGGRY EP P A GP A +FGASATAKISVDASLAG
Sbjct: 61 LAKPAYMSQEGPP--------MGGRYGRAEPMQPAAMGPPAGNFGASATAKISVDASLAG 112
Query: 178 AIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 237
IIGKGGVN+KQI R TG KLSIRDHE++PNL+NIELEG+F+QIKQAS +VR+LI I
Sbjct: 113 GIIGKGGVNTKQISRITGVKLSIRDHESNPNLKNIELEGNFDQIKQASDLVRDLIATISA 172
Query: 238 AH-AKNPATAGSAAHPL--------SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
+ AKNP+ A + A SSN+KTKLC NF KG+CTFGDRCHFAHG E R+
Sbjct: 173 SMPAKNPSAAAAPAGGGRGGGPGGKSSNYKTKLCENFLKGACTFGDRCHFAHGETEQRRG 232
Query: 289 A 289
A
Sbjct: 233 A 233
>gi|297739844|emb|CBI30026.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 146/206 (70%), Gaps = 13/206 (6%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAP 155
KS+ C + S GC FG+ CHF H + G A++ +A P PPP P
Sbjct: 36 KSKPCTKFFSTSGCPFGESCHFLH--YVPGGYNAVAQMTNQAPILPPASRNMAGPPPPVP 93
Query: 156 G---------PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEAD 206
PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR+H++D
Sbjct: 94 NGSSMPAVKSPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIREHDSD 153
Query: 207 PNLRNIELEGSFEQIKQASAMVRELIVRIG--PAHAKNPATAGSAAHPLSSNFKTKLCGN 264
PNLRNIELEG+FEQIK+ASAMVRELIV I P HA+ A G P +SN+KTKLC N
Sbjct: 154 PNLRNIELEGTFEQIKEASAMVRELIVNISAMPGHARTTAMPGGGQAPPASNYKTKLCDN 213
Query: 265 FAKGSCTFGDRCHFAHGAAELRKTAI 290
F KGSCTFG+RCHFAHGA ELRK+AI
Sbjct: 214 FTKGSCTFGERCHFAHGAGELRKSAI 239
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR +P +NANG FKKSK E ES G+GSKSKPCTKFFST+GCPFGESCHFLHY
Sbjct: 1 MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPP 87
PGGYNAVAQM N +P SRNMA PPP
Sbjct: 61 VPGGYNAVAQMTNQAPILPPASRNMAGPPP 90
>gi|413919850|gb|AFW59782.1| hypothetical protein ZEAMMB73_426194 [Zea mays]
Length = 233
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 163/237 (68%), Gaps = 18/237 (7%)
Query: 68 MMNLPQ-AVPAPSR---NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
M+NL AV APSR + A S+ + K+RMC + N+ EGC+FGDKCHFAH E E
Sbjct: 1 MLNLGSPAVSAPSRTHVDHAALTGTSHSASSGKTRMCTKYNTTEGCRFGDKCHFAHSERE 60
Query: 124 LGKPIAISHDDPRAFGAVPGRMGGRYEP--PPAPGP-AASFGASATAKISVDASLAGAII 180
LGKP + + +P + GR GGR EP P A GP A +FGASATAKISVDASLAG II
Sbjct: 61 LGKPAYMPYGEP----PMGGRFGGRPEPVQPAAMGPPAGNFGASATAKISVDASLAGGII 116
Query: 181 GKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAH- 239
GKGGVN+KQI R TG KL IRDHE+ PNL+NIELEG+F+QIKQA MVR+LI I +
Sbjct: 117 GKGGVNTKQISRVTGVKLCIRDHESSPNLKNIELEGNFDQIKQAGEMVRDLIATISTSMP 176
Query: 240 AKNPATAGSAAHPLS------SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
AKN + A + A SN+KTKLC NFAKG+CTFG+RCHFAHG E R A+
Sbjct: 177 AKNSSAAVAPAGGRGGGLGSKSNYKTKLCENFAKGACTFGERCHFAHGENEQRSGAV 233
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLH---------YFPGGYNAVAQMMNLPQAVP 76
S S K++ CTK+ +T GC FG+ CHF H Y P G + P
Sbjct: 26 SHSASSGKTRMCTKYNTTEGCRFGDKCHFAHSERELGKPAYMPYGEPPMGGRFG---GRP 82
Query: 77 APSRNMAVPPPASN 90
P + A+ PPA N
Sbjct: 83 EPVQPAAMGPPAGN 96
>gi|168023386|ref|XP_001764219.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684659|gb|EDQ71060.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 176/285 (61%), Gaps = 35/285 (12%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSR------- 80
S +GSK+KPCTKFFST+GCP+GE CHFLH PGG A+ +M L AV P+
Sbjct: 8 SALGSKTKPCTKFFSTSGCPYGEGCHFLHCVPGGIAALG-LMPLGVAVGTPTALTPTSGM 66
Query: 81 ---------NMAVPPPA-SNGPTVV----KSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
N + P P S P+V K+R+CN+ ++ EGC+FGDKCHFAHGE +L +
Sbjct: 67 RTVMGGFGPNSSTPLPGGSPDPSVTVGGYKTRLCNKFSTPEGCRFGDKCHFAHGESDL-R 125
Query: 127 PIAISHDDPRAFGAVPGRMGGRY-EPPP---APGPAASFGA-SATAKISVDASLAGAIIG 181
P ++ + P Y EP P P AA FG S K+S++A LAGAIIG
Sbjct: 126 PSNAAYANGGTHLLPPVATAIYYGEPTPPGVMPATAAGFGLNSGNLKMSIEAVLAGAIIG 185
Query: 182 KGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAK 241
K G N KQI R TG KL+IRDHE++ ++RN+E+EG++EQI++AS MVR+ + +
Sbjct: 186 KAGANVKQISRLTGCKLTIRDHESNASMRNVEMEGTYEQIERASEMVRQFLSHKEVVPQR 245
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A A S NFKTKLC NF++G+CTF DRCHFAHG +ELR
Sbjct: 246 VAAIA-------SHNFKTKLCENFSQGTCTFADRCHFAHGTSELR 283
>gi|223949077|gb|ACN28622.1| unknown [Zea mays]
gi|413954801|gb|AFW87450.1| hypothetical protein ZEAMMB73_769323 [Zea mays]
Length = 234
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 149/216 (68%), Gaps = 35/216 (16%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPA 154
+K+R+CN+ N+AEGCK+G KCHFAHGE ELGKP+ + + MG PP
Sbjct: 31 LKTRLCNKYNTAEGCKWGSKCHFAHGERELGKPLQMDNS-----------MGA---PPMG 76
Query: 155 PGPA----------------ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL 198
PGP ++FGASATAKISVDASLAGAIIGK G+N+K I R TGAKL
Sbjct: 77 PGPNGHFMPPPMPIPDMVPHSTFGASATAKISVDASLAGAIIGKSGINTKHISRVTGAKL 136
Query: 199 SIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG---PAHAKNPATAGSAAHP--L 253
+IRD+EADPN +NIELEG+F+QIK ASAMV ELIVRI P AKN G +H
Sbjct: 137 AIRDNEADPNHKNIELEGTFDQIKHASAMVTELIVRISGKVPPQAKNNPGRGPGSHAGGP 196
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+SNFKTKLC NF KGSCTFGDRCHFAHG +ELRK A
Sbjct: 197 ASNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPA 232
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 84 VPPPASNGP------------TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
VPP A N P + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 177 VPPQAKNNPGRGPGSHAGGPASNFKTKLCENFNKGS-CTFGDRCHFAHGESELRKPAA 233
>gi|413943642|gb|AFW76291.1| hypothetical protein ZEAMMB73_850778 [Zea mays]
Length = 234
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 144/202 (71%), Gaps = 7/202 (3%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAIS--HDDPRAFGAVPGRMGGRYEPP 152
VK+RMCN+ N+AEGCK+G KCHFAHGE ELGKP+ + P G P
Sbjct: 31 VKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPLQMDNPMGPPPMGPGPNGHFMPPPMPF 90
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNI 212
P P ++FGASATAKISVDASLAGAIIGKGG N+K I R TGAKL+IRD+EADPN +NI
Sbjct: 91 PDMVPPSTFGASATAKISVDASLAGAIIGKGGTNTKHISRVTGAKLAIRDNEADPNHKNI 150
Query: 213 ELEGSFEQIKQASAMVRELIVRIG---PAHAKNPATAGSAAHPL--SSNFKTKLCGNFAK 267
ELEG+F+QIK ASAMV ELIVRI P AKN G +H SNFKTKLC NF K
Sbjct: 151 ELEGTFDQIKHASAMVTELIVRISGKPPPQAKNNPGRGPGSHAGGPGSNFKTKLCENFNK 210
Query: 268 GSCTFGDRCHFAHGAAELRKTA 289
GSCTFGDRCHFAHG ELRK A
Sbjct: 211 GSCTFGDRCHFAHGEGELRKPA 232
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 72 PQAVPAPSRNMAVPPPASNGP-TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
PQA P R P + GP + K+++C N C FGD+CHFAHGE EL KP A
Sbjct: 179 PQAKNNPGRG---PGSHAGGPGSNFKTKLCENFNKGS-CTFGDRCHFAHGEGELRKPAA 233
>gi|226231182|gb|ACO39584.1| hypothetical protein [Populus balsamifera]
gi|226231184|gb|ACO39585.1| hypothetical protein [Populus balsamifera]
gi|226231186|gb|ACO39586.1| hypothetical protein [Populus balsamifera]
gi|226231188|gb|ACO39587.1| hypothetical protein [Populus balsamifera]
gi|226231190|gb|ACO39588.1| hypothetical protein [Populus balsamifera]
gi|226231192|gb|ACO39589.1| hypothetical protein [Populus balsamifera]
gi|226231194|gb|ACO39590.1| hypothetical protein [Populus balsamifera]
gi|226231196|gb|ACO39591.1| hypothetical protein [Populus balsamifera]
gi|226231198|gb|ACO39592.1| hypothetical protein [Populus balsamifera]
gi|226231200|gb|ACO39593.1| hypothetical protein [Populus balsamifera]
gi|226231202|gb|ACO39594.1| hypothetical protein [Populus balsamifera]
gi|226231204|gb|ACO39595.1| hypothetical protein [Populus balsamifera]
gi|226231206|gb|ACO39596.1| hypothetical protein [Populus balsamifera]
gi|226231208|gb|ACO39597.1| hypothetical protein [Populus balsamifera]
gi|226231210|gb|ACO39598.1| hypothetical protein [Populus balsamifera]
gi|226231212|gb|ACO39599.1| hypothetical protein [Populus balsamifera]
gi|226231214|gb|ACO39600.1| hypothetical protein [Populus balsamifera]
gi|226231216|gb|ACO39601.1| hypothetical protein [Populus balsamifera]
gi|226231218|gb|ACO39602.1| hypothetical protein [Populus balsamifera]
gi|226231220|gb|ACO39603.1| hypothetical protein [Populus balsamifera]
gi|226231222|gb|ACO39604.1| hypothetical protein [Populus balsamifera]
gi|226231224|gb|ACO39605.1| hypothetical protein [Populus balsamifera]
gi|226231226|gb|ACO39606.1| hypothetical protein [Populus balsamifera]
gi|226231228|gb|ACO39607.1| hypothetical protein [Populus balsamifera]
gi|226231230|gb|ACO39608.1| hypothetical protein [Populus balsamifera]
gi|226231232|gb|ACO39609.1| hypothetical protein [Populus balsamifera]
gi|226231234|gb|ACO39610.1| hypothetical protein [Populus balsamifera]
gi|226231236|gb|ACO39611.1| hypothetical protein [Populus balsamifera]
gi|226231238|gb|ACO39612.1| hypothetical protein [Populus balsamifera]
gi|226231240|gb|ACO39613.1| hypothetical protein [Populus balsamifera]
gi|226231242|gb|ACO39614.1| hypothetical protein [Populus balsamifera]
gi|226231244|gb|ACO39615.1| hypothetical protein [Populus balsamifera]
gi|226231246|gb|ACO39616.1| hypothetical protein [Populus balsamifera]
gi|226231248|gb|ACO39617.1| hypothetical protein [Populus balsamifera]
gi|226231250|gb|ACO39618.1| hypothetical protein [Populus balsamifera]
gi|226231252|gb|ACO39619.1| hypothetical protein [Populus balsamifera]
gi|226231254|gb|ACO39620.1| hypothetical protein [Populus balsamifera]
gi|226231256|gb|ACO39621.1| hypothetical protein [Populus balsamifera]
gi|226231258|gb|ACO39622.1| hypothetical protein [Populus balsamifera]
gi|226231260|gb|ACO39623.1| hypothetical protein [Populus balsamifera]
gi|226231262|gb|ACO39624.1| hypothetical protein [Populus balsamifera]
gi|226231264|gb|ACO39625.1| hypothetical protein [Populus balsamifera]
gi|226231266|gb|ACO39626.1| hypothetical protein [Populus balsamifera]
gi|226231268|gb|ACO39627.1| hypothetical protein [Populus balsamifera]
gi|226231270|gb|ACO39628.1| hypothetical protein [Populus balsamifera]
gi|226231272|gb|ACO39629.1| hypothetical protein [Populus balsamifera]
gi|226231274|gb|ACO39630.1| hypothetical protein [Populus balsamifera]
gi|226231276|gb|ACO39631.1| hypothetical protein [Populus balsamifera]
gi|226231278|gb|ACO39632.1| hypothetical protein [Populus balsamifera]
gi|226231280|gb|ACO39633.1| hypothetical protein [Populus balsamifera]
gi|226231282|gb|ACO39634.1| hypothetical protein [Populus balsamifera]
gi|226231284|gb|ACO39635.1| hypothetical protein [Populus balsamifera]
gi|226231286|gb|ACO39636.1| hypothetical protein [Populus balsamifera]
gi|226231288|gb|ACO39637.1| hypothetical protein [Populus balsamifera]
gi|226231290|gb|ACO39638.1| hypothetical protein [Populus balsamifera]
gi|226231292|gb|ACO39639.1| hypothetical protein [Populus balsamifera]
gi|226231294|gb|ACO39640.1| hypothetical protein [Populus balsamifera]
gi|226231296|gb|ACO39641.1| hypothetical protein [Populus balsamifera]
gi|226231298|gb|ACO39642.1| hypothetical protein [Populus balsamifera]
gi|226231300|gb|ACO39643.1| hypothetical protein [Populus balsamifera]
gi|226231302|gb|ACO39644.1| hypothetical protein [Populus balsamifera]
gi|226231304|gb|ACO39645.1| hypothetical protein [Populus balsamifera]
gi|226231306|gb|ACO39646.1| hypothetical protein [Populus balsamifera]
gi|226231308|gb|ACO39647.1| hypothetical protein [Populus balsamifera]
gi|226231310|gb|ACO39648.1| hypothetical protein [Populus balsamifera]
gi|226231312|gb|ACO39649.1| hypothetical protein [Populus balsamifera]
gi|226231314|gb|ACO39650.1| hypothetical protein [Populus balsamifera]
gi|226231316|gb|ACO39651.1| hypothetical protein [Populus balsamifera]
gi|226231318|gb|ACO39652.1| hypothetical protein [Populus balsamifera]
gi|226231322|gb|ACO39654.1| hypothetical protein [Populus balsamifera]
gi|226231324|gb|ACO39655.1| hypothetical protein [Populus balsamifera]
gi|226231326|gb|ACO39656.1| hypothetical protein [Populus balsamifera]
gi|226231328|gb|ACO39657.1| hypothetical protein [Populus balsamifera]
gi|226231330|gb|ACO39658.1| hypothetical protein [Populus balsamifera]
gi|226231332|gb|ACO39659.1| hypothetical protein [Populus balsamifera]
gi|226231334|gb|ACO39660.1| hypothetical protein [Populus balsamifera]
gi|226231336|gb|ACO39661.1| hypothetical protein [Populus balsamifera]
gi|226231338|gb|ACO39662.1| hypothetical protein [Populus balsamifera]
gi|226231340|gb|ACO39663.1| hypothetical protein [Populus balsamifera]
gi|226231342|gb|ACO39664.1| hypothetical protein [Populus balsamifera]
gi|226231344|gb|ACO39665.1| hypothetical protein [Populus balsamifera]
gi|226231346|gb|ACO39666.1| hypothetical protein [Populus balsamifera]
gi|226231348|gb|ACO39667.1| hypothetical protein [Populus balsamifera]
gi|226231350|gb|ACO39668.1| hypothetical protein [Populus balsamifera]
gi|226231352|gb|ACO39669.1| hypothetical protein [Populus balsamifera]
gi|226231354|gb|ACO39670.1| hypothetical protein [Populus balsamifera]
gi|226231356|gb|ACO39671.1| hypothetical protein [Populus balsamifera]
gi|226231358|gb|ACO39672.1| hypothetical protein [Populus balsamifera]
gi|226231360|gb|ACO39673.1| hypothetical protein [Populus balsamifera]
gi|226231362|gb|ACO39674.1| hypothetical protein [Populus balsamifera]
gi|226231364|gb|ACO39675.1| hypothetical protein [Populus balsamifera]
Length = 172
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 130/175 (74%), Gaps = 8/175 (4%)
Query: 102 RLNSAEGCKFGDKCHFAHGEWELGKPIAI-SHDDPRAFGAVPGRMGGRYEPP-PAPGPAA 159
+ N+ EGCKFGDKCHFAHGEWELGK A S++DPRA G +PGRM E P G AA
Sbjct: 1 KYNTVEGCKFGDKCHFAHGEWELGKASAAPSYEDPRAMGPIPGRMSRHMEHPHQGHGAAA 60
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFE 219
SFG+SAT KIS+DASLAGAIIGK GVNSK ICR TGAKLSIRDHEADP R+IELEGSF+
Sbjct: 61 SFGSSATTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFD 120
Query: 220 QIKQASAMVRELIVRIGPAHA---KNPATAGSAAHPLSSNFKTKLCGNFAKGSCT 271
QI QAS MVR+LI +G A KN A S S+NFKTK+C NF KGSCT
Sbjct: 121 QISQASDMVRQLISNVGQASGPPIKNQAMHSSGG---SNNFKTKICENFNKGSCT 172
>gi|226231320|gb|ACO39653.1| hypothetical protein [Populus balsamifera]
Length = 172
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/174 (66%), Positives = 129/174 (74%), Gaps = 6/174 (3%)
Query: 102 RLNSAEGCKFGDKCHFAHGEWELGKPIAI-SHDDPRAFGAVPGRMGGRYEPP-PAPGPAA 159
+ N+ EGCKFGDKCHFAHGEWELGK A S++DPRA G +PGRM E P G AA
Sbjct: 1 KYNTVEGCKFGDKCHFAHGEWELGKASAAPSYEDPRAMGPIPGRMSRHMEHPHQGHGAAA 60
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFE 219
SFG+SAT KIS+DASLAGAIIGK GVNSK ICR TGAKLSIRDHEADP R+IELEGSF+
Sbjct: 61 SFGSSATTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFD 120
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAAHPL--SSNFKTKLCGNFAKGSCT 271
QI QAS MVR+LI +G A P A H S+NFKTK+C NF KGSCT
Sbjct: 121 QISQASDMVRQLISNVG--QASGPPIKIQAMHSSGGSNNFKTKICENFNKGSCT 172
>gi|357139280|ref|XP_003571211.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Brachypodium distachyon]
Length = 233
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 143/219 (65%), Gaps = 14/219 (6%)
Query: 82 MAVPPPASNGPTV--VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFG 139
M + P NGP+ VK+R+C N+AEGCK+GDKCHFAH E ELGK + P G
Sbjct: 16 MPMRPAVPNGPSTSTVKTRLCRNYNTAEGCKWGDKCHFAHAERELGKHTFMDSSVPPHMG 75
Query: 140 AVPGRMGGRYEPPPAPGPA----ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTG 195
P + PP P P ASFGASATAKISVDA LAGAIIG+GG+N+K I + TG
Sbjct: 76 PRPT---SHFAPPAMPNPGMFTPASFGASATAKISVDAFLAGAIIGRGGMNTKLISQITG 132
Query: 196 AKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPL-- 253
AKL+IRDHE+D +++NIEL G+F+QIK A VRELIV G +A P + L
Sbjct: 133 AKLAIRDHESDASVKNIELRGTFDQIKNAGTKVRELIVSFGVNNAPPPGRNSAGGSHLIG 192
Query: 254 ---SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
S+FKTKLC NFA+G CT+ D+C FAHG ELRK+A
Sbjct: 193 GVPRSSFKTKLCENFARGLCTYNDKCRFAHGENELRKSA 231
>gi|224091631|ref|XP_002309309.1| predicted protein [Populus trichocarpa]
gi|222855285|gb|EEE92832.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 137/200 (68%), Gaps = 8/200 (4%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAH----GEWELGKPIAISHDDPRAFGAVPGRMGGRYEP 151
K + C + S GC FG+ CHF H G + + + + +VPG +GGR E
Sbjct: 36 KLKPCTKFFSTAGCPFGESCHFLHHVPGGYNAVTQMMNLGPTVTPPSRSVPGHLGGRVEQ 95
Query: 152 PPAPGPAASFGASATA-KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLR 210
P +PGPA SFG AT +ISV+ASLAG IIGKGGV+S QIC QTG KLSI++HE +PNL+
Sbjct: 96 P-SPGPATSFGVFATTTRISVNASLAGFIIGKGGVHSIQICHQTGVKLSIKEHETNPNLK 154
Query: 211 NIELEGSFEQIKQASAMVRELI-VRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGS 269
NIELEGSFEQI QAS MV EL+ V A AK G A+P SN+KTKLC NFAKGS
Sbjct: 155 NIELEGSFEQIAQASKMVEELVKVNSAKAAAKTSGGRGGHANP-GSNYKTKLCDNFAKGS 213
Query: 270 CTFGDRCHFAHGAAELRKTA 289
CTFG RCHFAHGAAELRKTA
Sbjct: 214 CTFGQRCHFAHGAAELRKTA 233
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESE---SGVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MDTRKR +P+ N G FKKSK E + +GVGSK KPCTKFFSTAGCPFGESCHFLH+
Sbjct: 1 MDTRKRGRPDFKTNGFGGFKKSKQEMDPLSTGVGSKLKPCTKFFSTAGCPFGESCHFLHH 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNM 82
PGGYNAV QMMNL V PSR++
Sbjct: 61 VPGGYNAVTQMMNLGPTVTPPSRSV 85
>gi|255638660|gb|ACU19635.1| unknown [Glycine max]
Length = 202
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 146/191 (76%), Gaps = 11/191 (5%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR + E N NG KKS+ E +S G+GSKSKPCTKFFST+GCPFGE CHFLHY
Sbjct: 1 MD-RKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHY 59
Query: 58 FPGGYNAVAQMMNLPQ--AVPAPSRNMAVPP--PASNGPTVVKSRMCNRLNSAEGCKFGD 113
PGG+ AV+Q++N+ +P RN VPP P + P VVK+R+CN+ N+AEGCKFGD
Sbjct: 60 VPGGFKAVSQLINVGSNPVIPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGD 118
Query: 114 KCHFAHGEWELGKPIAISHDDPRAFGAVP-GRMGGRYEPP-PAPGPAASFGASATAKISV 171
KCHFAHGEWELG+P A S++DPR G +P R+GGR EPP PA G AASFGASATAKIS+
Sbjct: 119 KCHFAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISI 178
Query: 172 DASLAGAIIGK 182
+ASLAGA+IGK
Sbjct: 179 NASLAGAVIGK 189
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 258 KTKLCGNFAKGS-CTFGDRCHFAHGAAEL-RKTA 289
KT+LC F C FGD+CHFAHG EL R TA
Sbjct: 101 KTRLCNKFNTAEGCKFGDKCHFAHGEWELGRPTA 134
>gi|255639622|gb|ACU20105.1| unknown [Glycine max]
Length = 174
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 111/145 (76%), Gaps = 6/145 (4%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD RKR + ETG + NG FK+SK E ES GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1 MDIRKRGRHETGFSLNGGFKRSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60
Query: 58 FPGGYNAVAQMMNL-PQAVPAPSRNMAVPPPASNG--PTVVKSRMCNRLNSAEGCKFGDK 114
PGGYNAVA MMNL P A P PSRN+A P NG P+ VK+R+CN+ N+AEGCKFGDK
Sbjct: 61 VPGGYNAVAHMMNLTPAAPPPPSRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFGDK 120
Query: 115 CHFAHGEWELGKPIAISHDDPRAFG 139
CHFAHGEWELGK IA DD A G
Sbjct: 121 CHFAHGEWELGKHIAPPFDDHHAMG 145
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFAKGS-CTFGDRCHFAHGAAELRK 287
S KT++C F C FGD+CHFAHG EL K
Sbjct: 99 SAVKTRICNKFNTAEGCKFGDKCHFAHGEWELGK 132
>gi|297741221|emb|CBI32172.3| unnamed protein product [Vitis vinifera]
Length = 240
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 142/208 (68%), Gaps = 24/208 (11%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAH---GEWELGKPIAISHDDPRAFGAVPGRMGGRYEPP 152
KS+ C + S GC FG+ CHF H G + + +P A+P PP
Sbjct: 38 KSKPCTKFFSTSGCPFGEGCHFLHYVPGGYSAVTQMTNLGGNP----AMPPIARNPMAPP 93
Query: 153 PAPG-----------PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR 201
P AASFGASATAKISVDASLAGAIIGKGGVNSKQICR TG KLSI+
Sbjct: 94 TIPDGPPTAPPPGLAAAASFGASATAKISVDASLAGAIIGKGGVNSKQICRLTGVKLSIK 153
Query: 202 DHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPA--HAKNPATAGSAAHPLSSNFKT 259
+HE+DPN RNIELEG+F+QIKQASAMVRELI IG A HAKNP GSAA ++NFKT
Sbjct: 154 EHESDPNQRNIELEGTFDQIKQASAMVRELIFNIGSAAGHAKNP--TGSAAS--ANNFKT 209
Query: 260 KLCGNFAKGSCTFGDRCHFAHGAAELRK 287
K+C NFAKGSCTFGDRCHFAHGA ELRK
Sbjct: 210 KMCDNFAKGSCTFGDRCHFAHGANELRK 237
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
Query: 4 RKRTKPETGINANGVFKKSKHESES---GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG 60
++R +P+ NG FKKSK E+ES G+GSKSKPCTKFFST+GCPFGE CHFLHY PG
Sbjct: 6 KRRGRPDGAAFGNGGFKKSKQETESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 65
Query: 61 GYNAVAQMMNL--PQAVPAPSRNMAVPPPASNG 91
GY+AV QM NL A+P +RN PP +G
Sbjct: 66 GYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDG 98
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC+ N A+G C FGD+CHFAHG EL KP+A
Sbjct: 208 KTKMCD--NFAKGSCTFGDRCHFAHGANELRKPVA 240
>gi|302755562|ref|XP_002961205.1| hypothetical protein SELMODRAFT_75886 [Selaginella moellendorffii]
gi|302766770|ref|XP_002966805.1| hypothetical protein SELMODRAFT_86553 [Selaginella moellendorffii]
gi|300164796|gb|EFJ31404.1| hypothetical protein SELMODRAFT_86553 [Selaginella moellendorffii]
gi|300172144|gb|EFJ38744.1| hypothetical protein SELMODRAFT_75886 [Selaginella moellendorffii]
Length = 213
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 146/263 (55%), Gaps = 59/263 (22%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
+ S +GSK+KPCTKFFST+GCP+GE CHFLHY PGG N+ + N A + +
Sbjct: 5 QQTSALGSKTKPCTKFFSTSGCPYGEGCHFLHYVPGGINS---LQNGATAGIGGAAALI- 60
Query: 85 PPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGR 144
NG TV S P+A S +G
Sbjct: 61 -----NGTTVFSS----------------------------NPVATS----VYYG----- 78
Query: 145 MGGRYEPPPAPGPAA-SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH 203
EP P PAA +FG+ + ++S++A+ AGAIIGK G N KQI + TG K+SIRDH
Sbjct: 79 -----EPTPPGVPAATTFGSISVTRMSIEAAYAGAIIGKAGANVKQISKVTGCKVSIRDH 133
Query: 204 EADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCG 263
E DPN+RN+E+EGS EQI+ AS MVR+L+ A + PA S NFKTKLC
Sbjct: 134 ETDPNMRNVEMEGSLEQIESASEMVRQLLQTREVAPPRGPALG-------SHNFKTKLCE 186
Query: 264 NFAKGSCTFGDRCHFAHGAAELR 286
N++ G+CTF +RCHFAHG ELR
Sbjct: 187 NYSSGTCTFAERCHFAHGTQELR 209
>gi|357138984|ref|XP_003571066.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Brachypodium distachyon]
Length = 455
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 155/276 (56%), Gaps = 56/276 (20%)
Query: 20 KKSKHESESGVGSKSK-PCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAP 78
++ + S G++SK PCT+FFSTAGC FGE+C F+HYFPG Y A A P
Sbjct: 116 QRPREPESSQTGARSKWPCTRFFSTAGCCFGENCRFIHYFPGSYQAPAD----------P 165
Query: 79 SRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAF 138
R++ S GP V + E +LGK ++ + P
Sbjct: 166 PRSI------SWGPAVPDDSLTQT-----------------AERKLGKYMSKDNSVPLLR 202
Query: 139 GAVPGRMGGRYEPPPAP----GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQT 194
P P AP AASFGASATAKISV ASLAGAIIG+GGVN KQI R +
Sbjct: 203 EQRPT---DHCTPQQAPIHGTVSAASFGASATAKISVAASLAGAIIGRGGVNIKQISRDS 259
Query: 195 GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLS 254
GAK+ I+ HE+D L+N+EL+G+F+QIK+AS MV ELI IG A
Sbjct: 260 GAKVRIQHHESDSKLKNVELQGTFDQIKKASTMVMELIG-IGSETA-------------- 304
Query: 255 SNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
SNFKTKLCG+FA+GSCT+GD C AH +ELRK AI
Sbjct: 305 SNFKTKLCGHFARGSCTYGDNCRSAHSMSELRKPAI 340
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFAKG-SCTFGDRCHFAHGAAELRK 287
S+FKT++C FA G SC FGD+CHF HG ELRK
Sbjct: 416 SSFKTRMCEGFAAGGSCAFGDKCHFPHGQDELRK 449
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
K+RMC + C FGDKCHF HG+ EL KP
Sbjct: 419 KTRMCEGFAAGGSCAFGDKCHFPHGQDELRKP 450
>gi|219884777|gb|ACL52763.1| unknown [Zea mays]
Length = 358
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Query: 1 MD-TRKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD +RKR E G + G ++ +SGVGSK K CT FFST GCPFGE CHF+HY
Sbjct: 1 MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCH 116
FPG Y AV++M NL A AP M + P PT VVK+R+CN+ N+AEGCK+GD+CH
Sbjct: 61 FPGDYRAVSEMTNLGGATIAPPGGMMMDGP----PTPVVKTRLCNKYNTAEGCKWGDRCH 116
Query: 117 FAHGEWELGKPI 128
FAHGE ELGK +
Sbjct: 117 FAHGESELGKSM 128
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 97/139 (69%), Gaps = 17/139 (12%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD--HEADPNLR 210
P ASFGA ATAKISVDASLAG IIGKGG N KQI TGAK+ I++ HE+D +L+
Sbjct: 233 PGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLK 292
Query: 211 NIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSC 270
NIE EG+F+QI+ ASAMV ELIV I + SNFKTK+C NFAKGSC
Sbjct: 293 NIEFEGTFDQIRNASAMVIELIVSISG---------------IGSNFKTKMCENFAKGSC 337
Query: 271 TFGDRCHFAHGAAELRKTA 289
++G +CHFAHG +ELRK A
Sbjct: 338 SYGGKCHFAHGESELRKPA 356
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 258 KTKLCG--NFAKGSCTFGDRCHFAHGAAELRKTAI 290
KT+LC N A+G C +GDRCHFAHG +EL K+ +
Sbjct: 96 KTRLCNKYNTAEG-CKWGDRCHFAHGESELGKSMM 129
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC N A+G C +G KCHFAHGE EL KP A
Sbjct: 325 KTKMCE--NFAKGSCSYGGKCHFAHGESELRKPAA 357
>gi|413926279|gb|AFW66211.1| hypothetical protein ZEAMMB73_084342 [Zea mays]
Length = 358
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Query: 1 MD-TRKRTKPET--GINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHY 57
MD +RKR E G + G ++ +SGVGSK K CT FFST GCPFGE CHF+HY
Sbjct: 1 MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHY 60
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCH 116
FPG Y AV++M NL A AP M + P PT +VK+R+CN+ N+AEGCK+GD+CH
Sbjct: 61 FPGDYRAVSEMTNLGGATIAPPGGMMMDGP----PTPIVKTRLCNKYNTAEGCKWGDRCH 116
Query: 117 FAHGEWELGKPI 128
FAHGE ELGK +
Sbjct: 117 FAHGESELGKSM 128
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 97/139 (69%), Gaps = 17/139 (12%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD--HEADPNLR 210
P ASFGA ATAKISVDASLAG IIGKGG N KQI TGAK+ I++ HE+D +L+
Sbjct: 233 PGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLK 292
Query: 211 NIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSC 270
NIE EG+F+QI+ ASAMV ELIV I + SNFKTK+C NFAKGSC
Sbjct: 293 NIEFEGTFDQIRNASAMVIELIVSISG---------------IGSNFKTKMCENFAKGSC 337
Query: 271 TFGDRCHFAHGAAELRKTA 289
++G +CHFAHG +ELRK A
Sbjct: 338 SYGGKCHFAHGESELRKPA 356
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 258 KTKLCG--NFAKGSCTFGDRCHFAHGAAELRKTAI 290
KT+LC N A+G C +GDRCHFAHG +EL K+ +
Sbjct: 96 KTRLCNKYNTAEG-CKWGDRCHFAHGESELGKSMM 129
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC N A+G C +G KCHFAHGE EL KP A
Sbjct: 325 KTKMCE--NFAKGSCSYGGKCHFAHGESELRKPAA 357
>gi|224031983|gb|ACN35067.1| unknown [Zea mays]
gi|413926277|gb|AFW66209.1| hypothetical protein ZEAMMB73_084342 [Zea mays]
Length = 288
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 97/139 (69%), Gaps = 17/139 (12%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD--HEADPNLR 210
P ASFGA ATAKISVDASLAG IIGKGG N KQI TGAK+ I++ HE+D +L+
Sbjct: 163 PGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLK 222
Query: 211 NIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSC 270
NIE EG+F+QI+ ASAMV ELIV I + SNFKTK+C NFAKGSC
Sbjct: 223 NIEFEGTFDQIRNASAMVIELIVSISG---------------IGSNFKTKMCENFAKGSC 267
Query: 271 TFGDRCHFAHGAAELRKTA 289
++G +CHFAHG +ELRK A
Sbjct: 268 SYGGKCHFAHGESELRKPA 286
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 5/62 (8%)
Query: 68 MMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
M NL A AP M + P PT +VK+R+CN+ N+AEGCK+GD+CHFAHGE ELGK
Sbjct: 1 MTNLGGATIAPPGGMMMDGP----PTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGK 56
Query: 127 PI 128
+
Sbjct: 57 SM 58
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 258 KTKLCG--NFAKGSCTFGDRCHFAHGAAELRKTAI 290
KT+LC N A+G C +GDRCHFAHG +EL K+ +
Sbjct: 26 KTRLCNKYNTAEG-CKWGDRCHFAHGESELGKSMM 59
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC N A+G C +G KCHFAHGE EL KP A
Sbjct: 255 KTKMCE--NFAKGSCSYGGKCHFAHGESELRKPAA 287
>gi|212723152|ref|NP_001132006.1| hypothetical protein precursor [Zea mays]
gi|194693178|gb|ACF80673.1| unknown [Zea mays]
gi|407232608|gb|AFT82646.1| C3H38 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413926278|gb|AFW66210.1| hypothetical protein ZEAMMB73_084342 [Zea mays]
Length = 328
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 97/139 (69%), Gaps = 17/139 (12%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD--HEADPNLR 210
P ASFGA ATAKISVDASLAG IIGKGG N KQI TGAK+ I++ HE+D +L+
Sbjct: 203 PGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLK 262
Query: 211 NIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSC 270
NIE EG+F+QI+ ASAMV ELIV I + SNFKTK+C NFAKGSC
Sbjct: 263 NIEFEGTFDQIRNASAMVIELIVSISG---------------IGSNFKTKMCENFAKGSC 307
Query: 271 TFGDRCHFAHGAAELRKTA 289
++G +CHFAHG +ELRK A
Sbjct: 308 SYGGKCHFAHGESELRKPA 326
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 5/88 (5%)
Query: 42 STAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMC 100
ST GCPFGE CHF+HYFPG Y AV++M NL A AP M + P PT +VK+R+C
Sbjct: 15 STYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIAPPGGMMMDGP----PTPIVKTRLC 70
Query: 101 NRLNSAEGCKFGDKCHFAHGEWELGKPI 128
N+ N+AEGCK+GD+CHFAHGE ELGK +
Sbjct: 71 NKYNTAEGCKWGDRCHFAHGESELGKSM 98
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 258 KTKLCG--NFAKGSCTFGDRCHFAHGAAELRKTAI 290
KT+LC N A+G C +GDRCHFAHG +EL K+ +
Sbjct: 66 KTRLCNKYNTAEG-CKWGDRCHFAHGESELGKSMM 99
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKPIA 129
K++MC N A+G C +G KCHFAHGE EL KP A
Sbjct: 295 KTKMCE--NFAKGSCSYGGKCHFAHGESELRKPAA 327
>gi|367066548|gb|AEX12577.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066550|gb|AEX12578.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066552|gb|AEX12579.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066554|gb|AEX12580.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066556|gb|AEX12581.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066558|gb|AEX12582.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066560|gb|AEX12583.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066562|gb|AEX12584.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066564|gb|AEX12585.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066566|gb|AEX12586.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066568|gb|AEX12587.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066570|gb|AEX12588.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066572|gb|AEX12589.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066574|gb|AEX12590.1| hypothetical protein 2_4903_01 [Pinus taeda]
gi|367066576|gb|AEX12591.1| hypothetical protein 2_4903_01 [Pinus radiata]
Length = 135
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 10/137 (7%)
Query: 113 DKCHFAHGEWEL--GKPIA-ISHDDPRAFGA-VPGRMGGRYEPPPAPGP----AASFGAS 164
DKCHFAH E EL G +A + + ++G VPG GGR A P AASFG+S
Sbjct: 1 DKCHFAHSENELKKGNTLAPVEREWTSSYGRPVPG--GGRLVQHEATTPGMAAAASFGSS 58
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
ATAKISVDASL+GAIIGKGGVNSKQICR TG KL+I+DHE+D NL+NIELEGSF+QIKQA
Sbjct: 59 ATAKISVDASLSGAIIGKGGVNSKQICRVTGVKLAIKDHESDSNLKNIELEGSFDQIKQA 118
Query: 225 SAMVRELIVRIGPAHAK 241
S MV ELI++ AK
Sbjct: 119 STMVHELIMQTRAVAAK 135
>gi|367066578|gb|AEX12592.1| hypothetical protein 2_4903_01 [Pinus lambertiana]
Length = 142
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 98/142 (69%), Gaps = 13/142 (9%)
Query: 113 DKCHFAHGEWELGK-----PI----AISHDDPRAFGAVPGRMGGRY----EPPPAPGPAA 159
DKCHFAH E EL K P+ +S G + GR GGR PP AA
Sbjct: 1 DKCHFAHSENELKKGNTLAPVERERTVSSYGRTVPGVLDGRPGGRLVQHEAAPPGMAAAA 60
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFE 219
SFG+SATAKISVDASL+GAIIGKGGVNSKQICR TG +L+I+DHE+D NL+NIELEGSF+
Sbjct: 61 SFGSSATAKISVDASLSGAIIGKGGVNSKQICRVTGVRLAIKDHESDSNLKNIELEGSFD 120
Query: 220 QIKQASAMVRELIVRIGPAHAK 241
QIKQAS MV ELI++ AK
Sbjct: 121 QIKQASTMVHELIMQTRAVAAK 142
>gi|145355895|ref|XP_001422182.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582422|gb|ABP00499.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 35 KPCTKFFSTAGCPFGESCHFLH-YFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT 93
K C KFFS GC +G CHFLH Y PG + + + A+ P +
Sbjct: 10 KLCAKFFSIHGCAYGADCHFLHTYRPG----LPVPPRPAPLPYVYTMSDAMRPQVNEK-- 63
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPP 153
+K+R+C S +GC+FGD+C FAHGE EL R A MG Y
Sbjct: 64 -IKTRLCRNFESPQGCRFGDRCVFAHGEEEL-----------RTEEANTASMGSTYMLQT 111
Query: 154 APGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE---ADPNLR 210
+ A + V GAI+GK G Q+ +GAK+S+ E +D N R
Sbjct: 112 SIEQA--------VLVPVPQVHVGAIVGKAGSAIAQVSATSGAKVSMLSAEYTNSDGN-R 162
Query: 211 NIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GS 269
+ GS +++A M+ + + K+ A S P FKTK+C ++ + G
Sbjct: 163 LCRVIGSPLDVQRAQEMIYQRLTY--AERKKSDAPKDSKKKP----FKTKICDSWVRNGQ 216
Query: 270 CTFGDRCHFAHGAAELRK 287
C FG RCH+AHG EL++
Sbjct: 217 CPFGRRCHYAHGNEELQQ 234
>gi|361069073|gb|AEW08848.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
Length = 68
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 52/54 (96%)
Query: 180 IGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
IGKGGVNSKQICR TGAKL+IRDHE+D NL+NIELEGSF+QIK+ASA+VRELI+
Sbjct: 1 IGKGGVNSKQICRATGAKLAIRDHESDTNLKNIELEGSFDQIKEASALVRELIM 54
>gi|361069071|gb|AEW08847.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176242|gb|AFG71652.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176244|gb|AFG71653.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176246|gb|AFG71654.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176248|gb|AFG71655.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176250|gb|AFG71656.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176252|gb|AFG71657.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176254|gb|AFG71658.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176256|gb|AFG71659.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176258|gb|AFG71660.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176260|gb|AFG71661.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176262|gb|AFG71662.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176264|gb|AFG71663.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176266|gb|AFG71664.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176268|gb|AFG71665.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176270|gb|AFG71666.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176272|gb|AFG71667.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176274|gb|AFG71668.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
gi|383176276|gb|AFG71669.1| Pinus taeda anonymous locus CL1922Contig1_03 genomic sequence
Length = 68
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 52/54 (96%)
Query: 180 IGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
IGKGGVNSKQICR TGAKL+IRDHE+D NL+NIELEGSF+QIK+ASA+VR+LI+
Sbjct: 1 IGKGGVNSKQICRSTGAKLAIRDHESDTNLKNIELEGSFDQIKEASALVRQLIM 54
>gi|308813492|ref|XP_003084052.1| KH domain-containing protein / zinc finger protein-like (ISS)
[Ostreococcus tauri]
gi|116055935|emb|CAL58468.1| KH domain-containing protein / zinc finger protein-like (ISS),
partial [Ostreococcus tauri]
Length = 248
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 34/257 (13%)
Query: 37 CTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVK 96
C + + + CHFLH + G ++ LP + M + VK
Sbjct: 7 CARILQHSRVRVRDDCHFLHTYRAGLTLPSRPAPLPYVYAVNAHGMHMNEK-------VK 59
Query: 97 SRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPG 156
+R+C S EGC++G++C FAHGE EL F G +G P G
Sbjct: 60 TRLCRHFQSPEGCRYGERCFFAHGEAEL---------RTEEFNIATG-IG-----MPGCG 104
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR--DHEADPNLRNIEL 214
++F + V + G ++GK G N + ++GAK+S+ ++ R +
Sbjct: 105 TGSAF--EQCVLVPVPQAHVGTVVGKAGSNIARTSSESGAKVSMLSAEYTNSDGSRLCRV 162
Query: 215 EGSFEQIKQASAMVRELIV---RIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFA-KGSC 270
G+ +++A M+ +V R K+ S+ P +KTK+C ++ GSC
Sbjct: 163 VGTPLDVQKAKDMIEHRLVIARRKKRDDGKSLRDDKSSMKP----YKTKICVSWINNGSC 218
Query: 271 TFGDRCHFAHGAAELRK 287
TFGD CHFAHG +L+K
Sbjct: 219 TFGDNCHFAHGEVQLQK 235
>gi|414870565|tpg|DAA49122.1| TPA: hypothetical protein ZEAMMB73_676725 [Zea mays]
Length = 185
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 54/72 (75%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
A +F A TAKIS+DASLAG I+GKG VN+KQ R T KLSIR+HE++P L+NIELEG+
Sbjct: 53 AENFDALVTAKISMDASLAGGIMGKGRVNTKQTSRVTCVKLSIRNHESNPKLKNIELEGN 112
Query: 218 FEQIKQASAMVR 229
F QI Q + R
Sbjct: 113 FNQINQTNDFAR 124
>gi|413943276|gb|AFW75925.1| hypothetical protein ZEAMMB73_717066 [Zea mays]
Length = 298
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
Query: 190 ICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAH-AKNPATAGS 248
+ R TG KLSIRDHE++PNL+NIELEG+F+QIKQAS ++R+LI I + AKNP++A +
Sbjct: 202 LSRVTGVKLSIRDHESNPNLKNIELEGNFDQIKQASDLLRDLIATISASMPAKNPSSAVA 261
Query: 249 AA--------HPLSSNFKTKLCGNFAK 267
A SSN+KTKLC NF K
Sbjct: 262 PAGGGQGSGPGGTSSNYKTKLCENFLK 288
>gi|357144913|ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMA 83
ES SG K + C KF++ GCP+G++C FLH +VA ++L +V S N
Sbjct: 169 ESVSGRAYKGRHCKKFYTEEGCPYGDACTFLHDEQSKARESVA--ISLSPSVGGGSYNS- 225
Query: 84 VPPPASNGPTVVK-----SRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
P A+NGPT++K +R+CN+ C FG KCHFAHG EL K
Sbjct: 226 -PTAAANGPTILKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 272
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLS-SNFKTKLCGNFA-KGSCTFGDRC 276
EQ K ++ L +G +P A + L SN+KT++C + G C FG +C
Sbjct: 202 EQSKARESVAISLSPSVGGGSYNSPTAAANGPTILKPSNWKTRICNKWEMTGYCPFGSKC 261
Query: 277 HFAHGAAELRK 287
HFAHGAAEL K
Sbjct: 262 HFAHGAAELHK 272
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 103 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 133
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAV------AQMMNLPQAVPAPSR 80
K+K C KF CP+ +C+F H P + + A +P +
Sbjct: 104 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEQREEHQIPIMTS 162
Query: 81 NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ P + +G K R C + + EGC +GD C F H E
Sbjct: 163 SSVAPSESVSG-RAYKGRHCKKFYTEEGCPYGDACTFLHDE 202
>gi|361069911|gb|AEW09267.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153866|gb|AFG59061.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153867|gb|AFG59062.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153868|gb|AFG59063.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153869|gb|AFG59064.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153870|gb|AFG59065.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153871|gb|AFG59066.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153872|gb|AFG59067.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153873|gb|AFG59068.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153874|gb|AFG59069.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153875|gb|AFG59070.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153876|gb|AFG59071.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153877|gb|AFG59072.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153878|gb|AFG59073.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153879|gb|AFG59074.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153880|gb|AFG59075.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153881|gb|AFG59076.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
gi|383153882|gb|AFG59077.1| Pinus taeda anonymous locus UMN_1724_01 genomic sequence
Length = 64
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 7/66 (10%)
Query: 222 KQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHG 281
KQA+AMVRELI+ +A +AH + N KTKLC N+AKG+CTFGDRC+FAHG
Sbjct: 1 KQATAMVRELIMH------NELQSAKPSAH-VPQNRKTKLCENYAKGTCTFGDRCNFAHG 53
Query: 282 AAELRK 287
A ELR+
Sbjct: 54 ANELRE 59
>gi|326527125|dbj|BAK04504.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMA 83
+S SG K + C KF++ GCP+G++C FLH +VA ++L +V S N A
Sbjct: 168 DSVSGRAYKGRHCKKFYTEEGCPYGDTCTFLHDEQSKARESVA--ISLSPSVGGGSYNSA 225
Query: 84 VPPPASNGPTVVK-----SRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
A NGPT++K +R+CN+ C FG KCHFAHG EL K
Sbjct: 226 AAAAAPNGPTILKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 273
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL K
Sbjct: 240 SNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 273
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 102 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 132
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAV------AQMMNLPQAVPAPSR 80
K+K C KF CP+ +C+F H P + + A +P +
Sbjct: 103 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEQREEHQIPIMTS 161
Query: 81 NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ VP + +G K R C + + EGC +GD C F H E
Sbjct: 162 SNVVPGDSVSG-RAYKGRHCKKFYTEEGCPYGDTCTFLHDE 201
>gi|357144905|ref|XP_003573455.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 363
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
+S SG K + C KF++ GCP+G++C FLH + + + + + + +
Sbjct: 170 DSVSGRAYKGRHCKKFYTEEGCPYGDACTFLH---DEQSKARESVAISLSPSVGGGSYSS 226
Query: 85 PPPASNGPTVVK-----SRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P A+NGPT++K +R+CN+ C FG KCHFAHG EL
Sbjct: 227 PTAAANGPTILKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAEL 271
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLS-SNFKTKLCGNFA-KGSCTFGDRC 276
EQ K ++ L +G +P A + L SN+KT++C + G C FG +C
Sbjct: 203 EQSKARESVAISLSPSVGGGSYSSPTAAANGPTILKPSNWKTRICNKWEMTGYCPFGSKC 262
Query: 277 HFAHGAAEL 285
HFAHGAAEL
Sbjct: 263 HFAHGAAEL 271
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 103 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 133
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAV------AQMMNLPQAVPAPSR 80
K+K C KF CP+ +C+F H P + + A +P +
Sbjct: 104 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEQREEHQIPIMTS 162
Query: 81 NMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ P S K R C + + EGC +GD C F H E
Sbjct: 163 SSVAAPGDSVSGRAYKGRHCKKFYTEEGCPYGDACTFLHDE 203
>gi|195654771|gb|ACG46853.1| hypothetical protein [Zea mays]
Length = 157
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 1 MDT-RKRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGES 51
MDT RKRT PE G N G K+++ +GVGSKSKPCTKFFSTAGCPFG +
Sbjct: 1 MDTGRKRTAPE-GANGAGGPKRARESETTGVGSKSKPCTKFFSTAGCPFGAT 51
>gi|225454706|ref|XP_002271522.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Vitis vinifera]
Length = 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 27 ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMAVP 85
ES K + C KF++ GCP+G+SC FLH +VA ++L V +
Sbjct: 148 ESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSRARESVA--ISLSPTVGGGGYGSSGA 205
Query: 86 PPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ P+ K+R+CN+ + C FG+KCHFAHG EL K
Sbjct: 206 NGPNQKPSNWKTRICNKWETTGSCPFGNKCHFAHGVAELHK 246
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + GSC FG++CHFAHG AEL K
Sbjct: 213 SNWKTRICNKWETTGSCPFGNKCHFAHGVAELHK 246
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLCG F G C + C+FAHG ELR+
Sbjct: 73 FKTKLCGKFRAGVCPYITNCNFAHGMEELRR 103
>gi|302775686|ref|XP_002971260.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
gi|300161242|gb|EFJ27858.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
Length = 465
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 120 GEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAI 179
GE E K S DD + R GG Y P+ S+ T ++ V + G +
Sbjct: 86 GEVEY-KRARTSADDNDGVASNVERAGGHYGHQDDRPPSDSYVQHQTKRVDVPNTKVGLV 144
Query: 180 IGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
IGKGG + + +Q+GAK+ + RD EADP R +EL G+ EQI +A ++RE++
Sbjct: 145 IGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRAEQLIREVV 200
>gi|302756263|ref|XP_002961555.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
gi|300170214|gb|EFJ36815.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
Length = 471
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 120 GEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAI 179
GE E K S DD + R GG Y P+ S+ T ++ V + G +
Sbjct: 86 GEVEY-KRARTSADDNDGVASNVERAGGHYGHQDDRPPSDSYVQHQTKRVDVPNTKVGLV 144
Query: 180 IGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
IGKGG + + +Q+GAK+ + RD EADP R +EL G+ EQI +A ++RE++
Sbjct: 145 IGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRAEQLIREVV 200
>gi|376339039|gb|AFB34048.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339041|gb|AFB34049.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339043|gb|AFB34050.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339045|gb|AFB34051.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339047|gb|AFB34052.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339049|gb|AFB34053.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339051|gb|AFB34054.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
gi|376339053|gb|AFB34055.1| hypothetical protein CL2297Contig1_03, partial [Abies alba]
Length = 69
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNM-----AVPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR +VPP P + K+R+CNR ++ EGC+FGDKCH
Sbjct: 2 NAIPQMPTLGSTFGAASRKTIGLTPSVPPLDKPDPGLGYKTRLCNRYSTGEGCQFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAEL 285
+KT+LC ++ G C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRYSTGEGCQFGDKCHFAHGEKEL 69
>gi|302771343|ref|XP_002969090.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
gi|300163595|gb|EFJ30206.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
Length = 136
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 29 GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPA 88
G +K +PC +FF+ CP+GE C F H P AV P+ A+ +
Sbjct: 55 GNAAKLRPCKRFFAEGVCPYGERCIFSHEDP--------------AV-KPAATTAISNAS 99
Query: 89 SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
+ P K+R+CN+ + C FGDKCHFAHG
Sbjct: 100 TAKPLNWKTRLCNKWETTGSCPFGDKCHFAHG 131
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 248 SAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAA 283
S A PL N+KT+LC + GSC FGD+CHFAHG A
Sbjct: 99 STAKPL--NWKTRLCNKWETTGSCPFGDKCHFAHGIA 133
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 6 FKTKLCSRFRAGTCPYITNCNFAHGMEELRK 36
>gi|302784404|ref|XP_002973974.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
gi|300158306|gb|EFJ24929.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
Length = 136
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 29 GVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPA 88
G +K +PC +FF+ CP+GE C F H P AV P+ A+ +
Sbjct: 55 GNAAKLRPCKRFFAEGVCPYGERCIFSHEDP--------------AV-KPAATTAISNAS 99
Query: 89 SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
+ P K+R+CN+ + C FGDKCHFAHG
Sbjct: 100 TAKPLNWKTRLCNKWETTGSCPFGDKCHFAHG 131
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 248 SAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAA 283
S A PL N+KT+LC + GSC FGD+CHFAHG A
Sbjct: 99 STAKPL--NWKTRLCNKWETTGSCPFGDKCHFAHGIA 133
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 6 FKTKLCSRFRAGTCPYITNCNFAHGMEELRK 36
>gi|449436820|ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 339
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVP 85
SES K + C KF++ GCP+G+SC FLH ++ +
Sbjct: 156 SESQRSYKGRHCKKFYTEEGCPYGDSCTFLH-----DEQSKNRESVAISFGGGGGGGGSG 210
Query: 86 PPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
++ P+ K+R+CN+ C FG+KCHFAHG EL +
Sbjct: 211 NGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHR 251
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHGAAEL +
Sbjct: 218 SNWKTRICNKWELTGYCPFGNKCHFAHGAAELHR 251
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAVPA-PSRNMAVP 85
K+K C KF CP+ +C+F H P + + +AV + P +P
Sbjct: 89 KTKLCCKF-RAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIP 147
Query: 86 PPA-----SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S K R C + + EGC +GD C F H E
Sbjct: 148 SLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDE 188
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 88 FKTKLCCKFRAGTCPYITNCNFAHSIEELRR 118
>gi|212723490|ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea mays]
gi|194692650|gb|ACF80409.1| unknown [Zea mays]
gi|195628590|gb|ACG36125.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|224031423|gb|ACN34787.1| unknown [Zea mays]
gi|407232606|gb|AFT82645.1| C3H31 transcription factor, partial [Zea mays subsp. mays]
gi|413917333|gb|AFW57265.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
gi|413917334|gb|AFW57266.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
Length = 359
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMAVPPPASNG 91
K + C KF++ GCP+G++C FLH +VA ++L V N A ++NG
Sbjct: 176 KGRHCKKFYTEEGCPYGDTCTFLHDEQSKARESVA--ISLSPTVGGGGYNAA----SANG 229
Query: 92 -----PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
P+ K+R+CN+ C FG KCHFAHG EL K
Sbjct: 230 VMVQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGSTELHK 269
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
N A+A SN+KT++C + G C FG +CHFAHG+ EL K
Sbjct: 223 NAASANGVMVQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGSTELHK 269
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 94 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 124
>gi|225713900|gb|ACO12796.1| RING finger protein unkempt [Lepeophtheirus salmonis]
Length = 469
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 31 GSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASN 90
G K+K C+K+ C FGE CHF+H N V ++L M ++
Sbjct: 166 GYKTKICSKYREHNHCEFGELCHFIHG-----NEVIPGIDL----------MHKNDNSNK 210
Query: 91 GPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDP 135
K+ MC ++ S E C++G KC FAH E EL KP+ +S + P
Sbjct: 211 FDATYKTTMCRKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAP 255
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 79/279 (28%)
Query: 15 ANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLP-- 72
A GV + K ++++ K+ C F + CP +C F H VA++ + P
Sbjct: 90 ARGVRELRKPKNKNNPLFKTTLCKLFSESGFCPNAVNCQFAH-------GVAELRSKPID 142
Query: 73 ---QAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL-GKPI 128
+P A N P K+++C++ C+FG+ CHF HG + G +
Sbjct: 143 SFELESLSPEERQRRLEKAKNTPG-YKTKICSKYREHNHCEFGELCHFIHGNEVIPGIDL 201
Query: 129 AISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK 188
+D+ F DA+ + K + SK
Sbjct: 202 MHKNDNSNKF---------------------------------DATYKTTMCRK--IMSK 226
Query: 189 QICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGS 248
++C + G+K E++ + + L V + H N
Sbjct: 227 EMC-EYGSKCRFAHSESE--------------------LRKPLNVSMNAPHNTN------ 259
Query: 249 AAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+ S FKT LC N+ + G C +GD C FAHG+ +LR
Sbjct: 260 --YHNSLAFKTVLCSNYTETGQCKYGDNCQFAHGSEQLR 296
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPAS--- 89
K+ C+ + T C +G++C F H ++ + LPQ + A + ++PP +
Sbjct: 267 KTVLCSNYTETGQCKYGDNCQFAH--------GSEQLRLPQPLQANIQQQSIPPISKFSG 318
Query: 90 NGPTVV-KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPI 128
N P+V+ K+ MC + + C G C FAH EL P+
Sbjct: 319 NSPSVLYKTTMCANIRNKIPCPHGPSCLFAHSNGELRSPM 358
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%)
Query: 18 VFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPA 77
+ K+ + ++ K+ C K S C +G C F H + MN P
Sbjct: 201 LMHKNDNSNKFDATYKTTMCRKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAPHNT-- 258
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
+ K+ +C+ CK+GD C FAHG +L P
Sbjct: 259 ----------NYHNSLAFKTVLCSNYTETGQCKYGDNCQFAHGSEQLRLP 298
>gi|18129298|emb|CAC83362.1| similarity to the EST C99174 [Pinus pinaster]
Length = 80
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 13/77 (16%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHD--DPRA---------FGAVPG 143
K+R+C+ + GC+FGDKCHFAHGE ELGK A++H+ D A G + G
Sbjct: 4 YKTRLCSNFGTDTGCRFGDKCHFAHGEKELGKVNAVAHNLKDDLATGPFGSRFPVGGLDG 63
Query: 144 RMGGR--YEPPPAPGPA 158
++GGR Y +PG A
Sbjct: 64 KLGGRPGYREATSPGMA 80
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAKGS-CTFGDRCHFAHGAAELRKT 288
+SN+KT+LC NF + C FGD+CHFAHG EL K
Sbjct: 1 ASNYKTRLCSNFGTDTGCRFGDKCHFAHGEKELGKV 36
>gi|224078145|ref|XP_002305494.1| predicted protein [Populus trichocarpa]
gi|222848458|gb|EEE86005.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 23/129 (17%)
Query: 22 SKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPA---- 77
+ E + + K K C KF++ CP+G+ C+FLH P + A+
Sbjct: 106 TNREDDLRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPANFREDTGRFRESSAISIGTTD 165
Query: 78 -----------------PSRNMAVPPPASN--GPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
P+ N P SN P K+++C + C FG+KCHFA
Sbjct: 166 HLMGQGSGIFNAAEVNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFA 225
Query: 119 HGEWELGKP 127
HG EL P
Sbjct: 226 HGLAELQVP 234
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 96/275 (34%), Gaps = 99/275 (36%)
Query: 24 HESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMA 83
H+ + + K++ C KF T C GE+C+F H M +L Q P ++
Sbjct: 45 HKGTTNIFFKTRVCAKF-KTGTCRNGENCNFAH----------GMQDLRQPPPNWKELVS 93
Query: 84 VPPPASNGPTVVKSR-----------MCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISH 132
V + + + +R +C + + E C +GD+C+F H
Sbjct: 94 VGVSSEDDRSTATNREDDLRIIHKMKLCKKFYNGEECPYGDRCNFL-------------H 140
Query: 133 DDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICR 192
+DP F GR F S+ I L G G G N+ ++ R
Sbjct: 141 EDPANFREDTGR----------------FRESSAISIGTTDHLMGQ--GSGIFNAAEVNR 182
Query: 193 QTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHP 252
+S D N+ I P +
Sbjct: 183 PANNAVS------DAPRSNL----------------------IKPVY------------- 201
Query: 253 LSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
+KTKLC + G C FG++CHFAHG AEL+
Sbjct: 202 ----WKTKLCTKWEMTGQCPFGEKCHFAHGLAELQ 232
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 243 PATAGSAAHPLSSN--FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
P T H ++N FKT++C F G+C G+ C+FAHG +LR+
Sbjct: 37 PPTNSLPVHKGTTNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQ 83
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 157 PAASFGA--SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRN 211
P S+G + KI + G IIGK G + I Q+GAK+ + RDHEA+P R
Sbjct: 132 PQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQ 191
Query: 212 IELEGSFEQIKQASAMVRELIVR--IGPAHAKNPATAGSAAHPLSSNFKTKLCGN 264
+EL G+ EQI +A +++E+I G + A + +A P + F+ K+ N
Sbjct: 192 VELSGNPEQISKAEQLIKEVIAEADAGSSGAVSGGRKYNAPQPGAETFQMKIANN 246
>gi|168016167|ref|XP_001760621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688318|gb|EDQ74696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 662
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPP------ 86
K++PC K+F CP+GE C+FLH AV + + A + + A P
Sbjct: 231 KTRPCKKYFGEGNCPYGEKCNFLHDEHSVPRAVREARDAAVAAASGAVVAASPKVEMQLA 290
Query: 87 PASNG---------------------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELG 125
P +NG P+ K+R+CN+ + C F DKCHFAHG EL
Sbjct: 291 PTTNGNTKEGEGGSSTPAGSATPNARPSNWKTRLCNKWETTGHCPFEDKCHFAHGSDELQ 350
Query: 126 K 126
+
Sbjct: 351 R 351
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
SN+KT+LC + G C F D+CHFAHG+ EL++
Sbjct: 318 SNWKTRLCNKWETTGHCPFEDKCHFAHGSDELQR 351
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KTKLC F G+C + C+FAHG ELRK
Sbjct: 158 YKTKLCSRFRSGNCPYSTNCNFAHGMEELRK 188
>gi|224073744|ref|XP_002304152.1| predicted protein [Populus trichocarpa]
gi|222841584|gb|EEE79131.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 30 VGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPAS 89
V C F S GC +G C FLH P + NL Q + + ++ AS
Sbjct: 97 VNEDKNLCRMFNSGKGCTYGNKCRFLHVVPENFQK-----NLGQNWESSAISIGTTGTAS 151
Query: 90 NG---PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+G K+R+CN GC +G CHFAHG+ EL K
Sbjct: 152 SGGHKKGYKKTRLCNNWEMTGGCPYGKVCHFAHGQQELEK 191
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT+LC F G C+ G +C FAH +LRK
Sbjct: 57 FKTQLCMKFRTGHCSHGSKCLFAHAVCDLRK 87
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 245 TAGSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
TA S H KT+LC N+ G C +G CHFAHG EL K+
Sbjct: 149 TASSGGHKKGYK-KTRLCNNWEMTGGCPYGKVCHFAHGQQELEKS 192
>gi|297742083|emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 27 ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPP 86
E+ K + C KF++ GCP+G++C FLH + ++V A
Sbjct: 151 ETQRSYKGRHCKKFYTDEGCPYGDNCTFLH---------DEQSKARESVAISLGPGAGGG 201
Query: 87 PASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
++ P+ K+R+CN+ C FG KCHFAHG EL
Sbjct: 202 GSNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGEL 239
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAVPA-PSRNMAVP 85
K+K C KF CP+ +C+F H P + + + + V + P +P
Sbjct: 83 KTKLCCKF-RAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIP 141
Query: 86 PPASNGPTV-----VKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+ V K R C + + EGC +GD C F H E
Sbjct: 142 SIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDE 182
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHG EL +
Sbjct: 208 SNWKTRICNKWELTGYCPFGSKCHFAHGMGELHR 241
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 82 FKTKLCCKFRAGTCPYVTNCNFAHSIQELRR 112
>gi|413949053|gb|AFW81702.1| hypothetical protein ZEAMMB73_884899 [Zea mays]
Length = 405
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGS 217
F S T + V+ L G IIGK G + I Q+GAK+ + RDHEA+P R +EL G
Sbjct: 241 FVFSLTGTV-VNLLLVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGK 299
Query: 218 FEQIKQASAMVRELIVRIGPAH 239
E+I +A +++E++ + P H
Sbjct: 300 LERISKAEQLIKEVLAEVIPLH 321
>gi|18402211|ref|NP_566631.1| zinc finger CCCH domain-containing protein 39 [Arabidopsis
thaliana]
gi|75274079|sp|Q9LT81.1|C3H39_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 39;
Short=AtC3H39
gi|11994458|dbj|BAB02460.1| unnamed protein product [Arabidopsis thaliana]
gi|14335094|gb|AAK59826.1| AT3g19360/MLD14_8 [Arabidopsis thaliana]
gi|19548069|gb|AAL87398.1| AT3g19360/MLD14_8 [Arabidopsis thaliana]
gi|332642708|gb|AEE76229.1| zinc finger CCCH domain-containing protein 39 [Arabidopsis
thaliana]
Length = 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 43/236 (18%)
Query: 77 APSRNMAVPPPASNGPTVV--KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDD 134
PS N PPP + G + K+RMC + A C+ G+ C+FAHG +L +P
Sbjct: 88 VPSLN---PPPVNKGTANIFYKTRMCAKF-RAGTCRNGELCNFAHGIEDLRQP------- 136
Query: 135 PRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQT 194
P + + G PPPA + SLA + + K I R
Sbjct: 137 PSNWQEIVG-------PPPAGQDRERERERERERER--PSLAPVVNNNWEDDQKIILRMK 187
Query: 195 GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL-IVRIGPAHAKNPATA------- 246
+ E R + + ++ S +RE ++ +G A P+
Sbjct: 188 LCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEV 247
Query: 247 ---GSAAHPLSSN---------FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
GS P N +KT+LC F G C FGD+CHFAHG AEL +
Sbjct: 248 NRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSV 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLH-----------------YFPGGYNAVAQ 67
E + + + K C KF CP+G+ C+F+H G A Q
Sbjct: 177 EDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQ 236
Query: 68 MMNLPQAVPAPSR--NMAVPPPASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ + +R ++ VP P +NG V K+R+C + + C FGDKCHFAHG+
Sbjct: 237 PSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQ 296
Query: 122 WEL 124
EL
Sbjct: 297 AEL 299
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 32/173 (18%)
Query: 74 AVPAPSRNMAVPPP------ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
AVP PS +VPPP A + +R+ N + A+ + + + +G
Sbjct: 50 AVPPPSSYNSVPPPMDEIQIAKQKAQEIAARLLNSAD-AKRPRVENGASYDYG------- 101
Query: 128 IAISHDDPRAFGAVPG---RMGGRYEPPPAPGPAASFGA--SATAKISVDASLAGAIIGK 182
D + F + P +M G PP+ P S+G+ T KI + G IIGK
Sbjct: 102 ------DNKGFSSYPSEGKQMSGT---PPSSIPV-SYGSFQGTTKKIDIPNMRVGVIIGK 151
Query: 183 GGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
GG K + Q+GAK+ + RD +ADPN R ++L G+ +QI +A ++ +++
Sbjct: 152 GGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQISKAEQLITDVL 204
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHE---ADPN-LRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K + +TGA++ + DP R ++++G EQI+ A +V E+I
Sbjct: 241 GLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEII 300
>gi|449520671|ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 350
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNL-------PQAVPAP 78
SES K + C KF++ GCP+G+SC FLH N + ++L
Sbjct: 156 SESQRSYKGRHCKKFYTEEGCPYGDSCTFLH-DEQSKNRESVAISLGPGGYSGGGGGGGG 214
Query: 79 SRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
++ P+ K+R+CN+ C FG+KCHFAHG EL
Sbjct: 215 GGGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAEL 260
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHGAAEL +
Sbjct: 229 SNWKTRICNKWELTGYCPFGNKCHFAHGAAELHR 262
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAVPA-PSRNMAVP 85
K+K C KF CP+ +C+F H P + + +AV + P +P
Sbjct: 89 KTKLCCKF-RAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIP 147
Query: 86 PPA-----SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S K R C + + EGC +GD C F H E
Sbjct: 148 SLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDE 188
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 88 FKTKLCCKFRAGTCPYITNCNFAHSIEELRR 118
>gi|413917332|gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays]
Length = 363
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMAVPPPASNG 91
K + C KF++ GCP+G++C FLH +VA ++L V N A ++NG
Sbjct: 176 KGRHCKKFYTEEGCPYGDTCTFLHDEQSKARESVA--ISLSPTVGGGGYNAA----SANG 229
Query: 92 -----PTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
P+ K+R+CN+ C FG KCHFAHG
Sbjct: 230 VMVQKPSNWKTRICNKWEMTGYCPFGSKCHFAHG 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 94 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 124
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGA----AELRK 287
N A+A SN+KT++C + G C FG +CHFAHG+ AEL K
Sbjct: 223 NAASANGVMVQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGSTAIIAELHK 273
>gi|255566953|ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
gi|223536247|gb|EEF37899.1| conserved hypothetical protein [Ricinus communis]
Length = 341
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
+ + + K K C KF++ CP+G+ C+FLH P + A A+ S
Sbjct: 138 DDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDDAGRFRESSAI---SIGTTA 194
Query: 85 PP---------------PASNG----------PTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
PP P +N P K+++C + + C FG+KCHFAH
Sbjct: 195 PPMMHGSGGLSVVEVNKPVNNAGADAYRGNMKPVYWKTKLCTKWETTGQCPFGEKCHFAH 254
Query: 120 GEWELGKP 127
G+ EL P
Sbjct: 255 GQAELQIP 262
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
+KTKLC + G C FG++CHFAHG AEL+
Sbjct: 230 WKTKLCTKWETTGQCPFGEKCHFAHGQAELQ 260
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT++C F GSC G+ C+FAHG ++R+
Sbjct: 83 FKTRMCAKFKTGSCRNGENCNFAHGMQDMRQ 113
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C KF T C GE+C+F H L V + +
Sbjct: 84 KTRMCAKF-KTGSCRNGENCNFAHGMQDMRQPPPNWQELVGVVVRGEEDRPAGNWDDDQR 142
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ K ++C + + E C +GD+C+F H +
Sbjct: 143 IIHKMKLCKKFYNGEQCPYGDRCNFLHED 171
>gi|224105223|ref|XP_002313732.1| predicted protein [Populus trichocarpa]
gi|222850140|gb|EEE87687.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 22 SKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRN 81
+ E + + K K C KF++ CP+G+ C+FLH P + A+ +
Sbjct: 133 TNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGTTG 192
Query: 82 MA------------VPPPASNG-----------PTVVKSRMCNRLNSAEGCKFGDKCHFA 118
A V PA+N P K+++C + C FG+KCHFA
Sbjct: 193 QALGHGSGVFNAAEVNRPANNAVSDASRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFA 252
Query: 119 HGEWELGKP 127
HG EL P
Sbjct: 253 HGLAELQAP 261
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 92/265 (34%), Gaps = 79/265 (29%)
Query: 24 HESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMA 83
H+ + + K++ C KF T C GE+C+F H L + + +
Sbjct: 72 HKGATNIFFKTRVCAKF-KTGTCRNGENCNFAHGMQDLRQPPPNWKELVGVSVSSEEDRS 130
Query: 84 VPPPASNGPTVV-KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVP 142
+ ++ K ++C + + E C +GD+C+F H +DP F
Sbjct: 131 TATNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLH-------------EDPSKFREDT 177
Query: 143 GRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
GR F S+ I G G G N+ ++ R +S
Sbjct: 178 GR----------------FRESSAISIGTTGQALGH--GSGVFNAAEVNRPANNAVS--- 216
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLC 262
D + NI I P + +KTKLC
Sbjct: 217 ---DASRSNI----------------------IKPVY-----------------WKTKLC 234
Query: 263 GNFA-KGSCTFGDRCHFAHGAAELR 286
+ G C FG++CHFAHG AEL+
Sbjct: 235 TKWEITGQCPFGEKCHFAHGLAELQ 259
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 238 AHAKNPATAGSAAHPLSSN--FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+++ P T H ++N FKT++C F G+C G+ C+FAHG +LR+
Sbjct: 59 VNSRTPPTNNLPVHKGATNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQ 110
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 16 NGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYF-----PGGYNAV 65
N V S+ V K+K CTK+ T CPFGE CHF H PGG V
Sbjct: 213 NAVSDASRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPGGRTEV 267
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 9/98 (9%)
Query: 162 GASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGS 217
G+ T+K I++ + G +IGKGG K I Q+GAK+ I +D +ADP+ R++EL G+
Sbjct: 82 GSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGT 141
Query: 218 FEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSS 255
EQI +A ++ ++I A +A SA H L++
Sbjct: 142 SEQISRAEELINDVI-----AETDAGGSASSAVHGLNT 174
>gi|302782441|ref|XP_002972994.1| hypothetical protein SELMODRAFT_413367 [Selaginella moellendorffii]
gi|300159595|gb|EFJ26215.1| hypothetical protein SELMODRAFT_413367 [Selaginella moellendorffii]
Length = 274
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++PC KFF CP+ + C FLH P + + + ++ PP
Sbjct: 107 KTRPC-KFFREGSCPYADRCTFLH------------DEAPSSSCSSIDHSSIRPPN---- 149
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISH 132
K+R+CN+ S+ C FG KCHFAHG EL K H
Sbjct: 150 --WKTRICNQWESSGRCSFGGKCHFAHGAGELQKADNFQH 187
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+KTKLC F GSC F RC+FAHG ELR+ A
Sbjct: 55 YKTKLCSKFIAGSCPFEARCNFAHGVEELRRPA 87
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 256 NFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
N+KT++C + + G C+FG +CHFAHGA EL+K
Sbjct: 149 NWKTRICNQWESSGRCSFGGKCHFAHGAGELQK 181
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI + G IIGK G + I Q+GAK+ + RDHEA+P R +EL G EQI +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 225 SAMVRELIVR 234
+++E++
Sbjct: 202 EQLIKEVLAE 211
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-------RDHEADPNLRNIELEGSF 218
T ++ + + G IIGKGG K + +GA++ + D + R + ++G+
Sbjct: 235 TFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTSTE---RTVHIDGTQ 291
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTK 260
EQI+ A ++ E+ + A P A +P+S + +
Sbjct: 292 EQIEAAKQLISEVTSELARRTANYPGEQNRARNPMSGGYSQQ 333
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI + G IIGK G + I Q+GAK+ + RDHEA+P R +EL G EQI +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 225 SAMVRELIVR 234
+++E++
Sbjct: 202 EQLIKEVLAE 211
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNI 212
GP F + + KI++ G IIGKGG K + Q+GAK+ I RD EADP R++
Sbjct: 78 GPYHGF-QTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDV 136
Query: 213 ELEGSFEQIKQASAMVRELIVRI---GPAHAKNPATAGSAAHPLSSNFKTKLCGN 264
EL G+ EQ+ +A ++ E+I G A N A +++ P F K+ N
Sbjct: 137 ELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAI--NSSQPGVEQFVMKIPNN 189
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNI 212
GP F + + KI++ G IIGKGG K + Q+GAK+ I RD EADP R++
Sbjct: 78 GPYHGF-QTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDV 136
Query: 213 ELEGSFEQIKQASAMVRELIVRI---GPAHAKNPATAGSAAHPLSSNFKTKLCGN 264
EL G+ EQ+ +A ++ E+I G A N A +++ P F K+ N
Sbjct: 137 ELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAI--NSSQPGVEQFVMKIPNN 189
>gi|389600198|ref|XP_001561834.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504225|emb|CAM36853.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 349
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
NP GS P ++N+KT+LC FA+G C GD+C+FAHG ELR+
Sbjct: 190 NPHGGGSFERPHNANYKTRLCKGFAEGHCNRGDQCNFAHGVDELRQ 235
>gi|302805426|ref|XP_002984464.1| hypothetical protein SELMODRAFT_423520 [Selaginella moellendorffii]
gi|300147852|gb|EFJ14514.1| hypothetical protein SELMODRAFT_423520 [Selaginella moellendorffii]
Length = 278
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++PC KFF CP+ + C FLH P + + + ++ PP
Sbjct: 111 KTRPC-KFFREGSCPYADRCTFLH------------DEAPSSSCSSIDHSSIRPPN---- 153
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISH 132
K+R+CN+ S+ C FG KCHFAHG EL K H
Sbjct: 154 --WKTRICNQWESSGRCSFGGKCHFAHGAGELQKADNFQH 191
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+KTKLC F GSC F RC+FAHG ELR+ A
Sbjct: 55 YKTKLCSKFIAGSCPFEARCNFAHGVEELRRPA 87
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 256 NFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
N+KT++C + + G C+FG +CHFAHGA EL+K
Sbjct: 153 NWKTRICNQWESSGRCSFGGKCHFAHGAGELQK 185
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 232 IVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAA 283
+V GP+ +PA + H S +FKT+ C F +GSC + DRC F H A
Sbjct: 90 LVAAGPSFPLDPA---AGVH--SQSFKTRPCKFFREGSCPYADRCTFLHDEA 136
>gi|449443305|ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Cucumis sativus]
gi|449520655|ref|XP_004167349.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Cucumis sativus]
Length = 347
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 27 ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY----------NAVA------QMMN 70
+ + K K C KF++ CP+G+ C+FLH P + +A++ +MN
Sbjct: 145 DQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMN 204
Query: 71 --------LPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEW 122
P V + S + A+ + P+ K+++C + C FGDKCHFAHG+
Sbjct: 205 GNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQS 264
Query: 123 EL 124
EL
Sbjct: 265 EL 266
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KTKLC + G C FGD+CHFAHG +EL+
Sbjct: 237 WKTKLCTKWEITGHCPFGDKCHFAHGQSELQ 267
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT++C F G C G C+FAHG ++R+
Sbjct: 91 FKTRMCAKFKLGLCRNGASCNFAHGVEDMRQ 121
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPP 87
S + K++ C KF C G SC+F H G + N + V + +V
Sbjct: 87 SNIFFKTRMCAKF-KLGLCRNGASCNFAH---GVEDMRQPPPNWQEIVGIKEDDQSVNNW 142
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ + K ++C + + E C +GD+C+F H +
Sbjct: 143 NDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHED 176
>gi|361069227|gb|AEW08925.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|376339055|gb|AFB34056.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
gi|376339057|gb|AFB34057.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
gi|376339059|gb|AFB34058.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
gi|376339061|gb|AFB34059.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
gi|376339063|gb|AFB34060.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
gi|376339065|gb|AFB34061.1| hypothetical protein CL2297Contig1_03, partial [Pinus cembra]
Length = 69
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNMA-----VPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR VPP P + K+R+CNR + E C FGDKCH
Sbjct: 2 NAIPQMPTLGNTFGAGSRKTVGLTPGVPPLDKPDPGLGYKTRLCNRFGTDEKCLFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAEL 285
+KT+LC F C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRFGTDEKCLFGDKCHFAHGEKEL 69
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 148 RYEPPPAPGPAASF---GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDH 203
+Y PP G + G + KI V S G +IGKGG K + Q+GA++ + RD
Sbjct: 288 QYHQPPQHGSHQYYNQGGPHESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDG 347
Query: 204 EADP--NLRNIELEGSFEQIKQASAMVRELI 232
E+DP + R +EL G+ EQI +A +V+++I
Sbjct: 348 ESDPRSSTRQVELMGTPEQISRAEQLVKDVI 378
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSF 218
G A+ KI + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL GS
Sbjct: 121 GGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSP 180
Query: 219 EQIKQASAMVRELIVR 234
+ I A ++ E++
Sbjct: 181 DAIATAEKLINEVLAE 196
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADP----NLRNIELEGSFEQIKQASAMVRELI 232
G +IGKGG K + TGA++ + P R +++EG+ EQI+ A MV ++I
Sbjct: 228 GLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVI 287
Query: 233 VRIGPAHAKNPATAG 247
G +NP+ +G
Sbjct: 288 S--GENRQRNPSMSG 300
>gi|118344188|ref|NP_001071917.1| zinc finger protein [Ciona intestinalis]
gi|92081526|dbj|BAE93310.1| zinc finger protein [Ciona intestinalis]
Length = 335
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 29/92 (31%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+KPCT +++ CP+G+ C+F H
Sbjct: 193 KTKPCTTYYTIGTCPYGDKCNFYH-----------------------------TEDEKNS 223
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
T VK+R+C NS+ C++G++C FAHG EL
Sbjct: 224 TRVKTRLCKSWNSSGACEYGERCDFAHGSEEL 255
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
FKT++C + C FG CHFAHGA E++
Sbjct: 298 FKTEMCQLWLNNKCVFGAACHFAHGAEEMK 327
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
S+ KT+LC ++ + G+C +G+RC FAHG+ EL
Sbjct: 223 STRVKTRLCKSWNSSGACEYGERCDFAHGSEEL 255
>gi|413921224|gb|AFW61156.1| hypothetical protein ZEAMMB73_337051 [Zea mays]
Length = 215
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQ----AVPAPSRNMAVPPPA 88
K + C KF++ GCP+G++C FLH + LP A S + ++ +
Sbjct: 121 KGRHCKKFYTEEGCPYGDTCTFLHDEQSKARESVAISLLPTIGGGGYNAASASGSMAQNS 180
Query: 89 SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
SN K+R+CN+ C FG KCHFAHG
Sbjct: 181 SNW----KTRICNKWEMTGYCPFGSKCHFAHG 208
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 37/197 (18%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP------IAISHDDPRAFGAVPGRMGGRY 149
K+++C + A C + C+FAHG EL KP I +H+D + G +
Sbjct: 46 KTKLCCKF-WARTCPYVTNCNFAHGMEELCKPPPNWQEIVATHEDATT------KQGEEH 98
Query: 150 EPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNL 209
+ P T++ + G G + K+ + G + L
Sbjct: 99 QIP-----------IMTSRSVIAGDDGGGGRAYKGRHCKKFYTEEGCPYG----DTCTFL 143
Query: 210 RNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF-AKG 268
+ EQ K ++ L+ IG + +GS A SSN+KT++C + G
Sbjct: 144 HD-------EQSKARESVAISLLPTIGGGGYNAASASGSMAQN-SSNWKTRICNKWEMTG 195
Query: 269 SCTFGDRCHFAHGAAEL 285
C FG +CHFAHG+ +
Sbjct: 196 YCPFGSKCHFAHGSTVI 212
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 21/158 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF-------PGGYNAVAQMMNLP------QAVPAPS 79
K+K C KF++ CP+ +C+F H P VA + +P +
Sbjct: 46 KTKLCCKFWART-CPYVTNCNFAHGMEELCKPPPNWQEIVATHEDATTKQGEEHQIPIMT 104
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFG 139
+ G K R C + + EGC +GD C F H E + + A
Sbjct: 105 SRSVIAGDDGGGGRAYKGRHCKKFYTEEGCPYGDTCTFLHDEQSKAR-------ESVAIS 157
Query: 140 AVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAG 177
+P GG Y A G A ++ +I + G
Sbjct: 158 LLPTIGGGGYNAASASGSMAQNSSNWKTRICNKWEMTG 195
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 157 PAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNI 212
P S+G ++ KI + G IIGKGG K + Q+GAK+ I RD +ADPN R +
Sbjct: 75 PPVSYGHQGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTV 134
Query: 213 ELEGSFEQIKQASAMVRELIVR 234
EL G+ E I A ++ E++
Sbjct: 135 ELMGTPEAISSAEKLINEVLAE 156
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADP----NLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K + TGA++ + P R ++++G+ EQI+ A +V ++I
Sbjct: 188 GLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTPEQIESAKQLVYQVI 247
Query: 233 VRIGPAHAKNPATAG 247
G +NPA +G
Sbjct: 248 S--GENRVRNPAMSG 260
>gi|168028621|ref|XP_001766826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682035|gb|EDQ68457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 705
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSF 218
G + + KI V S G +IGKGG K + Q+GA++ + RD E+DP + R +EL G+
Sbjct: 242 GPNQSRKIDVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTP 301
Query: 219 EQIKQASAMVRELIV 233
EQI +A +V+++I
Sbjct: 302 EQISRAEQLVKDVIA 316
>gi|384491565|gb|EIE82761.1| hypothetical protein RO3G_07466 [Rhizopus delemar RA 99-880]
Length = 1031
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C +F + CP+G C+F H G + + + P + V NG
Sbjct: 602 KTRLCERFETEGTCPYGPKCNFAH----GIDDLRGKLE-----PQHDKEEVV---TENGN 649
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ K+++C + C++G KCHFAHGE EL
Sbjct: 650 QLFKTKLCEKFMKERFCQYGPKCHFAHGEAEL 681
Score = 44.3 bits (103), Expect = 0.070, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAELRK 287
FKTKLC F K C +G +CHFAHG AEL++
Sbjct: 652 FKTKLCEKFMKERFCQYGPKCHFAHGEAELKE 683
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
+KT+LC F +G+C +G +C+FAHG +LR
Sbjct: 601 YKTRLCERFETEGTCPYGPKCNFAHGIDDLR 631
Score = 37.7 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHD 133
N P + K+R+C R + C +G KC+FAHG +L + HD
Sbjct: 597 NNP-LYKTRLCERFETEGTCPYGPKCNFAHGIDDLRGKLEPQHD 639
>gi|297830586|ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329015|gb|EFH59434.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNA------VAQMMNLPQAVPAP 78
E + + + K C KF CP+G+ C+F+H + + ++++ + P
Sbjct: 180 EDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTSAADP 239
Query: 79 SRNMA-------------VPPPASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ A VP P +NG V K+R+C + + C FGDKCHFAHG+
Sbjct: 240 PSDTASNHIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQ 299
Query: 122 WEL 124
EL
Sbjct: 300 TEL 302
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 42/236 (17%)
Query: 77 APSRNMAVPPPASNGPTVV--KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDD 134
PS N PPP + G + K+RMC + A C+ G+ C+FAHG +L +P
Sbjct: 90 VPSLN---PPPVNKGTANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQP------- 138
Query: 135 PRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQT 194
P + + G PPP + SLA + K I R
Sbjct: 139 PSNWQEIVG-------PPPGQD-REKERERERERERERPSLAPVANNNWEDDQKIILRMK 190
Query: 195 GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL-IVRIGPAHAKNPATA------- 246
+ E R + + ++ S +RE ++ +G + A P+
Sbjct: 191 LCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTSAADPPSDTASNHIEV 250
Query: 247 ---GSAAHPLSSN---------FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
GS P N +KT+LC F G C FGD+CHFAHG EL +
Sbjct: 251 NRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQTELHNSV 306
>gi|125560223|gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYN---AVAQMMNLPQAVPAPSRNMAVPPPAS 89
K + C KF++ GCP+G++C FLH A++ ++ S N A AS
Sbjct: 171 KGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAAS 230
Query: 90 ------NGP----TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
NGP + K+R+CN+ C FG KCHFAHG EL K
Sbjct: 231 ASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL K
Sbjct: 244 SNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 88 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 118
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 29/113 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF-------PGGYNAVAQMMNLPQAVPAPSRNMAVP 85
K+K C KF CP+ +C+F H P VA +A +P
Sbjct: 89 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEA----REEHQIP 143
Query: 86 PPASNGPT-----------------VVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+GPT K R C + + EGC +GD C F H E
Sbjct: 144 IMTSSGPTAGGDAGGGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDE 196
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI + G IIGK G + I Q+GAK+ + RDHEA+P R +EL G+ +QI +A
Sbjct: 146 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQISKA 205
Query: 225 SAMVRELIVR 234
+++E++
Sbjct: 206 EQLIKEVLAE 215
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-------RDHEADPNLRNIELEGSF 218
T ++ + + G +IGKGG K + ++TGA++ + D + R + ++G+
Sbjct: 238 TFQMKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPLHLPAGDTSTE---RTVHIDGTP 294
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAG 247
EQI+ A +V E+ A+NP + G
Sbjct: 295 EQIESAKQLVIEVTSE---NRARNPMSGG 320
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 78 PSRNMAVPPP------ASNGPTVVKSRMCN-------RLNSAEGCKFGDKCHFAHGEWEL 124
PS +VPPP A + +R+ N R+++ +GD F+ E
Sbjct: 54 PSSYNSVPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGDNKGFSSYPSE- 112
Query: 125 GKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGA--SATAKISVDASLAGAIIGK 182
GK ++ G VP + S+G+ T KI + G IIGK
Sbjct: 113 GKQMS---------GTVPSSI------------PVSYGSFQGTTKKIDIPNMRVGVIIGK 151
Query: 183 GGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
GG K + Q+GAK+ + RD +ADPN R ++L G+ +QI +A ++ +++
Sbjct: 152 GGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVL 204
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHE---ADPN-LRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K + +TGA++ + DP R ++++G EQI+ A +V E+I
Sbjct: 242 GLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEII 301
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQI 221
A+ KI + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL GS + I
Sbjct: 122 ASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAI 181
Query: 222 KQASAMVRELIVR 234
A ++ E++
Sbjct: 182 ATAEKLINEVLAE 194
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADP----NLRNIELEGSFEQIKQASAMVRELI 232
G +IGKGG K + TGA++ + P R +++EG+ EQI+ A MV ++I
Sbjct: 226 GLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVI 285
Query: 233 VRIGPAHAKNPATAG 247
G +NPA +G
Sbjct: 286 S--GENRHRNPAMSG 298
>gi|356511656|ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Glycine max]
Length = 345
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY----------NAVAQMMN-LPQ 73
+ + + K K C K+++ CP+G+ C FLH P + A++ N P+
Sbjct: 138 DDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTAISIGTNGSPK 197
Query: 74 AVPAPSRNMAVPPPASNG---------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ S N+ + G T K+++C + + C FGD CHFAHG+ EL
Sbjct: 198 SYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAEL 257
Query: 125 GKP 127
P
Sbjct: 258 QVP 260
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
S+ +KTKLC F G C FGD CHFAHG AEL+
Sbjct: 225 STYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQ 258
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 237 PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
P ++PA +H FKT++C F G+C G+ C+FAHG ++R+
Sbjct: 67 PRMIQHPALNKGTSHIF---FKTRICAKFRAGACRNGENCNFAHGLEDMRQ 114
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 28 SGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPP 87
S + K++ C KF + A C GE+C+F H G + N + V RN PP
Sbjct: 80 SHIFFKTRICAKFRAGA-CRNGENCNFAH---GLEDMRQPPPNWQELVGL--RNEERPPT 133
Query: 88 A----SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ + K ++C + + E C +GDKC F H +
Sbjct: 134 MGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHED 171
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 160 SFGASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELE 215
S+G T+K I + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL
Sbjct: 130 SYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELM 189
Query: 216 GSFEQIKQASAMVRELI 232
G+ +QI +A ++ +++
Sbjct: 190 GTPDQIAKAEQLINDVL 206
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN----LRNIELEGSFEQIKQA 224
+ V + G IIGKGG K + +TGA++ + P R ++++G+ EQI+ A
Sbjct: 232 MKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESA 291
Query: 225 SAMVRELIV--RIGPAHAKNPATAG 247
+V E+I RI +NPA AG
Sbjct: 292 KQLVNEVISENRI-----RNPAMAG 311
>gi|115474895|ref|NP_001061044.1| Os08g0159800 [Oryza sativa Japonica Group]
gi|75243377|sp|Q84UQ3.1|C3H56_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 56;
Short=OsC3H56
gi|29467558|dbj|BAC66728.1| putative zinc finger protein [Oryza sativa Japonica Group]
gi|37806157|dbj|BAC99662.1| putative zinc finger protein [Oryza sativa Japonica Group]
gi|113623013|dbj|BAF22958.1| Os08g0159800 [Oryza sativa Japonica Group]
Length = 367
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYN---AVAQMMNLPQAVPAPSRNMAVPPPAS 89
K + C KF++ GCP+G++C FLH A++ ++ S N A AS
Sbjct: 171 KGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAAS 230
Query: 90 ------NGP----TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
NGP + K+R+CN+ C FG KCHFAHG EL K
Sbjct: 231 ASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL K
Sbjct: 244 SNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 88 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 118
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 29/113 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF-------PGGYNAVAQMMNLPQAVPAPSRNMAVP 85
K+K C KF CP+ +C+F H P VA +A +P
Sbjct: 89 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEA----REEHQIP 143
Query: 86 PPASNGPT-----------------VVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+GPT K R C + + EGC +GD C F H E
Sbjct: 144 IMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDE 196
>gi|125602265|gb|EAZ41590.1| hypothetical protein OsJ_26123 [Oryza sativa Japonica Group]
Length = 367
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYN---AVAQMMNLPQAVPAPSRNMAVPPPAS 89
K + C KF++ GCP+G++C FLH A++ ++ S N A AS
Sbjct: 171 KGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAAS 230
Query: 90 ------NGP----TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
NGP + K+R+CN+ C FG KCHFAHG EL K
Sbjct: 231 ASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL K
Sbjct: 244 SNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 88 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 118
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 29/113 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF-------PGGYNAVAQMMNLPQAVPAPSRNMAVP 85
K+K C KF CP+ +C+F H P VA +A +P
Sbjct: 89 KTKLCCKF-RAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATEA----REEHQIP 143
Query: 86 PPASNGPT-----------------VVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+GPT K R C + + EGC +GD C F H E
Sbjct: 144 IMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDE 196
>gi|383154752|gb|AFG59517.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
Length = 69
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNMA-----VPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR VP P + K+R+CNR + E C FGDKCH
Sbjct: 2 NAIPQMPTLGNTFAAGSRKTVGLTPGVPSLDKPDPGLGYKTRLCNRFGTVEKCMFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAEL 285
+KT+LC F C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRFGTVEKCMFGDKCHFAHGEKEL 69
>gi|312283483|dbj|BAJ34607.1| unnamed protein product [Thellungiella halophila]
Length = 391
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 47/243 (19%)
Query: 70 NLPQAVPAPSRNMAVPPPASNGPTVV--KSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
N P VP+ + PPP + G + K+RMC + A C+ G+ C+FAHG +L +P
Sbjct: 88 NNPSMVPSLN-----PPPVNKGTANIFYKTRMCAKF-KAGTCRNGELCNFAHGIEDLRQP 141
Query: 128 IAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNS 187
P + + G PP + +S++ + +
Sbjct: 142 -------PSNWQEIVG--------PPVQDRERERERERERERERPSSVS--VGNNWEDDQ 184
Query: 188 KQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL-IVRIGPAHAKNPATA 246
K I R + E R + + ++ S RE ++ +G + A +P
Sbjct: 185 KIILRMKLCRKFCFGEECPYGERCNFIHEDLSKFREESGKPRESSVISVGTSVADSPCVE 244
Query: 247 -GSAAH---------------PLSSN-----FKTKLCGNFAKGSCTFGDRCHFAHGAAEL 285
G+ A+ P++SN +KT+LC F G C FGD C FAHG AEL
Sbjct: 245 NGTTAYNQIDVNRQGGIPVPAPINSNGGVKFWKTRLCMKFEIGQCPFGDNCSFAHGQAEL 304
Query: 286 RKT 288
+
Sbjct: 305 HNS 307
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 43/180 (23%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHY--------------------------- 57
E + + + K C KF CP+GE C+F+H
Sbjct: 181 EDDQKIILRMKLCRKFCFGEECPYGERCNFIHEDLSKFREESGKPRESSVISVGTSVADS 240
Query: 58 --FPGGYNAVAQM-MNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDK 114
G A Q+ +N +P P+ P ++ G K+R+C + + C FGD
Sbjct: 241 PCVENGTTAYNQIDVNRQGGIPVPA-----PINSNGGVKFWKTRLCMKFEIGQ-CPFGDN 294
Query: 115 CHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDAS 174
C FAHG+ EL ++ D A AV + P +F TA+++ D+S
Sbjct: 295 CSFAHGQAELHN--SLGRVDGEAVNAVASVIKQTVAP-----ANEAFAMKPTAQVTADSS 347
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSF 218
G+ + KI V G IIGKGG K + Q+GAK+ + RD +ADPN R +EL G+
Sbjct: 134 GSGLSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTP 193
Query: 219 EQIKQASAMVRELI 232
EQI +A ++ +++
Sbjct: 194 EQIAKAEQLINDVL 207
>gi|361069225|gb|AEW08924.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154744|gb|AFG59513.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154746|gb|AFG59514.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154748|gb|AFG59515.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154750|gb|AFG59516.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154754|gb|AFG59518.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154756|gb|AFG59519.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154758|gb|AFG59520.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154760|gb|AFG59521.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154762|gb|AFG59522.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154764|gb|AFG59523.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154766|gb|AFG59524.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154768|gb|AFG59525.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154770|gb|AFG59526.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154772|gb|AFG59527.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154774|gb|AFG59528.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154776|gb|AFG59529.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
gi|383154778|gb|AFG59530.1| Pinus taeda anonymous locus CL2297Contig1_03 genomic sequence
Length = 69
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNMA-----VPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR VP P + K+R+CNR + E C FGDKCH
Sbjct: 2 NAIPQMPTLGNTFAAGSRKTVGLTPGVPSLDKPDPGLGYKTRLCNRFGTDEKCMFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAEL 285
+KT+LC F C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRFGTDEKCMFGDKCHFAHGEKEL 69
>gi|357477983|ref|XP_003609277.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510332|gb|AES91474.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 270
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 11 TGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMN 70
G+ + G + H + + K C + + CP+G++C FLH P + + +
Sbjct: 95 VGLRSEGRMQLGNHAKDKKIIQTMKLCKNYCNGEECPYGDNCIFLHEDPAQFRDDSLKLR 154
Query: 71 LPQAVPAPSRNM----AVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
A+ + N+ A+ A + T K+++C C FG C FAHGE EL
Sbjct: 155 ECSAITIETNNLEGSRALNKQARS--TYRKTKLCRNWKHTGYCSFGMNCLFAHGEEELQV 212
Query: 127 P 127
P
Sbjct: 213 P 213
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KT++C F G+C G C+FAHGA ELR+
Sbjct: 56 YKTRICTKFRFGTCRNGQNCNFAHGAEELRQ 86
>gi|255573451|ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223532956|gb|EEF34722.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 349
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 27 ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPP 86
ES K + C KF++ GCP+G++C FLH N + ++L
Sbjct: 154 ESQRSYKGRHCKKFYTEEGCPYGDNCTFLH-DEQSKNRESVAISLGPGGYGGGGGGGAGS 212
Query: 87 PASNG--------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+G P+ K+R+CN+ C FG+KCHFAHG EL
Sbjct: 213 GNGSGGGSAGNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAEL 258
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHGAAEL +
Sbjct: 227 SNWKTRICNKWELTGYCPFGNKCHFAHGAAELHR 260
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 87 FKTKLCCKFRAGTCPYITNCNFAHSIEELRR 117
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 160 SFGASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELE 215
S+G T+K I + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL
Sbjct: 130 SYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELM 189
Query: 216 GSFEQIKQASAMVRELI 232
G+ +QI +A ++ +++
Sbjct: 190 GTPDQIAKAEQLINDVL 206
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN----LRNIELEGSFEQIKQA 224
+ V + G IIGKGG K + +TGA++ + P R ++++G+ EQI+ A
Sbjct: 232 MKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESA 291
Query: 225 SAMVRELIVRIGPAHAKNPATAG 247
+V E+I +NPA AG
Sbjct: 292 KQLVNEVISE---NRIRNPAMAG 311
>gi|376339075|gb|AFB34066.1| hypothetical protein CL2297Contig1_03, partial [Pinus mugo]
Length = 69
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNMA-----VPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR VP P + K+R+CNR + E C FGDKCH
Sbjct: 2 NAIPQMPTLGSTFGAGSRKTVGLTPGVPSLDKPDPGLGYKTRLCNRFGTDEKCMFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAEL 285
+KT+LC F C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRFGTDEKCMFGDKCHFAHGEKEL 69
>gi|376339067|gb|AFB34062.1| hypothetical protein CL2297Contig1_03, partial [Pinus mugo]
gi|376339069|gb|AFB34063.1| hypothetical protein CL2297Contig1_03, partial [Pinus mugo]
gi|376339071|gb|AFB34064.1| hypothetical protein CL2297Contig1_03, partial [Pinus mugo]
gi|376339073|gb|AFB34065.1| hypothetical protein CL2297Contig1_03, partial [Pinus mugo]
Length = 69
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 63 NAVAQMMNLPQAVPAPSRNMA-----VPPPASNGPTV-VKSRMCNRLNSAEGCKFGDKCH 116
NA+ QM L A SR VP P + K+R+CNR + E C FGDKCH
Sbjct: 2 NAIPQMPTLGNTFGAGSRKTVGLTPGVPSLDKPDPGLGYKTRLCNRFGTDEKCMFGDKCH 61
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 62 FAHGEKEL 69
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAEL 285
+KT+LC F C FGD+CHFAHG EL
Sbjct: 40 YKTRLCNRFGTDEKCMFGDKCHFAHGEKEL 69
>gi|356565198|ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Glycine max]
Length = 347
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY----------NAVAQMMN-LPQ 73
+ + + K K C K+++ CP+G+ C FLH P + +++ N P+
Sbjct: 138 DDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTSISIGTNGSPK 197
Query: 74 AVPAPSRNMAVPPPASNG---------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ S N+ + G T K+++C + + C FGD CHFAHG+ EL
Sbjct: 198 SYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAEL 257
Query: 125 GKP 127
P
Sbjct: 258 QVP 260
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 88/238 (36%), Gaps = 69/238 (28%)
Query: 79 SRNMAVPPPASNGPTV--------VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAI 130
S MA PP P V K+R+C + C+ G+ C+FAHG ++ +P
Sbjct: 60 SNAMACPPRMIQHPAVNKGTSHIFFKTRICAKFRVG-ACRNGENCNFAHGLEDMRQP--- 115
Query: 131 SHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQI 190
P + + G G E PP G D II K + K
Sbjct: 116 ----PPNWQELVGLRGE--ERPPMAG---------------DWDDDQKIIHKMKLCKKYY 154
Query: 191 CRQT---GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAG 247
+ G K S HE DP + + S RE I +P + G
Sbjct: 155 NGEECPYGDKCSFL-HE-DP-----------ARFRDDSVRYRE-STSISIGTNGSPKSYG 200
Query: 248 SAAHPLSSN------------------FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
A++ L SN +KTKLC F G C FGD CHFAHG AEL+
Sbjct: 201 DASNNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQ 258
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 237 PAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
P ++PA +H FKT++C F G+C G+ C+FAHG ++R+
Sbjct: 67 PRMIQHPAVNKGTSHIF---FKTRICAKFRVGACRNGENCNFAHGLEDMRQ 114
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQI 221
++ KI + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL G+ +QI
Sbjct: 135 SSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQI 194
Query: 222 KQASAMVRELI 232
+A ++ +++
Sbjct: 195 AKAEQLINDVL 205
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADP----NLRNIELEGSFEQIKQASAMVRELI 232
G +IGKGG K + +TGA++ + P R ++++GS EQI+ A +V E+I
Sbjct: 239 GLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVI 298
>gi|358334834|dbj|GAA53260.1| far upstream element-binding protein [Clonorchis sinensis]
Length = 664
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T + +V A AG +IGKGG + K+ICR +GA + I ++ DP ++ + G+ +
Sbjct: 293 YDGQETTQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPTIKIFNVRGNRQ 352
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAAHP 252
+I QA M+ E R G + PATAG+A+ P
Sbjct: 353 EIDQAIRMISE---RAGIPMTR-PATAGAASGP 381
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEG 216
++ S++ KI + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL G
Sbjct: 135 TYLGSSSKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMG 194
Query: 217 SFEQIKQASAMVRELI 232
+ +QI +A ++ E++
Sbjct: 195 NPDQIAKAEQLISEVL 210
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIR-------DHEADPNLRNIELEGSFEQIKQASAMV 228
G +IGKGG + K + +TGA++ + D D RN+ +EG+ EQI+ A +V
Sbjct: 243 VGLVIGKGGDSIKNMQARTGARIQVIPLHLPPGDTSTD---RNVHIEGTSEQIELAKQLV 299
Query: 229 RELI 232
E I
Sbjct: 300 NEAI 303
>gi|224088888|ref|XP_002308575.1| predicted protein [Populus trichocarpa]
gi|222854551|gb|EEE92098.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI + G IIGKGG K + Q+GAK+ + RD +ADPN R +EL G+ EQI +A
Sbjct: 140 KIDIPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRMVELMGTPEQIAKA 199
Query: 225 SAMVRELI 232
++ +++
Sbjct: 200 EQLINDVL 207
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIK 222
+ KI + G IIGK G + I Q+GAK+ + RDHEA+P R +EL G EQI
Sbjct: 140 SKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQIS 199
Query: 223 QASAMVRELIVRIGPAHAKNPATAG--SAAHPLSSNFKTKLCGN 264
+A +++E++ + + +A P + F+ K+ N
Sbjct: 200 KAEQLIKEVLAEADAGSSGAGSGGRKYNATQPGAETFQMKIANN 243
>gi|297670563|ref|XP_002813434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 464
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELE 215
G A G T ++++ LAG++IGKGG KQIC ++GA + I + R I +
Sbjct: 377 GSYADLGGPITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKIDEPLEGSEDRIITIT 436
Query: 216 GSFEQIKQASAMVR 229
G+ EQI+ A +++
Sbjct: 437 GTQEQIQNAQYLLQ 450
>gi|356495861|ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Glycine max]
Length = 368
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPAS--- 89
K + C KF++ GCP+G+SC FLH N + ++L
Sbjct: 170 KGRHCKKFYTEEGCPYGDSCTFLH-DEQSKNRESVAISLGPGGYGGGGGGGGGVGGGASG 228
Query: 90 -------------NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ P+ K+R+CN+ C FG+KCHFAHG EL
Sbjct: 229 GNGGANAAGNGPNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATEL 276
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHGA EL +
Sbjct: 245 SNWKTRICNKWEMTGYCPFGNKCHFAHGATELHR 278
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 20 KKSKHESESGVGS-----------KSKPCTKFFSTAGCPFGESCHFLHYF------PGGY 62
KKS++ S+ G S K+K C KF CP+ +C+F H P +
Sbjct: 70 KKSRNSSQEGSSSNRSKAIGKMFFKTKLCCKF-RAGTCPYITNCNFAHSIEELRRPPPNW 128
Query: 63 NAVAQMMNLPQAV--PAPSRNMAVPPPAS---NGPTVVKS---RMCNRLNSAEGCKFGDK 114
+ +AV P +P S +G + +S R C + + EGC +GD
Sbjct: 129 QEIVAAHEEEKAVMIEPPREEFQIPTVGSTTFSGEMMQRSYKGRHCKKFYTEEGCPYGDS 188
Query: 115 CHFAHGE 121
C F H E
Sbjct: 189 CTFLHDE 195
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 93 FKTKLCCKFRAGTCPYITNCNFAHSIEELRR 123
>gi|395733402|ref|XP_003776232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Pongo
abelii]
Length = 462
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELE 215
G A G T ++++ LAG++IGKGG KQIC ++GA + I + R I +
Sbjct: 377 GSYADLGGPITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKIDEPLEGSEDRIITIT 436
Query: 216 GSFEQIKQASAMVR 229
G+ EQI+ A +++
Sbjct: 437 GTQEQIQNAQYLLQ 450
>gi|359474468|ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Vitis vinifera]
Length = 372
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 27 ESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPG-GYNAVAQMMNLPQAVPAPSRNMAVP 85
E+ K + C KF++ GCP+G++C FLH +VA +
Sbjct: 172 ETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGGGGGGGGGG 231
Query: 86 PPASNG------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFG 139
G P+ K+R+CN+ C FG KCHFAHG EL + D+ R
Sbjct: 232 GGGGGGSGSNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGELHRYGGGLVDESRDST 291
Query: 140 AVP--GRMGGRYEPPPA 154
+ P + GG PP+
Sbjct: 292 SAPPDSKQGGVPSKPPS 308
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHG EL +
Sbjct: 245 SNWKTRICNKWELTGYCPFGSKCHFAHGMGELHR 278
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAVPA-PSRNMAVP 85
K+K C KF CP+ +C+F H P + + + + V + P +P
Sbjct: 104 KTKLCCKF-RAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIP 162
Query: 86 PPASNGPTV-----VKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+ V K R C + + EGC +GD C F H E
Sbjct: 163 SIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDE 203
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 103 FKTKLCCKFRAGTCPYVTNCNFAHSIQELRR 133
>gi|395733400|ref|XP_003776231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 466
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP PG S+ G T ++++ LAG+IIGKGG KQIC ++GA
Sbjct: 361 YEPHGGPGYVYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGAS 420
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ EQI+ A +++
Sbjct: 421 IKIDEPLEGSEDRIITITGTQEQIQNAQYLLQ 452
>gi|395733398|ref|XP_003776230.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Pongo abelii]
Length = 464
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP PG S+ G T ++++ LAG+IIGKGG KQIC ++GA
Sbjct: 361 YEPHGGPGYVYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGAS 420
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ EQI+ A +++
Sbjct: 421 IKIDEPLEGSEDRIITITGTQEQIQNAQYLLQ 452
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 136 RAFGAVPGRMGGRYEPPPAPGPAA---SFGASATAK-ISVDASLAGAIIGKGGVNSKQIC 191
+ F + P +G + P P+A S+G T+K I + G IIGKGG K +
Sbjct: 67 KGFSSAPSDVG---QKPMISTPSAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQ 123
Query: 192 RQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
Q+GAK+ + RD +ADPN R +EL G+ +QI +A ++ +++
Sbjct: 124 LQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIAKAEQLINDVL 167
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN----LRNIELEGSFEQIKQASAMVREL 231
G IIGKGG K + +TGA++ + P R ++++G+ EQI+ A +V E+
Sbjct: 200 VGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEV 259
Query: 232 IVRIGPAHAKNPATA 246
I NP
Sbjct: 260 ISEWLLVILMNPLVV 274
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSFEQ 220
S T KI + G IIGK G K + Q+GAK+ + RD + P R+++L G+ EQ
Sbjct: 142 STTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQ 201
Query: 221 IKQASAMVRELIVRIGPAHAKNPATAG----SAAHPLSSNFKTKLCGN 264
I +A ++R+++ A A + T +A P + F+ ++ N
Sbjct: 202 ISRAEELIRDVLAE---ADAGSSGTVSNRKYNAPQPGAEQFQMQIANN 246
>gi|76155981|gb|AAX27228.2| SJCHGC01962 protein [Schistosoma japonicum]
Length = 275
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 7 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 66
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 67 EIEQAIRMISE 77
>gi|357516999|ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355522810|gb|AET03264.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 376
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 27/126 (21%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNL------------- 71
ES + K + C KF++ GCP+G+SC FLH N + ++L
Sbjct: 162 ESMNNRSYKGRHCKKFYTEEGCPYGDSCTFLH-DEQSKNRESVAISLGPGGYGGGGGGGG 220
Query: 72 ---------PQAVPAPSRNMAVPPPASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFA 118
+ A NGP + K+R+CN+ C FG+KCHFA
Sbjct: 221 GGGGSVGSGVGSGSGVVVVAAGAAAVGNGPNLKPSNWKTRICNKWEMTGYCPFGNKCHFA 280
Query: 119 HGEWEL 124
HG EL
Sbjct: 281 HGATEL 286
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHGA EL +
Sbjct: 255 SNWKTRICNKWEMTGYCPFGNKCHFAHGATELHR 288
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAV-PAPSRNMAVP 85
K+K C KF CP+ +C+F H P + + ++V P +P
Sbjct: 94 KTKLCCKF-RVGTCPYITNCNFAHSVEELRRPPENWQEIVAAHEEERSVIEQPREEFQIP 152
Query: 86 PPASN---GPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGE 121
S+ G ++ K R C + + EGC +GD C F H E
Sbjct: 153 TVGSSTFVGESMNNRSYKGRHCKKFYTEEGCPYGDSCTFLHDE 195
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 93 FKTKLCCKFRVGTCPYITNCNFAHSVEELRR 123
>gi|297738922|emb|CBI28167.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
+ + + K K C KF++ CP+G+ C+FLH P + + P+ A S
Sbjct: 40 DEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSAR---PRESFAISIGTTG 96
Query: 85 PPPASNG---------------------------PTVVKSRMCNRLNSAEGCKFGDKCHF 117
PP PT K+++C + + C FG+KCHF
Sbjct: 97 PPMEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHF 156
Query: 118 AHGEWEL 124
AHG+ EL
Sbjct: 157 AHGQAEL 163
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
+KTKLC + G C FG++CHFAHG AEL+ T
Sbjct: 134 WKTKLCCKWETTGHCPFGEKCHFAHGQAELQMT 166
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH-------------YFPGGYNAVAQMMNLPQAVPAPS 79
K+K C K+ +T CPFGE CHF H V +LP +P+
Sbjct: 135 KTKLCCKWETTGHCPFGEKCHFAHGQAELQMTGGGGGGGGWAEAEVGNTCSLPAKLPSVP 194
Query: 80 RNMAVPPPASNGPTVVKSRMCNRL 103
N++ PP G + R +L
Sbjct: 195 ANVSTPPELGTGAPINPERQNKKL 218
>gi|58270386|ref|XP_572349.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228607|gb|AAW45042.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 912
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
+++PC KFF+ CP GE C FLH P P+ + + + A P G
Sbjct: 715 RTRPC-KFFAEGHCPHGEECTFLHIIPASS---------PEPLSSSDSDSADYKPKGQGN 764
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+K+ C NSA GC GD C F H
Sbjct: 765 RRLKTLPCKFFNSAAGCINGDDCAFLH 791
>gi|134117848|ref|XP_772305.1| hypothetical protein CNBL1730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254918|gb|EAL17658.1| hypothetical protein CNBL1730 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 912
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
+++PC KFF+ CP GE C FLH P P+ + + + A P G
Sbjct: 715 RTRPC-KFFAEGHCPHGEECTFLHIIPASS---------PEPLSSSDSDSADYKPKGQGN 764
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+K+ C NSA GC GD C F H
Sbjct: 765 RRLKTLPCKFFNSAAGCINGDDCAFLH 791
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEG 216
S+G+S KI + G +IGKGG K + Q+GAK+ + RD +ADPN R +EL G
Sbjct: 83 SYGSSK--KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMG 140
Query: 217 SFEQIKQASAMVRELIVR 234
+ + + A ++ E++
Sbjct: 141 TPDAVSSAEKLINEVLAE 158
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 76 PAPSRNMAVPPPASNGPTVVKSR---MCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISH 132
P PS N VPPPA+ ++K R + RL S +++ G P
Sbjct: 36 PPPSYNN-VPPPATADFELIKQRAQQVAARLLSGAAAP---SDVVKRTKFDNGPPSPYDS 91
Query: 133 DDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICR 192
D ++ A P + P+ S S + KI + G IIGKGG K +
Sbjct: 92 SDLKSQYAAPMSI-----------PSYSHQGS-SKKIEIPNGRVGVIIGKGGETIKYLQL 139
Query: 193 QTGAKLSI-RDHEADPNLRN--IELEGSFEQIKQASAMVRELIVR 234
Q+GAK+ + RD +ADPN N +EL G+ + I A +++E++
Sbjct: 140 QSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATAEKLIKEVLAE 184
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADP----NLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K + TGA++ + P R +++EG+ EQI+ A +V ++
Sbjct: 216 GLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESAKQLVDSIL 275
Query: 233 VRIGPAHAKNPATAG 247
G +NP+ +G
Sbjct: 276 S--GENRLRNPSMSG 288
>gi|256078991|ref|XP_002575775.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043996|emb|CCD81542.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 110 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 169
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 170 EIEQAIRMISE 180
>gi|401414821|ref|XP_003871907.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488128|emb|CBZ23374.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 371
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
++N+KT+LC +FA+G C GD+C+FAHG ELR
Sbjct: 205 NANYKTRLCKSFAEGHCNRGDQCNFAHGVGELR 237
>gi|298705632|emb|CBJ28880.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 586
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 239 HAKNPATAGSAAHPLSS----NFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTAI 290
AK P + P SS N KT+LC N+ GSCTFGDRC FAHG +++ +
Sbjct: 16 QAKTPKSKSKKGIPSSSIIEHNRKTELCRNYENGSCTFGDRCAFAHGLDDIKHKTL 71
>gi|146076675|ref|XP_001462974.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067056|emb|CAM65320.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 361
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
++N+KT+LC +FA+G C GD+C+FAHG ELR
Sbjct: 204 NANYKTRLCKSFAEGHCNRGDQCNFAHGVGELR 236
>gi|398010016|ref|XP_003858206.1| hypothetical protein, conserved [Leishmania donovani]
gi|322496412|emb|CBZ31482.1| hypothetical protein, conserved [Leishmania donovani]
Length = 361
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
++N+KT+LC +FA+G C GD+C+FAHG ELR
Sbjct: 204 NANYKTRLCKSFAEGHCNRGDQCNFAHGVGELR 236
>gi|297846208|ref|XP_002890985.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336827|gb|EFH67244.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 27/127 (21%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSR----- 80
+ESG K + C KF++ GCP+GESC FL + N + ++L
Sbjct: 168 AESGRSFKGRHCKKFYTEEGCPYGESCTFL-HDEASRNRESVAISLGPGGYGSGGGGGGS 226
Query: 81 -------------NMAVPPPASNG--------PTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
N+ V P+ K+R+CN+ C FG KCHFAH
Sbjct: 227 GGGSGGGGGGSSSNVVVLGGGGGSGSGINILKPSNWKTRICNKWEITGYCPFGAKCHFAH 286
Query: 120 GEWELGK 126
G EL +
Sbjct: 287 GAAELHR 293
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL +
Sbjct: 260 SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 293
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 93 FKTKLCCKFRAGTCPYITNCNFAHTVEELRR 123
>gi|225445436|ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Vitis vinifera]
Length = 349
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
+ + + K K C KF++ CP+G+ C+FLH P + + P+ A S
Sbjct: 141 DEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSAR---PRESFAISIGTTG 197
Query: 85 PPPASNG---------------------------PTVVKSRMCNRLNSAEGCKFGDKCHF 117
PP PT K+++C + + C FG+KCHF
Sbjct: 198 PPMEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHF 257
Query: 118 AHGEWEL 124
AHG+ EL
Sbjct: 258 AHGQAEL 264
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
+KTKLC + G C FG++CHFAHG AEL+ T
Sbjct: 235 WKTKLCCKWETTGHCPFGEKCHFAHGQAELQMT 267
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 234 RIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
RI P +A P + G++ + FKT++C F G C G+ C+FAHG ++R+
Sbjct: 70 RIHPPNA--PTSRGTS----NIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQ 117
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH-------------YFPGGYNAVAQMMNLPQAVPAPS 79
K+K C K+ +T CPFGE CHF H V +LP +P+
Sbjct: 236 KTKLCCKWETTGHCPFGEKCHFAHGQAELQMTGGGGGGGGWAEAEVGNTCSLPAKLPSVP 295
Query: 80 RNMAVPPPASNGPTVVKSRMCNRL 103
N++ PP G + R +L
Sbjct: 296 ANVSTPPELGTGAPINPERQNKKL 319
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 159 ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELE 215
+S + T K+ V S G +IGK G + + +GAK+ I RD EADPN R +E+
Sbjct: 181 SSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEII 240
Query: 216 GSFEQIKQASAMVRELIVR 234
G+ E IK+A ++ +I
Sbjct: 241 GTSENIKKAEELINAVIAE 259
>gi|14018368|emb|CAC38358.1| zinc finger protein [Pisum sativum]
Length = 207
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVP 85
+ + K K C K+ + CP+G +C+FLH P + A+ + N
Sbjct: 100 DDEKIIQKMKLCKKYCNGEICPYGNNCNFLHENPAKFRDDPWKTRESSAISIETCNNLEG 159
Query: 86 PPASNGP---TVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
A + T K+++C R + C FG+ CHFAHG+
Sbjct: 160 SRAGSKQERGTYWKTKICLRWKNTGSCPFGNGCHFAHGD 198
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT++C F GSC G+ C +AHGA E+R+
Sbjct: 45 FKTRICTKFGLGSCRNGENCTYAHGADEIRQ 75
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 245 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 304
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 305 EIEQAIRMISE 315
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + ++ G +IGKGG Q+ T K+ I +A R + L G+ +QI A
Sbjct: 76 VTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQI--SQAGTPERTVTLTGTPQQIDHA 133
Query: 225 SAMVRELIVRIG 236
M+ ++I R G
Sbjct: 134 KQMIGDIIERAG 145
>gi|360043994|emb|CCD81540.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 265 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 324
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 325 EIEQAIRMISE 335
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 268 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 327
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 328 EIEQAIRMISE 338
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + ++ G +IGKGG Q+ T K+ I +A R + L G+ +QI A
Sbjct: 99 VTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI--SQAGTPERTVTLTGTPQQIDHA 156
Query: 225 SAMVRELIVRIG 236
M+ ++I R G
Sbjct: 157 KQMIGDIIERAG 168
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 267 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 326
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 327 EIEQAIRMISE 337
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + ++ G +IGKGG Q+ T K+ I +A R + L G+ +QI A
Sbjct: 98 VTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQI--SQAGTPERTVTLTGTPQQIDHA 155
Query: 225 SAMVRELIVRIG 236
M+ ++I R G
Sbjct: 156 KQMIGDIIERAG 167
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFE 219
+ T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++ + G+ +
Sbjct: 267 YDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQ 326
Query: 220 QIKQASAMVRE 230
+I+QA M+ E
Sbjct: 327 EIEQAIRMISE 337
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + ++ G +IGKGG Q+ T K+ I +A R + L G+ +QI A
Sbjct: 98 VTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQI--SQAGTPERTVTLTGTPQQIDHA 155
Query: 225 SAMVRELIVRIG 236
M+ ++I R G
Sbjct: 156 KQMIGDIIERAG 167
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
M GRY +P PA T +++ L GAIIGKGG ++ ++GA++ + H
Sbjct: 355 MMGRY----SPIPAMQTTQVETTDVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHR 410
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELI 232
+ R I + G+ EQI+ A ++++ +
Sbjct: 411 DNGGDRIITISGTREQIQAAQYLLQQCV 438
>gi|118371099|ref|XP_001018749.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89300516|gb|EAR98504.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1823
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 217 SFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPL------SSNFKTKLCGNFAKGSC 270
S E++K+A + + + ++ N S AH L +S FKT +C F KGSC
Sbjct: 90 SQEELKEAPNLKKTKLCQMFAKGKCNLGNHCSFAHGLEQLRSTNSFFKTTICVGFTKGSC 149
Query: 271 TFGDRCHFAHGAAELR 286
GD C +AHG +ELR
Sbjct: 150 QNGDSCRYAHGESELR 165
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
KTKLC FAKG C G+ C FAHG +LR T
Sbjct: 102 KTKLCQMFAKGKCNLGNHCSFAHGLEQLRST 132
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 253 LSSN--FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
LS+N KTK+C F +CT GD+C +AH EL++
Sbjct: 60 LSNNAFHKTKICPYFLNANCTKGDKCVYAHSQEELKE 96
>gi|357477973|ref|XP_003609272.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510327|gb|AES91469.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 231
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 28/102 (27%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVP 85
+ + +K K C K+ + CP+G+ C FLH P +
Sbjct: 108 EDKKIINKMKLCKKYCNGEKCPYGDKCKFLHEDPAQFRG--------------------- 146
Query: 86 PPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
T K+++C + C FG CHFAHGE EL P
Sbjct: 147 -------TYRKTKLCLKWKDTGYCSFGKNCHFAHGEEELQVP 181
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 30 VGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPAS 89
+ K++ CTKF A C G +C+F H G + Q P P+ V P
Sbjct: 62 IFYKTRICTKFIFGA-CRNGTNCNFAH----GAEEIRQ--------PPPNSQKLVGPCNE 108
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ + K ++C + + E C +GDKC F H +
Sbjct: 109 DKKIINKMKLCKKYCNGEKCPYGDKCKFLHED 140
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KT++C F G+C G C+FAHGA E+R+
Sbjct: 64 YKTRICTKFIFGACRNGTNCNFAHGAEEIRQ 94
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KTKLC + G C+FG CHFAHG EL+
Sbjct: 150 KTKLCLKWKDTGYCSFGKNCHFAHGEEELQ 179
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
M GRY P PA T ++++ L GAIIGKGG ++ ++GA++ + H
Sbjct: 182 MMGRYSPIPA---------MQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHR 232
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELI 232
+ R I + G+ EQI+ A ++++ +
Sbjct: 233 DNGGDRIITISGTREQIQAAQYLLQQCV 260
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
S T +I V +S G +IGKGG + + +GAK+ I RD EADP+ LR +E+ G+
Sbjct: 231 STTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSC 290
Query: 221 IKQASAMVRELIVRI 235
I++A ++ +I +
Sbjct: 291 IEKAEKLINAVIAEV 305
>gi|42569638|ref|NP_181086.2| zinc finger CCCH domain-containing protein 28 [Arabidopsis
thaliana]
gi|75251253|sp|Q5PP65.1|C3H28_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 28;
Short=AtC3H28
gi|56121890|gb|AAV74226.1| At2g35430 [Arabidopsis thaliana]
gi|58331803|gb|AAW70399.1| At2g35430 [Arabidopsis thaliana]
gi|330254014|gb|AEC09108.1| zinc finger CCCH domain-containing protein 28 [Arabidopsis
thaliana]
Length = 252
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 33 KSKPCTKFFSTAGCPF-GESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRN-----MAVPP 86
K+K C KF CP+ SCHF H N + V SRN +++ P
Sbjct: 73 KTKLCFKF-RAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 131
Query: 87 PASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ T+ K+R+CN+ + C FG CHFAHG EL
Sbjct: 132 RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSS-NFKTKLCGNF-AKGSCTFGDRC 276
E + +AS V +GP G+ A L S N+KT++C + G C FG C
Sbjct: 113 ETVTEASRNRESFAVSLGPR--------GNVAQTLKSPNWKTRICNKWQTTGYCPFGSHC 164
Query: 277 HFAHGAAEL 285
HFAHG +EL
Sbjct: 165 HFAHGPSEL 173
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAKGSCTF-GDRCHFAHGAAELR 286
S FKTKLC F G+C + CHFAH A ELR
Sbjct: 70 SFFKTKLCFKFRAGTCPYSASSCHFAHSAEELR 102
>gi|255073347|ref|XP_002500348.1| predicted protein [Micromonas sp. RCC299]
gi|226515611|gb|ACO61606.1| predicted protein [Micromonas sp. RCC299]
Length = 699
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+DA AG +IGK G N QI R++GA++++ HE+ R + +EG+ Q A +V++
Sbjct: 395 IDAQFAGGVIGKMGSNVGQIRRESGARITV--HESHGKFRVVAIEGTDRQCHDAKHLVQQ 452
Query: 231 LIVRIG----PAHAKNPAT 245
+ + G AH P+T
Sbjct: 453 AVTKQGGGPVGAHRIEPST 471
>gi|403365701|gb|EJY82640.1| Zinc finger protein [Oxytricha trifallax]
Length = 261
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
S NFKT++C NF SC +GD+C FAHG EL K
Sbjct: 191 SGNFKTQVCKNFLADSCKYGDKCSFAHGENELNK 224
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH--YFPGGYN------AVAQMMNLPQAVPAPSRNM-- 82
K+ C F ++ C G+ C F H + G+N A Q Q P R+
Sbjct: 122 KTALCRHFENSGQCSLGDKCSFAHGQHELRGFNDPVPAGASFQQNTFQQQ---PRRDNFG 178
Query: 83 ---AVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
++ G K+++C A+ CK+GDKC FAHGE EL K
Sbjct: 179 GQGGFQQRSNQGSGNFKTQVCKNF-LADSCKYGDKCSFAHGENELNK 224
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT LC +F G C+ GD+C FAHG ELR
Sbjct: 121 FKTALCRHFENSGQCSLGDKCSFAHGQHELR 151
>gi|32563991|ref|NP_492238.2| Protein GLA-3, isoform a [Caenorhabditis elegans]
gi|25005005|emb|CAB04667.2| Protein GLA-3, isoform a [Caenorhabditis elegans]
Length = 646
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 221 IKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFA 279
+ +++ +E+ V I P A +T G+ + F+TK+C ++ + GSC++GD C +A
Sbjct: 1 MSSSASKTQEISVVIDPRDALTNSTNGNKPNGPKPKFQTKICDHWRRSGSCSYGDACWYA 60
Query: 280 HGAAELRKTA 289
HG +LRK
Sbjct: 61 HGEDDLRKVV 70
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
M GRY P PA T ++++ L GAIIGKGG ++ ++GA++ + H
Sbjct: 251 MIGRYSPIPA---------MQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHR 301
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELI 232
+ R I + G+ EQI+ A ++++ +
Sbjct: 302 DNGGDRIITISGTREQIQAAQYLLQQCV 329
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 155 PGPAASFG--ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRN 211
PG + +G T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++
Sbjct: 260 PGGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKI 319
Query: 212 IELEGSFEQIKQASAMVRE 230
+ G+ ++I+QA M+ E
Sbjct: 320 FNVRGNRQEIEQAIRMISE 338
>gi|4539010|emb|CAB39631.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|7267703|emb|CAB78130.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 748
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
S T +I V +S G +IGKGG + + +GAK+ I RD EADP+ LR +E+ GS
Sbjct: 198 STTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVAC 257
Query: 221 IKQASAMVRELIVR 234
I+ A ++ +I
Sbjct: 258 IESAEKLISAVIAE 271
>gi|22328551|ref|NP_192745.2| KH domain-containing protein [Arabidopsis thaliana]
gi|332657435|gb|AEE82835.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 725
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
S T +I V +S G +IGKGG + + +GAK+ I RD EADP+ LR +E+ GS
Sbjct: 175 STTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVAC 234
Query: 221 IKQASAMVRELIVR 234
I+ A ++ +I
Sbjct: 235 IESAEKLISAVIAE 248
>gi|154344545|ref|XP_001568214.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065551|emb|CAM43320.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 304
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 251 HPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
H L+ +KTKLC N+ AKG C + RC FAHG ELR T
Sbjct: 36 HILAGRYKTKLCKNYVAKGECPYDVRCMFAHGEEELRTT 74
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 162 GASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGS 217
G T+K I + G IIGK G K + Q+GAK+ + RD +A P R +EL G+
Sbjct: 114 GYQGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGT 173
Query: 218 FEQIKQASAMVRELIVRIGPAHAKNPATAG-SAAHPLSSNFKTKLCGN 264
+QI +A ++ E++ A + N ++ +A P + F+ K+ N
Sbjct: 174 PDQISRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANN 221
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 162 GASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGS 217
G T+K I + G IIGK G K + Q+GAK+ + RD +A P R +EL G+
Sbjct: 98 GYQGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGT 157
Query: 218 FEQIKQASAMVRELIVRIGPAHAKNPATAG-SAAHPLSSNFKTKLCGN 264
+QI +A ++ E++ A + N ++ +A P + F+ K+ N
Sbjct: 158 PDQISRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANN 205
>gi|340505388|gb|EGR31720.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
S+ +KT LC +F G+C G CHFAHG ELR T
Sbjct: 34 SNKYKTNLCRHFKNGNCQLGSACHFAHGQEELRNT 68
>gi|403332620|gb|EJY65343.1| RING finger protein unkempt [Oxytricha trifallax]
Length = 296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT LC NF +G+C +GD+C FAHG EL+K
Sbjct: 185 FKTALCKNFEQGNCKYGDKCSFAHGDHELKK 215
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
+KT +C +F +G CT GD+C FAHG ELRK A
Sbjct: 106 YKTVMCRHFQTQGQCTLGDKCSFAHGEHELRKGA 139
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGA 140
N P K+ MC + C GDKC FAHGE EL K P+ +G+
Sbjct: 101 NDPAKYKTVMCRHFQTQGQCTLGDKCSFAHGEHELRKGAGGQVYQPKQYGS 151
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPP 153
K+ +C CK+GDKC FAHG+ EL K + S PG+ PPP
Sbjct: 184 TFKTALCKNFEQGN-CKYGDKCSFAHGDHELKKGGSPSG---------PGKF--NLNPPP 231
Query: 154 APGPAA 159
PG A
Sbjct: 232 VPGLAG 237
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 155 PGPAASFG--ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRN 211
PG + +G T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++
Sbjct: 260 PGGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKI 319
Query: 212 IELEGSFEQIKQASAMVRE 230
+ G+ ++I+QA M+ E
Sbjct: 320 FNVRGNRQEIEQAIRMISE 338
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 143 GRMGGRYEPPPAPGPAASFGASA---TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS 199
G MG + + G FG + ++++ LAGAIIGKGG ++I RQ+ A++
Sbjct: 446 GGMGQNFSQDNSGGMGQMFGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIV 505
Query: 200 IRDHEADPNLRNIELEGSFEQIKQASAMVR 229
I + N R I + G+ EQI+ A +++
Sbjct: 506 IDEGLPGSNDRIITITGTHEQIQSAQFLLQ 535
>gi|340503588|gb|EGR30146.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 318
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRKTA 289
+KT LC +F G+C G CHFAHG ELR T
Sbjct: 110 YKTSLCRHFKNGNCQLGQACHFAHGMEELRTTT 142
>gi|297813443|ref|XP_002874605.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320442|gb|EFH50864.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
S T I V S G +IGKGG + + +GAK+ I RD EADPN LR +E+ G+
Sbjct: 181 STTRTIDVPNSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPNSALRPVEIIGTVAC 240
Query: 221 IKQASAMVRELIVR 234
I+ A ++ +I
Sbjct: 241 IENAERLISAVIAE 254
>gi|224013434|ref|XP_002296381.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968733|gb|EED87077.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 848
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
VK+ +C NSA+GC FGDKC++AHGE EL
Sbjct: 253 VKTELCRYFNSAKGCIFGDKCNYAHGEQEL 282
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 254 SSNFKTKLCGNF--AKGSCTFGDRCHFAHGAAELR 286
S+ KT+LC F AKG C FGD+C++AHG EL+
Sbjct: 250 SAKVKTELCRYFNSAKG-CIFGDKCNYAHGEQELK 283
>gi|341876603|gb|EGT32538.1| hypothetical protein CAEBREN_08191 [Caenorhabditis brenneri]
Length = 482
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 196 AKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSS 255
+K++I DH D ++ L+ + G A+ + A + L S
Sbjct: 239 SKITIDDHNED---------------TMSAEKENHLLEQRGDKQARRGFASTEAENQLPS 283
Query: 256 NFKTKLCGNFAKGS--CTFGDRCHFAHGAAELRKTAI 290
N+KT+LC A G+ C G RC FAHG ELR T +
Sbjct: 284 NYKTRLCMMHASGTKPCEMGARCKFAHGLKELRSTDV 320
>gi|348510817|ref|XP_003442941.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 372
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Query: 235 IGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+GPA + GS++ SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 127 LGPA-----SPTGSSSQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 174
>gi|341876679|gb|EGT32614.1| hypothetical protein CAEBREN_26247 [Caenorhabditis brenneri]
Length = 464
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 196 AKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSS 255
+K++I DH D ++ L+ + G A+ + A + L S
Sbjct: 218 SKITIDDHNED---------------TMSAEKENHLLEQRGDKQARRGFASTEAENQLPS 262
Query: 256 NFKTKLCGNFAKGS--CTFGDRCHFAHGAAELRKTAI 290
N+KT+LC A G+ C G RC FAHG ELR T +
Sbjct: 263 NYKTRLCMMHASGTKPCEMGARCKFAHGLKELRSTDV 299
>gi|157863889|ref|XP_001687495.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68223706|emb|CAJ01935.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 364
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
++N+KT+LC FA+G C G++C+FAHG ELR
Sbjct: 206 NANYKTRLCKGFAEGHCNRGNQCNFAHGVGELR 238
>gi|403358770|gb|EJY79040.1| Far upstream element-binding protein [Oxytricha trifallax]
Length = 495
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 150 EPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN 208
E P PGP F S+ SL G IIGK G KQ+ + GA + I + H+ N
Sbjct: 339 EVNPFPGPHIPF--------SIPNSLTGLIIGKNGDTIKQLHNKCGAYIFIPKQHDHQTN 390
Query: 209 LRNIELEGSFEQIKQASAMVRELI 232
R +EL GS EQI++A ++ L+
Sbjct: 391 ERILELSGSEEQIERAKKEIQRLL 414
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 155 PGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN-LRNIE 213
P PAA I + G IIGKGG + + Q+GAK+ + E N +RN+
Sbjct: 244 PSPAAFI-------IPIPNDCVGLIIGKGGETIRNLQLQSGAKIQVAKKECQGNQIRNVF 296
Query: 214 LEGSFEQIKQASAMVRELI 232
+EG E+ A ++ E++
Sbjct: 297 VEGPQERYDLAKKLIDEIV 315
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 250 AHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
A P++ FK +C ++ K GSC FGD CHFAHG ELR
Sbjct: 166 AQPVNEFFKIAICKHWEKMGSCPFGDECHFAHGETELR 203
>gi|340500200|gb|EGR27096.1| zinc finger ccch type domain protein [Ichthyophthirius multifiliis]
Length = 181
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
KT+LC NF G+CT GD+CHFAH +EL++
Sbjct: 37 KTRLCQNFLNGTCTKGDKCHFAHSESELKQ 66
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT LC NF+KG C GD+C +AH EL+
Sbjct: 107 YKTSLCFNFSKGKCLNGDKCRYAHNEEELK 136
>gi|219130928|ref|XP_002185604.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217402944|gb|EEC42902.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 603
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+K LC +F +GSC F + CHFAHG +ELRK
Sbjct: 183 YKISLCKHFLQGSCPFAENCHFAHGESELRK 213
>gi|113931444|ref|NP_001039174.1| novel zinc finger C-x8-C-x5-C-x3-H type (and similar) protein
[Xenopus (Silurana) tropicalis]
gi|89268244|emb|CAJ83105.1| novel zinc finger C-x8-C-x5-C-x3-H type (and similar) protein
[Xenopus (Silurana) tropicalis]
Length = 297
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 248 SAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S PLSS +KT+LC F + GSC +G RCHF H A E R
Sbjct: 110 SPPKPLSSRYKTELCRTFHEIGSCKYGSRCHFIHNAEEQR 149
>gi|401429238|ref|XP_003879101.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495351|emb|CBZ30655.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 311
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 251 HPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
H L+ +KTKLC N+ AKG C + RC FAHG ELR +
Sbjct: 28 HILAGRYKTKLCKNYVAKGECPYDVRCMFAHGEDELRTS 66
>gi|307110415|gb|EFN58651.1| hypothetical protein CHLNCDRAFT_140910 [Chlorella variabilis]
Length = 713
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 229 RELIVRIGPAHAKNPATAGSAAHPLSS------NFKTKLCGNFAKGSCTFGDRCHFAHGA 282
R LIV+ A A PAT PL+ N+KT LC ++ GSC+ G+RC +AHG
Sbjct: 416 RVLIVQRPQAAASGPATP-----PLNYDQQPPPNYKTLLCRHYQAGSCSHGNRCTYAHGE 470
Query: 283 AELRK 287
ELR+
Sbjct: 471 HELRR 475
>gi|146100682|ref|XP_001468920.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398023059|ref|XP_003864691.1| hypothetical protein, conserved [Leishmania donovani]
gi|134073289|emb|CAM72013.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322502927|emb|CBZ38011.1| hypothetical protein, conserved [Leishmania donovani]
Length = 313
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 251 HPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
H L+ +KTKLC N+ AKG C + RC FAHG ELR +
Sbjct: 36 HILAGRYKTKLCKNYVAKGECPYDVRCMFAHGEDELRTS 74
>gi|427781319|gb|JAA56111.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 368
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 237 PAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
P A P + S+ SS +KT+LC F + G+C +GD+C FAHG ELR A
Sbjct: 134 PTCATTPTSPPSSVAQNSSRYKTELCRPFEESGTCKYGDKCQFAHGGHELRTLA 187
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 249 AAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
A HP +KT+LC F G C +G RCHF H + E RK +
Sbjct: 187 ARHP---KYKTELCRTFHTAGFCPYGPRCHFIHNSDESRKNLL 226
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+ +C + CK+GDKC FAHG EL
Sbjct: 155 KTELCRPFEESGTCKYGDKCQFAHGGHEL 183
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSFEQ 220
+ T KI V ++ G +IGK G + + +GAK+ I RD +ADP + R +EL G+ E
Sbjct: 184 TTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGTLES 243
Query: 221 IKQASAMVRELIVR 234
I +A ++ +I
Sbjct: 244 IDKAEKLMNAVIAE 257
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE----ADPNLRNI 212
PA + S +I V G IIGKGG K + +TGA++ + D R +
Sbjct: 273 PAQAIVGSDQIQIQVPNEKVGLIIGKGGETIKSLQTKTGARIQLIPQHLPEGDDSKERTV 332
Query: 213 ELEGSFEQIKQASAMVRELIVRIGP 237
++ G QI+ A M++E++ +I P
Sbjct: 333 QVTGDKRQIEIAQEMIKEVLSQIWP 357
>gi|344257955|gb|EGW14059.1| Far upstream element-binding protein 3 [Cricetulus griseus]
Length = 493
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +QI+ A
Sbjct: 283 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 342
Query: 227 MVRELI-VRIGP 237
++ E + VR GP
Sbjct: 343 LIDEKVGVRTGP 354
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 83 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 139
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 140 DPFKVQQAREMVLEII 155
>gi|384246837|gb|EIE20326.1| hypothetical protein COCSUDRAFT_54465 [Coccomyxa subellipsoidea
C-169]
Length = 208
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+ N KTKLC + G C FG+RC+FAHG ELRK
Sbjct: 31 AENAKTKLCMRWKNGHCRFGERCNFAHGEEELRK 64
>gi|356538917|ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
Length = 794
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSFEQIK 222
T KI V + G +IGK G + + +GAK+ I RD +ADP R++EL GS E I
Sbjct: 198 TRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGSLESID 257
Query: 223 QASAMVRELIVR 234
+A ++ +I
Sbjct: 258 KAEKLMNAVIAE 269
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSFEQIK 222
T KI V + G +IGK G + + +GAK+ I RD +ADP R++EL GS E I
Sbjct: 199 TRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGSLESID 258
Query: 223 QASAMVRELIVR 234
+A ++ +I
Sbjct: 259 KAEKLMNAVIAE 270
>gi|403417579|emb|CCM04279.1| predicted protein [Fibroporia radiculosa]
Length = 1974
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 98 RMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPG 156
++CN S C+FGD+C FAH +LG+P + RA P + R +P PAPG
Sbjct: 7 QVCNAFASVGRCRFGDRCKFAH---QLGQPAGSTSSPVRAQAPTPSQ---RPKPGPAPG 59
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 35/97 (36%), Gaps = 19/97 (19%)
Query: 37 CTKFFSTAGCPFGESCHFLHYF--PGGYNA--VAQMMNLPQAVPAPSRNMAVPPPASNGP 92
C F S C FG+ C F H P G + V P P P VPP
Sbjct: 9 CNAFASVGRCRFGDRCKFAHQLGQPAGSTSSPVRAQAPTPSQRPKPGPAPGVPP------ 62
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
R+CN ++ C G C F H KP+A
Sbjct: 63 -----RVCNLFWTSGSCARGFDCSFKHER----KPVA 90
>gi|3608145|gb|AAC36178.1| hypothetical protein [Arabidopsis thaliana]
gi|225898567|dbj|BAH30414.1| hypothetical protein [Arabidopsis thaliana]
Length = 180
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 33 KSKPCTKFFSTAGCPF-GESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRN-----MAVPP 86
K+K C KF CP+ SCHF H N + V SRN +++ P
Sbjct: 73 KTKLCFKF-RAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 131
Query: 87 PASNGPTV----VKSRMCNRLNSAEGCKFGDKCHFAHG 120
+ T+ K+R+CN+ + C FG CHFAHG
Sbjct: 132 RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHG 169
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSS-NFKTKLCGNF-AKGSCTFGDRC 276
E + +AS V +GP G+ A L S N+KT++C + G C FG C
Sbjct: 113 ETVTEASRNRESFAVSLGPR--------GNVAQTLKSPNWKTRICNKWQTTGYCPFGSHC 164
Query: 277 HFAHG 281
HFAHG
Sbjct: 165 HFAHG 169
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAKGSCTF-GDRCHFAHGAAELR 286
S FKTKLC F G+C + CHFAH A ELR
Sbjct: 70 SFFKTKLCFKFRAGTCPYSASSCHFAHSAEELR 102
>gi|389594553|ref|XP_003722499.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323363727|emb|CBZ12732.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 317
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 251 HPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKT 288
H L+ +KTKLC N+ A+G C + RC FAHG ELR +
Sbjct: 36 HILAGRYKTKLCKNYVARGECPYDVRCMFAHGEDELRTS 74
>gi|121483937|gb|ABM54277.1| FUBP3 [Pan paniscus]
Length = 280
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G +QI+ A
Sbjct: 68 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQ 127
Query: 227 MVRELI 232
++ E +
Sbjct: 128 LIDEKV 133
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 126 KPIAISHDDP--RAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKG 183
KP +S DD +A G + GR R EP A G S T ++ + S G+I+G G
Sbjct: 417 KPKYLSFDDELVQAAGQIHGREDYR-EPTSATGRFLS-----TIELRIPNSSLGSIVGAG 470
Query: 184 GVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GVN +I + +GA+L + + A + +E++G+ +Q K A ++++ I
Sbjct: 471 GVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFI 519
>gi|397575886|gb|EJK49944.1| hypothetical protein THAOC_31122 [Thalassiosira oceanica]
Length = 627
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+K LC +F G C FG+ CHFAHG AELR+
Sbjct: 184 YKVSLCKHFQNGECPFGEGCHFAHGEAELRR 214
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 40 FFSTAGCPFGESCHFLHYFPGGYNA--VAQM-MNLPQAVPAPSRNMAVPPPASNGPTVVK 96
F+S C G C + H + VA + L Q M + PA+ K
Sbjct: 126 FYSQGFCIHGPFCRYRHVQRDRADLPLVADFTLGLSQMQAGKDGGMTMRRPAAKPNEFYK 185
Query: 97 SRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+C + E C FG+ CHFAHGE EL +
Sbjct: 186 VSLCKHFQNGE-CPFGEGCHFAHGEAELRR 214
>gi|444732084|gb|ELW72403.1| Tristetraprolin [Tupaia chinensis]
Length = 377
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 231 LIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
L R GP + +P T+ +A SS +KT+LC F++ G C +G +C FAHG ELR+
Sbjct: 132 LAPRPGPELSPSP-TSPTATPATSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 188
>gi|294946096|ref|XP_002784926.1| hypothetical protein Pmar_PMAR022569 [Perkinsus marinus ATCC 50983]
gi|239898277|gb|EER16722.1| hypothetical protein Pmar_PMAR022569 [Perkinsus marinus ATCC 50983]
Length = 150
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 221 IKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAH 280
I+QA V L+ R+ + A P KTK C +FA+G C FGD+C FAH
Sbjct: 9 IEQADFEVLYLVGRLQRFEPQICFVNPEAPSPPVYLVKTKACRHFARGYCAFGDKCAFAH 68
Query: 281 GAAELR 286
ELR
Sbjct: 69 TVDELR 74
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADP--NLRNIELEGSFEQ 220
S T KI + G IIGK G K + Q+GAK+ + RD + P R++++ G+ +Q
Sbjct: 142 STTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQ 201
Query: 221 IKQASAMVRELIVR 234
I +A ++ +++
Sbjct: 202 ISRAEQLIIDVLAE 215
>gi|383857861|ref|XP_003704422.1| PREDICTED: uncharacterized protein LOC100877850 [Megachile
rotundata]
Length = 380
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 248 SAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SA+ P +S +KT+LC F + G+C +GD+C FAHG +ELR A
Sbjct: 83 SASEP-TSRYKTELCRPFEESGTCKYGDKCQFAHGYSELRNLA 124
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
AS + K+ +C + CK+GDKC FAHG EL
Sbjct: 84 ASEPTSRYKTELCRPFEESGTCKYGDKCQFAHGYSEL 120
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 25/104 (24%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
K + SE K++ C F + C +G+ C F H GY+ +
Sbjct: 79 KLDRSASEPTSRYKTELCRPFEESGTCKYGDKCQFAH----GYSEL-------------- 120
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
RN+A P K+ +C ++ C +G +CHF H E
Sbjct: 121 RNLARHP-------KYKTELCRTFHTIGFCPYGPRCHFIHNFEE 157
>gi|432892293|ref|XP_004075749.1| PREDICTED: uncharacterized protein LOC101175179 [Oryzias latipes]
Length = 412
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 186 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPAT 245
N K++ + +S+ + +D L FEQ++ + R + P P++
Sbjct: 81 NQKELSFRPDRSMSLTESSSD-------LFSFFEQLRTSELFPRGPSSTVAPPPGFAPSS 133
Query: 246 AGSA-AHPLSS--NFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
A P+ S +KT+LC F + GSC +G +C FAHG AELR
Sbjct: 134 NLQAQVQPMLSPNRYKTELCRGFQETGSCKYGSKCQFAHGEAELR 178
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 77 APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
APS N+ P K+ +C CK+G KC FAHGE EL
Sbjct: 130 APSSNLQAQVQPMLSPNRYKTELCRGFQETGSCKYGSKCQFAHGEAEL 177
>gi|431902890|gb|ELK09105.1| Heterogeneous nuclear ribonucleoprotein K [Pteropus alecto]
Length = 438
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 279 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 338
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPA--HAKNPATAGSAAHPLSS 255
+ I + R I + G+ +QI+ A +++ I +G KN +A +A LSS
Sbjct: 339 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSIYGMGLVLEWIKNSGSA-AAMEKLSS 397
>gi|110762396|ref|XP_001121248.1| PREDICTED: hypothetical protein LOC725393 [Apis mellifera]
Length = 401
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Query: 221 IKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFA 279
+++ +++V LI + H K SA+ P +S +KT+LC F + G+C +GD+C FA
Sbjct: 52 LRRYTSLVTTLIEQ----HRK---LDRSASEP-TSRYKTELCRPFEESGTCKYGDKCQFA 103
Query: 280 HGAAELRKTA 289
HG +ELR A
Sbjct: 104 HGYSELRNLA 113
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
AS + K+ +C + CK+GDKC FAHG EL
Sbjct: 73 ASEPTSRYKTELCRPFEESGTCKYGDKCQFAHGYSEL 109
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 25/104 (24%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
K + SE K++ C F + C +G+ C F H GY+ +
Sbjct: 68 KLDRSASEPTSRYKTELCRPFEESGTCKYGDKCQFAH----GYSEL-------------- 109
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
RN+A P K+ +C ++ C +G +CHF H E
Sbjct: 110 RNLARHP-------KYKTELCRTFHTIGFCPYGPRCHFIHNFEE 146
>gi|340723738|ref|XP_003400246.1| PREDICTED: hypothetical protein LOC100651220 [Bombus terrestris]
Length = 397
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 248 SAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SA+ P +S +KT+LC F + G+C +GD+C FAHG +ELR A
Sbjct: 73 SASEP-TSRYKTELCRPFEESGTCKYGDKCQFAHGYSELRNLA 114
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
AS + K+ +C + CK+GDKC FAHG EL
Sbjct: 74 ASEPTSRYKTELCRPFEESGTCKYGDKCQFAHGYSEL 110
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 25/104 (24%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
K + SE K++ C F + C +G+ C F H GY+ +
Sbjct: 69 KLDRSASEPTSRYKTELCRPFEESGTCKYGDKCQFAH----GYSEL-------------- 110
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
RN+A P K+ +C ++ C +G +CHF H E
Sbjct: 111 RNLARHP-------KYKTELCRTFHTIGFCPYGPRCHFIHNFEE 147
>gi|391330077|ref|XP_003739491.1| PREDICTED: uncharacterized protein LOC100902394 [Metaseiulus
occidentalis]
Length = 354
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS +KT+LC F + G C +G RC FAHGAAELR A
Sbjct: 90 SSRYKTELCRPFEENGMCKYGARCQFAHGAAELRTLA 126
>gi|307106127|gb|EFN54374.1| hypothetical protein CHLNCDRAFT_135669 [Chlorella variabilis]
Length = 388
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 254 SSN--FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
SSN FKT++C + GSC +GD+C +AHG ELR
Sbjct: 83 SSNVFFKTRICNKWRNGSCPYGDKCTYAHGEHELR 117
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+R+CN+ + C +GDKC +AHGE EL
Sbjct: 89 KTRICNKWRNGS-CPYGDKCTYAHGEHEL 116
>gi|5360265|dbj|BAA81905.1| HrZF-1 [Halocynthia roretzi]
Length = 621
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
+++PCT + + CP+GE C+F Y+ + + + P V SR
Sbjct: 466 RTEPCTTYHTIGMCPYGEQCNF-------YHDLKEKNDHPN-VTKTSR------------ 505
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+R+C A C +G KC FAHG +L
Sbjct: 506 --YKTRLCKTWQKAGECPYGVKCDFAHGTDDL 535
>gi|12654955|gb|AAH01325.1| Unknown (protein for IMAGE:3456579), partial [Homo sapiens]
Length = 372
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 108 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 167
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 168 QQIEVARQLIDEKV 181
>gi|167524835|ref|XP_001746753.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775023|gb|EDQ88649.1| predicted protein [Monosiga brevicollis MX1]
Length = 391
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 222 KQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSN-FKTKLCGNFAK-GSCTFGDRCHFA 279
+Q + V G + ++ + S+ P S+N FKT+LC +++ G+C +GD+C FA
Sbjct: 31 RQRTQSSSSTTVNHGNGNPRSRTHSSSSNAPTSNNRFKTELCRSWSNTGACRYGDKCQFA 90
Query: 280 HGAAELR 286
HG AELR
Sbjct: 91 HGEAELR 97
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 88 ASNGPTV---VKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+SN PT K+ +C ++ C++GDKC FAHGE EL
Sbjct: 57 SSNAPTSNNRFKTELCRSWSNTGACRYGDKCQFAHGEAEL 96
>gi|350422621|ref|XP_003493231.1| PREDICTED: hypothetical protein LOC100743445 [Bombus impatiens]
Length = 351
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 248 SAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SA+ P +S +KT+LC F + G+C +GD+C FAHG +ELR A
Sbjct: 73 SASEP-TSRYKTELCRPFEESGTCKYGDKCQFAHGYSELRNLA 114
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
AS + K+ +C + CK+GDKC FAHG EL
Sbjct: 74 ASEPTSRYKTELCRPFEESGTCKYGDKCQFAHGYSEL 110
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 25/104 (24%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
K + SE K++ C F + C +G+ C F H GY+ +
Sbjct: 69 KLDRSASEPTSRYKTELCRPFEESGTCKYGDKCQFAH----GYSEL-------------- 110
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
RN+A P K+ +C ++ C +G +CHF H E
Sbjct: 111 RNLARHP-------KYKTELCRTFHTIGFCPYGPRCHFIHNFEE 147
>gi|403340266|gb|EJY69410.1| Zinc finger protein [Oxytricha trifallax]
Length = 649
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 253 LSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
++S FK LC F + GSC FG++C +AHGA ELR+
Sbjct: 1 MNSKFKISLCKLFEQTGSCNFGNKCSYAHGAHELRR 36
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 143 GRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
GR G P+ P S T + V S A A+IG GVN + R +GA ++I +
Sbjct: 286 GRETGAGVSSPSLTPQQSIVNKITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEE 345
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELI 232
+ P +E+ GS Q++ A +++ +
Sbjct: 346 TKGVPGEMTVEINGSVSQVQTAQQLIQNFM 375
>gi|414870925|tpg|DAA49482.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 170
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 136 RAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTG 195
+A G + GR R EP A G S T ++ + S G+I+G GGVN +I + +G
Sbjct: 58 QAAGQIHGREDYR-EPTSATGRFLS-----TIELRIPNSSLGSIVGAGGVNLAEIRQVSG 111
Query: 196 AKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
A+L + + A + +E++G+ +Q K A ++++ I
Sbjct: 112 ARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFI 148
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S G + V G +IG+GG QI QT ++ + N+R L+G
Sbjct: 25 PVGSVGEVVMETMEVPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQG 84
Query: 217 SFEQIKQASAMVRELIVRIG 236
S + +A AM+ E+I R G
Sbjct: 85 SKMSVDRARAMINEVIARAG 104
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQ 220
G + ++ V + G IIGKGG K++ ++GAK+ + D + R ++G+ EQ
Sbjct: 218 GQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQ 277
Query: 221 IKQASAMVRELIVRIGPA 238
I +A+ + EL+ + G A
Sbjct: 278 IAKATQFISELVKKSGAA 295
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 130 ISHDDPRA-FGAVPGRMGGRYEPPP------APGPAASFGASATAKISVDASLAGAIIGK 182
+S D RA V R G R PPP G G T ++ + + G +IGK
Sbjct: 87 MSVDRARAMINEVIARAGNR--PPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGK 144
Query: 183 GGVNSKQICRQTGAKLSI--RDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GG K I QTG K+ + + E+ + + + G E+++ A MV E++
Sbjct: 145 GGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEEIL 196
>gi|159491480|ref|XP_001703693.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158270542|gb|EDO96384.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 177
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+ N KTK+C + +G C FG RC+FAHG ELRK
Sbjct: 34 AENAKTKVCTRWLQGDCRFGARCNFAHGEHELRK 67
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S G + V G +IG+GG QI QT ++ + N+R L+G
Sbjct: 78 PVGSVGEVVMETMEVPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQG 137
Query: 217 SFEQIKQASAMVRELIVRIG 236
S + +A AM+ E+I R G
Sbjct: 138 SKMSVDRARAMINEVIARAG 157
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 126 KPIAISHDDPRAFGA---VPGRMGGRYEPPPAP-GPAASFG----ASATAKISVDASLAG 177
KP+ I+ D + A V + R + PP G SFG + ++ V + G
Sbjct: 227 KPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGIGGGQRSIGEVIVPRASVG 286
Query: 178 AIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
IIGKGG K++ ++GAK+ + D + R ++G+ EQI +A+ + EL+ + G
Sbjct: 287 MIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELVKKSG 346
Query: 237 PA 238
A
Sbjct: 347 AA 348
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 130 ISHDDPRA-FGAVPGRMGGRYEPPPAP------GPAASFGASATAKISVDASLAGAIIGK 182
+S D RA V R G R PPP G G T ++ + + G +IGK
Sbjct: 140 MSVDRARAMINEVIARAGNR--PPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGK 197
Query: 183 GGVNSKQICRQTGAKLSI--RDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GG K I QTG K+ + + E+ + + + G E+++ A MV E++
Sbjct: 198 GGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEEIL 249
>gi|405124187|gb|AFR98949.1| hypothetical protein CNAG_05523 [Cryptococcus neoformans var.
grubii H99]
Length = 951
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
+++PC KFF+ CP GE C FLH P + + A P SN P
Sbjct: 755 RTRPC-KFFAEGHCPHGEECTFLHIIPASSPELLSSSDSDSANHKPKGQ-------SNKP 806
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+ C NS GC GD C F H
Sbjct: 807 ---KTLPCKFFNSTAGCINGDDCAFLHA 831
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 23/87 (26%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+ PC F STAGC G+ C FLH A++ +P++VP +R P
Sbjct: 807 KTLPCKFFNSTAGCINGDDCAFLH---------ARV--VPESVPLVAR-----------P 844
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+++ C C GD CHFAH
Sbjct: 845 RPWRTKPCRHYQLGR-CLLGDACHFAH 870
>gi|224074291|ref|XP_002304341.1| predicted protein [Populus trichocarpa]
gi|222841773|gb|EEE79320.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 25/123 (20%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVP 85
+E+ K + C KF++ GCP+G++C FL + N + ++L
Sbjct: 159 AETQRSYKGRHCKKFYTEEGCPYGDNCTFL-HDEQSKNRESVAISLGPGGYGGGSGAGAG 217
Query: 86 PPA--------------------SNG----PTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
SN P+ K+R+CN+ C FG+KCHFAHG
Sbjct: 218 AGVGVGVGVGGGGGGEGGGGNAGSNAVNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGV 277
Query: 122 WEL 124
EL
Sbjct: 278 GEL 280
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHG EL +
Sbjct: 249 SNWKTRICNKWELTGYCPFGNKCHFAHGVGELHR 282
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 93 FKTKLCCKFRAGTCPYITNCNFAHSIEELRR 123
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF-------PGGYNAVAQMMNLPQAVPAPSRNMAVP 85
K+K C KF CP+ +C+F H P + VA +P
Sbjct: 94 KTKLCCKF-RAGTCPYITNCNFAHSIEELRRPPPNWQDIVAAHEEEKGNTVDVREEFQIP 152
Query: 86 PPASNGPTVVKS---RMCNRLNSAEGCKFGDKCHFAHGE 121
G +S R C + + EGC +GD C F H E
Sbjct: 153 SIVGFGAETQRSYKGRHCKKFYTEEGCPYGDNCTFLHDE 191
>gi|72388920|ref|XP_844755.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176072|gb|AAX70193.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801289|gb|AAZ11196.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 364
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAA--------HPLSSNFKTKLCGNFAK-GSC 270
Q+ + S + EL IG + +P+ SA + L+ +KTKLC NF + G+C
Sbjct: 21 QLSRHSTSLEELYT-IGYNRSHSPSCFSSAGCEEEEGQKNVLAERYKTKLCKNFVQYGTC 79
Query: 271 TFGDRCHFAHGAAELR 286
+ RC FAHG ELR
Sbjct: 80 PYDIRCMFAHGEEELR 95
>gi|432937814|ref|XP_004082483.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like, partial
[Oryzias latipes]
Length = 411
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 230 ELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
E ++ PA +P GS + SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 182 ERLINKCPA---SPTCGGSQVN--SSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 234
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 131 SHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQI 190
++D A G + GR R P ++ G +T ++ + S G+I+G GGVN +I
Sbjct: 653 AYDYTEAAGQIHGREDYR-------EPTSATGFLSTIELRIPNSSLGSIVGAGGVNLAEI 705
Query: 191 CRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
+ +GA+L + + A + +E++G+ +Q K A ++++ I
Sbjct: 706 RQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFI 747
>gi|261328003|emb|CBH10980.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 363
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAA--------HPLSSNFKTKLCGNFAK-GSC 270
Q+ + S + EL IG + +P+ SA + L+ +KTKLC NF + G+C
Sbjct: 21 QLSRHSTSLEELYT-IGYNRSHSPSCFSSAGCEEEEGQKNVLAERYKTKLCKNFVQYGTC 79
Query: 271 TFGDRCHFAHGAAELR 286
+ RC FAHG ELR
Sbjct: 80 PYDIRCMFAHGEEELR 95
>gi|403371038|gb|EJY85395.1| Zinc finger protein, putative [Oxytricha trifallax]
Length = 431
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 244 ATAGSAAHPLSSNFKTKLCGNFAKG-SCTFGDRCHFAHGAAELRK 287
++AG+ + FKT LC N+ G C G RCHFAHG ELRK
Sbjct: 7 SSAGAMFPSYNLKFKTNLCKNYISGLGCQRGQRCHFAHGDNELRK 51
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 11/98 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV---PPPAS 89
K+ C + S GC G+ CHF H G + LP +N + P
Sbjct: 21 KTNLCKNYISGLGCQRGQRCHFAH---GDNELRKEEECLPGQYVDEVKNQQLNYYTIPYC 77
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
N TV C +LN CKF C FAHG+ EL P
Sbjct: 78 NYKTV----RC-KLNDQGFCKFAQNCRFAHGDPELRNP 110
>gi|345497755|ref|XP_001599033.2| PREDICTED: hypothetical protein LOC100113609 [Nasonia vitripennis]
Length = 386
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC F + GSC +GD+C FAHG ELR A
Sbjct: 76 TSRYKTELCRPFEESGSCKYGDKCQFAHGYNELRNLA 112
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 63/183 (34%), Gaps = 35/183 (19%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
K + SE K++ C F + C +G+ C F H GYN +
Sbjct: 67 KLDRTVSEPTSRYKTELCRPFEESGSCKYGDKCQFAH----GYNEL-------------- 108
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG-EWELGKPIAISHDDPRAF 138
RN+A P K+ +C + C +G +CHF H E + +S
Sbjct: 109 RNLARHPK-------YKTELCRTFHKIGFCPYGPRCHFVHNFEEARIHNLKVSAQLHEQQ 161
Query: 139 GAVPGRMGG-------RYEPPPAPGPAA--SFGASATAKISVDASLAGAIIGKGGVNSKQ 189
P PG A S S +++ + L+ A+I NS Q
Sbjct: 162 QHNLHHQQQQNPTNIVNLSPLLQPGTTAALSVNVSLLEQLTNTSQLSAAVIATSANNSNQ 221
Query: 190 ICR 192
+ R
Sbjct: 222 LVR 224
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 249 AAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
A HP +KT+LC F K G C +G RCHF H E R
Sbjct: 112 ARHP---KYKTELCRTFHKIGFCPYGPRCHFVHNFEEAR 147
>gi|403376801|gb|EJY88386.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 691
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 68 MMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK- 126
+ N +++ APS A+ P A K C CK+GDKC FAHGE EL +
Sbjct: 354 VTNTSESLNAPSTQAAINPNARK-----KYETCKNFKEKGFCKYGDKCLFAHGEHELSRR 408
Query: 127 -PIAISHDDPRAFGAVPGRMGGRYEPPPAPGP 157
PI I + + + ++ + E P P
Sbjct: 409 QPIVIQTQEAKVEEEI--KIESKSETLPVEIP 438
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 199 SIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFK 258
+++D +D N+++ +L F Q +++ + + + N + +A +P ++ K
Sbjct: 320 TVKDVHSDINIQSSKLAVQFV-TNQQTSIQQTFNPVTNTSESLNAPSTQAAINP-NARKK 377
Query: 259 TKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
+ C NF KG C +GD+C FAHG EL +
Sbjct: 378 YETCKNFKEKGFCKYGDKCLFAHGEHELSR 407
>gi|292623933|ref|XP_002665468.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Danio
rerio]
Length = 361
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 246 AGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+ S++ P+S+ +KT+LC F + G+C +G +C FAHG ELR
Sbjct: 132 STSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELR 173
>gi|401418097|ref|XP_003873540.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489771|emb|CBZ25031.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 832
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ MC S EGC FG+KC FAHGE EL
Sbjct: 12 PSKYKTSMCTFFRSEEGCPFGEKCAFAHGEDEL 44
>gi|145525960|ref|XP_001448791.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416357|emb|CAK81394.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT +C +F G+C+ GD+C FAHG ELR
Sbjct: 17 YKTSICRHFELGNCSIGDKCQFAHGQKELR 46
>gi|146081802|ref|XP_001464354.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068446|emb|CAM66736.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 843
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ MC S EGC FG+KC FAHGE EL
Sbjct: 12 PSKYKTSMCTFFRSEEGCPFGEKCAFAHGEDEL 44
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 391 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGIP 450
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 451 QQIEVARQLIDEKV 464
>gi|390368521|ref|XP_003731465.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 195
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T ++++ AGAIIG G +QI Q+ A + I D + D N R I + G+ EQI A
Sbjct: 121 TTQVTIPKDCAGAIIGARGCRIRQIRTQSRATIKIEDSKPDSNERIISITGTDEQIGYAQ 180
Query: 226 AMVRELI 232
+++E +
Sbjct: 181 YLLQESV 187
>gi|452820893|gb|EME27930.1| zinc finger (CCCH-type) family protein [Galdieria sulphuraria]
Length = 742
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 252 PLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
P ++FKTK+C F+ G C GD+C FAH ELR
Sbjct: 440 PWMTHFKTKMCKFFSAGECKNGDKCSFAHSVEELR 474
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 252 PLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
P + +KT++C + G C G +C FAH A ELR+
Sbjct: 307 PWMTRWKTRMCKFYPMGMCKNGSKCSFAHSAEELRE 342
>gi|441623750|ref|XP_004088935.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Nomascus leucogenys]
Length = 847
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 457 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 516
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 517 QQIEVARQLIDEKV 530
>gi|110349919|emb|CAJ19273.1| putative RNA binding protein [Solanum commersonii]
Length = 184
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S + T I + S A A+IG G N I R +GA +++++ P +E+ G
Sbjct: 108 PQQSIVSKVTQNIQIPLSYADAVIGASGSNISYIRRASGATIAVQETRGVPGEMTVEING 167
Query: 217 SFEQIKQASAMVRE 230
S Q++ A +V++
Sbjct: 168 SASQVQTAQQLVQD 181
>gi|71006260|ref|XP_757796.1| hypothetical protein UM01649.1 [Ustilago maydis 521]
gi|46097197|gb|EAK82430.1| hypothetical protein UM01649.1 [Ustilago maydis 521]
Length = 409
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKT 288
+KT++C N+ KG C +GDRC FAHG ELR+
Sbjct: 312 YKTEICRNWEEKGFCYYGDRCQFAHGEHELRQV 344
>gi|157866750|ref|XP_001681930.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125381|emb|CAJ03240.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 835
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ MC S EGC FG+KC FAHGE EL
Sbjct: 12 PSKYKTSMCTFFRSEEGCPFGEKCAFAHGEDEL 44
>gi|403355299|gb|EJY77222.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 343
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 252 PLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAEL 285
P +KT+LC N+ +GSC FGD+C FAHG +L
Sbjct: 32 PFLHKYKTELCKNWENQGSCIFGDQCSFAHGLQQL 66
>gi|398012696|ref|XP_003859541.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497757|emb|CBZ32833.1| hypothetical protein, conserved [Leishmania donovani]
Length = 839
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ MC S EGC FG+KC FAHGE EL
Sbjct: 12 PSKYKTSMCTFFRSEEGCPFGEKCAFAHGEDEL 44
>gi|443916613|gb|ELU37617.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 179
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 4 RKRTKPETGINANGVFKKSK-HESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGY 62
R R P + I GV K+SK E E+ V K C +F+S+ C +G+ C FLH P
Sbjct: 34 RPRFPPGSRIMGIGVPKRSKLSEGEAEVEMKRTVC-RFYSSGMCEYGKDCRFLHVVPEPA 92
Query: 63 NAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGE 121
+ V QA P + S +C + GC +GD+C F H E
Sbjct: 93 DQV-------QASPKST-----------------STLC---RNYPGCAYGDRCDFKHVE 124
>gi|89272465|emb|CAJ82621.1| fubp1 [Xenopus (Silurana) tropicalis]
Length = 653
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + GS +QI A +V E I
Sbjct: 376 TGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 173 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---IAGDP 229
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 230 YKVQQAKEMVLELI 243
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 250 AHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
P++ +K +C ++ K GSC FGD CHFAHG ELR
Sbjct: 165 TQPVNEFYKIAICKHWEKLGSCPFGDECHFAHGDQELR 202
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQAS 225
I+V + G +IGK G + + +GAK+ I +D EAD N R++EL G+ E I +A
Sbjct: 156 INVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAE 215
Query: 226 AMVRELIVR 234
+++ +I
Sbjct: 216 RLIKNVIAE 224
>gi|229595569|ref|XP_001016748.3| hypothetical protein TTHERM_00191720 [Tetrahymena thermophila]
gi|225565829|gb|EAR96503.3| hypothetical protein TTHERM_00191720 [Tetrahymena thermophila
SB210]
Length = 396
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT++C F KGSC GD+CH+AHG E+R+
Sbjct: 225 YKTQICQQFTQKGSCQNGDKCHYAHGEQEIRQ 256
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 28/95 (29%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+K C + F T C G+SC F H G + ++
Sbjct: 191 KTKLC-QLFKTTRCNKGDSCDFAH----GTEELKSYVDR--------------------- 224
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
K+++C + C+ GDKCH+AHGE E+ +P
Sbjct: 225 --YKTQICQQFTQKGSCQNGDKCHYAHGEQEIRQP 257
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
P R+M P + K++MC + + + CK GDKC +AH + EL +P
Sbjct: 137 PRRDMRGPKNEVSVTAFHKTKMCPTVEAGQQCKKGDKCGYAHTQVELREP 186
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 152 PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN-- 208
P S+G+S KI + G +IGKGG K + Q+GAK+ + RD +ADPN
Sbjct: 75 PQYSQQGGSYGSSK--KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQ 132
Query: 209 LRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAG 247
R +EL G+ + + A ++ E++ A A+ A+ G
Sbjct: 133 TRMVELMGTPDAVSSAEKLINEVL-----AEAEAGASGG 166
>gi|196012987|ref|XP_002116355.1| hypothetical protein TRIADDRAFT_30852 [Trichoplax adhaerens]
gi|190580946|gb|EDV21025.1| hypothetical protein TRIADDRAFT_30852 [Trichoplax adhaerens]
Length = 97
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
AT ++S+ LAG+IIGKGG + + ++GA + I D + R I + G +QI +A
Sbjct: 22 ATVQVSIPKDLAGSIIGKGGTRIRDVRERSGAMIKIDDARPGEDYRVITISGGKDQIDEA 81
Query: 225 SAMVRELI 232
++++ +
Sbjct: 82 HGLLQDCV 89
>gi|45361433|ref|NP_989293.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|39794540|gb|AAH63902.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 653
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + GS +QI A +V E I
Sbjct: 376 TGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 173 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---IAGDP 229
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 230 YKVQQAKEMVLELI 243
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
A T +I V S AIIGKGG KQ+ TG+K+ I E N R I + GSFE I+
Sbjct: 108 AKYTCRIVVPKSAVSAIIGKGGQQIKQLQDSTGSKIQISSREDGLNERIITIIGSFESIR 167
Query: 223 QASAMV 228
+ V
Sbjct: 168 DTALKV 173
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 130 ISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQ 189
+ H P+ GA M G+ PGP GAS T +I + + GAIIGKGG +
Sbjct: 382 VGHAGPQVHGAPHQPMHGQM-----PGPG---GASLTQQIYIPNDMVGAIIGKGGQKINE 433
Query: 190 ICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 237
I + +G+ + I + + + N R + + G+ E + A M L R+GP
Sbjct: 434 IRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYM---LYSRLGP 478
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V G IIGKGG K I +Q+GA++ ++ + ADPN++ + GS +QI A
Sbjct: 366 TVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYARQ 425
Query: 227 MVRELI 232
+V E I
Sbjct: 426 LVEEKI 431
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSFEQIK 222
+I V AS AG +IGKGG K + + G K+ + ++ AD LR + G +++
Sbjct: 176 EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLR---ISGEPFKVQ 232
Query: 223 QASAMVRELI 232
QA MV ELI
Sbjct: 233 QAKEMVMELI 242
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G +QI+ A
Sbjct: 476 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQ 535
Query: 227 MVRELI 232
++ E +
Sbjct: 536 LIDEKV 541
>gi|357624170|gb|EHJ75049.1| hypothetical protein KGM_19145 [Danaus plexippus]
Length = 265
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 252 PLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
P +S +KT+LC F + G C +GD+C FAHG ELR
Sbjct: 102 PATSRYKTELCRPFEEAGVCKYGDKCQFAHGVRELR 137
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 83 AVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
A PPPA++ K+ +C A CK+GDKC FAHG EL
Sbjct: 98 APPPPATSR---YKTELCRPFEEAGVCKYGDKCQFAHGVREL 136
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
+KT+LC F + G C +G RCHF H A E R+
Sbjct: 145 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 176
>gi|294938800|ref|XP_002782205.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239893703|gb|EER14000.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 354
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT LC + KG C GD+C FAHG EL++
Sbjct: 148 FKTVLCSWWQKGKCDMGDKCRFAHGEEELQR 178
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAE------LRKTAI 290
+TKLC +F +G C +GD+C +AH ++ LRKT +
Sbjct: 77 LRTKLCKHFLRGCCLYGDKCTYAHDYSQIQVRPDLRKTRM 116
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPG 143
P + K+ +C+ + C GDKC FAHGE EL +P A S P PG
Sbjct: 145 PGLFKTVLCSWWQKGK-CDMGDKCRFAHGEEELQRPSAPS--GPENISITPG 193
>gi|147898765|ref|NP_001090218.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|47718038|gb|AAH70981.1| MGC78835 protein [Xenopus laevis]
gi|213626654|gb|AAI69815.1| Hypothetical protein MGC78835 [Xenopus laevis]
Length = 653
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + GS +QI A +V E I
Sbjct: 376 TGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 173 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---IAGDP 229
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 230 YKVQQAKEMVLELI 243
>gi|31559107|gb|AAP50256.1| FIP1-like protein [Trypanosoma cruzi]
Length = 280
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 250 AHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A P + KTKLC FA G C GD+C +AHG ELR
Sbjct: 173 AAPRDNFLKTKLCQRFALGRCVKGDQCSYAHGHGELR 209
>gi|47199556|emb|CAF88681.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 121 SSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 154
>gi|392886351|ref|NP_001250706.1| Protein GLA-3, isoform c [Caenorhabditis elegans]
gi|222350623|emb|CAX32484.1| Protein GLA-3, isoform c [Caenorhabditis elegans]
Length = 644
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 221 IKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFA 279
+ +++ +E+ V I P A +T G+ P KTK+C ++ + GSC++GD C +A
Sbjct: 1 MSSSASKTQEISVVIDPRDALTNSTNGNK--PNGPKPKTKICDHWRRSGSCSYGDACWYA 58
Query: 280 HGAAELRKTA 289
HG +LRK
Sbjct: 59 HGEDDLRKVV 68
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAI 130
NGP K+++C+ + C +GD C +AHGE +L K + I
Sbjct: 31 NGPKP-KTKICDHWRRSGSCSYGDACWYAHGEDDLRKVVRI 70
>gi|410897635|ref|XP_003962304.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 370
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 235 IGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+GPA + G + SS +KT+LC F + GSC +GD+C FAHG ELR +
Sbjct: 127 LGPA-----SPTGGSGQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELRSLS 177
>gi|71423473|ref|XP_812475.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877258|gb|EAN90624.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 287
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 250 AHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A P + KTKLC FA G C GD+C +AHG ELR
Sbjct: 173 AAPRDNFLKTKLCQRFALGRCVKGDQCSYAHGHGELR 209
>gi|391331981|ref|XP_003740417.1| PREDICTED: uncharacterized protein LOC100906487 [Metaseiulus
occidentalis]
Length = 485
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS +KT+LC F + G C +GD+C FAHG ELR A
Sbjct: 170 SSRYKTELCRPFEENGICKYGDKCQFAHGIEELRSLA 206
>gi|118404606|ref|NP_001072758.1| ZFP36 ring finger protein-like 1 [Xenopus (Silurana) tropicalis]
gi|116487406|gb|AAI25787.1| hypothetical protein MGC147385 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 113 SSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 146
>gi|15912259|gb|AAL08263.1| At1g32359/F27G20.10 [Arabidopsis thaliana]
gi|19547999|gb|AAL87363.1| At1g32359/F27G20.10 [Arabidopsis thaliana]
Length = 384
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL +
Sbjct: 259 SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLH 56
+ESG K + C KF++ GCP+GESC FLH
Sbjct: 167 AESGRSFKGRHCKKFYTEEGCPYGESCTFLH 197
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 92 FKTKLCCKFRAGTCPYITNCNFAHTVEELRR 122
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+R+CN+ C FG KCHFAHG EL
Sbjct: 258 PSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290
>gi|18398397|ref|NP_564396.1| zinc finger CCCH domain-containing protein 12 [Arabidopsis
thaliana]
gi|75264181|sp|Q9LQM3.1|C3H12_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 12;
Short=AtC3H12
gi|8920610|gb|AAF81332.1|AC007767_12 Contains similarity to an unknown protein At2g35430 gi|3608145 from
Arabidopsis thaliana BAC T32F12 gb|AC005314. It contains
a zinc finger C-x8-C-x5-C-x3-H type domain PF|00642.
ESTs gb|AV557765 and gb|AV544407 come from this gene
[Arabidopsis thaliana]
gi|12597862|gb|AAG60171.1|AC084110_4 unknown protein [Arabidopsis thaliana]
gi|26451083|dbj|BAC42646.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
gi|332193347|gb|AEE31468.1| zinc finger CCCH domain-containing protein 12 [Arabidopsis
thaliana]
Length = 384
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG +CHFAHGAAEL +
Sbjct: 259 SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLH 56
+ESG K + C KF++ GCP+GESC FLH
Sbjct: 167 AESGRSFKGRHCKKFYTEEGCPYGESCTFLH 197
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 92 FKTKLCCKFRAGTCPYITNCNFAHTVEELRR 122
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+R+CN+ C FG KCHFAHG EL
Sbjct: 258 PSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290
>gi|71418416|ref|XP_810843.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875439|gb|EAN88992.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 287
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 250 AHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A P + KTKLC FA G C GD+C +AHG ELR
Sbjct: 173 AAPRDNFLKTKLCQRFALGRCVKGDQCSYAHGHGELR 209
>gi|2353340|gb|AAB69448.1| Tis11 family protein [Crassostrea virginica]
Length = 401
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G C +GD+C FAHGA ELR
Sbjct: 113 SSRYKTELCRPFEESGHCKYGDKCQFAHGAHELR 146
>gi|162287133|ref|NP_001089645.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|71681229|gb|AAI00163.1| MGC114600 protein [Xenopus laevis]
Length = 345
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 113 SSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 146
>gi|67606553|ref|XP_666758.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657808|gb|EAL36525.1| hypothetical protein Chro.70136 [Cryptosporidium hominis]
Length = 577
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KTKLC F+KG+C GD C FAHG+ +LR
Sbjct: 81 WKTKLCLMFSKGACKNGDNCRFAHGSEDLR 110
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
KTKLC + +C+ G+ C FAHG ELR T
Sbjct: 117 KTKLCPFWLSSACSIGENCPFAHGTTELRVT 147
>gi|66362664|ref|XP_628298.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
gi|46229863|gb|EAK90681.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
Length = 591
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KTKLC F+KG+C GD C FAHG+ +LR
Sbjct: 93 WKTKLCLMFSKGACKNGDNCRFAHGSEDLR 122
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
KTKLC + +C+ G+ C FAHG ELR T
Sbjct: 129 KTKLCPFWLSSACSIGENCPFAHGTTELRVT 159
>gi|407835256|gb|EKF99208.1| hypothetical protein TCSYLVIO_009879 [Trypanosoma cruzi]
Length = 279
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 250 AHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
A P + KTKLC FA G C GD+C +AHG ELR
Sbjct: 173 AAPRDNFLKTKLCQRFALGRCVKGDQCSYAHGHGELR 209
>gi|294878940|ref|XP_002768519.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871084|gb|EER01237.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 408
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT LC + KG C GD+C FAHG EL++
Sbjct: 177 FKTVLCSWWQKGKCDMGDKCRFAHGEQELQR 207
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAE------LRKTAI 290
+TKLC +F +G C +GD+C +AH ++ LRKT +
Sbjct: 106 LRTKLCKHFLRGCCLYGDKCTYAHDYSQIQVRPDLRKTKM 145
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPG 143
P + K+ +C+ + C GDKC FAHGE EL +P A S P PG
Sbjct: 174 PGLFKTVLCSWWQKGK-CDMGDKCRFAHGEQELQRPSAPS--GPENISITPG 222
>gi|323509553|dbj|BAJ77669.1| cgd7_1120 [Cryptosporidium parvum]
Length = 579
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KTKLC F+KG+C GD C FAHG+ +LR
Sbjct: 81 WKTKLCLMFSKGACKNGDNCRFAHGSEDLR 110
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
KTKLC + +C+ G+ C FAHG ELR T
Sbjct: 117 KTKLCPFWLSSACSIGENCPFAHGTTELRVT 147
>gi|405960411|gb|EKC26337.1| Butyrate response factor 1 [Crassostrea gigas]
Length = 396
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G C +GD+C FAHGA ELR
Sbjct: 111 SSRYKTELCRPFEESGHCKYGDKCQFAHGAHELR 144
>gi|261328101|emb|CBH11078.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 566
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT LC F + G C FGDRC FAHG ELR
Sbjct: 12 ASKYKTSLCTYFMENGECQFGDRCAFAHGEDELR 45
>gi|219887089|gb|ACL53919.1| unknown [Zea mays]
gi|414868823|tpg|DAA47380.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 217
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 147 GRYEPPPAPGPAASFGASATAKIS----VDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
GR PP AP P A +++++ V S A A+IG G + I R +GA +SI+
Sbjct: 70 GRDAPPSAP-PGNQNQAHGSSQVTHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQ- 127
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
E P +E+ GS Q++ A +++ + P + P G P+ + +
Sbjct: 128 -EGAPGEMTVEITGSASQVQTAQQLIKNFMAEASP---QGPPAPGPHGQPVDTGY 178
>gi|72389074|ref|XP_844832.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176319|gb|AAX70431.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801366|gb|AAZ11273.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 566
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT LC F + G C FGDRC FAHG ELR
Sbjct: 12 ASKYKTSLCTYFMENGECQFGDRCAFAHGEDELR 45
>gi|414870924|tpg|DAA49481.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 169
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 136 RAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTG 195
+A G + GR R EP A G + T ++ + S G+I+G GGVN +I + +G
Sbjct: 58 QAAGQIHGREDYR-EPTSATGFLS------TIELRIPNSSLGSIVGAGGVNLAEIRQVSG 110
Query: 196 AKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
A+L + + A + +E++G+ +Q K A ++++ I
Sbjct: 111 ARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFI 147
>gi|395526014|ref|XP_003765170.1| PREDICTED: tristetraprolin [Sarcophilus harrisii]
Length = 291
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 233 VRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
VR+ A A +P + ++ SS +KT+LC F++ G C +G +C F HG ELR
Sbjct: 22 VRVTEALAPSPTLSLTSFPASSSRYKTELCRTFSESGKCRYGSKCQFTHGLEELR 76
>gi|387219107|gb|AFJ69262.1| hypothetical protein NGATSA_3006800, partial [Nannochloropsis
gaditana CCMP526]
Length = 317
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 254 SSNFKTKLCGNFA--KGSCTFGDRCHFAHGAAELRK 287
+ N+KT LC ++ KG C FGD C FAHG ELRK
Sbjct: 19 NENYKTTLCNHWLSNKGLCPFGDDCVFAHGETELRK 54
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 96 KSRMCNRLNSAEG-CKFGDKCHFAHGEWELGK-PIAISHDDPRAFGAVPGR 144
K+ +CN S +G C FGD C FAHGE EL K P+AI+ + +A A GR
Sbjct: 23 KTTLCNHWLSNKGLCPFGDDCVFAHGETELRKHPLAIAREQQQAHRAGGGR 73
>gi|148234376|ref|NP_001084214.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|4580022|gb|AAD24208.1|AF061981_1 CCCH zinc finger protein C3H-2 [Xenopus laevis]
gi|54038156|gb|AAH84197.1| C3H-2 protein [Xenopus laevis]
Length = 345
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + GSC +GD+C FAHG ELR
Sbjct: 113 SSRYKTELCRPFEENGSCKYGDKCQFAHGIHELR 146
>gi|32398717|emb|CAD98677.1| hypothetical predicted zinc-finger protein, unknown function
[Cryptosporidium parvum]
Length = 330
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 238 AHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
AH++ A S FKT LC + KGSC GD C +AHG ELR
Sbjct: 62 AHSRKELRATSDL------FKTSLCVYWIKGSCVVGDSCRYAHGIEELR 104
>gi|148229383|ref|NP_001090529.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xenopus laevis]
Length = 610
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + GS +QI A +V E I
Sbjct: 376 TGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 173 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---IAGDP 229
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 230 YKVQQAKEMVLELI 243
>gi|146161669|ref|XP_001007604.2| hypothetical protein TTHERM_00058710 [Tetrahymena thermophila]
gi|146146701|gb|EAR87359.2| hypothetical protein TTHERM_00058710 [Tetrahymena thermophila
SB210]
Length = 192
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 191 CRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI----VRIGPAHAKNPATA 246
C + + L + P+L ++ GS + + +V+++ + P+ + ++
Sbjct: 5 CMSSNSSLDFQSSFGQPDLSSLAFSGSANRKQNTKKIVKQIQEDYSIEKNPSTDCSSDSS 64
Query: 247 GSAAHPLS--SNFKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
A P + + +KT++C NF A G+C +G +C FAHG +L
Sbjct: 65 DQAMKPKTDETKYKTEMCKNFQATGTCNYGKKCKFAHGKQDL 106
>gi|66475376|ref|XP_627504.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
gi|46229274|gb|EAK90123.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
Length = 337
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 238 AHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
AH++ A S FKT LC + KGSC GD C +AHG ELR
Sbjct: 69 AHSRKELRATSDL------FKTSLCVYWIKGSCVVGDSCRYAHGIEELR 111
>gi|443899276|dbj|GAC76607.1| predicted metal-dependent hydrolase [Pseudozyma antarctica T-34]
Length = 407
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 235 IGPAHAKNPATAGSAAHPLSSN-------FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+ P AK+ + AA P S FKT++C N+ +G C +G+RC +AHG ELR
Sbjct: 285 VEPRQAKDAWSGRQAAAPSPSPNNKKMELFKTEICRNWEERGKCLYGNRCQYAHGEEELR 344
Query: 287 K 287
+
Sbjct: 345 R 345
>gi|119608345|gb|EAW87939.1| hCG31253, isoform CRA_b [Homo sapiens]
Length = 530
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 265 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 324
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 325 QQIEVARQLIDEKV 338
>gi|410048467|ref|XP_003314464.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Pan
troglodytes]
Length = 391
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 9/53 (16%)
Query: 243 PATAGSAAHPL--------SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
P +AAHP SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 146 PGLQAAAAHPKQPGGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 198
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 155 PGPAASFG--ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRN 211
PG + +G T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++
Sbjct: 260 PGGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKI 319
Query: 212 IELEGSFEQIKQA 224
+ G+ ++I+QA
Sbjct: 320 FNVRGNRQEIEQA 332
>gi|410076854|ref|XP_003956009.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
gi|372462592|emb|CCF56874.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
Length = 298
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 212 IELEGSFEQIKQASAMVRELIVRIG---PAHAKNPATAGSAAHPL--------SSNFKTK 260
+E+ +F + E + R+ P+ +N SA+ L + FKT+
Sbjct: 137 VEINNAFTPSDSLLPLTTENLQRLSLSEPSEQQNTLNVHSASEKLMKPQNTINKTLFKTE 196
Query: 261 LCGNFA-KGSCTFGDRCHFAHGAAELR 286
LC +F KG C +G++C FAHG EL+
Sbjct: 197 LCESFTTKGFCKYGNKCQFAHGLTELK 223
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
K+ V + G +IGK G + + +GAK+ I RD +ADP R +EL GS E I +A
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA 238
Query: 225 SAMVRELIVR 234
+++++I
Sbjct: 239 EKLIKDVIAE 248
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDH--EADPN-LRNIE 213
A + GA+ +I V G IIGKGG K + ++GA++ I H E D + R +
Sbjct: 265 AQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVR 324
Query: 214 LEGSFEQIKQASAMVRELI 232
+ G +QI+ A M++E++
Sbjct: 325 VTGDKKQIEMAREMIKEVM 343
>gi|348536136|ref|XP_003455553.1| PREDICTED: far upstream element-binding protein 3 [Oreochromis
niloticus]
Length = 556
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 154 APGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLR 210
+PGP ++ A G +IGKGG K I +Q+GA + ++ + DPN R
Sbjct: 351 SPGPVQE------VTYTIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTR 404
Query: 211 NIELEGSFEQIKQASAMVRELI----VRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFA 266
+ G+ +Q+ A ++ + I + +P T G AAH F T + GN
Sbjct: 405 VFTIRGTAQQMDLARQLIDDKIGGSGIMSNGGFGFSPFTQGPAAHQNGQTFLTGVWGNTY 464
Query: 267 KGSC 270
+ S
Sbjct: 465 QTSW 468
>gi|313222163|emb|CBY39153.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 210 RNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPA-----TAGSAAHPLSSNFKTKLCGN 264
+ I+ F+ + AS ++ I+ + P +A +A ++S +KT+LC +
Sbjct: 171 QQIDANDLFQNLNLASKGAQQFILVPNSIFSGAPMLNAQMSAQAANAQMNSLYKTELCRS 230
Query: 265 FAKGSCTFGDRCHFAHGAAELR 286
+ G+C + DRC FAHG ELR
Sbjct: 231 WQFGTCKYVDRCLFAHGEHELR 252
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 233 VRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
VR H K+ A H + S +KT+LC F +G+C +GD+C FAHG +L
Sbjct: 280 VRCNFVHDKDEHR--QAKHSVPSLYKTRLCRTFIERGTCPYGDKCDFAHGTKDL 331
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 151 PPPAPGPAASFGAS--ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN 208
PPPA G A A+ + ++++ LAGAIIGK G ++I + +GA ++I + +
Sbjct: 329 PPPAMGAGAGKPAAFNGSTQVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSD 388
Query: 209 LRNIELEGSFEQIKQASAMVRELI 232
R I + G+ QI+ A ++++ +
Sbjct: 389 ERIITINGTDSQIQMAQYLLQQCV 412
>gi|336376373|gb|EGO04708.1| hypothetical protein SERLA73DRAFT_173919 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389412|gb|EGO30555.1| hypothetical protein SERLADRAFT_454858 [Serpula lacrymans var.
lacrymans S7.9]
Length = 344
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KGSC +G +C FAHG E+RK A
Sbjct: 24 YKTELCRSWEEKGSCRYGSKCQFAHGEEEIRKVA 57
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 151 PPPAPGPAASFGAS--ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN 208
PPPA G A A+ + ++++ LAGAIIGK G ++I + +GA ++I + +
Sbjct: 331 PPPAMGAGAGKPAAFNGSTQVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSD 390
Query: 209 LRNIELEGSFEQIKQASAMVRELI 232
R I + G+ QI+ A ++++ +
Sbjct: 391 ERIITINGTDSQIQMAQYLLQQCV 414
>gi|294945697|ref|XP_002784798.1| hypothetical protein Pmar_PMAR017482 [Perkinsus marinus ATCC 50983]
gi|239898006|gb|EER16594.1| hypothetical protein Pmar_PMAR017482 [Perkinsus marinus ATCC 50983]
Length = 247
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
KTK C +FA+G C FGD+C FAH ELR
Sbjct: 143 KTKACRHFARGYCAFGDKCAFAHTVDELR 171
>gi|397585142|gb|EJK53191.1| hypothetical protein THAOC_27427 [Thalassiosira oceanica]
Length = 921
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 250 AHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
A P FKT+LC NF K G C +G C +AHGA ELR
Sbjct: 413 AKPKEGKFKTELCRNFEKPGGCPYGSSCTYAHGAQELR 450
>gi|359478697|ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containing protein 24-like
[Vitis vinifera]
Length = 843
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAK--GSCTFGDRCHFAHGAAELRK 287
+PA + + HPL +KT LC F GSC+ GD C +AHG ELR+
Sbjct: 58 DPADSDNCRHPL---WKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQ 102
>gi|339256988|ref|XP_003370127.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964971|gb|EFV49843.1| conserved hypothetical protein [Trichinella spiralis]
Length = 181
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 39/146 (26%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F + GC FG +C F H NL + P+ RN
Sbjct: 31 KTRMCRYFVNGPGCRFGSNCFFAH-------------NLVELRPSMYRNF---------- 67
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPP 152
+ K+ C L + CK+G +C + HG+ + + + P +F ++ P
Sbjct: 68 -LYKTEPCRNLRTWGHCKYGPRCLYLHGDEQF---LIYARTPPSSFASI---------QP 114
Query: 153 PAPG--PAASFGASA-TAKISVDASL 175
PG P FG+SA +A +S + S+
Sbjct: 115 IWPGTSPVPFFGSSARSASLSTELSI 140
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 232 IVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKG-SCTFGDRCHFAHGAAELR 286
+V + N T + P + +KT++C F G C FG C FAH ELR
Sbjct: 5 LVDVASEKRINEETVNNNKKPNLALYKTRMCRYFVNGPGCRFGSNCFFAHNLVELR 60
>gi|403345758|gb|EJY72260.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 296
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+ C F T C G CHF H ++ A+P + P +N
Sbjct: 58 KTSLCKHFMQTKHCHVGAKCHFAH-------GEHELRKADDALPIEQTMKMMNIPYNN-- 108
Query: 93 TVVKSRMCNRLNSAEG-CKFGDKCHFAHGEWELGKP 127
K++ C + G CKFG C FAHG +EL P
Sbjct: 109 --YKTQTCKYFELSGGNCKFGKNCSFAHGGFELRNP 142
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 246 AGSAAHPL---SSNFKTKLCGNFAKGS-CTFGDRCHFAHGAAELRK 287
G A +PL ++ +KT LC +F + C G +CHFAHG ELRK
Sbjct: 43 VGGAMNPLGGYNNLYKTSLCKHFMQTKHCHVGAKCHFAHGEHELRK 88
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 255 SNFKTKLCGNF--AKGSCTFGDRCHFAHGAAELR 286
+N+KT+ C F + G+C FG C FAHG ELR
Sbjct: 107 NNYKTQTCKYFELSGGNCKFGKNCSFAHGGFELR 140
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ K+ +C + C G KCHFAHGE EL K
Sbjct: 55 NLYKTSLCKHFMQTKHCHVGAKCHFAHGEHELRK 88
>gi|334328570|ref|XP_001368672.2| PREDICTED: tristetraprolin-like [Monodelphis domestica]
Length = 400
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 234 RIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
R GP ++ A A S SS +KT+LC F++ G C +G +C FAHG ELR
Sbjct: 141 RAGPVPSEGAAGAAS-----SSRYKTELCRTFSESGKCRYGSKCQFAHGPGELR 189
>gi|297746249|emb|CBI16305.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAK--GSCTFGDRCHFAHGAAELRK 287
+PA + + HPL +KT LC F GSC+ GD C +AHG ELR+
Sbjct: 58 DPADSDNCRHPL---WKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQ 102
>gi|405957186|gb|EKC23416.1| RNA-binding protein Nova-1 [Crassostrea gigas]
Length = 561
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 148 RYEPPPAPGPAAS---FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
R +P P P P + F KI V S AG +IGKGG KQI ++GA + I
Sbjct: 100 REKPDPNPKPEETNKNFERHRQVKILVPNSTAGMVIGKGGNYIKQIKEESGAYIQISQKS 159
Query: 205 ADPNL--RNIELEGSFEQIKQASAMVRELIVR 234
+ NL R I + G + ++A ++ + IV
Sbjct: 160 KETNLPERCITVAGEIDNNRKAVELILQKIVE 191
>gi|313235823|emb|CBY19807.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 210 RNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPA-----TAGSAAHPLSSNFKTKLCGN 264
+ I+ F+ + AS ++ I+ + P +A +A ++S +KT+LC +
Sbjct: 171 QQIDANDLFQNLNLASKGAQQFILVPNSIFSGAPMLNAQMSAQAANAQMNSLYKTELCRS 230
Query: 265 FAKGSCTFGDRCHFAHGAAELR 286
+ G+C + DRC FAHG ELR
Sbjct: 231 WQFGTCKYIDRCLFAHGEHELR 252
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 233 VRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
VR H K+ A H + S +KT+LC F +G+C +GD+C FAHG +L
Sbjct: 280 VRCNFVHDKDEHR--QAKHSVPSLYKTRLCRTFIERGTCPYGDKCDFAHGTKDL 331
>gi|294952825|ref|XP_002787468.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
gi|239902470|gb|EER19264.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
Length = 598
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
KT LC +A+G CT GD C +AHG ELR T
Sbjct: 241 KTTLCRLYAQGKCTLGDDCKYAHGPKELRAT 271
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
KT++C + +G C +G +C+FAH A ELR+
Sbjct: 205 LKTRVCKLYLEGKCRYGKKCYFAHNADELRE 235
>gi|1575609|gb|AAC50893.1| FUSE binding protein 3, partial [Homo sapiens]
Length = 600
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 380 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 439
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 440 QQIEVARQLIDEKV 453
>gi|355567401|gb|EHH23742.1| hypothetical protein EGK_07278, partial [Macaca mulatta]
gi|355752991|gb|EHH57037.1| hypothetical protein EGM_06596, partial [Macaca fascicularis]
Length = 544
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 324 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 383
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 384 QQIEVARQLIDEKV 397
>gi|345327623|ref|XP_001506617.2| PREDICTED: far upstream element-binding protein 1-like
[Ornithorhynchus anatinus]
Length = 827
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 529 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 587
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G ++ +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 313 PAPGFHHGDGPGNSVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 372
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 373 KPLR---ITGDPYKVQQAKEMVLELI 395
>gi|426258121|ref|XP_004022667.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 404
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 326 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 385
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 386 QNAQYLLQ 393
>gi|417403740|gb|JAA48667.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 667
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 410 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 468
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 194 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 254 KPLR---ITGDPYKVQQAKEMVLELI 276
>gi|339247875|ref|XP_003375571.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971046|gb|EFV54885.1| conserved hypothetical protein [Trichinella spiralis]
Length = 198
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 39/146 (26%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F + GC FG SC F H NL + P+ RN
Sbjct: 31 KTRMCRYFVNGPGCRFGSSCFFAH-------------NLVELRPSMYRNF---------- 67
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPP 152
+ K+ C L + CK+G +C + HG+ + + + P +F ++ P
Sbjct: 68 -LYKTEPCRNLRTWGHCKYGPRCLYLHGDEQF---LIYARTPPSSFASI---------QP 114
Query: 153 PAPG--PAASFGASA-TAKISVDASL 175
PG P FG+SA +A +S + S+
Sbjct: 115 IWPGTSPVPFFGSSARSASLSTELSI 140
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 232 IVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKG-SCTFGDRCHFAHGAAELR 286
+V + N T + P + +KT++C F G C FG C FAH ELR
Sbjct: 5 LVDVASEKRINEETVNNNKKPNLALYKTRMCRYFVNGPGCRFGSSCFFAHNLVELR 60
>gi|357135695|ref|XP_003569444.1| PREDICTED: zinc finger CCCH domain-containing protein 9-like
[Brachypodium distachyon]
Length = 346
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD+C FAHG AELR
Sbjct: 272 FKTELCNKWEETGACPYGDQCQFAHGVAELR 302
>gi|426363332|ref|XP_004048795.1| PREDICTED: far upstream element-binding protein 3 [Gorilla gorilla
gorilla]
Length = 572
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARQLIDEKV 425
>gi|218199064|gb|EEC81491.1| hypothetical protein OsI_24837 [Oryza sativa Indica Group]
Length = 477
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 33 KSKPCTKFFSTA-GCPFGESCHFLHYFPGGYN------AVAQMMNLPQAVPAPSRNMAVP 85
K+K C +++S GCP G +C + H G + AV+ + + + + + A
Sbjct: 360 KTKLCAEYYSRGLGCPRGNTCKYAH----GEDDLRLVVAVSSLADAGEGSSSSDSSFA-- 413
Query: 86 PPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
A G K+++C S C F C FAHGE ELGK
Sbjct: 414 --ALGGEDKYKTKLCKTFTSGGLCLFAANCRFAHGEVELGK 452
>gi|426215782|ref|XP_004002148.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Ovis
aries]
Length = 665
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 410 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 468
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 194 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 254 KPLR---ITGDPYKVQQAKEMVLELI 276
>gi|221119958|ref|XP_002163544.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Hydra
magnipapillata]
Length = 745
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 131 SHDDPRAFGAVPGRMGGRYE-PPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQ 189
SH+ + P R + P+ G A+ I V L G +IGKGG+ ++
Sbjct: 71 SHEHSGNVNSTPSRQLSDFNNQKPSNGFASQGHQDNILVIDVSNELVGKVIGKGGIKIRE 130
Query: 190 ICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHA 240
+ +GA++ I + A + IE+ G+ Q ++A ++ +L ++ G A
Sbjct: 131 LQDVSGARIRINQNSASLSKTPIEISGTLAQREKAKKLIEDLTIQPGDLQA 181
>gi|357477989|ref|XP_003609280.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510335|gb|AES91477.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 297
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 25/128 (19%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQM-----------MNLPQ 73
+ + + K K C K++ CP+G+ C FLH P + + + P+
Sbjct: 138 DEDQKIIHKMKLCKKYYIGEECPYGDKCSFLHEDPARFRDASWKTRECSAISVGNIGSPK 197
Query: 74 AVPAPSRNM----AVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG-------EW 122
+ S N+ AV PA + K+++C ++ C FG+ C FAHG EW
Sbjct: 198 SFGYGSNNLEGIRAVNKPARSA--YWKTKLCQWQHTG-SCPFGETCDFAHGEAGKAGSEW 254
Query: 123 ELGKPIAI 130
G I I
Sbjct: 255 AFGILIII 262
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 85/222 (38%), Gaps = 52/222 (23%)
Query: 78 PSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHD--DP 135
PSR + PP K+R+C + C+ G+ C++AHG E+ +P + DP
Sbjct: 62 PSRMIQPPPNRGTSSIFFKTRICTKFRFGT-CRNGENCNYAHGADEIRQPPRNWQELVDP 120
Query: 136 RAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQT- 194
R ++ R +PP + II K + K +
Sbjct: 121 R--NEERHQVETRQQPP-------------------NWDEDQKIIHKMKLCKKYYIGEEC 159
Query: 195 --GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHP 252
G K S HE DP + + AS RE I + +P + G ++
Sbjct: 160 PYGDKCSFL-HE-DP-----------ARFRDASWKTRECSA-ISVGNIGSPKSFGYGSNN 205
Query: 253 L-----------SSNFKTKLCGNFAKGSCTFGDRCHFAHGAA 283
L S+ +KTKLC GSC FG+ C FAHG A
Sbjct: 206 LEGIRAVNKPARSAYWKTKLCQWQHTGSCPFGETCDFAHGEA 247
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT++C F G+C G+ C++AHGA E+R+
Sbjct: 79 FKTRICTKFRFGTCRNGENCNYAHGADEIRQ 109
>gi|169843403|ref|XP_001828431.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
gi|116510528|gb|EAU93423.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
Length = 738
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KGSC +G +C FAHG ELRK
Sbjct: 406 YKTELCRSWEEKGSCRYGSKCQFAHGEEELRK 437
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ K+ +C C++G KC FAHGE EL K
Sbjct: 405 LYKTELCRSWEEKGSCRYGSKCQFAHGEEELRK 437
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V G IIGKGG K I +Q+GA++ ++ + +DPN++ + GS +QI A
Sbjct: 380 TVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYARQ 439
Query: 227 MVRELI 232
+V E I
Sbjct: 440 LVEEKI 445
>gi|402896286|ref|XP_003911235.1| PREDICTED: far upstream element-binding protein 3 [Papio anubis]
Length = 572
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARQLIDEKV 425
>gi|100816392|ref|NP_003925.1| far upstream element-binding protein 3 [Homo sapiens]
gi|297685554|ref|XP_002820351.1| PREDICTED: far upstream element-binding protein 3 [Pongo abelii]
gi|37078499|sp|Q96I24.2|FUBP3_HUMAN RecName: Full=Far upstream element-binding protein 3;
Short=FUSE-binding protein 3
gi|119608343|gb|EAW87937.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|119608344|gb|EAW87938.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|187950609|gb|AAI37339.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|187951661|gb|AAI37341.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|194379238|dbj|BAG58170.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARQLIDEKV 425
>gi|390466103|ref|XP_003733520.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Callithrix jacchus]
gi|395821884|ref|XP_003784260.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Otolemur garnettii]
gi|403257698|ref|XP_003921435.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410967580|ref|XP_003990296.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Felis
catus]
Length = 665
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 410 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 468
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 194 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 254 KPLR---ITGDPYKVQQAKEMVLELI 276
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 410 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 468
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 194 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 254 KPLR---ITGDPYKVQQAKEMVLELI 276
>gi|71411456|ref|XP_807977.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|71416709|ref|XP_810352.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70872086|gb|EAN86126.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|70874868|gb|EAN88501.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 138
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C + K G C +GDRC FAHG ELR TA
Sbjct: 87 KTKMCIYWEKNGECNWGDRCAFAHGQGELRATA 119
>gi|406607221|emb|CCH41482.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 503
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 209 LRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSN------------ 256
L NI+ S + I SA+ E ++++ G A SS
Sbjct: 381 LNNIQQNSSKDSI---SALTEENLIKLQNTPKDINGVLGENATSTSSQGGLDKQANVNTE 437
Query: 257 -FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC F K GSC +G++C FAHG EL+
Sbjct: 438 LYKTELCSTFNKTGSCPYGNKCQFAHGGNELK 469
>gi|301101720|ref|XP_002899948.1| RNA-binding protein NOB1 [Phytophthora infestans T30-4]
gi|262102523|gb|EEY60575.1| RNA-binding protein NOB1 [Phytophthora infestans T30-4]
Length = 500
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 21/86 (24%)
Query: 36 PCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVV 95
PC F + GC +G+ C F H A + P + + +P
Sbjct: 178 PCKYFGTAMGCKYGDECRFTH-------DEAAAASAEDGAETPRKKVDIP---------- 220
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGE 121
C N+ EGCK+GD C F H E
Sbjct: 221 ----CRFFNTPEGCKYGDDCSFVHEE 242
>gi|75244344|sp|Q8GVZ8.1|C3H48_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
48; Short=OsC3H48
gi|27260933|dbj|BAC45051.1| hypothetical protein [Oryza sativa Japonica Group]
gi|34394404|dbj|BAC83497.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125599070|gb|EAZ38646.1| hypothetical protein OsJ_23036 [Oryza sativa Japonica Group]
Length = 496
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 33 KSKPCTKFFSTA-GCPFGESCHFLHYFPGGYN------AVAQMMNLPQAVPAPSRNMAVP 85
K+K C +++S GCP G +C + H G + AV+ + + + + + A
Sbjct: 379 KTKLCAEYYSRGLGCPRGNTCKYAH----GEDDLRLVVAVSSLADAGEGSSSSDSSFA-- 432
Query: 86 PPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
A G K+++C S C F C FAHGE ELGK
Sbjct: 433 --ALGGEDKYKTKLCKTFTSGGLCLFAANCRFAHGEVELGK 471
>gi|37786613|gb|AAR02856.1| CCCH zinc-finger protein [Trypanosoma cruzi]
Length = 138
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C + K G C +GDRC FAHG ELR TA
Sbjct: 87 KTKMCIYWEKNGECNWGDRCAFAHGQGELRATA 119
>gi|268557114|ref|XP_002636546.1| Hypothetical protein CBG23235 [Caenorhabditis briggsae]
Length = 340
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 45 GCPFGESCHFLHYFPGGYNAVAQM--MNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNR 102
G P G H G+N + + PQ P + N AVPPP + P + K+ +C
Sbjct: 101 GTPIGSQ----HQMSIGHNLIGNSSPFSTPQHTPLATPNGAVPPPKN--PKLYKTELCRS 154
Query: 103 LNSAEGCKFGDKCHFAHGEWE 123
C +G++C +AHGE E
Sbjct: 155 WMDHGRCNYGERCQYAHGEVE 175
>gi|387015918|gb|AFJ50078.1| Far upstream element-binding protein 1-like [Crotalus adamanteus]
Length = 682
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 407 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 466
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 204 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---ITGDP 260
Query: 219 EQIKQASAMVRELI 232
+++QA MV +LI
Sbjct: 261 YKVQQAKEMVLDLI 274
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 155 PGPAASFG--ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRN 211
PG + +G T++ +V A AG +IGKGG + K+ICR +GA + I ++ DP+++
Sbjct: 260 PGGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKI 319
Query: 212 IELEGSFEQIKQA 224
+ G+ ++I+QA
Sbjct: 320 FNVRGNRQEIEQA 332
>gi|383873059|ref|NP_001244672.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|380787701|gb|AFE65726.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|383414151|gb|AFH30289.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|384950158|gb|AFI38684.1| far upstream element-binding protein 3 [Macaca mulatta]
Length = 572
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARQLIDEKV 425
>gi|332833136|ref|XP_520317.3| PREDICTED: far upstream element-binding protein 3 [Pan troglodytes]
gi|397503629|ref|XP_003822422.1| PREDICTED: far upstream element-binding protein 3 [Pan paniscus]
gi|410219718|gb|JAA07078.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410292988|gb|JAA25094.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410350985|gb|JAA42096.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
Length = 572
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + +DPNLR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQ 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
>gi|298712297|emb|CBJ26748.1| hypothetical protein Esi_0042_0128 [Ectocarpus siliculosus]
Length = 503
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 253 LSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+ +N KT +C ++ +G C FG RC FAHGA ELR
Sbjct: 31 IEANRKTAICKHWLQGVCPFGARCAFAHGAKELR 64
>gi|389593131|ref|XP_003721819.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438321|emb|CBZ12073.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 150
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
S K+K+C + K G+C +GDRC FAHGA ELR A
Sbjct: 104 SKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPA 139
>gi|417403610|gb|JAA48604.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 647
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|334349275|ref|XP_003342183.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1-like [Monodelphis domestica]
Length = 676
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 369 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 427
>gi|39992630|gb|AAH64454.1| Khsrp protein [Mus musculus]
Length = 311
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 1 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 59
>gi|313233410|emb|CBY24525.1| unnamed protein product [Oikopleura dioica]
Length = 639
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
ISV L G IIGK G +I ++TG ++ I + + R L G+F Q+ A +
Sbjct: 49 ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVPNSTGGSERPCTLTGTFHQVHHAKQKL 108
Query: 229 RELIVRIGP 237
E+I R GP
Sbjct: 109 NEIITRGGP 117
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEAD--PNLRNIELEGSFEQIKQASAMV 228
V AS AG +IGKGG N + I +GA + I + +D N + + G+ +QI++A ++
Sbjct: 325 VPASRAGVVIGKGGENIRLIKENSGAFVQIEKNASDKGDNWKTFIIRGTEQQIQEAQKLI 384
Query: 229 RELIVRIGPAHAKNPATAGSAAHPLS 254
++ IGP P T A+H +
Sbjct: 385 QDK-AGIGP-----PNTHTQASHSMD 404
>gi|62088312|dbj|BAD92603.1| far upstream element-binding protein variant [Homo sapiens]
Length = 493
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 239 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 297
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 23 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 82
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 83 KPLR---ITGDPYKVQQAKEMVLELI 105
>gi|57529674|ref|NP_001006535.1| far upstream element-binding protein 1 [Gallus gallus]
gi|53136708|emb|CAG32683.1| hypothetical protein RCJMB04_32l4 [Gallus gallus]
Length = 627
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 371 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKI 429
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 170 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 229
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 230 KPLR---ITGDPYKVQQAKEMVLELI 252
>gi|71024531|ref|XP_762495.1| hypothetical protein UM06348.1 [Ustilago maydis 521]
gi|46097598|gb|EAK82831.1| hypothetical protein UM06348.1 [Ustilago maydis 521]
Length = 1330
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI--RDHEADP------NLRN----- 211
+ +I + ASL +IG G N K I QTG K++I RD ADP N RN
Sbjct: 200 VSTQIMIPASLRAYVIGAKGKNLKVITEQTGVKVNIPPRDPAADPSADVDVNQRNNIDYD 259
Query: 212 ------IELEGSFEQIKQASAMVRELI 232
I LEG +KQA AM++ ++
Sbjct: 260 NDEQIPITLEGDEINVKQAQAMIQAIV 286
>gi|417403606|gb|JAA48602.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 646
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|291240055|ref|XP_002739936.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 355
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 98 SSRYKTELCRPFEENGTCKYGDKCQFAHGDHELR 131
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+ +C CK+GDKC FAHG+ EL
Sbjct: 102 KTELCRPFEENGTCKYGDKCQFAHGDHEL 130
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 247 GSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
G + HP +KT+LC F G C +G RCHF H A E R
Sbjct: 132 GLSRHP---KYKTELCRTFHTIGFCPYGPRCHFIHNAEEKR 169
>gi|291240057|ref|XP_002739937.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 367
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 110 SSRYKTELCRPFEENGTCKYGDKCQFAHGDHELR 143
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+ +C CK+GDKC FAHG+ EL
Sbjct: 114 KTELCRPFEENGTCKYGDKCQFAHGDHEL 142
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 247 GSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
G + HP +KT+LC F G C +G RCHF H A E R
Sbjct: 144 GLSRHP---KYKTELCRTFHTIGFCPYGPRCHFIHNAEEKR 181
>gi|395730346|ref|XP_002810731.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Pongo abelii]
Length = 667
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 126 KPIAISHDDPRAFGA---VPGRMGGRYEPPPAP-GPAASFGAS----ATAKISVDASLAG 177
KP+ I+ D + A V + R + PP G SFG S + ++ V + G
Sbjct: 212 KPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGMSGGQRSIGEVIVPRASVG 271
Query: 178 AIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
IIGKGG K++ ++GAK+ + D++ R ++G+ EQI +A+ + EL+ + G
Sbjct: 272 MIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAVIQGTAEQIAKATQFISELVKKSG 331
Query: 237 PA 238
A
Sbjct: 332 AA 333
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
G +IG+GG QI QT ++ + N+R L+GS + +A AM+ E+I R G
Sbjct: 83 GNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSVDRARAMINEVIARAG 142
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 130 ISHDDPRA-FGAVPGRMGGRYEPPPAP------GPAASFGASATAKISVDASLAGAIIGK 182
+S D RA V R G R PPP G G T ++ + + G +IGK
Sbjct: 125 MSVDRARAMINEVIARAGNR--PPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGK 182
Query: 183 GGVNSKQICRQTGAKLSI--RDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GG K I QTG K+ + + E+ + + + G E+++ A MV E++
Sbjct: 183 GGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEEIL 234
>gi|313246366|emb|CBY35281.1| unnamed protein product [Oikopleura dioica]
Length = 641
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
ISV L G IIGK G +I ++TG ++ I + + R L G+F Q+ A +
Sbjct: 49 ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVPNSTGGSERPCTLTGTFHQVHHAKQKL 108
Query: 229 RELIVRIGP 237
E+I R GP
Sbjct: 109 NEIITRGGP 117
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEAD--PNLRNIELEGSFEQIKQASAMV 228
V AS AG +IGKGG N + I +GA + I + +D N + + G+ +QI++A ++
Sbjct: 327 VPASRAGVVIGKGGENIRLIKENSGAFVQIEKNASDKGDNWKTFIIRGTEQQIQEAQKLI 386
Query: 229 RELIVRIGPAHAKNPATAGSAAHPLS 254
++ IGP P T A+H +
Sbjct: 387 QDK-AGIGP-----PNTHTQASHSMD 406
>gi|449508372|ref|XP_002188229.2| PREDICTED: far upstream element-binding protein 1 [Taeniopygia
guttata]
Length = 592
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 335 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKI 394
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 120 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 179
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 180 KPLR---ITGDPYKVQQAKEMVLELI 202
>gi|426215780|ref|XP_004002147.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Ovis
aries]
Length = 655
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|410967578|ref|XP_003990295.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Felis
catus]
Length = 655
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|348508156|ref|XP_003441621.1| PREDICTED: hypothetical protein LOC100704231 [Oreochromis
niloticus]
Length = 404
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 244 ATAGSAAHPL--SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+T + P+ S+ +KT+LC F + GSC +G +C FAHG AELR
Sbjct: 121 STVSAQTQPMVSSNRYKTELCRGFQETGSCKYGSKCQFAHGEAELR 166
>gi|449550650|gb|EMD41614.1| hypothetical protein CERSUDRAFT_128533 [Ceriporiopsis subvermispora
B]
Length = 780
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KGSC +G +C FAHG ELRK
Sbjct: 465 YKTELCRSWEEKGSCRYGAKCQFAHGEEELRK 496
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 73 QAVPAPSRNMAV---PPPASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAHGEW 122
QA+P PS + P +NGP+ + K+ +C C++G KC FAHGE
Sbjct: 433 QAIPVPSTPGSAGTATPNLNNGPSANNRKLGLYKTELCRSWEEKGSCRYGAKCQFAHGEE 492
Query: 123 ELGK 126
EL K
Sbjct: 493 ELRK 496
>gi|410033139|ref|XP_003949493.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|426330100|ref|XP_004026062.1| PREDICTED: far upstream element-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 655
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|397600852|gb|EJK57746.1| hypothetical protein THAOC_22179 [Thalassiosira oceanica]
Length = 779
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 250 AHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
A P FKT+LC NF K G C +G C +AHGA ELR
Sbjct: 281 ATPKEGKFKTELCRNFEKPGGCPYGSSCTYAHGAQELR 318
>gi|359319788|ref|XP_003639165.1| PREDICTED: far upstream element-binding protein 1-like [Canis lupus
familiaris]
Length = 663
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|449688559|ref|XP_002159721.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Hydra
magnipapillata]
Length = 332
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 115 SSRYKTELCRPFEENGTCKYGDKCQFAHGFHELR 148
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 36/148 (24%)
Query: 20 KKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS 79
++ K S + K++ C F C +G+ C F H G++ + + P+
Sbjct: 106 QQRKRNSTNSSRYKTELCRPFEENGTCKYGDKCQFAH----GFHELRGLNRHPK------ 155
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE-------LGKPIAISH 132
K+ C ++ C +G +CHF H + E LG+ +IS
Sbjct: 156 ---------------YKTEFCRTYHTIGFCPYGPRCHFIHNDEEKKLALTSLGRSCSISS 200
Query: 133 DDPR----AFGAVPGRMGGRYEPPPAPG 156
D A P G PP +PG
Sbjct: 201 MDSIPPSPAHDVAPSPFGNSLTPPLSPG 228
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|390466101|ref|XP_002751042.2| PREDICTED: far upstream element-binding protein 1 isoform 1
[Callithrix jacchus]
gi|395821882|ref|XP_003784259.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Otolemur garnettii]
gi|403257696|ref|XP_003921434.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410967576|ref|XP_003990294.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Felis
catus]
Length = 644
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|311259162|ref|XP_003127965.1| PREDICTED: far upstream element-binding protein 1 [Sus scrofa]
gi|426215778|ref|XP_004002146.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Ovis
aries]
Length = 644
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 152 PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN 211
PP P P + T + + S A AIIG G N + R +GA ++I++ + P
Sbjct: 270 PPTPAPVIT---QVTQHMQIPLSYADAIIGGAGANISYMRRTSGATITIQETRSVPGEMT 326
Query: 212 IELEGSFEQIKQASAMVR 229
+E+ GS Q++ A +++
Sbjct: 327 VEIHGSASQVQTAQQLIQ 344
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|268560926|ref|XP_002646323.1| C. briggsae CBR-MEX-5 protein [Caenorhabditis briggsae]
Length = 474
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 255 SNFKTKLCGNFAKGS--CTFGDRCHFAHGAAELRKTAI 290
+N+KT+LC A G+ C G RC FAHG ELR T +
Sbjct: 274 ANYKTRLCMMHASGTRPCDMGSRCKFAHGLKELRSTDV 311
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|325192979|emb|CCA27361.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 275
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS FKT+LC F + GSC +G +C FAHG +ELR+
Sbjct: 76 SSLFKTELCKRFREFGSCRYGAKCQFAHGFSELRQVV 112
>gi|116003917|ref|NP_001070314.1| far upstream element-binding protein 1 [Bos taurus]
gi|115305288|gb|AAI23717.1| Far upstream element (FUSE) binding protein 1 [Bos taurus]
Length = 643
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|291398647|ref|XP_002715950.1| PREDICTED: far upstream element-binding protein [Oryctolagus
cuniculus]
Length = 643
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|74144445|dbj|BAE36070.1| unnamed protein product [Mus musculus]
Length = 463
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP + G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 361 YEPQGSSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 420
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 421 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G + T ++S+ LAGAIIGKGG ++I +GA ++I + R I + GS QI
Sbjct: 304 GHTETTQVSIPKDLAGAIIGKGGARIRKIRGDSGASITIDEPRPGSTERIITISGSSHQI 363
Query: 222 KQASAMVRE 230
+A ++++
Sbjct: 364 WKAQYLLQQ 372
>gi|301773894|ref|XP_002922363.1| PREDICTED: far upstream element-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 646
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|395536741|ref|XP_003770370.1| PREDICTED: far upstream element-binding protein 1 [Sarcophilus
harrisii]
Length = 621
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 365 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 424
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 150 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 209
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 210 KPLR---ITGDPYKVQQAKEMVLELI 232
>gi|338725292|ref|XP_001496721.3| PREDICTED: far upstream element-binding protein 1 [Equus caballus]
Length = 644
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P + + T + + S A A+IG G + I R +GA ++I++ P N+E+ G
Sbjct: 379 PPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIG 438
Query: 217 SFEQIKQASAMVRELIVRIGP 237
S Q++ A +++ + P
Sbjct: 439 SASQVQTAQQLIQNFMAEAAP 459
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 347 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 406
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 407 QNAQYLLQ 414
>gi|322799634|gb|EFZ20906.1| hypothetical protein SINV_11495 [Solenopsis invicta]
Length = 388
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC + + GSC +GD+C FAHG ELR A
Sbjct: 64 TSRYKTELCRPYEENGSCKYGDKCQFAHGYGELRNLA 100
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|354468080|ref|XP_003496495.1| PREDICTED: far upstream element-binding protein 1-like [Cricetulus
griseus]
Length = 649
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 395 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 453
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 179 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 238
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 239 KPLR---ITGDPYKVQQAKEMVLELI 261
>gi|9665104|gb|AAF97295.1|AC010164_17 Hypothetical protein [Arabidopsis thaliana]
Length = 389
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
S T +I V +S G +IGKGG + + +GAK+ I RD EADP+ LR +E+ G+
Sbjct: 209 STTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSC 268
Query: 221 IKQASAMVRELIVRI 235
I++A ++ +I +
Sbjct: 269 IEKAEKLINAVIAEV 283
>gi|91080779|ref|XP_968440.1| PREDICTED: similar to Tis11-like protein [Tribolium castaneum]
Length = 250
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC + + G C +GD+C FAHG AELR A
Sbjct: 94 TSRYKTELCRPYEEFGVCKYGDKCQFAHGGAELRSLA 130
>gi|74223189|dbj|BAE40731.1| unnamed protein product [Mus musculus]
Length = 394
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 316 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 375
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 376 QNAQYLLQ 383
>gi|327276689|ref|XP_003223100.1| PREDICTED: far upstream element-binding protein 1-like [Anolis
carolinensis]
Length = 660
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 386 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 445
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 183 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---ITGDP 239
Query: 219 EQIKQASAMVRELI 232
+++QA MV +LI
Sbjct: 240 YKVQQAKEMVLDLI 253
>gi|344278782|ref|XP_003411171.1| PREDICTED: far upstream element-binding protein 1 [Loxodonta
africana]
Length = 642
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 387 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 445
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 171 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 230
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 231 KPLR---ITGDPYKVQQAKEMVLELI 253
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 390 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 448
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 186 NAFQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---ITGDP 242
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 243 YKVQQAKEMVLELI 256
>gi|307169532|gb|EFN62174.1| Protein TIS11 [Camponotus floridanus]
Length = 361
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC + + GSC +GD+C FAHG ELR A
Sbjct: 31 TSRYKTELCRPYEESGSCKYGDKCQFAHGYGELRNLA 67
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 355 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQI 414
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 415 QNAQYLLQ 422
>gi|116004517|ref|NP_001070621.1| zinc finger protein 36, C3H type-like 1a [Danio rerio]
gi|115313405|gb|AAI24506.1| Zinc finger protein 36, C3H type-like 2 [Danio rerio]
gi|182890842|gb|AAI65552.1| Zfp36l2 protein [Danio rerio]
Length = 374
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 142 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 175
>gi|229594824|ref|XP_001032359.3| zinc finger protein [Tetrahymena thermophila]
gi|225566553|gb|EAR84696.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 274
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
NP+ +G +KT +C +F G+C G+ CHFAHG E+R
Sbjct: 50 NPSNSGK--------YKTSICRHFRNGNCQLGNTCHFAHGQDEMRNV 88
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 132 HDDPRAFG-AVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQI 190
H A+G VP MGG P + PA S T ++ + S A A+IG G + I
Sbjct: 370 HQGISAYGREVP--MGG--HAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYI 425
Query: 191 CRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 233
R +GA ++I++ P +E+ G+ Q++ A +++ L +
Sbjct: 426 RRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFL 468
>gi|90076756|dbj|BAE88058.1| unnamed protein product [Macaca fascicularis]
Length = 536
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 281 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 339
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 65 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 124
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 125 KPLR---ITGDPYKVQQAKEMVLELI 147
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 142 PGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR 201
PG GG PP G S ++++ LAGAIIGKGG ++I ++GA ++I
Sbjct: 278 PGNFGG----PPLGGEKNS------TQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITID 327
Query: 202 DHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
+ N R I + G+ QI+ A ++++ +V +
Sbjct: 328 EPLPGSNDRIITISGTPNQIQMAQYLLQQRLVYL 361
>gi|358057390|dbj|GAA96739.1| hypothetical protein E5Q_03410 [Mixia osmundae IAM 14324]
Length = 924
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC ++ KG+C +G+RC FAHG ELR
Sbjct: 643 YKTELCRSWEEKGACRYGNRCQFAHGQKELR 673
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 67 QMMNLPQAVPAPSRNMAVPPPASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAH 119
++ NL A + + ++V P GP+ + K+ +C C++G++C FAH
Sbjct: 608 RIANLRAAYESSTGKLSVNPDEPLGPSPNNRKFALYKTELCRSWEEKGACRYGNRCQFAH 667
Query: 120 GEWEL 124
G+ EL
Sbjct: 668 GQKEL 672
>gi|340500442|gb|EGR27318.1| hypothetical protein IMG5_197860 [Ichthyophthirius multifiliis]
Length = 173
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
+K LC NF G C G RCHFAHG E+R AI
Sbjct: 9 YKRTLCKNFQTTGQCVMGIRCHFAHGQEEIRNPAI 43
>gi|348586742|ref|XP_003479127.1| PREDICTED: far upstream element-binding protein 1-like [Cavia
porcellus]
Length = 643
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|344231854|gb|EGV63733.1| hypothetical protein CANTEDRAFT_113770 [Candida tenuis ATCC 10573]
Length = 235
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNFAKGS-CTFGDRCHFAHGAAELRKT 288
+KT+LCG+F K S C +G++C FAHG EL++
Sbjct: 171 YKTELCGSFMKNSYCPYGNKCQFAHGECELKRV 203
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|297298126|ref|XP_002808510.1| PREDICTED: LOW QUALITY PROTEIN: butyrate response factor 1-like
[Macaca mulatta]
Length = 332
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 106 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 139
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC F G C +G RCHF H A E R A
Sbjct: 147 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALA 180
>gi|145532964|ref|XP_001452232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419920|emb|CAK84835.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC +F GSC G RC FAHG ELR
Sbjct: 11 NSKYKTQLCRHFVTIGSCALGARCQFAHGRQELR 44
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH---YFPGGYNAVAQ--MMNLPQAVPAPSRNMA--VP 85
K++ C F + C G C F H V N+ Q ++N +
Sbjct: 15 KTQLCRHFVTIGSCALGARCQFAHGRQELRTNNQVVTNYTQTNIQQNHQGDTQNRVQHIN 74
Query: 86 PPASNGPTVVKSRMCNRLNSAEG-CKFGDKCHFAHGEWELGK 126
P +N K+++C N G CK G C FAHGE EL +
Sbjct: 75 PMIAN----YKTQLCKHFNPQIGQCKNGSTCTFAHGEQELNQ 112
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 235 IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF--AKGSCTFGDRCHFAHGAAELRK 287
I H + +P+ +N+KT+LC +F G C G C FAHG EL +
Sbjct: 58 IQQNHQGDTQNRVQHINPMIANYKTQLCKHFNPQIGQCKNGSTCTFAHGEQELNQ 112
>gi|473912|gb|AAA21731.1| phosphoprotein [Mus cookii]
Length = 464
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|254584178|ref|XP_002497657.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
gi|238940550|emb|CAR28724.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
Length = 342
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG+C +G++C FAHG +EL+
Sbjct: 241 YKTELCESFTTKGTCRYGNKCQFAHGLSELK 271
>gi|83320094|ref|NP_001032742.1| far upstream element-binding protein 1 [Rattus norvegicus]
gi|123780056|sp|Q32PX7.1|FUBP1_RAT RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|79160170|gb|AAI07943.1| Far upstream element (FUSE) binding protein 1 [Rattus norvegicus]
Length = 639
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 384 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 442
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 168 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 227
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 228 KPLR---ITGDPYKVQQAKEMVLELI 250
>gi|193784719|dbj|BAG53872.1| unnamed protein product [Homo sapiens]
gi|193788384|dbj|BAG53278.1| unnamed protein product [Homo sapiens]
Length = 223
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI+ A
Sbjct: 149 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 208
Query: 226 AMVRELI 232
+++ +
Sbjct: 209 YLLQNSV 215
>gi|297827027|ref|XP_002881396.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327235|gb|EFH57655.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 253
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHF 278
Q S + + +GP + + P N+KT++C + G C FG CHF
Sbjct: 110 QETAESGRLESFAISLGPRGYGDASNVAQTLKP--PNWKTRICNKWETTGYCPFGTNCHF 167
Query: 279 AHGAAELRK 287
AHGA+EL +
Sbjct: 168 AHGASELHR 176
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 21 KSKHESESGVGS---KSKPCTKFFSTAGCPFG-ESCHFLHYFPGGYNAVAQMMNLPQAVP 76
K S S +G K+K C KF S CP+ SCHF H A
Sbjct: 57 KKTRSSSSEIGKSFFKTKLCFKFRS-GTCPYAANSCHFAHSSEELRRPPPPPNRQETAES 115
Query: 77 APSRNMAVPP------PASN-----GPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ A+ ASN P K+R+CN+ + C FG CHFAHG EL
Sbjct: 116 GRLESFAISLGPRGYGDASNVAQTLKPPNWKTRICNKWETTGYCPFGTNCHFAHGASEL 174
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 232 IVRIGPAHAKNPA--TAGSAAHPLSSNFKTKLCGNFAKGSCTF-GDRCHFAHGAAEL 285
+ + P ++P+ T S++ S FKTKLC F G+C + + CHFAH + EL
Sbjct: 44 VCSVNPDDTESPSKKTRSSSSEIGKSFFKTKLCFKFRSGTCPYAANSCHFAHSSEEL 100
>gi|334333295|ref|XP_003341704.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
Length = 470
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 392 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 451
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 452 QNAQYLLQ 459
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|296489207|tpg|DAA31320.1| TPA: far upstream element-binding protein [Bos taurus]
Length = 610
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 387 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|119583082|gb|EAW62678.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
gi|119583085|gb|EAW62681.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
Length = 463
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|393218795|gb|EJD04283.1| hypothetical protein FOMMEDRAFT_155406 [Fomitiporia mediterranea
MF3/22]
Length = 914
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KG+C +G +C FAHG E+RK A
Sbjct: 579 YKTELCRSWEEKGTCRYGPKCQFAHGEEEIRKVA 612
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 86 PPASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
PP S GP+ + K+ +C C++G KC FAHGE E+ K
Sbjct: 563 PPNSTGPSANNRKLGLYKTELCRSWEEKGTCRYGPKCQFAHGEEEIRK 610
>gi|313151207|ref|NP_998159.2| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 429
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
+ S G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+
Sbjct: 347 SYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGT 406
Query: 218 FEQIKQASAMVR 229
+QI+ A +++
Sbjct: 407 QDQIQNAQYLLQ 418
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 151 PPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLR 210
PPPAP T + + S A AIIG G N + R +GA +++++ P
Sbjct: 350 PPPAP-----VITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEM 404
Query: 211 NIELEGSFEQIKQASAMVRELIVRIG--PAHAKNPATAGSAAHPLSSNFKTKLCGNFAK- 267
+E+ G+ Q++ A +++ + PA+ + +G ++P ++ + N
Sbjct: 405 TVEIRGTATQVQTAQQLIQNFMAGASGPPANTYSSVDSGYNSYPTQNSMYSSPQPNTGHA 464
Query: 268 GSCTFGDRCHF 278
G T G H+
Sbjct: 465 GHSTGGYVSHY 475
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + +DPN++ + GS +QI A +V E I
Sbjct: 384 GLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYARQLVEEKI 442
>gi|375065844|ref|NP_001243477.1| heterogeneous nuclear ribonucleoprotein K [Canis lupus familiaris]
Length = 464
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|126723252|ref|NP_001075594.1| heterogeneous nuclear ribonucleoprotein K [Oryctolagus cuniculus]
gi|12230546|sp|O19049.1|HNRPK_RABIT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|2644968|emb|CAA05815.1| hnRNP-K protein [Oryctolagus cuniculus]
Length = 463
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 147 GRYEPPPAP---GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH 203
GR PP AP A + T + V S A A+IG G + I R +GA +SI+
Sbjct: 361 GRDAPPSAPPGNQNQAHGSSQVTHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQ-- 418
Query: 204 EADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
E P +E+ GS Q++ A +++ + P + P G P+ + +
Sbjct: 419 EGAPGEMTVEITGSASQVQTAQQLIKNFMAEASP---QGPPAPGPHGQPVDTGY 469
>gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
gi|14165435|ref|NP_112552.1| heterogeneous nuclear ribonucleoprotein K isoform b [Homo sapiens]
gi|16923998|ref|NP_476482.1| heterogeneous nuclear ribonucleoprotein K [Rattus norvegicus]
gi|114625188|ref|XP_001155028.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 17
[Pan troglodytes]
gi|114625190|ref|XP_001155252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 21
[Pan troglodytes]
gi|126334813|ref|XP_001368466.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Monodelphis domestica]
gi|296189583|ref|XP_002742833.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Callithrix jacchus]
gi|332236649|ref|XP_003267512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Nomascus leucogenys]
gi|332236653|ref|XP_003267514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Nomascus leucogenys]
gi|338719650|ref|XP_003364038.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475601|ref|XP_003809222.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2 [Pan
paniscus]
gi|397475605|ref|XP_003809224.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4 [Pan
paniscus]
gi|402897757|ref|XP_003911911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Papio anubis]
gi|402897759|ref|XP_003911912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Papio anubis]
gi|403300940|ref|XP_003941170.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Saimiri boliviensis boliviensis]
gi|410978215|ref|XP_003995491.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Felis catus]
gi|410978217|ref|XP_003995492.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Felis catus]
gi|426362133|ref|XP_004048235.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Gorilla gorilla gorilla]
gi|426362135|ref|XP_004048236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Gorilla gorilla gorilla]
gi|48429097|sp|P61980.1|HNRPK_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=dC stretch-binding protein;
Short=CSBP
gi|48429103|sp|P61978.1|HNRPK_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=Transformation up-regulated
nuclear protein; Short=TUNP
gi|48429104|sp|P61979.1|HNRPK_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|241478|gb|AAB20770.1| heterogeneous nuclear ribonucleoprotein complex K [Homo sapiens]
gi|409389|dbj|BAA04566.1| dC-stretch binding protein [Rattus norvegicus]
gi|12847547|dbj|BAB27614.1| unnamed protein product [Mus musculus]
gi|15929044|gb|AAH14980.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|119583079|gb|EAW62675.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Homo
sapiens]
gi|148709316|gb|EDL41262.1| mCG6893, isoform CRA_a [Mus musculus]
gi|149039793|gb|EDL93909.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Rattus
norvegicus]
gi|380812324|gb|AFE78036.1| heterogeneous nuclear ribonucleoprotein K isoform b [Macaca
mulatta]
gi|410337441|gb|JAA37667.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401355|gb|JAA47567.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 463
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|348530804|ref|XP_003452900.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 685
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
S T SV S+ G IIG+GG +I +++G K+ I RN+ L G+ + I++
Sbjct: 117 STTEDYSVPDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPERNVSLTGTQDSIQK 176
Query: 224 ASAMVRELIVR 234
A ++ E++ R
Sbjct: 177 AKRLLNEIVSR 187
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ A G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 416 SIPAQKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQ 475
Query: 227 MVRELI 232
++ E I
Sbjct: 476 LIEEKI 481
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 147 GRYEPPPAPGPAASFGAS-ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRDHE 204
GR PP + +S G + A ++ + A AG +IGKGG KQ+ + G K+ I+D
Sbjct: 188 GRGTPPLSSYHDSSNGQNGAVHEMMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDAS 247
Query: 205 ADPNL-RNIELEGSFEQIKQASAMVRELI 232
PN+ + + + G +++QA MV+E++
Sbjct: 248 QGPNVDKPLRIIGDPYKVQQAQEMVQEIL 276
>gi|343428331|emb|CBQ71861.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 369
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT++C N+ KG C + DRC FAHG +ELR
Sbjct: 321 YKTEMCRNWEEKGYCFYKDRCQFAHGPSELR 351
>gi|224138948|ref|XP_002326730.1| predicted protein [Populus trichocarpa]
gi|222834052|gb|EEE72529.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
SN+KT++C + G C FG++CHFAHG EL +
Sbjct: 250 SNWKTRICNKWELTGYCPFGNKCHFAHGVGELHR 283
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL----GKPIAISHDDPRAFGAVPGRMGG 147
P+ K+R+CN+ C FG+KCHFAHG EL G + + D AF V + GG
Sbjct: 249 PSNWKTRICNKWELTGYCPFGNKCHFAHGVGELHRYGGGLVEMDAKD-SAFVPVESKQGG 307
Query: 148 RYEPPPAPGPAASFGASATAKISVDASLAGA 178
P+ P + AS T+ + D G
Sbjct: 308 V----PSKTPPETVVASVTSVPNSDVYHLGV 334
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAH ELR+
Sbjct: 91 FKTKLCCKFRAGTCPYITNCNFAHSMEELRR 121
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYF------PGGYNAVAQMMNLPQAVPAPSRN-MAVP 85
K+K C KF CP+ +C+F H P + + + +R +P
Sbjct: 92 KTKLCCKF-RAGTCPYITNCNFAHSMEELRRPPPNWQEIVAAHEEERGNTVDAREEFQIP 150
Query: 86 PPASNGPTVVKS---RMCNRLNSAEGCKFGDKCHFAHGE 121
G +S R C + + EGC +GD C F H E
Sbjct: 151 SIVGFGAETQRSYKGRHCKKFYTEEGCPYGDNCTFLHDE 189
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 26 SESGVGSKSKPCTKFFSTAGCPFGESCHFLH 56
+E+ K + C KF++ GCP+G++C FLH
Sbjct: 157 AETQRSYKGRHCKKFYTEEGCPYGDNCTFLH 187
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|355753438|gb|EHH57484.1| hypothetical protein EGM_07121 [Macaca fascicularis]
Length = 464
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|354500000|ref|XP_003512091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Cricetulus griseus]
Length = 463
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|194376532|dbj|BAG57412.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 356 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 415
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 416 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 447
>gi|119583080|gb|EAW62676.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Homo
sapiens]
Length = 462
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 384 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 443
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 444 QNAQYLLQ 451
>gi|118344116|ref|NP_001071879.1| zinc finger protein [Ciona intestinalis]
gi|70571730|dbj|BAE06810.1| zinc finger protein [Ciona intestinalis]
Length = 380
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
+S +KT+LC F + G C +GD+C FAHG ELR+
Sbjct: 128 TSRYKTELCRPFEENGKCKYGDKCQFAHGKHELRR 162
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F C +G+ C F H G + + +M+ P+
Sbjct: 132 KTELCRPFEENGKCKYGDKCQFAH----GKHELRRMVRHPK------------------- 168
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDP---RAFGAVPGRMGGR 148
K+ +C +++ C +G +CHF H + ++G IA P ++ +VP ++ R
Sbjct: 169 --YKTELCRTYHTSGFCPYGPRCHFIHNQEDVG--IAKKQTQPTRIQSQTSVPVKINNR 223
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
+ T ++ V S AIIGKGG KQ+ TG K+ I + E N R I + GSF+ ++
Sbjct: 109 TYTCRVVVPKSAVSAIIGKGGHQIKQLQNNTGTKIQISNREDGLNERIISIVGSFDSVRD 168
Query: 224 ASAMV 228
+ V
Sbjct: 169 TTTKV 173
>gi|270005438|gb|EFA01886.1| hypothetical protein TcasGA2_TC007496 [Tribolium castaneum]
Length = 213
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC + + G C +GD+C FAHG AELR A
Sbjct: 57 TSRYKTELCRPYEEFGVCKYGDKCQFAHGGAELRSLA 93
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 131 SHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQI 190
++D A G + GR R EP A G S T ++ + S G+I+G GGVN +I
Sbjct: 653 AYDYTEAAGQIHGREDYR-EPTSATGRFLS-----TIELRIPNSSLGSIVGAGGVNLAEI 706
Query: 191 CRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
+ +GA+L + + A + +E++G+ +Q K A ++++ I
Sbjct: 707 RQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFI 748
>gi|321264742|ref|XP_003197088.1| hypothetical protein CGB_L2110C [Cryptococcus gattii WM276]
gi|317463566|gb|ADV25301.1| hypothetical protein CNBL1730 [Cryptococcus gattii WM276]
Length = 884
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 18/104 (17%)
Query: 19 FKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAP 78
F+ +K G +++PC KFF+ CP G+ C F+H +P + P P
Sbjct: 675 FENTKRRKPKGY-YRTRPC-KFFAEGHCPHGKECTFIHI-------------IPASSPEP 719
Query: 79 SRNMAVPPPASNGPTVVKSRM---CNRLNSAEGCKFGDKCHFAH 119
+ P T R C NSA GC GD C F H
Sbjct: 720 LSSSDSDPANYKSKTQSNKRKTLPCKFFNSAAGCNAGDDCAFLH 763
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 8 KPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQ 67
+P + +++ KSK +S K+ PC F S AGC G+ C FLH
Sbjct: 718 EPLSSSDSDPANYKSKTQSNK---RKTLPCKFFNSAAGCNAGDDCAFLH----------- 763
Query: 68 MMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+P++VP +A P P P C C GD CHFAH
Sbjct: 764 TRVVPESVPL----VAKPRPWRTKP-------CRHYQLGR-CMLGDVCHFAH 803
>gi|126330639|ref|XP_001363707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
gi|395515329|ref|XP_003761858.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Sarcophilus
harrisii]
Length = 471
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 392 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 451
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 452 QNAQYLLQ 459
>gi|119583083|gb|EAW62679.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_e [Homo
sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 339 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 398
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 399 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 430
>gi|74177637|dbj|BAE38921.1| unnamed protein product [Mus musculus]
Length = 464
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|392571357|gb|EIW64529.1| hypothetical protein TRAVEDRAFT_139454 [Trametes versicolor
FP-101664 SS1]
Length = 761
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KGSC +G +C FAHG ELRK
Sbjct: 447 YKTELCRSWEEKGSCRYGAKCQFAHGEDELRK 478
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 351 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 410
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 411 QNAQYLLQ 418
>gi|45361501|ref|NP_989327.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
gi|39794355|gb|AAH64170.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + + R I + G+ +QI
Sbjct: 318 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQI 377
Query: 222 KQASAMVRELIVRIGPAHA 240
+ A +++ + + +A
Sbjct: 378 QNAQFLLQNSVKQFSEDYA 396
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
+ T ++ V S AIIGKGG KQ+ TG K+ I + E N R I + GSF+ ++
Sbjct: 109 TYTCRVVVPKSAVSAIIGKGGHQIKQLQNNTGTKIQISNREDGLNERIISIVGSFDSVRD 168
Query: 224 ASAMV 228
+ V
Sbjct: 169 TTTKV 173
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
+T ++ + S G+I+G GGVN +I + +GA+L + + A + +E++G+ +Q K A
Sbjct: 421 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 480
Query: 225 SAMVRELI 232
++++ I
Sbjct: 481 QSLLQGFI 488
>gi|345329393|ref|XP_001506808.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ornithorhynchus anatinus]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|77736071|ref|NP_001029734.1| heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|426219903|ref|XP_004004157.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Ovis aries]
gi|426219905|ref|XP_004004158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ovis aries]
gi|426224282|ref|XP_004006301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
gi|426256846|ref|XP_004022048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Ovis aries]
gi|108860777|sp|Q3T0D0.1|HNRPK_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|74354615|gb|AAI02451.1| Heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|296484523|tpg|DAA26638.1| TPA: heterogeneous nuclear ribonucleoprotein K [Bos taurus]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|89272931|emb|CAJ83219.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 376
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + + R I + G+ +QI
Sbjct: 295 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQI 354
Query: 222 KQASAMVRELIVRIGPAHA 240
+ A +++ + + +A
Sbjct: 355 QNAQFLLQNSVKQFSEDYA 373
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 363 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 422
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 423 QNAQYLLQ 430
>gi|51870092|ref|YP_073645.1| hypothetical protein LDVICp139 [Lymphocystis disease virus -
isolate China]
gi|51858300|gb|AAU10984.1| hypothetical protein [Lymphocystis disease virus - isolate China]
Length = 350
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 30 VGSKSKPCTKFFSTAGCPFG-ESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPA 88
V SKPC CPFG E CH H P + + P P +N +
Sbjct: 150 VQKSSKPCKYLVEGQKCPFGPEKCHHNHGPPPTEKKHQLCKYVKEDKPCPFKNYCL---- 205
Query: 89 SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+ K R+C + + C F DKC + H
Sbjct: 206 YQHEIIQKDRLCKYYKNQQPCPFKDKCMYKH 236
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 420
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 421 QNAQYLLQ 428
>gi|426219907|ref|XP_004004159.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Ovis aries]
Length = 439
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|61369343|gb|AAX43320.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
Length = 465
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|72010393|ref|XP_782811.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like isoform
2 [Strongylocentrotus purpuratus]
Length = 386
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC + + G+C +GD+C FAHG ELR
Sbjct: 115 SSRYKTELCRPYEENGTCKYGDKCQFAHGIHELR 148
>gi|392513715|ref|NP_001254774.1| heterogeneous nuclear ribonucleoprotein K [Sus scrofa]
Length = 463
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|347659013|ref|NP_001231630.1| zinc finger protein 36, C3H1 type-like 1 isoform 2 [Homo sapiens]
Length = 407
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 181 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 214
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 337 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 396
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 397 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 428
>gi|147903924|ref|NP_001080563.1| heterogeneous nuclear ribonucleoprotein K [Xenopus laevis]
gi|27882469|gb|AAH44711.1| Hnrpk protein [Xenopus laevis]
Length = 399
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + + R I + G+ +QI
Sbjct: 318 GPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQI 377
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 378 QNAQFLLQ 385
>gi|59381084|gb|AAW84289.1| heterogeneous nuclear ribonucleoprotein K transcript variant [Homo
sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|281337729|gb|EFB13313.1| hypothetical protein PANDA_003005 [Ailuropoda melanoleuca]
Length = 453
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
+ T +I V S AIIGKGG KQ+ +TG K+ + + E R I + GSF IK
Sbjct: 106 TYTCRIVVPKSAVSAIIGKGGYQIKQLQNKTGTKIQVSNRECGLYERIITIVGSFASIKD 165
Query: 224 ASAMVRELI 232
+ V E I
Sbjct: 166 TATKVIEAI 174
>gi|397575054|gb|EJK49508.1| hypothetical protein THAOC_31608 [Thalassiosira oceanica]
Length = 744
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTAI 290
S +K++LC FA+ G C FG RC+FAHG ELR +
Sbjct: 176 SKYKSELCSWFARFGRCKFGARCNFAHGEGELRSRTL 212
>gi|348578485|ref|XP_003475013.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Cavia
porcellus]
Length = 338
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 235 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 294
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 295 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 326
>gi|41054479|ref|NP_955943.1| zinc finger protein 36, C3H type-like 1b [Danio rerio]
gi|39645454|gb|AAH63991.1| Zinc finger protein 36, C3H type-like 1 like [Danio rerio]
Length = 348
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 135 SSRYKTELCRPFEENGTCKYGDKCQFAHGMHELR 168
>gi|449467473|ref|XP_004151447.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Cucumis sativus]
gi|449521453|ref|XP_004167744.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Cucumis sativus]
Length = 351
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + GSC +GD C FAHG ELR
Sbjct: 263 FKTELCNKWQETGSCPYGDHCQFAHGIEELR 293
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 167 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASA 226
++S+ LAGAIIGKGG +QI +++GA ++I + R I + GS +QI+ A
Sbjct: 326 TQVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQY 385
Query: 227 MVR 229
+++
Sbjct: 386 LLQ 388
>gi|354499998|ref|XP_003512090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Cricetulus griseus]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQ 220
+ + K+ V G +IGKGG + + +GAK+ I RD +ADP+ R +EL G+
Sbjct: 199 TTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSS 258
Query: 221 IKQASAMVRELIVR 234
I +A ++ +I
Sbjct: 259 ISKAEKLINAVIAE 272
>gi|50307627|ref|XP_453793.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642927|emb|CAH00889.1| KLLA0D16610p [Kluyveromyces lactis]
Length = 310
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +FA KG+C +G++C FAHG EL+
Sbjct: 209 YKTELCESFATKGTCKYGNKCQFAHGLHELK 239
>gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|14165439|ref|NP_002131.2| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197101649|ref|NP_001126766.1| heterogeneous nuclear ribonucleoprotein K [Pongo abelii]
gi|388454448|ref|NP_001253875.1| heterogeneous nuclear ribonucleoprotein K [Macaca mulatta]
gi|114625208|ref|XP_001155079.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 18
[Pan troglodytes]
gi|114625210|ref|XP_001155315.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 22
[Pan troglodytes]
gi|149758457|ref|XP_001489114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Equus caballus]
gi|296189573|ref|XP_002742828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Callithrix jacchus]
gi|296189575|ref|XP_002742829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Callithrix jacchus]
gi|296189579|ref|XP_002742831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Callithrix jacchus]
gi|301758414|ref|XP_002915066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Ailuropoda melanoleuca]
gi|332236647|ref|XP_003267511.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Nomascus leucogenys]
gi|332236651|ref|XP_003267513.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Nomascus leucogenys]
gi|344272026|ref|XP_003407837.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Loxodonta africana]
gi|395819298|ref|XP_003783031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Otolemur
garnettii]
gi|397475599|ref|XP_003809221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1 [Pan
paniscus]
gi|397475603|ref|XP_003809223.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3 [Pan
paniscus]
gi|397475609|ref|XP_003809226.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6 [Pan
paniscus]
gi|402897753|ref|XP_003911909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Papio anubis]
gi|402897755|ref|XP_003911910.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Papio anubis]
gi|402897761|ref|XP_003911913.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Papio anubis]
gi|403300938|ref|XP_003941169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Saimiri boliviensis boliviensis]
gi|403300942|ref|XP_003941171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Saimiri boliviensis boliviensis]
gi|403300944|ref|XP_003941172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Saimiri boliviensis boliviensis]
gi|410978211|ref|XP_003995489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Felis catus]
gi|410978213|ref|XP_003995490.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Felis catus]
gi|426362129|ref|XP_004048233.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Gorilla gorilla gorilla]
gi|426362131|ref|XP_004048234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Gorilla gorilla gorilla]
gi|75056718|sp|Q5R5H8.1|HNRPK_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|75075750|sp|Q4R4M6.1|HNRPK_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|12653175|gb|AAH00355.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|13879427|gb|AAH06694.1| Hnrpk protein [Mus musculus]
gi|26347481|dbj|BAC37389.1| unnamed protein product [Mus musculus]
gi|38197650|gb|AAH61867.1| Hnrpk protein [Rattus norvegicus]
gi|48145659|emb|CAG33052.1| HNRPK [Homo sapiens]
gi|55732576|emb|CAH92988.1| hypothetical protein [Pongo abelii]
gi|58475965|gb|AAH89328.1| Hnrpk protein [Mus musculus]
gi|61359196|gb|AAX41682.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|67971214|dbj|BAE01949.1| unnamed protein product [Macaca fascicularis]
gi|74139420|dbj|BAE40851.1| unnamed protein product [Mus musculus]
gi|74141211|dbj|BAE35915.1| unnamed protein product [Mus musculus]
gi|74178242|dbj|BAE29905.1| unnamed protein product [Mus musculus]
gi|74183280|dbj|BAE22563.1| unnamed protein product [Mus musculus]
gi|74185026|dbj|BAE39121.1| unnamed protein product [Mus musculus]
gi|119583081|gb|EAW62677.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo
sapiens]
gi|123979648|gb|ABM81653.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|123994453|gb|ABM84828.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|158256108|dbj|BAF84025.1| unnamed protein product [Homo sapiens]
gi|197692227|dbj|BAG70077.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197692481|dbj|BAG70204.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|351696771|gb|EHA99689.1| Heterogeneous nuclear ribonucleoprotein K [Heterocephalus glaber]
gi|380812328|gb|AFE78038.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|380812330|gb|AFE78039.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|410337439|gb|JAA37666.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401379|gb|JAA47578.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|397507282|ref|XP_003824130.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1 [Pan
paniscus]
Length = 407
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 181 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 214
>gi|393911422|gb|EJD76298.1| KH domain-containing protein [Loa loa]
Length = 632
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN---IELEGSFEQIKQA 224
+I+V + L G IIGKGG N +++ R TGA++ I D D + + + G+F+ +
Sbjct: 537 EIAVPSRLVGRIIGKGGQNVRELQRMTGAQVKIPDDTGDDETQKATIVRVLGNFQSSQAV 596
Query: 225 SAMVRELI------VRIGPAHAKNPAT 245
A + +LI + IGP + ++ ++
Sbjct: 597 QARLSQLINDFSQRLNIGPTNGQSTSS 623
>gi|440905354|gb|ELR55741.1| Heterogeneous nuclear ribonucleoprotein K [Bos grunniens mutus]
Length = 464
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 361 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIHHESGAS 420
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + R I + G+ +QI+ A +++
Sbjct: 421 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 452
>gi|380812326|gb|AFE78037.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
Length = 459
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 380 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 439
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 440 QNAQYLLQ 447
>gi|312075256|ref|XP_003140336.1| hypothetical protein LOAG_04751 [Loa loa]
gi|307764497|gb|EFO23731.1| hypothetical protein LOAG_04751 [Loa loa]
Length = 349
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 255 SNFKTKLCGNFAKGSCTFGDRCHFAH 280
+N++TKLC NF G C +GDRC F H
Sbjct: 223 NNYRTKLCTNFKNGHCRYGDRCRFIH 248
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 147 GRYEPPPAP---GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH 203
GR PP AP A + T + V S A A+IG G + I R +GA +SI+
Sbjct: 361 GRDAPPSAPPGNQNQAHGSSQVTHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQ-- 418
Query: 204 EADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
E P +E+ GS Q++ A +++ + P + P G P+ + +
Sbjct: 419 EGAPGEMTVEITGSASQVQTAQQLIKNFMAEASP---QGPPAPGPHGQPVDTGY 469
>gi|355689343|gb|AER98802.1| far upstream element binding protein 1 [Mustela putorius furo]
Length = 593
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 387 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|145517073|ref|XP_001444425.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411836|emb|CAK77028.1| unnamed protein product [Paramecium tetraurelia]
Length = 263
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT +C +F G+C+ G++C FAHG ELR
Sbjct: 69 YKTSICRHFELGNCSIGEKCQFAHGQKELR 98
>gi|393247884|gb|EJD55391.1| hypothetical protein AURDEDRAFT_109731 [Auricularia delicata
TFB-10046 SS5]
Length = 723
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KGSC +G +C FAHG ELRK
Sbjct: 390 YKTELCRSWEEKGSCRYGPKCQFAHGEDELRK 421
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ K+ +C C++G KC FAHGE EL K
Sbjct: 389 LYKTELCRSWEEKGSCRYGPKCQFAHGEDELRK 421
>gi|146091310|ref|XP_001466496.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017368|ref|XP_003861871.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070858|emb|CAM69217.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500099|emb|CBZ35174.1| hypothetical protein, conserved [Leishmania donovani]
Length = 151
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+ K+K+C + K G+C +GDRC FAHGA ELR A
Sbjct: 105 TKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPA 140
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDD 134
T +KS+MC C +GD+C FAHG EL P + +D
Sbjct: 105 TKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPASQPRND 146
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARH 419
Query: 227 MVRELIVRIGPAHAKNPATAGSA------AHPLSSNFKTKLCGNF 265
++ E ++G P T G + A P + F + G F
Sbjct: 420 LIDE---KVGGTSLGAPGTYGQSPFSQPPAAPHQNTFPPRSSGCF 461
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 143 GRMGGRYE-------------PPPAPGPAASF----GASATAKISVDASLAGAIIGKGGV 185
GR G RYE P G S+ G T ++++ LAG+IIGKGG
Sbjct: 317 GRPGDRYESMSGGGYDNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQ 376
Query: 186 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
KQI ++GA + I + R I + G+ +QI+ A +++
Sbjct: 377 RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 420
>gi|395504153|ref|XP_003756421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sarcophilus
harrisii]
Length = 338
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 113 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 146
>gi|75765942|pdb|1ZZI|A Chain A, Crystal Structure Analysis Of The Third Kh Domain Of Hnrnp
K In Complex With Ssdna
gi|75765943|pdb|1ZZI|B Chain B, Crystal Structure Analysis Of The Third Kh Domain Of Hnrnp
K In Complex With Ssdna
gi|75765946|pdb|1ZZJ|A Chain A, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765947|pdb|1ZZJ|B Chain B, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765948|pdb|1ZZJ|C Chain C, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765950|pdb|1ZZK|A Chain A, Crystal Structure Of The Third Kh Domain Of Hnrnp K At
0.95a Resolution
Length = 82
Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 159 ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSF 218
+ G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+
Sbjct: 1 GAMGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 60
Query: 219 EQIKQASAMVR 229
+QI+ A +++
Sbjct: 61 DQIQNAQYLLQ 71
>gi|255553099|ref|XP_002517592.1| conserved hypothetical protein [Ricinus communis]
gi|223543224|gb|EEF44756.1| conserved hypothetical protein [Ricinus communis]
Length = 185
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 253 LSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
++ NFKT+LC F G C +G++C FAHG E+R
Sbjct: 9 MNGNFKTQLCSKFRFGHCRYGNKCFFAHGNHEVR 42
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 34 SKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQ---MMNLPQAVPAPSRNMAVPPP--- 87
S C F+ C +G+ C FLH P N++ + ++ SR ++
Sbjct: 74 SNVCKMFYFRQECTYGDKCKFLHGVPD--NSMKRGSGYCRENSSISIKSRGISGDNRSGF 131
Query: 88 ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
AS P + K R+CN+ C +G C FAHG
Sbjct: 132 ASLKPVIKKYRLCNKWKMTGSCPYGKMCCFAHG 164
>gi|205687188|sp|A2ZVY5.1|C3H9_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 9;
Short=OsC3H9
gi|125527040|gb|EAY75154.1| hypothetical protein OsI_03048 [Oryza sativa Indica Group]
gi|125571367|gb|EAZ12882.1| hypothetical protein OsJ_02803 [Oryza sativa Japonica Group]
Length = 333
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 236 GPAHAKNPATAGSAAHPLSSN-FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
G PA +G+ + FKT+LC + + G C +GD+C FAHG ELR
Sbjct: 237 GDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELR 289
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 25/88 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 260 KTELCNKWEETGDCPYGDQCQFAH----GVTELRPVIRHPR------------------- 296
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+ +C + + + C +G +CHF H
Sbjct: 297 --YKTAVCRMVLAGDVCPYGHRCHFRHS 322
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
+I V S+ G +IG+GG K+I +TGAK+ + + R + G ++++ AS M
Sbjct: 323 EIPVPRSMVGVVIGRGGEMIKKIQAETGAKVQFKTDDGQGPNRMCTINGPQDKVQNASCM 382
Query: 228 VRELI 232
+RELI
Sbjct: 383 IRELI 387
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN--IELEGSFEQIKQASAM 227
+V A G +IGKGG ++I RQ+GA + + H++ N R+ +++G+ +QI+ A +
Sbjct: 443 AVPAEKCGLVIGKGGETIREINRQSGAHVELDRHQSQSNSRDRVFKIQGNADQIQSAIRL 502
Query: 228 VRE 230
+ +
Sbjct: 503 ISD 505
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 116 HFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASL 175
H H E ++ +P + DP G +G P T + V S
Sbjct: 288 HETHFEHKISQPGFSLYGDPGLVGLRSTGLGRATAP---------IVTQVTQTMQVPLSY 338
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
A IIG G N I R +GA LSI++ P+ +E++G+ Q++ A +++E I
Sbjct: 339 AEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQEFI 395
>gi|302842622|ref|XP_002952854.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
gi|300261894|gb|EFJ46104.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
Length = 336
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNL--RNIELEGSFEQI 221
AK+ V S+AG++IGK G N +Q+ R +GA++ + R E P R + L GS +
Sbjct: 42 VVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAV 101
Query: 222 KQASAMVRELIVRIGPAH---------AKNPATAGSAAHPLSSNFKTKLCG 263
A ++ E I R A AK P AG A L+ +LCG
Sbjct: 102 LTAIFLILEKISRDANASASSNGVKRGAKKPEEAGQAQVKLA--LSRRLCG 150
>gi|115438841|ref|NP_001043700.1| Os01g0645000 [Oryza sativa Japonica Group]
gi|113533231|dbj|BAF05614.1| Os01g0645000, partial [Oryza sativa Japonica Group]
Length = 339
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 236 GPAHAKNPATAGSAAHPLSSN-FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
G PA +G+ + FKT+LC + + G C +GD+C FAHG ELR
Sbjct: 243 GDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELR 295
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 25/88 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 266 KTELCNKWEETGDCPYGDQCQFAH----GVTELRPVIRHPR------------------- 302
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+ +C + + + C +G +CHF H
Sbjct: 303 --YKTAVCRMVLAGDVCPYGHRCHFRHS 328
>gi|354548255|emb|CCE44992.1| hypothetical protein CPAR2_407950 [Candida parapsilosis]
Length = 265
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LCG F K GSC +G +C FAHG AEL+
Sbjct: 201 YKTELCGPFMKTGSCPYGLKCQFAHGEAELK 231
>gi|326510811|dbj|BAJ91753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD+C FAHG +ELR
Sbjct: 264 FKTELCNKWEETGACPYGDQCQFAHGVSELR 294
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + + ++ P+
Sbjct: 265 KTELCNKWEETGACPYGDQCQFAH----GVSELRPVIRHPR------------------- 301
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+ +C + + E C +G +CHF H
Sbjct: 302 --YKTEVCRMVLNGEVCPYGHRCHFRH 326
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 126 KPIAISHDDPRAFGA---VPGRMGGRYEPPPAP-GPAASFGAS----ATAKISVDASLAG 177
KP+ I+ D + A V + R + PP G SFG S + ++ V + G
Sbjct: 174 KPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGISGGQRSIGEVIVPRASVG 233
Query: 178 AIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
IIGKGG K++ ++GAK+ + D + R ++G+ EQI +A+ + EL+ + G
Sbjct: 234 MIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELVKKSG 293
Query: 237 PA 238
A
Sbjct: 294 AA 295
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 235
G +IG+GG QI QT ++ + N+R L+GS + +A AM+ E+I R
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 236 G 236
G
Sbjct: 104 G 104
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 130 ISHDDPRA-FGAVPGRMGGRYEPPP------APGPAASFGASATAKISVDASLAGAIIGK 182
+S D RA V R G R PPP G G T ++ + + G +IGK
Sbjct: 87 MSVDRARAMINEVIARAGNR--PPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGK 144
Query: 183 GGVNSKQICRQTGAKLSI--RDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GG K I QTG K+ + + E+ + + + G E+++ A MV E++
Sbjct: 145 GGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEEIL 196
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 353 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 412
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 413 QNAQYLLQ 420
>gi|365990802|ref|XP_003672230.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
gi|343771005|emb|CCD26987.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
Length = 411
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG+C +G++C FAHG EL+
Sbjct: 288 YKTELCESFTTKGTCKYGNKCQFAHGLHELK 318
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHG 281
S+NF+TK C N+AK G C +G RC F HG
Sbjct: 323 SNNFRTKPCVNWAKLGYCPYGKRCCFKHG 351
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 349 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 408
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 409 QNAQYLLQ 416
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 135 PRAFGAVPGRMGGRYEPPPAPGPAASFGASATAK-------ISVDASLAGAIIGKGGVNS 187
PRA+ VP R+ G+Y P A G G S+ + I V A+ G IIGKGG
Sbjct: 349 PRAW--VP-RVPGQYIPRAAGG----LGGSSILQPGHKHMEIDVPANKCGLIIGKGGETL 401
Query: 188 KQICRQTGAKLSIRDHEADPN-LRNIELEGSFEQIKQASAMVRELI 232
K + +TG + I+ + D + R L G+ EQI +A +RE +
Sbjct: 402 KYMHTETGINIEIKRNVPDSSPFRTFNLRGTDEQISKAETFIREKV 447
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 348 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 407
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 408 QNAQYLLQ 415
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|281349381|gb|EFB24965.1| hypothetical protein PANDA_005238 [Ailuropoda melanoleuca]
Length = 320
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 94 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 127
>gi|194377356|dbj|BAG57626.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +QI+ A
Sbjct: 273 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 332
Query: 227 MVRELI 232
++ E +
Sbjct: 333 LIDEKV 338
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 73 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 129
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 130 DPFKVQQAREMVLEII 145
>gi|351714712|gb|EHB17631.1| Butyrate response factor 1 [Heterocephalus glaber]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|149039051|gb|EDL93271.1| rCG45587 [Rattus norvegicus]
Length = 569
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|155372187|ref|NP_001094704.1| zinc finger protein 36, C3H1 type-like 1 [Bos taurus]
gi|154425731|gb|AAI51441.1| ZFP36L1 protein [Bos taurus]
gi|296482999|tpg|DAA25114.1| TPA: butyrate response factor 1 [Bos taurus]
gi|440897352|gb|ELR49063.1| Zinc finger protein 36, C3H1 type-like 1 [Bos grunniens mutus]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|73963334|ref|XP_853070.1| PREDICTED: zinc finger protein 36, C3H type-like 1 isoform 3 [Canis
lupus familiaris]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|417399200|gb|JAA46628.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 126 KPIAISHDDPRAFGA---VPGRMGGRYEPPPAP-GPAASFGAS----ATAKISVDASLAG 177
KP+ I+ D + A V + R + PP G SFG S + ++ V + G
Sbjct: 176 KPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGISGGQRSIGEVIVPRASVG 235
Query: 178 AIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
IIGKGG K++ ++GAK+ + D + R ++G+ EQI +A+ + EL+ + G
Sbjct: 236 MIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELVKKSG 295
Query: 237 PA 238
A
Sbjct: 296 AA 297
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
G +IG+GG QI QT ++ + N+R L+GS + +A AM+ E+I R G
Sbjct: 47 GNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARAG 106
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 130 ISHDDPRA-FGAVPGRMGGRYEPPP------APGPAASFGASATAKISVDASLAGAIIGK 182
+S D RA V R G R PPP G G T ++ + + G +IGK
Sbjct: 89 MSVDRARAMINEVIARAGNR--PPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGK 146
Query: 183 GGVNSKQICRQTGAKLSI--RDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
GG K I QTG K+ + + E+ + + + G E+++ A MV E++
Sbjct: 147 GGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEEIL 198
>gi|54695804|gb|AAV38274.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|61366592|gb|AAX42880.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI+ A
Sbjct: 363 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 422
Query: 226 AMVR 229
+++
Sbjct: 423 YLLQ 426
>gi|149737318|ref|XP_001500199.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Equus
caballus]
Length = 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|355730146|gb|AES10103.1| zinc finger protein 36, C3H type-like 1 [Mustela putorius furo]
Length = 339
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 351 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 410
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 411 QNAQYLLQ 418
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T + V S A A+IG GVN + R +GA ++I + + P +E+ GS Q++ A
Sbjct: 734 TQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQ 793
Query: 226 AMVRELI 232
+++ +
Sbjct: 794 QLIQNFM 800
>gi|301763295|ref|XP_002917068.1| PREDICTED: butyrate response factor 1-like [Ailuropoda melanoleuca]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|296215346|ref|XP_002754086.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Callithrix
jacchus]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|291406477|ref|XP_002719590.1| PREDICTED: butyrate response factor 1 [Oryctolagus cuniculus]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +Q++ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARH 419
Query: 227 MVRELIVRIGPAHAKNPATAGSA 249
++ E ++G A PA G +
Sbjct: 420 LIDE---KVGGASLGAPAAFGQS 439
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|332228957|ref|XP_003263654.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Nomascus leucogenys]
gi|441595135|ref|XP_004087218.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Nomascus
leucogenys]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|335292719|ref|XP_003356787.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sus scrofa]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|256085879|ref|XP_002579138.1| acetyl-CoA carboxylase; methylcrotonyl-CoA carboxylase [Schistosoma
mansoni]
Length = 1189
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 38/123 (30%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESES--GVGSKSKPCTKFFSTAG--CPFGESCHFLH 56
+D +K K +++NG SKH+++S + K++ C K+F G CP G CHF H
Sbjct: 1061 VDMKKSNK----VSSNG----SKHKNDSLFNIRYKTQVC-KYFQEHGGYCPVGVKCHFAH 1111
Query: 57 YFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCH 116
+ ++ + P++ P +S++C ++ C +GDKC+
Sbjct: 1112 -------GIEELRD-PKSHPK-----------------FRSQICRNYSTTGNCSYGDKCY 1146
Query: 117 FAH 119
F H
Sbjct: 1147 FKH 1149
>gi|115465601|ref|NP_001056400.1| Os05g0576300 [Oryza sativa Japonica Group]
gi|75261604|sp|Q6L5G1.1|C3H39_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 39;
Short=OsC3H39
gi|47900276|gb|AAT39144.1| unknown protein, contains zinc finger domains [Oryza sativa
Japonica Group]
gi|50080264|gb|AAT69599.1| unknown protein, contains zinc finger domain, PF00642 [Oryza sativa
Japonica Group]
gi|113579951|dbj|BAF18314.1| Os05g0576300 [Oryza sativa Japonica Group]
gi|215741196|dbj|BAG97691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197316|gb|EEC79743.1| hypothetical protein OsI_21099 [Oryza sativa Indica Group]
gi|222632659|gb|EEE64791.1| hypothetical protein OsJ_19647 [Oryza sativa Japonica Group]
Length = 343
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD+C FAHG AELR
Sbjct: 269 FKTELCNKWEETGACPYGDQCQFAHGVAELR 299
>gi|1480243|emb|CAA67781.1| Berg36 [Homo sapiens]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|74206095|dbj|BAE23532.1| unnamed protein product [Mus musculus]
Length = 700
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ ADPN++ + G+ +QI A ++ E I
Sbjct: 384 TGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 169 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 229 KPLR---ITGDPYKVQQAKEMVLELI 251
>gi|197097548|ref|NP_001124577.1| zinc finger protein 36, C3H1 type-like 1 [Pongo abelii]
gi|55725015|emb|CAH89375.1| hypothetical protein [Pongo abelii]
Length = 316
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 90 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 123
>gi|410962515|ref|XP_003987814.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Felis catus]
gi|410962517|ref|XP_003987815.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Felis catus]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ A G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 383 SIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQ 442
Query: 227 MVRELI 232
++ E I
Sbjct: 443 LIEEKI 448
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
++ T + V S+ G IIG+GG +I +++G K+ I R+I L GS + I+
Sbjct: 99 STMTEECRVPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLPERSISLTGSPDAIQ 158
Query: 223 QASAMVRELIVR 234
+A A++ +++ R
Sbjct: 159 RARALLDDIVSR 170
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHEADPNL-RNIELEGSFEQ 220
+S+ ++ + A AG IIGKGG KQ+ + G K+ I+D PN+ + + + G +
Sbjct: 179 SSSMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPPNIDKPLRIIGDPYK 238
Query: 221 IKQASAMVRELI 232
++QA MV E++
Sbjct: 239 VQQAKEMVNEIL 250
>gi|359324034|ref|XP_003640270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Canis lupus familiaris]
Length = 466
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQ+ ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEGSEDRVITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAPYLLQ 452
>gi|156357309|ref|XP_001624163.1| predicted protein [Nematostella vectensis]
gi|156210922|gb|EDO32063.1| predicted protein [Nematostella vectensis]
Length = 70
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS +KT+LC F + G+C +GD+C FAHG ELR+ A
Sbjct: 1 SSRYKTELCRPFEESGTCKYGDKCQFAHGYHELRQLA 37
>gi|15812180|ref|NP_004917.2| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|347659004|ref|NP_001231627.1| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|1351254|sp|Q07352.1|TISB_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-response factor 1; Short=ERF-1; AltName:
Full=Protein TIS11B
gi|825653|emb|CAA55670.1| ERF-1 [Homo sapiens]
gi|17390794|gb|AAH18340.1| Zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|54695806|gb|AAV38275.1| zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|61356812|gb|AAX41289.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|61360527|gb|AAX41874.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|119601373|gb|EAW80967.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|119601374|gb|EAW80968.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|123980892|gb|ABM82275.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|123995707|gb|ABM85455.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|168277788|dbj|BAG10872.1| butyrate response factor 1 [synthetic construct]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|395849618|ref|XP_003797418.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Otolemur garnettii]
gi|395849620|ref|XP_003797419.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Otolemur garnettii]
gi|395849622|ref|XP_003797420.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 3
[Otolemur garnettii]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|402876515|ref|XP_003902009.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Papio anubis]
gi|403264495|ref|XP_003924515.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Saimiri
boliviensis boliviensis]
gi|355693383|gb|EHH27986.1| hypothetical protein EGK_18316 [Macaca mulatta]
gi|380815918|gb|AFE79833.1| zinc finger protein 36, C3H1 type-like 1 [Macaca mulatta]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|348573284|ref|XP_003472421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Cavia
porcellus]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|344273937|ref|XP_003408775.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Loxodonta
africana]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|90075092|dbj|BAE87226.1| unnamed protein product [Macaca fascicularis]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|431904505|gb|ELK09888.1| Butyrate response factor 1 [Pteropus alecto]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|61370292|gb|AAX43470.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|448524536|ref|XP_003871522.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis Co 90-125]
gi|380353344|emb|CCG26100.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis]
Length = 293
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 206 DPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPL-------SSNFK 258
D N + I L E+I + ++ + + + A++P ++ + + P + +K
Sbjct: 176 DDNQQQIYLLD--EEIPRNGSVSNDTTITVT---AQSPTSSHTDSPPQPKTKAVNTQLYK 230
Query: 259 TKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
T+LCG F K G+C +G +C FAHG AEL+
Sbjct: 231 TELCGPFMKTGNCPYGHKCQFAHGQAELK 259
>gi|344250996|gb|EGW07100.1| Kinesin-like protein KIF27 [Cricetulus griseus]
Length = 1648
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 317 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 376
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 377 QNAQYLLQ 384
>gi|302837871|ref|XP_002950494.1| hypothetical protein VOLCADRAFT_104736 [Volvox carteri f.
nagariensis]
gi|300264043|gb|EFJ48240.1| hypothetical protein VOLCADRAFT_104736 [Volvox carteri f.
nagariensis]
Length = 907
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
+ + + G+++GK G K I +++GA + + D + ++ + + GS EQ+K A A V
Sbjct: 306 VEIYPEMVGSVLGKAGATIKVIRQKSGAHVRVEDLQPGERMQLVMIHGSIEQVKTAYAEV 365
Query: 229 RELIVRIGPAHAK 241
+ +I R PA K
Sbjct: 366 KGIIDRFDPAKVK 378
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
++ + LAG +IG GG N + R++ K+ + + + +EL G+ +QI A A
Sbjct: 223 EVVLSKRLAGVLIGTGGSNVSLVRRESRCKVHVSEVRGPEQTQTVELTGTEKQISNAVAS 282
Query: 228 VRELIVRIGPAH 239
+R ++ P H
Sbjct: 283 IRRILTEFDPEH 294
>gi|390369889|ref|XP_003731728.1| PREDICTED: uncharacterized protein LOC752477, partial
[Strongylocentrotus purpuratus]
Length = 215
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 218 FEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCH 277
FEQ +Q + E V++ + A A H K+C F KG+C FGD C
Sbjct: 75 FEQARQDQLSILEKHVKMKEQEKPDGAAAARGNH--------KMCYKFQKGNCRFGDTCK 126
Query: 278 FAHGA 282
F+HG+
Sbjct: 127 FSHGS 131
>gi|193785835|dbj|BAG51270.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|229596656|ref|XP_001007937.3| zinc finger protein [Tetrahymena thermophila]
gi|225565181|gb|EAR87692.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 309
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 232 IVRIGPAHAKN--PATAGSAAH-----PLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAA 283
I +I P A P+T S+A P + +KT++C N+ + G C +GD+C FAHG
Sbjct: 147 IQKIAPKIATTTVPSTNASSAASTNVIPEEAKYKTEMCKNWVENGKCNYGDKCKFAHGKN 206
Query: 284 EL 285
EL
Sbjct: 207 EL 208
>gi|37078458|sp|Q91WJ8.1|FUBP1_MOUSE RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|15928578|gb|AAH14763.1| Fubp1 protein [Mus musculus]
gi|148679986|gb|EDL11933.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Mus
musculus]
Length = 651
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ ADPN++ + G+ +QI A ++ E I
Sbjct: 385 GLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 169 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 229 KPLR---ITGDPYKVQQAKEMVLELI 251
>gi|207080074|ref|NP_001128956.1| DKFZP469G0620 protein [Pongo abelii]
gi|55732554|emb|CAH92977.1| hypothetical protein [Pongo abelii]
Length = 338
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|6680808|ref|NP_031590.1| zinc finger protein 36, C3H1 type-like 1 [Mus musculus]
gi|135863|sp|P23950.1|TISB_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName: Full=Protein
TIS11B
gi|202065|gb|AAA72948.1| TIS11 primary response gene [Mus musculus]
gi|26331836|dbj|BAC29648.1| unnamed protein product [Mus musculus]
gi|26341688|dbj|BAC34506.1| unnamed protein product [Mus musculus]
gi|148670707|gb|EDL02654.1| zinc finger protein 36, C3H type-like 1 [Mus musculus]
Length = 338
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|8392999|ref|NP_058868.1| zinc finger protein 36, C3H1 type-like 1 [Rattus norvegicus]
gi|135864|sp|P17431.1|TISB_RAT RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-inducible protein CMG1; AltName: Full=Protein
TIS11B
gi|55961|emb|CAA36826.1| unnamed protein product [Rattus norvegicus]
Length = 338
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|74198585|dbj|BAE39771.1| unnamed protein product [Mus musculus]
Length = 654
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ ADPN++ + G+ +QI A ++ E I
Sbjct: 385 GLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 169 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 229 KPLR---ITGDPYKVQQAKEMVLELI 251
>gi|242080663|ref|XP_002445100.1| hypothetical protein SORBIDRAFT_07g004080 [Sorghum bicolor]
gi|241941450|gb|EES14595.1| hypothetical protein SORBIDRAFT_07g004080 [Sorghum bicolor]
Length = 237
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKTKLC F G+C + C+FAHG ELRK
Sbjct: 103 FKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 133
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +Q++ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARH 419
Query: 227 MVRELIVRIGPAHAKNPATAGSA 249
++ E ++G A PA G +
Sbjct: 420 LIDE---KVGGASLGAPAAFGQS 439
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|397507284|ref|XP_003824131.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2 [Pan
paniscus]
Length = 338
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|112180378|gb|AAH23780.1| Far upstream element (FUSE) binding protein 1 [Mus musculus]
gi|148679987|gb|EDL11934.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Mus
musculus]
Length = 640
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ ADPN++ + G+ +QI A ++ E I
Sbjct: 385 GLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 169 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 229 KPLR---ITGDPYKVQQAKEMVLELI 251
>gi|359324036|ref|XP_003640271.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Canis lupus familiaris]
Length = 464
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQ+ ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEGSEDRVITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAPYLLQ 452
>gi|294867846|ref|XP_002765257.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239865270|gb|EEQ97974.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 401
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAEL 285
+KTK+C ++ +GSC +G RC FAH +EL
Sbjct: 91 YKTKVCRHYMRGSCRYGSRCTFAHQLSEL 119
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
A S T ++ + S A A+IG G + I R +GA ++I++ P +E+ G+
Sbjct: 264 APSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGT 323
Query: 218 FEQIKQASAMVRELIVRIG-PAHAKNPATAGSA 249
Q++ A +++ + G PA P T G+A
Sbjct: 324 ASQVQTAQQLIQNFMAEAGAPAQ---PQTGGAA 353
>gi|261326721|emb|CBH09694.1| zinc finger protein 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 130
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C + K G C++GDRC FAHG AELR +
Sbjct: 80 KTKMCIYWEKNGECSWGDRCAFAHGPAELRASV 112
>gi|156098889|ref|XP_001615460.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804334|gb|EDL45733.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2172
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
FKTKLC F K G+C GD+C AHG AELR+
Sbjct: 570 FKTKLCKYFDKEGTCPSGDKCRHAHGQAELRQ 601
>gi|294867022|ref|XP_002764935.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864771|gb|EEQ97652.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 396
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAEL 285
+KTK+C ++ +GSC +G RC FAH +EL
Sbjct: 90 YKTKVCRHYMRGSCRYGSRCTFAHQLSEL 118
>gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP K [Xenopus laevis, Peptide, 396
aa]
Length = 396
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + + R I + G+ +QI
Sbjct: 315 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQI 374
Query: 222 KQASAMVRELIVRIGPAHA 240
+ A +++ + + +A
Sbjct: 375 QNARFLLQNSVKQFSEDYA 393
>gi|359472655|ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
vinifera]
Length = 396
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 313 FKTELCNKWQESGTCPYGDHCQFAHGIEELR 343
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 25/88 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ + CP+G+ C F H G + ++ P+
Sbjct: 314 KTELCNKWQESGTCPYGDHCQFAH----GIEELRPVIRHPR------------------- 350
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+ +C + + + C +G +CHF H
Sbjct: 351 --YKTEVCRMVLAGDACPYGHRCHFRHA 376
>gi|297737756|emb|CBI26957.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 315 FKTELCNKWQESGTCPYGDHCQFAHGIEELR 345
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 25/88 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ + CP+G+ C F H G + ++ P+
Sbjct: 316 KTELCNKWQESGTCPYGDHCQFAH----GIEELRPVIRHPR------------------- 352
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+ +C + + + C +G +CHF H
Sbjct: 353 --YKTEVCRMVLAGDACPYGHRCHFRHA 378
>gi|312075410|ref|XP_003140404.1| KH domain-containing protein [Loa loa]
Length = 642
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN---IELEGSFEQIKQA 224
+I+V + L G IIGKGG N +++ R TGA++ I D D + + + G+F+ +
Sbjct: 532 EIAVPSRLVGRIIGKGGQNVRELQRMTGAQVKIPDDTGDDETQKATIVRVLGNFQSSQAV 591
Query: 225 SAMVRELI------VRIGPAHAKNPAT 245
A + +LI + IGP + ++ ++
Sbjct: 592 QARLSQLINDFSQRLNIGPTNGQSTSS 618
>gi|84662730|ref|NP_476513.2| far upstream element-binding protein 1 [Mus musculus]
gi|74144333|dbj|BAE36030.1| unnamed protein product [Mus musculus]
Length = 642
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ ADPN++ + G+ +QI A ++ E I
Sbjct: 384 GLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 442
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 168 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 227
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 228 KPLR---ITGDPYKVQQAKEMVLELI 250
>gi|417398920|gb|JAA46493.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 322
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS +KT+LC F++ G C +G +C FAHG ELR+ +
Sbjct: 96 SSRYKTELCRTFSESGRCRYGAKCQFAHGPGELRQAS 132
>gi|356574244|ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Glycine max]
Length = 321
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 237 FKTELCNKWQETGTCPYGDHCQFAHGIGELR 267
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 26/106 (24%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 238 KTELCNKWQETGTCPYGDHCQFAH----GIGELRPVIRHPR------------------- 274
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAF 138
K+ +C + + C +G +CHF H E K + +S PR+
Sbjct: 275 --YKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAV-VSQPKPRSM 317
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 357 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQI 416
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 417 QNAQYLLQ 424
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G+ +Q++ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARH 419
Query: 227 MVRELIVRIGPAHAKNPATAGSA 249
++ E ++G A PA G +
Sbjct: 420 LIDE---KVGGASLGAPAAFGQS 439
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T +I V S AIIGKGG KQ+ TGAK+ I E N R I + G FE I +
Sbjct: 109 TCRIVVPKSAVSAIIGKGGQQIKQLQDSTGAKIQISSREDGLNERIISIIGPFESISDTA 168
Query: 226 AMVRELIVR-------IGPAHAKNPATAGSAAHPLSSNFKTKL 261
V I + ++K+ + G ++ LS NF ++
Sbjct: 169 IKVTNSIQNDPNLKDLLNVIYSKDTSMNGRSS--LSQNFVNQV 209
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
MGG P + PA S T ++ + S A A+IG G + I R +GA ++I++
Sbjct: 371 MGGH--APSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETR 428
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELI 232
P +E+ G+ Q++ A +++ +
Sbjct: 429 GVPGEMTVEINGTASQVQAAQQLIQNFM 456
>gi|224012423|ref|XP_002294864.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969303|gb|EED87644.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 810
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 252 PLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
P ++ KT++C N K G C F + CHFAH ELRK
Sbjct: 220 PANTKLKTEMCRNILKIGYCQFKENCHFAHSKEELRK 256
>gi|449667206|ref|XP_002160219.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Hydra
magnipapillata]
Length = 393
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAGAIIG+GG + I +++GA + I+D N R I + G+ +QI
Sbjct: 312 GDIQTTQVTIPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGKNDRVITITGTQDQI 371
Query: 222 KQASAMVRELI 232
+ ++++ +
Sbjct: 372 QYGQFLMQQSV 382
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFEQIKQASAMV 228
S+ A G +IG+GG N K I +QTGA + + R DPN + + GS ++I A ++
Sbjct: 383 SIPAHKCGIVIGRGGENIKSISQQTGAFVEVCRQPNGDPNFKLFTIRGSPQEIDHAKQLI 442
Query: 229 RELI 232
E I
Sbjct: 443 EEKI 446
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
V S+ G IIG+GG +I ++G K+ I A R+I L GS + I++A A++ E
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLPERSISLTGSLDAIQRARALIDE 166
Query: 231 LIVR 234
++ R
Sbjct: 167 IVSR 170
>gi|118361512|ref|XP_001013984.1| zinc finger protein [Tetrahymena thermophila]
gi|89295751|gb|EAR93739.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 252
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 70 NLPQAVPAPSRNMAVPPPASNG------PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
NL Q++ N P SN T K+ +CN C +G KC FAHG+ E
Sbjct: 101 NLQQSLKLDEGNDGQKSPDSNNGKKQTDQTKYKTELCNTFTITGHCDYGAKCRFAHGKDE 160
Query: 124 LGKPIAISHDDPRA 137
L K +I++++ R
Sbjct: 161 LQKKPSITNNNFRT 174
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 227 MVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAEL 285
+ + L + G K+P + + +KT+LC F G C +G +C FAHG EL
Sbjct: 102 LQQSLKLDEGNDGQKSPDSNNGKKQTDQTKYKTELCNTFTITGHCDYGAKCRFAHGKDEL 161
Query: 286 RK 287
+K
Sbjct: 162 QK 163
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGVP 411
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSA 249
+QI+ A ++ E ++G A P G +
Sbjct: 412 QQIEVARHLIDE---KVGGASLGAPGAFGQS 439
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|157127959|ref|XP_001661247.1| butyrate response factor 1 (TIS11B protein) [Aedes aegypti]
gi|108882307|gb|EAT46532.1| AAEL002308-PA [Aedes aegypti]
Length = 355
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
+S +KT+LC F + G C +GD+C FAHG ELR
Sbjct: 83 TSRYKTELCRPFEEAGECKYGDKCQFAHGMQELRN 117
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
R + P P + K+ +C A CK+GDKC FAHG EL
Sbjct: 71 RTQSEPLPQQVNTSRYKTELCRPFEEAGECKYGDKCQFAHGMQEL 115
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRK 287
+KT+LC F + G C +G RCHF H A E R
Sbjct: 124 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARN 155
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 159 ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHE--ADPNLRNIELE 215
A+ GA+ T I V + G +IGK G + + +GAK+ I +D E +D R +EL
Sbjct: 153 AATGATNTHTIEVPNNKVGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRPVELV 212
Query: 216 GSFEQIKQASAMVRELIVR 234
G+ E I +A +++ +I
Sbjct: 213 GTQESIDKAEQLIKSVIAE 231
>gi|353228767|emb|CCD74938.1| putative propionyl-CoA carboxylase alpha subunit [Schistosoma
mansoni]
Length = 1003
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 30/111 (27%)
Query: 11 TGINANGVFKKSKHESESGVGSKSKPCTKFFSTAG--CPFGESCHFLHYFPGGYNAVAQM 68
T +++NG K K++S + K++ C K+F G CP G CHF H + ++
Sbjct: 881 TPVSSNG--SKHKNDSLFNIRYKTQVC-KYFQEHGGYCPVGVKCHFAH-------GIEEL 930
Query: 69 MNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+ P++ P +S++C ++ C +GDKC+F H
Sbjct: 931 RD-PKSHPK-----------------FRSQICRNYSTTGNCSYGDKCYFKH 963
>gi|222624764|gb|EEE58896.1| hypothetical protein OsJ_10525 [Oryza sativa Japonica Group]
Length = 439
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
KT+LC + +G+C +G RC FAHG ELR
Sbjct: 366 KTELCNKWERGACPYGARCRFAHGLQELR 394
>gi|452848007|gb|EME49939.1| hypothetical protein DOTSEDRAFT_68678 [Dothistroma septosporum
NZE10]
Length = 545
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
I V +S G IIGKGG K + R +G K+++ + + RNI+L G+ Q+++A ++
Sbjct: 374 IQVPSSAVGMIIGKGGETIKDMQRTSGCKINVNQPQHPDHHRNIDLAGTARQMEEAERII 433
Query: 229 RELI 232
E +
Sbjct: 434 WEKV 437
>gi|444322576|ref|XP_004181929.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
gi|387514975|emb|CCH62410.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
Length = 348
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAEL 285
FKT+LC F KG+C +G++C FAHG EL
Sbjct: 248 FKTELCETFTTKGTCKYGNKCQFAHGLHEL 277
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 253 LSSNFKTKLCGNFAK-GSCTFGDRCHFAHG 281
+SSNF+TK C N+ K G C +G RC F HG
Sbjct: 282 ISSNFRTKPCNNWEKLGYCPYGKRCQFKHG 311
>gi|395334078|gb|EJF66454.1| hypothetical protein DICSQDRAFT_150954 [Dichomitus squalens
LYAD-421 SS1]
Length = 750
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KG+C +G +C FAHG ELRK
Sbjct: 433 YKTELCRSWEEKGTCRYGAKCQFAHGEEELRK 464
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ K+ +C C++G KC FAHGE EL K
Sbjct: 432 LYKTELCRSWEEKGTCRYGAKCQFAHGEEELRK 464
>gi|193678797|ref|XP_001952274.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Acyrthosiphon pisum]
Length = 621
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 148 RYEPPPAPGPAASFGASATAK-----ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
+Y+P P + + A + +D+ AG IIGKGG K + ++TGA +S+ D
Sbjct: 14 QYQPQREYVPQQQYRQTRPANPDDLLVDIDSQFAGLIIGKGGSVIKGLRKETGAFISVLD 73
Query: 203 HEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
++ L+ +++ G+ + A +V +++ P K S P+ S F
Sbjct: 74 SDS-YGLKTVKISGNQKARDHALKLVNDIVDANNPEKIKQKLQQESEQAPVQSTF 127
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 355 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 414
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 415 QNAQYLLQ 422
>gi|50555936|ref|XP_505376.1| YALI0F13497p [Yarrowia lipolytica]
gi|49651246|emb|CAG78183.1| YALI0F13497p [Yarrowia lipolytica CLIB122]
Length = 395
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+KT++C +F K GSC++G++C FAHG EL+
Sbjct: 332 YKTEMCSSFQKTGSCSYGEKCQFAHGEHELKNV 364
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ K+ MC+ C +G+KC FAHGE EL
Sbjct: 331 LYKTEMCSSFQKTGSCSYGEKCQFAHGEHEL 361
>gi|256085881|ref|XP_002579139.1| acetyl-CoA carboxylase; methylcrotonyl-CoA carboxylase [Schistosoma
mansoni]
Length = 1101
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 34/121 (28%)
Query: 1 MDTRKRTKPETGINANGVFKKSKHESESGVGSKSKPCTKFFSTAG--CPFGESCHFLHYF 58
+D +K K +++NG K K++S + K++ C K+F G CP G CHF H
Sbjct: 973 VDMKKSNK----VSSNG--SKHKNDSLFNIRYKTQVC-KYFQEHGGYCPVGVKCHFAH-- 1023
Query: 59 PGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+ ++ + P++ P +S++C ++ C +GDKC+F
Sbjct: 1024 -----GIEELRD-PKSHPK-----------------FRSQICRNYSTTGNCSYGDKCYFK 1060
Query: 119 H 119
H
Sbjct: 1061 H 1061
>gi|159162537|pdb|1J4W|A Chain A, Complex Of The Kh3 And Kh4 Domains Of Fbp With A
Single_stranded 29mer Dna Oligonucleotide From The Fuse
Element Of The C-Myc Oncogene
Length = 174
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 115 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 174
>gi|145527662|ref|XP_001449631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417219|emb|CAK82234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH---YFPGGYNAVA----QMMNLPQAVPAPSRNMAVP 85
K++ C F + C G C F H G N MM Q P + +
Sbjct: 14 KTQLCRHFITNGNCALGARCQFAHGREELRGNANGFQPNSDFMMPQHQQGVLPVKVQPIN 73
Query: 86 PPASNGPTVVK-----SRMCNRLNSAEG-CKFGDKCHFAHGEWELGK 126
P +N +++K +++C N G CK G C FAHGE EL +
Sbjct: 74 PMIANYKSIIKIKHFIAQLCKHFNPQTGLCKNGFTCTFAHGEQELNQ 120
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
+ +KT+LC +F G+C G RC FAHG ELR A
Sbjct: 10 NQKYKTQLCRHFITNGNCALGARCQFAHGREELRGNA 46
>gi|357128422|ref|XP_003565872.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Brachypodium distachyon]
Length = 338
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G C +GD+C FAHG AELR
Sbjct: 262 FKTELCNKWEETGVCLYGDQCQFAHGIAELR 292
>gi|357119980|ref|XP_003561710.1| PREDICTED: putative zinc finger CCCH domain-containing protein
21-like [Brachypodium distachyon]
Length = 297
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 256 NFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+ KT+LC + +G+C FG RC FAHG E+R
Sbjct: 225 SHKTELCNKWERGACPFGGRCRFAHGLQEMR 255
>gi|443700302|gb|ELT99335.1| hypothetical protein CAPTEDRAFT_173082 [Capitella teleta]
Length = 552
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 148 RYEPPPAPGP-----AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD 202
R +P P P P A++ KI V S AG +IGKGG +QI +GA + +
Sbjct: 117 REKPDPNPKPCEGEMKANYERHKQMKILVPNSTAGMVIGKGGAFIRQIKDDSGAYVQVSQ 176
Query: 203 HEADPNL--RNIELEGSFEQIKQASAMVRELIVR 234
D +L R + + G EQ ++A +V E I+
Sbjct: 177 KSKDMSLPERCVTIAGDTEQNREAIDLVLEKIME 210
>gi|356534336|ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Glycine max]
Length = 360
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 276 FKTELCNKWQETGTCPYGDHCQFAHGIGELR 306
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 26/106 (24%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 277 KTELCNKWQETGTCPYGDHCQFAH----GIGELRPVIRHPR------------------- 313
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAF 138
K+ +C + + C +G +CHF H E K + +S PR+
Sbjct: 314 --YKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAV-VSQPKPRSM 356
>gi|308485360|ref|XP_003104879.1| CRE-MEX-5 protein [Caenorhabditis remanei]
gi|308257577|gb|EFP01530.1| CRE-MEX-5 protein [Caenorhabditis remanei]
Length = 473
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 256 NFKTKLCGNFAKGS--CTFGDRCHFAHGAAELRKT 288
N+KT+LC A G+ C G RC FAHG ELR T
Sbjct: 274 NYKTRLCMMHASGTRPCDMGSRCKFAHGLKELRST 308
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 244 ATAGSAAHPLSSNFKTKLCGNFAKGS---CTFGDRCHFAH 280
+T A +P ++ +KTKLC NFA+G C +G RC F H
Sbjct: 307 STDAPARYP-NNKYKTKLCKNFARGGSGFCPYGLRCEFVH 345
>gi|213402419|ref|XP_002171982.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212000029|gb|EEB05689.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 467
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 99 MCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPA 158
+ R E C+ A +W L + A + P G +G P + GPA
Sbjct: 153 LTGRPECIEQCRREMLHMIAEYKWTLARGAAGTAASPAVAGLNTNVVG-----PGSNGPA 207
Query: 159 ASFGASATAK---ISVDASL--------AGAIIGKGGVNSKQICRQTGAKLSIRDHEADP 207
+ G++ATA IS DASL G IIGKGG + + + +++I+
Sbjct: 208 VATGSTATAAPAGISADASLTFAIPDRCVGLIIGKGGETIRDLQEASKTRINIKSESDSR 267
Query: 208 N-LRNIELEGSFEQIKQASAMVRELI 232
N R + L GS E +A AM+ +++
Sbjct: 268 NGARPVYLYGSPEATARAQAMILDIV 293
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 152 PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLR 210
PP P+ S + T ISV G +IG+GG +++ QT ++ + D N R
Sbjct: 330 PPTLSPSLST-LTRTKIISVPRESVGLLIGRGGETIREMNAQTKCQIKVAPDLRTPDNRR 388
Query: 211 NIELEGSFEQIKQASAMVRELIVR 234
N+ L G+ E I+ A A +R + R
Sbjct: 389 NVSLIGTPEAIELAEATIRRRLER 412
>gi|122230766|sp|Q10MN8.1|C3H21_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
21; Short=OsC3H21
gi|108707692|gb|ABF95487.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza sativa
Japonica Group]
Length = 457
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
KT+LC + +G+C +G RC FAHG ELR
Sbjct: 384 KTELCNKWERGACPYGARCRFAHGLQELR 412
>gi|313221120|emb|CBY31948.1| unnamed protein product [Oikopleura dioica]
Length = 270
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT++C F + G C F D+C FAHG +LR+ +
Sbjct: 146 TSRYKTEMCQRFTETGECRFMDKCQFAHGIEQLRQVS 182
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 40 FFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPP---ASNGPTVVK 96
F A G SC N+V ++ + V R+M+ P P + K
Sbjct: 97 FSDDATTLLGGSC------AASQNSVEDDEDMIEMVRNRGRSMSTPGPLYGTKFNTSRYK 150
Query: 97 SRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+ MC R C+F DKC FAHG +L
Sbjct: 151 TEMCQRFTETGECRFMDKCQFAHGIEQL 178
>gi|22218811|pdb|1J5K|A Chain A, Complex Of The Kh3 Domain Of Hnrnp K With A
Single_stranded 10mer Dna Oligonucleotide
Length = 89
Score = 42.7 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 11 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 70
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 71 QNAQYLLQ 78
>gi|349802739|gb|AEQ16842.1| hypothetical protein [Pipa carvalhoi]
Length = 174
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 241 KNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
KNP A LS +KT+LC F++ G+C +G +C FAHG ELR+
Sbjct: 94 KNPLPALPT---LSPRYKTELCRTFSETGTCKYGAKCQFAHGKTELRE 138
>gi|343470431|emb|CCD16865.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 342
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
G A L+ +KTK C NF G+C + RC FAH A ELR
Sbjct: 52 GRAKVVLAERYKTKYCNNFVINGACPYDTRCMFAHSAEELR 92
>gi|209878564|ref|XP_002140723.1| zinc finger, CCCH type domain-containing protein [Cryptosporidium
muris RN66]
gi|209556329|gb|EEA06374.1| zinc finger, CCCH type domain-containing protein [Cryptosporidium
muris RN66]
Length = 275
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 254 SSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
S FKT LC + KGSC G+ C +AHG ELR
Sbjct: 72 SDLFKTSLCIYWLKGSCAVGESCRYAHGVHELR 104
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 355 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 414
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 415 QNAQYLLQ 422
>gi|221056430|ref|XP_002259353.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809424|emb|CAQ40126.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1940
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
FKTKLC F K G+C GDRC AHG AELR+
Sbjct: 521 FKTKLCKYFDKEGTCPSGDRCRHAHGQAELRQ 552
>gi|313222579|emb|CBY41626.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT++C F + G C F D+C FAHG +LR+ +
Sbjct: 126 TSRYKTEMCQRFTETGECRFMDKCQFAHGIEQLRQVS 162
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 63 NAVAQMMNLPQAVPAPSRNMAVPPP---ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
N+V ++ + V R+M+ P P + K+ MC R C+F DKC FAH
Sbjct: 94 NSVEDDEDMIEMVRNRGRSMSTPGPLYGTKFNTSRYKTEMCQRFTETGECRFMDKCQFAH 153
Query: 120 GEWEL 124
G +L
Sbjct: 154 GIEQL 158
>gi|147807333|emb|CAN73004.1| hypothetical protein VITISV_044058 [Vitis vinifera]
Length = 122
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
+ V S A A+IG GVN + R +GA ++I + + P +E+ GS Q++ A ++
Sbjct: 1 MQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLI 60
Query: 229 RELI 232
+ +
Sbjct: 61 QNFM 64
>gi|403371081|gb|EJY85417.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 536
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 240 AKNPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+ N T + + +KT++C N+ G+C FGD C FAHG EL+K +
Sbjct: 183 STNVDTQSNTGSSFKTKYKTEICRNWELHGTCKFGDTCAFAHGDFELQKKS 233
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 71 LPQAVPAPSRNMAVPPPASNG---PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+P + + + V ++ G T K+ +C CKFGD C FAHG++EL K
Sbjct: 173 IPSGIQTSTTSTNVDTQSNTGSSFKTKYKTEICRNWELHGTCKFGDTCAFAHGDFELQK 231
>gi|313228611|emb|CBY07403.1| unnamed protein product [Oikopleura dioica]
Length = 270
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT++C F + G C F D+C FAHG +LR+ +
Sbjct: 146 TSRYKTEMCQRFTETGECRFMDKCQFAHGIEQLRQVS 182
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 63 NAVAQMMNLPQAVPAPSRNMAVPPP---ASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
N+V ++ + V R+M+ P P + K+ MC R C+F DKC FAH
Sbjct: 114 NSVEDDEDMIEMVRNRGRSMSTPGPLYGTKFNTSRYKTEMCQRFTETGECRFMDKCQFAH 173
Query: 120 GEWEL 124
G +L
Sbjct: 174 GIEQL 178
>gi|296418898|ref|XP_002839062.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635056|emb|CAZ83253.1| unnamed protein product [Tuber melanosporum]
Length = 354
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 130 ISHDDPRAFGAV-------PGRMGGRYEPP--PAPGPAASF--GASATAKISVDASLAGA 178
I + DP+A A PG+ G P PAP P A+ G T +I + + GA
Sbjct: 234 IHYADPQAASAYSGAGPHQPGQAGAGPTPQQGPAPNPMANMLPGQPLTQQIFIPNDMVGA 293
Query: 179 IIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
IIGKGG +I + +G+ + I + + + N R + + G+ E + A M+
Sbjct: 294 IIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 343
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI +GA + I + R I + G+ +QI
Sbjct: 356 GPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQI 415
Query: 222 KQASAMVRELIVRI 235
+ A +++ ++ +
Sbjct: 416 QNAQFLLQSSVLHL 429
>gi|17535271|ref|NP_496043.1| Protein MEX-6 [Caenorhabditis elegans]
gi|21431916|sp|Q09436.3|MEX6_CAEEL RecName: Full=Zinc finger protein mex-6
gi|13548299|emb|CAA88088.2| Protein MEX-6 [Caenorhabditis elegans]
Length = 467
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 253 LSSNFKTKLCGNFAKG--SCTFGDRCHFAHGAAELRKTAI 290
L NFKT+LC A G C G RC FAHG ELR + I
Sbjct: 270 LPHNFKTRLCMTHAAGINPCALGARCKFAHGLKELRASDI 309
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN--IELEGSFE 219
G+SA +I + AS G +IGKGG KQ+ +TG K+ + + P + + + G
Sbjct: 166 GSSAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRISGDPY 225
Query: 220 QIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRC 276
+++QA REL+V I + K G+F G FG R
Sbjct: 226 KVQQA----RELVVEI---------------------IREKDQGDFRSGRSDFGSRL 257
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G ++ A G +IGKGG K I +Q+GA + ++ + DPN+R + GS
Sbjct: 357 GGLQEVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRTFSIRGSP 416
Query: 219 EQIKQASAMVRELI 232
+Q++ A ++ + I
Sbjct: 417 QQMEMARQLIDDKI 430
>gi|401424203|ref|XP_003876587.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492830|emb|CBZ28108.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 115
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+ K+K+C + K G+C +GDRC FAHGA ELR A
Sbjct: 69 TKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPA 104
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDD 134
T +KS+MC C +GD+C FAHG EL P + +D
Sbjct: 69 TKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPASQPRND 110
>gi|307947822|gb|ABV54790.2| Tis11-like protein [Ilyanassa obsoleta]
Length = 503
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+KT+LC F + G C +GD+C FAHGA ELR +
Sbjct: 147 YKTELCRPFEESGHCKYGDKCQFAHGAHELRNLS 180
>gi|390604243|gb|EIN13634.1| hypothetical protein PUNSTDRAFT_117353 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 814
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KG+C +G +C FAHG ELR A
Sbjct: 504 YKTELCRSWEEKGTCRYGTKCQFAHGEEELRVVA 537
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S T + + + A A+IG G N I R +GA ++I++ P +E+ G
Sbjct: 395 PQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISG 454
Query: 217 SFEQIKQASAMVRELI 232
+ QI+ A +V+ +
Sbjct: 455 TSSQIQAAQQLVQNFM 470
>gi|353239624|emb|CCA71528.1| hypothetical protein PIIN_05464 [Piriformospora indica DSM 11827]
Length = 613
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 287
+KT+LC ++ KGSC +G +C FAHG EL+K
Sbjct: 339 YKTELCRSWEEKGSCRYGPKCQFAHGEEELKK 370
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 84 VPPPASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
VP P GP+ + K+ +C C++G KC FAHGE EL K
Sbjct: 321 VPNPNQGGPSANNRKLGLYKTELCRSWEEKGSCRYGPKCQFAHGEEELKK 370
>gi|350014484|dbj|GAA37204.1| zinc finger protein 36 C3H1 type-like 1 [Clonorchis sinensis]
Length = 383
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 9/49 (18%)
Query: 236 GPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAA 283
GP +NP +HP ++TKLC NFA+ G C+FGD C F H A+
Sbjct: 289 GPEELRNPQ-----SHP---KYRTKLCRNFAESGVCSFGDNCFFLHVAS 329
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 257 FKTKLCGNFAK--GSCTFGDRCHFAHGAAELR 286
+KT+ C +F G C GD+CHFAHG ELR
Sbjct: 263 YKTQPCRHFDMNGGLCPAGDKCHFAHGPEELR 294
>gi|332027899|gb|EGI67954.1| Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior]
Length = 992
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G + ++++ LAGAIIGKGG ++I +GA ++I + N R I + G QI
Sbjct: 158 GNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGIPSQI 217
Query: 222 KQASAMVRE 230
+ A ++++
Sbjct: 218 QMAQYLLQQ 226
>gi|328768071|gb|EGF78118.1| hypothetical protein BATDEDRAFT_90775 [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 147 GRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEA 205
G Y AP A +G TA + V + G +IGKGG K + +++GA++++ ++ E
Sbjct: 240 GAYGQSAAPYGATPYGGGITAHVQVPQAHVGLVIGKGGETIKSLQQRSGARITVAKETET 299
Query: 206 DP--NLRNIELEGSFEQIKQASAMVRELI 232
+P R + + G+ + A MV E+I
Sbjct: 300 EPGATTRIVTIYGNEHAVATAQHMVNEII 328
>gi|343475754|emb|CCD12934.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 342
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
G A L+ +KTK C NF G+C + RC FAH A ELR
Sbjct: 52 GHAKVVLAERYKTKYCNNFVINGACPYDTRCMFAHSAEELR 92
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 134 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 189
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 190 LIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSI 225
>gi|327263405|ref|XP_003216510.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Anolis
carolinensis]
Length = 425
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 347 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 406
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 407 QNAQYLLQ 414
>gi|326935103|ref|XP_003213618.1| PREDICTED: UPF0553 protein C9orf64-like, partial [Meleagris
gallopavo]
Length = 400
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 48 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 107
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 108 QNAQYLLQ 115
>gi|196016786|ref|XP_002118243.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
gi|190579144|gb|EDV19246.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
Length = 102
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
SS +KT+LC F + G+C +GD+C FAHG ELR A
Sbjct: 33 SSRYKTELCRPFEESGTCKYGDKCQFAHGIHELRALA 69
>gi|414881223|tpg|DAA58354.1| TPA: hypothetical protein ZEAMMB73_099784 [Zea mays]
Length = 352
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD+C FAHG AELR
Sbjct: 277 LKTELCNKWEETGACPYGDQCQFAHGVAELR 307
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H VA++ P P
Sbjct: 278 KTELCNKWEETGACPYGDQCQFAH-------GVAELR-----------------PVIRHP 313
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C + + E C +G +CHF H
Sbjct: 314 RY-KTQVCRMVLAGEVCPYGHRCHFRH 339
>gi|154339638|ref|XP_001565776.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063094|emb|CAM45291.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 115
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+ K+K+C + K G+C +GDRC FAHGA ELR A
Sbjct: 69 TKMKSKMCIYWEKNGNCAWGDRCAFAHGAEELRNPA 104
>gi|427786629|gb|JAA58766.1| Putative kinase anchor protein [Rhipicephalus pulchellus]
Length = 455
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSFEQ 220
T + V A G IIG+ G + +CR T AK+ + D E NL+ + + G+ EQ
Sbjct: 124 TETVFVPAKSCGRIIGRNGETVRHMCRVTSAKILVDRAGGDDRERSNNLKTVSITGTREQ 183
Query: 221 IKQASAMVRE 230
I+ A M+ E
Sbjct: 184 IRMAITMIDE 193
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 362 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQI 421
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 422 QNAQYLLQ 429
>gi|149051562|gb|EDM03735.1| zinc finger protein 36, C3H type-like 1 [Rattus norvegicus]
Length = 220
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|387018122|gb|AFJ51179.1| Heterogeneous nuclear ribonucleoprotein K-like [Crotalus
adamanteus]
Length = 426
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 347 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 406
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 407 QNAQYLLQ 414
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN--IELEGSFE 219
G S +I + AS G +IGKGG KQ+ +TG K+ + P + + + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGDPF 219
Query: 220 QIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 220 KVQQAREMVLEII 232
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 135 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 190
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 191 LIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSI 226
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 135 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 190
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 191 LIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSI 226
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S T + + + A A+IG G N I R +GA ++I++ P +E+ G
Sbjct: 395 PQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISG 454
Query: 217 SFEQIKQASAMVRELIVRIGPAHAKNP----ATAGSAAHPLSS 255
+ QI+ A +V+ + A ++P + G +A+P ++
Sbjct: 455 TSSQIQAAQQLVQNFMAEAASA-TQDPMGGSVSQGYSAYPTTA 496
>gi|147906092|ref|NP_001080641.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|28278093|gb|AAH44277.1| Fubp1 protein [Xenopus laevis]
Length = 653
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I + +GA++ ++ + ADPN++ + GS +QI A +V E I
Sbjct: 377 GLIIGKGGETIKNISQTSGARIELQRNPPPNADPNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 173 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---IAGDP 229
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 230 YKVQQAKEMVLELI 243
>gi|392597123|gb|EIW86445.1| hypothetical protein CONPUDRAFT_78791 [Coniophora puteana
RWD-64-598 SS2]
Length = 654
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KG+C +G +C FAHG ELR A
Sbjct: 355 YKTELCRSWEEKGTCRYGTKCQFAHGEGELRSVA 388
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 69 MNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+N P A APS N + P + + K+ +C C++G KC FAHGE EL
Sbjct: 330 LNAP-APSAPSSNGSGPSANNRKLGLYKTELCRSWEEKGTCRYGTKCQFAHGEGEL 384
>gi|195478028|ref|XP_002100381.1| GE17025 [Drosophila yakuba]
gi|194187905|gb|EDX01489.1| GE17025 [Drosophila yakuba]
Length = 448
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 144 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 179
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 136 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 176
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T +I + S A AIIGKGG KQ+ TGAK+ I E N R I + G FE I +
Sbjct: 108 TCRIVIPKSAASAIIGKGGQQIKQLQDSTGAKIQISSREDGLNERIISIIGPFESISDTA 167
Query: 226 AMV 228
V
Sbjct: 168 IKV 170
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
S T + + S A A+IG G N I R +GA ++I++ P +E+ G+ QI+
Sbjct: 436 SVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQA 495
Query: 224 ASAMVRELI 232
A +V+ +
Sbjct: 496 AQQLVQNFM 504
>gi|353228768|emb|CCD74939.1| putative propionyl-CoA carboxylase alpha subunit [Schistosoma
mansoni]
Length = 915
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 28/110 (25%)
Query: 11 TGINANGVFKKSKHESESGVGSKSKPCTKFFSTAG-CPFGESCHFLHYFPGGYNAVAQMM 69
T +++NG K K++S + K++ C F G CP G CHF H + ++
Sbjct: 793 TPVSSNG--SKHKNDSLFNIRYKTQVCKYFQEHGGYCPVGVKCHFAH-------GIEELR 843
Query: 70 NLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+ P++ P +S++C ++ C +GDKC+F H
Sbjct: 844 D-PKSHPK-----------------FRSQICRNYSTTGNCSYGDKCYFKH 875
>gi|424512903|emb|CCO66487.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 161 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE-ADPNLRNIELEGSFE 219
+ + T K+ SL G IIGKGG K + TGAK+ I AD R I + G+
Sbjct: 298 YEETRTVKLDCPQSLVGKIIGKGGETIKGLASTTGAKVIIDQMSMADGEPRKIVITGTNT 357
Query: 220 QIKQASAMVRELI 232
QI++ S M +++
Sbjct: 358 QIEKVSKMCEDIM 370
>gi|414881224|tpg|DAA58355.1| TPA: hypothetical protein ZEAMMB73_099784 [Zea mays]
Length = 351
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD+C FAHG AELR
Sbjct: 276 LKTELCNKWEETGACPYGDQCQFAHGVAELR 306
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H VA++ P P
Sbjct: 277 KTELCNKWEETGACPYGDQCQFAH-------GVAELR-----------------PVIRHP 312
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C + + E C +G +CHF H
Sbjct: 313 RY-KTQVCRMVLAGEVCPYGHRCHFRH 338
>gi|391325207|ref|XP_003737130.1| PREDICTED: uncharacterized protein LOC100897859 [Metaseiulus
occidentalis]
Length = 395
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G C +GD+C FAHG ELR
Sbjct: 51 SSRYKTELCRPFEESGVCKYGDKCQFAHGFQELR 84
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 365 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQI 424
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 425 QNAQYLLQ 432
>gi|198285561|gb|ACH85319.1| far upstream element (FUSE) binding protein 3 [Salmo salar]
Length = 302
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD---HEADPNLRNIELEGSF 218
G ++ A G +IGKGG K I +Q+GA + ++ H DPN+R + G+
Sbjct: 133 GGLQEVTYTIPADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPHNTDPNVRIFSIRGTP 192
Query: 219 EQIKQASAMVRELIVRIGPAHAKN----PATAGSAAH 251
+Q++ A ++ + I G N P T G A H
Sbjct: 193 QQMELARQLIDDKIGGSGIVSNNNFGFSPFTQGPATH 229
>gi|194895813|ref|XP_001978349.1| GG17735 [Drosophila erecta]
gi|190649998|gb|EDV47276.1| GG17735 [Drosophila erecta]
Length = 457
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 138 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 173
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 130 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 170
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 353 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIP 412
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 413 QQIEVARHLIDEKV 426
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G+S ++ + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 161 GSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 217
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 218 DPFKVQQAREMVLEII 233
>gi|145504340|ref|XP_001438142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405303|emb|CAK70745.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 230 ELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
E+ V+ H + + KT+LC NF G C +GD+C FAHG EL+
Sbjct: 33 EIDVKPQKKHFETIQEKQQYIEEYTKKKKTELCKNFVMTGRCKYGDKCSFAHGQTELQ 90
>gi|403375361|gb|EJY87653.1| KH domain containing protein [Oxytricha trifallax]
Length = 794
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEA-DPNLRNIELEGSFEQIKQASAM 227
I V G IIGK G +Q+ + +GAK+ + E + NLRN+ +EG+ ++ ++A +
Sbjct: 392 IPVPNDCVGLIIGKSGDTIRQLQQDSGAKIQVAKKEIPNSNLRNVFVEGTPDKYQKAKEL 451
Query: 228 VRELI 232
+ E+I
Sbjct: 452 IEEII 456
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADP--NLRNIELEGSFEQIKQAS 225
KI V G IIGK G N + I +++ K+ + DP R IE +G + I+ A
Sbjct: 481 KIKVPDKFVGLIIGKSGENLRGIAQRSNTKIFVPQKNNDPGAEERIIEADGDLQNIEIAR 540
Query: 226 AMVRELIVRIGPA-------HAKNPATAGSAAH 251
+ LI R ++KNP +G A +
Sbjct: 541 QEILNLIQRYMTQNNANSFDYSKNPYGSGIAVY 573
>gi|395529320|ref|XP_003766764.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Sarcophilus harrisii]
Length = 474
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T ++++ LAG+IIGKGG KQ+ ++GA + I + R I + G+ +QI+ A
Sbjct: 397 TTQVTIPKDLAGSIIGKGGQRIKQLRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAX 456
Query: 226 AMVR 229
+++
Sbjct: 457 YLLQ 460
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 130 ISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQ 189
+ H P+ GA M G+ PGP GAS T +I + + GAIIGKGG +
Sbjct: 382 VGHAGPQVHGAPHQPMHGQM-----PGPG---GASLTQQIYIPNDMVGAIIGKGGQKINE 433
Query: 190 ICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
I + +G+ + I + + + N R + + G+ E + A M+
Sbjct: 434 IRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYML 472
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 131 SHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQI 190
SH +G P +GG P AP P + + ++ + S A A+IG G N
Sbjct: 290 SHHGLNMYGRDP--LGGHSVPNAAPAPVIT---QVSQRMQIPLSYADAVIGTNGANISYC 344
Query: 191 CRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
R +GA ++I + P +E+ G+ Q++ A +++ +
Sbjct: 345 RRNSGAIITIEETRGVPGEMTVEIHGTASQVQTAQQLIQNFM 386
>gi|32451938|gb|AAH54653.1| Heterogeneous nuclear ribonucleoprotein K [Danio rerio]
gi|182890942|gb|AAI65841.1| Hnrnpk protein [Danio rerio]
Length = 420
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
+ S G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+
Sbjct: 335 SYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGT 394
Query: 218 FEQIKQA 224
+QI+ A
Sbjct: 395 QDQIQNA 401
>gi|70569708|dbj|BAE06461.1| Ci-FUSE [Ciona intestinalis]
Length = 426
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE---ADPNLRNIELEGSFEQIKQASAM 227
V A+ G +IGKGG KQI Q+GA I+ + +D N + ++G+ EQIK A +
Sbjct: 128 VPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQIKMARQL 187
Query: 228 VRELIVRIGPAHAKN 242
++E V GP + N
Sbjct: 188 IQEK-VDAGPGGSSN 201
>gi|323303896|gb|EGA57677.1| Tis11p [Saccharomyces cerevisiae FostersB]
Length = 285
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KGSC +G +C FAHG EL+
Sbjct: 170 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 200
>gi|148674928|gb|EDL06875.1| mCG121849, isoform CRA_f [Mus musculus]
Length = 306
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 158 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 217
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + + I + G+ +QI+ A +++
Sbjct: 218 IKIDEPLEGSEDQIITITGTQDQIQNAQYLLQ 249
>gi|183396881|gb|AAI66022.1| Khsrp protein [synthetic construct]
Length = 542
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 224 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAK 283
Query: 226 AMVRELI 232
++ E I
Sbjct: 284 QLIEEKI 290
>gi|82697008|gb|AAI08415.1| Khsrp protein, partial [Mus musculus]
Length = 551
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 233 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAK 292
Query: 226 AMVRELI 232
++ E I
Sbjct: 293 QLIEEKI 299
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 136 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 191
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 192 LIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSI 227
>gi|225452124|ref|XP_002281139.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
[Vitis vinifera]
Length = 252
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
FKT+LC + KG+C +GD C FAHG ELR
Sbjct: 185 FKTELCNKWQEKGTCPYGDLCQFAHGITELR 215
>gi|323308137|gb|EGA61390.1| Tis11p [Saccharomyces cerevisiae FostersO]
Length = 285
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KGSC +G +C FAHG EL+
Sbjct: 170 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 200
>gi|145497861|ref|XP_001434919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402047|emb|CAK67522.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH------YFPGGY--NAVAQMMNLPQAVPAPSRNMAV 84
K++ C F + C G C F H G+ N+ M PQ P P + +
Sbjct: 14 KTQLCRHFITNGNCALGARCQFAHGRQELRANANGFQPNSEFIMHQNPQVAP-PLKVQPI 72
Query: 85 PPPASNGPTVVKSRMCNRLNSAEG-CKFGDKCHFAHGEWELGK 126
P +N K+++C N G CK G C FAHGE EL +
Sbjct: 73 NPMIAN----YKTQLCKHFNPQTGQCKNGATCTFAHGEQELNQ 111
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTA 289
+ +KT+LC +F G+C G RC FAHG ELR A
Sbjct: 10 NQKYKTQLCRHFITNGNCALGARCQFAHGRQELRANA 46
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 230 ELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF--AKGSCTFGDRCHFAHGAAELRK 287
E I+ P A P +P+ +N+KT+LC +F G C G C FAHG EL +
Sbjct: 54 EFIMHQNPQVA--PPLKVQPINPMIANYKTQLCKHFNPQTGQCKNGATCTFAHGEQELNQ 111
>gi|6323165|ref|NP_013237.1| Tis11p [Saccharomyces cerevisiae S288c]
gi|1706181|sp|P47977.1|CTH2_YEAST RecName: Full=mRNA decay factor CTH2; AltName:
Full=Cysteine-three-histidine protein 2; AltName:
Full=Protein TIS11 homolog; AltName: Full=Protein
YTIS11; AltName: Full=TPA-induced sequence protein 11
gi|914206|gb|AAB33266.1| Ytis11p [Saccharomyces cerevisiae]
gi|995702|emb|CAA62651.1| L3143 [Saccharomyces cerevisiae]
gi|1020085|gb|AAB39898.1| zinc finger protein [Saccharomyces cerevisiae]
gi|1256907|gb|AAB82400.1| Tis11p [Saccharomyces cerevisiae]
gi|1360553|emb|CAA97707.1| TIS11 [Saccharomyces cerevisiae]
gi|45270310|gb|AAS56536.1| YLR136C [Saccharomyces cerevisiae]
gi|151941298|gb|EDN59676.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406165|gb|EDV09432.1| zinc finger protein CTH2 [Saccharomyces cerevisiae RM11-1a]
gi|256273011|gb|EEU07973.1| Tis11p [Saccharomyces cerevisiae JAY291]
gi|259148122|emb|CAY81371.1| Tis11p [Saccharomyces cerevisiae EC1118]
gi|285813551|tpg|DAA09447.1| TPA: Tis11p [Saccharomyces cerevisiae S288c]
gi|323332562|gb|EGA73970.1| Tis11p [Saccharomyces cerevisiae AWRI796]
gi|323347476|gb|EGA81746.1| Tis11p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579857|dbj|GAA25018.1| K7_Tis11p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764405|gb|EHN05929.1| Tis11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297652|gb|EIW08751.1| Tis11p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 285
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KGSC +G +C FAHG EL+
Sbjct: 170 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 200
>gi|170086075|ref|XP_001874261.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651813|gb|EDR16053.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 835
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KG+C +G +C FAHG ELRK +
Sbjct: 527 YKTELCRSWEEKGTCRYGAKCQFAHGEDELRKVS 560
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
TA++++ + L G IIG+GG +I +++GA++++ P R I ++G+ +QI A
Sbjct: 300 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPE-RIITIKGTEQQIHSA 358
Query: 225 SAMVRELI 232
++++ +
Sbjct: 359 QYLLQQCV 366
>gi|320581641|gb|EFW95860.1| Member of the CCCH zinc finger family [Ogataea parapolymorpha DL-1]
Length = 423
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKT 288
+KT++C F KGSC +G +C FAHG EL+K
Sbjct: 353 YKTEMCTQFQEKGSCPYGAKCQFAHGEEELKKV 385
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAE 284
++N+KTKLC N+ K GSC +G RC F HG +
Sbjct: 388 ANNWKTKLCANWLKAGSCRYGKRCCFKHGEDD 419
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 94 VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
+ K+ MC + C +G KC FAHGE EL K
Sbjct: 352 LYKTEMCTQFQEKGSCPYGAKCQFAHGEEELKK 384
>gi|226501578|ref|NP_001141840.1| uncharacterized protein LOC100273982 [Zea mays]
gi|194706136|gb|ACF87152.1| unknown [Zea mays]
Length = 351
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD+C FAHG AELR
Sbjct: 276 LKTELCNKWEETGACPYGDQCQFAHGVAELR 306
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H VA++ P P
Sbjct: 277 KTELCNKWEETGACPYGDQCQFAH-------GVAELR-----------------PVIRHP 312
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C + + E C +G +CHF H
Sbjct: 313 RY-KTQVCRMVLAGEVCPYGHRCHFRH 338
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + + S A IIG GG N I R +GA L+I++ P+ +E++G+ Q++ A
Sbjct: 343 VTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMA 402
Query: 225 SAMVRELI 232
+++E +
Sbjct: 403 QQLIQEAV 410
>gi|325193763|emb|CCA27985.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 442
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 31 GSKSKPCTKFFSTAGCPFGESCHFLHY-FPGGYNAVAQMMNL-PQAVPAPSRNMAVPPPA 88
+ +PC F S GC G+SC F H P + + + + P ++ ++ +++ P +
Sbjct: 8 NANQQPCRYFQSARGCWRGDSCSFRHEKHPNSVSMIDKGDGIAPDSIVNQTQQLSIRPTS 67
Query: 89 SNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGR 148
P K+ C N + GC+ G C F H I S +P GA P
Sbjct: 68 QYAPG--KANFCRFYNGSMGCRNGSSCPFTHSA------IECSTVEPSESGAGPKFANVN 119
Query: 149 Y-EPPPAPGPAASF 161
EPPP P S+
Sbjct: 120 VSEPPPPSAPFESY 133
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 145 MGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE 204
MGG P + PA S T ++ + S A A+IG G + I R +GA ++I++
Sbjct: 302 MGGHA--PSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETR 359
Query: 205 ADPNLRNIELEGSFEQIKQASAMVRELI 232
P +E+ G+ Q++ A +++ +
Sbjct: 360 GVPGEMTVEINGTASQVQAAQQLIQNFM 387
>gi|296087239|emb|CBI33613.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
FKT+LC + KG+C +GD C FAHG ELR
Sbjct: 181 FKTELCNKWQEKGTCPYGDLCQFAHGITELR 211
>gi|145513953|ref|XP_001442887.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410248|emb|CAK75490.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASN-- 90
K++ C F C C F H G + Q PQ+ P + + P A N
Sbjct: 14 KTQLCRHFTQNGVCALAIRCQFAH----GPQELRQNAQQPQSFPEQT----IQPNAYNKV 65
Query: 91 ---GPTVV--KSRMCNRLNSAEG-CKFGDKCHFAHGEWELG 125
P +V K+++C N G CK G C FAHGE EL
Sbjct: 66 QGINPMIVNYKTQLCKHFNPQTGQCKNGPTCTFAHGENELN 106
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC +F + G C RC FAHG ELR+ A
Sbjct: 10 NSKYKTQLCRHFTQNGVCALAIRCQFAHGPQELRQNA 46
>gi|323455118|gb|EGB10987.1| expressed protein [Aureococcus anophagefferens]
Length = 364
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 208 NLRNI-ELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF- 265
L N+ LE + A A + E + R P + +GS P ++TKLC F
Sbjct: 12 RLDNLSRLETDLAESPGALAALAETLERGVPKRSHR--GSGSHKKPSKDLWRTKLCSAFE 69
Query: 266 AKGSCTFGDRCHFAHGAAELRK 287
A G+C G +C FAHGAA+LR+
Sbjct: 70 ATGACPDGAQCTFAHGAAQLRR 91
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
++ T ++++ + G+++GK G N + I +GAK+ + D E+ + R IE+ G+ EQ
Sbjct: 114 STTTVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVKLHDSESGASDRVIEISGTPEQTH 173
Query: 223 QASAMVRELI 232
A ++++ I
Sbjct: 174 AAKSLLQAFI 183
>gi|255085190|ref|XP_002505026.1| predicted protein [Micromonas sp. RCC299]
gi|226520295|gb|ACO66284.1| predicted protein [Micromonas sp. RCC299]
Length = 559
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG + +++C +TGAK+ I D + + ++G EQ+ A A+V+ +I
Sbjct: 424 GKIIGKGGDSIRELCARTGAKIQI-----DKDAATVTIQGKQEQVDAAIALVQAII 474
>gi|156367018|ref|XP_001627217.1| predicted protein [Nematostella vectensis]
gi|156214120|gb|EDO35117.1| predicted protein [Nematostella vectensis]
Length = 945
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD----HEAD------PNLRNIELEGS 217
++ V AS++G IIG+GG N K+I ++TG ++ +D E D P+ R I ++G
Sbjct: 59 ELKVPASVSGVIIGRGGANIKKIQKETGTYINFKDDDEPKEKDFGANRTPSERTIVIKGE 118
Query: 218 FEQIKQASAMVRELI 232
E+ ++A ++++++
Sbjct: 119 REKARKAELIIKKIV 133
>gi|366997863|ref|XP_003683668.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
gi|357521963|emb|CCE61234.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
FKT+LC F KG C +G++C FAHG EL+
Sbjct: 178 FKTELCETFTTKGFCKYGNKCQFAHGLNELK 208
>gi|328909277|gb|AEB61306.1| heterogeneous nuclear ribonucleoprotein K-like protein, partial
[Equus caballus]
Length = 245
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 183 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 242
Query: 222 KQA 224
+ A
Sbjct: 243 QNA 245
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P S T + + S A A+IG G N I R +GA ++I++ P +E+ G
Sbjct: 224 PQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISG 283
Query: 217 SFEQIKQASAMVR 229
+ QI+ A +V+
Sbjct: 284 TASQIQAAQQLVQ 296
>gi|213511967|ref|NP_001133923.1| Butyrate response factor 1 [Salmo salar]
gi|209155826|gb|ACI34145.1| Butyrate response factor 1 [Salmo salar]
Length = 364
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC +F + GSC +G +C FAHG ELR
Sbjct: 118 SNRYKTELCRSFQENGSCKYGSKCQFAHGEPELR 151
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
TA++++ + L G IIG+GG +I +++GA++++ P R I ++G+ +QI A
Sbjct: 317 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPE-RIITIKGTEQQIHSA 375
Query: 225 SAMVRELI 232
++++ +
Sbjct: 376 QYLLQQCV 383
>gi|449523878|ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231198, partial [Cucumis
sativus]
Length = 323
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T + + S A IIG GG N I R +GA L+I++ P+ +E++G+ Q++ A
Sbjct: 196 VTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMA 255
Query: 225 SAMVRELI 232
+++E +
Sbjct: 256 QQLIQEAV 263
>gi|403356653|gb|EJY77925.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 515
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+N+KT+ C NF + G C FG++C +AHG ++R
Sbjct: 149 NNYKTQTCKNFEREGKCKFGEKCSYAHGNVDMR 181
>gi|194377024|dbj|BAG63073.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKGG K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 387 TGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 446
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
>gi|47213422|emb|CAF94921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI +GA + I + R I + G+ +QI
Sbjct: 312 GPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQI 371
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 372 QNAQFLLQ 379
>gi|449015411|dbj|BAM78813.1| unknown zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 647
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 250 AHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
AH ++ +KT+LC ++ + G+C +G +C FAHG ELR
Sbjct: 233 AHAVNDLYKTELCRSWIETGACRYGSKCQFAHGQEELR 270
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 252 PLSSNFKTKLCGNFAK-GSCTFGDRCHFAH 280
P +KTK+C NFA+ GSC +G RC F H
Sbjct: 273 PRHPKYKTKVCKNFAENGSCPYGSRCRFIH 302
>gi|148674927|gb|EDL06874.1| mCG121849, isoform CRA_e [Mus musculus]
Length = 266
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 158 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 217
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + + I + G+ +QI+ A +++
Sbjct: 218 IKIDEPLEGSEDQIITITGTQDQIQNAQYLLQ 249
>gi|413950774|gb|AFW83423.1| hypothetical protein ZEAMMB73_048126 [Zea mays]
Length = 362
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD+C FAHG AELR
Sbjct: 287 LKTELCNKWEETGACPYGDQCQFAHGVAELR 317
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H VA++ P P
Sbjct: 288 KTELCNKWEETGACPYGDQCQFAH-------GVAELR-----------------PVIRHP 323
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C + + E C +G +CHF H
Sbjct: 324 RY-KTQVCRMVLAGEVCPYGHRCHFRH 349
>gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321742|gb|EFH52163.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 28/134 (20%)
Query: 37 CTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVK 96
C +F T GC +GE+C F H P A A +N +P + P NG
Sbjct: 164 CKYYFRTGGCKYGETCRFNHTLPKSCLASAPELNF-LGLPIRPGEVECPYYMRNG----- 217
Query: 97 SRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPPPAPG 156
CKFG +C F H + P I D +F G G +
Sbjct: 218 -----------SCKFGAECKFNHPD-----PTTIGGTDSLSFHGNNGVSIGTF------S 255
Query: 157 PAASFGASATAKIS 170
P ++F AS+T+ S
Sbjct: 256 PKSAFQASSTSWTS 269
>gi|146185835|ref|XP_001032592.2| zinc finger protein [Tetrahymena thermophila]
gi|146142881|gb|EAR84929.2| zinc finger protein [Tetrahymena thermophila SB210]
Length = 607
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
+KT LC NF+K G C GD+C +AHG EL+K
Sbjct: 519 YKTSLCFNFSKEGKCENGDKCRYAHGENELKK 550
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P+AS S+T ++ + S +I+G GGVN +I + +GA+L + + A + +E++G
Sbjct: 672 PSASGRFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQG 731
Query: 217 SFEQIKQASAMVRELI 232
+ +Q K A +++ I
Sbjct: 732 TLDQAKAAQSLLEGFI 747
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARHLIDEKV 425
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|323334059|gb|EGA75443.1| Cth1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 204 YKTELCESFTIKGYCKYGNKCQFAHGLNELK 234
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 66 AQMMNLPQAVP-------APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+Q LP +P P R + P T+ K+ +C CK+G+KC FA
Sbjct: 168 SQSTGLPYTLPIQKTTKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFA 227
Query: 119 HGEWEL 124
HG EL
Sbjct: 228 HGLNEL 233
>gi|207343049|gb|EDZ70631.1| YLR136Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 259
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KGSC +G +C FAHG EL+
Sbjct: 144 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 174
>gi|166406872|gb|ABY87399.1| putative RNA-binding protein [Haliotis diversicolor]
Length = 178
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
I VD S+ G IIGK G + + Q+GA + + +A+ ++L G + + A A++
Sbjct: 81 IYVDQSIVGRIIGKRGQRIRDLQDQSGALIKVFSDQAEGGKVRVQLSGESQNRQAAEALI 140
Query: 229 RELIV---RIGPAHAKNPA 244
REL R GP +N A
Sbjct: 141 RELEEPHDRSGPQRQRNNA 159
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 132 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 187
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 188 LIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSI 223
>gi|410906761|ref|XP_003966860.1| PREDICTED: uncharacterized protein LOC101079369 [Takifugu rubripes]
Length = 317
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 199 SIRDHE-ADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
S +D E D L N E EG + A A++ + V P+ P S+ +
Sbjct: 13 SYQDQEMVDALLANEESEGDGVGVSLAKALLPQ--VETTPSPTLVPWVC-------STRY 63
Query: 258 KTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
KT+LC ++ A G C +G+RC FAHG EL
Sbjct: 64 KTELCTSYSATGFCKYGERCQFAHGLHEL 92
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 71 LPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPI 128
LPQ PS + VP S T K+ +C ++ CK+G++C FAHG EL P
Sbjct: 43 LPQVETTPSPTL-VPWVCS---TRYKTELCTSYSATGFCKYGERCQFAHGLHELHIPF 96
>gi|389742287|gb|EIM83474.1| hypothetical protein STEHIDRAFT_160055 [Stereum hirsutum FP-91666
SS1]
Length = 803
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
+KT+LC ++ KG+C +G +C FAHG E+RK +
Sbjct: 482 YKTELCRSWEEKGTCRYGPKCQFAHGEEEIRKVS 515
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 87 PASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 126
P+ NGP+ + K+ +C C++G KC FAHGE E+ K
Sbjct: 467 PSGNGPSANNRKLGLYKTELCRSWEEKGTCRYGPKCQFAHGEEEIRK 513
>gi|145506531|ref|XP_001439226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406410|emb|CAK71829.1| unnamed protein product [Paramecium tetraurelia]
Length = 284
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT LC ++ G+C+ G RCHFAHG ELR
Sbjct: 13 YKTSLCKHWTTTGNCSIGSRCHFAHGERELR 43
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 82 MAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
M VPP + K+ +C + C G +CHFAHGE EL P
Sbjct: 3 MMVPPQMNPK---YKTSLCKHWTTTGNCSIGSRCHFAHGERELRNP 45
>gi|47219921|emb|CAF97191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI + GA + I + R I + G+ +QI
Sbjct: 270 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQI 329
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 330 QNAQYLLQ 337
>gi|297737277|emb|CBI26478.3| unnamed protein product [Vitis vinifera]
Length = 94
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
FKTKLCG F G C + C+FAHG ELR
Sbjct: 55 FKTKLCGKFRAGVCPYITNCNFAHGMEELR 84
>gi|392333155|ref|XP_003752811.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + R I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ +++
Sbjct: 445 QNTQYLLQ 452
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
+ + S A IIG GG N I R +GA L++++ P+ +E++G+ Q++ A ++
Sbjct: 346 MQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLI 405
Query: 229 RELI 232
+E I
Sbjct: 406 QEFI 409
>gi|397497276|ref|XP_003846118.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Pan paniscus]
Length = 738
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 455 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 514
Query: 226 AMVRELI 232
++ E I
Sbjct: 515 QLIEEKI 521
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E +++
Sbjct: 170 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQK 229
Query: 224 ASAMVRELIVR 234
A M+ +++ R
Sbjct: 230 AKMMLDDIVSR 240
>gi|46309479|ref|NP_996938.1| butyrate response factor 2 [Danio rerio]
gi|42542610|gb|AAH66478.1| Zgc:76924 [Danio rerio]
Length = 310
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
S+ +KT+LC F + GSC +G++C FAHG ELR +
Sbjct: 52 STRYKTELCRPFEENGSCKYGEKCQFAHGYHELRNLS 88
>gi|395512937|ref|XP_003760689.1| PREDICTED: far upstream element-binding protein 2 [Sarcophilus
harrisii]
Length = 777
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 460 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 519
Query: 226 AMVRELI 232
++ E I
Sbjct: 520 QLIEEKI 526
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
+S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 174 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 233
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 234 KAKMMLDDIVSR 245
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
AS + + S A A+IG G + I RQ+GA ++I++ P +E+ GS Q++
Sbjct: 383 ASQVHNMQIPLSYADAVIGAAGASISYIRRQSGAAVTIQESRGAPGEMTVEIIGSASQVQ 442
Query: 223 QASAMVRELIVRIGP 237
A +++ + P
Sbjct: 443 TAQQLIQNFMAEAAP 457
>gi|255570689|ref|XP_002526299.1| zinc finger protein, putative [Ricinus communis]
gi|223534380|gb|EEF36088.1| zinc finger protein, putative [Ricinus communis]
Length = 311
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 233 FKTELCNKWQETGTCPYGDNCQFAHGIEELR 263
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 34/135 (25%)
Query: 6 RTKPETGIN-ANGVFKKSKHESESGVGS--------KSKPCTKFFSTAGCPFGESCHFLH 56
R+KP++ ++ A+ V+ + + E + K++ C K+ T CP+G++C F H
Sbjct: 198 RSKPQSQLDGAHKVYVRGGQKEEEPLEVEVYNQGMFKTELCNKWQETGTCPYGDNCQFAH 257
Query: 57 YFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCH 116
G + ++ P+ K+ +C + + + C +G +CH
Sbjct: 258 ----GIEELRPVIRHPR---------------------YKTEVCRMVLAGDACPYGHRCH 292
Query: 117 FAHGEWELGKPIAIS 131
F H + + IA S
Sbjct: 293 FRHVLTDHERYIAQS 307
>gi|91090284|ref|XP_971237.1| PREDICTED: similar to a kinase anchor protein [Tribolium castaneum]
gi|270013437|gb|EFA09885.1| hypothetical protein TcasGA2_TC012034 [Tribolium castaneum]
Length = 536
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 151 PPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLR 210
PPP+ A + + SL G +IGK G + I +TGA++ +R H + L+
Sbjct: 219 PPPSRSLVNESTALNIYEFIIPQSLVGKLIGKHGSSVSNIKDKTGAQVLVRKHPTNNKLK 278
Query: 211 NIELEGSFEQIKQASAMVRE 230
+EG+ +I A ++R+
Sbjct: 279 VCSIEGTRTEIDSALKLIRD 298
>gi|431922364|gb|ELK19455.1| Far upstream element-binding protein 2 [Pteropus alecto]
Length = 709
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 392 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQ 451
Query: 227 MVRELI 232
++ E I
Sbjct: 452 LIEEKI 457
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 105 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 164
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 165 KAKMMLDDIVSR 176
>gi|395534454|ref|XP_003769256.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Sarcophilus
harrisii]
Length = 733
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+D+S+ GA+IG+GG K+I TG+K+ I + + R + G+ E K A M+ E
Sbjct: 165 LDSSVVGAVIGRGGAKIKEIQESTGSKIQIIKGDLESETR---IYGNKENQKSAKLMIEE 221
Query: 231 LIVRI 235
++ +I
Sbjct: 222 IVKKI 226
>gi|324533465|gb|ADY49308.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 182
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
A + +++ L G IIGKGG +I ++GA + + + + + R I + GS QI+
Sbjct: 88 AIISHTVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQPN-SERIITISGSHAQIQ 146
Query: 223 QASAMVRELIVR 234
A ++++ IVR
Sbjct: 147 TAQYLLQQWIVR 158
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T ++++ LAG+IIGKGG QI +GA + I + N R I ++G+ EQI+ A
Sbjct: 355 TTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGTPEQIQNA 414
Query: 225 SAMVRELI 232
+++ +
Sbjct: 415 QYLLQNRV 422
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G S+ A G +IGKGG K I +Q+GA + ++ + DPN+R + G+
Sbjct: 356 GGLQEVTYSIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSIRGTH 415
Query: 219 EQIKQASAMVRELI 232
+Q++ A ++ E I
Sbjct: 416 QQMEMARQLIDEKI 429
>gi|148706278|gb|EDL38225.1| mCG140911, isoform CRA_b [Mus musculus]
Length = 773
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 455 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAK 514
Query: 226 AMVRELI 232
++ E I
Sbjct: 515 QLIEEKI 521
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 169 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 228
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 229 KAKMMLDDIVSR 240
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNI 212
P PG AA G T +I + + GAIIGKGG +I + +G+ + I + + + N R +
Sbjct: 399 PMPGGAAVPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLV 458
Query: 213 ELEGSFEQIKQASAMV 228
+ G+ E + A M+
Sbjct: 459 TITGTEECNRMALYML 474
>gi|532796|gb|AAA62666.1| DTIS11 protein [Drosophila melanogaster]
Length = 437
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 134 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 169
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 126 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 166
>gi|441629120|ref|XP_003281628.2| PREDICTED: far upstream element-binding protein 2-like [Nomascus
leucogenys]
Length = 805
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 513 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 572
Query: 226 AMVRELI 232
++ E I
Sbjct: 573 QLIEEKI 579
>gi|212720819|ref|NP_001131407.1| uncharacterized protein LOC100192736 [Zea mays]
gi|194691442|gb|ACF79805.1| unknown [Zea mays]
Length = 361
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD+C FAHG AELR
Sbjct: 286 LKTELCNKWEETGACPYGDQCQFAHGVAELR 316
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H VA++ P P
Sbjct: 287 KTELCNKWEETGACPYGDQCQFAH-------GVAELR-----------------PVIRHP 322
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C + + E C +G +CHF H
Sbjct: 323 RY-KTQVCRMVLAGEVCPYGHRCHFRH 348
>gi|145514892|ref|XP_001443351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410729|emb|CAK75954.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
+S +KT+LC +F + G C RC FAHG ELR+ A
Sbjct: 10 NSKYKTQLCRHFTQNGVCALAIRCQFAHGPQELRQNA 46
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPS-RNMAVPPPASNG 91
K++ C F C C F H G + Q PQ+ P + + A
Sbjct: 14 KTQLCRHFTQNGVCALAIRCQFAH----GPQELRQNAQQPQSFPEQTIQTNAFNKVQGIN 69
Query: 92 PTVV--KSRMCNRLNSAEG-CKFGDKCHFAHGEWELG 125
P +V K+++C N G CK G C FAHGE EL
Sbjct: 70 PMIVNYKTQLCKHFNPQTGQCKNGPTCTFAHGENELN 106
>gi|443694783|gb|ELT95833.1| hypothetical protein CAPTEDRAFT_50343, partial [Capitella teleta]
Length = 70
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +KT+LC F + G C +GD+C FAHG AELR
Sbjct: 1 SSRYKTELCRPFEENGFCKYGDKCQFAHGEAELR 34
>gi|24641593|ref|NP_511141.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|442616128|ref|NP_001259490.1| Tis11 homolog, isoform C [Drosophila melanogaster]
gi|76803822|sp|P47980.2|TIS1_DROME RecName: Full=Protein TIS11; AltName: Full=dTIS11
gi|22832153|gb|AAF48194.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|189182164|gb|ACD81858.1| LD36337p [Drosophila melanogaster]
gi|440216705|gb|AGB95332.1| Tis11 homolog, isoform C [Drosophila melanogaster]
Length = 436
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 133 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 168
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 125 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 165
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T ++++ LAGAIIGKGG +++ +GA ++I + + N R I + G QI+ A
Sbjct: 408 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 467
Query: 225 SAMVRE 230
++++
Sbjct: 468 QYLLQQ 473
>gi|312067348|ref|XP_003136700.1| KH domain-containing protein [Loa loa]
Length = 571
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQ 220
G + ++ V + G IIGKGG K++ ++GAK+ + D + R ++G+ EQ
Sbjct: 207 GQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQ 266
Query: 221 IKQASAMVRELIVRIGPA 238
I +A+ + EL+ + G A
Sbjct: 267 IAKATQFISELVKKSGAA 284
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 236
G +IG+GG QI QT ++ + N+R L+GS + +A AM+ E+I R G
Sbjct: 47 GNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARAG 106
>gi|154334434|ref|XP_001563464.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060485|emb|CAM42032.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 803
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ +C EGC FG+KC FAHGE EL
Sbjct: 12 PSKYKTSICTFFRREEGCPFGEKCAFAHGEDEL 44
>gi|145518297|ref|XP_001445026.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412459|emb|CAK77629.1| unnamed protein product [Paramecium tetraurelia]
Length = 284
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT LC ++ G+C+ G RCHFAHG ELR
Sbjct: 13 YKTSLCKHWTTTGNCSIGSRCHFAHGERELR 43
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 82 MAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
M VPP + K+ +C + C G +CHFAHGE EL P
Sbjct: 3 MMVPPQMNPK---YKTSLCKHWTTTGNCSIGSRCHFAHGERELRNP 45
>gi|52548270|gb|AAU82119.1| POS-1 [Caenorhabditis remanei]
Length = 261
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAKG-SCTFGDRCHFAHGAAELR 286
FKT LC ++ + +C++GD+C FAHG ELR
Sbjct: 101 FKTALCDSYKRNQTCSYGDQCRFAHGVHELR 131
>gi|170068665|ref|XP_001868953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864657|gb|EDS28040.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC F + G C +GD+C FAHG ELR
Sbjct: 7 YKTELCRPFEEAGECKYGDKCQFAHGMQELR 37
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 96 KSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
K+ +C A CK+GDKC FAHG EL
Sbjct: 8 KTELCRPFEEAGECKYGDKCQFAHGMQEL 36
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
+KT+LC F + G C +G RCHF H A E R
Sbjct: 45 YKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 75
>gi|148674926|gb|EDL06873.1| mCG121849, isoform CRA_d [Mus musculus]
Length = 261
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 149 YEPPPAPGPAASF-----------GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
YEP G S+ G T ++++ LAG+IIGKGG KQI ++GA
Sbjct: 158 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 217
Query: 198 LSIRDHEADPNLRNIELEGSFEQIKQASAMVR 229
+ I + + I + G+ +QI+ A +++
Sbjct: 218 IKIDEPLEGSEDQIITITGTQDQIQNAQYLLQ 249
>gi|366990107|ref|XP_003674821.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
gi|342300685|emb|CCC68448.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
Length = 376
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 270 YKTELCESFTTKGHCKYGNKCQFAHGLHELK 300
>gi|323353988|gb|EGA85841.1| Tis11p [Saccharomyces cerevisiae VL3]
Length = 333
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KGSC +G +C FAHG EL+
Sbjct: 170 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 200
>gi|308496473|ref|XP_003110424.1| CRE-POS-1 protein [Caenorhabditis remanei]
gi|308243765|gb|EFO87717.1| CRE-POS-1 protein [Caenorhabditis remanei]
Length = 261
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAKG-SCTFGDRCHFAHGAAELR 286
FKT LC ++ + +C++GD+C FAHG ELR
Sbjct: 101 FKTALCDSYKRNQTCSYGDQCRFAHGVHELR 131
>gi|663198|emb|CAA57066.1| TIScc1 [Drosophila melanogaster]
gi|1093615|prf||2104281A cc1 gene
Length = 436
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 133 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 168
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 125 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 165
>gi|74224349|dbj|BAE33750.1| unnamed protein product [Mus musculus]
Length = 748
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|380012793|ref|XP_003690459.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Apis
florea]
Length = 443
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T ++++ LAGAIIGKGG +++ +GA ++I + + N R I + G QI+ A
Sbjct: 369 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 428
Query: 225 SAMVRELI 232
++++ +
Sbjct: 429 QYLLQQSV 436
>gi|359322253|ref|XP_542140.4| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Canis lupus familiaris]
Length = 840
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 558 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 617
Query: 226 AMVRELI 232
++ E I
Sbjct: 618 QLIEEKI 624
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 272 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 331
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 332 KAKMMLDDIVSR 343
>gi|355778689|gb|EHH63725.1| hypothetical protein EGM_16749 [Macaca fascicularis]
Length = 338
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 113 SRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P+ K+ +C CK+GDKC FAHG EL
Sbjct: 112 PSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 144
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI V S G +IGK G + + +GAK+ I +D EAD N R +EL G+ + +A
Sbjct: 147 KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSVDKA 206
Query: 225 SAMVRELIVR 234
+++ +I
Sbjct: 207 EQLIKSVIAE 216
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 352 GGVQEITYTVPADKCGLVIGKGGDNIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIP 411
Query: 219 EQIKQASAMVRELI 232
+QI+ A ++ E +
Sbjct: 412 QQIEVARHLIDEKV 425
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|348550680|ref|XP_003461159.1| PREDICTED: far upstream element-binding protein 2 [Cavia porcellus]
Length = 718
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 400 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 459
Query: 226 AMVRELI 232
++ E I
Sbjct: 460 QLIEEKI 466
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 114 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 173
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 174 KAKMMLDDIVSR 185
>gi|167378199|ref|XP_001734711.1| tristetraproline [Entamoeba dispar SAW760]
gi|165903659|gb|EDR29114.1| tristetraproline, putative [Entamoeba dispar SAW760]
Length = 211
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC +F + G+C +G++C FAHG ELR
Sbjct: 103 TSLYKTELCRSFVETGTCRYGNKCQFAHGEKELR 136
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQA 74
K++ C F T C +G C F+H PG + V+ +++PQ
Sbjct: 145 KTEICQTFHQTGTCKYGSRCRFIHVLPGEPSPVSDCVDIPQT 186
>gi|345320294|ref|XP_001520726.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2-like, partial [Ornithorhynchus anatinus]
Length = 652
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 350 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 409
Query: 226 AMVRELI 232
++ E I
Sbjct: 410 QLIEEKI 416
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 147 GRYEPPPAPGPAASFGASATAK-ISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRDHE 204
GR PP A+ G + T + I + A AG +IGKGG KQ+ + G K+ I+D
Sbjct: 136 GRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGS 195
Query: 205 ADPNL-RNIELEGSFEQIKQASAMVRELI 232
+ N+ + + + G +++QA MV +++
Sbjct: 196 QNTNVDKPLRIIGDHYKVQQACEMVMDIL 224
>gi|344237643|gb|EGV93746.1| Far upstream element-binding protein 2 [Cricetulus griseus]
Length = 593
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 276 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQ 335
Query: 227 MVRELI 232
++ E I
Sbjct: 336 LIEEKI 341
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQA 224
KI V S G +IGK G + + +GAK+ I +D EAD N R +EL G+ + +A
Sbjct: 147 KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSVDKA 206
Query: 225 SAMVRELIVR 234
+++ +I
Sbjct: 207 EQLIKSVIAE 216
>gi|348529734|ref|XP_003452368.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Oreochromis niloticus]
Length = 419
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + GSC +G++C FAHG ELR
Sbjct: 126 STRYKTELCRPFEENGSCKYGEKCQFAHGYHELR 159
>gi|342321565|gb|EGU13498.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]
Length = 815
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 255 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
S +KT+LC ++ KG+C +G +C FAHG ELR+ A
Sbjct: 498 SLYKTELCRSWEEKGNCRYGVKCQFAHGIQELREVA 533
>gi|163954948|ref|NP_034743.3| far upstream element-binding protein 2 [Mus musculus]
gi|341940718|sp|Q3U0V1.2|FUBP2_MOUSE RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP
Length = 748
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 32/63 (50%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T +I V S AIIGKGG KQ+ TGAK+ I E N R I + G FE I +
Sbjct: 109 TCRIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSREDGLNERIISIIGPFESISDTA 168
Query: 226 AMV 228
V
Sbjct: 169 IKV 171
>gi|24641595|ref|NP_727633.1| Tis11 homolog, isoform B [Drosophila melanogaster]
gi|22832154|gb|AAN09314.1| Tis11 homolog, isoform B [Drosophila melanogaster]
Length = 408
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 105 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 140
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 97 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 137
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + G+ +QI A ++ E I
Sbjct: 446 GLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQLIEEKI 504
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 156 GPAASFGASATAK------ISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRDHEADPN 208
GP + F S+ + I + A AG IIGKGG KQ+ + G K+ I+D + N
Sbjct: 225 GPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTN 284
Query: 209 L-RNIELEGSFEQIKQASAMVRELI 232
+ + + + G +++QA MV +L+
Sbjct: 285 MDKPLRIVGEPFKVQQACEMVMDLL 309
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
+S T + V + G IIG+GG +I +++G K+ I R + L GS + ++
Sbjct: 150 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQ 209
Query: 223 QASAMVRELIVR 234
A ++ +++ R
Sbjct: 210 NAKMLLDDIVAR 221
>gi|313212740|emb|CBY36671.1| unnamed protein product [Oikopleura dioica]
Length = 324
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEAD--PNLRNIELEGSFEQIKQASAMV 228
V AS AG +IGKGG N + I +GA + I + +D N + + G+ +QI++A ++
Sbjct: 10 VPASRAGVVIGKGGENIRLIKENSGAFVQIEKNASDKGDNWKTFIIRGTEQQIQEAQKLI 69
Query: 229 RELIVRIGPAHAKNPATAGSAAHPLS 254
++ IGP P T A+H +
Sbjct: 70 QDK-AGIGP-----PNTHTQASHSMD 89
>gi|426197247|gb|EKV47174.1| hypothetical protein AGABI2DRAFT_221059 [Agaricus bisporus var.
bisporus H97]
Length = 1238
Score = 41.6 bits (96), Expect = 0.37, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K +V + I+G+GG + +I TGA + I DPN NI + G+ E I A A
Sbjct: 808 KFAVPSRAIARILGRGGASINEIKDLTGAIVDIDKSSDDPNTTNISVRGTKEAINDAKAQ 867
Query: 228 VRELIVRIG 236
+ E+ +G
Sbjct: 868 IMEIANSVG 876
>gi|391331395|ref|XP_003740132.1| PREDICTED: uncharacterized protein LOC100906834 [Metaseiulus
occidentalis]
Length = 679
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 173 ASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQ-IKQASAMVRE 230
A L G +IG+ G N K I +TGA +++R H D +L+ + + G E+ +K A A +R+
Sbjct: 356 ADLCGRLIGRHGANVKDIRDRTGAIVTVRPHPIDISLKQVYVVGKLEESVKLAMAEIRK 414
>gi|195352688|ref|XP_002042843.1| GM11580 [Drosophila sechellia]
gi|194126890|gb|EDW48933.1| GM11580 [Drosophila sechellia]
Length = 431
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
+S +KT+LC F + G C +G++C FAHG+ ELR
Sbjct: 134 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNV 169
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 126 LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 166
>gi|183232062|ref|XP_652977.2| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|169802218|gb|EAL47591.2| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042890|gb|EKE41602.1| zinc finger protein, putative [Entamoeba nuttalli P19]
gi|449705641|gb|EMD45650.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 212
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC +F + G+C +G++C FAHG ELR
Sbjct: 104 TSLYKTELCRSFVETGTCRYGNKCQFAHGEKELR 137
>gi|47223865|emb|CAG06042.1| unnamed protein product [Tetraodon nigroviridis]
Length = 692
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
SV A G +IG+GG N K I +QTGA + + DPN + + GS +QI A
Sbjct: 431 SVPAHKCGLVIGRGGENVKSINQQTGAFVKMTHQPPPNGDPNFKLFTIRGSPQQIDHAKQ 490
Query: 227 MVRELI 232
++ E I
Sbjct: 491 LIEEKI 496
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 160 SFGASA-TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSF 218
S G+SA T + SV ++ G IIG+GG +I +++G K+ A R + L GS
Sbjct: 121 SVGSSALTEECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLPERRVSLTGSP 180
Query: 219 EQIKQASAMVRELIVR 234
+ I++A A++ +++ R
Sbjct: 181 DAIQRAKALIDDIVSR 196
>gi|297743404|emb|CBI36271.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT+LC F G+C GD C+FAHG ++R+
Sbjct: 72 FKTQLCMKFRLGTCINGDECNFAHGTGDIRR 102
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 59/217 (27%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPP 152
T K+++C + C GD+C+FAHG ++ +P+
Sbjct: 70 TFFKTQLCMKFRLGT-CINGDECNFAHGTGDIRRPLP----------------------- 105
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK-QICRQTGAKLSIRDHEADPNLRN 211
G + K + +AG +NSK ++CR + R + R
Sbjct: 106 --------HGQELSCK---EGYVAGIWNRDHRLNSKMKLCR-----IFSRGEKCPYGERC 149
Query: 212 IELEGSFEQIKQASAMVRELI-VRIGPAHAKNPATAGSA-------------AHPLSSN- 256
L FE+ ++ S RE + IG + GS A+ +++N
Sbjct: 150 NFLHEGFEKCREGSGRFRESSSISIGCTGSARGYRNGSGQLEFKRFGDSSLNANQVNANP 209
Query: 257 --FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
++T+LC + G+C + ++C FAHG AELRK A+
Sbjct: 210 GFWRTRLCHKWEMSGNCAYREKCVFAHGQAELRKHAV 246
>gi|409080346|gb|EKM80706.1| hypothetical protein AGABI1DRAFT_55738 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1238
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K +V + I+G+GG + +I TGA + I DPN NI + G+ E I A A
Sbjct: 808 KFAVPSRAIARILGRGGASINEIKDLTGAIVDIDKSSDDPNTTNISVRGTKEAINDAKAQ 867
Query: 228 VRELIVRIG 236
+ E+ +G
Sbjct: 868 IMEIANSVG 876
>gi|344302417|gb|EGW32691.1| hypothetical protein SPAPADRAFT_60049 [Spathaspora passalidarum
NRRL Y-27907]
Length = 353
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 238 AHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
AH K ++ + L +KT+LC +F K G C +G++C FAHG EL+
Sbjct: 273 AHMKTNVSSATVNTQL---YKTELCASFMKMGICPYGNKCQFAHGENELK 319
>gi|341892767|gb|EGT48702.1| CBN-CCCH-1 protein [Caenorhabditis brenneri]
Length = 465
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
H GG + + + P + P N AVPPP + P + K+ +C C +G++C
Sbjct: 172 HNLIGGTSPFSTPQHTPMSTPV---NGAVPPPKN--PKLYKTELCRSWMDHGRCNYGERC 226
Query: 116 HFAHGEWE 123
+AHGE E
Sbjct: 227 QYAHGEVE 234
>gi|322801544|gb|EFZ22205.1| hypothetical protein SINV_16423 [Solenopsis invicta]
Length = 327
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G + ++++ LAGAIIGKGG ++I +GA ++I + N R I + G QI
Sbjct: 258 GNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGIPSQI 317
Query: 222 KQASAMVRE 230
+ A ++++
Sbjct: 318 QMAQYLLQQ 326
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T ++++ LAGAIIGKGG +++ +GA ++I + + N R I + G QI+ A
Sbjct: 365 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 424
Query: 225 SAMVRE 230
++++
Sbjct: 425 QYLLQQ 430
>gi|167621546|ref|NP_001108061.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Danio rerio]
gi|159155846|gb|AAI54807.1| Zgc:174910 protein [Danio rerio]
Length = 405
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHF 117
+ G AV++ + LP A PAP ++ PP+ G NR S+ G KFG
Sbjct: 8 YDGDGVAVSKQLTLP-AKPAPVKSWR--PPSPRGAR-------NRETSSAGAKFG----- 52
Query: 118 AHGEWELGKPIAISHDDPRAFGAVPGRMGG----RYEPPPAPGPAASFGASATAKISVDA 173
G+ E D F G+ R P + G A G S++ ++V+
Sbjct: 53 --GDGEQWVNWRNRDSDFDVFDGAAGKNNSYSRSRIGPTRSRG-YADRGDSSSVTLNVEN 109
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRD--HEADPNLRNIELEGSFEQIKQASAMVREL 231
SL G IIG+GG +++ +GA + I HEA+ + + GS + +A M+ +L
Sbjct: 110 SLVGRIIGRGGAKIRELQESSGASIKITRGAHEAE-----VLICGSCDAQHKAKDMIEDL 164
Query: 232 I 232
+
Sbjct: 165 V 165
>gi|118357333|ref|XP_001011916.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila]
gi|89293683|gb|EAR91671.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila
SB210]
Length = 459
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
+KT+LC N+ +KG C +G +C FAHG EL
Sbjct: 183 YKTELCKNWVSKGVCQYGQKCRFAHGKEEL 212
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI + GA + I + R I + G+ +QI
Sbjct: 352 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQI 411
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 412 QNAQYLLQ 419
>gi|171847306|gb|AAI61696.1| LOC100158419 protein [Xenopus laevis]
Length = 674
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + G+ +QI A ++ E I
Sbjct: 388 GLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQLIEEKI 446
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 156 GPAASFGASATAK------ISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHEADPN 208
GP + F S+ + I + A AG IIGKGG KQ+ + G K+ I+D + N
Sbjct: 167 GPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTN 226
Query: 209 L-RNIELEGSFEQIKQASAMVRELI 232
+ + + + G +++QA MV +L+
Sbjct: 227 MDKPLRIVGEPFKVQQACEMVMDLL 251
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
+S T + V + G IIG+GG +I +++G K+ I R + L GS + ++
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQ 151
Query: 223 QASAMVRELIVR 234
A ++ +++ R
Sbjct: 152 NAKMLLDDIVAR 163
>gi|355749339|gb|EHH53738.1| hypothetical protein EGM_14430, partial [Macaca fascicularis]
Length = 1012
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K+SV +++ +IG+GG N I TGA + I + R I + G E +QA+ +
Sbjct: 138 KVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 197
Query: 228 VRELI 232
+ LI
Sbjct: 198 INALI 202
>gi|358412988|ref|XP_003582441.1| PREDICTED: far upstream element-binding protein 2-like [Bos taurus]
Length = 841
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 483 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 542
Query: 226 AMVRELI 232
++ E I
Sbjct: 543 QLIEEKI 549
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E +++
Sbjct: 198 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQK 257
Query: 224 ASAMVRELIVR 234
A M+ +++ R
Sbjct: 258 AKMMLDDIVSR 268
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
T ++++ LAGAIIGKGG +++ +GA ++I + + N R I + G QI+ A
Sbjct: 392 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 451
Query: 225 SAMVRELI 232
++++ +
Sbjct: 452 QYLLQQSV 459
>gi|6320355|ref|NP_010435.1| Cth1p [Saccharomyces cerevisiae S288c]
gi|52788259|sp|P47976.2|CTH1_YEAST RecName: Full=mRNA decay factor CTH1; AltName:
Full=Cysteine-three-histidine protein 1
gi|899400|emb|CAA90373.1| unknown [Saccharomyces cerevisiae]
gi|45269273|gb|AAS56016.1| YDR151C [Saccharomyces cerevisiae]
gi|151942135|gb|EDN60491.1| CCCH zinc finger protein [Saccharomyces cerevisiae YJM789]
gi|190404893|gb|EDV08160.1| zinc finger protein CTH1 [Saccharomyces cerevisiae RM11-1a]
gi|256269333|gb|EEU04635.1| Cth1p [Saccharomyces cerevisiae JAY291]
gi|259145391|emb|CAY78655.1| Cth1p [Saccharomyces cerevisiae EC1118]
gi|285811169|tpg|DAA11993.1| TPA: Cth1p [Saccharomyces cerevisiae S288c]
Length = 325
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 205 YKTELCESFTIKGYCKYGNKCQFAHGLNELK 235
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 66 AQMMNLPQAVP-------APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+Q LP +P P R + P T+ K+ +C CK+G+KC FA
Sbjct: 169 SQSTGLPYTLPIQKTTKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFA 228
Query: 119 HGEWEL 124
HG EL
Sbjct: 229 HGLNEL 234
>gi|47212350|emb|CAF93268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
++ +KT+LC F + G+C +G +C FAHG AELR
Sbjct: 135 TNRYKTELCRGFQETGTCKYGSKCQFAHGEAELR 168
>gi|426386866|ref|XP_004059901.1| PREDICTED: far upstream element-binding protein 2 [Gorilla gorilla
gorilla]
Length = 813
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 539 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 597
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 245 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 304
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 305 KAKMMLDDIVSR 316
>gi|393217327|gb|EJD02816.1| hypothetical protein FOMMEDRAFT_107810 [Fomitiporia mediterranea
MF3/22]
Length = 1244
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K +V + I+GKGG N +I +TGA++ I DP + NI G+ + I A A
Sbjct: 814 KFTVPTNSVARILGKGGANINEIKDKTGAQIDIDKSTDDPQITNITCRGTKKAIATAKAD 873
Query: 228 VRELIVRIG 236
++ + ++G
Sbjct: 874 IQAIAEQVG 882
>gi|349577214|dbj|GAA22383.1| K7_Cth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300264|gb|EIW11355.1| Cth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 325
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 205 YKTELCESFTIKGYCKYGNKCQFAHGLNELK 235
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 66 AQMMNLPQAVP-------APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+Q LP +P P R + P T+ K+ +C CK+G+KC FA
Sbjct: 169 SQSTGLPYTLPIQKTTKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFA 228
Query: 119 HGEWEL 124
HG EL
Sbjct: 229 HGLNEL 234
>gi|1020083|gb|AAB39897.1| zinc finger protein [Saccharomyces cerevisiae]
Length = 325
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 205 YKTELCESFTIKGYCKYGNKCQFAHGLNELK 235
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 66 AQMMNLPQAVP-------APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+Q LP +P P R + P T+ K+ +C CK+G+KC FA
Sbjct: 169 SQSTGLPYTLPIQKTTKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFA 228
Query: 119 HGEWEL 124
HG EL
Sbjct: 229 HGLNEL 234
>gi|323305506|gb|EGA59248.1| Cth1p [Saccharomyces cerevisiae FostersB]
gi|323338249|gb|EGA79481.1| Cth1p [Saccharomyces cerevisiae Vin13]
gi|323349278|gb|EGA83506.1| Cth1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355682|gb|EGA87499.1| Cth1p [Saccharomyces cerevisiae VL3]
gi|365766632|gb|EHN08128.1| Cth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 204 YKTELCESFTIKGYCKYGNKCQFAHGLNELK 234
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 66 AQMMNLPQAVP-------APSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFA 118
+Q LP +P P R + P T+ K+ +C CK+G+KC FA
Sbjct: 168 SQSTGLPYTLPIQKTTKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFA 227
Query: 119 HGEWEL 124
HG EL
Sbjct: 228 HGLNEL 233
>gi|297275911|ref|XP_001090850.2| PREDICTED: far upstream element-binding protein 2 [Macaca mulatta]
Length = 686
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 368 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 427
Query: 226 AMVRELI 232
++ E I
Sbjct: 428 QLIEEKI 434
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 82 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 141
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 142 KAKMMLDDIVSR 153
>gi|149028151|gb|EDL83589.1| KH-type splicing regulatory protein, isoform CRA_b [Rattus
norvegicus]
Length = 721
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|149239799|ref|XP_001525775.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449898|gb|EDK44154.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC F K G CT+G +C FAHG EL+
Sbjct: 440 YKTELCAPFMKTGVCTYGTKCQFAHGEQELK 470
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI + GA + I + R I + G+ +QI
Sbjct: 352 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQI 411
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 412 QNAQYLLQ 419
>gi|406701135|gb|EKD04287.1| hypothetical protein A1Q2_01318 [Trichosporon asahii var. asahii
CBS 8904]
Length = 311
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
++ PC F ST+GC G++C F H Q +P P AVP P
Sbjct: 16 RTTPCKWFNSTSGCDAGDACTFQHV---------------QVIP-PEHQSAVPRP----- 54
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 127
+++ C + C+ GD CH+AH + ++ P
Sbjct: 55 --WRTKPCRHFQVGK-CRMGDSCHYAHVKADVPPP 86
>gi|409051356|gb|EKM60832.1| hypothetical protein PHACADRAFT_247008 [Phanerochaete carnosa
HHB-10118-sp]
Length = 710
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC ++ KGSC +G +C FAHG ELR
Sbjct: 402 YKTELCRSWEEKGSCRYGAKCQFAHGEEELR 432
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 58 FPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPT-VVKSRMCNRLNSAEGCKFGDKCH 116
P +A A N QA +P + + P A+N + K+ +C C++G KC
Sbjct: 364 IPSAQSATAVGSNRQQATQSPESSSGLGPNANNRKLGLYKTELCRSWEEKGSCRYGAKCQ 423
Query: 117 FAHGEWEL 124
FAHGE EL
Sbjct: 424 FAHGEEEL 431
>gi|395750296|ref|XP_002828567.2| PREDICTED: far upstream element-binding protein 2 [Pongo abelii]
Length = 757
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 476 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 535
Query: 227 MVRELI 232
++ E I
Sbjct: 536 LIEEKI 541
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 189 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 248
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 249 KAKMMLDDIVSR 260
>gi|342180120|emb|CCC89596.1| putative zinc finger protein 2 [Trypanosoma congolense IL3000]
Length = 128
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C + K G C++GDRC FAHG ELR ++
Sbjct: 79 KTKMCIYWEKNGECSWGDRCAFAHGKGELRMSS 111
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 166 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQAS 225
T ++++ L G IIGKGG +I ++GA + + + + R I + GS QI+ A
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSE-RIITISGSHAQIQTAQ 328
Query: 226 AMVRELIVR 234
++++ IVR
Sbjct: 329 YLLQQWIVR 337
>gi|145509593|ref|XP_001440735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407963|emb|CAK73338.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 23/104 (22%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLH--------YFPGGYNAVAQMMNLPQAVPAPSRN--M 82
K++ C F S C G C F H GY + Q +PA + N
Sbjct: 14 KTQLCRHFTSNGVCALGLRCQFAHGPQELRANSLQAGY--------VEQVIPANNFNKVQ 65
Query: 83 AVPPPASNGPTVVKSRMCNRLNSAEG-CKFGDKCHFAHGEWELG 125
+ P N K+++C N G CK G C FAHGE EL
Sbjct: 66 GINPMVVN----YKTQLCKHFNPQTGQCKNGPTCTFAHGESELN 105
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
+ +KT+LC +F + G C G RC FAHG ELR ++
Sbjct: 10 NQKYKTQLCRHFTSNGVCALGLRCQFAHGPQELRANSL 47
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 252 PLSSNFKTKLCGNF--AKGSCTFGDRCHFAHGAAEL 285
P+ N+KT+LC +F G C G C FAHG +EL
Sbjct: 69 PMVVNYKTQLCKHFNPQTGQCKNGPTCTFAHGESEL 104
>gi|397568787|gb|EJK46344.1| hypothetical protein THAOC_34992 [Thalassiosira oceanica]
Length = 718
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 237 PAHAKNPATAGSAAHPL-------SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
P A +P + A P + FK +LC NF K G C FG C++AHG ELR
Sbjct: 190 PGTAPSPMSVAEAIQPQCFPAKQKAGKFKVELCHNFEKPGGCPFGSSCNYAHGTHELR 247
>gi|334324021|ref|XP_003340472.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Monodelphis domestica]
Length = 993
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+D+S+ GA+IG+GG K+I TG+K+ I +++ R + G+ E K A M+ E
Sbjct: 425 LDSSVVGAVIGRGGTKIKEIQESTGSKIQIIKGDSESETR---IYGNKENQKSAKLMIEE 481
Query: 231 LIVRI 235
++ +I
Sbjct: 482 IVKKI 486
>gi|147799476|emb|CAN68459.1| hypothetical protein VITISV_031450 [Vitis vinifera]
Length = 316
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
FKT+LC F G+C GD C+FAHG ++R+
Sbjct: 72 FKTQLCVKFRLGTCINGDECNFAHGTGDIRR 102
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 59/217 (27%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMGGRYEPP 152
T K+++C + C GD+C+FAHG ++ +P+
Sbjct: 70 TFFKTQLCVKFRLGT-CINGDECNFAHGTGDIRRPLP----------------------- 105
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSK-QICRQTGAKLSIRDHEADPNLRN 211
G + K + +AG +NSK ++CR + R + R
Sbjct: 106 --------HGQELSCK---EGYVAGIWNRDHRLNSKMKLCR-----IFSRGEKCPYGERC 149
Query: 212 IELEGSFEQIKQASAMVRELI-VRIGPAHAKNPATAGSA-------------AHPLSSN- 256
L FE+ ++ S RE + IG + GS A+ +++N
Sbjct: 150 NFLHEGFEKCREGSGKFRESSSISIGCTGSARGYRNGSGQLEFKRFGDSSLNANQVNANP 209
Query: 257 --FKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
++T+LC + G+C + ++C FAHG AELRK A+
Sbjct: 210 GFWRTRLCHKWEMSGNCAYREKCVFAHGQAELRKHAV 246
>gi|440901061|gb|ELR52061.1| Far upstream element-binding protein 2, partial [Bos grunniens
mutus]
Length = 664
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 346 FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAK 405
Query: 226 AMVRELI 232
++ E I
Sbjct: 406 QLIEEKI 412
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 119
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 120 KAKMMLDDIVSR 131
>gi|328704267|ref|XP_001944657.2| PREDICTED: hypothetical protein LOC100162438 [Acyrthosiphon pisum]
Length = 251
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 252 PLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
P+ S +KT++C + K C +GD+C FAHG +LR
Sbjct: 92 PMGSRYKTEMCRQYIEKIKCAYGDKCQFAHGEQDLR 127
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP A G + K+ MC + C +GDKC FAHGE +L
Sbjct: 87 LPPQAPMG-SRYKTEMCRQYIEKIKCAYGDKCQFAHGEQDL 126
>gi|323453475|gb|EGB09346.1| hypothetical protein AURANDRAFT_62907 [Aureococcus anophagefferens]
Length = 584
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 256 NFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+FKT+LC A GSC G RC FAH ELR
Sbjct: 65 HFKTRLCVYLASGSCPHGARCFFAHSVDELR 95
>gi|281206643|gb|EFA80829.1| hypothetical protein PPL_06417 [Polysphondylium pallidum PN500]
Length = 388
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S +KT+LC +FA+ G C +G +C FAHG ELR
Sbjct: 151 SRYKTELCRSFAETGICRYGFKCQFAHGRDELR 183
>gi|149028150|gb|EDL83588.1| KH-type splicing regulatory protein, isoform CRA_a [Rattus
norvegicus]
Length = 729
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|145355703|ref|XP_001422091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582331|gb|ABP00408.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 437
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH----EADPNLRNI 212
P ++ ATA +++ + G IIG+GG N K I +QT A++ I+ E PN R +
Sbjct: 169 PPSARQGPATATMTIPHTKVGMIIGRGGDNVKYIQQQTHARIQIQTDAETPEGAPN-RMV 227
Query: 213 ELEGSFEQIKQASAMVRELIV 233
L G E + A+ ++ ++ +
Sbjct: 228 YLRGPVEACRHAARLINDMCI 248
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 176 AGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+ G + + +TG ++SI D + R +E+EG E+ ++A+ M++ LI
Sbjct: 41 VGLVIGRDGRHVGFVQNRTGTRISIARDSWDGSRRRVEIEGPPERCREAATMIQRLI 97
>gi|444727564|gb|ELW68050.1| Far upstream element-binding protein 1 [Tupaia chinensis]
Length = 587
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 116 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 175
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 176 KPLR---ITGDPYKVQQAKEMVLELI 198
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 177 GAIIGKG-GVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKG G K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 332 GLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 391
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNI 212
P PG A GA T +I + + GAIIGKGG +I + +G+ + I + + + N R +
Sbjct: 396 PMPGAAHVPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLV 455
Query: 213 ELEGSFEQIKQASAMV 228
+ G+ E + A M+
Sbjct: 456 TITGTEECNRMALYML 471
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 139 GAVPGRMGGRYEPPPAPG-PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAK 197
G PG Y+PP APG P S T + + + GAIIG G + + I R +GA
Sbjct: 317 GMYPGSSYPMYQPPTAPGVPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGAS 376
Query: 198 LSIRDHEADPNL-----RNIELEGSFEQIKQASAMVRE 230
+ I EAD L R + + G+ E +A ++ E
Sbjct: 377 VKIAPLEADKPLEQQTERKVTIVGTPEAQWKAQYLIFE 414
>gi|402471238|gb|EJW05085.1| hypothetical protein EDEG_00798 [Edhazardia aedis USNM 41457]
Length = 293
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT++C N+ G C +GD+C FAH ELR
Sbjct: 47 FKTEMCRNYEDTGFCKYGDKCQFAHNKNELR 77
>gi|354479313|ref|XP_003501856.1| PREDICTED: far upstream element-binding protein 2-like [Cricetulus
griseus]
Length = 639
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 356 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 414
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 62 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 121
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 122 KAKMMLDDIVSR 133
>gi|348686124|gb|EGZ25939.1| hypothetical protein PHYSODRAFT_555547 [Phytophthora sojae]
Length = 778
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 249 AAHPLSSNFKTKLCGNFAKGSCTFG-DRCHFAHGAAELR 286
AA P ++KT+LC F KG+C + + C FAHG ++LR
Sbjct: 575 AATPRLQSYKTELCYYFLKGNCNYTKEECRFAHGQSDLR 613
>gi|229594299|ref|XP_001024423.3| zinc finger protein, putative [Tetrahymena thermophila]
gi|225566950|gb|EAS04178.3| zinc finger protein, putative [Tetrahymena thermophila SB210]
Length = 257
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 219 EQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHF 278
EQ+K+ + + A+ A + S + + +KT LC N+ C CHF
Sbjct: 3 EQVKEINTAAAANAETLSQGSAEGSAASTSNSEIPNPKYKTALCRNYLNSQCNRNSGCHF 62
Query: 279 AHGAAELR 286
AHG+ ELR
Sbjct: 63 AHGSEELR 70
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+ C + ++ C CHF H AV++ N V + + P SN P
Sbjct: 42 KTALCRNYLNSQ-CNRNSGCHFAH-GSEELRAVSENSNFFAEVEKSNTDYLSKWP-SNIP 98
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
T K+ +C CK+ C+FAHG+ E
Sbjct: 99 TNYKTTLCKFYEQVGTCKYDQNCNFAHGDHE 129
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 171 VDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 230
+ S A IIGKGG N QI R +GAK ++ D+ R + + G + + +A
Sbjct: 133 IGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFG---- 188
Query: 231 LIVR-IGPAHAKNPATAGSAAHPLSSNFKTKLCGNF 265
LIVR + + P+T+ S A+P+ L G+
Sbjct: 189 LIVRTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSI 224
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 152 PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN 211
PP P + G T +I + + GAIIGKGG +I + +G+ + I + + N R
Sbjct: 400 PPNQPPVSMPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERL 459
Query: 212 IELEGSFE 219
+ + G+ E
Sbjct: 460 VTITGTQE 467
>gi|440898065|gb|ELR49638.1| Far upstream element-binding protein 1 [Bos grunniens mutus]
Length = 675
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 204 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 263
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 264 KPLR---ITGDPYKVQQAKEMVLELI 286
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 176 AGAIIGKG-GVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVREL 231
G IIGKG G K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E
Sbjct: 419 TGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 478
Query: 232 I 232
I
Sbjct: 479 I 479
>gi|148706277|gb|EDL38224.1| mCG140911, isoform CRA_a [Mus musculus]
Length = 765
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 474 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 532
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 180 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 239
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 240 KAKMMLDDIVSR 251
>gi|432101996|gb|ELK29816.1| Far upstream element-binding protein 2, partial [Myotis davidii]
Length = 664
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 347 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 406
Query: 227 MVRELI 232
++ E I
Sbjct: 407 LIEEKI 412
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 119
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 120 KAKMMLDDIVSR 131
>gi|428173065|gb|EKX41970.1| hypothetical protein GUITHDRAFT_51698, partial [Guillardia theta
CCMP2712]
Length = 67
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
+KT++C NF A G C FGD+C+FAHG ELR
Sbjct: 1 YKTQMCKNFEAHGFCGFGDKCNFAHGKEELR 31
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 238 AHAKNPATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAH 280
AH K +G A + +FKT+LC FA KG C +GD C +AH
Sbjct: 24 AHGKEELRSGGRAPSDTRHFKTRLCKTFALKGKCPYGDNCTYAH 67
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
+ T +I V S AIIGKGG KQ+ TG K+ I + E R I + G FE IK
Sbjct: 105 TYTCRIVVPKSAVSAIIGKGGYQIKQLQNITGTKIQISNREYGLYERIITIVGPFESIKD 164
Query: 224 ASAMV 228
+ V
Sbjct: 165 TATKV 169
>gi|19424312|ref|NP_598286.1| far upstream element-binding protein 2 [Rattus norvegicus]
gi|37078084|sp|Q99PF5.1|FUBP2_RAT RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=MAP2 RNA trans-acting protein 1; Short=MARTA1
gi|12584134|gb|AAG59811.1|AF308818_1 MAP2 RNA trans-acting protein MARTA1 [Rattus norvegicus]
Length = 721
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|355697562|gb|AES00713.1| KH-type splicing regulatory protein [Mustela putorius furo]
Length = 663
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 347 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 406
Query: 227 MVRELI 232
++ E I
Sbjct: 407 LIEEKI 412
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 119
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 120 KAKMMLDDIVSR 131
>gi|347967294|ref|XP_308023.5| AGAP002166-PA [Anopheles gambiae str. PEST]
gi|333466362|gb|EAA45539.5| AGAP002166-PA [Anopheles gambiae str. PEST]
Length = 576
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 151 PPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLR 210
PP + GP+ + T + V A L ++GK G KQI ++TGA + I+ + N +
Sbjct: 271 PPHSVGPSVT-----TYEFLVPAFLVAGMLGKQGTFVKQIKQKTGANVIIKRNPDTHNSK 325
Query: 211 NIELEGSFEQIKQASAMVRE 230
LEGS ++I+ A A++R+
Sbjct: 326 ICTLEGSQQEIQDALAVIRK 345
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
+ T ++SV + GAI+G+ GV Q+ +++ A + I E R I + G+ EQI+
Sbjct: 278 TTTTQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITGTPEQIQN 337
Query: 224 ASAMVRELIVRIGPAHAKNP 243
A +++ + + + + NP
Sbjct: 338 AQFLLQMWKILVSCSSSTNP 357
>gi|115313847|gb|AAI24447.1| Zgc:162730 protein [Danio rerio]
Length = 335
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 221 IKQASAM-VRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHF 278
IK +M + + R+ P P A S+ +KT+LC +F + GSC +G +C F
Sbjct: 75 IKADRSMSLNDSFSRMKPHDVPPPPGFPPLATLPSNRYKTELCRSFQEHGSCKYGAKCQF 134
Query: 279 AHGAAELR 286
AHG ELR
Sbjct: 135 AHGENELR 142
>gi|50286627|ref|XP_445742.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525048|emb|CAG58661.1| unnamed protein product [Candida glabrata]
Length = 453
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC F KG C +G++C FAHG EL+
Sbjct: 340 YKTELCETFTTKGFCKYGNKCQFAHGLQELK 370
>gi|410950239|ref|XP_004001515.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Felis catus]
Length = 667
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 350 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 409
Query: 227 MVRELI 232
++ E I
Sbjct: 410 LIEEKI 415
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 63 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 122
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 123 KAKMMLDDIVSR 134
>gi|410927364|ref|XP_003977119.1| PREDICTED: uncharacterized protein LOC101065621 [Takifugu rubripes]
Length = 415
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
++ +KT+LC F + G+C +G +C FAHG AELR
Sbjct: 145 TNRYKTELCRGFQETGTCKYGSKCQFAHGEAELR 178
>gi|72386487|ref|XP_843668.1| zinc finger protein 2 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175784|gb|AAX69912.1| zinc finger protein 2, putative [Trypanosoma brucei]
gi|70800200|gb|AAZ10109.1| zinc finger protein 2, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 130
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C + K G C++GDRC FAHG ELR +
Sbjct: 80 KTKMCIYWEKNGECSWGDRCAFAHGPGELRASV 112
>gi|417412327|gb|JAA52553.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 689
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 379 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 437
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 85 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 144
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 145 KAKMMLDDIVSR 156
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRMFTIRGIPQQIEVARH 419
Query: 227 MVRELI 232
++ E +
Sbjct: 420 LIDEKV 425
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|281349073|gb|EFB24657.1| hypothetical protein PANDA_011323 [Ailuropoda melanoleuca]
Length = 568
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 85 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 144
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 145 KPLR---ITGDPYKVQQAKEMVLELI 167
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 176 AGAIIGKG-GVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVREL 231
G IIGKG G K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E
Sbjct: 300 TGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 359
Query: 232 I 232
I
Sbjct: 360 I 360
>gi|149716720|ref|XP_001496194.1| PREDICTED: far upstream element-binding protein 2 [Equus caballus]
Length = 667
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 350 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 409
Query: 227 MVRELI 232
++ E I
Sbjct: 410 LIEEKI 415
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 63 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 122
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 123 KAKMMLDDIVSR 134
>gi|149590799|ref|XP_001521042.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-B-like
[Ornithorhynchus anatinus]
Length = 345
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 125 STRYKTELCRPFEESGACKYGDKCQFAHGFHELR 158
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
T K+ +C + CK+GDKC FAHG EL
Sbjct: 126 TRYKTELCRPFEESGACKYGDKCQFAHGFHEL 157
>gi|119589502|gb|EAW69096.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_b [Homo sapiens]
Length = 747
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 203 KAKMMLDDIVSR 214
>gi|401624673|gb|EJS42725.1| tis11p [Saccharomyces arboricola H-6]
Length = 289
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 243 PATAGSAAHPLSSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
P G +KT+LC +F KG+C +G +C FAHG EL+
Sbjct: 156 PKVKGQLQETPKQLYKTELCESFTLKGTCPYGTKCQFAHGLNELK 200
>gi|395850961|ref|XP_003798040.1| PREDICTED: far upstream element-binding protein 2 [Otolemur
garnettii]
Length = 712
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 438 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 496
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 204 KAKMMLDDIVSR 215
>gi|375267378|emb|CCD28139.1| zinc finger-containing protein, partial [Plasmopara viticola]
Length = 306
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 249 AAHPLSSNFKTKLCGNFAKGSCTFG-DRCHFAHGAAELR 286
A P ++KT+LC F KG+C + D C FAHG ++LR
Sbjct: 110 ATTPRLQSYKTELCYYFLKGNCNYSKDECRFAHGQSDLR 148
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 126 KPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGV 185
KP +S DD A G++ GR + G ++ G +T ++ + S +I+G GGV
Sbjct: 418 KPKYLSFDDELVQTA--GQIHGRED---YRGLTSATGFLSTIELRIPNSSLESIVGVGGV 472
Query: 186 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
N +I + +GA+L + + A + +E++G+ E+ K A ++++ I
Sbjct: 473 NLAEIRQISGARLRLHEAHAGSSESVVEIQGTLEEAKAAQSLLQGFI 519
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 127 PIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAAS---FGASATAKISVD----ASLAGAI 179
PI + H++P +P P P P S + + T + S+ + L G++
Sbjct: 253 PILLQHENP----MLPHLHSDHPPPIPLLDPYRSGLQYHVTETEEFSIRILCASELIGSV 308
Query: 180 IGKGGVNSKQICRQTGAKLSIRDHEAD 206
IGK G N K++ +QTGA++ +++ + D
Sbjct: 309 IGKSGANVKRVEQQTGARIKVQEIDKD 335
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQAS 225
+V G IIGKGG K I +Q+GA++ ++ + +DP+++ + GS +QI A
Sbjct: 367 FTVPTVKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPSIKMFTVRGSPQQIDYAR 426
Query: 226 AMVRELI 232
+V E I
Sbjct: 427 QLVEEKI 433
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 126 KPIAISHDDPRAFGAVPGRMGGRYEPPPAPGPAASFGASATAKISVDASLAGAIIGKGGV 185
K +A S +F A+ G MGG PP S + + V + G IIG+GG
Sbjct: 67 KKVATSDGKLLSFSAI-GGMGG----PPR---------SVSEEFKVPDGMVGFIIGRGGE 112
Query: 186 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGPAHAKNP 243
++ +++G K+ I R++ L G E I+ A ++ E++ + PA A NP
Sbjct: 113 QISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPESIQTAKRLLTEIVEKGRPAPAFNP 170
>gi|358348811|ref|XP_003638436.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355504371|gb|AES85574.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 139
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT+LC + + G+C +GD C FAHG ELR
Sbjct: 56 FKTELCNKWQETGTCPYGDHCQFAHGIGELR 86
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 27/106 (25%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 57 KTELCNKWQETGTCPYGDHCQFAH----GIGELRPVIRHPRY------------------ 94
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAF 138
K+ +C + + C +G +CHF H E K A+S PR+
Sbjct: 95 ---KTEVCRMVLAGVVCPYGHRCHFRHALTEQEK--AMSQPKPRSM 135
>gi|350580630|ref|XP_003123158.3| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa]
Length = 747
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 203 KAKMMLDDIVSR 214
>gi|145507218|ref|XP_001439564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406759|emb|CAK72167.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 258 KTKLCGNFA-KGSCTFGDRCHFAHGAAEL 285
KT+LC NF KGSC FG C +AHG +EL
Sbjct: 59 KTELCKNFTLKGSCKFGKECSYAHGCSEL 87
>gi|149241962|pdb|2HH2|A Chain A, Solution Structure Of The Fourth Kh Domain Of Ksrp
Length = 107
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 12 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 71
Query: 227 MVRELI 232
++ E I
Sbjct: 72 LIEEKI 77
>gi|341885390|gb|EGT41325.1| CBN-MEX-1 protein [Caenorhabditis brenneri]
Length = 501
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT LC F + GSC +G+ C FAHG ELR
Sbjct: 156 FKTALCDAFKRNGSCPYGESCRFAHGENELR 186
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+ C F CP+GESC F H G N + +P+ R A P
Sbjct: 157 KTALCDAFKRNGSCPYGESCRFAH----GENEL--------RMPSQPRGKAHPK------ 198
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C++ ++ C +G +C F H
Sbjct: 199 --YKTQLCDKFSTYGQCPYGPRCQFIH 223
>gi|145505017|ref|XP_001438475.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405647|emb|CAK71078.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 206 DPNLRNIELE-GSFEQIK--QASAMVRELIVRIG--PAHAK--NPATAGSAAHPLSSNFK 258
+ N +NI+LE + QI+ Q S E IG P K N + K
Sbjct: 2 EHNFKNIKLEIDHYIQIQFDQCSTDEEEKEFEIGVKPNKKKFNNSLEKKQFIEEYTKKKK 61
Query: 259 TKLCGNFA-KGSCTFGDRCHFAHGAAEL 285
T+LC NF GSC FG C +AHG +EL
Sbjct: 62 TELCKNFTLTGSCKFGSNCSYAHGQSEL 89
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 153 PAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNI 212
P PG A GA T +I + + GAIIGKGG +I + +G+ + I + + + N R +
Sbjct: 396 PMPGGAGMPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLV 455
Query: 213 ELEGSFE 219
+ G+ E
Sbjct: 456 TITGTEE 462
>gi|302694935|ref|XP_003037146.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
gi|300110843|gb|EFJ02244.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
Length = 735
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC ++ KG+C +G +C FAHG ELR
Sbjct: 433 YKTELCRSWEEKGTCRYGAKCQFAHGEEELR 463
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 88 ASNGPT-------VVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+SNGP+ + K+ +C C++G KC FAHGE EL
Sbjct: 419 SSNGPSANNRKLGLYKTELCRSWEEKGTCRYGAKCQFAHGEEEL 462
>gi|118779804|ref|XP_309752.3| AGAP010954-PA [Anopheles gambiae str. PEST]
gi|116131343|gb|EAA05601.3| AGAP010954-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC + + G C +GD+C FAHG ELR
Sbjct: 87 TSRYKTELCRPYEEAGECKYGDKCQFAHGMQELR 120
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
R + P P + K+ +C A CK+GDKC FAHG EL
Sbjct: 75 RTQSEPLPQQVNTSRYKTELCRPYEEAGECKYGDKCQFAHGMQEL 119
>gi|444705919|gb|ELW47297.1| Thyroid adenoma-associated protein [Tupaia chinensis]
Length = 2301
Score = 41.2 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 1888 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 1921
>gi|431897017|gb|ELK06281.1| Far upstream element-binding protein 1 [Pteropus alecto]
Length = 632
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 163 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 222
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 223 KPLR---ITGDPYKVQQAKEMVLELI 245
>gi|255645221|gb|ACU23108.1| unknown [Glycine max]
Length = 208
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
A S T ++ + S A A+IG G + I R +GA ++I++ P +E+ G+
Sbjct: 77 APSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGT 136
Query: 218 FEQIKQASAMVRELI 232
Q++ A +++ +
Sbjct: 137 ASQVQTAQQLIQNFM 151
>gi|146218585|gb|AAI39895.1| Zgc:162730 protein [Danio rerio]
Length = 336
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 221 IKQASAM-VRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHF 278
IK +M + + R+ P P A S+ +KT+LC +F + GSC +G +C F
Sbjct: 76 IKADRSMSLNDSFSRMKPHDVPPPPGFPPLATLPSNRYKTELCRSFQEHGSCKYGAKCQF 135
Query: 279 AHGAAELR 286
AHG ELR
Sbjct: 136 AHGENELR 143
>gi|327264009|ref|XP_003216809.1| PREDICTED: far upstream element-binding protein 2-like [Anolis
carolinensis]
Length = 699
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 426 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 484
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
++ T + V + G IIG+GG +I + +G K+ I R++ L GS E ++
Sbjct: 134 STVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPESVQ 193
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 194 KAKMMLDDIVSR 205
>gi|403296273|ref|XP_003939037.1| PREDICTED: far upstream element-binding protein 2, partial [Saimiri
boliviensis boliviensis]
Length = 644
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 370 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 428
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 76 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 135
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 136 KAKMMLDDIVSR 147
>gi|330792528|ref|XP_003284340.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
gi|325085686|gb|EGC39088.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
Length = 442
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC +FA+ G C +G +C FAHG ELR
Sbjct: 192 YKTELCRSFAETGVCRYGLKCQFAHGKDELR 222
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
TA++++ + L G IIG+GG +I +++GA++++ P R I ++G+ +QI A
Sbjct: 318 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSNGQPE-RIITIKGTEQQIHSA 376
Query: 225 SAMVRELI 232
++++ +
Sbjct: 377 QYLLQQCV 384
>gi|268558150|ref|XP_002637065.1| Hypothetical protein CBG09562 [Caenorhabditis briggsae]
Length = 590
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNL--RNIELEGS 217
S GASA ++ V S G IIGK G K++ +TG K+ + E DPN R + G+
Sbjct: 223 SGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDE-DPNAPERCAIIMGT 281
Query: 218 FEQIKQASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNF 257
+QI +A+ + EL+ + A + + GSA S+ F
Sbjct: 282 RDQIYRATERITELVRK--SAQQQGGSMTGSAGAESSTFF 319
>gi|413933967|gb|AFW68518.1| hypothetical protein ZEAMMB73_983755, partial [Zea mays]
Length = 131
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P+AS G S+T ++ + S +I+G GGVN +I + +GA+L + + A + +E++G
Sbjct: 36 PSAS-GFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQG 94
Query: 217 SFEQIKQASAMVRELI 232
+ +Q K A +++ I
Sbjct: 95 TLDQAKAAQSLLEGFI 110
>gi|390478449|ref|XP_003735512.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Callithrix jacchus]
Length = 657
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 383 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 441
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 89 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 148
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 149 KAKMMLDDIVSR 160
>gi|355755365|gb|EHH59112.1| hypothetical protein EGM_09154, partial [Macaca fascicularis]
Length = 629
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 354 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 412
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 119
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 120 KAKMMLDDIVSR 131
>gi|344306102|ref|XP_003421728.1| PREDICTED: far upstream element-binding protein 2-like [Loxodonta
africana]
Length = 766
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 407 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 465
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 113 TSLTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 172
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 173 KAKMMLDDIVSR 184
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 150 EPPPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNL 209
E P A P+ + T I++ A AG IIGKGG + I QTG L + + N
Sbjct: 375 ERPDAGPPSRRADSRPTDTIAIPAERAGFIIGKGGETIRSIQDQTGVHLELDRNSEAGNE 434
Query: 210 RNIELEGSFEQIKQASAMVRELIVR 234
+ + G+ +QI+ ++R+++ R
Sbjct: 435 KIFIIRGNPDQIEHCKMVIRDMLAR 459
>gi|147905884|ref|NP_001082897.1| far upstream element-binding protein 2 [Danio rerio]
gi|141795754|gb|AAI39702.1| MGC163038 protein [Danio rerio]
Length = 666
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
S+ A G +IG+GG N K I +QTGA + I DPN + + GS +QI A
Sbjct: 408 SIPAHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQ 467
Query: 227 MVRELI 232
++ + I
Sbjct: 468 LIEDKI 473
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHEADPNL-RNIELEGSFE 219
G+ ++ + A AG IIGKGG KQ+ + G K+ I+D PN+ + + + G
Sbjct: 190 GSGHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMDKPLRIIGDPY 249
Query: 220 QIKQASAMVRELI 232
+++QA MV+E++
Sbjct: 250 KVQQAREMVQEIL 262
>gi|145516462|ref|XP_001444125.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411525|emb|CAK76728.1| unnamed protein product [Paramecium tetraurelia]
Length = 193
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT +C ++ G+C+ G +C FAHG ELR
Sbjct: 17 YKTSICRHYEYGNCSIGSKCQFAHGIDELR 46
>gi|119626763|gb|EAX06358.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Homo
sapiens]
Length = 656
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 177 GAIIGKG-GVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKG G K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 389 GLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 448
>gi|397523648|ref|XP_003831836.1| PREDICTED: far upstream element-binding protein 2-like [Pan
paniscus]
Length = 630
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 356 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 414
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 62 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 121
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 122 KAKMMLDDIVSR 133
>gi|367015960|ref|XP_003682479.1| hypothetical protein TDEL_0F04570 [Torulaspora delbrueckii]
gi|359750141|emb|CCE93268.1| hypothetical protein TDEL_0F04570 [Torulaspora delbrueckii]
Length = 245
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG C +G++C FAHG EL+
Sbjct: 153 YKTELCESFTTKGHCKYGNKCQFAHGLQELK 183
>gi|355703041|gb|EHH29532.1| hypothetical protein EGK_09989, partial [Macaca mulatta]
Length = 625
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 354 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 412
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 119
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 120 KAKMMLDDIVSR 131
>gi|145510063|ref|XP_001440966.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408202|emb|CAK73569.1| unnamed protein product [Paramecium tetraurelia]
Length = 51
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT +C +F G+C+ G++C FAHG ELR
Sbjct: 17 YKTSICRHFELGNCSIGEKCQFAHGQKELR 46
>gi|17508791|ref|NP_492239.1| Protein GLA-3, isoform b [Caenorhabditis elegans]
gi|3879305|emb|CAB04666.1| Protein GLA-3, isoform b [Caenorhabditis elegans]
Length = 679
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
KTK+C ++ + GSC++GD C +AHG +LRK
Sbjct: 71 KTKICDHWRRSGSCSYGDACWYAHGEDDLRKVV 103
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 90 NGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAI 130
+ P + K+++C+ + C +GD C +AHGE +L K + I
Sbjct: 65 HNPALRKTKICDHWRRSGSCSYGDACWYAHGEDDLRKVVRI 105
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + G+ +QI A ++ E I
Sbjct: 388 GLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQLIEEKI 446
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
+S T + V + G IIG+GG +I +++G K+ I R + L GS + ++
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQ 151
Query: 223 QASAMVRELIVR 234
+A ++ +++ R
Sbjct: 152 KAKMLLDDIVAR 163
>gi|359067148|ref|XP_003586314.1| PREDICTED: far upstream element-binding protein 2-like, partial
[Bos taurus]
Length = 679
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 384 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 442
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 90 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 149
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 150 KAKMMLDDIVSR 161
>gi|195398865|ref|XP_002058041.1| GJ15863 [Drosophila virilis]
gi|194150465|gb|EDW66149.1| GJ15863 [Drosophila virilis]
Length = 433
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC + + G C +G++C FAHG ELR
Sbjct: 117 TSRYKTELCRPYEEAGECKYGEKCQFAHGYHELR 150
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 109 LPPQQPMNTSRYKTELCRPYEEAGECKYGEKCQFAHGYHEL 149
>gi|118358088|ref|XP_001012292.1| hypothetical protein TTHERM_00105420 [Tetrahymena thermophila]
gi|89294059|gb|EAR92047.1| hypothetical protein TTHERM_00105420 [Tetrahymena thermophila
SB210]
Length = 737
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
+KT C +F G+CT G++C+FAH ELR
Sbjct: 285 YKTHKCRHFLSGNCTMGEKCNFAHSDKELR 314
>gi|380800867|gb|AFE72309.1| far upstream element-binding protein 2, partial [Macaca mulatta]
Length = 660
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 386 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 444
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 92 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 151
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 152 KAKMMLDDIVSR 163
>gi|355668419|gb|AER94185.1| ankyrin repeat domain 17 [Mustela putorius furo]
Length = 1310
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K+SV +++ +IG+GG N I TGA + I + R I + G E +QA+ +
Sbjct: 446 KVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 505
Query: 228 VRELI 232
+ LI
Sbjct: 506 INALI 510
>gi|193788418|dbj|BAG53312.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K+SV +++ +IG+GG N I TGA + I + R I + G E +QA+ +
Sbjct: 113 KVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 172
Query: 228 VRELI 232
+ LI
Sbjct: 173 INALI 177
>gi|302840690|ref|XP_002951897.1| hypothetical protein VOLCADRAFT_105302 [Volvox carteri f.
nagariensis]
gi|300262798|gb|EFJ47002.1| hypothetical protein VOLCADRAFT_105302 [Volvox carteri f.
nagariensis]
Length = 894
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 258 KTKLCGNFAKGSCTFGDRCHFAHGAAELRKT 288
+ +LC N+A G CT+GDRC F+H E K+
Sbjct: 101 QAELCTNYALGRCTWGDRCKFSHDLVEYIKS 131
>gi|255718555|ref|XP_002555558.1| KLTH0G12100p [Lachancea thermotolerans]
gi|238936942|emb|CAR25121.1| KLTH0G12100p [Lachancea thermotolerans CBS 6340]
Length = 279
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F+ KGSC +G C FAHG EL+
Sbjct: 177 YKTELCESFSTKGSCKYGHNCQFAHGLQELK 207
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 324 GGIQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFTIRGLP 383
Query: 219 EQIKQASAMVRELI 232
QI+ A ++ E +
Sbjct: 384 PQIEVARHLIDEKV 397
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHE----ADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 132 GNSTVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 188
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 189 DPFKVQQAREMVLEII 204
>gi|325192190|emb|CCA26643.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 332
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
S+ +KT+LC F++ G C +G +C FAHG +ELR+
Sbjct: 75 SALYKTELCKRFSEFGVCRYGVKCQFAHGHSELRQ 109
>gi|2055427|gb|AAB53222.1| KSRP [Homo sapiens]
Length = 711
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 203 KAKMMLDDIVSR 214
>gi|354472162|ref|XP_003498309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Cricetulus
griseus]
gi|344235754|gb|EGV91857.1| Butyrate response factor 1 [Cricetulus griseus]
Length = 338
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
SS +K +LC F + G+C +GD+C FAHG ELR
Sbjct: 112 SSRYKMELCRPFEENGACKYGDKCQFAHGIHELR 145
>gi|154355000|ref|NP_003676.2| far upstream element-binding protein 2 [Homo sapiens]
gi|332852032|ref|XP_512315.3| PREDICTED: far upstream element-binding protein 2 [Pan troglodytes]
gi|402903923|ref|XP_003914804.1| PREDICTED: far upstream element-binding protein 2 [Papio anubis]
gi|313104306|sp|Q92945.4|FUBP2_HUMAN RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=p75
gi|119589503|gb|EAW69097.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_c [Homo sapiens]
Length = 711
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 203 KAKMMLDDIVSR 214
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSF 218
G +V A G +IGKGG N K I +Q+GA + ++ + DPNLR + G
Sbjct: 352 GGIQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFTIRGLP 411
Query: 219 EQIKQASAMVRELI 232
QI+ A ++ E +
Sbjct: 412 PQIEVARHLIDEKV 425
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRDHE----ADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|344237478|gb|EGV93581.1| Far upstream element-binding protein 1 [Cricetulus griseus]
Length = 449
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 148 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 207
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 208 KPLR---ITGDPYKVQQAKEMVLELI 230
>gi|37360050|dbj|BAC98003.1| mKIAA0697 protein [Mus musculus]
Length = 1119
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAM 227
K+SV +++ +IG+GG N I TGA + I + R I + G E +QA+ +
Sbjct: 241 KVSVPSTVISRVIGRGGCNINAIRECTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 300
Query: 228 VRELI 232
+ LI
Sbjct: 301 INALI 305
>gi|114677174|ref|XP_001136016.1| PREDICTED: tristetraprolin [Pan troglodytes]
Length = 503
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 256 NFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
+KT+LC F++ G C +G +C FAHG ELR+
Sbjct: 280 RYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 312
>gi|402592033|gb|EJW85962.1| KH domain-containing protein, partial [Wuchereria bancrofti]
Length = 605
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN---IELEGSFEQIKQA 224
+I+V + L G IIGKGG N +++ R TGA++ I D D + + + G+F+ +
Sbjct: 504 EIAVPSRLVGRIIGKGGQNVRELQRLTGAQVKIPDDAGDDETQKATIVRVLGNFQSSQAV 563
Query: 225 SAMVRELI------VRIGPAHAKNPA 244
+ +LI + IGPA+ ++ +
Sbjct: 564 QVKLGQLITDFSQRLNIGPANGQSTS 589
>gi|326513912|dbj|BAJ92106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
FKTKLC + +GSC G C FAHG ELR
Sbjct: 15 FKTKLCALWRRGSCPRGPSCGFAHGEGELR 44
>gi|401839308|gb|EJT42589.1| TIS11-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 289
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
+KT+LC +F KG+C +G +C FAHG EL+
Sbjct: 170 YKTELCESFTLKGTCPYGSKCQFAHGLNELK 200
>gi|154345293|ref|XP_001568588.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065925|emb|CAM43707.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1012
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAH 119
V SR+C +AEGC++GD+CH+ H
Sbjct: 986 VPSRVCKFFGTAEGCQYGDRCHYVH 1010
>gi|389583886|dbj|GAB66620.1| hypothetical protein PCYB_094050 [Plasmodium cynomolgi strain B]
Length = 2252
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
FKTKLC F K G+C G++C AHG AELR+
Sbjct: 595 FKTKLCKYFDKEGTCPSGEKCRHAHGQAELRQ 626
>gi|54648253|gb|AAH85004.1| KHSRP protein [Homo sapiens]
Length = 710
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 203 KAKMMLDDIVSR 214
>gi|410917265|ref|XP_003972107.1| PREDICTED: far upstream element-binding protein 2-like [Takifugu
rubripes]
Length = 635
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
SV A G +IG+GG N K I +QTGA + + DPN + + G+ +QI A
Sbjct: 383 SVPAHKCGLVIGRGGENVKSINQQTGAFVKMTHQPPPNGDPNFKLFTIRGTPQQIDHAKQ 442
Query: 227 MVRELI 232
++ E I
Sbjct: 443 LIEEKI 448
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 160 SFGASA-TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSF 218
S G SA T + SV ++ G IIG+GG +I +++G K+ A R + L G
Sbjct: 95 SVGPSALTEECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLPERRVSLTGPP 154
Query: 219 EQIKQASAMVRELIVR 234
+ I++A A++ +++ R
Sbjct: 155 DAIQRAKALIDDIVSR 170
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHEADPNL-RNIELEGSFEQIKQAS 225
++ + A AG IIG+GG KQ+ + G K+ I+D PN+ + + + G +++QA
Sbjct: 184 EMIIPAGKAGLIIGRGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQQAK 243
Query: 226 AMVRELI 232
MV E++
Sbjct: 244 EMVNEIL 250
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
A S T ++ + S A A+IG G + I R +GA ++I++ P +E+ G+
Sbjct: 220 APSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGT 279
Query: 218 FEQIKQASAMVREL 231
Q++ A +++ +
Sbjct: 280 ASQVQTAQQLIQAI 293
>gi|119626762|gb|EAX06357.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 654
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 172 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 232 KPLR---ITGDPYKVQQAKEMVLELI 254
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 177 GAIIGKG-GVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G IIGKG G K I +Q+GA++ ++ + ADPN++ + G+ +QI A ++ E I
Sbjct: 388 GLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
>gi|268534368|ref|XP_002632315.1| Hypothetical protein CBG07226 [Caenorhabditis briggsae]
Length = 287
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 254 SSNFKTKLCGNFA--KGSCTFGDRCHFAHGAAELRKT 288
SNFKT+LC + + +C G+RC FAHG ELR +
Sbjct: 69 QSNFKTRLCQLYMGRRTTCPHGERCRFAHGVEELRSS 105
>gi|213623886|gb|AAI70356.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 237 PAHAKNPATAGSAAHP----LSS-NFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
PA + P +A P LSS FKT+LC +A+ G C + +RC FAHG +ELR
Sbjct: 21 PADPETPLLPSFSAPPKHSSLSSLRFKTELCSRYAESGFCAYRNRCQFAHGLSELR 76
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F C +G C F+H Q P +P N+++PP GP
Sbjct: 85 KTELCRSFHVLGTCNYGLRCLFIH--------SPQERREPPVLPD---NLSLPPRRYGGP 133
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
+ R+ ++ GC +G +CHF H
Sbjct: 134 YRERCRL---WSAPGGCPYGARCHFQH 157
>gi|156837017|ref|XP_001642545.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113087|gb|EDO14687.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 304
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
FKT+LC F KG C +G++C FAHG E++
Sbjct: 179 FKTELCKTFTTKGYCKYGNKCQFAHGLHEVK 209
>gi|432889388|ref|XP_004075252.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like [Oryzias
latipes]
Length = 390
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 253 LSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S+ +KT+LC + + GSC +G +C FAHG ELR
Sbjct: 142 ISTRYKTELCRTYEESGSCKYGAKCQFAHGLEELR 176
>gi|312383024|gb|EFR28263.1| hypothetical protein AND_04029 [Anopheles darlingi]
Length = 572
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
+S +KT+LC + + G C +GD+C FAHG ELR
Sbjct: 273 TSRYKTELCRPYEEAGECKYGDKCQFAHGMHELRN 307
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 80 RNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
R + P P + K+ +C A CK+GDKC FAHG EL
Sbjct: 261 RTQSEPLPQQVNTSRYKTELCRPYEEAGECKYGDKCQFAHGMHEL 305
>gi|198470731|ref|XP_001355382.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
gi|198145593|gb|EAL32440.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S +KT+LC F + G C +G++C FAHG ELR
Sbjct: 141 SRYKTELCRPFEEAGECKYGEKCQFAHGFHELR 173
>gi|403330994|gb|EJY64415.1| hypothetical protein OXYTRI_15554 [Oxytricha trifallax]
Length = 313
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 255 SNFKTKLCGNFAKG-SCTFGDRCHFAHGAAELRK 287
+NFKT C F +G +C +G+RC FAHG+ +LR+
Sbjct: 81 ANFKTVKCKFFDQGKNCPYGNRCSFAHGSQDLRQ 114
>gi|402593585|gb|EJW87512.1| hypothetical protein WUBG_01579 [Wuchereria bancrofti]
Length = 379
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 66 AQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
AQM N P P+ A P+ + K+ +C+ ++ C+FG++C FAHG EL
Sbjct: 86 AQMQNAPSTYPSEIHLRASKTPSPRNRELYKTALCDFWSAGIPCRFGERCWFAHGPHEL 144
>gi|296223994|ref|XP_002757880.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Callithrix jacchus]
Length = 857
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 513 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 546
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 26/108 (24%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F + C +GE C F H G++ + + P+
Sbjct: 517 KTELCRPFEESGTCKYGEKCQFAH----GFHELRSLTRHPK------------------- 553
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK-PIAISHDDPRAFG 139
K+ +C ++ C +G +CHF H E P + D RAFG
Sbjct: 554 --YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFG 599
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 174 SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 232
S A IIG GG N I R +GA L++++ P+ +E++G+ Q++ A +++E I
Sbjct: 249 SYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFI 307
>gi|301116960|ref|XP_002906208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107557|gb|EEY65609.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 250
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC +F + GSC +G +C FAHG ELR
Sbjct: 43 YKTELCKHFTENGSCRYGSKCQFAHGEEELR 73
>gi|242041209|ref|XP_002467999.1| hypothetical protein SORBIDRAFT_01g037830 [Sorghum bicolor]
gi|241921853|gb|EER94997.1| hypothetical protein SORBIDRAFT_01g037830 [Sorghum bicolor]
Length = 442
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
KT+LC + +G+C + RC FAHG ELR
Sbjct: 372 MKTELCNKWERGACPYDGRCRFAHGMEELR 401
>gi|413955479|gb|AFW88128.1| hypothetical protein ZEAMMB73_458885 [Zea mays]
Length = 655
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 180 IGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEGSFEQIKQASAMVRELI 232
I G + I Q+GAK+ + RDHEA+P R +EL G EQI +A +++E++
Sbjct: 475 IQMEGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKAEQLIKEVL 530
>gi|326928249|ref|XP_003210293.1| PREDICTED: ankyrin repeat and KH domain-containing protein 1-like
[Meleagris gallopavo]
Length = 2578
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN-LRNIELEGSFEQIKQASA 226
K+SV AS+ I+G+GG N I TGA + + D + D N R I + G E + A
Sbjct: 1670 KLSVPASVVSRIMGRGGCNITAIQDVTGAHIDV-DKQKDKNGERMITIRGGMESTRYAVQ 1728
Query: 227 MV--------RELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTF 272
++ +EL I H + PA++ + H +NF + + A +F
Sbjct: 1729 LINALIQDPAKELEDLIPKTHIRTPASSNKSIH---ANFSSGVSTASASNKNSF 1779
>gi|34881683|ref|XP_228661.2| PREDICTED: uncharacterized protein LOC317308 [Rattus norvegicus]
gi|109512098|ref|XP_001053657.1| PREDICTED: uncharacterized protein LOC317308 [Rattus norvegicus]
Length = 722
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 119 SERYKTELCRPFEENGTCRYGNKCQFAHGYHELR 152
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAV 75
K++PC F S CP+G CHF+H N Q+ LP +V
Sbjct: 161 KTEPCRTFHSIGYCPYGSRCHFIH------NQPEQLPMLPGSV 197
>gi|195174909|ref|XP_002028208.1| GL13141 [Drosophila persimilis]
gi|194116707|gb|EDW38750.1| GL13141 [Drosophila persimilis]
Length = 446
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 255 SNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S +KT+LC F + G C +G++C FAHG ELR
Sbjct: 128 SRYKTELCRPFEEAGECKYGEKCQFAHGFHELR 160
>gi|32566847|ref|NP_505926.2| Protein CCCH-1, isoform a [Caenorhabditis elegans]
gi|24817303|emb|CAA98475.2| Protein CCCH-1, isoform a [Caenorhabditis elegans]
Length = 460
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 72 PQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
PQ P + N PPP P + K+ +C C +G++C +AHGE E
Sbjct: 178 PQLTPMATPNGQAPPP--KNPKLYKTELCRSWMDHGRCNYGERCQYAHGELE 227
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + G+ +QI A ++ E I
Sbjct: 390 GLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFIIRGNPQQIDHAKQLIEEKI 448
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 156 GPAASFGASATAK------ISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDHEADPN 208
GP + F S+ + I + A AG IIGKGG KQ+ + G K+ I+D + N
Sbjct: 167 GPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTN 226
Query: 209 L-RNIELEGSFEQIKQASAMVRELI 232
+ + + + G +++QA MV +L+
Sbjct: 227 MDKPLRIVGEPFKVQQACEMVMDLL 251
>gi|392347947|ref|XP_003749978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDWIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
AA T + V S A IIG GG N I R +GA L+I++ P+ +E++G+
Sbjct: 298 AAPIVTQMTQTMQVPLSYAEDIIGVGGSNIAYIRRTSGAILTIQESRT-PDEITVEIKGT 356
Query: 218 FEQIKQASAMVRELI 232
Q++ A +++E I
Sbjct: 357 ASQVQMAQQLIQEFI 371
>gi|47221719|emb|CAG10191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + GSC +G++C FAHG ELR
Sbjct: 33 STRYKTELCRPFEENGSCKYGEKCQFAHGYHELR 66
>gi|410900360|ref|XP_003963664.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Takifugu rubripes]
Length = 419
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
S+ +KT+LC F + GSC +G++C FAHG ELR
Sbjct: 127 STRYKTELCRPFEESGSCKYGEKCQFAHGFHELR 160
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR-DHEADPNLRNIELEGSFEQIKQ 223
T ++ + AS G++IGKGG K+I TGA++ + D + R + + GS + I Q
Sbjct: 212 VTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGSQDAIIQ 271
Query: 224 ASAMVRELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHF--AHG 281
++ +I+ P A P P + L GN + FG F A G
Sbjct: 272 CVKLICTVILESPPKGATIP------YRPSPTPGTVLLAGNQVFEASDFGSHPLFSVAQG 325
Query: 282 AAELRKT 288
+L++T
Sbjct: 326 GVDLQQT 332
>gi|428180643|gb|EKX49510.1| vigilin [Guillardia theta CCMP2712]
Length = 1504
Score = 40.8 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 169 ISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMV 228
I VD L G IIGK G +Q+ TGAK+ I E P R + + G+ EQ K A +
Sbjct: 441 IDVDEDLVGVIIGKKGATIRQLQEDTGAKIKI---ETTPMCRAL-IRGTREQCKLAIEQI 496
Query: 229 RELIVRI 235
E+ + +
Sbjct: 497 EEMTLNL 503
>gi|159475617|ref|XP_001695915.1| hypothetical protein CHLREDRAFT_191517 [Chlamydomonas reinhardtii]
gi|158275475|gb|EDP01252.1| predicted protein [Chlamydomonas reinhardtii]
Length = 338
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNL--RNIELEGSFEQI 221
AK+ V S+AG++IGK G N +Q+ R +GA++ + R E P R + L GS +
Sbjct: 43 VVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAV 102
Query: 222 KQASAMVRELIVRIGPAHA-----------KNPATAGSAAHPLSSNFKTKLCG 263
A ++ E I R A A K P AG A L+ +LCG
Sbjct: 103 LTAIFLILEKISRDVSAGAGANGAKRGVPVKKPEDAGQAQVKLA--LSRRLCG 153
>gi|341903722|gb|EGT59657.1| hypothetical protein CAEBREN_31186 [Caenorhabditis brenneri]
Length = 468
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 56 HYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKC 115
H GG + + + P + P N AVPPP + P + K+ +C C +G++C
Sbjct: 172 HNLIGGTSPFSTPQHTPISTPV---NGAVPPPKN--PKLYKTELCRSWMDHGRCNYGERC 226
Query: 116 HFAHGEWE 123
+AHGE E
Sbjct: 227 QYAHGEVE 234
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIEL 214
AA+ + I V S G +IGK G + + +GAK+ I +D +AD N R +EL
Sbjct: 140 AAAVAQEISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVEL 199
Query: 215 EGSFEQIKQASAMVRELIVR 234
G+ + +A +++ +I
Sbjct: 200 VGTLGSVDKAELLIKSVIAE 219
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 144 RMGGRY---EPPPAPGPAASFGASATA----KISVDASLAGAIIGKGGVNSKQICRQTGA 196
R GGR + PGP+ FGA T +I V GAIIGK G+ K + +QT +
Sbjct: 169 RRGGRLSRNQGASQPGPSGEFGAPRTTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQS 228
Query: 197 KLSIRDHE 204
K+ I E
Sbjct: 229 KVDIHRKE 236
>gi|297838575|ref|XP_002887169.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333010|gb|EFH63428.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 32 SKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG 91
+K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 225 TKTELCNKWQETGTCPYGDHCQFAH----GIKELRPVIRHPR------------------ 262
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+ +C + + + C +G +CHF H E K +A
Sbjct: 263 ---YKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVA 297
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD C FAHG ELR
Sbjct: 226 KTELCNKWQETGTCPYGDHCQFAHGIKELR 255
>gi|397605950|gb|EJK59163.1| hypothetical protein THAOC_20649 [Thalassiosira oceanica]
Length = 1096
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FK +LC NF K G C FG C +AHG ELR
Sbjct: 596 FKVELCRNFGKPGGCPFGSSCTYAHGTQELR 626
>gi|294891283|ref|XP_002773509.1| hypothetical protein Pmar_PMAR007821 [Perkinsus marinus ATCC 50983]
gi|239878667|gb|EER05325.1| hypothetical protein Pmar_PMAR007821 [Perkinsus marinus ATCC 50983]
Length = 307
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 239 HAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTFGDRCHFAH 280
H + PA GS + + + C NFA+G+CT+GDRC +AH
Sbjct: 227 HMRAPAANGSRGR---DSQRPEPCRNFARGTCTWGDRCRYAH 265
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
+V A G +IGKGG N K I +Q+GA + ++ + DP+LR + G +QI+ A
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRVFTIRGVPQQIEVARH 419
Query: 227 MVRELIVRIGPAHAKNPATAGSA------AHPLSSNFKTKLCGNF 265
++ E ++G A P G + A P + F + G F
Sbjct: 420 LIDE---KVGGASLGAPGAFGQSPFSQPPAAPHQTTFPPRSSGCF 461
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKL-SIRD----HEADPNLRNIELEG 216
G S +I + AS G +IGKGG KQ+ +TG K+ I+D AD LR + G
Sbjct: 160 GNSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR---ITG 216
Query: 217 SFEQIKQASAMVRELI 232
+++QA MV E+I
Sbjct: 217 DPFKVQQAREMVLEII 232
>gi|26325406|dbj|BAC26457.1| unnamed protein product [Mus musculus]
Length = 306
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 189 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 248
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 249 KPLR---ITGDPYKVQQAKEMVLELI 271
>gi|392891963|ref|NP_001254325.1| Protein MEX-1, isoform a [Caenorhabditis elegans]
gi|1899062|gb|AAC47486.1| MEX-1 [Caenorhabditis elegans]
gi|14530587|emb|CAA91362.2| Protein MEX-1, isoform a [Caenorhabditis elegans]
Length = 494
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
FKT LC F + GSC +G+ C FAHG ELR
Sbjct: 139 FKTALCDAFKRSGSCPYGEACRFAHGENELR 169
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 20/87 (22%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K+ C F + CP+GE+C F H G N + +P+ R A P
Sbjct: 140 KTALCDAFKRSGSCPYGEACRFAH----GENEL--------RMPSQPRGKAHP------- 180
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAH 119
K+++C++ ++ C +G +C F H
Sbjct: 181 -KYKTQLCDKFSNFGQCPYGPRCQFIH 206
>gi|409077381|gb|EKM77747.1| hypothetical protein AGABI1DRAFT_107922 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1063
Score = 40.8 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 39 KFFSTAGCPFGESCHFLHYFPGG---YNAVAQMMNLPQAVPAPSRNMAVPPPASNGPTVV 95
+F+ C FG +C F H P G N ++ + P + + V SN V
Sbjct: 15 RFYIRGRCTFGNNCKFSHTTPSGDRLANDTSRAEDKSSNAPNSTSSHGV--TGSNESKVK 72
Query: 96 KSRMCNR---LNSAEGCKFGDKCHFAHGEWELGKPIAISHDDPRAFGAVPGRMG 146
N+ L CK+GDKC F H + E G PI D +P R+G
Sbjct: 73 PLAKVNKPCWLWQGGSCKWGDKCRFRH-DAEAGSPIVTQGGDAT---PIPNRVG 122
>gi|301111856|ref|XP_002905007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095337|gb|EEY53389.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 751
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 249 AAHPLSSNFKTKLCGNFAKGSCTFG-DRCHFAHGAAELR 286
AA P ++KT+LC F KG+C + + C FAHG +LR
Sbjct: 551 AATPRLQSYKTELCYYFLKGNCNYTKEECRFAHGQNDLR 589
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
A S T ++ + S A A+IG G + I R +GA ++I++ P +E+ G+
Sbjct: 419 APSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGT 478
Query: 218 FEQIKQASAMVRELIVRIG-PAHAKNPATAGSAAHPLSSN 256
Q++ A +++ + G P A+ + +P +++
Sbjct: 479 ASQVQTAQQLIQNFMAEAGAPTQAQTGGSTDQGYNPYAAH 518
>gi|148225622|ref|NP_001081884.1| ZFP36 ring finger protein [Xenopus laevis]
gi|4580020|gb|AAD24207.1|AF061980_1 CCCH zinc finger protein C3H-1 [Xenopus laevis]
gi|51950038|gb|AAH82435.1| C3H-1 protein [Xenopus laevis]
gi|80477840|gb|AAI08849.1| C3H-1 protein [Xenopus laevis]
Length = 313
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRK 287
S +KT+LC F++ G+C +G +C FAHG ELR+
Sbjct: 101 SPRYKTELCRTFSETGTCKYGAKCQFAHGKIELRE 135
>gi|255574314|ref|XP_002528071.1| zinc finger protein, putative [Ricinus communis]
gi|223532532|gb|EEF34321.1| zinc finger protein, putative [Ricinus communis]
Length = 313
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC + + G C +GD C FAHG ELR
Sbjct: 238 WKTELCNKWQETGMCPYGDHCQFAHGITELR 268
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 25/88 (28%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 239 KTELCNKWQETGMCPYGDHCQFAH----GITELRPVIRHPR------------------- 275
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHG 120
K+++C + + E C +G +CHF H
Sbjct: 276 --YKTQVCRMVVAGEVCPYGHRCHFRHS 301
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 151 PPPAPGP--AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN 208
PP AP P AA G T +I + + GAIIGKGG +I +G+ + I + + N
Sbjct: 377 PPTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESSN 436
Query: 209 LRNIELEGSFE 219
R + + G+ E
Sbjct: 437 ERLVTITGTAE 447
>gi|32566849|ref|NP_505927.2| Protein CCCH-1, isoform b [Caenorhabditis elegans]
gi|24817304|emb|CAA98476.2| Protein CCCH-1, isoform b [Caenorhabditis elegans]
Length = 419
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 72 PQAVPAPSRNMAVPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 123
PQ P + N PPP P + K+ +C C +G++C +AHGE E
Sbjct: 137 PQLTPMATPNGQAPPP--KNPKLYKTELCRSWMDHGRCNYGERCQYAHGELE 186
>gi|47204423|emb|CAG14799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 477
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 242 NPATAGSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+P A H +S+ +KT+LC + + G+C +G +C FAHG ELR
Sbjct: 134 SPKATTPAPH-ISTRYKTELCRTYEESGTCKYGTKCQFAHGVDELR 178
>gi|323462214|ref|NP_001191026.1| ankyrin repeat and KH domain-containing protein 1 [Gallus gallus]
Length = 2549
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 168 KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPN-LRNIELEGSFEQIKQASA 226
K+SV AS+ I+G+GG N I TGA + + D + D N R I + G E + A
Sbjct: 1687 KLSVPASVVSRIMGRGGCNITAIQDVTGAHIDV-DKQKDKNGERMITIRGGMESTRYAVQ 1745
Query: 227 MV--------RELIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNFAKGSCTF 272
++ +EL I H + PA++ + H +NF + + A +F
Sbjct: 1746 LINALIQDPAKELEDLIPKTHIRTPASSNKSIH---ANFSSGVSTASASNKNSF 1796
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIEL 214
AA+ + I V S G +IGK G + + +GAK+ I +D +AD N R +EL
Sbjct: 147 AAAVAQEISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVEL 206
Query: 215 EGSFEQIKQASAMVRELIVR 234
G+ + +A +++ +I
Sbjct: 207 VGTLGSVDKAELLIKSVIAE 226
>gi|355567865|gb|EHH24206.1| hypothetical protein EGK_07823 [Macaca mulatta]
Length = 464
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 162 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQI 221
G T ++++ LAG+IIGKGG KQI ++GA + I + + I + G+ +QI
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGFKDQIITITGTQDQI 444
Query: 222 KQASAMVR 229
+ A +++
Sbjct: 445 QNAQYLLQ 452
>gi|194763985|ref|XP_001964112.1| GF21384 [Drosophila ananassae]
gi|190619037|gb|EDV34561.1| GF21384 [Drosophila ananassae]
Length = 470
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC F + G C +G++C FAHG ELR
Sbjct: 135 TSRYKTELCRPFEEAGECKYGEKCQFAHGFHELR 168
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
AT ++++ L G IIGKGG +I ++GA++ + D + R I + G+ QIK
Sbjct: 510 ATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISGTTSQIKLG 569
Query: 225 SAMVRELI 232
++++ I
Sbjct: 570 QYLLQQCI 577
>gi|145326690|ref|NP_001077792.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
thaliana]
gi|91806051|gb|ABE65754.1| zinc finger family protein [Arabidopsis thaliana]
gi|332196643|gb|AEE34764.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
thaliana]
Length = 307
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 32 SKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG 91
+K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 222 TKTELCNKWQETGTCPYGDHCQFAH----GIKELRPVIRHPR------------------ 259
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+ +C + + + C +G +CHF H E K +A
Sbjct: 260 ---YKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVA 294
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD C FAHG ELR
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELR 252
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 156 GPAASFGASATA-KISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIEL 214
G + G++ T+ ++++ LAGAIIGKGG ++I +GA ++I + N R I +
Sbjct: 376 GNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITI 435
Query: 215 EGSFEQIKQASAMVRELI 232
G QI+ A ++++ +
Sbjct: 436 TGLPSQIQMAQYLLQQSV 453
>gi|237842843|ref|XP_002370719.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
gi|211968383|gb|EEB03579.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
Length = 595
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFAKG-SCTFGDRCHFAHGAAELRKTA 289
FKT LC F KG SC +RC FAHG ELR A
Sbjct: 106 FKTSLCSFFVKGISCPMENRCRFAHGVHELRLRA 139
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KTKLC + KGSC +G C++AH +E R+
Sbjct: 36 YKTKLCPWYIKGSCHWGASCNYAHTLSEQRE 66
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNL--RNIELEGS 217
GA+ T +I V + G +IGKGG K+I ++GA++ + +PN R ++GS
Sbjct: 340 QLGAT-TLEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNSSDRMATVQGS 398
Query: 218 FEQIKQASAMVRELIVRI 235
EQI++ ++ E+I ++
Sbjct: 399 QEQIQKVEKIINEIISQV 416
>gi|145509076|ref|XP_001440482.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407699|emb|CAK73085.1| unnamed protein product [Paramecium tetraurelia]
Length = 195
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 258 KTKLCGNFA-KGSCTFGDRCHFAHGAAELR 286
KT+LC NF G C FGD C FAHG EL+
Sbjct: 59 KTELCKNFELTGFCKFGDECSFAHGQLELQ 88
>gi|357477967|ref|XP_003609269.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510324|gb|AES91466.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 384
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYN----AVAQMMNLPQAVPAPSR 80
E + K K C + + C FG C+F H P + ++ S+
Sbjct: 137 EEDQKFIHKMKLCRMYSNGEKCFFGSKCNFRHEDPAKSRDHSWKSGECSSISIGTIGSSK 196
Query: 81 NMAVPPPASNGP---TVVKSRMCNRLNSAEGCKFGDKCHFAHGE----WEL 124
+ A N P T K+ MC R C FG+ CHF+HGE W++
Sbjct: 197 SFGDGIRAVNKPARGTYWKNNMCFRWQHQGSCPFGEDCHFSHGEAAFKWQI 247
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KT++C F G+C G C+FAHG ELR+
Sbjct: 84 YKTRICTKFRFGTCRNGKDCNFAHGVEELRQ 114
>gi|242051899|ref|XP_002455095.1| hypothetical protein SORBIDRAFT_03g004260 [Sorghum bicolor]
gi|241927070|gb|EES00215.1| hypothetical protein SORBIDRAFT_03g004260 [Sorghum bicolor]
Length = 267
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 252 PLSSNFKTKLCGNFAKGSCTFGDRCHFAHGAAELR 286
P +KT+LC F G C + D C FAHG ELR
Sbjct: 78 PEKVYYKTRLCEKFEAGKCAYEDGCTFAHGFDELR 112
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQ 223
S +I V + L G IIGKGG +Q+ QTGA + I AD + ++ ++G+F +
Sbjct: 462 SLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPRGMADGDKVSVHIKGTFLASQA 521
Query: 224 ASAMVRELIVRIGPAH 239
A +R +I + AH
Sbjct: 522 AQRRIRSIIRQSSQAH 537
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS 217
AA T + V S A IIG G N I R + A LSI++ P+ +E++G+
Sbjct: 280 AAPIVTQVTQTMQVPLSYAEDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEIKGT 339
Query: 218 FEQIKQASAMVRELI 232
Q++ A +++E I
Sbjct: 340 GAQVQMAQQLIQEFI 354
>gi|361126940|gb|EHK98925.1| putative KH domain-containing protein [Glarea lozoyensis 74030]
Length = 1322
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI---RDHEADPNLRNIELEGSFEQ 220
S +A +SV A G++IG+ G ++ +TGAK+ + RDH+ I ++G+ Q
Sbjct: 906 SYSATVSVQAGQIGSLIGQRGAEMDKVRSETGAKIDVPNARDHKDQSTRVEISIKGTKSQ 965
Query: 221 IKQASAMVRE 230
+ QA ++ E
Sbjct: 966 VDQAKKIIEE 975
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 165 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQA 224
TA++++ + L G IIG+GG +I + +GA++++ P R I ++G+ +QI A
Sbjct: 317 TTAQVTIPSDLGGTIIGRGGERIARIRQDSGAQITLEPSNGQPE-RIITIKGTEQQIHSA 375
Query: 225 SAMVRELI 232
++++ +
Sbjct: 376 QYLLQQCV 383
>gi|340052537|emb|CCC46818.1| putative zinc finger protein 2 [Trypanosoma vivax Y486]
Length = 128
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELRKT 288
KTK+C + K G CT+G+RC FAHG ELR +
Sbjct: 79 KTKMCIYWEKNGECTWGERCAFAHGKDELRSS 110
>gi|148679985|gb|EDL11932.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Mus
musculus]
Length = 426
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 200 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 259
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 260 KPLR---ITGDPYKVQQAKEMVLELI 282
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 113 DKCHFAHGEWELGKP--------IAISHDDPRAFGAVPGRMG------GRYEPPPAPGPA 158
+ + HG + L +P +A+ H + A+PG+ ++ A P
Sbjct: 124 QQAYAVHGNYALAQPDLTKLHHQLALHHQ--QTPYAIPGQTPFSPAALTQFAAQTAAPPP 181
Query: 159 ASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSF 218
G + T +I++ L G +IG+GG ++I + +GA + I + + R++ + GS
Sbjct: 182 QVQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITGSP 241
Query: 219 EQIKQASAMV 228
E + A ++
Sbjct: 242 ESVAVAQCLI 251
>gi|145494458|ref|XP_001433223.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400340|emb|CAK65826.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMN---LPQAVPAPSRN--MAVPPP 87
K++ C F S C G C F H G A + + Q +PA + N V P
Sbjct: 14 KTQLCRHFTSNGVCALGLRCQFAH---GPQELRANSLQPGFVEQVIPANNFNKVQGVNPM 70
Query: 88 ASNGPTVVKSRMCNRLNSAEG-CKFGDKCHFAHGEWELG 125
N K+++C N G CK G C FAHGE EL
Sbjct: 71 IVN----YKTQLCKHFNPQTGQCKNGPTCTFAHGEGELN 105
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 254 SSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAELRKTAI 290
+ +KT+LC +F + G C G RC FAHG ELR ++
Sbjct: 10 NQKYKTQLCRHFTSNGVCALGLRCQFAHGPQELRANSL 47
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 231 LIVRIGPAHAKNPATAGSAAHPLSSNFKTKLCGNF--AKGSCTFGDRCHFAHGAAEL 285
+ ++ PA+ N +P+ N+KT+LC +F G C G C FAHG EL
Sbjct: 51 FVEQVIPANNFNKV---QGVNPMIVNYKTQLCKHFNPQTGQCKNGPTCTFAHGEGEL 104
>gi|74144555|dbj|BAE36112.1| unnamed protein product [Mus musculus]
Length = 568
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
GS + S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 230 GSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 270
>gi|195132534|ref|XP_002010698.1| GI21684 [Drosophila mojavensis]
gi|193907486|gb|EDW06353.1| GI21684 [Drosophila mojavensis]
Length = 411
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC + + G C +G++C FAHG ELR
Sbjct: 153 TSRYKTELCRPYEEAGECKYGEKCQFAHGCHELR 186
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 152 PPAPGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRN 211
PP GP G T +I + + GAIIGKGG +I + +G+ + I + + + N R
Sbjct: 391 PPQGGPVVP-GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERL 449
Query: 212 IELEGSFEQIKQASAMVRELIVRIGPAHAKN 242
+ + G+ E + A M+ + R P H K+
Sbjct: 450 VTITGTAECNQMALYMLYSRLERKAP-HLKD 479
>gi|195059763|ref|XP_001995696.1| GH17894 [Drosophila grimshawi]
gi|193896482|gb|EDV95348.1| GH17894 [Drosophila grimshawi]
Length = 425
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+S +KT+LC + + G C +G++C FAHG ELR
Sbjct: 107 TSRYKTELCRPYEEAGECKYGEKCQFAHGYHELR 140
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 84 VPPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
+PP + K+ +C A CK+G+KC FAHG EL
Sbjct: 99 LPPQQPMNTSRYKTELCRPYEEAGECKYGEKCQFAHGYHEL 139
>gi|15221301|ref|NP_176987.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
thaliana]
gi|75333565|sp|Q9C9F5.1|C3H15_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 15;
Short=AtC3H15
gi|12325330|gb|AAG52611.1|AC016447_20 putative zinc finger protein; 81747-79917 [Arabidopsis thaliana]
gi|67633492|gb|AAY78670.1| zinc finger (CCCH-type) family protein [Arabidopsis thaliana]
gi|109946509|gb|ABG48433.1| At1g68200 [Arabidopsis thaliana]
gi|332196642|gb|AEE34763.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
thaliana]
Length = 308
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 32 SKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNG 91
+K++ C K+ T CP+G+ C F H G + ++ P+
Sbjct: 223 TKTELCNKWQETGTCPYGDHCQFAH----GIKELRPVIRHPR------------------ 260
Query: 92 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIA 129
K+ +C + + + C +G +CHF H E K +A
Sbjct: 261 ---YKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVA 295
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 258 KTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
KT+LC + + G+C +GD C FAHG ELR
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253
>gi|221485691|gb|EEE23972.1| zinc finger (CCCH type) protein [Toxoplasma gondii GT1]
gi|221502937|gb|EEE28647.1| zinc finger (CCCH type) protein [Toxoplasma gondii VEG]
Length = 595
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 257 FKTKLCGNFAKG-SCTFGDRCHFAHGAAELRKTA 289
FKT LC F KG SC +RC FAHG ELR A
Sbjct: 106 FKTSLCSFFVKGISCPMENRCRFAHGVHELRLRA 139
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 257 FKTKLCGNFAKGSCTFGDRCHFAHGAAELRK 287
+KTKLC + KGSC +G C++AH +E R+
Sbjct: 36 YKTKLCPWYIKGSCHWGASCNYAHTLSEQRE 66
>gi|118382894|ref|XP_001024603.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila]
gi|89306370|gb|EAS04358.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila
SB210]
Length = 383
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAEL 285
+S FKT++C N+ + G C +G +C FAHG EL
Sbjct: 217 TSKFKTEMCKNWMEFGKCNYGKKCQFAHGKNEL 249
>gi|351713497|gb|EHB16416.1| Far upstream element-binding protein 2, partial [Heterocephalus
glaber]
Length = 522
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 356 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 414
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 163 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIK 222
S T + V + G IIG+GG +I + +G K+ I R++ L G+ E ++
Sbjct: 61 TSVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 120
Query: 223 QASAMVRELIVR 234
+A M+ +++ R
Sbjct: 121 KAKMMLDDIVSR 132
>gi|167538517|ref|XP_001750922.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770606|gb|EDQ84292.1| predicted protein [Monosiga brevicollis MX1]
Length = 1635
Score = 40.4 bits (93), Expect = 0.82, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 237 PAHAKNPATAGSAAHPLSS-NFKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
P K ++ P + KT+LC F GSC +GD+C FAHG ELR
Sbjct: 97 PLSGKRSMSSSEIRDPTQNPRLKTRLCTQFMTTGSCRYGDKCIFAHGPHELR 148
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 25 ESESGVGSKSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAV 84
E + G +P T S+AG P + GG + P + + +
Sbjct: 55 ERDEQDGDGREPRTAAESSAGVPAAATS-----VAGGSMPEGSVHRTPLSGKRSMSSSEI 109
Query: 85 PPPASNGPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWEL 124
P N +K+R+C + + C++GDKC FAHG EL
Sbjct: 110 RDPTQN--PRLKTRLCTQFMTTGSCRYGDKCIFAHGPHEL 147
>gi|146162775|ref|XP_001010054.2| tristetraproline, zinc finger protein [Tetrahymena thermophila]
gi|146146277|gb|EAR89809.2| tristetraproline, zinc finger protein [Tetrahymena thermophila
SB210]
Length = 294
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNF-AKGSCTFGDRCHFAHGAAELR 286
KT++C N+ A G+C FGD+C FAHG +L+
Sbjct: 125 LKTEMCKNWTATGTCKFGDKCSFAHGKEQLQ 155
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 95 VKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKPIAI 130
+K+ MC + CKFGDKC FAHG+ +L I +
Sbjct: 125 LKTEMCKNWTATGTCKFGDKCSFAHGKEQLQGKIHL 160
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 238 AHAKNPATAGSAAHPLSSNFKTKLCGNF-AKGSCTFGDRCHFAHGAAEL 285
AH K HP N+KTK C F KG C++G+RC + H +L
Sbjct: 148 AHGKEQLQGKIHLHP---NYKTKPCKKFFIKGICSYGNRCQYIHSITQL 193
>gi|449275835|gb|EMC84592.1| Far upstream element-binding protein 1, partial [Columba livia]
Length = 611
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 164 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEADPNLRNIELEGSF 218
+A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD LR + G
Sbjct: 146 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR---ITGDP 202
Query: 219 EQIKQASAMVRELI 232
+++QA MV ELI
Sbjct: 203 YKVQQAKEMVLELI 216
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 176 AGAIIGKGGVNS------KQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASA 226
G IIGKG ++ K I +Q+GA++ ++ + ADPN++ + G+ +QI A
Sbjct: 349 TGLIIGKGNISYIRGETIKSISQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQ 408
Query: 227 MVRELI 232
++ E I
Sbjct: 409 LIEEKI 414
>gi|322790271|gb|EFZ15270.1| hypothetical protein SINV_11556 [Solenopsis invicta]
Length = 744
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 170 SVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPNLRNIELEGSFEQIKQASAMV 228
+V +S G IIGKGG KQI +QTGA + R ++++ N + + G+ EQ++ A +
Sbjct: 432 TVPSSKCGIIIGKGGETIKQINQQTGAHCELDRKNQSNENEKIFIIRGNPEQVEHAKRIF 491
Query: 229 RELIVRIGPAHAKNPATAGSAAH 251
E + +GPA + T G+ +
Sbjct: 492 SEKL-GMGPAGSSYAGTQGAVGY 513
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 156 GPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEAD-PNLRNIEL 214
GPA S G ++ V + G +IGKGG K+I ++GAK+ + D P R L
Sbjct: 306 GPANSDGV----EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLL 361
Query: 215 EGSFEQIKQASAMVRELI 232
G + ++QA ++ELI
Sbjct: 362 SGKHQAVEQARQRIQELI 379
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 160 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-RDHEADPN--LRNIELEG 216
S + + K+ V + G +IGK G + + +GAK+ I RD +ADP R +EL G
Sbjct: 171 SETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIG 230
Query: 217 SFEQIKQASAMVRELI 232
S E I +A +++++I
Sbjct: 231 SLENINKAEKLIKDVI 246
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 158 AASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLS-IRDH--EADPN-LRNIE 213
A + GA+ +I V G IIGKGG K + ++GA++ I H E D + R +
Sbjct: 265 AQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVR 324
Query: 214 LEGSFEQIKQASAMVRELIVRI 235
+ G +QI+ A M++E++ +I
Sbjct: 325 VTGDKKQIEMAREMIKEVMNQI 346
>gi|149050529|gb|EDM02702.1| zinc finger protein 36, C3H type-like 2 [Rattus norvegicus]
Length = 400
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
GS + S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 142 GSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 182
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 33 KSKPCTKFFSTAGCPFGESCHFLHYFPGGYNAVAQMMNLPQAVPAPSRNMAVPPPASNGP 92
K++ C F + C +GE C F H G++ + + P+
Sbjct: 153 KTELCRPFEESGTCKYGEKCQFAH----GFHELRSLTRHPK------------------- 189
Query: 93 TVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELG-KPIAISHDDPRAFGA 140
K+ +C ++ C +G +CHF H E P + D RAFGA
Sbjct: 190 --YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFGA 236
>gi|432107119|gb|ELK32542.1| Zinc finger protein 36, C3H1 type-like 1 [Myotis davidii]
Length = 319
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 257 FKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
+KT+LC F + G+C +GD+C FAHG ELR
Sbjct: 96 YKTELCRPFEENGACKYGDKCQFAHGIHELR 126
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 167 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD-HEADPNLRNIELEGSFEQIKQAS 225
A++ V G +IGKGG K+I +TGA++ + E P R L G+ +Q++QA
Sbjct: 322 AEVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGPGERRCYLSGTPKQVEQAR 381
Query: 226 AMVRELI 232
+ ELI
Sbjct: 382 QRIEELI 388
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P + + T + + S A A+IG G + I R +GA ++I++ P +E+ G
Sbjct: 374 PPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEIIG 433
Query: 217 SFEQIKQASAMVRELI 232
S Q++ A +V+ +
Sbjct: 434 SASQVQTAQQLVQNFM 449
>gi|62088904|dbj|BAD92899.1| KH-type splicing regulatory protein (FUSE binding protein 2)
variant [Homo sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 177 GAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 232
G +IG+GG N K I +QTGA + I DPN + + GS +QI A ++ E I
Sbjct: 255 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 313
>gi|49249965|ref|NP_001001806.1| zinc finger protein 36, C3H1 type-like 2 [Mus musculus]
gi|223460781|gb|AAI39417.1| Zinc finger protein 36, C3H type-like 2 [Mus musculus]
Length = 484
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
GS + S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 146 GSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 186
>gi|74218063|dbj|BAE42014.1| unnamed protein product [Mus musculus]
Length = 484
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 247 GSAAHPLSSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELR 286
GS + S+ +KT+LC F + G+C +G++C FAHG ELR
Sbjct: 146 GSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 186
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 157 PAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 216
P + + T + + S A A+IG G + I R +GA ++I++ P +E+ G
Sbjct: 374 PPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEIIG 433
Query: 217 SFEQIKQASAMVRELI 232
S Q++ A +V+ +
Sbjct: 434 SASQVQTAQQLVQNFM 449
>gi|426201842|gb|EKV51765.1| hypothetical protein AGABI2DRAFT_62064 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 245 TAGSAAHP-LSSN------FKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 289
TAGS+ P S+N +KT+LC ++ KG+C + +C FAHG ELRK +
Sbjct: 413 TAGSSGQPGPSANNRKLGLYKTELCRSWEEKGTCRYAAKCQFAHGEDELRKVS 465
>gi|55727889|emb|CAH90697.1| hypothetical protein [Pongo abelii]
Length = 297
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 153 PAPGPAASFG-ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSI-----RDHEAD 206
PAPG G +A +I + AS AG +IGKGG KQ+ + G K+ + ++ AD
Sbjct: 173 PAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 207 PNLRNIELEGSFEQIKQASAMVRELI 232
LR + G +++QA MV ELI
Sbjct: 233 KPLR---ITGDPYKVQQAKEMVLELI 255
>gi|213514644|ref|NP_001133741.1| Butyrate response factor 2 [Salmo salar]
gi|209155172|gb|ACI33818.1| Butyrate response factor 2 [Salmo salar]
Length = 411
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 254 SSNFKTKLCGNFAK-GSCTFGDRCHFAHGAAELRKTA 289
S+ +KT+LC F + G+C +G++C FAHG ELR +
Sbjct: 127 STRYKTELCRPFEENGACKYGEKCQFAHGYHELRNLS 163
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,889,550,066
Number of Sequences: 23463169
Number of extensions: 211555489
Number of successful extensions: 743485
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 1830
Number of HSP's that attempted gapping in prelim test: 734168
Number of HSP's gapped (non-prelim): 10726
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)