BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022901
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 100/183 (54%), Gaps = 2/183 (1%)
Query: 91 YEYHHDLGMNYTQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKP 150
+ Y H+LG NY I +LIVGS Q PED+D L++ V I LQQD D+EY+G+D+
Sbjct: 3 HXYRHELGXNYNFIRPDLIVGSCLQTPEDVDKLRKIG-VKTIFCLQQDPDLEYFGVDISS 61
Query: 151 IVERCQVLG-IRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAP 209
I + I+H+R DFD LR +LP V L A+ G YVH TAG GRAP
Sbjct: 62 IQAYAKKYSDIQHIRCEIRDFDAFDLRXRLPAVVGTLYKAVKRNGGVTYVHSTAGXGRAP 121
Query: 210 AVAIAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAIRGATYDLAKDDPWKEPFENLPEHAF 269
AVA+ Y FW G KL A+ +L SKR C P AIR AT D+ K L + F
Sbjct: 122 AVALTYXFWVQGYKLXEAHKLLXSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGF 181
Query: 270 GNV 272
V
Sbjct: 182 SRV 184
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 159 GIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFW 218
GI ++ A D +L + +A ++ A+++ G+V VHC G R+P + IAY+
Sbjct: 80 GITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMM 139
Query: 219 FCGMKLDAAYDMLTSKRPCGPN 240
M + +A ++ R GPN
Sbjct: 140 RQKMDVKSALSIVRQNREIGPN 161
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 159 GIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFW 218
GI ++ A D +L + +A ++ A+++ G+V VHC G R+P + IAY+
Sbjct: 81 GITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMM 140
Query: 219 FCGMKLDAAYDMLTSKRPCGPN 240
M + +A ++ R GPN
Sbjct: 141 RQKMDVKSALSIVRQNREIGPN 162
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 159 GIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFW 218
GI ++ A D +L + +A ++ A+++ G+V VH G R+P + IAY+
Sbjct: 81 GITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMM 140
Query: 219 FCGMKLDAAYDMLTSKRPCGPN 240
M + +A ++ R GPN
Sbjct: 141 RQKMDVKSALSIVRQNREIGPN 162
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 166 PAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLD 225
P +D +L P+A+ ++ A+S+ G V VHC AG+ R+ V +AY+ + L+
Sbjct: 55 PISDHWSQNLSRFFPEAIEFIDEALSQNCG-VLVHCLAGVSRSVTVTVAYLMQKLHLSLN 113
Query: 226 AAYDMLTSKRP-CGPN 240
AYD++ K+ PN
Sbjct: 114 DAYDLVKRKKSNISPN 129
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 102 TQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGIR 161
T I L +G++ Q +D+D + Q + Y++N+ + ++ L
Sbjct: 9 TPILPFLFLGNE-QDAQDLDTM-QRLNIGYVINVTTHLPLYHYEKGL-----------FN 55
Query: 162 HMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCG 221
+ R PA D + +LR +A +E A GKG + +HC AG+ R+ + IAY+
Sbjct: 56 YKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKG-LLIHCQAGVSRSATIVIAYLMKHTR 114
Query: 222 MKLDAAYDMLTSKRP-CGPN 240
M + AY + KRP PN
Sbjct: 115 MTMTDAYKFVKGKRPIISPN 134
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 102 TQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGIR 161
T I L +G++ Q +D+D + Q + Y++N+ + ++ L
Sbjct: 5 TPILPFLFLGNE-QDAQDLDTM-QRLNIGYVINVTTHLPLYHYEKGL-----------FN 51
Query: 162 HMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCG 221
+ R PA D + +LR +A +E A GKG + +HC AG+ R+ + IAY+
Sbjct: 52 YKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKG-LLIHCQAGVSRSATIVIAYLMKHTR 110
Query: 222 MKLDAAYDMLTSKRP-CGPN 240
M + AY + KRP PN
Sbjct: 111 MTMTDAYKFVKGKRPIISPN 130
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 153 ERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVA 212
E + LGIR++ A D + A + A+S+ GK+ VHC G+ R+ +
Sbjct: 44 EAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLV 103
Query: 213 IAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAIR 245
+AY+ + + L A + R PN+ +R
Sbjct: 104 LAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLR 136
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 159 GIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFW 218
G+ +R P D + L + L + +E A+ +G G V+C G R+ AV AY+
Sbjct: 55 GVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDG-GSCLVYCKNGRSRSAAVCTAYLMR 113
Query: 219 FCGMKLDAAYDMLTSKRPCG-PN 240
G LD A+ M+ S RP PN
Sbjct: 114 HRGHSLDRAFQMVKSARPVAEPN 136
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 153 ERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVA 212
E + LGIR++ A D + A + A+S+ GK+ VH G+ R+ +
Sbjct: 45 EAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLV 104
Query: 213 IAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAIRGATYDLAKDDPWKEPFENL 264
+AY+ + + L A + R PN+ +R LA D ++ E L
Sbjct: 105 LAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLRQL---LALDRRLRQGLEAL 153
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 166 PAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLD 225
P +D +L P+A+ ++ A+S+ G V VH AG+ R+ V +AY+ + L+
Sbjct: 58 PISDHWSQNLSRFFPEAIEFIDEALSQNCG-VLVHSLAGVSRSVTVTVAYLMQKLHLSLN 116
Query: 226 AAYDMLTSKRP-CGPN 240
AYD++ K+ PN
Sbjct: 117 DAYDLVKRKKSNISPN 132
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 125 QEERVAYILNLQQDKDIE-YWGIDLKPIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAV 183
++E V +L L +D +IE WG D + + G++ + P PD + +
Sbjct: 25 RKEGVKRVLVLPEDWEIEESWG-DKDYYLSILKKNGLQPLHIPI----PDGGVPSDSQFL 79
Query: 184 SLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRP 236
++++W +SE +G + VHC G+GR + +Y+ G+++++A D + RP
Sbjct: 80 TIMKWLLSEKEGNL-VHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRP 131
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 160 IRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWF 219
R+ P D + + +A+ ++W + G G+V VH AG+ R+ + +AY+
Sbjct: 48 FRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSG-GRVLVHSQAGISRSATICLAYLMQS 106
Query: 220 CGMKLDAAYDMLTSKR 235
++LD A+D + +R
Sbjct: 107 RRVRLDEAFDFVKQRR 122
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 179 LPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSK 234
LP S++ A ++ + K+ +HC GL R+ + IAY+ + + L +YD+L S+
Sbjct: 103 LPSLTSIIHAATTK-REKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSR 157
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 125 QEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAVS 184
Q+ + +I+ ++Q+ + + +KP ++ R++ AD +++ P
Sbjct: 30 QKHGITHIICIRQNIEANF----IKPNFQQL----FRYLVLDIADNPVENIIRFFPMTKE 81
Query: 185 LLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRPC-GPN 240
++ ++ G GKV VH AG+ R+ A IAY+ GMK A+ + +R C PN
Sbjct: 82 FIDGSLQMG-GKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPN 137
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 160 IRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGK---VYVHCTAGLGRAPAVAIAYM 216
++ + P +D +L P+A+S I E +GK V VH AG+ R+ V +AY+
Sbjct: 50 FKYKQIPISDHWSQNLSQFFPEAISF----IDEARGKNCGVLVHSLAGISRSVTVTVAYL 105
Query: 217 FWFCGMKLDAAYDMLTSKR 235
+ ++ AYD++ K+
Sbjct: 106 MQKLNLSMNDAYDIVKMKK 124
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 160 IRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWF 219
I++M+ P AD P+S ++ ++ +G+ +HC AG+ R+ A+ +AY+ +
Sbjct: 64 IQYMQVPVAD-SPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122
Query: 220 CGMKLDAAYDMLTSKRP 236
M L A+ S RP
Sbjct: 123 HAMSLLDAHTWTKSCRP 139
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 166 PAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLD 225
P D + S +A+ ++ + E GKV VH AG+ R+P + +AY+ +L
Sbjct: 56 PVEDSHTADISSHFQEAIDFID-CVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLK 114
Query: 226 AAYDMLTSKR 235
A+D + +R
Sbjct: 115 EAFDYIKQRR 124
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 125 QEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAVS 184
Q+ ++LN + W +D P R + I++ A D L A +
Sbjct: 76 QKAGFTHVLNAAHGR----WNVDTGPDYYRD--MDIQYHGVEADDLPTFDLSVFFYPAAA 129
Query: 185 LLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAI 244
++ A+S+ K+ VHC G R+ + +AY+ M L A + R PN+ +
Sbjct: 130 FIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNRCVLPNRGFL 189
Query: 245 R 245
+
Sbjct: 190 K 190
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRP 236
++S G VHC AG+ R+ + IAY+ F + L AY+ + ++RP
Sbjct: 98 SVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRP 145
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 108 LIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGIRHMRRPA 167
L++GSQ D+D LK+ +V +ILN+ +G VE + +
Sbjct: 11 LLLGSQ-DAAHDLDTLKKN-KVTHILNVA-------YG------VENAFLSDFTYKSISI 55
Query: 168 ADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAA 227
D ++ S P+ +E A G V VH AG+ RA A+ I ++ +A
Sbjct: 56 LDLPETNILSYFPECFEFIEEA-KRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSA 114
Query: 228 YDMLTSKRP 236
+ ++ + RP
Sbjct: 115 FSLVKNARP 123
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 125 QEERVAYILNLQQDKDIE-YWGIDLKPIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAV 183
++E V +L L +D +IE WG D + + G++ + P PD + +
Sbjct: 25 RKEGVKRVLVLPEDWEIEESWG-DKDYYLSILKKNGLQPLHIPI----PDGGVPSDSQFL 79
Query: 184 SLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRP 236
++++W +SE +G + VH G+GR + +Y+ G+++++A D + RP
Sbjct: 80 TIMKWLLSEKEGNL-VHSVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRP 131
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 39/156 (25%)
Query: 102 TQITDNLIVGSQ--PQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLG 159
TQI +++ +GS+ ED+ Q V YILN+ ++ D + G+
Sbjct: 5 TQIFEHVFLGSEWNASNLEDL----QNRGVRYILNVTREIDNFFPGV------------- 47
Query: 160 IRHMRRPAADFDPDSLRSQLPKAVSLLEW------AISEGK---GKVYVHCTAGLGRAPA 210
F+ ++R +A LL + IS+ K K VH G+ R+ +
Sbjct: 48 ----------FEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAS 97
Query: 211 VAIAYMFWFCGMKLDAAYDMLTSKRPCG-PNKTAIR 245
IAY G LD AYD + +R PN + +R
Sbjct: 98 TVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMR 133
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAIR 245
A+S +G+V VHC G+ R+ + +A++ + M L A + + R PN +R
Sbjct: 126 ALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLR 182
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 179 LPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSK 234
LP S++ A ++ + K+ +H GL R+ + IAY+ + + L +YD+L S+
Sbjct: 103 LPSLTSIIHAATTK-REKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSR 157
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 183 VSLLEWAISEGKGK-VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+SL++ E G V VHC AGLGRAP V +A GMK + A + KR
Sbjct: 88 LSLVKAKFCEAPGSCVAVHCVAGLGRAP-VLVALALIESGMKYEDAIQFIRQKR 140
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 179 LPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSK 234
LP S++ A ++ + K+ +H GL R+ + IAY+ + + L +YD+L S+
Sbjct: 103 LPSLTSIIHAATTK-REKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSR 157
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 183 VSLLEWAISEGKGK-VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+SL++ E G V VHC AGLGRAP V +A GMK + A + KR
Sbjct: 85 LSLVKAKFCEAPGSCVAVHCVAGLGRAP-VLVALALIESGMKYEDAIQFIRQKR 137
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 97 LGMNYTQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQ 156
+G +I L +G+ + D + L + +V +IL++ +P++E
Sbjct: 3 MGNGMNKILPGLYIGNF-KDARDAEQLSKN-KVTHILSVHDSA---------RPMLE--- 48
Query: 157 VLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYM 216
G++++ PAAD +L +++ + G+ VHC AG+ R+ + IAY+
Sbjct: 49 --GVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGE-SCLVHCLAGVSRSVTLVIAYI 105
Query: 217 FWFCGMKLDAAYDMLTSKRPCG-PN 240
+ A + + R C PN
Sbjct: 106 MTVTDFGWEDALHTVRAGRSCANPN 130
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRPCGPNKTAIR 245
A+S +G+V VHC G+ R+ + +A++ M L A + + R PN +R
Sbjct: 126 ALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLR 182
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 166 PAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMKLD 225
P D + S +A+ ++ A+ + +G+V VH AG+ R+ + +AY+ ++L+
Sbjct: 54 PVEDNHKADISSWFMEAIEYID-AVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLE 112
Query: 226 AAYDMLTSKRP-CGPN 240
A++ + +R PN
Sbjct: 113 EAFEFVKQRRSIISPN 128
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+ VHC AGLGRAP V +A GMK + A + KR
Sbjct: 120 IAVHCVAGLGRAP-VLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+ VHC AGLGRAP V +A GMK + A + KR
Sbjct: 120 IAVHCVAGLGRAP-VLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 97 LGMNYTQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQ 156
+G T++ L +G+ +D+D L + ++ +I+++ + +P+++
Sbjct: 4 MGNGMTKVLPGLYLGNFIDA-KDLDQLGRN-KITHIISIHESP---------QPLLQD-- 50
Query: 157 VLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYM 216
I ++R P AD ++ + ++ + G G VH AG+ R+ + AY+
Sbjct: 51 ---ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNG-GNCLVHSFAGISRSTTIVTAYV 106
Query: 217 FWFCGMKLDAAYDMLTSKRP 236
G+ + + + RP
Sbjct: 107 MTVTGLGWRDVLEAIKATRP 126
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 191 SEGKGKVYVHCTAGLGRA 208
SEG+G V VHC+AG+GR
Sbjct: 219 SEGRGPVVVHCSAGIGRT 236
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+ VHC AGLGRAP V +A G K + A + KR
Sbjct: 99 IAVHCVAGLGRAP-VLVALALIEGGXKYEDAVQFIRQKR 136
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+ VHC AGLGRAP V +A G K + A + KR
Sbjct: 94 IAVHCVAGLGRAP-VLVALALIEGGXKYEDAVQFIRQKR 131
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 153 ERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVA 212
++C +L R + L +P A+ + +I +G + + T G+ +APA+
Sbjct: 52 DQCDIL-----RLDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGT-GVNKAPAIV 105
Query: 213 IAYMFWFCGMKLDAAYDMLTSKRPC 237
IA++ ++ + A++ + P
Sbjct: 106 IAFLMYYQRLSFINAFNKVQGLYPL 130
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 191 SEGKGKVYVHCTAGLGRA 208
S+G+G V VHC+AG+GR
Sbjct: 206 SQGRGPVVVHCSAGIGRT 223
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 28 FLEKKKSKCHLTV-FKNPFKMGKIYCQVSENGIEGKPTSSKVSFKSKNRMEEYNTAMKRM 86
FL+++ + HL + G + V G +GKP + FKS+N + + N +
Sbjct: 96 FLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCC-I 154
Query: 87 MRNPYEYHHDLGMNYTQITDNLIVGSQP-QKPEDIDHLKQEERVAYILNLQQDKDIEYWG 145
H G +Y I +N VG++ PE +D E+ + DI +G
Sbjct: 155 ADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLD----EQIRTDCFESYKWTDIWAFG 210
Query: 146 IDLKPIVERCQVLGIRHMRRP 166
+ L I R V GI RP
Sbjct: 211 LVLWEIARRTIVNGIVEDYRP 231
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 158 LGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYM 216
R + P D +P L P L +W + +HC AG GR + AY+
Sbjct: 75 FNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYL 133
>pdb|1ZCL|A Chain A, Prl-1 C104s Mutant In Complex With Sulfate
pdb|1ZCL|B Chain B, Prl-1 C104s Mutant In Complex With Sulfate
Length = 180
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
+ VH AGLGRAP V +A GMK + A + KR
Sbjct: 120 IAVHSVAGLGRAP-VLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 10/41 (24%)
Query: 195 GKVYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKR 235
G + VHC+AG+GR + +DA DM+ S+R
Sbjct: 226 GAIVVHCSAGVGRTGTFVV----------IDAMLDMMHSER 256
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 197 VYVHCTAGLGRAPAVAIAYMFWFCGMKLDAAYDMLTSKRPCGPNKT 242
+ VHC AGLGRAP + + + + A ++ KR N+T
Sbjct: 112 IGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAINQT 157
>pdb|4A73|A Chain A, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|B Chain B, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|C Chain C, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|D Chain D, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
Length = 310
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 130 AYILNLQQDKDIEYWG---IDLKPIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLL 186
AY+L D ++ W + P++E + G A P+ R+++ + V
Sbjct: 166 AYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARG--------AALSPED-RARIDEGVRRA 216
Query: 187 EWAISEGKGKVYVHCTAGLGR 207
+ I EGKG Y AGL R
Sbjct: 217 AYRIIEGKGATYYGIGAGLAR 237
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 209 SLSPEHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 209 SLSPEHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 215 SLSPEHGPVVVHCSAGIGRSGTFCLA 240
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 209 SLSPEHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 203 SLSPEHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 202 SLSPEHGPVVVHCSAGIGRSGTFCLA 227
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 215 SLSPEHGPVVVHCSAGIGRSGTFCLA 240
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 205 SLSPEHGPVVVHCSAGIGRSGTFCLA 230
>pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1
pdb|1W07|B Chain B, Arabidopsis Thaliana Acyl-Coa Oxidase 1
Length = 659
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 166 PAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRA 208
PA ++ D++ QL A L++ G GKV V TA +GRA
Sbjct: 419 PACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRA 461
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 215 SLSPEHGPVVVHCSAGIGRSGTFCLA 240
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 207 SLSPEHGPVVVHCSAGIGRSGTFCLA 232
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 210 SLSPEHGPVVVHCSAGIGRSGTFCLA 235
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 189 AISEGKGKVYVHCTAGLGRAPAVAIA 214
++S G V VHC+AG+GR+ +A
Sbjct: 237 SLSPEHGPVVVHCSAGIGRSGTFCLA 262
>pdb|3BSH|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant
Y105aY380A IN COMPLEX WITH INHIBITOR ACARBOSE
Length = 414
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLK---QEERVAYILNLQQDKDIEYWGIDL 148
Y+ T NL G+ DIDHL Q E ++L L+ D + W +D
Sbjct: 131 YSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
>pdb|3BSG|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant
Length = 414
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLK---QEERVAYILNLQQDKDIEYWGIDL 148
Y+ T NL G+ DIDHL Q E ++L L+ D + W +D
Sbjct: 131 YSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
>pdb|2QPS|A Chain A, "sugar Tongs" Mutant Y380a In Complex With Acarbose
Length = 405
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLK---QEERVAYILNLQQDKDIEYWGIDL 148
Y+ T NL G+ DIDHL Q E ++L L+ D + W +D
Sbjct: 131 YSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
>pdb|1HT6|A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha-
Amylase Isozyme 1
pdb|1P6W|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1)
In Complex With The Substrate Analogue, Methyl
4i,4ii,4iii- Tri-Thiomaltotetraoside (Thio-Dp4)
pdb|1RPK|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1)
In Complex With Acarbose
Length = 405
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLK---QEERVAYILNLQQDKDIEYWGIDL 148
Y+ T NL G+ DIDHL Q E ++L L+ D + W +D
Sbjct: 131 YSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLKQEERVAYILNLQQDKDIEYWGIDLKPIVERCQVLGI 160
Y +I +++G+ P K L +E V ++ + ++ + + L + + G+
Sbjct: 2 YHRIDHTVLLGALPLK-NMTRRLVLDENVRGVITMNEEYETRF----LCNTSKEWKKAGV 56
Query: 161 RHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMF 217
+R D + L K V + G+ VYVHC AG R+ + AY+
Sbjct: 57 EQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQC-VYVHCKAGRSRSATMVAAYLI 112
>pdb|2QPU|A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose
pdb|2QPU|B Chain B, Sugar Tongs Mutant S378p In Complex With Acarbose
pdb|2QPU|C Chain C, Sugar Tongs Mutant S378p In Complex With Acarbose
Length = 405
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 101 YTQITDNLIVGSQPQKPEDIDHLK---QEERVAYILNLQQDKDIEYWGIDL 148
Y+ T NL G+ DIDHL Q E ++L L+ D + W +D
Sbjct: 131 YSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 150 PIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAP 209
P + C L + +R P DF P + Q+ + V +++ A + G+ V VHC G GR
Sbjct: 48 PHSDSCPGLTLHRLRIP--DFCPPA-PDQIDRFVQIVDEANARGEA-VGVHCALGFGRTG 103
Query: 210 AVAIAYMFWFCGMKLDAAYDMLTSKRP 236
+ Y+ G+ A + RP
Sbjct: 104 TMLACYLVKERGLAAGDAIAEIRRLRP 130
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 150 PIVERCQVLGIRHMRRPAADFDPDSLRSQLPKAVSLLEWAISEGKGKVYVHCTAGLGRAP 209
P + C L + +R P DF P + Q+ + V +++ A + G+ V VHC G GR
Sbjct: 49 PHSDSCPGLTLHRLRIP--DFCPPA-PDQIDRFVQIVDEANARGEA-VGVHCALGFGRTG 104
Query: 210 AVAIAYMFWFCGMKLDAAYDMLTSKRP 236
Y+ G+ A + RP
Sbjct: 105 TXLACYLVKERGLAAGDAIAEIRRLRP 131
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,860,191
Number of Sequences: 62578
Number of extensions: 366806
Number of successful extensions: 950
Number of sequences better than 100.0: 81
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 885
Number of HSP's gapped (non-prelim): 82
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)