BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022903
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 16/217 (7%)
Query: 60 LFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+ +G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHV 80
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
N++ F+G P + IVT+ G SL +L + K ++ ++ A AR MD LHA
Sbjct: 81 NILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IIHRDLK +N+ L D ++K+ DFGLA WMAPE+
Sbjct: 140 SIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV----- 193
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+R + Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 16/217 (7%)
Query: 60 LFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+ +G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H
Sbjct: 14 ITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHV 68
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
N++ F+G P + IVT+ G SL +L + K ++ ++ A AR MD LHA
Sbjct: 69 NILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IIHRDLK +N+ L D ++K+ DFGLA WMAPE+
Sbjct: 128 SIIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV----- 181
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+R + Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 16/217 (7%)
Query: 60 LFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+ +G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHV 80
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
N++ F+G P + IVT+ G SL +L + K ++ ++ A AR MD LHA
Sbjct: 81 NILLFMGYSTAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IIHRDLK +N+ L D ++K+ DFGLA WMAPE+
Sbjct: 140 SIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV----- 193
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+R + Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 68
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 69 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 128 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 181
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 66
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 67 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 126 IHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IR 179
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 71
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 72 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 131 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 184
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 66
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 67 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 126 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 179
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 71
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 72 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 131 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 184
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 86
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 87 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 146 IHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IR 199
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 93
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 94 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 153 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 206
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 94
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 95 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 154 IHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IR 207
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 94
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 95 LLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 154 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 207
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 62 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+G +IG G+ G VY+G++ GD VA+K+LN + + ++ L+ F EV ++ + +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQA-FKNEVGVLRKTRHVNI 66
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ F+G P + IVT+ G SL +L + K ++ ++ A A+ MD LHA I
Sbjct: 67 LLFMGYSTAPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLR 237
IHRDLK +N+ L D ++K+ DFGLA WMAPE+ +R
Sbjct: 126 IHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IR 179
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ + DVY+FGIVL+EL+T +LP+ ++N
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 125/231 (54%), Gaps = 19/231 (8%)
Query: 60 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
L I KIG G+ G V+ + VA+K+L ER F+REV +M R++H N
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV---NEFLREVAIMKRLRHPN 95
Query: 120 LVKFLGA-CKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVALNFALDIARAMDCLHA 177
+V F+GA + P + IVTE L SL + L S +LD L+ A D+A+ M+ LH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 178 NG--IIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXX-XYRWMAPELYST 233
I+HRDLK NLL+ D+K ++K+ DFGL+R WMAPE+
Sbjct: 156 RNPPIVHRDLKSPNLLV--DKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV--- 210
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
LR + N K DVYSFG++LWEL T + P+ ++ Q A FK +
Sbjct: 211 --LRD---EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 122/231 (52%), Gaps = 19/231 (8%)
Query: 60 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
L I KIG G+ G V+ + VA+K+L ER F+REV +M R++H N
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV---NEFLREVAIMKRLRHPN 95
Query: 120 LVKFLGA-CKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVALNFALDIARAMDCLHA 177
+V F+GA + P + IVTE L SL + L S +LD L+ A D+A+ M+ LH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 178 NG--IIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXX-XYRWMAPELYST 233
I+HR+LK NLL+ D+K ++K+ DFGL+R WMAPE+
Sbjct: 156 RNPPIVHRNLKSPNLLV--DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV--- 210
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
LR + N K DVYSFG++LWEL T + P+ ++ Q A FK +
Sbjct: 211 --LRD---EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 28/239 (11%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
++D K + + +G GA G V + ++ + VAIK + S S+ +A FI E+ +S
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--SESERKA-----FIVELRQLS 57
Query: 114 RVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV-ALNFALDIARAM 172
RV H N+VK GAC +P+ +V E G SL L P A+++ L ++ +
Sbjct: 58 RVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 173 DCLHA---NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
LH+ +IHRDLKP NLLL LK+ DFG A WMAPE
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPE 174
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIY 288
++ E +Y+ K DV+S+GI+LWE++T R PF+ + AF++ +++
Sbjct: 175 VF--------EGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVH 219
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 28/239 (11%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
++D K + + +G GA G V + ++ + VAIK + S S+ +A FI E+ +S
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--SESERKA-----FIVELRQLS 56
Query: 114 RVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV-ALNFALDIARAM 172
RV H N+VK GAC +P+ +V E G SL L P A+++ L ++ +
Sbjct: 57 RVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 173 DCLHA---NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
LH+ +IHRDLKP NLLL LK+ DFG A WMAPE
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPE 173
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIY 288
++ E +Y+ K DV+S+GI+LWE++T R PF+ + AF++ +++
Sbjct: 174 VF--------EGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVH 218
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 120/222 (54%), Gaps = 16/222 (7%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
++ + + ++IG G+ G VY+G++ GD VA+K+L + E+ F EV ++
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQF---QAFRNEVAVLR 87
Query: 114 RVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
+ +H N++ F+G + IVT+ G SL K+L ++ K + ++ A A+ MD
Sbjct: 88 KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHL-HVQETKFQMFQLIDIARQTAQGMD 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LHA IIHRD+K +N+ L + ++K+ DFGLA WMAPE+
Sbjct: 147 YLHAKNIIHRDMKSNNIFLH-EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+R + ++ + DVYS+GIVL+EL+T LP+ ++N
Sbjct: 206 -----IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLG 125
IG G GKVY + VA+K D +E +E + + +KH N++ G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIE-NVRQEAKLFAMLKHPNIIALRG 73
Query: 126 AC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI---I 181
C K+P + +V E G L + L R + + +N+A+ IAR M+ LH I I
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 182 HRDLKPDNLLLTP-------DQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
HRDLK N+L+ K LK+ DFGLAR Y WMAPE+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGA-YAWMAPEVIRAS 189
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 281
+G DV+S+G++LWELLT +PF G+ L AY A
Sbjct: 190 MFSKGS--------DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 83
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 84 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 144 DLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 199
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 200 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 81
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 82 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 142 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 197
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 198 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 79
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 140 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 195
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 196 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 222
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 73
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 134 DLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI--- 189
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 190 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 82
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 83 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 143 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 198
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 199 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 79 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 139 DLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 195 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 79
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 140 DLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 195
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 196 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 222
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 73
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 134 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 189
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 190 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 75
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 76 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 136 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 192 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 74
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 75 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 135 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 190
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 191 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 68
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 69 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 129 DLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 184
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 185 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 73
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 134 DLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI--- 189
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 190 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 73
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 134 DLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 189
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 190 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 71
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 190 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 2 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 55
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 114
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 174 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 71
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 190 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 9 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 62
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 121
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 181 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 56
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 115
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 175 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
+DPK L ++G G G V G++ G VAIK++ GS S E FI E +M
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMM 54
Query: 114 RVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
+ H+ LV+ G C K + I+TE + L YL +R ++ L D+ AM
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAM 113
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE- 229
+ L + +HRDL N L+ DQ +K++DFGL+R + RW PE
Sbjct: 114 EYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 230 -LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
+YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 173 LMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
S +DPK L ++G G G V G++ G VAIK++ GS S E FI E
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAK 56
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 115
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 227
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 228 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 276
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A
Sbjct: 175 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y G VA+K L +GS S + F+ E N+M +++H LV+
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRL 69
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L + KL ++ L+ A IA M + IHR
Sbjct: 70 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
+L+ N+L++ D S K+ADFGLAR + +W APE Y T T+
Sbjct: 130 NLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI--- 185
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L E++T+ R+P+ GM+N
Sbjct: 186 -------KSDVWSFGILLTEIVTHGRIPYPGMTN 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query: 39 NGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDER 98
GS+ A ++ K L + IG+G G V G Y VA+K + +T+
Sbjct: 2 GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA- 60
Query: 99 ALLEGRFIREVNMMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKL 156
F+ E ++M++++H NLV+ LG + + IVTE + SL YL S + L
Sbjct: 61 ------FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 114
Query: 157 DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXX 216
L F+LD+ AM+ L N +HRDL N+L++ D + K++DFGL +
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDT 173
Query: 217 XXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPF 267
+W APE LR+ K ++ K DV+SFGI+LWE+ + R+P+
Sbjct: 174 GKLPV--KWTAPE-----ALRE---KKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 21/234 (8%)
Query: 37 VKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSD 96
V G++ A ++ K L + IG+G G V G Y VA+K + +T+
Sbjct: 172 VMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQ 231
Query: 97 ERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPN 154
F+ E ++M++++H NLV+ LG + + IVTE + SL YL S +
Sbjct: 232 A-------FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 155 KLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXX 214
L L F+LD+ AM+ L N +HRDL N+L++ D + K++DFGL +
Sbjct: 285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQ 343
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPF 267
+W APE LR+ K ++ K DV+SFGI+LWE+ + R+P+
Sbjct: 344 DTGKLPV--KWTAPE-----ALRE---KKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNMM 112
++DP L +IG G G V+ G + ++ VAIK + G+ S+E FI E +M
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVM 57
Query: 113 SRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
++ H LV+ G C + + +VTE + L YL + R L LD+
Sbjct: 58 MKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEG 116
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE 229
M L +IHRDL N L+ +Q +K++DFG+ R + +W +PE
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 176 VFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 21/205 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLG 125
IG+G G V G Y VA+K + +T+ F+ E ++M++++H NLV+ LG
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAEASVMTQLRHSNLVQLLG 66
Query: 126 ACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL YL S + L L F+LD+ AM+ L N +HR
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 126
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 243
DL N+L++ D + K++DFGL + +W APE LR+ K
Sbjct: 127 DLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALRE---KK 175
Query: 244 YNNKVDVYSFGIVLWELLT-NRLPF 267
++ K DV+SFGI+LWE+ + R+P+
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VY G + VA+K L + E F++E +M +KH NLV+
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 92
Query: 123 FLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C +P IVTE +P +L YL ++ V L A I+ AM+ L I
Sbjct: 93 LLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLR 237
HRDL N L+ + +K+ADFGL+R + +W APE Y+T ++
Sbjct: 153 HRDLAARNCLVG-ENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI- 210
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
K DV++FG++LWE+ T + P+ G+
Sbjct: 211 ---------KSDVWAFGVLLWEIATYGMSPYPGI 235
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 74
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 135 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY------ 187
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 188 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 71
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 132 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY------ 184
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQ 274
++ K DV++FG++LWE+ T + P+ G+ Q
Sbjct: 185 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 86
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 147 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 199
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 200 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 75
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 136 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 188
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 189 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNMM 112
++DP L +IG G G V+ G + ++ VAIK + G+ S+E FI E +M
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVM 56
Query: 113 SRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEG 115
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE 229
M L +IHRDL N L+ +Q +K++DFG+ R + +W +PE
Sbjct: 116 MAYLEEASVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 175 VFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 78
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 139 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 78
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 139 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY------ 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 75
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 136 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 188
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 189 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 75
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 136 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY------ 188
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 189 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 77
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 138 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 190
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 191 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 21/225 (9%)
Query: 53 LLVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNM 111
+++DP L +IG G G V+ G + ++ VAIK + GS S E FI E +
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS------EDDFIEEAEV 75
Query: 112 MSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCE 134
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 228
M L +IHRDL N L+ +Q +K++DFG+ R + +W +P
Sbjct: 135 GMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
E++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 194 EVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G G G+V+ Y VA+K + GS S E F+ E N+M ++HD LVK
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANVMKTLQHDKLVKL 248
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L S +K L ++F+ IA M + IHR
Sbjct: 249 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ K+ADFGLAR + +W APE + + T+
Sbjct: 309 DLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI--- 364
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L E++T R+P+ GMSN
Sbjct: 365 -------KSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 78
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 139 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G G G+V+ Y VA+K + GS S E F+ E N+M ++HD LVK
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANVMKTLQHDKLVKL 75
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L S +K L ++F+ IA M + IHR
Sbjct: 76 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQG 239
DL+ N+L++ K+ADFGLAR + +W APE + + T+
Sbjct: 136 DLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI--- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L E++T R+P+ GMSN
Sbjct: 192 -------KSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNMM 112
++DP L +IG G G V+ G + ++ VAIK + G+ S+E FI E +M
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVM 56
Query: 113 SRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEG 115
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE 229
M L +IHRDL N L+ +Q +K++DFG+ R + +W +PE
Sbjct: 116 MAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 175 VFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 78
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 139 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNMM 112
++DP L +IG G G V+ G + ++ VAIK + G+ S+E FI E +M
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVM 54
Query: 113 SRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEG 113
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE 229
M L +IHRDL N L+ +Q +K++DFG+ R + +W +PE
Sbjct: 114 MAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 173 VFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLG 125
IG+G G V G Y VA+K + +T+ F+ E ++M++++H NLV+ LG
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAEASVMTQLRHSNLVQLLG 72
Query: 126 ACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL YL S + L L F+LD+ AM+ L N +HR
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 132
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 243
DL N+L++ D + K++DFGL + +W APE LR+
Sbjct: 133 DLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALREAA--- 181
Query: 244 YNNKVDVYSFGIVLWELLT-NRLPF 267
++ K DV+SFGI+LWE+ + R+P+
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 54 LVDPKLLFIGSKIGEGAHGKVYEGRYGDR-IVAIKVLNRGSTSDERALLEGRFIREVNMM 112
++DP L +IG G G V+ G + ++ VAIK + G+ S+E FI E +M
Sbjct: 6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVM 59
Query: 113 SRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 60 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEG 118
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE 229
M L +IHRDL N L+ +Q +K++DFG+ R + +W +PE
Sbjct: 119 MAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
++S Y++K DV+SFG+++WE+ + ++P+E SN
Sbjct: 178 VFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 71
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 132 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY------ 184
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQ 274
++ K DV++FG++LWE+ T + P+ G+ Q
Sbjct: 185 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 65 KIGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G G G+V+ Y VA+K + GS S E F+ E N+M ++HD LVK
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANVMKTLQHDKLVKL 242
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ I+TE + SL +L S +K L ++F+ IA M + IHR
Sbjct: 243 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 302
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YSTVTLRQGEK 241
DL+ N+L++ K+ADFGLAR +W APE + + T+
Sbjct: 303 DLRAANILVSASL-VCKIADFGLARVGAKFPI--------KWTAPEAINFGSFTI----- 348
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L E++T R+P+ GMSN
Sbjct: 349 -----KSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 277
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLR 237
HR+L N L+ + +K+ADFGL+R + +W APE Y+ ++
Sbjct: 338 HRNLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI- 395
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
K DV++FG++LWE+ T + P+ G+
Sbjct: 396 ---------KSDVWAFGVLLWEIATYGMSPYPGI 420
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 319
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL +++ V L A I+ AM+ L I
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLR 237
HR+L N L+ + +K+ADFGL+R + +W APE Y+ ++
Sbjct: 380 HRNLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI- 437
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
K DV++FG++LWE+ T + P+ G+
Sbjct: 438 ---------KSDVWAFGVLLWEIATYGMSPYPGI 462
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 74
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+ E + +L YL +++ V L A I+ AM+ L I
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 135 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY------ 187
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 188 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 71
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+ E + +L YL ++ V L A I+ AM+ L I
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 132 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY------ 184
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQ 274
++ K DV++FG++LWE+ T + P+ G+ Q
Sbjct: 185 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 280
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+TE + +L YL ++ V L A I+ AM+ L I
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HR+L N L+ + +K+ADFGL+R + +W APE +
Sbjct: 341 HRNLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 393
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 394 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 78
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+ E + +L YL +++ V L A I+ AM+ L I
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 139 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+ E + +L YL ++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 65 KIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+G G +G+VYEG + VA+K L + E F++E +M +KH NLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------FLKEAAVMKEIKHPNLVQ 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG C ++P I+ E + +L YL ++ V L A I+ AM+ L I
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQG 239
HRDL N L+ + +K+ADFGL+R + +W APE +
Sbjct: 134 HRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------ 186
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
++ K DV++FG++LWE+ T + P+ G+
Sbjct: 187 --NKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G + G+ VAIK L G+ S E F+ E +M ++KHD LV+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES------FLEEAQIMKKLKHDKLVQL 69
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A +A M + IHR
Sbjct: 70 YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 130 DLRSANILVG-NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI--- 185
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL+T R+P+ GM+N
Sbjct: 186 -------KSDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 35/256 (13%)
Query: 40 GSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRI-------VAIKVLNRG 92
GS +A + + V + + + ++G+G+ G VYEG + VAIK +N
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 93 STSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS 150
++ ER F+ E ++M ++V+ LG P +VI+ EL+ L+ YL S
Sbjct: 61 ASMRERI----EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRS 115
Query: 151 LRPNKLD--------LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLA 202
LRP + L + A +IA M L+AN +HRDL N ++ D ++K+
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIG 174
Query: 203 DFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
DFG+ R RWM+PE +L+ G Y+ DV+SFG+VLWE
Sbjct: 175 DFGMTRDIXETDXXRKGGKGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWE 226
Query: 260 LLT-NRLPFEGMSNLQ 274
+ T P++G+SN Q
Sbjct: 227 IATLAEQPYQGLSNEQ 242
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 40 GSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRI-------VAIKVLNRG 92
GS +A + + V + + + ++G+G+ G VYEG + VAIK +N
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 93 STSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS 150
++ ER F+ E ++M ++V+ LG P +VI+ EL+ L+ YL S
Sbjct: 61 ASMRERI----EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRS 115
Query: 151 LRPNKLD--------LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLA 202
LRP + L + A +IA M L+AN +HRDL N ++ D ++K+
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIG 174
Query: 203 DFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
DFG+ R RWM+PE +L+ G Y+ DV+SFG+VLWE
Sbjct: 175 DFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWE 226
Query: 260 LLT-NRLPFEGMSNLQ 274
+ T P++G+SN Q
Sbjct: 227 IATLAEQPYQGLSNEQ 242
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKIRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 327
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 388 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 443
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 444 -------KSDVWSFGILLTELTTKGRVPYPGMVN 470
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G V G++ G VA+K++ GS S E F +E M ++ H LVKF
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKF 68
Query: 124 LGAC-KDPLMVIVTELLPGMSLRKYLVS----LRPNKLDLHVALNFALDIARAMDCLHAN 178
G C K+ + IVTE + L YL S L P++L L D+ M L ++
Sbjct: 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH 123
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTL 236
IHRDL N L+ D +K++DFG+ R + +W APE++
Sbjct: 124 QFIHRDLAARNCLVDRDL-CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK- 181
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
Y++K DV++FGI++WE+ + ++P++ +N
Sbjct: 182 -------YSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 244
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 305 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 360
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 361 -------KSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 244
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 305 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 360
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 361 -------KSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 68
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 129 DLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI--- 184
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 185 -------KSDVWSFGILLTELTTKGRVPYPGMVN 211
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 71
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 132 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 187
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 188 -------KSDVWSFGILLTELTTKGRVPYPGMVN 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 67
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 128 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 183
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 184 -------KSDVWSFGILLTELTTKGRVPYPGMVN 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 69
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 130 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 185
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 186 -------KSDVWSFGILLTELTTKGRVPYPGMVN 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 26/218 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+ + VAIK+LN T+ +A +E F+ E +M+ + H +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVE--FMDEALIMASMDHPH 101
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
LV+ LG C P + +VT+L+P L +Y+ + N + + LN+ + IA+ M L
Sbjct: 102 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERR 160
Query: 180 IIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVT 235
++HRDL N+L+ +P+ +K+ DFGLAR +WMA E
Sbjct: 161 LVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI---- 214
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + ++ DV+S+G+ +WEL+T P++G+
Sbjct: 215 ----HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLAAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 75
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ + IA M + +HR
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 136 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 192 -------KSDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 26/218 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+ + VAIK+LN T+ +A +E F+ E +M+ + H +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVE--FMDEALIMASMDHPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
LV+ LG C P + +VT+L+P L +Y+ + N + + LN+ + IA+ M L
Sbjct: 79 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERR 137
Query: 180 IIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVT 235
++HRDL N+L+ +P+ +K+ DFGLAR +WMA E
Sbjct: 138 LVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY-- 193
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + ++ DV+S+G+ +WEL+T P++G+
Sbjct: 194 ------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 75
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ + IA M + +HR
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 136 DLRAANILVG-ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI--- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 192 -------KSDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 30 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 85
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEFSFNPSHNPE 144
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 65 KIGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G G G+V+ G Y + VA+K L G+ S + F+ E N+M ++HD LV+
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA------FLEEANLMKTLQHDKLVRL 72
Query: 124 LGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
K+ + I+TE + SL +L S K+ L ++F+ IA M + IH
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 132
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQ 238
RDL+ N+L++ + K+ADFGLAR + +W APE + T+
Sbjct: 133 RDLRAANVLVS-ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI-- 189
Query: 239 GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K +V+SFGI+L+E++T ++P+ G +N
Sbjct: 190 --------KSNVWSFGILLYEIVTYGKIPYPGRTN 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 23/224 (10%)
Query: 60 LFIGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
L +G +IG G G+V+ GR + +VA+K D L+ +F++E ++ + H
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD----LKAKFLQEARILKQYSH 171
Query: 118 DNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N+V+ +G C K P+ IV EL+ G +L + +L + L D A M+ L
Sbjct: 172 PNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---XXXXYRWMAPELYS 232
+ IHRDL N L+T ++ LK++DFG++R +W APE
Sbjct: 230 ESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE--- 285
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
L G Y+++ DV+SFGI+LWE + P+ +SN Q
Sbjct: 286 --ALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 60 LFIGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
L +G +IG G G+V+ GR + +VA+K D L+ +F++E ++ + H
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD----LKAKFLQEARILKQYSH 171
Query: 118 DNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N+V+ +G C K P+ IV EL+ G +L + +L + L D A M+ L
Sbjct: 172 PNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---XXXXYRWMAPELYS 232
+ IHRDL N L+T ++ LK++DFG++R +W APE
Sbjct: 230 ESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE--- 285
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
L G Y+++ DV+SFGI+LWE + P+ +SN Q
Sbjct: 286 --ALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + L +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 77
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 78 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 137 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 196 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 238
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 87
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 88 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 206 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 72
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 73 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 132 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 191 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 233
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 80
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 81 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 199 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 80
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 81 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 199 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 87
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 88 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 206 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IV E + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 78
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 79 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 138 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 197 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 239
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA------FLQEAQVMKKLRHEKLVQL 245
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IVTE + SL +L L L ++ A IA M + +HR
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGL R + +W APE LY T+
Sbjct: 306 DLRAANILVG-ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 361
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 362 -------KSDVWSFGILLTELTTKGRVPYPGMVN 388
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 74
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 75 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 193 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 244
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IV E + SL +L L L ++ A IA M + +HR
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 305 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 360
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 361 -------KSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IV E + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 19 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 74
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 75 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPE 133
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 192
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IV E + SL +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 35/231 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 109
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 110 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N ++ D ++K+ DFG+ R R
Sbjct: 169 IADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 228 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQ 270
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 22 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 77
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 78 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPE 136
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 195
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 23 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 78
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 79 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPE 137
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 196
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 240
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 17/216 (7%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEG++G V + R D RIVAIK + SD+ +++ +RE+ ++ +++H+NLV
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK---KFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
L CK +V E + L + L PN LD V + I + H++ IIH
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH 147
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEK 241
RD+KP+N+L++ +KL DFG AR RW APEL G+
Sbjct: 148 RDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLV------GDV 200
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K Y VDV++ G ++ E+ F G S++ Y
Sbjct: 201 K-YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 30 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 85
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPE 144
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 126
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------ 161
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPE 185
Query: 162 --------LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 244
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 65 KIGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
++G G G+V+ G Y + VA+K L G+ S + F+ E N+M ++HD LV+
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA------FLEEANLMKTLQHDKLVRL 73
Query: 124 LGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
++ + I+TE + SL +L S K+ L ++F+ IA M + IH
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 133
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQ 238
RDL+ N+L++ + K+ADFGLAR + +W APE + T+
Sbjct: 134 RDLRAANVLVS-ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI-- 190
Query: 239 GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L+E++T ++P+ G +N
Sbjct: 191 --------KSDVWSFGILLYEIVTYGKIPYPGRTN 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 70
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPE 129
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 188
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 79
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 199 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 76
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 77 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 137 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 196 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG + VAIK +N ++ ER F+ E ++M
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI----EFLNEASVMKEFNC 74
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALD 167
++V+ LG P +VI+ EL+ L+ YL SLRP + L + A +
Sbjct: 75 HHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYR 224
IA M L+AN +HRDL N + D ++K+ DFG+ R R
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCXVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
WM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 193 WMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQV 236
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 79
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 199 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 30 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 85
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPE 144
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEG--RFIREVNMMSRVKHDNL 120
+IG+G G V++GR +VAIK L G + E ++E F REV +MS + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG- 179
VK G +P +V E +P L L+ + + + V L LDIA ++ +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 180 -IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
I+HRDL+ N+ L D+ + K+ADFGL++ ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN--FQWMAPETIGA- 200
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
E++ Y K D YSF ++L+ +LT PF+ S
Sbjct: 201 -----EEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 79
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 199 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 79
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 199 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 116/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T ++ +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 78
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HRDL N ++ D ++K+ DFG+ R RW
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 198 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 65 KIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+G+G G+V+ G + G VAIK L G+ S E F++E +M +++H+ LV+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQVMKKLRHEKLVQL 78
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ + IV E + L +L L L ++ A IA M + +HR
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 184 DLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQG 239
DL+ N+L+ + K+ADFGLAR + +W APE LY T+
Sbjct: 139 DLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--- 194
Query: 240 EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
K DV+SFGI+L EL T R+P+ GM N
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 117/243 (48%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 117/243 (48%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 28/240 (11%)
Query: 41 SITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTS 95
S+ PQ I R +V ++L GEG G+VYEG Y G++I VA+K + T
Sbjct: 1 SMGGPQYGIAREDVVLNRIL------GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL 54
Query: 96 DERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNK 155
D + +F+ E +M + H ++VK +G ++ I+ EL P L YL N
Sbjct: 55 DNKE----KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNS 109
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
L + + ++L I +AM L + +HRD+ N+L+ + +KL DFGL+R
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SPECVKLGDFGLSRYIEDEDY 168
Query: 216 XXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+WM+PE ++ R+ + DV+ F + +WE+L+ + PF + N
Sbjct: 169 YKASVTRLPIKWMSPE---SINFRR-----FTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 45/233 (19%)
Query: 60 LFIGSKIGEGAHGKVY-------EGRYGDRI--VAIKVLNRGSTSDERALLEGRFIREVN 110
L +G +GEGA G+V + +R+ VA+K+L +T + + L I E+
Sbjct: 30 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME 85
Query: 111 MMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHV------- 160
MM + KH N++ LGAC PL VIV G +LR+YL + P L+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQAREPPGLEYSYNPSHNPE 144
Query: 161 -------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 213
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 214 XXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE L+ + Y ++ DV+SFG++LWE+ T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFT 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 71
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 72 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 131 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 186
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 187 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 31/248 (12%)
Query: 33 SRAVVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIK 87
S +V GS PQ I R +V ++L GEG G+VYEG Y G++I VA+K
Sbjct: 8 SSGLVPRGS---PQYGIAREDVVLNRIL------GEGFFGEVYEGVYTNHKGEKINVAVK 58
Query: 88 VLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKY 147
+ T D + +F+ E +M + H ++VK +G ++ I+ EL P L Y
Sbjct: 59 TCKKDCTLDNKE----KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 114
Query: 148 LVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA 207
L N L + + ++L I +AM L + +HRD+ N+L+ + +KL DFGL+
Sbjct: 115 L-ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SPECVKLGDFGLS 172
Query: 208 RXXXXXXXXXXXXX--XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NR 264
R +WM+PE ++ R+ + DV+ F + +WE+L+ +
Sbjct: 173 RYIEDEDYYKASVTRLPIKWMSPE---SINFRR-----FTTASDVWMFAVCMWEILSFGK 224
Query: 265 LPFEGMSN 272
PF + N
Sbjct: 225 QPFFWLEN 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 9 IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 66
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 124
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 125 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 175
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 176 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 74
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 75 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 134 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 189
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 190 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGD-----RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 449
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 509 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 564
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 565 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 72
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 73 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 132 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 187
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 188 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGD-----RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 69
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 129 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 184
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 185 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEG--RFIREVNMMSRVKHDNL 120
+IG+G G V++GR +VAIK L G + E ++E F REV +MS + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG- 179
VK G +P +V E +P L L+ + + + V L LDIA ++ +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 180 -IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
I+HRDL+ N+ L D+ + K+ADFG ++ ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN--FQWMAPETIGA- 200
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
E++ Y K D YSF ++L+ +LT PF+ S
Sbjct: 201 -----EEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 97
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 98 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 157 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 212
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 213 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 66
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 67 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 126 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 181
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 182 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 69
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 129 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 184
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 185 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGD-----RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 69
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTV 234
+ +HRD+ N+L++ + +KL DFGL+R +WMAPE ++
Sbjct: 129 SKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE---SI 184
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 185 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 79
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HR+L N ++ D ++K+ DFG+ R RW
Sbjct: 140 ADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 199 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 65 KIGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G+ G VYEG D I VA+K +N ++ ER F+ E ++M
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI----EFLNEASVMKGFTC 80
Query: 118 DNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDI 168
++V+ LG K ++V EL+ L+ YL SLRP + L + A +I
Sbjct: 81 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A M L+A +HR+L N ++ D ++K+ DFG+ R RW
Sbjct: 141 ADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
MAPE +L+ G + D++SFG+VLWE+ + P++G+SN Q
Sbjct: 200 MAPE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 53/261 (20%)
Query: 40 GSITAPQLT--IDRSLLVDPKLLF------IGSKIGEGAHGKVYE----GRYGDR----- 82
G++ P L + L DPK F +G +GEG G+V G D+
Sbjct: 1 GAMDTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAV 60
Query: 83 IVAIKVLNRGSTSDERALLEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELL 139
VA+K+L +T + + L + E+ MM + KH N++ LGAC PL VIV
Sbjct: 61 TVAVKMLKDDATEKDLSDL----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 140 PGMSLRKYLVSLRPNKLDLHVALN--------------FALDIARAMDCLHANGIIHRDL 185
G +LR+YL + RP ++ +N +AR M+ L + IHRDL
Sbjct: 117 KG-NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 175
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEK 241
N+L+T + +K+ADFGLAR +WMAPE L+ V
Sbjct: 176 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV------- 227
Query: 242 KHYNNKVDVYSFGIVLWELLT 262
Y ++ DV+SFG+++WE+ T
Sbjct: 228 --YTHQSDVWSFGVLMWEIFT 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEG--RFIREVNMMSRVKHDNL 120
+IG+G G V++GR +VAIK L G + E ++E F REV +MS + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG- 179
VK G +P +V E +P L L+ + + + V L LDIA ++ +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 180 -IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
I+HRDL+ N+ L D+ + K+ADF L++ ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGN--FQWMAPETIG-- 199
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
E++ Y K D YSF ++L+ +LT PF+ S
Sbjct: 200 ----AEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P + K L L +K D + ++A A+ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 183
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEGA G+V G D+ VA+K+L +T + +
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 87 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 141
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +++AD
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMRIAD 200
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 251
Query: 260 LLT 262
+ T
Sbjct: 252 IFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGD-----RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 449
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTV 234
+ +HRD+ N+L++ +KL DFGL+R +WMAPE ++
Sbjct: 509 SKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 564
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 565 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 62 IGSKIGEGAHGKVYEGRYGD-----RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
+G IGEG G V++G Y VAIK + TSD + +F++E M +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDS---VREKFLQEALTMRQFD 69
Query: 117 HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A+ L
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTV 234
+ +HRD+ N+L++ +KL DFGL+R +WMAPE ++
Sbjct: 129 SKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SI 184
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
R+ + + DV+ FG+ +WE+L + + PF+G+ N
Sbjct: 185 NFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 63 GSKIGEGAHGKVYEGRYGDRIVAIKVLNR--GSTSDERALLEGRFIREVNMMSRVKHDNL 120
G+K+GEG G VY+G + VA+K L T++E L+ +F +E+ +M++ +H+NL
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE---LKQQFDQEIKVMAKCQHENL 92
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDIARAMDCLHAN 178
V+ LG D + +V +P SL L L L H+ A A ++ LH N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IHRD+K N+LL + + K++DFGLAR +MAPE
Sbjct: 153 HHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-----A 206
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT 262
LR GE K D+YSFG+VL E++T
Sbjct: 207 LR-GE---ITPKSDIYSFGVVLLEIIT 229
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 95
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 154 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 204
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 205 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 248
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 114/243 (46%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEG G+V G D+ VA+K+L +T + +
Sbjct: 73 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 132
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 133 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 187
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 246
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 247 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 297
Query: 260 LLT 262
+ T
Sbjct: 298 IFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 114/243 (46%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEG G+V G D+ VA+K+L +T + +
Sbjct: 14 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 73
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 74 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 128
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT-ENNVMKIAD 187
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 188 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 238
Query: 260 LLT 262
+ T
Sbjct: 239 IFT 241
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 63 GSKIGEGAHGKVYEGRYGDRIVAIKVLNR--GSTSDERALLEGRFIREVNMMSRVKHDNL 120
G+K+GEG G VY+G + VA+K L T++E L+ +F +E+ +M++ +H+NL
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE---LKQQFDQEIKVMAKCQHENL 92
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDIARAMDCLHAN 178
V+ LG D + +V +P SL L L L H+ A A ++ LH N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IHRD+K N+LL + + K++DFGLAR +MAPE
Sbjct: 153 HHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-----A 206
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT 262
LR GE K D+YSFG+VL E++T
Sbjct: 207 LR-GE---ITPKSDIYSFGVVLLEIIT 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P + K L L +K D + ++A A+ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMI------- 183
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 114/243 (46%), Gaps = 51/243 (20%)
Query: 56 DPKLLF------IGSKIGEGAHGKVYE----GRYGDR-----IVAIKVLNRGSTSDERAL 100
DPK F +G +GEG G+V G D+ VA+K+L +T + +
Sbjct: 16 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 75
Query: 101 LEGRFIREVNMMSRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD 157
L + E+ MM + KH N++ LGAC PL VIV G +LR+YL + RP ++
Sbjct: 76 L----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGME 130
Query: 158 LHVALN--------------FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLAD 203
+N +AR M+ L + IHRDL N+L+T + +K+AD
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIAD 189
Query: 204 FGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
FGLAR +WMAPE L+ V Y ++ DV+SFG+++WE
Sbjct: 190 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWE 240
Query: 260 LLT 262
+ T
Sbjct: 241 IFT 243
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 29 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 86
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 144
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 145 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 195
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 196 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 239
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMI------- 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 223
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 62 IGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I +GEG+ GKV Y G + VA+K++N+ + ++ ++GR RE++ + ++H
Sbjct: 17 IVKTLGEGSFGKVKLAYHTTTGQK-VALKIINKKVLA--KSDMQGRIEREISYLRLLRHP 73
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++K K +I+ G L Y+V + +K+ A F I A++ H +
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 132 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG----- 185
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K + +VDV+S G++L+ +L RLPF+ S
Sbjct: 186 --KLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 28/236 (11%)
Query: 45 PQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERA 99
PQ I R +V ++L GEG G+VYEG Y G++I VA+K + T D +
Sbjct: 1 PQYGIAREDVVLNRIL------GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 54
Query: 100 LLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH 159
+F+ E +M + H ++VK +G ++ I+ EL P L YL N L +
Sbjct: 55 ----KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVL 109
Query: 160 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 219
+ ++L I +AM L + +HRD+ N+L+ + +KL DFGL+R
Sbjct: 110 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 220 XXX--YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+WM+PE ++ R+ + DV+ F + +WE+L+ + PF + N
Sbjct: 169 VTRLPIKWMSPE---SINFRR-----FTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 62 IGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I +GEG+ GKV Y G + VA+K++N+ + ++ ++GR RE++ + ++H
Sbjct: 18 IVKTLGEGSFGKVKLAYHTTTGQK-VALKIINKKVLA--KSDMQGRIEREISYLRLLRHP 74
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++K K +I+ G L Y+V + +K+ A F I A++ H +
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 133 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG----- 186
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K + +VDV+S G++L+ +L RLPF+ S
Sbjct: 187 --KLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 62 IGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I +GEG+ GKV Y G + VA+K++N+ + ++ ++GR RE++ + ++H
Sbjct: 8 IVKTLGEGSFGKVKLAYHTTTGQK-VALKIINKKVLA--KSDMQGRIEREISYLRLLRHP 64
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++K K +I+ G L Y+V + +K+ A F I A++ H +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 123 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG----- 176
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K + +VDV+S G++L+ +L RLPF+ S
Sbjct: 177 --KLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 20/207 (9%)
Query: 63 GSKIGEGAHGKVYEGRYGDRIVAIKVLNR--GSTSDERALLEGRFIREVNMMSRVKHDNL 120
G+K+GEG G VY+G + VA+K L T++E L+ +F +E+ +M++ +H+NL
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE---LKQQFDQEIKVMAKCQHENL 86
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDIARAMDCLHAN 178
V+ LG D + +V +P SL L L L H+ A A ++ LH N
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 146
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVT 235
IHRD+K N+LL + + K++DFGLAR +MAPE
Sbjct: 147 HHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-----A 200
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT 262
LR GE K D+YSFG+VL E++T
Sbjct: 201 LR-GE---ITPKSDIYSFGVVLLEIIT 223
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 183
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 62 IGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I +GEG+ GKV Y G + VA+K++N+ + ++ ++GR RE++ + ++H
Sbjct: 12 IVKTLGEGSFGKVKLAYHTTTGQK-VALKIINKKVLA--KSDMQGRIEREISYLRLLRHP 68
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++K K +I+ G L Y+V + +K+ A F I A++ H +
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 127 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG----- 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K + +VDV+S G++L+ +L RLPF+ S
Sbjct: 181 --KLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 69
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 187
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 188 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 69
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 188 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 67
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L M L+K++ + + L + ++ + + + H++ ++
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP+NLL+ + ++KLADFGLAR W APE+
Sbjct: 127 HRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 179
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 180 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L M L+K++ + + L + ++ + + + H++ ++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP+NLL+ + ++KLADFGLAR W APE+
Sbjct: 129 HRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 95
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 154 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMI------- 204
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 205 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 248
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 63
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 182 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 63
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 182 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R + I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 KVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQDTYKRISRVE 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI------- 183
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 227
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 71
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 130 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI------- 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 181 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 224
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 73
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 131
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 132 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 182
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 11 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 68
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 126
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 127 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 177
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 178 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 57 PKLLFIGSKIGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P L G +G+G G+ + R ++ +K L R +R F++EV +M
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT-----FLKEVKVMRC 63
Query: 115 VKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
++H N++KF+G KD + +TE + G +LR + S+ ++ ++FA DIA M
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMA 122
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--------- 224
LH+ IIHRDL N L+ + K++ +ADFGLAR +
Sbjct: 123 YLHSMNIIHRDLNSHNCLVR-ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 225 ------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
WMAPE+ + + Y+ KVDV+SFGIVL E++
Sbjct: 182 VVGNPYWMAPEMING--------RSYDEKVDVFSFGIVLCEII 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMI------- 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 223
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI------- 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 59
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 177
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 178 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXI------- 183
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 184 -EGRXHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 62 IGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEG--RFIREVNMMSRVKHDN 119
I K+G G VY D I+ IKV + R E RF REV+ S++ H N
Sbjct: 15 IVDKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 120 LVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+V + + D +V E + G +L +Y+ S P L + A+NF I + H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHDM 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPELYSTVTL 236
I+HRD+KP N+L+ + K+LK+ DFG+A+ ++ +PE
Sbjct: 131 RIVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE------- 182
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-VQESI 287
Q + + + D+YS GIVL+E+L PF G + A + A K +Q+S+
Sbjct: 183 -QAKGEATDECTDIYSIGIVLYEMLVGEPPFNG----ETAVSIAIKHIQDSV 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 59
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 178 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI------- 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 52 SLLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFI 106
+ L+ K L + K+G+G+ G V G + G + VA+K L S A+ + FI
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FI 59
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
REVN M + H NL++ G P M +VTEL P SL L + + L L +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX----XXXXXXXXXX 222
+A M L + IHRDL NLLL + +K+ DFGL R
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 274
+ W APE T T +++ D + FG+ LWE+ T + P+ G++ Q
Sbjct: 178 FAWCAPESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+ADFG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + T E+A +E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L ++ D + ++A A+ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHSK 131
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL + + LK+ADFG + ++ PE+
Sbjct: 132 RVIHRDIKPENLLLGSNGE-LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 182
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L PFE + Q Y +V+
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT-YQETYRRISRVE 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 45/241 (18%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 74
Query: 112 MSRVKHD-NLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLR----PNK--------- 155
+ + H N+V LGAC P ++++TE +L YL S R P K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 156 -LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 193
Query: 213 -XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEG 269
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 270 M 270
+
Sbjct: 245 V 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK------LD 157
+ + H N+V LGAC P LMVIV E +L YL S R P K L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 158 LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XX 214
L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 201
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE T+ R Y + DV+SFG++LWE+ + P+ G+
Sbjct: 202 RKGDARLPLKWMAPE---TIFDRV-----YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 71
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+A+FG + ++ PE+
Sbjct: 130 RVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 181 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 118/266 (44%), Gaps = 52/266 (19%)
Query: 62 IGSKIGEGAHGKVYEG------RYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
G +G GA GKV + G I VA+K+L + S ER L + E+ MM++
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL----MSELKMMTQ 104
Query: 115 V-KHDNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRP------------------ 153
+ H+N+V LGAC P+ +I G L YL S R
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 154 ---NKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX 210
N L L FA +A+ M+ L +HRDL N+L+T K +K+ DFGLAR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT-HGKVVKICDFGLARDI 222
Query: 211 XXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-P 266
+WMAPE +L +G Y K DV+S+GI+LWE+ + + P
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPE-----SLFEG---IYTIKSDVWSYGILLWEIFSLGVNP 274
Query: 267 FEGM---SNLQAAYAAAFKVQESIYA 289
+ G+ +N FK+ + YA
Sbjct: 275 YPGIPVDANFYKLIQNGFKMDQPFYA 300
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 45/241 (18%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 74
Query: 112 MSRVKHD-NLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLR----PNK--------- 155
+ + H N+V LGAC P ++++TE +L YL S R P K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 156 -LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 193
Query: 213 -XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEG 269
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 270 M 270
+
Sbjct: 245 V 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 46/258 (17%)
Query: 44 APQLTIDRSLLVDPK-LLFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST- 94
A +L D S P+ L +G +G GA G+V E +G R VA+K+L G+T
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 95 SDERALLEGRFIREVNMMSRVKHD-NLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSL 151
S+ RAL+ E+ ++ + H N+V LGAC P ++++TE +L YL S
Sbjct: 63 SEHRALMS-----ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
Query: 152 R----PNK----------LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK 197
R P K L L + ++ +A+ M+ L + IHRDL N+LL+ ++
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKN 176
Query: 198 SLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSF 253
+K+ DFGLAR +WMAPE ++ V Y + DV+SF
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSF 227
Query: 254 GIVLWELLT-NRLPFEGM 270
G++LWE+ + P+ G+
Sbjct: 228 GVLLWEIFSLGASPYPGV 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 64 SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---HD 118
++IG GA+G VY+ R + VA+K + + L +REV ++ R++ H
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 119 NLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
N+V+ + C ++ + +V E + LR YL P L + R +
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE+
Sbjct: 134 DFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
T Y VD++S G + E+ + F G S
Sbjct: 193 QST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 120/240 (50%), Gaps = 45/240 (18%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS-----ELKI 85
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPD 203
Query: 213 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK------LD 157
+ + H N+V LGAC P LMVIV E +L YL S R P K L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 158 LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XX 214
L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYV 201
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE T+ R Y + DV+SFG++LWE+ + P+ G+
Sbjct: 202 RKGDARLPLKWMAPE---TIFDRV-----YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+A +E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L +K D + ++A A+ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL LK+A+FG + ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMI------- 181
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L + PFE + Q Y +V+
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE 225
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 62 IGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + T E+A +E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G D V ++ E P ++ + L L ++ D + ++A A+ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHSK 131
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLLL + + LK+ADFG + ++ PE+
Sbjct: 132 RVIHRDIKPENLLLGSNGE-LKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMI------- 182
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQ 284
E + ++ KVD++S G++ +E L PFE + Q Y +V+
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT-YQETYRRISRVE 226
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 47/242 (19%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 74
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKD 192
Query: 213 --XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFE 268
+WMAPE ++ V Y + DV+SFG++LWE+ + P+
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 269 GM 270
G+
Sbjct: 244 GV 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 120/241 (49%), Gaps = 46/241 (19%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 84
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 156 -LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 213 -XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEG 269
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 270 M 270
+
Sbjct: 254 V 254
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 47/242 (19%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 120
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKD 238
Query: 213 --XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFE 268
+WMAPE ++ V Y + DV+SFG++LWE+ + P+
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYP 289
Query: 269 GM 270
G+
Sbjct: 290 GV 291
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 47/242 (19%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKD 201
Query: 213 --XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFE 268
+WMAPE ++ V Y + DV+SFG++LWE+ + P+
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 269 GM 270
G+
Sbjct: 253 GV 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 47/242 (19%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKD 201
Query: 213 --XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFE 268
+WMAPE ++ V Y + DV+SFG++LWE+ + P+
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 269 GM 270
G+
Sbjct: 253 GV 254
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 68
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L M L+ ++ + + L + ++ + + + H++ ++
Sbjct: 69 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 128 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 180
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 181 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 118/241 (48%), Gaps = 45/241 (18%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 85
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKD 203
Query: 213 --XXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEG 269
+WMAPE T+ R Y + DV+SFG++LWE+ + P+ G
Sbjct: 204 PDYVRKGDARLPLKWMAPE---TIFDRV-----YTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 270 M 270
+
Sbjct: 256 V 256
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 118/241 (48%), Gaps = 45/241 (18%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK-------- 155
+ + H N+V LGAC P LMVIV E +L YL S R P K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 156 --LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKD 201
Query: 213 --XXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEG 269
+WMAPE T+ R Y + DV+SFG++LWE+ + P+ G
Sbjct: 202 PDYVRKGDARLPLKWMAPE---TIFDRV-----YTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 270 M 270
+
Sbjct: 254 V 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L M L+ ++ + + L + ++ + + + H++ ++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 129 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 68
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP+NLL+ + ++KLADFGLAR W APE+
Sbjct: 128 HRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 180
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 181 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 67
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP+NLL+ + ++KLADFGLAR W APE+
Sbjct: 127 HRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 179
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 180 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G +G G +V+ R R VA+KVL D L RF RE + + H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPA 73
Query: 120 LVKFLGACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+V + PL IV E + G++LR + + P + A+ D +A++
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNF 131
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPEL 230
H NGIIHRD+KP N+L++ ++K+ DFG+AR ++++PE
Sbjct: 132 SHQNGIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
Q + + DVYS G VL+E+LT PF G S + AY
Sbjct: 190 -------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 53 LLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIR 107
+++D LL +G +GEG G V EG G + VA+K + ++S +R + E F+
Sbjct: 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEE--FLS 85
Query: 108 EVNMMSRVKHDNLVKFLGACKD------PLMVIVTELLPGMSLRKYLVSLR----PNKLD 157
E M H N+++ LG C + P +++ + L YL+ R P +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 158 LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XX 214
L L F +DIA M+ L +HRDL N +L D ++ +ADFGL++
Sbjct: 146 LQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR-DDMTVCVADFGLSKKIYSGDYYR 204
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
+W+A E + + Y +K DV++FG+ +WE+ T + P+ G+ N
Sbjct: 205 QGRIAKMPVKWIAIESLA--------DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN 255
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 133 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 185
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 186 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 125 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 177
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 70
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 130 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 182
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 183 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 73
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 133 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG------- 184
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 68
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 128 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 180
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 181 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 125 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 177
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 67
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 127 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC------ 179
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 180 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 125 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 177
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 129 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 59/259 (22%)
Query: 47 LTIDR-SLLVDPKLLF------IGSKIGEGAHGKVYE-------GRYGDRIVAIKVLNRG 92
L++D +L DPK F +G +GEG GKV + GR G VA+K+L
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 93 STSDE-RALLEGRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLV 149
++ E R LL E N++ +V H +++K GAC PL++IV G SLR +L
Sbjct: 65 ASPSELRDLLS-----EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG-SLRGFLR 118
Query: 150 SLR--------------------PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKP 187
R P++ L + ++FA I++ M L ++HRDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAA 178
Query: 188 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKH 243
N+L+ +K +K++DFGL+R +WMA E L+ +
Sbjct: 179 RNILVAEGRK-MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI--------- 228
Query: 244 YNNKVDVYSFGIVLWELLT 262
Y + DV+SFG++LWE++T
Sbjct: 229 YTTQSDVWSFGVLLWEIVT 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG------- 177
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 70
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 130 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 182
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 183 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 67
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 127 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 179
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 180 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 67
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 127 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 179
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 180 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 43/258 (16%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 40 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 95
Query: 113 SRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSL----RKYLVSL-----RPNKLDLHV 160
S + +H+N+V LGAC P++VI G L RK L RP L+L
Sbjct: 96 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRD 153
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 154 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKG 212
Query: 221 XX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---SN 272
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 213 NARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 263
Query: 273 LQAAYAAAFKVQESIYAP 290
+++ + +AP
Sbjct: 264 FYKLVKDGYQMAQPAFAP 281
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 43/258 (16%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 103
Query: 113 SRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSL----RKYLVSL-----RPNKLDLHV 160
S + +H+N+V LGAC P++VI G L RK L RP L+L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRD 161
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 162 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKG 220
Query: 221 XX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---SN 272
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 221 NARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 271
Query: 273 LQAAYAAAFKVQESIYAP 290
+++ + +AP
Sbjct: 272 FYKLVKDGYQMAQPAFAP 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 129 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 68
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 128 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 180
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 181 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+K++ + + L + ++ + + + H++ ++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 125 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 177
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G +G G +V+ R R VA+KVL D L RF RE + + H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPA 73
Query: 120 LVKFLGACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+V + PL IV E + G++LR + + P + A+ D +A++
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNF 131
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPEL 230
H NGIIHRD+KP N++++ ++K+ DFG+AR ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
Q + + DVYS G VL+E+LT PF G S + AY
Sbjct: 190 -------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 59/259 (22%)
Query: 47 LTIDR-SLLVDPKLLF------IGSKIGEGAHGKVYE-------GRYGDRIVAIKVLNRG 92
L++D +L DPK F +G +GEG GKV + GR G VA+K+L
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 93 STSDE-RALLEGRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLV 149
++ E R LL E N++ +V H +++K GAC PL++IV G SLR +L
Sbjct: 65 ASPSELRDLLS-----EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG-SLRGFLR 118
Query: 150 SLR--------------------PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKP 187
R P++ L + ++FA I++ M L ++HRDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178
Query: 188 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKH 243
N+L+ +K +K++DFGL+R +WMA E L+ +
Sbjct: 179 RNILVAEGRK-MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI--------- 228
Query: 244 YNNKVDVYSFGIVLWELLT 262
Y + DV+SFG++LWE++T
Sbjct: 229 YTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 59/259 (22%)
Query: 47 LTIDR-SLLVDPKLLF------IGSKIGEGAHGKVYE-------GRYGDRIVAIKVLNRG 92
L++D +L DPK F +G +GEG GKV + GR G VA+K+L
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 93 STSDE-RALLEGRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLV 149
++ E R LL E N++ +V H +++K GAC PL++IV G SLR +L
Sbjct: 65 ASPSELRDLLS-----EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG-SLRGFLR 118
Query: 150 SLR--------------------PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKP 187
R P++ L + ++FA I++ M L ++HRDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178
Query: 188 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPE-LYSTVTLRQGEKKH 243
N+L+ +K +K++DFGL+R +WMA E L+ +
Sbjct: 179 RNILVAEGRK-MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI--------- 228
Query: 244 YNNKVDVYSFGIVLWELLT 262
Y + DV+SFG++LWE++T
Sbjct: 229 YTTQSDVWSFGVLLWEIVT 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 82 RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACK-----DPLMVIVT 136
R VA+KVL D L RF RE + + H +V + PL IV
Sbjct: 38 RDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVM 95
Query: 137 ELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N++++
Sbjct: 96 EYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-AT 152
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYNNKVDVYS 252
++K+ DFG+AR ++++PE Q + + DVYS
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVDARSDVYS 204
Query: 253 FGIVLWELLTNRLPFEGMSNLQAAY 277
G VL+E+LT PF G S + AY
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 59 LLFIGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV 115
L + +G+GA V+ GR+ GD + AIKV N S + +RE ++ ++
Sbjct: 10 LWLLSDILGQGATANVFRGRHKKTGD-LFAIKVFNNISFLRPVDVQ----MREFEVLKKL 64
Query: 116 KHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNK---LDLHVALNFALDIA 169
H N+VK ++ V++ E P SL Y V P+ L L D+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 170 RAMDCLHANGIIHRDLKPDNLL--LTPDQKSL-KLADFGLARXXXXXXXXXXXXXXYRWM 226
M+ L NGI+HR++KP N++ + D +S+ KL DFG AR ++
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
P++Y LR+ +K Y VD++S G+ + T LPF
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 47/263 (17%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 103
Query: 113 SRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA-------- 161
S + +H+N+V LGAC P++VI TE L +L RP L+
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 162 ------LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSN 221
Query: 216 XXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 270
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI 272
Query: 271 ---SNLQAAYAAAFKVQESIYAP 290
S +++ + +AP
Sbjct: 273 LVNSKFYKLVKDGYQMAQPAFAP 295
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 59 LLFIGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV 115
L + +G+GA V+ GR+ GD + AIKV N S + +RE ++ ++
Sbjct: 10 LWLLSDILGQGATANVFRGRHKKTGD-LFAIKVFNNISFLRPVDVQ----MREFEVLKKL 64
Query: 116 KHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL---DIA 169
H N+VK ++ V++ E P SL Y V P+ F + D+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 170 RAMDCLHANGIIHRDLKPDNLL--LTPDQKSL-KLADFGLARXXXXXXXXXXXXXXYRWM 226
M+ L NGI+HR++KP N++ + D +S+ KL DFG AR ++
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYL 182
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
P++Y LR+ +K Y VD++S G+ + T LPF
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 65 KIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
KIGEG +G VY+ R G+ + K+ R T E + IRE++++ + H N+V
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEG--VPSTAIREISLLKELNHPNIV 65
Query: 122 KFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
K L + + +V E L L+K++ + + L + ++ + + + H++ +
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQG 239
+HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 125 LHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC----- 178
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 --KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 65 KIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
KIGEG +G VY+ R G+ + K+ R T E + IRE++++ + H N+V
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEG--VPSTAIREISLLKELNHPNIV 64
Query: 122 KFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
K L + + +V E L L+K++ + + L + ++ + + + H++ +
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQG 239
+HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 124 LHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC----- 177
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 --KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 56 DPKLLFIGSKIGEGAHGKVYEGRYGDRIVAI---KVLNRGSTSDERALLEGRFIREVNMM 112
D + L +IG G+ VY+G + V + ++ +R T ER RF E +
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ----RFKEEAEXL 79
Query: 113 SRVKHDNLVKFLGACKDPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 167
++H N+V+F + + + +V+VTEL +L+ YL + K+ V ++
Sbjct: 80 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQ 137
Query: 168 IARAMDCLHANG--IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I + + LH IIHRDLK DN+ +T S+K+ D GLA +
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP-EF 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
APE Y ++ Y+ VDVY+FG E T+ P+ N Y
Sbjct: 197 XAPEXY---------EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 64 SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---HD 118
++IG GA+G VY+ R + VA+K + R +E L +REV ++ R++ H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEG--LPISTVREVALLRRLEAFEHP 66
Query: 119 NLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
N+V+ + C ++ + +V E + LR YL P L + R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLL 184
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
T Y VD++S G + E+ + F G S
Sbjct: 185 QST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
+G+G+ G+V + + DRI A+KV+N+ S ++ +REV ++ ++ H N++
Sbjct: 30 LGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDT---STILREVELLKKLDHPNIM 84
Query: 122 KFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
K +D IV EL G L ++ + + H A + + +H + I
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 181 IHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+HRDLKP+N+LL +K +K+ DFGL+ ++APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------- 195
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y+ K DV+S G++L+ LL+ PF G
Sbjct: 196 --RGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 82 RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACK-----DPLMVIVT 136
R VA+KVL D L RF RE + + H +V + PL IV
Sbjct: 38 RDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95
Query: 137 ELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N++++
Sbjct: 96 EYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-AT 152
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYNNKVDVYS 252
++K+ DFG+AR ++++PE Q + + DVYS
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVDARSDVYS 204
Query: 253 FGIVLWELLTNRLPFEGMSNLQAAY 277
G VL+E+LT PF G S + AY
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 63 GSKIGEGAHGKVYEGRYGDRIVAIKVLNR--GSTSDERALLEGRFIREVNMMSRVKHDNL 120
G+K GEG G VY+G + VA+K L T++E L+ +F +E+ + ++ +H+NL
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE---LKQQFDQEIKVXAKCQHENL 83
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDIARAMDCLHAN 178
V+ LG D + +V P SL L L L H A A ++ LH N
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
IHRD+K N+LL + + K++DFGLAR R + Y +
Sbjct: 144 HHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXS---RIVGTTAYXAPEALR 199
Query: 239 GEKKHYNNKVDVYSFGIVLWELLT 262
GE K D+YSFG+VL E++T
Sbjct: 200 GE---ITPKSDIYSFGVVLLEIIT 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 66
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+ ++ + + L + ++ + + + H++ ++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP+NLL+ + ++KLADFGLAR W APE+
Sbjct: 126 HRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 178
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 179 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 25/222 (11%)
Query: 64 SKIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---H 117
++IGEGA+GKV++ R G R VA+K + R T +E L IREV ++ ++ H
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 118 DNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
N+V+ C ++ + +V E + L YL + + + + R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
+D LH++ ++HRDLKP N+L+T +KLADFGLAR + APE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
+ Y VD++S G + E+ + F G S++
Sbjct: 192 L--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 82 RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACK-----DPLMVIVT 136
R VA+KVL D L RF RE + + H +V + PL IV
Sbjct: 55 RDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 112
Query: 137 ELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N++++
Sbjct: 113 EYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-T 169
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYNNKVDVYS 252
++K+ DFG+AR ++++PE Q + + DVYS
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVDARSDVYS 221
Query: 253 FGIVLWELLTNRLPFEGMSNLQAAY 277
G VL+E+LT PF G S + AY
Sbjct: 222 LGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 25/222 (11%)
Query: 64 SKIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---H 117
++IGEGA+GKV++ R G R VA+K + R T +E L IREV ++ ++ H
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 118 DNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
N+V+ C ++ + +V E + L YL + + + + R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
+D LH++ ++HRDLKP N+L+T +KLADFGLAR + APE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
+ Y VD++S G + E+ + F G S++
Sbjct: 192 L--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L L+ ++ + + L + ++ + + + H++ ++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGE 240
HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 129 HRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC------ 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 -KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 64 SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---HD 118
++IG GA+G VY+ R + VA+K + R +E L +REV ++ R++ H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEG--LPISTVREVALLRRLEAFEHP 66
Query: 119 NLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
N+V+ + C ++ + +V E + LR YL P L + R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLL 184
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
T Y VD++S G + E+ + F G S
Sbjct: 185 QST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 60 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
L IG IG+G G+VY GR+ VAI++++ ++++ F REV + +H+N
Sbjct: 35 LEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQL---KAFKREVMAYRQTRHEN 90
Query: 120 LVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIARAMDCLH 176
+V F+GAC P + I+T L G +L Y V +R K LD++ A +I + M LH
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTL--YSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGL---ARXXXXXXXXXXXXXXYRW---MAPEL 230
A GI+H+DLK N+ D + + DFGL + W +APE+
Sbjct: 148 AKGILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 231 YSTVTLRQGEKK-HYNNKVDVYSFGIVLWELLTNRLPFE 268
++ E K ++ DV++ G + +EL PF+
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 64 SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---HD 118
++IG GA+G VY+ R + VA+K + R +E L +REV ++ R++ H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEG--LPISTVREVALLRRLEAFEHP 66
Query: 119 NLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
N+V+ + C ++ + +V E + LR YL P L + R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLL 184
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
T Y VD++S G + E+ + F G S
Sbjct: 185 QST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 18/218 (8%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 69
Query: 123 FLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
L ++ L ++ + L+K++ + + L + ++ + + + H++ +
Sbjct: 70 LLDVIHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQG 239
+HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 128 LHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC----- 181
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 182 --KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 25/222 (11%)
Query: 64 SKIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK---H 117
++IGEGA+GKV++ R G R VA+K + R T +E L IREV ++ ++ H
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 118 DNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
N+V+ C ++ + +V E + L YL + + + + R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
+D LH++ ++HRDLKP N+L+T +KLADFGLAR + APE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
+ Y VD++S G + E+ + F G S++
Sbjct: 192 L--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 65 KIGEGAHGKVY--EGRYGDRIVAIKVL-----NRGSTSDERALLEG---RFIREVNMMSR 114
K+G GA+G+V + + G AIKV+ ++G SD+ +E E++++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 115 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
+ H N++K +D +VTE G L + +++ +K D A N I +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGIC 160
Query: 174 CLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
LH + I+HRD+KP+N+LL ++K+ DFGL+ ++APE+
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
KK YN K DV+S G++++ LL PF G ++
Sbjct: 221 ---------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQND 252
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
+G+G+ G+V + + DRI A+KV+N+ S ++ +REV ++ ++ H N++
Sbjct: 30 LGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDT---STILREVELLKKLDHPNIM 84
Query: 122 KFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
K +D IV EL G L ++ + + H A + + +H + I
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 181 IHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+HRDLKP+N+LL +K +K+ DFGL+ ++APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------- 195
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y+ K DV+S G++L+ LL+ PF G
Sbjct: 196 --RGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G +G G +V+ R R VA+KVL D L RF RE + + H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--RFRREAQNAAALNHPA 73
Query: 120 LVKFLGACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+V + PL IV E + G++LR + + P + A+ D +A++
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNF 131
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPEL 230
H NGIIHRD+KP N++++ ++K+ DFG+AR ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
Q + + DVYS G VL+E+LT PF G S AY
Sbjct: 190 -------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
+G+G+ G+V + + DRI A+KV+N+ S ++ +REV ++ ++ H N++
Sbjct: 30 LGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDT---STILREVELLKKLDHPNIM 84
Query: 122 KFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
K +D IV EL G L ++ + + H A + + +H + I
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 181 IHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+HRDLKP+N+LL +K +K+ DFGL+ ++APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------- 195
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y+ K DV+S G++L+ LL+ PF G
Sbjct: 196 --RGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S IG GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 88
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 89 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 136
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR- 194
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 195 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S++ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKLNHQ 94
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 215 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKLNHQ 108
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 229 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 93
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 214 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 120
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXXX---XXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 181 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 241 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 278
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 108
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 229 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 89
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 90 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 137
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 196 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV RY GD VA+K L S + A L+ +E+ ++ + H+N
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK----KEIEILRNLYHEN 84
Query: 120 LVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+VK+ G C + + ++ E LP SL++YL + NK++L L +A+ I + MD L
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLG 143
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYS 232
+ +HRDL N+L+ + + +K+ DFGL + W APE
Sbjct: 144 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--- 199
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
L Q + + DV+SFG+ L ELLT
Sbjct: 200 --CLMQSK---FYIASDVWSFGVTLHELLT 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 89
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 90 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 137
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYVATRWYR- 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 196 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 110
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 171 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 231 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 268
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 103
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 104 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 151
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 209
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 210 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 85
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 146 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 206 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 243
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV RY GD VA+K L S + A L+ +E+ ++ + H+N
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK----KEIEILRNLYHEN 72
Query: 120 LVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+VK+ G C + + ++ E LP SL++YL + NK++L L +A+ I + MD L
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLG 131
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYS 232
+ +HRDL N+L+ + + +K+ DFGL + W APE
Sbjct: 132 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--- 187
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
L Q + + DV+SFG+ L ELLT
Sbjct: 188 --CLMQSK---FYIASDVWSFGVTLHELLT 212
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 86 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 133
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYVATRWYR- 191
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 102
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 103 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 150
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 208
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 209 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 22/241 (9%)
Query: 49 IDRSLLVDPKLLF-IGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRF 105
ID S L DP +F + +G G +G+VY+GR+ ++ AIKV++ T DE E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDE----EEEI 67
Query: 106 IREVNMMSRVKHD-NLVKFLGAC-------KDPLMVIVTELLPGMSLRKYLVSLRPNKLD 157
+E+NM+ + H N+ + GA D + +V E S+ + + + N L
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 158 LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXX 216
+I R + LH + +IHRD+K N+LLT + +KL DFG+ A+
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRR 186
Query: 217 XXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA 276
WMAPE+ + + Y+ K D++S GI E+ P M ++A
Sbjct: 187 NTFIGTPYWMAPEV---IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 277 Y 277
+
Sbjct: 244 F 244
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 94
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 215 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNAM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 52/269 (19%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 33 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 88
Query: 113 SRV-KHDNLVKFLGACKD--PLMVIVTELLPGMSL----RKYLVSLRPN----------- 154
S + +H+N+V LGAC P++VI G L RK L P+
Sbjct: 89 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 155 -----KLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX 209
L+L L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARD 207
Query: 210 XXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL 265
+WMAPE ++ V Y + DV+S+GI+LWE+ + L
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGL 258
Query: 266 -PFEGM---SNLQAAYAAAFKVQESIYAP 290
P+ G+ S +++ + +AP
Sbjct: 259 NPYPGILVNSKFYKLVKDGYQMAQPAFAP 287
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 93
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 214 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 80 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 127
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 185
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 100
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 161 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 221 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 258
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 94
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 95 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 142
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR- 200
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 201 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 103
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 104 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 151
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMXGXVATRWYR- 209
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 210 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 66 IGEGAHGKVYEGR-YGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G+G +G VY GR +++ +AIK + + + L E E+ + +KH N+V++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE-----EIALHKHLKHKNIVQY 84
Query: 124 LGA-CKDPLMVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG+ ++ + I E +PG SL L S P K + + I + LH N I+
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
HRD+K DN+L+ LK++DFG + R ++MAPE+ + +G
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI-----IDKG- 198
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY--AAAFKVQESI 287
+ Y D++S G + E+ T + PF + QAA FKV I
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI 247
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 65 KIGEGAHGKVYEGRYGD-RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+GEG +G VY+ + RIVA+K + R DE + IRE++++ + H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEG--IPSTAIREISLLKELHHPNIVSL 84
Query: 124 LGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E + L+K L + D + + + + R + H + I+H
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQHRILH 142
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLKP NLL+ D +LKLADFGLAR W Y + G KK
Sbjct: 143 RDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKK 196
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
Y+ VD++S G + E++T + F G+++
Sbjct: 197 -YSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 88
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 89 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 136
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR- 194
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 195 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 57/267 (21%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 103
Query: 113 SRV-KHDNLVKFLGACKD--PLMVI------------------VTELLPGMSLRKYLVSL 151
S + +H+N+V LGAC P++VI V E P ++ +S
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 152 RPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX 211
R DL L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 164 R----DL---LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIM 215
Query: 212 XXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-P 266
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNP 266
Query: 267 FEGM---SNLQAAYAAAFKVQESIYAP 290
+ G+ S +++ + +AP
Sbjct: 267 YPGILVNSKFYKLVKDGYQMAQPAFAP 293
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 80 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 127
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR- 185
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 111
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 172 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 232 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 65 KIGEGAHGKVYEGRYGD-RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
K+GEG +G VY+ + RIVA+K + R DE + IRE++++ + H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEG--IPSTAIREISLLKELHHPNIVSL 84
Query: 124 LGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E + L+K L + D + + + + R + H + I+H
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQHRILH 142
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLKP NLL+ D +LKLADFGLAR W Y + G KK
Sbjct: 143 RDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKK 196
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
Y+ VD++S G + E++T + F G+++
Sbjct: 197 -YSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 134
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 255 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 90
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 91 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 138
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR- 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 197 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 66 IGEGAHGKVYEGR-YGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G+G +G VY GR +++ +AIK + + + L E E+ + +KH N+V++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE-----EIALHKHLKHKNIVQY 70
Query: 124 LGA-CKDPLMVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHANGII 181
LG+ ++ + I E +PG SL L S P K + + I + LH N I+
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
HRD+K DN+L+ LK++DFG + R ++MAPE+ + +G
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI-----IDKGP 185
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY--AAAFKVQESI 287
+ Y D++S G + E+ T + PF + QAA FKV I
Sbjct: 186 RG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 90
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 91 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 138
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR- 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 197 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 90
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 91 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 138
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR- 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 197 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 57/267 (21%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG----DRI--VAIKVLNRGSTSDERALLEGRFIREVNMM 112
L G +G GA GKV E +G D + VA+K+L + +DE+ L + E+ +M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELKIM 103
Query: 113 SRV-KHDNLVKFLGACKD--PLMVI------------------VTELLPGMSLRKYLVSL 151
S + +H+N+V LGAC P++VI V E P ++ S
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 152 RPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX 211
R DL L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 164 R----DL---LHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIM 215
Query: 212 XXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-P 266
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNP 266
Query: 267 FEGM---SNLQAAYAAAFKVQESIYAP 290
+ G+ S +++ + +AP
Sbjct: 267 YPGILVNSKFYKLVKDGYQMAQPAFAP 293
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 90
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 91 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 138
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 197 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 80 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-LI 127
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 185
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 94
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 95 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 142
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 200
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 201 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 25/253 (9%)
Query: 27 GSVEKESRAVVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAI 86
G V + S + P++ + V P+ + S IGEGA+G V D + +
Sbjct: 13 GLVPRGSHMAAAAAAGAGPEMVRGQVFDVGPRYTNL-SYIGEGAYGMVCSAY--DNVNKV 69
Query: 87 KVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLM------VIVTELLP 140
+V + + E R +RE+ ++ R +H+N++ + P + +VT L+
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM- 128
Query: 141 GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLK 200
G L K L + L F I R + +H+ ++HRDLKP NLLL LK
Sbjct: 129 GADLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTXDLK 184
Query: 201 LADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIV 256
+ DFGLAR Y RW APE+ K Y +D++S G +
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI-------MLNSKGYTKSIDIWSVGCI 237
Query: 257 LWELLTNRLPFEG 269
L E+L+NR F G
Sbjct: 238 LAEMLSNRPIFPG 250
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 89
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 90 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 137
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 196 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
Query: 48 TIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVA-IKVLNRGSTSDERALLEGRFI 106
T+D+ +D K + + IG G G+V++ ++ RI V+ R ++E+A
Sbjct: 4 TVDKRFGMDFKEIEL---IGSGGFGQVFKAKH--RIDGKTYVIKRVKYNNEKAE------ 52
Query: 107 REVNMMSRVKHDNLVKFLGA-----------------CKDPLMVIVTELLPGMSLRKYLV 149
REV ++++ H N+V + G K + I E +L +++
Sbjct: 53 REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 150 SLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX 209
R KLD +AL I + +D +H+ +I+RDLKP N+ L D K +K+ DFGL
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV-DTKQVKIGDFGLVTS 171
Query: 210 XXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
R+M+PE S+ + Y +VD+Y+ G++L ELL
Sbjct: 172 LKNDGKRXRSKGTLRYMSPEQISS--------QDYGKEVDLYALGLILAELL 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 95
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 96 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 143
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 201
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 202 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 86 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 133
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 191
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 95
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 96 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 143
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 201
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 202 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 88
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 89 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 136
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 194
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 195 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 103
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 104 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 151
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 209
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 210 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 82
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 83 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 130
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 188
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 189 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD----ELDFLMEALIISKFNHQ 108
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+AR +WM
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 229 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 102
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 103 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 150
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 208
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 209 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 106/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGXVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 28 SVEKESRAVVKNGSITAPQLTIDRSLLVDPKLL---FIGSKIGEGAHGKVYEG--RYGDR 82
S ++E + V A QL +D DP+ FI KIGEG+ G V R +
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPG---DPRSYLDNFI--KIGEGSTGIVCIATVRSSGK 100
Query: 83 IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA--CKDPLMVIVTELLP 140
+VA+K ++ R LL EV +M +H+N+V+ + D L V++ E L
Sbjct: 101 LVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVEMYNSYLVGDELWVVM-EFLE 154
Query: 141 GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLK 200
G +L + R N+ + L + +A+ LHA G+IHRD+K D++LLT D + +K
Sbjct: 155 GGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VK 210
Query: 201 LADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
L+DFG A+ WMAPEL S + Y +VD++S GI++ E
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--------YGPEVDIWSLGIMVIE 262
Query: 260 LLTNRLPFEGMSNLQA 275
++ P+ L+A
Sbjct: 263 MVDGEPPYFNEPPLKA 278
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 106/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 106
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 107 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 154
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMXGYVATRWYR- 212
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 213 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 86 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 133
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 191
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 89
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 90 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 137
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 196 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 106
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 107 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 154
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 212
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 213 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 65 KIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
K+G G + VY+G ++ + V + D IRE+++M +KH+N+V+
Sbjct: 12 KLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 125 GAC-KDPLMVIVTELLPGMSLRKYL----VSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + +V E + L+KY+ V P L+L++ F + + + H N
Sbjct: 70 DVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
I+HRDLKP NLL+ + LKL DFGLAR W Y + G
Sbjct: 129 ILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLW-----YRAPDVLMG 182
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+ Y+ +D++S G +L E++T + F G ++
Sbjct: 183 SRT-YSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 85
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 86 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 133
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 191
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+ +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 38 APVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 93
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 94 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 141
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 199
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 200 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 239
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 27/247 (10%)
Query: 38 KNGSITAPQLTIDRSLLVD---PKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNR 91
++G +T Q ++VD P+LL KIGEG+ G V R + R VA+K+++
Sbjct: 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDL 80
Query: 92 GSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLV 149
R LL EV +M +H N+V+ + + L V++ E L G +L +
Sbjct: 81 -RKQQRRELL----FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQGGALTDIVS 134
Query: 150 SLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-AR 208
+R N+ + L +A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+
Sbjct: 135 QVRLNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQ 190
Query: 209 XXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
WMAPE+ S + Y +VD++S GI++ E++ P+
Sbjct: 191 ISKDVPKRKXLVGTPYWMAPEVIS--------RSLYATEVDIWSLGIMVIEMVDGEPPYF 242
Query: 269 GMSNLQA 275
S +QA
Sbjct: 243 SDSPVQA 249
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGL R YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLCRHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 80
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 81 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 128
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 186
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 80
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 81 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 128
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 186
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 88
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 89 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 136
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 194
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 195 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 57 PKLLFIGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
PK + +G GA+G V + R G++ VAIK L+R S+ + R RE+ ++
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEK-VAIKKLSRPFQSE---IFAKRAYRELLLLK 78
Query: 114 RVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKY-----LVSLRPNKLDLHVALNFA--- 165
++H+N++ L P SLR + ++ L + L F+
Sbjct: 79 HMQHENVIGLLDV-----------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 166 -----LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ + + +H+ G++HRDLKP NL + D + LK+ DFGLAR
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVT 186
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
YR APE+ + HYN VD++S G ++ E+LT + F+G L
Sbjct: 187 RWYR--APEVILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 26 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 81
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 82 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 129
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 187
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 188 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 28 SVEKESRAVVKNGSITAPQLTIDRSLLVDPKLL---FIGSKIGEGAHGKVYEG--RYGDR 82
S ++E + V A QL +D DP+ FI KIGEG+ G V R +
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPG---DPRSYLDNFI--KIGEGSTGIVCIATVRSSGK 177
Query: 83 IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA--CKDPLMVIVTELLP 140
+VA+K ++ R LL EV +M +H+N+V+ + D L V++ E L
Sbjct: 178 LVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVEMYNSYLVGDELWVVM-EFLE 231
Query: 141 GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLK 200
G +L + R N+ + L + +A+ LHA G+IHRD+K D++LLT D + +K
Sbjct: 232 GGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VK 287
Query: 201 LADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
L+DFG A+ WMAPEL S + Y +VD++S GI++ E
Sbjct: 288 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--------YGPEVDIWSLGIMVIE 339
Query: 260 LLTNRLPFEGMSNLQA 275
++ P+ L+A
Sbjct: 340 MVDGEPPYFNEPPLKA 355
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 47/246 (19%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IGEGA G+V++ R +VA+K+L +++D ++ F RE +M+ +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD----MQADFQREAALMAEFDNP 110
Query: 119 NLVKFLGACK--DPLMVIVTELLPG---------------------MSLRKYLVSLRPNK 155
N+VK LG C P+ ++ + G +S R + S P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
L L A +A M L +HRDL N L+ + +K+ADFGL+R
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADFGLSRNIYSADY 229
Query: 216 XXXX---XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMS 271
RWM PE S R Y + DV+++G+VLWE+ + L P+ GM+
Sbjct: 230 YKADGNDAIPIRWMPPE--SIFYNR------YTTESDVWAYGVVLWEIFSYGLQPYYGMA 281
Query: 272 NLQAAY 277
+ + Y
Sbjct: 282 HEEVIY 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ R +VA+K + + ++ + IRE++++ + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELNHPNIVK 65
Query: 123 FLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
L ++ L ++ + L+ ++ + + L + ++ + + + H++ +
Sbjct: 66 LLDVIHTENKLYLVFEHV--HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQG 239
+HRDLKP NLL+ + ++KLADFGLAR W APE+
Sbjct: 124 LHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC----- 177
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K+Y+ VD++S G + E++T R F G S + +
Sbjct: 178 --KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
DPK + KIG+GA G VY + VAI+ +N + + I E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-----INEILVM 71
Query: 113 SRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
K+ N+V +L + D L V++ E L G SL + ++ + L +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL---Q 127
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMAPE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + +K Y KVD++S GI+ E++ P+ + L+A Y A
Sbjct: 187 VVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 80 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 127
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 185
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 31/256 (12%)
Query: 28 SVEKESRAVVKNGSITAPQLTIDRSLLVDPKLL---FIGSKIGEGAHGKVYEG--RYGDR 82
S ++E + V A QL +D DP+ FI KIGEG+ G V R +
Sbjct: 3 SPQREPQRVSHEQFRAALQLVVDPG---DPRSYLDNFI--KIGEGSTGIVCIATVRSSGK 57
Query: 83 IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA--CKDPLMVIVTELLP 140
+VA+K ++ R LL EV +M +H+N+V+ + D L V V E L
Sbjct: 58 LVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLE 111
Query: 141 GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLK 200
G +L + R N+ + L + +A+ LHA G+IHRD+K D++LLT D + +K
Sbjct: 112 GGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VK 167
Query: 201 LADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
L+DFG A+ WMAPEL S + Y +VD++S GI++ E
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--------YGPEVDIWSLGIMVIE 219
Query: 260 LLTNRLPFEGMSNLQA 275
++ P+ L+A
Sbjct: 220 MVDGEPPYFNEPPLKA 235
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 65 KIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG+ G V ++ + VA+K ++ R LL EV +M HDN+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDL-RKQQRRELL----FNEVVIMRDYHHDNVVD 106
Query: 123 FLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ D L V V E L G +L + R N+ + L + RA+ LH G+
Sbjct: 107 MYSSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQI---ATVCLSVLRALSYLHNQGV 162
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
IHRD+K D++LLT D + +KL+DFG A+ WMAPE+ S +
Sbjct: 163 IHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP---- 217
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
Y +VD++S GI++ E++ P+ LQA
Sbjct: 218 ----YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
DPK + KIG+GA G VY + VAI+ +N + + I E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-----INEILVM 71
Query: 113 SRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
K+ N+V +L + D L V++ E L G SL + ++ + L +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL---Q 127
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMAPE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + +K Y KVD++S GI+ E++ P+ + L+A Y A
Sbjct: 187 VVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 31/256 (12%)
Query: 28 SVEKESRAVVKNGSITAPQLTIDRSLLVDPKLL---FIGSKIGEGAHGKVYEG--RYGDR 82
S ++E + V A QL +D DP+ FI KIGEG+ G V R +
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPG---DPRSYLDNFI--KIGEGSTGIVCIATVRSSGK 55
Query: 83 IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA--CKDPLMVIVTELLP 140
+VA+K ++ R LL EV +M +H+N+V+ + D L V V E L
Sbjct: 56 LVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLE 109
Query: 141 GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLK 200
G +L + R N+ + L + +A+ LHA G+IHRD+K D++LLT D + +K
Sbjct: 110 GGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VK 165
Query: 201 LADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
L+DFG A+ WMAPEL S + Y +VD++S GI++ E
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--------YGPEVDIWSLGIMVIE 217
Query: 260 LLTNRLPFEGMSNLQA 275
++ P+ L+A
Sbjct: 218 MVDGEPPYFNEPPLKA 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 62 IGSKIGEGAHGKVYEGRYGDRIV--AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I ++G+GA GKVY+ + + V A KV++ S + LE ++ E+++++ H N
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LED-YMVEIDILASCDHPN 95
Query: 120 LVKFLGACK-DPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALDIARAMDCLH 176
+VK L A + + I+ E G ++ ++ L RP + + V LD A++ LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH 152
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
N IIHRDLK N+L T D +KLADFG+ A+ WMAPE+ V
Sbjct: 153 DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV---VM 208
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWEL 260
+ + Y+ K DV+S GI L E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 59 LLFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK 116
L K+G GA G V+ E R IK +N+ + +E E+ ++ +
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA----EIEVLKSLD 78
Query: 117 HDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 173
H N++K +D M IV E G L + +VS R L + A+
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 174 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
H+ ++H+DLKP+N+L T +K+ DFGLA +MAPE++
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 282
K+ K D++S G+V++ LLT LPF G S + A +K
Sbjct: 199 ---------KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V Y+ + G +I A+K L+R S A R RE+ ++ +KH+N+
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKI-AVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 112
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 113 IGLLDV-----------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 160
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 218
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 219 -APEIMLNWM-------HYNMTVDIWSVGCIMAELLTGRTLFPGTDHI 258
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
DPK + KIG+GA G VY + VAI+ +N + + I E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-----INEILVM 71
Query: 113 SRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
K+ N+V +L + D L V++ E L G SL + ++ + L +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL---Q 127
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMAPE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + +K Y KVD++S GI+ E++ P+ + L+A Y A
Sbjct: 187 VVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
DPK + KIG+GA G VY + VAI+ +N + + I E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-----INEILVM 72
Query: 113 SRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
K+ N+V +L + D L V++ E L G SL + ++ + L +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL---Q 128
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMAPE
Sbjct: 129 ALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + +K Y KVD++S GI+ E++ P+ + L+A Y A
Sbjct: 188 VVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 66 IGEGAHGKVYEGRYGDRI-------VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G GA G+VYEG+ VA+K L + + E F+ E ++S+ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD----ELDFLMEALIISKFNHQ 94
Query: 119 NLVKFLGACKDPLM-VIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNFALDIARAM 172
N+V+ +G L I+ EL+ G L+ +L RP + L + L+ A DIA
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 173 DCLHANGIIHRDLKPDNLLLT-PDQ-KSLKLADFGLARXXXXXXXXX---XXXXXYRWMA 227
L N IHRD+ N LLT P + K+ DFG+A+ +WM
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
PE + + + +K D +SFG++LWE+ + +P+ SN
Sbjct: 215 PEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 62 IGSKIGEGAHGKVYEGRYGDRIV--AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I ++G+GA GKVY+ + + V A KV++ S + LE ++ E+++++ H N
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LED-YMVEIDILASCDHPN 95
Query: 120 LVKFLGACK-DPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALDIARAMDCLH 176
+VK L A + + I+ E G ++ ++ L RP + + V LD A++ LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH 152
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
N IIHRDLK N+L T D +KLADFG+ A+ WMAPE+ V
Sbjct: 153 DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV---VM 208
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWEL 260
+ + Y+ K DV+S GI L E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 81 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 140 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 190
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 81
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 141 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 191
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 57 PKLLFIGSKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMS 113
PK + +G GA+G V + R G++ VAIK L+R S+ + R RE+ ++
Sbjct: 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEK-VAIKKLSRPFQSE---IFAKRAYRELLLLK 96
Query: 114 RVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKY-----LVSLRPNKLDLHVALNFA--- 165
++H+N++ L P SLR + ++ L + + F+
Sbjct: 97 HMQHENVIGLLDV-----------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK 145
Query: 166 -----LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ + + +H+ G++HRDLKP NL + D + LK+ DFGLAR
Sbjct: 146 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVT 204
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
YR APE+ + HYN VD++S G ++ E+LT + F+G L
Sbjct: 205 RWYR--APEVILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 248
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 81
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 141 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 191
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 103
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 104 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 163 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 213
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 84
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 85 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 144 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 194
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 81
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 141 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 191
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L++ S A R RE+ ++ +KH+N+
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSKPFQSIIHA---KRTYRELRLLKHMKHENV 95
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 96 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 143
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR- 201
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 202 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 85
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 145 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 195
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 88
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 89 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 148 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 198
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 18/205 (8%)
Query: 62 IGSKIGEGAHGKVYEGRYGDRIV--AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I ++G+GA GKVY+ + + V A KV++ S + LE ++ E+++++ H N
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LED-YMVEIDILASCDHPN 95
Query: 120 LVKFLGACK-DPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALDIARAMDCLH 176
+VK L A + + I+ E G ++ ++ L RP + + V LD A++ LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH 152
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
N IIHRDLK N+L T D +KLADFG+ A+ WMAPE+ V
Sbjct: 153 DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV---VM 208
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWEL 260
+ + Y+ K DV+S GI L E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 231 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 72
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 73 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 132 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 182
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ R VAIK++++ + + REV +M + H N+VK
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKL 79
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + ++ E G + YLV+ ++ A + I A+ H I+H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKRIVH 137
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 138 RDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF------QG-KK 189
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ D+GLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDYGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ R VAIK++++ + + REV +M + H N+VK
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKL 76
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + ++ E G + YLV+ ++ A + I A+ H I+H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKRIVH 134
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 135 RDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELF------QG-KK 186
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 115
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 174
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 235 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 267
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 65 KIGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GEGA GKV+ + +VA+K L + + + F RE +++ ++H
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD-----FQREAELLTNLQH 76
Query: 118 DNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPN--------------KLDLHVA 161
+++VKF G C DPL ++V E + L K+L + P+ +L L
Sbjct: 77 EHIVKFYGVCGDGDPL-IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 162 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX--- 218
L+ A IA M L + +HRDL N L+ + +K+ DFG++R
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLATRNCLVGANL-LVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 219 XXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
RWM PE ++ R+ + + DV+SFG++LWE+ T + P+ +SN +
Sbjct: 195 TMLPIRWMPPE---SIMYRK-----FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 231 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 105
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 225 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 156
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 215
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 276 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 308
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 113
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 172
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 233 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 265
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 65 KIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG+ G V R ++VA+K ++ R LL EV +M +H+N+V+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVE 85
Query: 123 FLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ D L V V E L G +L + R N+ + L + +A+ LHA G+
Sbjct: 86 MYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGV 141
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
IHRD+K D++LLT D + +KL+DFG A+ WMAPEL S +
Sbjct: 142 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---- 196
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
Y +VD++S GI++ E++ P+ L+A
Sbjct: 197 ----YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 82
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 202 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 65 KIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG+ G V R ++VA+K ++ R LL EV +M +H+N+V+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELL----FNEVVIMRDYQHENVVE 81
Query: 123 FLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
+ D L V V E L G +L + R N+ + L + +A+ LHA G+
Sbjct: 82 MYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGV 137
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
IHRD+K D++LLT D + +KL+DFG A+ WMAPEL S +
Sbjct: 138 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---- 192
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
Y +VD++S GI++ E++ P+ L+A
Sbjct: 193 ----YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 209 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 51 RSLLVDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIR 107
++L DP+ LF KIG+G+ G+V++G ++VAIK+++ DE ++ +
Sbjct: 14 QNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----Q 69
Query: 108 EVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
E+ ++S+ + K+ G+ KD + I+ E L G S L L P LD
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR 126
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRW 225
+I + +D LH+ IHRD+K N+LL+ + +KLADFG+A + W
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
MAPE+ ++ Y++K D++S GI EL P + ++ +
Sbjct: 186 MAPEVI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 85
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 205 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 65 KIGEGAHGKVYEGRYGDRIV----AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
K+G GA+G+V R D++ AIK++ + S S + + EV ++ + H N+
Sbjct: 44 KLGSGAYGEVLLCR--DKVTHVERAIKIIRKTSVSTSS---NSKLLEEVAVLKLLDHPNI 98
Query: 121 VKFLGACKDPL-MVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHAN 178
+K +D +V E G L ++ ++ N++D V + L + LH +
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL---SGVTYLHKH 155
Query: 179 GIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
I+HRDLKP+NLLL +K +K+ DFGL+ ++APE+
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL----- 210
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 211 ----RKKYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 209 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G+ G VY+ + D +VAIK + +G R E+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---------ELQIMRKLDHCNIVRL 78
Query: 124 ------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMDC 174
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 198 T-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 96
Query: 123 FL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 155
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 216 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 248
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 65 KIGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GEGA GKV+ + +VA+K L S S + F RE +++ ++H
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-----DFQREAELLTMLQH 102
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNKLDLHVAL 162
++V+F G C + PL+++ + G L ++L S + P L L L
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---X 219
A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 220 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +SN +A
Sbjct: 221 MLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 39/232 (16%)
Query: 65 KIGEGAHGKVYEGRY------GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GEGA GKV+ D+I VA+K L S + + F RE +++ ++H
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK-----DFHREAELLTNLQH 74
Query: 118 DNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPN-----------KLDLHVALNF 164
+++VKF G C DPL ++V E + L K+L + P+ +L L+
Sbjct: 75 EHIVKFYGVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---XXX 221
A IA M L + +HRDL N L+ + +K+ DFG++R
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVG-ENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RWM PE ++ R+ + + DV+S G+VLWE+ T + P+ +SN
Sbjct: 193 PIRWMPPE---SIMYRK-----FTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 90
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 210 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 242
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 16/233 (6%)
Query: 62 IGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I +GEG+ GKV + + VA+K ++R +++ + R RE++ + ++H +
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL--KKSDMHMRVEREISYLKLLRHPH 70
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
++K P +++ G L Y+V + ++ F I A++ H +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
I+HRDLKP+NLLL D ++K+ADFGL+ + APE+ +
Sbjct: 129 IVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING------ 181
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKVQESIYAP 290
K + +VDV+S GIVL+ +L RLPF E + NL + V +P
Sbjct: 182 -KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSP 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 75
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA M+ L
Sbjct: 76 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 135 LVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 185
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 202
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 203 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 46 QLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVA-IKVLNRGSTSDERALLEGR 104
+ T+D+ +D K + + IG G G+V++ ++ RI V+ R ++E+A
Sbjct: 3 KYTVDKRFGMDFKEIEL---IGSGGFGQVFKAKH--RIDGKTYVIRRVKYNNEKAE---- 53
Query: 105 FIREVNMMSRVKHDNLVKFLGA------------------------------CKDPLMVI 134
REV ++++ H N+V + G K + I
Sbjct: 54 --REVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFI 111
Query: 135 VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTP 194
E +L +++ R KLD +AL I + +D +H+ +IHRDLKP N+ L
Sbjct: 112 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV- 170
Query: 195 DQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 254
D K +K+ DFGL R+M+PE S+ + Y +VD+Y+ G
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS--------QDYGKEVDLYALG 222
Query: 255 IVLWELL 261
++L ELL
Sbjct: 223 LILAELL 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 123 FL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 197 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 152
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 153 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 204
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 205 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 263 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 81
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 140
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 201 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ DF LAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFYLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 37/224 (16%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRG---------STSDERALLEGRFIREVNMMSR 114
+G G+ G+V+ R+ R A+KVL + T+DER M+S
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-----------MLSI 62
Query: 115 VKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
V H +++ G +D + ++ + + G L L + + VA +A ++ A++
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCLALE 120
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
LH+ II+RDLKP+N+LL + +K+ DFG A+ Y +APE+ ST
Sbjct: 121 YLHSKDIIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTYXLCGTPDY--IAPEVVST 177
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K YN +D +SFGI+++E+L PF SN Y
Sbjct: 178 --------KPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTY 212
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 197 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V R + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 202
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 203 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
DPK + KIG+GA G VY + VAI+ +N + + I E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-----INEILVM 72
Query: 113 SRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
K+ N+V +L + D L V++ E L G SL + ++ + L +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL---Q 128
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+N +IHR++K DN+LL D S+KL DFG A+ WMAPE
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + +K Y KVD++S GI+ E++ P+ + L+A Y A
Sbjct: 188 VVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 78
Query: 123 FL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 137
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 198 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 197 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 55 VDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNM 111
+DP+ LF KIG+G+ G+V++G ++VAIK+++ DE ++ +E+ +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 58
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+S+ + K+ G+ KD + I+ E L G S L L P LD +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREILK 115
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPE 229
+D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAPE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
+ ++ Y++K D++S GI EL P + ++ +
Sbjct: 175 VI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF 214
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 94
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 95 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 146
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 147 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 205 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 94
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 95 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 146
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 147 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 205 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 65 KIGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GEGA GKV+ + +VA+K L S S + F RE +++ ++H
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-----DFQREAELLTMLQH 73
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNKLDLHVAL 162
++V+F G C + PL+++ + G L ++L S + P L L L
Sbjct: 74 QHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---X 219
A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 220 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +SN +A
Sbjct: 192 MLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 240
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 29 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 144 NVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 199 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 29 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 144 NVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 199 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 92
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 93 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 144
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 145 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 203 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 65 KIGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GEGA GKV+ + +VA+K L S S + F RE +++ ++H
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-----DFQREAELLTMLQH 79
Query: 118 DNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNKLDLHVAL 162
++V+F G C + PL+++ + G L ++L S + P L L L
Sbjct: 80 QHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---X 219
A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 220 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 275
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +SN +A
Sbjct: 198 MLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 246
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 55 VDPKLLF-IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNM 111
+DP ++ I ++G+GA GKVY+ + + + A KV+ S + LE +I E+ +
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LED-YIVEIEI 69
Query: 112 MSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
++ H +VK LGA D + I+ E PG ++ ++ L + + + +
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLE 128
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+ IIHRDLK N+L+T + ++LADFG+ A+ WMAPE
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTL-EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
+ T++ Y+ K D++S GI L E+
Sbjct: 188 VVMCETMKDTP---YDYKADIWSLGITLIEM 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 93
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 94 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 145
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 146 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 204 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVK 122
IG G+ G VY+ + D +VAIK + L + RF RE+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 123 F------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMD 173
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 197 AT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 93
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 94 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 145
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 146 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 204 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 91
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 92 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 143
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 144 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 202 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
+G GA+G V Y+ R + VA+K L+R S A R RE+ ++ +KH+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHA---RRTYRELRLLKHLKHENVIG 91
Query: 123 FLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
L + +D V + L G L + S + D HV + R + +H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS--DEHVQF-LVYQLLRGLKYIH 148
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ GIIHRDLKP N+ + D + L++ DFGLAR YR APE+
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYVATRWYR--APEIMLNWM- 204
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
HYN VD++S G ++ ELL + F G
Sbjct: 205 ------HYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 98
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 99 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 150
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 151 MKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 209 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 93
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 94 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 145
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 146 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 204 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 55 VDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNM 111
+DP+ LF KIG+G+ G+V++G ++VAIK+++ DE ++ +E+ +
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 78
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+S+ + K+ G+ KD + I+ E L G S L L P LD +I +
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREILK 135
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPE 229
+D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAPE
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
+ ++ Y++K D++S GI EL P + ++ +
Sbjct: 195 VI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 111
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 112 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 163
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 164 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 222 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 93
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 94 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 145
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 146 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 204 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 23/252 (9%)
Query: 27 GSVEKESRAVVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAI 86
G V + S + P++ + V P+ + S IGEGA+G V D + +
Sbjct: 13 GLVPRGSHMAAAAAAGAGPEMVRGQVFDVGPRYTNL-SYIGEGAYGMVCSAY--DNVNKV 69
Query: 87 KVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLM-----VIVTELLPG 141
+V + + E R +RE+ ++ R +H+N++ + P + V + + L
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 129
Query: 142 MSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKL 201
L K L + L F I R + +H+ ++HRDLKP NLLL LK+
Sbjct: 130 TDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCDLKI 185
Query: 202 ADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVL 257
DFGLAR Y RW APE+ K Y +D++S G +L
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-------SKGYTKSIDIWSVGCIL 238
Query: 258 WELLTNRLPFEG 269
E+L+NR F G
Sbjct: 239 AEMLSNRPIFPG 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 92
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 93 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 144
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 145 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 203 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 85
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 86 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 137
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 138 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 196 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 112
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 113 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 164
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 165 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 223 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 66 IGEGAHGKVYEGRY---GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRV-KHDNL 120
IGEG G+V + R G R+ AIK + ++ D+ G E+ ++ ++ H N+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG----ELEVLCKLGHHPNI 78
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--------------LNFA 165
+ LGAC+ + + E P +L +L R + D A L+FA
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
D+AR MD L IHRDL N+L+ + + K+ADFGL+R RW
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 226 MAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 271
MA E YS Y DV+S+G++LWE+++ P+ GM+
Sbjct: 198 MAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 21/228 (9%)
Query: 55 VDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNM 111
+DP+ LF KIG+G+ G+V++G ++VAIK+++ DE ++ +E+ +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 58
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+S+ + K+ G+ KD + I+ E L G S L L P LD +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREILK 115
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPE 229
+D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAPE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
+ ++ Y++K D++S GI EL P + ++ +
Sbjct: 175 VI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF 214
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G+ G VY+ + D +VAIK + +G R E+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---------ELQIMRKLDHCNIVRL 78
Query: 124 ------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMDC 174
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 198 T-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 91
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 92 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 143
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 144 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 202 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 90
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 91 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 142
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 143 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 201 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ FGLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILGFGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 55 VDPKLLF-IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNM 111
+DP ++ I ++G+GA GKVY+ + + + A KV+ S + LE +I E+ +
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LED-YIVEIEI 61
Query: 112 MSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
++ H +VK LGA D + I+ E PG ++ ++ L + + + +
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLE 120
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPE 229
A++ LH+ IIHRDLK N+L+T + ++LADFG+ A+ WMAPE
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTL-EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
+ T++ Y+ K D++S GI L E+
Sbjct: 180 VVMCETMKDTP---YDYKADIWSLGITLIEM 207
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 66 IGEGAHGKVYEGRY---GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLV 121
+G GA G VY+G + G+++ + + ++ + +A E + E +M+ V + ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE--ILDEAYVMASVDNPHVC 114
Query: 122 KFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
+ LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L ++
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRRLV 173
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTLRQ 238
HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 174 HRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LES 224
Query: 239 GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 202
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 203 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 41/217 (18%)
Query: 66 IGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV Y +VA+K L + R+ + +E++++ + H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS----GWKQEIDILRTLYHEH 94
Query: 120 LVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
++K+ G C+D + +V E +P SLR YL + + L L FA I M LH
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH 151
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WM 226
A IHRDL N+LL D + +K+ DFGLA+ YR W
Sbjct: 152 AQHYIHRDLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEXYRVREDGDSPVFWY 204
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN 263
APE E K Y DV+SFG+ L+ELLT+
Sbjct: 205 APECLK-------EYKFYYAS-DVWSFGVTLYELLTH 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA+K++++ + + REV +M + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 66 IGEGAHGKVYEGRY---GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRV-KHDNL 120
IGEG G+V + R G R+ AIK + ++ D+ G E+ ++ ++ H N+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG----ELEVLCKLGHHPNI 88
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--------------LNFA 165
+ LGAC+ + + E P +L +L R + D A L+FA
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
D+AR MD L IHRDL N+L+ + + K+ADFGL+R RW
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 226 MAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 271
MA E YS Y DV+S+G++LWE+++ P+ GM+
Sbjct: 208 MAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G+ G VY+ + D +VAIK + +G R E+ +M ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---------ELQIMRKLDHCNIVRL 78
Query: 124 ------LGACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMDC 174
G KD + + +V + +P R ++ + ++V L + + R++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
+H+ GI HRD+KP NLLL PD LKL DFG A+ + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
T Y + +DV+S G VL ELL + F G S +
Sbjct: 198 T-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ R VA+K++++ + + REV +M + H N+VK
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKL 79
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKYIVH 137
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 138 RDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF------QG-KK 189
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 29 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 144 NVLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 199 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 29 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 144 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 199 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 31 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 88
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 146 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 200
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 201 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA+K++++ + + REV +M + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 66 IGEGAHGKVYEGRY----GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG G G VY G G +I A+K LNR + E + +F+ E +M H N+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNV 88
Query: 121 VKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVALNFALDIARA 171
+ LG C PL+V LP M LR ++ + P DL + F L +A+
Sbjct: 89 LSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKG 140
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRW 225
M L + +HRDL N +L D+K ++K+ADFGLAR +W
Sbjct: 141 MKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
MA E T + + K DV+SFG++LWEL+T P
Sbjct: 199 MALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA+K++++ + + REV +M + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 37 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 94
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 152 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 206
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 207 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 29 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 144 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 199 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 82
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 83 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 142 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 192
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 140 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 190
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 23/221 (10%)
Query: 59 LLFIGSKIGEGAHGKVYEGRYGDRI----VAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
LL ++G G G V +G Y R VAIKVL +G+ E+A E +RE +M +
Sbjct: 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTE-EMMREAQIMHQ 66
Query: 115 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+ + +V+ +G C+ +++V E+ G L K+LV R ++ + ++ M
Sbjct: 67 LDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKY 125
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPEL 230
L +HRDL N+LL ++ K++DFGL++ +W APE
Sbjct: 126 LEEKNFVHRDLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE- 183
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ R+ ++++ DV+S+G+ +WE L+ + P++ M
Sbjct: 184 --CINFRK-----FSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 81
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 82 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 141 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 191
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 79
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 80 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 139 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 189
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 27 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 142 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 196
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 197 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 34 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 149 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 203
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 204 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 35 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 92
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 150 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 204
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 205 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 26 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 83
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 141 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 195
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 196 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 202
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 203 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 85
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 145 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 195
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 27 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 142 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 196
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 197 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 81 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 140 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 190
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ D GLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDAGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 85
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 145 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 195
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 78
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++T+L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 138 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 188
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 79
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 80 VCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 139 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 189
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRI-----VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
IG+G G VY G Y D+ AIK L+R + E +E F+RE +M + H N+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEA-FLREGLLMRGLNHPNV 84
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRKYLVSLR-----PNKLDLHVALNFALDIARAMDCL 175
+ +G P + LLP M L +R P DL ++F L +AR M+ L
Sbjct: 85 LALIGIMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL 140
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-----RWMAPEL 230
+HRDL N +L + ++K+ADFGLAR + +W A L
Sbjct: 141 AEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA--L 197
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
S T R + K DV+SFG++LWELLT P
Sbjct: 198 ESLQTYR------FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 55 VDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNM 111
VDP+ LF +IG+G+ G+VY+G + +VAIK+++ DE ++ +E+ +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ----QEITV 70
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+S+ + ++ G+ K + I+ E L G S L L+P L+ +I +
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA---LDLLKPGPLEETYIATILREILK 127
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPE 229
+D LH+ IHRD+K N+LL+ +Q +KLADFG+A + WMAPE
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
+ ++ Y+ K D++S GI EL P
Sbjct: 187 VI--------KQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KCQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 202
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 203 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ D GLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDRGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 64 SKIGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
S +G GA+G V ++ + G R VA+K L+R S A R RE+ ++ +KH+N+
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLR-VAVKKLSRPFQSIIHA---KRTYRELRLLKHMKHENV 83
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL-DLHVALNFA 165
+ L P SL + YLV+ ++ KL D HV
Sbjct: 84 IGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LI 131
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
I R + +H+ IIHRDLKP NL + D + LK+ D GLAR YR
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDGGLARHTDDEMTGYVATRWYR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 190 -APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 24/244 (9%)
Query: 37 VKNGSITAPQLTIDRSLLVDPKLLFIGS-KIGEGAHGKVYEGRYGDRI----VAIKVLNR 91
V + P+ D+ L + L I ++G G G V +G Y R VAIKVL +
Sbjct: 314 VFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ 373
Query: 92 GSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSL 151
G+ E+A E +RE +M ++ + +V+ +G C+ +++V E+ G L K+LV
Sbjct: 374 GT---EKADTE-EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK 429
Query: 152 RPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX-- 209
R ++ + ++ M L +HR+L N+LL ++ K++DFGL++
Sbjct: 430 R-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV-NRHYAKISDFGLSKALG 487
Query: 210 --XXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLP 266
+W APE + R+ ++++ DV+S+G+ +WE L+ + P
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPE---CINFRK-----FSSRSDVWSYGVTMWEALSYGQKP 539
Query: 267 FEGM 270
++ M
Sbjct: 540 YKKM 543
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 65 KIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
++G+G G V RY +VA+K L + R F RE+ ++ ++HD
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHD 74
Query: 119 NLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N+VK+ G C + ++ E LP SLR+YL + ++D L + I + M+ L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK-ERIDHIKLLQYTSQICKGMEYL 133
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPELY 231
IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 134 GTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 193 T--------ESKFSVASDVWSFGVVLYELFT 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA++++++ + + REV +M + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 62 IGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERAL-LEGRFIREVNMMSRVKHD 118
+G +G G GKV G++ VA+K+LNR R+L + G+ RE+ + +H
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI---RSLDVVGKIRREIQNLKLFRHP 76
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
+++K P + +V E + G L Y+ + +LD + I +D H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 178 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
+ ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 135 HMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG---- 189
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + +VD++S G++L+ LL LPF+
Sbjct: 190 ---RLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
+G GA+G V Y+ R + VA+K L+R S A R RE+ ++ +KH+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHA---RRTYRELRLLKHLKHENVIG 91
Query: 123 FLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
L + +D V + L G L +V + D HV + R + +H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNN-IVKCQALS-DEHVQF-LVYQLLRGLKYIH 148
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ GIIHRDLKP N+ + D + L++ DFGLAR YR APE+
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYVATRWYR--APEIMLNWM- 204
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
HYN VD++S G ++ ELL + F G
Sbjct: 205 ------HYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA++++++ + + REV +M + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ ++ A I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 65 KIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG++G V++ R D +IVAIK + S++ +++ +RE+ M+ ++KH NLV
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 123 FLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L + + +V E L + + + H+ + +A++ H + I
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
HRD+KP+N+L+T +KL DFG AR RW Y + L G+
Sbjct: 125 HRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRW-----YRSPELLVGDT 178
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
+ Y VDV++ G V ELL+ + G S++ Y
Sbjct: 179 Q-YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 62 IGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL-LEGRFIREVNMMSRVKH 117
+G +G G GKV G + G + VA+K+LNR R+L + G+ RE+ + +H
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHK-VAVKILNRQKI---RSLDVVGKIKREIQNLKLFRH 70
Query: 118 DNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+++K P +V E + G L Y+ + +++ A I A+D H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCH 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG--- 184
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + +VD++S G++L+ LL LPF+
Sbjct: 185 ----RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 54 LVDPKLLFIG-SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
+ DP+ LF +IG+G+ G+V++G ++VAIK+++ DE ++ +E+
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ----QEIT 73
Query: 111 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
++S+ + K+ G+ K + I+ E L G S L LR D +I
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA---LDLLRAGPFDEFQIATMLKEIL 130
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 228
+ +D LH+ IHRD+K N+LL+ +Q +KLADFG+A + WMAP
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
E+ ++ Y++K D++S GI EL P M ++ +
Sbjct: 190 EVI--------QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 230
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 66 IGEGAHGKVYEGRY---GDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRV-KHDNL 120
IGEG G+V + R G R+ AIK + ++ D+ G E+ ++ ++ H N+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG----ELEVLCKLGHHPNI 85
Query: 121 VKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--------------LNFA 165
+ LGAC+ + + E P +L +L R + D A L+FA
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
D+AR MD L IHR+L N+L+ + + K+ADFGL+R RW
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 226 MAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 271
MA E YS Y DV+S+G++LWE+++ P+ GM+
Sbjct: 205 MAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 66 IGEGAHGKVYEGRYG------DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG G G+VY+G + VAIK L G T +R F+ E +M + H N
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV----DFLGEAGIMGQFSHHN 107
Query: 120 LVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ G K M+I+TE + +L K+L + + + + IA M L
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTV 234
+HRDL N+L+ + K++DFGL+R RW APE S
Sbjct: 167 NYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY- 224
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+SFGIV+WE++T P+ +SN
Sbjct: 225 -------RKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 66 IGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV Y +VA+K L G R+ + RE+ ++ + H++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ----REIEILRTLYHEH 71
Query: 120 LVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+VK+ G C+D + +V E +P SLR YL + + L L FA I M LH
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLH 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WM 226
A IHR L N+LL D + +K+ DFGLA+ YR W
Sbjct: 129 AQHYIHRALAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVREDGDSPVFWY 181
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
APE E K Y DV+SFG+ L+ELLT
Sbjct: 182 APECLK-------ECKFYYAS-DVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 66 IGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV Y +VA+K L G R+ + RE+ ++ + H++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ----REIEILRTLYHEH 72
Query: 120 LVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+VK+ G C+D + +V E +P SLR YL + + L L FA I M LH
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLH 129
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WM 226
A IHR L N+LL D + +K+ DFGLA+ YR W
Sbjct: 130 AQHYIHRALAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVREDGDSPVFWY 182
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
APE E K Y DV+SFG+ L+ELLT
Sbjct: 183 APECLK-------ECKFYYAS-DVWSFGVTLYELLT 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA+K++++ + + REV +M + H N+VK
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL---QKLFREVRIMKVLNHPNIVKL 71
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ K + F I A+ H I+H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMK-EKEARAKFR-QIVSAVQYCHQKFIVH 129
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 130 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KK 181
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ +VDV+S G++L+ L++ LPF+G
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ + YG+ K+ R DE + IRE++++ +KH N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEG--IPSTTIREISILKELKHSNIVK 64
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
+V+V E L L+K L+ + L+ A +F L + + H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
HRDLKP NLL+ + LK+ADFGLAR W Y + G K
Sbjct: 123 HRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSK 176
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K Y+ +D++S G + E++ F G+S
Sbjct: 177 K-YSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ + YG+ K+ R DE + IRE++++ +KH N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEG--IPSTTIREISILKELKHSNIVK 64
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
+V+V E L L+K L+ + L+ A +F L + + H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
HRDLKP NLL+ + LK+ADFGLAR W Y + G K
Sbjct: 123 HRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLW-----YRAPDVLMGSK 176
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K Y+ +D++S G + E++ F G+S
Sbjct: 177 K-YSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ +H+N++
Sbjct: 31 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 146 NVLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 200
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 201 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 65 KIGEGAHGK--VYEGRYGDRIVAIKVLNRGS-TSDERALLEGRFIREVNMMSRVKHDNLV 121
KIGEG+ GK + + R IK +N +S ER E R REV +++ +KH N+V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE--ESR--REVAVLANMKHPNIV 86
Query: 122 KFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGI 180
++ + ++ + IV + G L K + + + L++ + I A+ +H I
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 181 IHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQG 239
+HRD+K N+ LT D +++L DFG+AR +++PE+
Sbjct: 147 LHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI--------C 197
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEG--MSNL 273
E K YNNK D+++ G VL+EL T + FE M NL
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 62 IGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL-LEGRFIREVNMMSRVKH 117
+G +G G GKV G + G + VA+K+LNR R+L + G+ RE+ + +H
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHK-VAVKILNRQKI---RSLDVVGKIKREIQNLKLFRH 70
Query: 118 DNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
+++K P +V E + G L Y+ + +++ A I A+D H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCH 128
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG--- 184
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + +VD++S G++L+ LL LPF+
Sbjct: 185 ----RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G+ GKV + D ++ A+K +N+ ER + F +E+ +M ++H LV
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVF-KELQIMQGLEHPFLVNL 80
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ +D M +V +LL G LR +L V + + L F ++ A+D L
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-----FICELVMALDYLQNQR 135
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
IIHRD+KPDN+LL + + + DF +A +MAPE++S+ R+G
Sbjct: 136 IIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS---RKG 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF 267
Y+ VD +S G+ +ELL R P+
Sbjct: 192 AG--YSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G VY+ + YG+ K+ R DE + IRE++++ +KH N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEG--IPSTTIREISILKELKHSNIVK 64
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
+V+V E L L+K L+ + L+ A +F L + + H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
HRDLKP NLL+ + LK+ADFGLAR W Y + G K
Sbjct: 123 HRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSK 176
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
K Y+ +D++S G + E++ F G+S
Sbjct: 177 K-YSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 101
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 160
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 161 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 220 LT--------ESKFSVASDVWSFGVVLYELFT 243
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
K+GEG + VY+G+ D +VA+K + +E A IREV+++ +KH N+V
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRL--EHEEGAPCTA--IREVSLLKDLKHANIVT 64
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
+ + +V E L L++YL N +++H F + R + H ++
Sbjct: 65 LHDIIHTEKSLTLVFEYL-DKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
HRDLKP NLL+ ++ LKLADFGLAR W P + L +
Sbjct: 123 HRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP---PDILLGSTD- 177
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
Y+ ++D++ G + +E+ T R F G +
Sbjct: 178 --YSTQIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 75
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 134
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 135 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 194 LT--------ESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 77
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 136
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 137 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 196 LT--------ESKFSVASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 73
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA-HAERIDHIKLLQYTSQICKGMEY 132
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 133 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 192 LT--------ESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 68
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 127
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 128 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 187 LT--------ESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 73
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 132
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 133 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 192 LT--------ESKFSVASDVWSFGVVLYELFT 215
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 65 KIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G V++ R IVA+K R D+ + +RE+ ++ +KH N+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
D + +V E L+KY S LD + +F + + + H+ ++
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE--LYSTVTLRQG 239
HRDLKP NLL+ + + LKLADFGLAR W P L+
Sbjct: 124 HRDLKPQNLLINRNGE-LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA------ 176
Query: 240 EKKHYNNKVDVYSFGIVLWEL 260
K Y+ +D++S G + EL
Sbjct: 177 --KLYSTSIDMWSAGCIFAEL 195
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 70
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 129
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 130 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 189 LT--------ESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 70
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 129
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 130 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 189 LT--------ESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 74
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 133
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 134 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 193 LT--------ESKFSVASDVWSFGVVLYELFT 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 65 KIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
++G G G V + D VAIK + + R R+ E+ +M ++ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE----RWCLEIQIMKKLNHPNVVS 77
Query: 123 -------FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL------NFALDIA 169
+ L ++ E G LRKYL N+ + L DI+
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-----NQFENCCGLKEGPIRTLLSDIS 132
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSL--KLADFGLARXXXXXXXXXXXXXXYRWMA 227
A+ LH N IIHRDLKP+N++L P + L K+ D G A+ +++A
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
PEL E+K Y VD +SFG + +E +T PF
Sbjct: 193 PELL--------EQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 88
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 147
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 148 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 207 LT--------ESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 69
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 128
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 129 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 188 LT--------ESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 70
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 129
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 130 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 189 LT--------ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 76
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 135
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 136 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 195 LT--------ESKFSVASDVWSFGVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 88
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 147
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHRDL N+L+ ++ +K+ DFGL + W APE
Sbjct: 148 LGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 207 LT--------ESKFSVASDVWSFGVVLYELFT 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
+G GA+G V Y+ R + VA+K L+R S A R RE+ ++ +KH+N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHA---RRTYRELRLLKHLKHENVIG 83
Query: 123 FLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
L + +D V + L G L +V + D HV + R + +H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNN-IVKCQALS-DEHVQF-LVYQLLRGLKYIH 140
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ GIIHRDLKP N+ + D + L++ DFGLAR YR APE+
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQADEEMTGYVATRWYR--APEIMLNWM- 196
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
HYN VD++S G ++ ELL + F G
Sbjct: 197 ------HYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 65 KIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
++G G G V + D VAIK + + R R+ E+ +M ++ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE----RWCLEIQIMKKLNHPNVVS 76
Query: 123 -------FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL------NFALDIA 169
+ L ++ E G LRKYL N+ + L DI+
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-----NQFENCCGLKEGPIRTLLSDIS 131
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSL--KLADFGLARXXXXXXXXXXXXXXYRWMA 227
A+ LH N IIHRDLKP+N++L P + L K+ D G A+ +++A
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
PEL E+K Y VD +SFG + +E +T PF
Sbjct: 192 PELL--------EQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLN-RGSTSDERALLEGRFIREVNM 111
DP+ LF +IG G+ G VY R +VAIK ++ G S+E+ I+EV
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW---QDIIKEVRF 68
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIA 169
+ +++H N +++ G ++ +V E G + V +P ++++ + AL
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 125
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
+ + LH++ +IHRD+K N+LL+ + +KL DFG A WMAPE
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPANXFVGTPY---WMAPE 181
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + + +G+ Y+ KVDV+S GI EL + P M+ + A Y A
Sbjct: 182 V--ILAMDEGQ---YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 56 DPKLLFIG-SKIGEGAHGKVYEGR--YGDRIVAIKVLN-RGSTSDERALLEGRFIREVNM 111
DP+ LF +IG G+ G VY R +VAIK ++ G S+E+ I+EV
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW---QDIIKEVRF 107
Query: 112 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIA 169
+ +++H N +++ G ++ +V E G + V +P ++++ + AL
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 164
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
+ + LH++ +IHRD+K N+LL+ + +KL DFG A WMAPE
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPANXFVGTPY---WMAPE 220
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA 280
+ + + +G+ Y+ KVDV+S GI EL + P M+ + A Y A
Sbjct: 221 V--ILAMDEGQ---YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 266
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 27/224 (12%)
Query: 56 DPKLLFIGSKIGEGAHGKVY-----EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
DP + +G+G+ GKV+ G ++ A+KVL + + + R E +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV---RTKMERD 79
Query: 111 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFAL 166
++ V H +VK A + + + ++ + L G L L V + ++A
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA----- 134
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 225
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 193
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
MAPE V R+G + D +SFG++++E+LT LPF+G
Sbjct: 194 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ +H+N++
Sbjct: 31 SYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR Y RW APE+
Sbjct: 146 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI---- 200
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 201 ---MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 27/224 (12%)
Query: 56 DPKLLFIGSKIGEGAHGKVY-----EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
DP + +G+G+ GKV+ G ++ A+KVL + + + R E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV---RTKMERD 78
Query: 111 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFAL 166
++ V H +VK A + + + ++ + L G L L V + ++A
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA----- 133
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 225
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
MAPE V R+G + D +SFG++++E+LT LPF+G
Sbjct: 193 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 27/224 (12%)
Query: 56 DPKLLFIGSKIGEGAHGKVY-----EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
DP + +G+G+ GKV+ G ++ A+KVL + + + R E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV---RTKMERD 78
Query: 111 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFAL 166
++ V H +VK A + + + ++ + L G L L V + ++A
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA----- 133
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 225
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
MAPE V R+G + D +SFG++++E+LT LPF+G
Sbjct: 193 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+G KV R+ + VA+K++++ T + L+ + REV + + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK--TQLNSSSLQ-KLFREVRIXKVLNHPNIVKL 78
Query: 124 LGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + + +V E G + YLV+ K + F I A+ H I+H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 183 RDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 242
RDLK +NLLL D ++K+ADFG + + APEL+ QG KK
Sbjct: 137 RDLKAENLLLDADX-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF------QG-KK 188
Query: 243 HYNNKVDVYSFGIVLWELLTNRLPFEGMS 271
+ +VDV+S G++L+ L++ LPF+G +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 85
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 86 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFGLA+ +WMA L
Sbjct: 145 LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------L 195
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 50 DRSLLVDPKLLFIGSKIGEGAHGKVYEGRY---GDR---IVAIKVLNRGSTSDERALLEG 103
D ++ + L +I S++G+G G V RY GD +VA+K L +R
Sbjct: 3 DPTIFEERHLKYI-SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---- 57
Query: 104 RFIREVNMMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
F RE+ ++ + D +VK+ G P + +V E LP LR +L R +LD
Sbjct: 58 -FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASR 115
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
L ++ I + M+ L + +HRDL N+L+ + +K+ADFGLA+
Sbjct: 116 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 221 XXYR----WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ W APE S ++ + DV+SFG+VL+EL T
Sbjct: 175 EPGQSPIFWYAPESLSDNI--------FSRQSDVWSFGVVLYELFT 212
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 140 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 190
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 41/217 (18%)
Query: 66 IGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV Y +VA+K L R+ + +E++++ + H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS----GWKQEIDILRTLYHEH 77
Query: 120 LVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
++K+ G C+D + +V E +P SLR YL + + L L FA I M LH
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH 134
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WM 226
A IHR+L N+LL D + +K+ DFGLA+ YR W
Sbjct: 135 AQHYIHRNLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVREDGDSPVFWY 187
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN 263
APE E K Y DV+SFG+ L+ELLT+
Sbjct: 188 APECLK-------EYKFYYAS-DVWSFGVTLYELLTH 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 50 DRSLLVDPKLLFIGSKIGEGAHGKVYEGRY---GDR---IVAIKVLNRGSTSDERALLEG 103
D ++ + L +I S++G+G G V RY GD +VA+K L +R
Sbjct: 4 DPTIFEERHLKYI-SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---- 58
Query: 104 RFIREVNMMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
F RE+ ++ + D +VK+ G P + +V E LP LR +L R +LD
Sbjct: 59 -FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASR 116
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
L ++ I + M+ L + +HRDL N+L+ + +K+ADFGLA+
Sbjct: 117 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 221 XXYR----WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ W APE S ++ + DV+SFG+VL+EL T
Sbjct: 176 EPGQSPIFWYAPESLSDNI--------FSRQSDVWSFGVVLYELFT 213
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 140 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 190
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+ + VAIKVL ++ + E +M+ V
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK----EILDEAYVMAGVGSPY 80
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + +VT+L+P L ++ R +L LN+ + IA+ M L
Sbjct: 81 VSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 180 IIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVT 235
++HRDL N+L+ +P+ +K+ DFGLAR +WMA
Sbjct: 140 LVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMA-------- 189
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
L ++ + ++ DV+S+G+ +WEL+T P++G+
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G GA G VY+G + G+++ VAIK L ++ + E +M+ V + +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK----EILDEAYVMASVDNPH 82
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+ + LG C + ++ +L+P L Y+ + N + LN+ + IA+ M+ L
Sbjct: 83 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTL 236
++HRDL N+L+ Q +K+ DFG A+ +WMA L
Sbjct: 142 LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------L 192
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ Y ++ DV+S+G+ +WEL+T P++G+
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 50 DRSLLVDPKLLFIGSKIGEGAHGKVYEGRY---GDR---IVAIKVLNRGSTSDERALLEG 103
D ++ + L +I S++G+G G V RY GD +VA+K L +R
Sbjct: 16 DPTIFEERHLKYI-SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---- 70
Query: 104 RFIREVNMMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
F RE+ ++ + D +VK+ G P + +V E LP LR +L R +LD
Sbjct: 71 -FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASR 128
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
L ++ I + M+ L + +HRDL N+L+ + +K+ADFGLA+
Sbjct: 129 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 221 XXYR----WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ W APE S ++ + DV+SFG+VL+EL T
Sbjct: 188 EPGQSPIFWYAPESLSDNI--------FSRQSDVWSFGVVLYELFT 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 66 IGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEG VY+ R ++IVAIK + G S+ + + +RE+ ++ + H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 124 LGA----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
L A L+ E + ++ + L P+ + ++ + + ++ LH +
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQHW 132
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQ 238
I+HRDLKP+NLLL + LKLADFGLA+ RW APEL +
Sbjct: 133 ILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM-- 189
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
Y VD+++ G +L ELL R+PF
Sbjct: 190 -----YGVGVDMWAVGCILAELLL-RVPF 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 33 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---XXXXXYRWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR RW APE+
Sbjct: 148 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN- 205
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 206 ------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 64 SKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
S IGEGA+G V D + ++V + + E R +RE+ ++ R +H+N++
Sbjct: 34 SYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 124 LGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ P + V + + L L K L + L F I R + +H+
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---XXXXXYRWM-APELYSTV 234
++HRDLKP NLLL LK+ DFGLAR RW APE+
Sbjct: 149 NVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN- 206
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 207 ------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRY---GDR---IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
S++G+G G V RY GD +VA+K L +R F RE+ ++ +
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-----FQREIQILKALHS 67
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
D +VK+ G P + +V E LP LR +L R +LD L ++ I + M+
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEY 126
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L + +HRDL N+L+ + +K+ADFGLA+ + W APE
Sbjct: 127 LGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
S ++ + DV+SFG+VL+EL T
Sbjct: 186 LSDNI--------FSRQSDVWSFGVVLYELFT 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+ +E + RE+ + S ++H N
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHLRHPN 76
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ D + ++ E P L K L + + D + F ++A A+ H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHER 134
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLL+ + LK+ADFG + ++ PE+
Sbjct: 135 KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMI------- 185
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 186 -EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 62 IGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
IG +G+G G VY R I+A+KVL + E+ +E + RE+ + S ++H N
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHLRHPN 75
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ D + ++ E P L K L + + D + F ++A A+ H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHER 133
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP+NLL+ + LK+ADFG + ++ PE+
Sbjct: 134 KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMI------- 184
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 185 -EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGST 94
I QL D L G +G GA GKV E YG VA+K+L +
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 95 SDERALLEGRFIREVNMMSRV-KHDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYL 148
ER L + E+ ++S + H N+V LGAC P +VI G LR+
Sbjct: 90 LTEREAL----MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 149 VSLRPNKLDLHV------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
S +K + L+F+ +A+ M L + IHRDL N+LLT
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT-HG 204
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYS 252
+ K+ DFGLAR +WMAPE +++ V Y + DV+S
Sbjct: 205 RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWS 255
Query: 253 FGIVLWELLT-NRLPFEGM 270
+GI LWEL + P+ GM
Sbjct: 256 YGIFLWELFSLGSSPYPGM 274
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 41/217 (18%)
Query: 66 IGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+GEG GKV Y +VA+K L R+ + +E++++ + H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS----GWKQEIDILRTLYHEH 77
Query: 120 LVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
++K+ G C+D + +V E +P SLR YL + + L L FA I M LH
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH 134
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WM 226
+ IHR+L N+LL D + +K+ DFGLA+ YR W
Sbjct: 135 SQHYIHRNLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVREDGDSPVFWY 187
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN 263
APE E K Y DV+SFG+ L+ELLT+
Sbjct: 188 APECLK-------EYKFYYAS-DVWSFGVTLYELLTH 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGST 94
I QL D L G +G GA GKV E YG VA+K+L +
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 95 SDERALLEGRFIREVNMMSRV-KHDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYL 148
ER L + E+ ++S + H N+V LGAC P +VI G LR+
Sbjct: 85 LTEREAL----MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 149 VSLRPNKLDLHV------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
S +K + L+F+ +A+ M L + IHRDL N+LLT +
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 200
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYS 252
+ K+ DFGLAR +WMAPE +++ V Y + DV+S
Sbjct: 201 IT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWS 250
Query: 253 FGIVLWELLT-NRLPFEGM 270
+GI LWEL + P+ GM
Sbjct: 251 YGIFLWELFSLGSSPYPGM 269
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V GR + VAIK L G T +R F+ E
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR----EFLSEA 68
Query: 110 NMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 168
++M + +H N+++ G + + V I+TE + +L +L L + + + I
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGI 127
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX------ 222
A M L +HRDL N+L+ + K++DFGL+R
Sbjct: 128 ASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + R+ + + D +S+GIV+WE+++ P+ MSN
Sbjct: 187 IRWTAPE---AIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGLAR RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
+G GA+G V +GR G + VAIK L R S+ L R RE+ ++ ++H+N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAK-VAIKKLYRPFQSE---LFAKRAYRELRLLKHMRHENVIG 88
Query: 123 FLGA-CKDPLMVIVTEL---LP--GMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
L D + T+ +P G L K + + KL + + + +H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
A GIIHRDLKP NL + D + LK+ DFGLAR YR APE+
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQADSEMXGXVVTRWYR--APEVILNWM- 201
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
Y VD++S G ++ E++T + F+G +L
Sbjct: 202 ------RYTQTVDIWSVGCIMAEMITGKTLFKGSDHL 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGST 94
I QL D L G +G GA GKV E YG VA+K+L +
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 95 SDERALLEGRFIREVNMMSRV-KHDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYL 148
ER L + E+ ++S + H N+V LGAC P +VI G LR+
Sbjct: 90 LTEREAL----MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 149 VSLRPNKLDLHV------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
S +K + L+F+ +A+ M L + IHRDL N+LLT
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT-HG 204
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYS 252
+ K+ DFGLAR +WMAPE +++ V Y + DV+S
Sbjct: 205 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWS 255
Query: 253 FGIVLWELLT-NRLPFEGM 270
+GI LWEL + P+ GM
Sbjct: 256 YGIFLWELFSLGSSPYPGM 274
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGST 94
I QL D L G +G GA GKV E YG VA+K+L +
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 95 SDERALLEGRFIREVNMMSRV-KHDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYL 148
ER L + E+ ++S + H N+V LGAC P +VI G LR+
Sbjct: 67 LTEREAL----MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 149 VSLRPNKLDLHV------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
S +K + L+F+ +A+ M L + IHRDL N+LLT +
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 182
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYS 252
+ K+ DFGLAR +WMAPE +++ V Y + DV+S
Sbjct: 183 IT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWS 232
Query: 253 FGIVLWELLT-NRLPFEGM 270
+GI LWEL + P+ GM
Sbjct: 233 YGIFLWELFSLGSSPYPGM 251
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFI-REVNMMSRVKHDNLVKFL 124
IG G+ G V++ K++ + ++ L + RF RE+ +M VKH N+V
Sbjct: 48 IGNGSFGVVFQA---------KLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLK 98
Query: 125 ------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVALNFALDIARAMDCL 175
G KD + + +V E +P R ++ L+ L + L + + R++ +
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL-YMYQLLRSLAYI 157
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI HRD+KP NLLL P LKL DFG A+ + APEL T
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGAT 217
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
+Y +D++S G V+ EL+ + F G S +
Sbjct: 218 -------NYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGST 94
I QL D L G +G GA GKV E YG VA+K+L +
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 95 SDERALLEGRFIREVNMMSRV-KHDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYL 148
ER L + E+ ++S + H N+V LGAC P +VI G LR+
Sbjct: 83 LTEREAL----MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 138
Query: 149 VSLRPNKLDLHV------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ 196
S +K + L+F+ +A+ M L + IHRDL N+LLT
Sbjct: 139 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT-HG 197
Query: 197 KSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYS 252
+ K+ DFGLAR +WMAPE +++ V Y + DV+S
Sbjct: 198 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWS 248
Query: 253 FGIVLWELLT-NRLPFEGM 270
+GI LWEL + P+ GM
Sbjct: 249 YGIFLWELFSLGSSPYPGM 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 64 SKIGEGAHGKVYEGRYGD------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++G+G G V RY +VA+K L + R F RE+ ++ ++H
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQH 71
Query: 118 DNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
DN+VK+ G C + ++ E LP SLR YL + ++D L + I + M+
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEY 130
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----WMAPEL 230
L IHR+L N+L+ ++ +K+ DFGL + W APE
Sbjct: 131 LGTKRYIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+ + ++ DV+SFG+VL+EL T
Sbjct: 190 LT--------ESKFSVASDVWSFGVVLYELFT 213
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 65 KIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
KIGEG +G V++ R IVA+K R D+ + +RE+ ++ +KH N+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 123 FLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
D + +V E L+KY S LD + +F + + + H+ ++
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE--LYSTVTLRQG 239
HRDLKP NLL+ + + LKLA+FGLAR W P L+
Sbjct: 124 HRDLKPQNLLINRNGE-LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA------ 176
Query: 240 EKKHYNNKVDVYSFGIVLWEL 260
K Y+ +D++S G + EL
Sbjct: 177 --KLYSTSIDMWSAGCIFAEL 195
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 27/241 (11%)
Query: 45 PQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERA 99
P +++ + +D + I IG G G+V GR + VAIK L G T +R
Sbjct: 1 PWGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 60
Query: 100 LLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDL 158
F+ E ++M + +H N+++ G + + V I+TE + +L +L L + +
Sbjct: 61 ----EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTV 115
Query: 159 HVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX 218
+ IA M L +HRDL N+L+ + K++DFGL+R
Sbjct: 116 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPT 174
Query: 219 XXXX------YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 271
RW APE + R+ + + D +S+GIV+WE+++ P+ MS
Sbjct: 175 YTSSLGGKIPIRWTAPE---AIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMS 226
Query: 272 N 272
N
Sbjct: 227 N 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 27/224 (12%)
Query: 56 DPKLLFIGSKIGEGAHGKVYEGRYGDR-----IVAIKVLNRGSTSDERALLEGRFIREVN 110
DP + +G+G+ GKV+ R R + A+KVL + + + R E +
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV---RTKMERD 82
Query: 111 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFAL 166
+++ V H +VK A + + + ++ + L G L L V + ++A
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA----- 137
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 225
++A +D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY 196
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
MAPE V RQG +++ D +S+G++++E+LT LPF+G
Sbjct: 197 MAPE----VVNRQG----HSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 66 IGEGAHGKVYE-----GRYGDRIVAIKVL-------NRGSTSDERALLEGRFIREVNMMS 113
+G+G +GKV++ G +I A+KVL N T+ +A E N++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA--------ERNILE 76
Query: 114 RVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
VKH +V + A + + ++ E L G L ++ R A + +I+ A+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMAL 134
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX-XXXXXXXXXYRWMAPELY 231
LH GII+RDLKP+N++L Q +KL DFGL + +MAPE
Sbjct: 135 GHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE-- 191
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ +R G +N VD +S G +++++LT PF G
Sbjct: 192 --ILMRSG----HNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
+D K L +K+ E G++++GR+ + +KVL S ++ F E +
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS---RDFNEECPRLRI 63
Query: 115 VKHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
H N++ LGAC+ P ++T +P SL L +D A+ FALD+AR
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARG 123
Query: 172 MDCLHA-NGIIHRD-LKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAP 228
M LH +I R L ++++ D + + +AD + W+AP
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA------WVAP 177
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 282
E L++ + D++SF ++LWEL+T +PF +SN++ A +
Sbjct: 178 E-----ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGL+R RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
++ + I IG G G+V GR D VAIK L G T +R F+ E
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR----DFLSEA 101
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 168
++M + H N+++ G + L +IVTE + SL +L + + + + +
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGV 160
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYR 224
M L G +HRDL N+L+ + K++DFGL+R R
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
W APE + T +++ DV+SFG+V+WE+L P+ M+N
Sbjct: 220 WTAPEAIAFRT--------FSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 66 IGEGAHGKVYE-----GRYGDRIVAIKVL-------NRGSTSDERALLEGRFIREVNMMS 113
+G+G +GKV++ G +I A+KVL N T+ +A E N++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA--------ERNILE 76
Query: 114 RVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
VKH +V + A + + ++ E L G L ++ R A + +I+ A+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMAL 134
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX-XXXXXXXXXYRWMAPELY 231
LH GII+RDLKP+N++L Q +KL DFGL + +MAPE
Sbjct: 135 GHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE-- 191
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ +R G +N VD +S G +++++LT PF G
Sbjct: 192 --ILMRSG----HNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 25/229 (10%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
++ + I IG G G+V GR D VAIK L G T +R F+ E
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR----DFLSEA 101
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 168
++M + H N+++ G + L +IVTE + SL +L + + + + +
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGV 160
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYR 224
M L G +HRDL N+L+ + K++DFGL+R R
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
W APE + T +++ DV+SFG+V+WE+L P+ M+N
Sbjct: 220 WTAPEAIAFRT--------FSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 68
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLR 125
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 185 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V GR G R VAIK L G T +R F+ E
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR----DFLSEA 66
Query: 110 NMMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNF 164
++M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGM 121
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX---- 220
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ MSN
Sbjct: 181 IPIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 68
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLR 125
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 185 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGL+R RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 65 KIGEGAHGKVYEGRYGDRIV----AIKVLNRGS---TSDERALLEGRFIREVNMMSRVKH 117
K+G GA+G+V + D++ AIK++ + S TS+ ALL+ EV ++ ++ H
Sbjct: 11 KLGSGAYGEVLLCK--DKLTGAERAIKIIKKSSVTTTSNSGALLD-----EVAVLKQLDH 63
Query: 118 DNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++ LR ++ A+ + LH
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV-IMKQVLSGTTYLH 121
Query: 177 ANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
+ I+HRDLKP+NLLL + +K+ DFGL+ ++APE+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--- 178
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 179 ------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 85
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLR 142
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 202 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGL+R RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF-- 123
IGEGA+G V D + +V + + E R +RE+ ++ R +H+N++
Sbjct: 51 IGEGAYGMVSSAY--DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 124 ------LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
L A +D V + + L L K L S +L F I R + +H+
Sbjct: 109 ILRASTLEAMRD---VYIVQDLMETDLYKLLKS---QQLSNDHICYFLYQILRGLKYIHS 162
Query: 178 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---XXXXXYRWM-APELYST 233
++HRDLKP NLL+ LK+ DFGLAR RW APE+
Sbjct: 163 ANVLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
K Y +D++S G +L E+L+NR F G
Sbjct: 222 -------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V GR G R VAIK L G T +R F+ E
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR----DFLSEA 60
Query: 110 NMMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNF 164
++M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGM 115
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX---- 220
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ MSN
Sbjct: 175 IPIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V GR G R VAIK L G T +R F+ E
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR----DFLSEA 81
Query: 110 NMMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNF 164
++M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGM 136
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX---- 220
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 137 LRGIGSGMKYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ MSN
Sbjct: 196 IPIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGL+R RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 65 KIGEGAHGKVYEGRYGDRIV----AIKVLNRGS---TSDERALLEGRFIREVNMMSRVKH 117
K+G GA+G+V + D++ AIK++ + S TS+ ALL+ EV ++ ++ H
Sbjct: 28 KLGSGAYGEVLLCK--DKLTGAERAIKIIKKSSVTTTSNSGALLD-----EVAVLKQLDH 80
Query: 118 DNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++ LR ++ A+ + LH
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK-QVLSGTTYLH 138
Query: 177 ANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
+ I+HRDLKP+NLLL + +K+ DFGL+ ++APE+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--- 195
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 196 ------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNR---GSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ G+V + D+I A+KV+++ +D+ +LL REV ++ ++ H
Sbjct: 58 LGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHP 110
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++S R +++D A + + +H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 167
Query: 177 ANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE-LYST 233
N I+HRDLKP+NLLL K ++++ DFGL+ ++APE L+ T
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 227
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y+ K DV+S G++L+ LL+ PF G
Sbjct: 228 ----------YDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNR---GSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ G+V + D+I A+KV+++ +D+ +LL REV ++ ++ H
Sbjct: 40 LGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHP 92
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++S R +++D A + + +H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 149
Query: 177 ANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE-LYST 233
N I+HRDLKP+NLLL K ++++ DFGL+ ++APE L+ T
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 209
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y+ K DV+S G++L+ LL+ PF G
Sbjct: 210 ----------YDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 66 IGE-GAHGKVYEGRYGDRIV--AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IGE G GKVY+ + + V A KV++ S + LE ++ E+++++ H N+VK
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE----LED-YMVEIDILASCDHPNIVK 71
Query: 123 FLGACK-DPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALDIARAMDCLHANG 179
L A + + I+ E G ++ ++ L RP + + V LD A++ LH N
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK 128
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPELYSTVTLR 237
IIHRDLK N+L T D +KLADFG++ WMAPE+ V
Sbjct: 129 IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV---VMCE 184
Query: 238 QGEKKHYNNKVDVYSFGIVLWEL 260
+ + Y+ K DV+S GI L E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 97
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLR 154
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 214 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 97
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLR 154
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 214 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNR---GSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ G+V + D+I A+KV+++ +D+ +LL REV ++ ++ H
Sbjct: 57 LGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHP 109
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++S R +++D A + + +H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 166
Query: 177 ANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE-LYST 233
N I+HRDLKP+NLLL K ++++ DFGL+ ++APE L+ T
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 226
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y+ K DV+S G++L+ LL+ PF G
Sbjct: 227 ----------YDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 31/272 (11%)
Query: 16 GEQEQNQHVLRGSVEKES-RAVVKNGSITAPQLTI-DRSLLVDPKLLFIGSKIGEGAHGK 73
G E+ H G ++ R V + P T+ + + +D + I +G G G+
Sbjct: 1 GSDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGE 60
Query: 74 VYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-C 127
V GR + VAIK L G T +R F+ E ++M + H N+++ G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVT 116
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIARAMDCLHANGIIHRDL 185
K ++IVTE + SL +L R + V + IA M L G +HRDL
Sbjct: 117 KSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 186 KPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYRWMAPELYSTVTLRQGEK 241
N+L+ + K++DFGL R RW +PE +
Sbjct: 174 AARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-------- 224
Query: 242 KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
+ + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 97
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLR 154
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 214 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I +G G G+V GR + VAIK L G T +R F+ E
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEA 95
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLR 152
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XX 222
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN
Sbjct: 212 IRWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNR---GSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ G+V + D+I A+KV+++ +D+ +LL REV ++ ++ H
Sbjct: 34 LGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHP 86
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLH 176
N++K +D +V E+ G L ++S R +++D A + + +H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 143
Query: 177 ANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE-LYST 233
N I+HRDLKP+NLLL K ++++ DFGL+ ++APE L+ T
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 203
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y+ K DV+S G++L+ LL+ PF G
Sbjct: 204 ----------YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 25/235 (10%)
Query: 45 PQLTIDR-SLLVDPKL--LFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRG----STS 95
P+L +R SL + K+ + +G+G+ GKV+ E + ++ AIK L +
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 60
Query: 96 DERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNK 155
E ++E R + + H F + V E L G L ++ S +K
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTH----MFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HK 114
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-XX 214
DL A +A +I + LH+ GI++RDLK DN+LL D +K+ADFG+ +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDA 173
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
++APE+ G+K YN+ VD +SFG++L+E+L + PF G
Sbjct: 174 KTNXFCGTPDYIAPEIL------LGQK--YNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G G G V++G + G+ I V IKV+ S + + + + H +
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML----AIGSLDHAH 76
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+V+ LG C + +VT+ LP SL ++ R L + LN+ + IA+ M L +G
Sbjct: 77 IVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 180 IIHRDLKPDNLLL-TPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMAPELYSTVT 235
++HR+L N+LL +P Q +++ADFG+A +WMA E +
Sbjct: 136 MVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE-----S 188
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ G+ Y ++ DV+S+G+ +WEL+T P+ G+
Sbjct: 189 IHFGK---YTHQSDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G G G V++G + G+ I V IKV+ S + + + + H +
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML----AIGSLDHAH 94
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
+V+ LG C + +VT+ LP SL ++ R L + LN+ + IA+ M L +G
Sbjct: 95 IVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 180 IIHRDLKPDNLLL-TPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMAPELYSTVT 235
++HR+L N+LL +P Q +++ADFG+A +WMA E +
Sbjct: 154 MVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE-----S 206
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+ G+ Y ++ DV+S+G+ +WEL+T P+ G+
Sbjct: 207 IHFGK---YTHQSDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 53 LLVDPKLLFIGSKIGEGAHGKVYEGRY----GDRI-VAIKVLNRG--STSDERALLEGRF 105
+L+ + +G +G+G G V E + G + VA+K+L ++SD F
Sbjct: 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-----EF 72
Query: 106 IREVNMMSRVKHDNLVKFLGAC-------KDPLMVIVTELLPGMSLRKYLVSLR----PN 154
+RE M H ++ K +G + P+ +++ + L +L++ R P
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 155 KLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-- 212
L L + F +DIA M+ L + IHRDL N +L D ++ +ADFGL+R
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-TVCVADFGLSRKIYSGD 191
Query: 213 -XXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W+A L Y DV++FG+ +WE++T + P+ G+
Sbjct: 192 YYRQGCASKLPVKWLA--------LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 271 SNLQ 274
N +
Sbjct: 244 ENAE 247
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL- 124
IG G +G VY+G +R VA+KV S ++ + + + I V +M +HDN+ +F+
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVF---SFANRQNFINEKNIYRVPLM---EHDNIARFIV 74
Query: 125 ---GACKDPLM--VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN- 178
D M ++V E P SL KYL SL + D + A + R + LH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTS--DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---------RXXXXXXXXXXXXX 221
I HRDL N+L+ D + ++DFGL+ R
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 222 XYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL---TNRLPFEGMSNLQAAY 277
R+MAPE L V LR E +VD+Y+ G++ WE+ T+ P E + Q A+
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESAL--KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 25/233 (10%)
Query: 46 QLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGSTSDERALLEG 103
+ TID +V P +G+G G VY R I+A+KVL + E+ +E
Sbjct: 10 KFTIDDFDIVRP--------LGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEH 59
Query: 104 RFIREVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
+ RE+ + S ++H N+++ D + ++ E P L K L + + D +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSA 117
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 222
F ++A A+ H +IHRD+KP+NLL+ + LK+ADFG +
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGT 175
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
++ PE+ E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 176 LDYLPPEMI--------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRG----STSDERALLEGRFIREVNMMSRVKHDN 119
+G+G+ GKV+ E + ++ AIK L + E ++E R + + H
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH-- 83
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
F + V E L G L ++ S +K DL A +A +I + LH+ G
Sbjct: 84 --MFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX-XXXXXXXXXXYRWMAPELYSTVTLRQ 238
I++RDLK DN+LL D +K+ADFG+ + ++APE+
Sbjct: 140 IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL------ 192
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
G+K YN+ VD +SFG++L+E+L + PF G
Sbjct: 193 GQK--YNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
++ + I IG G G+V GR G R VAIK L G T +R F+ E
Sbjct: 19 IEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRR----DFLGEA 74
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 168
++M + H N++ G K ++IVTE + SL +L + + + I
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK-NDGQFTVIQLVGMLRGI 133
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX----XXYR 224
+ M L G +HRDL N+L+ + K++DFGL+R R
Sbjct: 134 SAGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
W APE + R+ + + DV+S+GIV+WE+++ P+ M+N
Sbjct: 193 WTAPE---AIAFRK-----FTSASDVWSYGIVMWEVVSYGERPYWEMTN 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYG-----DRIVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V GR D VAIK L G T +R F+ E
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRR----DFLCEA 95
Query: 110 NMMSRVKHDNLVKFLGACK--DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 167
++M + H N+V G P+M+++ E + +L +L + + +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVI-EFMENGALDAFLRK-HDGQFTVIQLVGMLRG 153
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX----XY 223
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 224 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ MSN
Sbjct: 213 RWTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGS-TSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG G++G+ + R +I+ K L+ GS T E+ +L + EVN++ +KH N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----VSEVNLLRELKHPNIVR 69
Query: 123 FLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIARAMDCLH- 176
+ D + IV E G L + + LD L + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 177 ----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELY 231
+ ++HRDLKP N+ L Q ++KL DFGLAR +M+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE-- 186
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA 276
Q + YN K D++S G +L+EL PF S + A
Sbjct: 187 ------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGST---SDERALLEGRFIREVNMMSRVKHDNL 120
IG GA G+V R+ ++ A+K+L++ SD E R ++M+ +
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER-----DIMAFANSPWV 137
Query: 121 VKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHAN 178
V+ A +D + +V E +PG L + + P K A + ++ A+D +H+
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW----AKFYTAEVVLALDAIHSM 193
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
G+IHRD+KPDN+LL LKLADFG + +++PE+ +
Sbjct: 194 GLIHRDVKPDNMLLDK-HGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS--- 249
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
QG +Y + D +S G+ L+E+L PF S L Y+ + S+ P
Sbjct: 250 -QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLCFP 301
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKXVNHKNIISL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRK----YLVSLRPNKLDLHVALNFALDIAR------AMD 173
L P +L + YLV + +L + LD R M
Sbjct: 89 LNV-----------FTPQKTLEEFQDVYLV-MELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 174 C----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
C LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ----VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGS-TSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG G++G+ + R +I+ K L+ GS T E+ +L + EVN++ +KH N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----VSEVNLLRELKHPNIVR 69
Query: 123 FLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIARAMDCLH- 176
+ D + IV E G L + + LD L + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 177 ----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELY 231
+ ++HRDLKP N+ L Q ++KL DFGLAR +M+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE-- 186
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA 276
Q + YN K D++S G +L+EL PF S + A
Sbjct: 187 ------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 32/216 (14%)
Query: 66 IGEGAHGKVYEGRYGDRIV----AIKVLNR---GSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ G+V + D+I A+KV+++ +D+ +LL REV ++ ++ H
Sbjct: 34 LGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHP 86
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLH 176
N+ K +D +V E+ G L ++S R +++D A + + H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYXH 143
Query: 177 ANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE-LYST 233
N I+HRDLKP+NLLL K ++++ DFGL+ ++APE L+ T
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT 203
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y+ K DV+S G++L+ LL+ PF G
Sbjct: 204 ----------YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V G G R VAIK L G T +R F+ E
Sbjct: 30 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR----DFLSEA 85
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N++ G K ++I+TE + SL +L R N V +
Sbjct: 86 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLR 142
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---- 222
IA M L +HRDL N+L+ + K++DFGL+R
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 223 --YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ M+N
Sbjct: 202 IPIRWTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 27 GSVEKESRAVVKNGSITAPQLT-IDRSLLVDPKLLFIGSKIGEGAHGKVYEG--RYGDRI 83
G++E +++ AP T IDR + +K+GEG +G+VY+ +
Sbjct: 10 GTLEAQTQGPGSMSVSAAPSATSIDRYRRI--------TKLGEGTYGEVYKAIDTVTNET 61
Query: 84 VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS 143
VAIK R E + G IREV+++ ++H N+++ + +
Sbjct: 62 VAIK---RIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND 118
Query: 144 LRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS----L 199
L+KY+ P+ + + V +F + ++ H+ +HRDLKP NLLL+ S L
Sbjct: 119 LKKYM-DKNPD-VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL 176
Query: 200 KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 259
K+ DFGLAR W P + L +HY+ VD++S + E
Sbjct: 177 KIGDFGLARAFGIPIRQFTHEIITLWYRP---PEILLGS---RHYSTSVDIWSIACIWAE 230
Query: 260 LLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
+L F G S + FK+ E + P
Sbjct: 231 MLMKTPLFPGDSEID----QLFKIFEVLGLP 257
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKXVNHKNIISL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 89 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 126
Query: 124 LGACKDPLMVIVTELLPGMSLRK----YLVSLRPNKLDLHVALNFALDIAR------AMD 173
L P +L + YLV + +L + LD R M
Sbjct: 127 LNV-----------FTPQKTLEEFQDVYLV-MELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 174 C----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
C LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 234 ----VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 55 VDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIKVLNR-----GSTSDERALLE 102
V PK L +I SK +G GA G+V +E R + VAIK++++ GS + L
Sbjct: 9 VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIKIISKRKFAIGSAREADPALN 67
Query: 103 GRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
E+ ++ ++ H ++K IV EL+ G L +V + +L
Sbjct: 68 VE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCK 123
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXX 220
+ + A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ +V YN VD +S G++L+ L+ PF
Sbjct: 184 GTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 55 VDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIKVLNR-----GSTSDERALLE 102
V PK L +I SK +G GA G+V +E R + VAIK++++ GS + L
Sbjct: 2 VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIKIISKRKFAIGSAREADPALN 60
Query: 103 GRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
E+ ++ ++ H ++K IV EL+ G L +V + +L
Sbjct: 61 VE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCK 116
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXX 220
+ + A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ +V YN VD +S G++L+ L+ PF
Sbjct: 177 GTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 55 VDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIKVLNR-----GSTSDERALLE 102
V PK L +I SK +G GA G+V +E R + VAIK++++ GS + L
Sbjct: 3 VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 103 GRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
E+ ++ ++ H ++K IV EL+ G L +V + +L
Sbjct: 62 VE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCK 117
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXX 220
+ + A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ +V YN VD +S G++L+ L+ PF
Sbjct: 178 GTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 55 VDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIKVLNR-----GSTSDERALLE 102
V PK L +I SK +G GA G+V +E R + VAIK++++ GS + L
Sbjct: 3 VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 103 GRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
E+ ++ ++ H ++K IV EL+ G L +V + +L
Sbjct: 62 VE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCK 117
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXX 220
+ + A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ +V YN VD +S G++L+ L+ PF
Sbjct: 178 GTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 55 VDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIKVLNR-----GSTSDERALLE 102
V PK L +I SK +G GA G+V +E R + VAIK++++ GS + L
Sbjct: 3 VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 103 GRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
E+ ++ ++ H ++K IV EL+ G L +V + +L
Sbjct: 62 VE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCK 117
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXX 220
+ + A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 221 XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ +V YN VD +S G++L+ L+ PF
Sbjct: 178 GTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGS-TSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG G++G+ + R +I+ K L+ GS T E+ +L + EVN++ +KH N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----VSEVNLLRELKHPNIVR 69
Query: 123 FLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIARAMDCLH- 176
+ D + IV E G L + + LD L + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 177 ----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELY 231
+ ++HRDLKP N+ L Q ++KL DFGLAR +M+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE-- 186
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA 276
Q + YN K D++S G +L+EL PF S + A
Sbjct: 187 ------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 52 SLLVDPKLLF-IGSKIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIRE 108
SL P+ +F + K+GEG++G VY+ + + +IVAIK + S E I+E
Sbjct: 22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE-------IIKE 74
Query: 109 VNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 167
+++M + ++VK+ G+ K+ + IV E S+ ++ LR L
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQS 133
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWM 226
+ ++ LH IHRD+K N+LL + + KLADFG+A + WM
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWM 192
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
APE+ + YN D++S GI E+ + P+ + ++A +
Sbjct: 193 APEVIQEIG--------YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF 235
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKXVNHKNIISL 88
Query: 124 LGACKDPLMV-------IVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL-DIARAMDCL 175
L + +V EL+ L + +LD H +++ L + + L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELD-HERMSYLLYQMLXGIKHL 142
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 143 HSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VI 197
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
L G Y VD++S G ++ E++ +++ F G
Sbjct: 198 LGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 126
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 127 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 233
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 234 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 89 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 89
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 90 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 196
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 87
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 88 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 136
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 194
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 195 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 62 IGSKIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ S++G GA VY + + A+KVL + T D++ + E+ ++ R+ H N
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRT-----EIGVLLRLSHPN 109
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++K + P + +V EL+ G L +V A + I A+ LH N
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
GI+HRDLKP+NLL PD LK+ADFGL++ + APE+
Sbjct: 168 GIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
Y +VD++S GI+ + LL PF
Sbjct: 227 --------YGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 66 IGEGAHGKVYEGRYGDRI--VAIKVLN--RGSTS-DERALLEGRFIREVNMMSRVKHDNL 120
IG GA V + VAIK +N + TS DE ++E+ MS+ H N+
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-------LLKEIQAMSQCHHPNI 75
Query: 121 VKFLGA--CKDPLMVIVTELLPG---MSLRKYLVSLRPNK---LDLHVALNFALDIARAM 172
V + + KD L +V +LL G + + K++V+ +K LD ++ +
Sbjct: 76 VSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR------WM 226
+ LH NG IHRD+K N+LL D S+++ADFG++ WM
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
APE+ V + Y+ K D++SFGI EL T P+
Sbjct: 194 APEVMEQV-------RGYDFKADIWSFGITAIELATGAAPY 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 89
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 90 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 196
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 89 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGST---SDERALLEGRFIREVNMMSRVKHDNL 120
IG GA G+V R+ ++ A+K+L++ SD E R ++M+ +
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER-----DIMAFANSPWV 136
Query: 121 VKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHAN 178
V+ A +D + +V E +PG L + + P K A + ++ A+D +H+
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSM 192
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
G IHRD+KPDN+LL LKLADFG + +++PE+ +
Sbjct: 193 GFIHRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS--- 248
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
QG +Y + D +S G+ L+E+L PF S L Y+ + S+ P
Sbjct: 249 -QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFP 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGST---SDERALLEGRFIREVNMMSRVKHDNL 120
IG GA G+V R+ ++ A+K+L++ SD E R ++M+ +
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER-----DIMAFANSPWV 136
Query: 121 VKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHAN 178
V+ A +D + +V E +PG L + + P K A + ++ A+D +H+
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSM 192
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
G IHRD+KPDN+LL LKLADFG + +++PE+ +
Sbjct: 193 GFIHRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS--- 248
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
QG +Y + D +S G+ L+E+L PF S L Y+ + S+ P
Sbjct: 249 -QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFP 300
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGST---SDERALLEGRFIREVNMMSRVKHDNL 120
IG GA G+V R+ ++ A+K+L++ SD E R ++M+ +
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER-----DIMAFANSPWV 131
Query: 121 VKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHAN 178
V+ A +D + +V E +PG L + + P K A + ++ A+D +H+
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSM 187
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
G IHRD+KPDN+LL LKLADFG + +++PE+ +
Sbjct: 188 GFIHRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS--- 243
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
QG +Y + D +S G+ L+E+L PF S L Y+ + S+ P
Sbjct: 244 -QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFP 295
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 88
Query: 124 LGACKDPLMV-------IVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL-DIARAMDCL 175
L + +V EL+ L + +LD H +++ L + + L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELD-HERMSYLLYQMLXGIKHL 142
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 143 HSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VI 197
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
L G Y VD++S G ++ E++ +++ F G
Sbjct: 198 LGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 82
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 83 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 190 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 81
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 82 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 188
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 189 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 66 IGEGAHGKVYEGRYGDRI--VAIKVLN--RGSTS-DERALLEGRFIREVNMMSRVKHDNL 120
IG GA V + VAIK +N + TS DE ++E+ MS+ H N+
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-------LLKEIQAMSQCHHPNI 70
Query: 121 VKFLGA--CKDPLMVIVTELLPG---MSLRKYLVSLRPNK---LDLHVALNFALDIARAM 172
V + + KD L +V +LL G + + K++V+ +K LD ++ +
Sbjct: 71 VSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR------WM 226
+ LH NG IHRD+K N+LL D S+++ADFG++ WM
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
APE+ V + Y+ K D++SFGI EL T P+
Sbjct: 189 APEVMEQV-------RGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 82
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMDC 174
L P +L ++ V L +D ++ + LD R M C
Sbjct: 83 LNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 190 ---VILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V DR VAIK L+R + A R RE+ +M V H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIISL 81
Query: 124 LGACKDPLMV-------IVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL-DIARAMDCL 175
L + +V EL+ L + +LD H +++ L + + L
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELD-HERMSYLLYQMLXGIKHL 135
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 136 HSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VI 190
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
L G Y VD++S G ++ E++ +++ F G
Sbjct: 191 LGMG----YKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 62 IGSKIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I IG GA+G V R G ++ K+ N R +RE+ ++ KHD
Sbjct: 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN----AKRTLRELKILKHFKHD 113
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN------------FAL 166
N++ A KD I+ +P + V L + DLH ++ F
Sbjct: 114 NII----AIKD----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 165
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR----XXXXXXXXXXXXXX 222
+ R + +H+ +IHRDLKP NLL+ + LK+ DFG+AR
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 223 YRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
RW APEL ++ Y +D++S G + E+L R F G
Sbjct: 225 TRWYRAPELMLSL-------HEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 65 KIGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH-DNLV 121
+IG GA+G V + + +I+A+K + ST DE+ + + + +++++ R +V
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKE--QKQLLMDLDVVMRSSDCPYIV 84
Query: 122 KFLGAC-KDPLMVIVTELLPGM--SLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+F GA ++ I EL+ KY+ S+ + + + L +A++ L N
Sbjct: 85 QFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 179 -GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
IIHRD+KP N+LL ++KL DFG++ +MAPE R
Sbjct: 145 LKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
QG Y+ + DV+S GI L+EL T R P+
Sbjct: 204 QG----YDVRSDVWSLGITLYELATGRFPY 229
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 66 IGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG+GA V R + A+K+++ + L RE ++ +KH ++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 124 LGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH---VALNFALDIARAMDCLHANG 179
L D ++ +V E + G L +V R + ++ VA ++ I A+ H N
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 180 IIHRDLKPDNLLLTPDQKS--LKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
IIHRD+KP+N+LL + S +KL DFG+A + +MAPE+
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV----- 205
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+++ Y VDV+ G++L+ LL+ LPF G
Sbjct: 206 ---KREPYGKPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKVVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR---------- 170
L P SL ++ + + +L + LD R
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
+ LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G+++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 62 IGSKIGEGAHGKVYEGR---YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I IG GA+G V R G ++ K+ N R +RE+ ++ KHD
Sbjct: 59 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN----AKRTLRELKILKHFKHD 114
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN------------FAL 166
N++ A KD I+ +P + V L + DLH ++ F
Sbjct: 115 NII----AIKD----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 166
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR----XXXXXXXXXXXXXX 222
+ R + +H+ +IHRDLKP NLL+ + LK+ DFG+AR
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 223 YRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
RW APEL ++ Y +D++S G + E+L R F G
Sbjct: 226 TRWYRAPELMLSL-------HEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 66 IGEGAHGKVYEGRYGD-RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
+G G GKVY+GR D +VA+K L T E +F EV M+S H NL++
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG----ELQFQTEVEMISMAVHRNLLRLR 93
Query: 125 GACKDPL-MVIVTELLPGMSLRKYLVSLRPNK---LDLHVALNFALDIARAMDCLHAN-- 178
G C P ++V + S+ L RP LD AL AR + LH +
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 179 -GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPELYSTVT 235
IIHRD+K N+LL + +++ + DFGLA+ +APE ST
Sbjct: 153 PKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLST-- 209
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ K DV+ +G++L EL+T + F+
Sbjct: 210 ------GKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 93
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 94 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 142
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 200
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 201 ---VILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 25/247 (10%)
Query: 35 AVVKNGSITAPQLTIDRSLLVDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIK 87
++ +N LT+D V PK L +I SK +G GA G+V +E R + VAI+
Sbjct: 123 SLSRNKVFVFFDLTVDDQS-VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIR 180
Query: 88 VLNR-----GSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGM 142
++++ GS + L E+ ++ ++ H ++K IV EL+ G
Sbjct: 181 IISKRKFAIGSAREADPALNVE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG 238
Query: 143 SLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LK 200
L +V + +L + + A+ LH NGIIHRDLKP+N+LL+ ++ +K
Sbjct: 239 ELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 296
Query: 201 LADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
+ DFG ++ ++APE+ +V YN VD +S G++L+
Sbjct: 297 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFIC 351
Query: 261 LTNRLPF 267
L+ PF
Sbjct: 352 LSGYPPF 358
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 25/247 (10%)
Query: 35 AVVKNGSITAPQLTIDRSLLVDPKLL---FIGSK-IGEGAHGKV---YEGRYGDRIVAIK 87
++ +N LT+D V PK L +I SK +G GA G+V +E R + VAI+
Sbjct: 109 SLSRNKVFVFFDLTVDDQS-VYPKALRDEYIMSKTLGSGACGEVKLAFE-RKTCKKVAIR 166
Query: 88 VLNR-----GSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGM 142
++++ GS + L E+ ++ ++ H ++K IV EL+ G
Sbjct: 167 IISKRKFAIGSAREADPALNVE--TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG 224
Query: 143 SLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LK 200
L +V + +L + + A+ LH NGIIHRDLKP+N+LL+ ++ +K
Sbjct: 225 ELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 282
Query: 201 LADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
+ DFG ++ ++APE+ +V YN VD +S G++L+
Sbjct: 283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG-----TAGYNRAVDCWSLGVILFIC 337
Query: 261 LTNRLPF 267
L+ PF
Sbjct: 338 LSGYPPF 344
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 66 IGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK-HDNLVK 122
+GEGAH +V + A+K++ + + + R REV M+ + + H N+++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK-----QPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 123 FLGACKDP-LMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAMDCLHANGI 180
+ ++ +V E + G S+ ++ R N+L+ V + D+A A+D LH GI
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 181 IHRDLKPDNLLLT-PDQKS-LKLADFGLAR--------XXXXXXXXXXXXXXYRWMAPEL 230
HRDLKP+N+L P+Q S +K+ DFGL +MAPE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ E Y+ + D++S G++L+ LL+ PF G
Sbjct: 193 VEAFS---EEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ---VILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 82
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 83 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 189
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
V L G Y VD++S G ++ E++ +++ F G
Sbjct: 190 ---VILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKVVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR---------- 170
L P SL ++ + + +L + LD R
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
+ LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G+++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKVVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 31/233 (13%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRY---GDR--IVAIKVLNRGSTSDERALLEGRFIREV 109
+D + I IG G G+V G G R VAIK L G T +R F+ E
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR----DFLSEA 59
Query: 110 NMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFAL 166
++M + H N++ G K ++I+TE + SL +L R N V +
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLR 116
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---- 222
IA M L +HR L N+L+ + K++DFGL+R
Sbjct: 117 GIAAGMKYLADMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 223 --YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSN 272
RW APE + + + + DV+S+GIV+WE+++ P+ M+N
Sbjct: 176 IPIRWTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 62 IGSKIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ S +GEGA+G V + IVAIK + ++ L R +RE+ ++ KH+N
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKILKHFKHEN 70
Query: 120 LVKFLGACK-DPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
++ + D + I+ EL+ L + + + + D H+ F RA+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS--DDHIQY-FIYQTLRAVK 126
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
LH + +IHRDLKP NLL+ LK+ DFGLAR + E +T
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 234 VTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
R E Y+ +DV+S G +L EL R F G
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 62 IGSKIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ S +GEGA+G V + IVAIK + ++ L R +RE+ ++ KH+N
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKILKHFKHEN 70
Query: 120 LVKFLGACK-DPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
++ + D + I+ EL+ L + + + + D H+ F RA+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS--DDHIQY-FIYQTLRAVK 126
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
LH + +IHRDLKP NLL+ LK+ DFGLAR + E +T
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 234 VTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
R E Y+ +DV+S G +L EL R F G
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 45 PQLTIDRSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL 100
P+ + + +D KLL + K +G G G V +G Y + + +D
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PA 413
Query: 101 LEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
L+ + E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 472
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ ++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 473 -IELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQ 530
Query: 221 XX----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 531 THGKWPVKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 62 IGSKIGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+ S +GEGA+G V + IVAIK + ++ L R +RE+ ++ KH+N
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKILKHFKHEN 70
Query: 120 LVKFLGACK-DPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 173
++ + D + I+ EL+ L + + + + D H+ F RA+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS--DDHIQY-FIYQTLRAVK 126
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 233
LH + +IHRDLKP NLL+ LK+ DFGLAR + E +T
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 234 VTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
R E Y+ +DV+S G +L EL R F G
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 45 PQLTIDRSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL 100
P+ + + +D KLL + K +G G G V +G Y + + +D
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PA 412
Query: 101 LEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
L+ + E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 471
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ ++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 472 -IELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQ 529
Query: 221 XX----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 530 THGKWPVKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 90
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 91 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 139
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPE- 197
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 198 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 45 PQLTIDRSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL 100
P+ + + +D KLL + K +G G G V +G Y + + +D
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PA 68
Query: 101 LEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
L+ + E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 127
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ ++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 128 -IELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQ 185
Query: 221 XX----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 186 THGKWPVKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 89
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 90 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 196
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 23/237 (9%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I KIG G +VY VA+K + D +A I+E++++ ++ H N
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA--RADCIKEIDLLKQLNHPN 93
Query: 120 LVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIARAMDCLH 176
++K+ + +D + IV EL L + + + K + + + + A++ +H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
+ ++HRD+KP N+ +T +KL D GL R A L T
Sbjct: 154 SRRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTA----------AHSLVGTPYY 202
Query: 237 RQGEKKH---YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
E+ H YN K D++S G +L+E+ + PF G + Y+ K+++ Y P
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPP 257
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKCVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR------AMDC 174
L P SL ++ + + +L + LD R M C
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 175 ----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 45 PQLTIDRSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL 100
P+ + + +D KLL + K +G G G V +G Y + + +D
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PA 70
Query: 101 LEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
L+ + E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 129
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ ++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 130 -IELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQ 187
Query: 221 XX----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 188 THGKWPVKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 45 PQLTIDRSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERAL 100
P+ + + +D KLL + K +G G G V +G Y + + +D
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PA 70
Query: 101 LEGRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
L+ + E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 129
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
+ ++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 130 -IELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQ 187
Query: 221 XX----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 188 THGKWPVKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 36 VVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDR--IVAIKVLNRGS 93
V++N S T LT R +D IG +G+G G VY R IVA+KVL +
Sbjct: 5 VMENSSGTPDILT--RHFTIDD--FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ 60
Query: 94 TSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLR 152
E+ +E + RE+ + + + H N+++ D + ++ E P L K L +
Sbjct: 61 I--EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ--K 116
Query: 153 PNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX 212
D ++A A+ H +IHRD+KP+NLLL + LK+ADFG +
Sbjct: 117 SCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLG-LKGELKIADFGWS-VHAP 174
Query: 213 XXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
++ PE+ E + +N KVD++ G++ +ELL PFE S+
Sbjct: 175 SLRRKTMCGTLDYLPPEMI--------EGRMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 38/223 (17%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G V +R VAIK L+R + A R RE+ +M V H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA---KRAYRELVLMKVVNHKNIIGL 88
Query: 124 LGACKDPLMVIVTELLPGMSLRKY---LVSLRPNKLDLHVALNFALDIAR---------- 170
L P SL ++ + + +L + LD R
Sbjct: 89 LNV-----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
+ LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEIXINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEIXINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 22/229 (9%)
Query: 51 RSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFI 106
+ + +D KLL + K +G G G V +G Y + + +D L+ +
Sbjct: 9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELL 66
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVH 124
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---- 222
++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 184 VKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINAMLNHENVVKF 70
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 22/229 (9%)
Query: 51 RSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFI 106
+ + +D KLL + K +G G G V +G Y + + +D L+ +
Sbjct: 3 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELL 60
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVH 118
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---- 222
++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 178 VKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 66 IGEGAHGKVYEGRYGD-RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
+G G GKVY+GR D +VA+K L E +F EV M+S H NL++
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG----ELQFQTEVEMISMAVHRNLLRLR 101
Query: 125 GACKDPLMVIVTELLPGMS-------LRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
G C P ++ + P M+ LR+ S P LD AL AR + LH
Sbjct: 102 GFCMTPTERLL--VYPYMANGSVASCLRERPESQPP--LDWPKRQRIALGSARGLAYLHD 157
Query: 178 N---GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPELYS 232
+ IIHRD+K N+LL + +++ + DFGLA+ +APE S
Sbjct: 158 HCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
T + K DV+ +G++L EL+T + F+
Sbjct: 217 T--------GKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 22/229 (9%)
Query: 51 RSLLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFI 106
+ + +D KLL + K +G G G V +G Y + + +D L+ +
Sbjct: 3 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELL 60
Query: 107 REVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 166
E N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVH 118
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---- 222
++ M L + +HRDL N+LL Q K++DFGL++
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 178 VKWYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 66 IGEGAHGKVYEGRYG---DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD---- 118
+GEGA+ KV +G + A+K++ + + R REV + + + +
Sbjct: 21 LGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSR-----SRVFREVETLYQCQGNKNIL 74
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
L++F D +V E L G S+ ++ + + A D+A A+D LH
Sbjct: 75 ELIEFFE--DDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 179 GIIHRDLKPDNLLL-TPDQKS-LKLADFGLAR--------XXXXXXXXXXXXXXYRWMAP 228
GI HRDLKP+N+L +P++ S +K+ DF L +MAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
E+ T + Y+ + D++S G+VL+ +L+ PF G +
Sbjct: 191 EVVEVFT---DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEIXINKMLNHENVVKF 70
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 65 KIGEGAHGKVYEGR-YG------DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GE GKVY+G +G + VAIK L + L F E + +R++H
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP----LREEFRHEAMLRARLQH 88
Query: 118 DNLVKFLGA-CKD-PLMVIVTELLPGMSLRKYLVSLRPNK--------------LDLHVA 161
N+V LG KD PL +I + G L ++LV P+ L+
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHG-DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 162 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX--- 218
++ IA M+ L ++ ++H+DL N+L+ D+ ++K++D GL R
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-DKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 219 XXXXYRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
RWMAPE +Y ++ D++S+G+VLWE+ + L P+ G SN
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDS----------DIWSYGVVLWEVFSYGLQPYCGYSN 253
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 68
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 69 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 126 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 178
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 65 KIGEGAHGKVYEGR-YG------DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
++GE GKVY+G +G + VAIK L + L F E + +R++H
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP----LREEFRHEAMLRARLQH 71
Query: 118 DNLVKFLGA-CKD-PLMVIVTELLPGMSLRKYLVSLRPNK--------------LDLHVA 161
N+V LG KD PL +I + G L ++LV P+ L+
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHG-DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 162 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX--- 218
++ IA M+ L ++ ++H+DL N+L+ D+ ++K++D GL R
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-DKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 219 XXXXYRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSN 272
RWMAPE +Y ++ D++S+G+VLWE+ + L P+ G SN
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDS----------DIWSYGVVLWEVFSYGLQPYCGYSN 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 62 IGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G+ +G+G+ VY E + VAIK++++ + +A + R EV + ++KH +
Sbjct: 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--KAGMVQRVQNEVKIHCQLKHPS 72
Query: 120 LVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+++ +D V +V E+ + +YL + R + A +F I M LH++
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
GI+HRDL NLLLT + ++K+ADFGLA + +++PE+
Sbjct: 132 GILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI------- 183
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + + DV+S G + + LL R PF+
Sbjct: 184 -ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 55 VDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
+D K L +K+ E G++++GR+ + +KVL S ++ F E +
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS---RDFNEECPRLRI 63
Query: 115 VKHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 171
H N++ LGAC+ P ++T P SL L +D A+ FALD AR
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARG 123
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
LH L P + L + +S+ + + AR R AP
Sbjct: 124 XAFLHT----LEPLIPRHAL---NSRSVXIDEDXTARISXADVKFSFQSPG-RXYAPAWV 175
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 282
+ L++ + D +SF ++LWEL+T +PF +SN + A +
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALE 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 48/228 (21%)
Query: 66 IGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G G G V+E + D AIK + + R L + +REV +++++H +V++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRY 68
Query: 124 LGACKDPLMVIVTELLPGMSLRKYL-----VSLRPNKLDL------------HVALNFAL 166
A L TE L S + YL + + N D V L+ L
Sbjct: 69 FNAW---LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 167 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR-- 224
IA A++ LH+ G++HRDLKP N+ T D +K+ DFGL
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 225 -----------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
+M+PE Q Y++KVD++S G++L+ELL
Sbjct: 185 ARHTGQVGTKLYMSPE--------QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 53 LLVDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIRE 108
+ +D KLL + K +G G G V +G Y + + +D L+ + E
Sbjct: 1 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAE 58
Query: 109 VNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 168
N+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + +
Sbjct: 59 ANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQV 116
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YR 224
+ M L + +HRDL N+LL Q K++DFGL++ +
Sbjct: 117 SMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 225 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
W APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 176 WYAPECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 66 IGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK-HDNLVK 122
+GEGAH +V + A+K++ + + + R REV M+ + + H N+++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK-----QPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 123 FLGACKD-PLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAMDCLHANGI 180
+ ++ +V E + G S+ ++ R N+L+ V + D+A A+D LH GI
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 181 IHRDLKPDNLLLT-PDQKS-LKLADFGLAR--------XXXXXXXXXXXXXXYRWMAPEL 230
HRDLKP+N+L P+Q S +K+ DF L +MAPE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ E Y+ + D++S G++L+ LL+ PF G
Sbjct: 193 VEAFS---EEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA+G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 70
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 55 VDPKLLFIGSK-IGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
+D KLL + K +G G G V +G Y + + +D L+ + E N
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEAN 58
Query: 111 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 59 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 116
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 226
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 117 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
APE + +++K DV+SFG+++WE + + P+ GM
Sbjct: 176 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K + D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA +V+ + R ++ A+K + + A + E+ ++ ++KH+N+V
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP-----AFRDSSLENEIAVLKKIKHENIVTL 71
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ +V +L+ G L ++ R + +L + A+ LH NGI+H
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQ-QVLSAVKYLHENGIVH 129
Query: 183 RDLKPDNLL-LTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLKP+NLL LTP++ S + + DFGL++ ++APE+ +
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP-GYVAPEVLA-------- 180
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPF 267
+K Y+ VD +S G++ + LL PF
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 45/274 (16%)
Query: 15 EGEQEQNQHVLRGSVEKESRAVVKNGSITAPQL----TIDRSLLVDPKLLFIGSKIGEGA 70
EG +E Q R + + ++A + + T + DR L D L + +G+G+
Sbjct: 297 EGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMV---LGKGS 353
Query: 71 HGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACK 128
GKV E + D + A+K+L + I++ ++ + ++ G K
Sbjct: 354 FGKVMLSERKGTDELYAVKILKKDVV-----------IQDDDVECTMVEKRVLALPG--K 400
Query: 129 DPLMVIVTELLPGMSLRKYLVSLRPNKLDL--HV----------ALNFALDIARAMDCLH 176
P + + M R Y V N DL H+ A+ +A +IA + L
Sbjct: 401 PPFLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 177 ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVT 235
+ GII+RDLK DN++L + +K+ADFG+ + ++APE+ +
Sbjct: 460 SKGIIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY-- 516
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y VD ++FG++L+E+L + PFEG
Sbjct: 517 ------QPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I ++G GA G +V E G+ A V+ + E +E+ MS ++H
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR------KEIQTMSVLRHP 214
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
LV A +D MV++ E + G L + V+ NK+ A+ + + + + +H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 178 NGIIHRDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
N +H DLKP+N++ T + + LKL DFGL + APE+
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV------ 327
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
E K D++S G++ + LL+ PF G ++
Sbjct: 328 --AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+GEGA G+V R + VA+K+++ D +E+ + + H+N+VKF
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD----CPENIKKEICINKMLNHENVVKF 69
Query: 124 LGACKD-PLMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDCLHANGII 181
G ++ + + E G L + P+ + A F + + LH GI
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 179
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 278
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 108 EVNMMSRV-KHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 165
E+ ++ R +H N++ D V +VTEL+ G L + LR A
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI--LRQKFFSEREASAVL 122
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXX-XXXXXXX 221
I + ++ LHA G++HRDLKP N+L + +S+++ DFG A+
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE V RQG Y+ D++S G++L+ +LT PF
Sbjct: 183 TANFVAPE----VLERQG----YDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
I ++G GA G +V E G+ A V+ + E +E+ MS ++H
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR------KEIQTMSVLRHP 108
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
LV A +D MV++ E + G L + V+ NK+ A+ + + + + +H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 178 NGIIHRDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTL 236
N +H DLKP+N++ T + + LKL DFGL + APE+
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV------ 221
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
E K D++S G++ + LL+ PF G ++
Sbjct: 222 --AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG GA G V ++ G VA+K L+R + A R RE+ ++ V H N++
Sbjct: 30 IGSGAQGIVCAAFDTVLGIN-VAVKKLSRPFQNQTHA---KRAYRELVLLKCVNHKNIIS 85
Query: 123 FLGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMD 173
L P +L ++ V L +D ++ ++ LD R M
Sbjct: 86 LLNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 134
Query: 174 C----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
C LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPE 193
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ EL+ + F+G ++
Sbjct: 194 ----VILGMG----YKENVDIWSVGCIMGELVKGSVIFQGTDHI 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 58 KLLFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV 115
K+ +G GA +V E + ++ A+K + + + + + +E E+ ++ ++
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN----EIAVLRKI 77
Query: 116 KHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMD 173
KH+N+V + P + +V +L+ G L +V + D + LD A+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVY 134
Query: 174 CLHANGIIHRDLKPDNLL-LTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 231
LH GI+HRDLKP+NLL + D++S + ++DFGL++ ++APE+
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K Y+ VD +S G++ + LL PF
Sbjct: 195 A--------QKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 57 PKLLFIGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P+ G +GEG+ V R R AIK+L + E + RE ++MSR
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSR 64
Query: 115 VKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDI 168
+ H VK +D +L G+S L KY+ + D + +I
Sbjct: 65 LDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 117
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RW 225
A++ LH GIIHRDLKP+N+LL D +++ DFG A+ ++
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++PEL + +K D+++ G ++++L+ PF
Sbjct: 177 VSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 57 PKLLFIGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P+ G +GEG+ V R R AIK+L + E + RE ++MSR
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSR 65
Query: 115 VKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDI 168
+ H VK +D +L G+S L KY+ + D + +I
Sbjct: 66 LDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 118
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RW 225
A++ LH GIIHRDLKP+N+LL D +++ DFG A+ ++
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++PEL + +K D+++ G ++++L+ PF
Sbjct: 178 VSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 57 PKLLFIGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P+ G +GEG+ V R R AIK+L + E + RE ++MSR
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSR 63
Query: 115 VKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDI 168
+ H VK +D +L G+S L KY+ + D + +I
Sbjct: 64 LDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 116
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RW 225
A++ LH GIIHRDLKP+N+LL D +++ DFG A+ ++
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++PEL + +K D+++ G ++++L+ PF
Sbjct: 176 VSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 57 PKLLFIGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P+ G +GEG+ V R R AIK+L + E + RE ++MSR
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSR 66
Query: 115 VKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDI 168
+ H VK +D +L G+S L KY+ + D + +I
Sbjct: 67 LDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 119
Query: 169 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRW 225
A++ LH GIIHRDLKP+N+LL D +++ DFG A+ ++
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++PEL + +K D+++ G ++++L+ PF
Sbjct: 179 VSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 91
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 92 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 144
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 204 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 94
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 95 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 147
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 207 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 64 SKIGEGAHGKVYEGRYGD--RIVAIK-VLNRGSTSDERALLEGRFIREVNMMSRV-KHDN 119
S++G G++G+V++ R + R+ A+K ++ +RA R + EV +V +H
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRA----RKLAEVGSHEKVGQHPC 118
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
V+ A ++ ++ + L G SL+++ + + + V + D A+ LH+ G
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLALAHLHSQG 177
Query: 180 IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
++H D+KP N+ L P + KL DFGL R+MAPEL
Sbjct: 178 LVHLDVKPANIFLGPRGRC-KLGDFGLLVELGTAGAGEVQEGDPRYMAPELL-------- 228
Query: 240 EKKHYNNKVDVYSFGIVLWELLTN-RLPF--EGMSNLQAAY 277
+ Y DV+S G+ + E+ N LP EG L+ Y
Sbjct: 229 -QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 90
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 91 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 143
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 203 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 98
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 99 FVKLYFCFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 151
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 152 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 211 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 91
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 92 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 144
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 204 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 96
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 97 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 149
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 150 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 209 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 90
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 91 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 143
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 203 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 42 ITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALL 101
+TA Q ++ V + G + G+ H K E G ++ A + RG E
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQ-VH-KCEETATGLKLAAKIIKTRGMKDKEEVK- 134
Query: 102 EGRFIREVNMMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHV 160
E+++M+++ H NL++ A + +V+V E + G L ++ N +L
Sbjct: 135 -----NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLL-LTPDQKSLKLADFGLARXXXXXXXXXXX 219
L F I + +H I+H DLKP+N+L + D K +K+ DFGLAR
Sbjct: 190 IL-FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248
Query: 220 XXXYRWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
++APE+ Y V+ D++S G++ + LL+ PF G
Sbjct: 249 FGTPEFLAPEVVNYDFVSF----------PTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 91
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 92 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 144
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 204 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 75
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 76 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 128
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 129 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 188 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 94
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 95 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 147
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 207 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ V R R AIK+L + E + RE ++MSR+ H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 93
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 94 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 146
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 206 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 24/240 (10%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG---MSNLQAAYAAAFKVQESIYA 289
+ L + D++S G++ + LL+ PF G L A ++ E ++
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 66 IGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G G ++ + + +VA+K + RG DE RE+ ++H N+V+F
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 80
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
P + IV E G L + + + + A F + + HA + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 183 RDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLK +N LL +P + LK+ADFG ++ ++APE+
Sbjct: 139 RDLKLENTLLDGSPAPR-LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL-------- 189
Query: 241 KKHYNNKV-DVYSFGIVLWELLTNRLPFE 268
KK Y+ KV DV+S G+ L+ +L PFE
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G KV + +VAIK++++ + + R E+ + ++H ++ +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP----RIKTEIEALKNLRHQHICQL 73
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDIARAMDCLHANGII 181
+ + +V E PG L Y++S R ++ + V I A+ +H+ G
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAYVHSQGYA 130
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXX--XXXXXXXXXXXYRWMAPELYSTVTLRQG 239
HRDLKP+NLL K LKL DFGL + APEL QG
Sbjct: 131 HRDLKPENLLFDEYHK-LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI------QG 183
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 277
K + ++ DV+S GI+L+ L+ LPF+ N+ A Y
Sbjct: 184 -KSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALY 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 66 IGEGAHGKV---YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG GA G V ++ G VA+K L+R + A R RE+ ++ V H N++
Sbjct: 32 IGSGAQGIVCAAFDTVLGIN-VAVKKLSRPFQNQTHA---KRAYRELVLLKCVNHKNIIS 87
Query: 123 FLGACKDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVA--LNFALDIAR------AMD 173
L P +L ++ V L +D ++ ++ LD R M
Sbjct: 88 LLNV-----------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 136
Query: 174 C----LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
C LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPE 195
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
V L G Y VD++S G ++ EL+ + F+G ++
Sbjct: 196 ----VILGMG----YAANVDIWSVGCIMGELVKGCVIFQGTDHI 231
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 107 REVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNF 164
RE + +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHC 133
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I ++ H+NGI+HR+LKP+NLLL K ++KLADFGLA
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 193
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+++PE+ +K Y+ VD+++ G++L+ LL PF
Sbjct: 194 PGYLSPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 66 IGEGAHGKVYEGRYGDRIV--AIKVLNRGSTSDERALLEGRFIREVN-MMSRVKHDNLV- 121
IG+G+ GKV R+ V A+KVL + + ++ E + E N ++ VKH LV
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE--EKHIMSERNVLLKNVKHPFLVG 103
Query: 122 -KFLGACKDPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
F D L ++ + G L++ L P A +A +IA A+ LH+
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR------ARFYAAEIASALGYLHS 157
Query: 178 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX-XYRWMAPELYSTVTL 236
I++RDLKP+N+LL Q + L DFGL + ++APE+
Sbjct: 158 LNIVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL----- 211
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
K+ Y+ VD + G VL+E+L PF
Sbjct: 212 ---HKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 66 IGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G G ++ + + +VA+K + RG DE RE+ ++H N+V+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 79
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
P + IV E G L + + + + A F + + HA + H
Sbjct: 80 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 183 RDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLK +N LL +P + LK+ DFG ++ ++APE+
Sbjct: 138 RDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-------- 188
Query: 241 KKHYNNKV-DVYSFGIVLWELLTNRLPFE 268
KK Y+ KV DV+S G+ L+ +L PFE
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 61 FIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALL-------EGRFIREVNMMS 113
+G +GEG++GKV E ++ + L R + + E +E+ ++
Sbjct: 8 LMGDLLGEGSYGKVKE------VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 114 RVKHDNLVKFLGAC----KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
R++H N+++ + K + +++ + GM ++ L S+ + + A + +
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 229
++ LH+ GI+H+D+KP NLLLT +LK++ G+A
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTS---QGSP 175
Query: 230 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ + G KVD++S G+ L+ + T PFEG
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 108 EVNMMSRV-KHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 165
E+ ++ R +H N++ D V +VTEL G L + LR A
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI--LRQKFFSEREASAVL 122
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXX-XXXXXXX 221
I + ++ LHA G++HRDLKP N+L + +S+++ DFG A+
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE V RQG Y+ D++S G++L+ LT PF
Sbjct: 183 TANFVAPE----VLERQG----YDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G +GEG+ R R AIK+L + E + RE ++MSR+ H
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLDHPF 91
Query: 120 LVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNFALDIARAMD 173
VK +D +L G+S L KY+ + D + +I A++
Sbjct: 92 FVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALE 144
Query: 174 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPEL 230
LH GIIHRDLKP+N+LL D +++ DFG A+ ++++PEL
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 231 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +K D+++ G ++++L+ PF
Sbjct: 204 LT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 24/240 (10%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG---MSNLQAAYAAAFKVQESIYA 289
+ L + D++S G++ + LL+ PF G L A ++ E ++
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 107 REVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNF 164
RE + +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHC 110
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I ++ H+NGI+HR+LKP+NLLL K ++KLADFGLA
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+++PE+ +K Y+ VD+++ G++L+ LL PF
Sbjct: 171 PGYLSPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 24/240 (10%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG---MSNLQAAYAAAFKVQESIYA 289
+ L + D++S G++ + LL+ PF G L A ++ E ++
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 107 REVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNF 164
RE + +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHC 110
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I ++ H+NGI+HR+LKP+NLLL K ++KLADFGLA
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+++PE+ +K Y+ VD+++ G++L+ LL PF
Sbjct: 171 PGYLSPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 107 REVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNF 164
RE + +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHC 109
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I ++ H+NGI+HR+LKP+NLLL K ++KLADFGLA
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 169
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+++PE+ +K Y+ VD+++ G++L+ LL PF
Sbjct: 170 PGYLSPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++I+ E + G L + A DI A+ LH++ I HRD+KP+NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T +K LKL DFG A+ Y ++APE+ G +K Y+ D
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVL-------GPEK-YDKSCD 211
Query: 250 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 282
++S G++++ LL PF SN A + K
Sbjct: 212 MWSLGVIMYILLCGFPPF--YSNTGQAISPGMK 242
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 107 REVNMMSRV-KHDNLVKFLGACKDPLMV-IVTELLPGMSL-----RKYLVSLRPNKLDLH 159
E+ ++ R +H N++ D V +VTEL+ G L R+ S R LH
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 160 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXX-X 215
I + ++ LH+ G++HRDLKP N+L + + L++ DFG A+
Sbjct: 129 T-------IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 216 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE V RQG Y+ D++S GI+L+ +L PF
Sbjct: 182 LMTPCYTANFVAPE----VLKRQG----YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
IG G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++I+ E + G L + A DI A+ LH++ I HRD+KP+NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T +K LKL DFG A+ Y ++APE+ G +K Y+ D
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVL-------GPEK-YDKSCD 192
Query: 250 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 282
++S G++++ LL PF SN A + K
Sbjct: 193 MWSLGVIMYILLCGFPPF--YSNTGQAISPGMK 223
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
IG G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 62 IGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G ++G G V + R G A + R +S R + REVN++ ++H
Sbjct: 16 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L L A F I + LH+
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHS 133
Query: 178 NGIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--Y 231
I H DLKP+N++L P+ + +KL DFG+A ++APE+ Y
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF------EGMSNLQAA 276
+ L + D++S G++ + LL+ PF E ++N+ A
Sbjct: 193 EPLGL----------EADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 41/235 (17%)
Query: 50 DRSLLVDPKLLFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIR 107
DR L D L + +G+G+ GKV E + D + A+K+L + I+
Sbjct: 15 DRMKLTDFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVV-----------IQ 60
Query: 108 EVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDL--HV----- 160
+ ++ + ++ G K P + + M R Y V N DL H+
Sbjct: 61 DDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVGR 117
Query: 161 -----ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
A+ +A +IA + L + GII+RDLK DN++L + +K+ADFG+ +
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGV 176
Query: 216 XXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
++APE+ + + Y VD ++FG++L+E+L + PFEG
Sbjct: 177 TTKXFCGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 62 IGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G ++G G V + R G A + R +S R + REVN++ ++H
Sbjct: 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L L A F I + LH+
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHS 126
Query: 178 NGIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--Y 231
I H DLKP+N++L P+ + +KL DFG+A ++APE+ Y
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF------EGMSNLQAA 276
+ L + D++S G++ + LL+ PF E ++N+ A
Sbjct: 186 EPLGL----------EADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 30/241 (12%)
Query: 34 RAVVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHG--KVYEGRYGDRIVAIKVLNR 91
RA V G + P ++ D IG G G ++ + +VA+K + R
Sbjct: 3 RAPVTTGPLDMP-------IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER 55
Query: 92 GSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVS 150
G+ DE RE+ ++H N+V+F P + I+ E G L + + +
Sbjct: 56 GAAIDENVQ------REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN 109
Query: 151 LRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLAR 208
+ A F + + H+ I HRDLK +N LL +P + LK+ DFG ++
Sbjct: 110 A--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSK 166
Query: 209 XXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPF 267
++APE V LRQ Y+ K+ DV+S G+ L+ +L PF
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPE----VLLRQ----EYDGKIADVWSCGVTLYVMLVGAYPF 218
Query: 268 E 268
E
Sbjct: 219 E 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 49 IDRSLLVDPKLLF-----IGSKIGEGAHGKVYE--GRYGDRIVAIKVLNRGSTSDERALL 101
+ R + D +LF + IG+G V R + A+K+++ + L
Sbjct: 12 VPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS 71
Query: 102 EGRFIREVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH- 159
RE ++ +KH ++V+ L D ++ +V E + G L +V R + ++
Sbjct: 72 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYS 130
Query: 160 --VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLA-RXXXXXX 214
VA ++ I A+ H N IIHRD+KP +LL + S +KL FG+A +
Sbjct: 131 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 190
Query: 215 XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+MAPE+ +++ Y VDV+ G++L+ LL+ LPF G
Sbjct: 191 VAGGRVGTPHFMAPEVV--------KREPYGKPVDVWGCGVILFILLSGCLPFYG 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 108 EVNMMSRV-KHDNLVKFLGACKDPLMV-IVTELLPGMSL-----RKYLVSLRPNKLDLHV 160
E+ ++ R +H N++ D V +VTEL+ G L R+ S R LH
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXX-XX 216
I + ++ LH+ G++HRDLKP N+L + + L++ DFG A+
Sbjct: 130 -------IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 217 XXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE V RQG Y+ D++S GI+L+ +L PF
Sbjct: 183 MTPCYTANFVAPE----VLKRQG----YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 62 IGSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
IG ++G G K E G A + R S + R + REV+++ +V H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L + L A +F I ++ LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHT 133
Query: 178 NGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L +KL DFGLA ++APE+ Y
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 PLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
IG G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 64 SKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+KIG+G G+V++ R+ G ++ KVL +E+ +RE+ ++ +KH+N+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVL----MENEKEGFPITALREIKILQLLKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK--YLVSLRPNKLDL-----HVALNFAL-DIARAM 172
V + C+ T+ P + YLV + DL +V + F L +I R M
Sbjct: 80 VNLIEICR-------TKASPYNRCKGSIYLV-FDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 173 DCL-------HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
L H N I+HRD+K N+L+T D LKLADFGLAR R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y L GE+ Y +D++ G ++ E+ T +G
Sbjct: 190 VVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 66 IGEGAHGKVYEGRYGD---RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
+G G +G V+ D R+ K++ S + AL RE+ ++ R+ HDN+VK
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL------REIKIIRRLDHDNIVK 72
Query: 123 ---FLGACKDPLMVIV---TELLPGMSLRKYLVSLRPNKLDLHVALN-----FALDIARA 171
LG L V TEL +++Y+ + N L+ L F + R
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRG 132
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---XXXXXYRWM-A 227
+ +H+ ++HRDLKP NL + + LK+ DFGLAR +W +
Sbjct: 133 LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 274
P L + +Y +D+++ G + E+LT + F G L+
Sbjct: 193 PRLLLS-------PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 64 SKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+KIG+G G+V++ R+ G ++ KVL +E+ +RE+ ++ +KH+N+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVL----MENEKEGFPITALREIKILQLLKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK--YLVSLRPNKLDL-----HVALNFAL-DIARAM 172
V + C+ T+ P + YLV + DL +V + F L +I R M
Sbjct: 80 VNLIEICR-------TKASPYNRCKASIYLV-FDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 173 DCL-------HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
L H N I+HRD+K N+L+T D LKLADFGLAR R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y L GE+ Y +D++ G ++ E+ T +G
Sbjct: 190 VVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 85 AIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMS 143
A+K+++ + L RE ++ +KH ++V+ L D ++ +V E + G
Sbjct: 53 AVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD 112
Query: 144 LRKYLVSLRPNKLDLH---VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS-- 198
L +V R + ++ VA ++ I A+ H N IIHRD+KP +LL + S
Sbjct: 113 LCFEIVK-RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAP 171
Query: 199 LKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL 257
+KL FG+A + +MAPE+ +++ Y VDV+ G++L
Sbjct: 172 VKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV--------KREPYGKPVDVWGCGVIL 223
Query: 258 WELLTNRLPFEG 269
+ LL+ LPF G
Sbjct: 224 FILLSGCLPFYG 235
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 45 PQLTIDRSLLVDPKLLFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSD----ER 98
P +DR L D L + +G+G+ GKV + + + + AIK+L + E
Sbjct: 9 PSNNLDRVKLTDFNFLMV---LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 99 ALLEGRFIREVNMMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKL 156
++E R +++ + + L +C + + V E + G L ++ + K
Sbjct: 66 TMVEKR------VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKF 117
Query: 157 DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX-XX 215
A+ +A +I+ + LH GII+RDLK DN++L + +K+ADFG+ +
Sbjct: 118 KEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVT 176
Query: 216 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
++APE+ + + Y VD +++G++L+E+L + PF+G
Sbjct: 177 TREFCGTPDYIAPEIIAY--------QPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 62 IGSKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G ++G G V + R G A + R S R + REVN++ ++H
Sbjct: 30 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 119 NLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
N++ ++ +V++ EL+ G L +L L A F I + LH+
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHS 147
Query: 178 NGIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--Y 231
I H DLKP+N++L P+ + +KL DFG+A ++APE+ Y
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 232 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 207 EPLGL----------EADMWSIGVITYILLSGASPFLG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 64 SKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+KIG+G G+V++ R+ G ++ KVL +E+ +RE+ ++ +KH+N+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVL----MENEKEGFPITALREIKILQLLKHENV 79
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK--YLVSLRPNKLDL-----HVALNFAL-DIARAM 172
V + C+ T+ P + YLV + DL +V + F L +I R M
Sbjct: 80 VNLIEICR-------TKASPYNRCKGSIYLV-FDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 173 DCL-------HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
L H N I+HRD+K N+L+T D LKLADFGLAR R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNR- 189
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y L GE+ Y +D++ G ++ E+ T +G
Sbjct: 190 VVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++K + KDP+ +V E + ++ L D + + ++ +A+D
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL----TDFDIRF-YMYELLKALDYC 153
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ QK L+L D+GLA + PEL
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ R PF
Sbjct: 214 M-------YDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 64 SKIGEGAHGKVYEGRY---GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNL 120
+KIG+G G+V++ R+ G ++ KVL +E+ +RE+ ++ +KH+N+
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVL----MENEKEGFPITALREIKILQLLKHENV 78
Query: 121 VKFLGACKDPLMVIVTELLPGMSLRK--YLVSLRPNKLDL-----HVALNFAL-DIARAM 172
V + C+ T+ P + YLV + DL +V + F L +I R M
Sbjct: 79 VNLIEICR-------TKASPYNRCKGSIYLV-FDFCEHDLAGLLSNVLVKFTLSEIKRVM 130
Query: 173 DCL-------HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 225
L H N I+HRD+K N+L+T D LKLADFGLAR R
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNR- 188
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ Y L GE+ Y +D++ G ++ E+ T +G
Sbjct: 189 VVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQG 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV--KHDNLVKF 123
+G+G +G+V+ G + VA+K+ S+ DE++ + RE + + V +H+N++ F
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKS-----WFRETELYNTVMLRHENILGF 67
Query: 124 LGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ + + ++T SL YL + LD L L IA + LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-----XXXYRW 225
I HRDLK N+L+ + + +AD GLA R+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
MAPE+ Q + +VD+++FG+VLWE+
Sbjct: 184 MAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV--KHDNLVKF 123
+G+G +G+V+ G + VA+K+ S+ DE++ + RE + + V +H+N++ F
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKS-----WFRETELYNTVMLRHENILGF 96
Query: 124 LGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ + + ++T SL YL + LD L L IA + LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-----XXXYRW 225
I HRDLK N+L+ + + +AD GLA R+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
MAPE+ Q + +VD+++FG+VLWE+
Sbjct: 213 MAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA +V E + ++VAIK + + + + EG E+ ++ ++KH N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + ++ +L+ G L +V A + A+ LH GI+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 183 RDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
RDLKP+NLL L D K + ++DFGL++ ++APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA------- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+K Y+ VD +S G++ + LL PF
Sbjct: 192 -QKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++K + KDP+ +V E + ++ L D + + ++ +A+D
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL----TDFDIRF-YMYELLKALDYC 148
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ QK L+L D+GLA + PEL
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ R PF
Sbjct: 209 M-------YDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV--KHDNLVKF 123
+G+G +G+V+ G + VA+K+ S+ DE++ + RE + + V +H+N++ F
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKS-----WFRETELYNTVMLRHENILGF 67
Query: 124 LGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ + + ++T SL YL + LD L L IA + LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-----XXXYRW 225
I HRDLK N+L+ + + +AD GLA R+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
MAPE+ Q + +VD+++FG+VLWE+
Sbjct: 184 MAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA +V E + ++VAIK + + + + EG E+ ++ ++KH N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + ++ +L+ G L +V A + A+ LH GI+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 183 RDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
RDLKP+NLL L D K + ++DFGL++ ++APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA------- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+K Y+ VD +S G++ + LL PF
Sbjct: 192 -QKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA +V E + ++VAIK + + + + EG E+ ++ ++KH N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + ++ +L+ G L +V A + A+ LH GI+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 183 RDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
RDLKP+NLL L D K + ++DFGL++ ++APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA------- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+K Y+ VD +S G++ + LL PF
Sbjct: 192 -QKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 66 IGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
IG G GKVY+G D VA+K + E + F E+ +S +H +LV +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 125 GACKD-PLMVIVTELLPGMSLRKYLVS--LRPNKLDLHVALNFALDIARAMDCLHANGII 181
G C + M+++ + + +L+++L L + L + AR + LH II
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 182 HRDLKPDNLLLTPDQKSL-KLADFGLARXXX---XXXXXXXXXXXYRWMAPELYSTVTLR 237
HRD+K N+LL D+ + K+ DFG+++ ++ PE +
Sbjct: 162 HRDVKSINILL--DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI----- 214
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNR 264
K K DVYSFG+VL+E+L R
Sbjct: 215 ---KGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 59/251 (23%)
Query: 66 IGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G++G VY + ++ VAIK +NR E + R +RE+ +++R+K D +++
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMF---EDLIDCKRILREITILNRLKSDYIIRL 92
Query: 124 --LGACKDPL----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
L +D L + IV E+ L+K + P L ++ +H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADS-DLKKLFKT--PIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 178 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX------------------------- 212
+GIIHRDLKP N LL D S+K+ DFGLAR
Sbjct: 150 SGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 213 XXXXXXXXXXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL---------- 261
RW APEL + L++ Y N +D++S G + ELL
Sbjct: 209 LKKQLTSHVVTRWYRAPEL---ILLQEN----YTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 262 TNRLP-FEGMS 271
TNR P F G S
Sbjct: 262 TNRFPLFPGSS 272
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 66 IGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA +V E + ++VAIK + + + + EG E+ ++ ++KH N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 124 LGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
+ + ++ +L+ G L +V A + A+ LH GI+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 183 RDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 239
RDLKP+NLL L D K + ++DFGL++ ++APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA------- 191
Query: 240 EKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+K Y+ VD +S G++ + LL PF
Sbjct: 192 -QKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 66 IGEGAHGKVYEGRYGDRI-VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
IG G GKVY+G D VA+K + E + F E+ +S +H +LV +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 125 GACKD-PLMVIVTELLPGMSLRKYLV--SLRPNKLDLHVALNFALDIARAMDCLHANGII 181
G C + M+++ + + +L+++L L + L + AR + LH II
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 182 HRDLKPDNLLLTPDQKSL-KLADFGLARXXX---XXXXXXXXXXXYRWMAPELYSTVTLR 237
HRD+K N+LL D+ + K+ DFG+++ ++ PE +
Sbjct: 162 HRDVKSINILL--DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI----- 214
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNR 264
K K DVYSFG+VL+E+L R
Sbjct: 215 ---KGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G++ KV R DRI A+KV+ + +D+ + E ++ + + +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFLVG 85
Query: 124 LGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L +C + + V E + G L ++ R KL A ++ +I+ A++ LH GII
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGII 143
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGE 240
+RDLK DN+LL + +KL D+G+ + ++APE+ +GE
Sbjct: 144 YRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGE 196
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFE 268
Y VD ++ G++++E++ R PF+
Sbjct: 197 D--YGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 117 HDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR----A 171
H N+VK D L +V ELL G L + + K H + A I R A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI------KKKKHFSETEASYIMRKLVSA 118
Query: 172 MDCLHANGIIHRDLKPDNLLLTPDQKSL--KLADFGLARXX-XXXXXXXXXXXXYRWMAP 228
+ +H G++HRDLKP+NLL T + +L K+ DFG AR + AP
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
EL + + Y+ D++S G++L+ +L+ ++PF+
Sbjct: 179 ELLN--------QNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 162 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 221
++++ +AR M+ L + IHRDL N+LL+ + +K+ DFGLAR
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 222 X---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
+WMAPE ++ + Y+ K DV+S+G++LWE+ +
Sbjct: 261 TRLPLKWMAPESIFDKI---------YSTKSDVWSYGVLLWEIFS 296
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 60 LFIGSKIGEGAHGKVYEGR-YG------DRIVAIKVLNRGSTSDERALLEGRFIREVNMM 112
L +G +G GA GKV + +G R VA+K+L G+T+ E L + E+ ++
Sbjct: 29 LKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKAL----MTELKIL 84
Query: 113 SRVKHD-NLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLR 152
+ + H N+V LGAC PLMVIV G +L YL S R
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG-NLSNYLKSKR 127
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 36/262 (13%)
Query: 40 GSITAPQLTIDRSLLVDPKLLFIGSK---IGEGAHGKVYEGRYGD-------RIVAIKVL 89
GS P I +LVDP+ + +G+G K +E D +IV +L
Sbjct: 1 GSAAPPAKEIP-EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL 59
Query: 90 NRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYL 148
+ ++ ++ E+++ + H ++V F G +D + +V EL R+ L
Sbjct: 60 LKPHQREKMSM-------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSL 108
Query: 149 VSL--RPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL 206
+ L R L A + I LH N +IHRDLK NL L D + +K+ DFGL
Sbjct: 109 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGL 167
Query: 207 A-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL 265
A + ++APE+ S KK ++ +VDV+S G +++ LL +
Sbjct: 168 ATKVEYDGERKKTLCGTPNYIAPEVLS--------KKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 266 PFEGMSNLQAAYAAAFKVQESI 287
PFE S L+ Y K + SI
Sbjct: 220 PFE-TSCLKETYLRIKKNEYSI 240
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G++ KV R DRI A+KV+ + +D+ + E ++ + + +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFLVG 70
Query: 124 LGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L +C + + V E + G L ++ R KL A ++ +I+ A++ LH GII
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGII 128
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGE 240
+RDLK DN+LL + +KL D+G+ + ++APE+ +GE
Sbjct: 129 YRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGE 181
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFE 268
Y VD ++ G++++E++ R PF+
Sbjct: 182 D--YGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 66 IGEGAHGKVYEGRYGDRI-VAIK-VLNRGSTSDER-------ALLEGRFIREVNMMSRVK 116
I G++G V G + I VAIK V N + SD R + L R +RE+ +++
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFN--TVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 117 HDNLV---KFLGACKDPLM---VIVTELLP---GMSLRKYLVSLRPNKLDLHVALNFALD 167
H N++ ++P M +VTEL+ + + + P + F
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-----FMYH 142
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 227
I + LH G++HRDL P N+LL D + + DF LAR + A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
PEL + K + VD++S G V+ E+ + F G
Sbjct: 202 PELVM-------QFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 66 IGEGAHGKVYEGRYGDRI-VAIK-VLNRGSTSDER-------ALLEGRFIREVNMMSRVK 116
I G++G V G + I VAIK V N + SD R + L R +RE+ +++
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFN--TVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 117 HDNLV---KFLGACKDPLM---VIVTELLP---GMSLRKYLVSLRPNKLDLHVALNFALD 167
H N++ ++P M +VTEL+ + + + P + F
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-----FMYH 142
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 227
I + LH G++HRDL P N+LL D + + DF LAR + A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
PEL + K + VD++S G V+ E+ + F G
Sbjct: 202 PELVM-------QFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G++ KV R DRI A++V+ + +D+ + E ++ + + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFLVG 117
Query: 124 LGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L +C + + V E + G L ++ R KL A ++ +I+ A++ LH GII
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGII 175
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGE 240
+RDLK DN+LL + +KL D+G+ + ++APE+ +GE
Sbjct: 176 YRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL------RGE 228
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFE 268
Y VD ++ G++++E++ R PF+
Sbjct: 229 D--YGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 62 IGSKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
I ++G GA G V+ + R+ K +N D+ + E+++M+++ H
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK-----NEISIMNQLHHPK 109
Query: 120 LVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
L+ A +D MV++ E L G L ++ K+ +N+ + +H +
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 179 GIIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
I+H D+KP+N++ T S+K+ DFGLA + APE+
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV------ 222
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 275
+++ D+++ G++ + LL+ PF G +L+
Sbjct: 223 --DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 66 IGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G++ KV R DRI A+KV+ + +D+ + E ++ + + +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFLVG 74
Query: 124 LGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGII 181
L +C + + V E + G L ++ R KL A ++ +I+ A++ LH GII
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGII 132
Query: 182 HRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGE 240
+RDLK DN+LL + +KL D+G+ + ++APE+ +GE
Sbjct: 133 YRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGE 185
Query: 241 KKHYNNKVDVYSFGIVLWELLTNRLPFE 268
Y VD ++ G++++E++ R PF+
Sbjct: 186 D--YGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 66 IGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G G ++ + + +VA+K + RG DE RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 80
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
P + IV E G L + + + + A F + + HA + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 183 RDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLK +N LL +P + LK+ FG ++ ++APE+
Sbjct: 139 RDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-------- 189
Query: 241 KKHYNNKV-DVYSFGIVLWELLTNRLPFE 268
KK Y+ KV DV+S G+ L+ +L PFE
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 66 IGEGAHGKVYEGRY---GDRIVAIKVLNRG----STSDERALLEGRFIREVNMMSRVKHD 118
+G+G+ GKV R GD + A+KVL + E + E R + ++R H
Sbjct: 31 LGKGSFGKVMLARVKETGD-LYAVKVLKKDVILQDDDVECTMTEKRILS----LAR-NHP 84
Query: 119 NLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA 177
L + + P + V E + G L ++ R + D A +A +I A+ LH
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHD 142
Query: 178 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTL 236
GII+RDLK DN+LL + KLADFG+ + ++APE+ +
Sbjct: 143 KGIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML- 200
Query: 237 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
Y VD ++ G++L+E+L PFE
Sbjct: 201 -------YGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 66 IGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G G ++ + + +VA+K + RG + RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEK------IAANVKREIINHRSLRHPNIVRF 80
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
P + IV E G L + + + + A F + + HA + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 183 RDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLK +N LL +P + LK+ DFG ++ ++APE+
Sbjct: 139 RDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-------- 189
Query: 241 KKHYNNKV-DVYSFGIVLWELLTNRLPFE 268
KK Y+ KV DV+S G+ L+ +L PFE
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 66 IGEGAHGKVYEGRYGDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG+G+ G+V + Y ++ VA+K++ +A E R + + + N++
Sbjct: 105 IGKGSFGQVVKA-YDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 123 FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
L + +T L M+L + + + L + FA I + +D LH N IIH
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 183 RDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
DLKP+N+LL +S +K+ DFG + YR APE+
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGA------- 274
Query: 242 KHYNNKVDVYSFGIVLWELLT 262
Y +D++S G +L ELLT
Sbjct: 275 -RYGMPIDMWSLGCILAELLT 294
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 66 IGEGAHGKVYEGRYGDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG+G+ G+V + Y ++ VA+K++ +A E R + + + N++
Sbjct: 105 IGKGSFGQVVKA-YDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 123 FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
L + +T L M+L + + + L + FA I + +D LH N IIH
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 183 RDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
DLKP+N+LL +S +K+ DFG + YR APE+
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGA------- 274
Query: 242 KHYNNKVDVYSFGIVLWELLT 262
Y +D++S G +L ELLT
Sbjct: 275 -RYGMPIDMWSLGCILAELLT 294
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 107 REVNMMSRVKHDNLVKFLGACKDP---LMVIVTELL---PGMSLRKYLVSLRPNKLDLHV 160
+E+ ++ ++ H N+VK + DP + +V EL+ P M + +L+P L
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKP--LSEDQ 138
Query: 161 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 220
A + D+ + ++ LH IIHRD+KP NLL+ D +K+ADFG++
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNT 197
Query: 221 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+MAPE +L + K +DV++ G+ L+ + + PF
Sbjct: 198 VGTPAFMAPE-----SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G K +E D +IV +L + ++ ++ E+++ + H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-------EISIHRSLAHQ 75
Query: 119 NLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCL 175
++V F G +D + +V EL R+ L+ L R L A + I L
Sbjct: 76 HVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTV 234
H N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-- 188
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESI 287
KK ++ +VDV+S G +++ LL + PFE S L+ Y K + SI
Sbjct: 189 ------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSI 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 66 IGEGAHGKVY-----EGRYGDRIVAIKVLNRGS----------TSDERALLEGRFIREVN 110
+G GA+GKV+ G ++ A+KVL + + T ER +LE IR+
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE--HIRQSP 119
Query: 111 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+ + + F K + ++ + + G L +L + + H + +I
Sbjct: 120 FLVTLHY----AFQTETK---LHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVL 170
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAP 228
A++ LH GII+RD+K +N+LL + + L DFGL++ +MAP
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 229 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQA 275
++ +R G+ H + VD +S G++++ELLT PF +G N QA
Sbjct: 230 DI-----VRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G K +E D +IV +L + ++ ++ E+++ + H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-------EISIHRSLAHQ 77
Query: 119 NLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCL 175
++V F G +D + +V EL R+ L+ L R L A + I L
Sbjct: 78 HVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTV 234
H N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS-- 190
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESI 287
KK ++ +VDV+S G +++ LL + PFE S L+ Y K + SI
Sbjct: 191 ------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSI 236
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G K +E D +IV +L + ++ ++ E+++ + H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-------EISIHRSLAHQ 77
Query: 119 NLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCL 175
++V F G +D + +V EL R+ L+ L R L A + I L
Sbjct: 78 HVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTV 234
H N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS-- 190
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESI 287
KK ++ +VDV+S G +++ LL + PFE S L+ Y K + SI
Sbjct: 191 ------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSI 236
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 12 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ + P L ++ L +A +F + A+
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 129
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 182
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 183 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 66 IGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG G G ++ + + +VA+K + RG DE RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 80
Query: 124 LGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
P + IV E G L + + + + A F + + HA + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 183 RDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 240
RDLK +N LL +P + LK+ FG ++ ++APE+
Sbjct: 139 RDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL-------- 189
Query: 241 KKHYNNKV-DVYSFGIVLWELLTNRLPFE 268
KK Y+ KV DV+S G+ L+ +L PFE
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN--L 120
++G G G+V++ R+ ++A+K + R +E R + +++++ + HD +
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK----RILMDLDVVLK-SHDCPYI 86
Query: 121 VKFLGACKDPLMVIVTELLPGMS---LRKYLVSLRPNKL--DLHVALNFALDIARAMDCL 175
V+ G V + L G L+K + P ++ + VA+ AL +
Sbjct: 87 VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK----- 141
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
+G+IHRD+KP N+LL ++ +KL DFG++ +MAPE +
Sbjct: 142 EKHGVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE---RID 197
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
K Y+ + DV+S GI L EL T + P++
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 22 QHVLRGSVEKESRAVVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEG--RY 79
QH + GS ++ + + S + S P I IG G++G V E +
Sbjct: 17 QHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKL 76
Query: 80 GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLGAC------KDPLMV 133
R+VAIK + R E + R +RE+ +++R+ HD++VK L K +
Sbjct: 77 EKRVVAIKKILRVF---EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133
Query: 134 IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLT 193
+V E+ S K L +LH+ ++ + +H+ GI+HRDLKP N L+
Sbjct: 134 VVLEI--ADSDFKKLFRTPVYLTELHIK-TLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190
Query: 194 PDQKSLKLADFGLAR 208
D S+K+ DFGLAR
Sbjct: 191 QDC-SVKVCDFGLAR 204
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G K +E D +IV +L + ++ ++ E+++ + H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-------EISIHRSLAHQ 99
Query: 119 NLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCL 175
++V F G +D + +V EL R+ L+ L R L A + I L
Sbjct: 100 HVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 155
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTV 234
H N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-- 212
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESI 287
KK ++ +VDV+S G +++ LL + PFE S L+ Y K + SI
Sbjct: 213 ------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSI 258
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 66 IGEGAHGKVYEGRYGD-------RIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHD 118
+G+G K +E D +IV +L + ++ ++ E+++ + H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-------EISIHRSLAHQ 101
Query: 119 NLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCL 175
++V F G +D + +V EL R+ L+ L R L A + I L
Sbjct: 102 HVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 157
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTV 234
H N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-- 214
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESI 287
KK ++ +VDV+S G +++ LL + PFE S L+ Y K + SI
Sbjct: 215 ------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSI 260
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 107 REVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNF 164
RE + +KH N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHC 108
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I +++ H NGI+HRDLKP+NLLL K ++KLADFGLA
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--------IEVQGDQ 160
Query: 223 YRWM----APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
W P S LR K Y VD+++ G++L+ LL PF
Sbjct: 161 QAWFGFAGTPGYLSPEVLR---KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 57 PKLLFIGSKIGEGAHGKVY--EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR 114
P I IG G++G VY + ++ VAIK +NR E + R +RE+ +++R
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF---EDLIDCKRILREITILNR 81
Query: 115 VKHDNLVKFLGACKDPLMVIVTEL-----LPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
+K D +++ ++ EL + L+K + P L ++
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT--PIFLTEEHIKTILYNLL 139
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP- 228
+ +H +GIIHRDLKP N LL D S+K+ DFGLAR P
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 229 --------ELYSTVTLRQGE-------KKHYNNKVDVYSFGIVLWELL----------TN 263
+L S V R +++Y +D++S G + ELL TN
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 264 RLP-FEGMS 271
R P F G S
Sbjct: 259 RFPLFPGSS 267
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNM-MSRVKHDNLV 121
++G GA+G V + R+ +I+A+K + S E+ R + ++++ M V V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK----RLLMDLDISMRTVDCPFTV 113
Query: 122 KFLGAC-KDPLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCLHAN 178
F GA ++ + I EL+ SL K+ + + + + A+ I +A++ LH+
Sbjct: 114 TFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 179 -GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
+IHRD+KP N+L+ +K+ DFG++ +MAPE +
Sbjct: 173 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP---- 227
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ +K Y+ K D++S GI + EL R P++
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF------PF 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFGLA+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGLAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 107 REVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNF 164
RE + +KH N+V+ + ++ +V +L+ G L + +V+ ++ D A +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHC 108
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I +++ H NGI+HRDLKP+NLLL K ++KLADFGLA
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA------ 162
Query: 223 YRWM----APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
W P S LR K Y VD+++ G++L+ LL PF
Sbjct: 163 --WFGFAGTPGYLSPEVLR---KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 182 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 234
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 235 G----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 43/248 (17%)
Query: 36 VVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTS 95
+ +GS + L + R++ + + + IG+G G+V+ G++ VA+K+ S+
Sbjct: 10 MTTSGSGSGLPLLVQRTI---ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSR 63
Query: 96 DERALLEGRFIREVNMMSRVKHDNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVS 150
+ER+ I + M+ +H+N++ F+ A KD + +V++ SL YL
Sbjct: 64 EERSWFREAEIYQTVML---RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-- 118
Query: 151 LRPNKLDLHVA--LNFALDIARAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLK 200
N+ + V + AL A + LH I HRDLK N+L+ + +
Sbjct: 119 ---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCC 174
Query: 201 LADFGLARXXXXXXXXXXXXXXY-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYS 252
+AD GLA + R+MAPE L ++ + KH+ + + D+Y+
Sbjct: 175 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYA 229
Query: 253 FGIVLWEL 260
G+V WE+
Sbjct: 230 MGLVFWEI 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R + VN
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF------ 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 164 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 223
+ + RA+ +H+ GI HRD+KP NLL+ +LKL DFG A+
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR 205
Query: 224 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 273
+ APEL T Y +D++S G V EL+ + F G +++
Sbjct: 206 FYRAPELMLGAT-------EYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWTLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 43/248 (17%)
Query: 36 VVKNGSITAPQLTIDRSLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTS 95
+ +GS + L + R++ + + + IG+G G+V+ G++ VA+K+ S+
Sbjct: 23 MTTSGSGSGLPLLVQRTI---ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSR 76
Query: 96 DERALLEGRFIREVNMMSRVKHDNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVS 150
+ER+ I + M+ +H+N++ F+ A KD + +V++ SL YL
Sbjct: 77 EERSWFREAEIYQTVML---RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-- 131
Query: 151 LRPNKLDLHVA--LNFALDIARAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLK 200
N+ + V + AL A + LH I HRDLK N+L+ + +
Sbjct: 132 ---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCC 187
Query: 201 LADFGLARXXXXXXXXXXXXXXY-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYS 252
+AD GLA + R+MAPE L ++ + KH+ + + D+Y+
Sbjct: 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYA 242
Query: 253 FGIVLWEL 260
G+V WE+
Sbjct: 243 MGLVFWEI 250
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 154 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 206
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 207 G----YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 66 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRV--KHDNLVKF 123
+G+G +G+V+ G + VA+K+ S+ DE++ + RE + + V +HDN++ F
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIF---SSRDEQS-----WFRETEIYNTVLLRHDNILGF 67
Query: 124 LGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
+ + + ++T SL +L + L+ H+AL A+ A + LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-----XXXYRW 225
I HRD K N+L+ + + +AD GLA R+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCC-IADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 260
MAPE+ +R + Y D+++FG+VLWE+
Sbjct: 184 MAPEVLDE-QIRTDCFESYK-WTDIWAFGLVLWEI 216
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 66 IGEGAHGKVYEGRYGDRI---VAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVK 122
IG+G G+V + Y ++ VA+K++ +A E R + + + N++
Sbjct: 105 IGKGXFGQVVKA-YDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 123 FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIH 182
L + +T L M+L + + + L + FA I + +D LH N IIH
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 183 RDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
DLKP+N+LL +S +K+ DFG + YR APE+
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR--APEVILGA------- 274
Query: 242 KHYNNKVDVYSFGIVLWELLT 262
Y +D++S G +L ELLT
Sbjct: 275 -RYGMPIDMWSLGCILAELLT 294
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 88
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 147 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWTLCGTPEY--LAPE----IILSK 199
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 200 G----YNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 154 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 206
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 207 G----YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 66 IGEGAHGKV--YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G+V + + D++ A+K+LN+ R R+V + K + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
+ L +++ + G L L+S ++L +A + ++ A+D +H +HR
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLT--LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 184 DLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
D+KPDN+L+ + ++LADFG L +++PE+ + +G K
Sbjct: 200 DIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM---EGGK 255
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
Y + D +S G+ ++E+L PF S L Y +E P
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKERFQFP 303
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 171 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 230
A+ LHAN I+HRDLKP+N+LL D ++L+DFG + ++APE+
Sbjct: 212 AVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
Query: 231 YSTVTLRQGEKKH--YNNKVDVYSFGIVLWELLTNRLPF 267
++ H Y +VD+++ G++L+ LL PF
Sbjct: 271 LKCSM----DETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 125
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 178
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 179 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 130
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 183
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 184 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 22/115 (19%)
Query: 160 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 219
V L+ + IA A++ LH+ G++HRDLKP N+ T D +K+ DFGL
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTV 223
Query: 220 XXXYR-------------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
+M+PE Q +Y++KVD++S G++L+ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPE--------QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNM-MSRVKHDNLV 121
++G GA+G V + R+ +I+A+K + S E+ R + ++++ M V V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK----RLLMDLDISMRTVDCPFTV 69
Query: 122 KFLGAC-KDPLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCLHAN 178
F GA ++ + I EL+ SL K+ + + + + A+ I +A++ LH+
Sbjct: 70 TFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 179 -GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 237
+IHRD+KP N+L+ +K+ DFG++ +MAPE +
Sbjct: 129 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP---- 183
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ +K Y+ K D++S GI + EL R P++
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 65 KIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFL 124
+IG+G +G+V+ G++ VA+KV T++E + I + +M +H+N++ F+
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVF---FTTEEASWFRETEIYQTVLM---RHENILGFI 97
Query: 125 -----GACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN- 178
G + ++T+ SL YL S LD L A + LH
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 179 -------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX-----XXXXXYRWM 226
I HRDLK N+L+ + + +AD GLA R+M
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 227 APELYSTVTLRQGEKKHYNNKV--DVYSFGIVLWEL 260
PE+ R H+ + + D+YSFG++LWE+
Sbjct: 214 PPEVLDESLNRN----HFQSYIMADMYSFGLILWEV 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 53 LLVDPKLL---FIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEG----RF 105
+LVDP+ + G +G+G K YE D K + G + LL+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD----TKEVFAGKVVPKSMLLKPHQKEKM 89
Query: 106 IREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSL--RPNKLDLHVAL 162
E+ + + + ++V F G +D V +V E+ R+ L+ L R + A
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEAR 145
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXX 221
F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCG 204
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 281
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 205 TPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIK 255
Query: 282 KVQESI 287
K + S+
Sbjct: 256 KNEYSV 261
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 67 GEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF--- 123
G+G G V G+ ++ + V + D R R ++ + ++ + H N+V+
Sbjct: 32 GQGTFGTVQLGK--EKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 124 ---LGAC--KDPLMVIVTELLPGMSLR----KYLVSLRPNKLDLHVALNFALDIARAMDC 174
LG +D + +V E +P R Y + P + + V F + R++ C
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV---FLFQLIRSIGC 144
Query: 175 LH--ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
LH + + HRD+KP N+L+ +LKL DFG A+ + APEL
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF 204
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+HY VD++S G + E++ F G
Sbjct: 205 G-------NQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF------PF 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +++ DFGLA+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIQVTDFGLAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 130
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 183
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 184 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 106/268 (39%), Gaps = 53/268 (19%)
Query: 52 SLLVDPKLLFIGSKIGEGAHG--KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREV 109
SLL K + IG+G++G +V I AIK++N+ R EV
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 110 NMMSRVKHDNLVKFLGACKDP-LMVIVTELLPG-------------------MSLRKYLV 149
+M ++ H N+ + +D + +V EL G M + K +
Sbjct: 80 RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139
Query: 150 SLRPN---------------KLDL----HVALNFALDIARAMDCLHANGIIHRDLKPDNL 190
P LD + N I A+ LH GI HRD+KP+N
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENF 199
Query: 191 LLTPDQK-SLKLADFGLARXXXXXXXXXXXXXXYR-----WMAPELYSTVTLRQGEKKHY 244
L + ++ +KL DFGL++ + ++APE+ +T + Y
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN------ESY 253
Query: 245 NNKVDVYSFGIVLWELLTNRLPFEGMSN 272
K D +S G++L LL +PF G+++
Sbjct: 254 GPKCDAWSAGVLLHLLLMGAVPFPGVND 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 27 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 144
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 197
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 198 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 11 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 128
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 181
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 182 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 164
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 217
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 218 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 130
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 183
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 184 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 35 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 94
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 95 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 152
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 205
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 206 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 12 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 129
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 182
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 183 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 27 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 144
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 197
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 198 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 125
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 178
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 179 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 145
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 199 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 215
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 216 MWSLGVIMYILLCGYPPF 233
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 55 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 172
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 225
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 226 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 145
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 199 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 58 KLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
+ + + IG+G G+V+ G++ VA+K+ S+ +ER+ I + M+ +H
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVML---RH 57
Query: 118 DNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIAR 170
+N++ F+ A KD + +V++ SL YL N+ + V + AL A
Sbjct: 58 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTAS 112
Query: 171 AMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 222
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 171
Query: 223 Y-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYSFGIVLWEL 260
+ R+MAPE L ++ + KH+ + + D+Y+ G+V WE+
Sbjct: 172 HRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYAMGLVFWEI 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 125
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 178
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 179 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 29/246 (11%)
Query: 53 LLVDPKLL---FIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEG----RF 105
+LVDP+ + G +G+G K YE D K + G + LL+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD----TKEVFAGKVVPKSMLLKPHQKEKM 89
Query: 106 IREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSL--RPNKLDLHVAL 162
E+ + + + ++V F G +D V +V E+ R+ L+ L R + A
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEAR 145
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXX 221
F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCG 204
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 281
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 205 TPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIK 255
Query: 282 KVQESI 287
K + S+
Sbjct: 256 KNEYSV 261
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 145
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 198
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 199 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 158
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 211
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 212 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 53 LLVDPKLL---FIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEG----RF 105
+LVDP+ + G +G+G K YE D K + G + LL+ +
Sbjct: 18 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD----TKEVFAGKVVPKSMLLKPHQKEKM 73
Query: 106 IREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSL--RPNKLDLHVAL 162
E+ + + + ++V F G +D V +V E+ R+ L+ L R + A
Sbjct: 74 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEAR 129
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXX 221
F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCG 188
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 281
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 189 TPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIK 239
Query: 282 KVQESI 287
K + S+
Sbjct: 240 KNEYSV 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 157
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 210
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 211 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 55 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 172
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 225
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 226 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 158
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 211
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 212 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 58 KLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
+ + + IG+G G+V+ G++ VA+K+ S+ +ER+ I + M+ +H
Sbjct: 9 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVML---RH 62
Query: 118 DNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIAR 170
+N++ F+ A KD + +V++ SL YL N+ + V + AL A
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTAS 117
Query: 171 AMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 222
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 176
Query: 223 Y-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYSFGIVLWEL 260
+ R+MAPE L ++ + KH+ + + D+Y+ G+V WE+
Sbjct: 177 HRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYAMGLVFWEI 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 53 LLVDPKLL---FIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEG----RF 105
+LVDP+ + G +G+G K YE D K + G + LL+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD----TKEVFAGKVVPKSMLLKPHQKEKM 89
Query: 106 IREVNMMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSL--RPNKLDLHVAL 162
E+ + + + ++V F G +D V +V E+ R+ L+ L R + A
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEAR 145
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXX 221
F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCG 204
Query: 222 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 281
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 205 TPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIK 255
Query: 282 KVQESI 287
K + S+
Sbjct: 256 KNEYSV 261
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 158
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 211
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 212 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 246
Query: 213 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 297
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 22 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 76
Query: 112 MSRVKHD-NLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLR 152
+ + H N+V LGAC PLMVIV E +L YL S R
Sbjct: 77 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKR 120
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 58 KLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
+ + + IG+G G+V+ G++ VA+K+ S+ +ER+ I + M+ +H
Sbjct: 6 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVML---RH 59
Query: 118 DNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIAR 170
+N++ F+ A KD + +V++ SL YL N+ + V + AL A
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTAS 114
Query: 171 AMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 222
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 223 Y-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYSFGIVLWEL 260
+ R+MAPE L ++ + KH+ + + D+Y+ G+V WE+
Sbjct: 174 HRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYAMGLVFWEI 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 212
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 248
Query: 213 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 78
Query: 112 MSRVKHD-NLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLR 152
+ + H N+V LGAC PLMVIV E +L YL S R
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKR 122
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 157
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 210
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 211 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 157
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 210
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 211 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 60 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 177
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 230
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 231 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 58 KLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH 117
+ + + IG+G G+V+ G++ VA+K+ S+ +ER+ I + M+ +H
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVML---RH 56
Query: 118 DNLVKFLGA-CKD----PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALDIAR 170
+N++ F+ A KD + +V++ SL YL N+ + V + AL A
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTAS 111
Query: 171 AMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 222
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 223 Y-----RWMAPE-LYSTVTLRQGEKKHYNN--KVDVYSFGIVLWEL 260
+ R+MAPE L ++ + KH+ + + D+Y+ G+V WE+
Sbjct: 171 HRVGTKRYMAPEVLDDSINM-----KHFESFKRADIYAMGLVFWEI 211
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 157
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 210
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 211 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YST 233
I H DLKP+N++L + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 LGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 17/214 (7%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEG-RFIREVNMMSRVK-- 116
+G +G G G VY G R D + VAIK + + SD L G R EV ++ +V
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 117 HDNLVKFLGACKDP--LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
+++ L + P ++I+ P L ++ L +A +F + A+
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRH 158
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 234
H G++HRD+K +N+L+ ++ LKL DFG +YS
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPP 211
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+ + H V+S GI+L++++ +PFE
Sbjct: 212 EWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 34/248 (13%)
Query: 49 IDRSLLVDPKLLFIGSKIGEGAHGKVYEG---RYGDRIVAIKVLN--RGSTSDERALLEG 103
+DR +L +L+ K+G+GA+G V++ R G+ + K+ + + ST +R
Sbjct: 3 VDRHVLRKYELV---KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--- 56
Query: 104 RFIREVNMMSRVK-HDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL 162
RE+ +++ + H+N+V L + V + M + V +R N L+
Sbjct: 57 ---REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAV-IRANILEPVHKQ 112
Query: 163 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-- 220
+ + + LH+ G++HRD+KP N+LL + +K+ADFGL+R
Sbjct: 113 YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA-ECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 221 --------------XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 266
++A Y + G K Y +D++S G +L E+L +
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTK-YTKGIDMWSLGCILGEILCGKPI 230
Query: 267 FEGMSNLQ 274
F G S +
Sbjct: 231 FPGSSTMN 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 255
Query: 216 XXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 85
Query: 112 MSRVKHD-NLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLR 152
+ + H N+V LGAC PLMVIV E +L YL S R
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKR 129
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 251
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 252 MWSLGVIMYILLCGYPPF 269
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 156 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 215
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 253
Query: 216 XXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 270
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 60 LFIGSKIGEGAHGKVYEG-RYG------DRIVAIKVLNRGST-SDERALLEGRFIREVNM 111
L +G +G GA G+V E +G R VA+K+L G+T S+ RAL+ E+ +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-----ELKI 83
Query: 112 MSRVKHD-NLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLR 152
+ + H N+V LGAC PLMVIV E +L YL S R
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKR 127
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 65 KIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKH-DNLV 121
K+G G + +V+E + V +K+L + + + + RE+ ++ ++ N++
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKIL--------KPVKKNKIKREIKILENLRGGPNII 95
Query: 122 KFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
KDP+ +V E + ++ +L + + +I +A+D H+
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYCHSM 150
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
GI+HRD+KP N+++ + + L+L D+GLA + PEL +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM-- 208
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
Y+ +D++S G +L ++ + PF
Sbjct: 209 -----YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 207
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 208 MWSLGVIMYILLCGYPPF 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 192 PLGL----------EADMWSIGVITYILLSGASPFLG 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 62 IGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G KIG G+ G++Y G + VAIK+ N T + L E + R + + + +
Sbjct: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-KTKHPQLLYESKIYRILQGGTGIPN-- 67
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANG 179
V++ G D V+V +LL G SL L + KL L L A + ++ +H+
Sbjct: 68 -VRWFGVEGD-YNVLVMDLL-GPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 123
Query: 180 IIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYR----WMAPELYST 233
+HRD+KPDN L+ +++ + + DFGLA+ YR Y++
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK--KYRDTSTHQHIPYRENKNLTGTARYAS 181
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGM 270
V G ++ + + D+ S G VL L LP++G+
Sbjct: 182 VNTHLGIEQ--SRRDDLESLGYVLMYFLRGSLPWQGL 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 201
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 202 MWSLGVIMYILLCGYPPF 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 107 REVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 165
RE + +KH N+V+ + ++ +V +L+ G L + +V+ R + +
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA-REYYSEADASHCIQ 110
Query: 166 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXY 223
+ + C H G++HRDLKP+NLLL K ++KLADFGLA
Sbjct: 111 QILEAVLHC-HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA------- 162
Query: 224 RWM----APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
W P S LR K+ Y VD+++ G++L+ LL PF
Sbjct: 163 -WFGFAGTPGYLSPEVLR---KEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 245
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 246 MWSLGVIMYILLCGYPPF 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 192 PLGL----------EADMWSIGVITYILLSGASPFLG 218
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 104 RFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN 163
+F+ EV S V+ N V+ DP+ IV E + G SL++ + KL + A+
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRS----KGQKLPVAEAIA 186
Query: 164 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFG 205
+ L+I A+ LH+ G+++ DLKP+N++LT +Q LKL D G
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ--LKLIDLG 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 201
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 202 MWSLGVIMYILLCGYPPF 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 205
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 206 MWSLGVIMYILLCGYPPF 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YST 233
I H DLKP+N++L + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 LGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YST 233
I H DLKP+N++L + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 LGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 199
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 200 MWSLGVIMYILLCGYPPF 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 200
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 201 MWSLGVIMYILLCGYPPF 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 206
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 207 MWSLGVIMYILLCGYPPF 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YST 233
I H DLKP+N++L + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 LGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL-------GPEK-YDKSCD 199
Query: 250 VYSFGIVLWELLTNRLPF 267
++S G++++ LL PF
Sbjct: 200 MWSLGVIMYILLCGYPPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YST 233
I H DLKP+N++L + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 194 LGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 187
KD L +++T L+ G L+ ++ + A+ +A +I ++ LH I++RDLKP
Sbjct: 256 KDALCLVLT-LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 188 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 247
+N+LL D ++++D GLA +MAPE+ + Y
Sbjct: 315 ENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFS 365
Query: 248 VDVYSFGIVLWELLTNRLPFE 268
D ++ G +L+E++ + PF+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G+GA G+V + R R AIK + ++E+ + EV +++ + H +V++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKL---STILSEVMLLASLNHQYVVRY 67
Query: 124 LGAC--------------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
A K + I E +L + S N+ F I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR-QIL 126
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX------- 222
A+ +H+ GIIHRDLKP N+ + + +++K+ DFGLA+
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 223 --YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +Y + G HYN K+D+YS GI+ +E++ PF
Sbjct: 186 NLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI---YPF 228
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 128 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 187
KD L +++T L+ G L+ ++ + A+ +A +I ++ LH I++RDLKP
Sbjct: 256 KDALCLVLT-LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 188 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 247
+N+LL D ++++D GLA +MAPE+ + Y
Sbjct: 315 ENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFS 365
Query: 248 VDVYSFGIVLWELLTNRLPFE 268
D ++ G +L+E++ + PF+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 63 GSKIGEGAHG---KVYEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
G ++G G K E G + A + R + S R + REV+++ ++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 120 LVKFLGACKDPLMVI-VTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
++ ++ VI + EL+ G L +L L A F I + LH+
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 179 GIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YS 232
I H DLKP+N++L P + +K+ DFGLA ++APE+ Y
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
+ L + D++S G++ + LL+ PF G
Sbjct: 193 PLGL----------EADMWSIGVITYILLSGASPFLG 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 59 LLFIGSKIGE-----GAHGKVYEGRYGDRIVAIKV---LNRGSTSDERALLEG--RFIRE 108
L F GS G+ + G +G+ +A++ + R + + +E RF +E
Sbjct: 14 LYFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQE 73
Query: 109 VNMMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 167
+ +M + H N+++ +D + +V EL G L + +V R + A D
Sbjct: 74 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKD 131
Query: 168 IARAMDCLHANGIIHRDLKPDNLLLTPDQ--KSLKLADFGLARXXXXXXXXXXXXXXYRW 225
+ A+ H + HRDLKP+N L D LKL DFGLA +
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYY 191
Query: 226 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQE 285
++P++ + Y + D +S G++++ LL PF ++ + K++E
Sbjct: 192 VSPQVLEGL---------YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE----VMLKIRE 238
Query: 286 SIYA 289
+
Sbjct: 239 GTFT 242
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
L K + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
L K + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 66 IGEGAHGKVYEGRYG--DRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G+GA G+V + R R AIK + ++E+ + EV +++ + H +V++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKL---STILSEVMLLASLNHQYVVRY 67
Query: 124 LGAC--------------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
A K + I E +L + S N+ F I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR-QIL 126
Query: 170 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX------- 222
A+ +H+ GIIHRDLKP N+ + + +++K+ DFGLA+
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 223 --YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ +Y + G HYN K+D+YS GI+ +E++ PF
Sbjct: 186 NLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI---YPF 228
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 77 GRYGDRIVAIKV---LNRGSTSDERALLEG--RFIREVNMMSRVKHDNLVKFLGACKDPL 131
G +G+ +A++ + R + + +E RF +E+ +M + H N+++ +D
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 132 -MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNL 190
+ +V EL G L + +V R + A D+ A+ H + HRDLKP+N
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSAVAYCHKLNVAHRDLKPENF 137
Query: 191 LLTPDQ--KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 248
L D LKL DFGLA +++P++ + Y +
Sbjct: 138 LFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL---------YGPEC 188
Query: 249 DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYA 289
D +S G++++ LL PF ++ + K++E +
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXE----VMLKIREGTFT 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 191
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 192 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 249
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 245
Query: 250 VYSFGIVLWELLTNRLPF 267
+S G++ + LL PF
Sbjct: 246 XWSLGVIXYILLCGYPPF 263
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 62 IGSKIGEGAHGKVYEG-RYGDRI-VAIKVLNRGSTSDERALLEGRFIR-EVNMMSRVK-- 116
+G +G+G G V+ G R DR+ VAIKV+ R L + EV ++ +V
Sbjct: 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG 94
Query: 117 --HDNLVKFLG--ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 172
H +++ L ++ M+++ LP L Y+ P L + F + A+
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQVVAAI 152
Query: 173 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 232
H+ G++HRD+K +N+L+ + KL DFG + + PE S
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 233 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+++ V+S GI+L++++ +PFE
Sbjct: 212 -------RHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
L K + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 182 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGATWTLCGTPEY--LAPE----IILSK 234
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 235 G----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 89
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ +Q +++ DFG A+ Y +APE + L +
Sbjct: 148 DLIYRDLKPENLLID-EQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 200
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 201 G----YNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 107 REVNMMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNF 164
RE + +KH N+V+ + ++ +V +L+ G L + +V+ ++ D ++
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH- 137
Query: 165 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXX 222
I +++ +H + I+HRDLKP+NLLL K ++KLADFGLA
Sbjct: 138 --QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA------ 189
Query: 223 YRWM----APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
W P S LR K Y VD+++ G++L+ LL PF
Sbjct: 190 --WFGFAGTPGYLSPEVLR---KDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLAGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 66 IGEGAHGKV--YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G+V + + +RI A+K+LN+ R R+V + + + +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
++ L +++ + G L L+S +KL +A + ++ A+D +H +HR
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLT--LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 215
Query: 184 DLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
D+KPDN+LL + ++LADFG L +++PE+ + G+
Sbjct: 216 DIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK- 273
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
Y + D +S G+ ++E+L PF S L Y +E P
Sbjct: 274 --YGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQFP 319
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLXGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 38/216 (17%)
Query: 69 GAHGKVYEGRYGDRIVAIKVL---NRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLG 125
G G V++ + + VA+K+ ++ S ER E+ +KH+NL++F+
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSER---------EIFSTPGMKHENLLQFIA 76
Query: 126 ACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN-- 178
A K + + ++T SL YL + N + + + A ++R + LH +
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 179 ---------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWM 226
I HRD K N+LL D ++ LADFGLA R+M
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 227 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
APE+ Q + ++D+Y+ G+VLWEL++
Sbjct: 193 APEVLEGAINFQ---RDAFLRIDMYAMGLVLWELVS 225
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 66 IGEGAHGKV--YEGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
IG GA G+V + + +RI A+K+LN+ R R+V + + + +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
++ L +++ + G L L+S +KL +A + ++ A+D +H +HR
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLT--LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 199
Query: 184 DLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEK 241
D+KPDN+LL + ++LADFG L +++PE+ + G+
Sbjct: 200 DIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK- 257
Query: 242 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKVQESIYAP 290
Y + D +S G+ ++E+L PF S L Y +E P
Sbjct: 258 --YGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQFP 303
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 69 GAHGKVYEGRYGDRIVAIKVL---NRGSTSDERALLEGRFIREVNMMSRVKHDNLVKFLG 125
G G V++ + + VA+K+ ++ S +E EV + +KH+N+++F+G
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY---------EVYSLPGMKHENILQFIG 85
Query: 126 ACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN-- 178
A K D + ++T SL +L + N + + + A +AR + LH +
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 179 --------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMA 227
I HRD+K N+LL + + +ADFGLA R+MA
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 228 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 269
PE+ Q + ++D+Y+ G+VLWEL + +G
Sbjct: 202 PEVLEGAINFQ---RDAFLRIDMYAMGLVLWELASRCTAADG 240
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 64 SKIGEGAHGKVYEG--RYGDRIVAIKVLNRGSTSDERALLE---GRFIREVNMMSRVKHD 118
S +G GA G V+ + ++ V +K + + ++ + + G+ E+ ++SRV+H
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 119 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
N++K L ++ + G L + R +LD +A + A+ L
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
IIHRD+K +N+++ D ++KL DFG A + APE+ R
Sbjct: 150 DIIHRDIKDENIVIAED-FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG 208
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E ++++S G+ L+ L+ PF
Sbjct: 209 PE-------LEMWSLGVTLYTLVFEENPF 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 182 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 234
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 235 G----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ LR D + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LRQTLTDYDIRF-YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 53 LLVDPKLLFIGSKIGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVN 110
L+V P +G KIG G G++ G+ Y + VAIK+ S + + L E RF +++
Sbjct: 5 LMVGPNFR-VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-EYRFYKQLG 62
Query: 111 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 170
+ V + G C +V ELL G SL L L L L A+ +
Sbjct: 63 SGDGIPQ---VYYFGPCGK-YNAMVLELL-GPSLED-LFDLCDRTFSLKTVLMIAIQLIS 116
Query: 171 AMDCLHANGIIHRDLKPDNLLL----TPDQKSLKLADFGLAR 208
M+ +H+ +I+RD+KP+N L+ Q+ + + DFGLA+
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 86 IKVLNRGSTSDERAL-LEGRFIREVNMMSRVK-HDNLVKFLGACK-DPLMVIVTELLPGM 142
I V GS S E L ++EV+++ +V H N+++ + + +V +L+
Sbjct: 50 IDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 109
Query: 143 SLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKL 201
L YL + ++ + + L++ A LH I+HRDLKP+N+LL D ++KL
Sbjct: 110 ELFDYLTEKVTLSEKETRKIMRALLEVICA---LHKLNIVHRDLKPENILLD-DDMNIKL 165
Query: 202 ADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
DFG + ++APE+ Y +VD++S G++++ LL
Sbjct: 166 TDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSM--NDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 262 TNRLPF 267
PF
Sbjct: 224 AGSPPF 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 50/242 (20%)
Query: 66 IGEGAHGKVYEGR--YGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVK-HDNLVK 122
+ EG VYE + R A+K L RA+ I+EV M ++ H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI-----IQEVCFMKKLSGHPNIVQ 90
Query: 123 FLGACK---------DPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAM 172
F A +++TEL G L ++L + L L RA+
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 173 DCLHANG--IIHRDLKPDNLLLTPDQKSLKLADFGLA---------------RXXXXXXX 215
+H IIHRDLK +NLLL+ +Q ++KL DFG A R
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 216 XXXXXXXYRWMAPE---LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 272
YR PE LYS + GEK+ D+++ G +L+ L + PFE +
Sbjct: 209 TRNTTPMYR--TPEIIDLYSNFPI--GEKQ------DIWALGCILYLLCFRQHPFEDGAK 258
Query: 273 LQ 274
L+
Sbjct: 259 LR 260
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 97
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 156 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 208
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 209 G----YNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 86 IKVLNRGSTSDERAL-LEGRFIREVNMMSRVK-HDNLVKFLGACK-DPLMVIVTELLPGM 142
I V GS S E L ++EV+++ +V H N+++ + + +V +L+
Sbjct: 37 IDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 96
Query: 143 SLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKL 201
L YL + ++ + + L++ A LH I+HRDLKP+N+LL D ++KL
Sbjct: 97 ELFDYLTEKVTLSEKETRKIMRALLEVICA---LHKLNIVHRDLKPENILLD-DDMNIKL 152
Query: 202 ADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
DFG + ++APE+ Y +VD++S G++++ LL
Sbjct: 153 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM--NDNHPGYGKEVDMWSTGVIMYTLL 210
Query: 262 TNRLPF 267
PF
Sbjct: 211 AGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 86 IKVLNRGSTSDERAL-LEGRFIREVNMMSRVK-HDNLVKFLGACK-DPLMVIVTELLPGM 142
I V GS S E L ++EV+++ +V H N+++ + + +V +L+
Sbjct: 50 IDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 109
Query: 143 SLRKYLVS-LRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKL 201
L YL + ++ + + L++ A LH I+HRDLKP+N+LL D ++KL
Sbjct: 110 ELFDYLTEKVTLSEKETRKIMRALLEVICA---LHKLNIVHRDLKPENILLD-DDMNIKL 165
Query: 202 ADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 261
DFG + ++APE+ Y +VD++S G++++ LL
Sbjct: 166 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM--NDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 262 TNRLPF 267
PF
Sbjct: 224 AGSPPF 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 60 LFIGSKIGEGAHGKVYEG------RYG---DRIVAIKVLNRGSTSDERALLEGRFIREVN 110
L +G+G K+++G YG + V +KVL++ + + E +
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-----AS 64
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
MMS++ H +LV G C ++V E + SL YL + N +++ L A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLA 123
Query: 170 RAMDCLHANGIIHRDLKPDNLLLT--PDQKS-----LKLADFGLARXXXXXXXXXXXXXX 222
AM L N +IH ++ N+LL D+K+ +KL+D G++
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---ITVLPKDILQER 180
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
W+ PE K+ N D +SFG LWE+ +
Sbjct: 181 IPWVPPECIEN-------PKNLNLATDKWSFGTTLWEICS 213
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+L+ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 60 LFIGSKIGEGAHGKVYEG------RYG---DRIVAIKVLNRGSTSDERALLEGRFIREVN 110
L +G+G K+++G YG + V +KVL++ + + E +
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-----AS 64
Query: 111 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 169
MMS++ H +LV G C ++V E + SL YL + N +++ L A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLA 123
Query: 170 RAMDCLHANGIIHRDLKPDNLLLT--PDQKS-----LKLADFGLARXXXXXXXXXXXXXX 222
AM L N +IH ++ N+LL D+K+ +KL+D G++
Sbjct: 124 WAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---ITVLPKDILQER 180
Query: 223 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 262
W+ PE K+ N D +SFG LWE+ +
Sbjct: 181 IPWVPPECIEN-------PKNLNLATDKWSFGTTLWEICS 213
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NL++ Q +++ DFG A+ Y +APE+ +
Sbjct: 161 DLIYRDLKPENLIID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPEIIIS----- 212
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
K YN VD ++ G++++E+ PF
Sbjct: 213 ---KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 33/214 (15%)
Query: 66 IGEGAHGKVY------EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G+G GKV GRY A+K+L + ++ + SRV +
Sbjct: 16 LGKGTFGKVILVREKATGRY----YAMKILRK------EVIIAKDEVAHTVTESRVLQNT 65
Query: 120 LVKFLGACKDPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
FL A K + V E G L +L R A + +I A++
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEY 123
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYST 233
LH+ +++RD+K +NL+L D +K+ DFGL + ++APE+
Sbjct: 124 LHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-- 180
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 181 ------EDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 164 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 223
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 224 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
++APE+ E Y VD + G+V++E++ RLPF
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 65 KIGEGAHGKVYEGRY--GDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSR-VKHDNLV 121
++G GA+G V + R+ +I A+K + S E+ R + ++++ R V V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQK----RLLXDLDISXRTVDCPFTV 96
Query: 122 KFLGACKDPLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMDCLHAN- 178
F GA V + L SL K+ + + + + A+ I +A++ LH+
Sbjct: 97 TFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+IHRD+KP N+L+ +K DFG++ + APE + +
Sbjct: 157 SVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP----E 211
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPFE 268
+K Y+ K D++S GI EL R P++
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 66 IGEGAHGKVY------EGRYGDRIVAIKVLNRGS--TSDERALLEGRFIREVNMMSRVKH 117
+G+G GKV GRY A+K+L + DE A + E ++ +H
Sbjct: 13 LGKGTFGKVILVREKATGRY----YAMKILRKEVIIAKDEVA----HTVTESRVLQNTRH 64
Query: 118 DNL--VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
L +K+ D L V E G L +L R A + +I A++ L
Sbjct: 65 PFLTALKYAFQTHDRL-CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYL 121
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTV 234
H+ +++RD+K +NL+L D +K+ DFGL + ++APE+
Sbjct: 122 HSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL--- 177
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 178 -----EDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 66 IGEGAHGK-VYEGRYGDRIVAIK-VLNRGSTSDERALLEGRFIREVNMMSRVKHDNLVKF 123
+G GA G VY G + +R VA+K +L + +R E + +RE + +H N++++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR---EVQLLRESD-----EHPNVIRY 83
Query: 124 LGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHR 183
KD + L +L++Y+ L L + + LH+ I+HR
Sbjct: 84 FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNIVHR 142
Query: 184 DLKPDNLLLTPDQKSLK----LADFGLARXXXXXXXXXXXXXXYR----WMAPELYSTVT 235
DLKP N+L++ K ++DFGL + W+APE+
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM----- 197
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTN 263
L + K++ VD++S G V + +++
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISE 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 66 IGEGAHGKVYEGRYGD--RIVAIKVLNRGSTSD----ERALLEGRFIREVNMMSRVKHDN 119
+G G+ G+V ++ + A+K+L++ E L E R ++ VN
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 120 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 178
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 238
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 239 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
G YN VD ++ G++++++ PF
Sbjct: 214 G----YNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 152
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 213 M-------YDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 33/214 (15%)
Query: 66 IGEGAHGKVY------EGRYGDRIVAIKVLNRGSTSDERALLEGRFIREVNMMSRVKHDN 119
+G+G GKV GRY A+K+L + ++ + SRV +
Sbjct: 13 LGKGTFGKVILVREKATGRY----YAMKILRK------EVIIAKDEVAHTVTESRVLQNT 62
Query: 120 LVKFLGACKDPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 174
FL A K + V E G L +L R A + +I A++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEY 120
Query: 175 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYST 233
LH+ +++RD+K +NL+L D +K+ DFGL + ++APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-- 177
Query: 234 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 178 ------EDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 146
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 207 M-------YDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 66 IGEGAHGKVY------EGRYGDRIVAIKVLNRGS--TSDERALLEGRFIREVNMMSRVKH 117
+G+G GKV GRY A+K+L + DE A + E ++ +H
Sbjct: 18 LGKGTFGKVILVREKATGRY----YAMKILRKEVIIAKDEVA----HTVTESRVLQNTRH 69
Query: 118 DNL--VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
L +K+ D L V E G L +L R A + +I A++ L
Sbjct: 70 PFLTALKYAFQTHDRL-CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYL 126
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTV 234
H+ +++RD+K +NL+L D +K+ DFGL + ++APE+
Sbjct: 127 HSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--- 182
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 183 -----EDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 132 MVIVTELLPGMSLRKYLVSLRPNKLDLHV--ALNFALDIARAMDCLHANGIIHRDLKPDN 189
+ +V ++ G +R ++ ++ + A+ + I ++ LH II+RDLKP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319
Query: 190 LLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 248
+LL D +++++D GLA +MAPEL GE+ Y+ V
Sbjct: 320 VLLD-DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL------GEE--YDFSV 370
Query: 249 DVYSFGIVLWELLTNRLPF 267
D ++ G+ L+E++ R PF
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 146
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 207 M-------YDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 66 IGEGAHGKVY------EGRYGDRIVAIKVLNRGS--TSDERALLEGRFIREVNMMSRVKH 117
+G+G GKV GRY A+K+L + DE A + E ++ +H
Sbjct: 13 LGKGTFGKVILVREKATGRY----YAMKILRKEVIIAKDEVA----HTVTESRVLQNTRH 64
Query: 118 DNL--VKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
L +K+ D L V E G L +L R A + +I A++ L
Sbjct: 65 PFLTALKYAFQTHDRL-CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYL 121
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTV 234
H+ +++RD+K +NL+L D +K+ DFGL + ++APE+
Sbjct: 122 HSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--- 177
Query: 235 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 178 -----EDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 66 IGEGAHGKV--YEGRYGDRIVAIKVLNRGS--TSDERA--LLEGRFIREVNMMSRVKHDN 119
+G+G GKV + + R A+K+L + DE A L E R ++ SR
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN----SRHPFLT 211
Query: 120 LVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN- 178
+K+ D L V E G L +L R D A + +I A+D LH+
Sbjct: 212 ALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDR--ARFYGAEIVSALDYLHSEK 268
Query: 179 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLR 237
+++RDLK +NL+L D +K+ DFGL + ++APE+
Sbjct: 269 NVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL------ 321
Query: 238 QGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
E Y VD + G+V++E++ RLPF
Sbjct: 322 --EDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 119 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 175
N++ KDP+ +V E + ++ +L + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-----YMYEILKALDYC 147
Query: 176 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 235
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 236 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 267
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 53 LLVDPKLLFIGSKIGEGAHGKV--YEGRYGDRIVAIK-VLNRGSTSDERALLEGRFIREV 109
+++D K K+GEG V EG + A+K +L E A RE
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ------REA 77
Query: 110 NMMSRVKHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRP--NKLDLHVA 161
+M H N+++ + C K +++ G +L + L+ N L
Sbjct: 78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRG-TLWNEIERLKDKGNFLTEDQI 136
Query: 162 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL----------ARXXX 211
L L I R ++ +HA G HRDLKP N+LL D+ L D G +R
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLG-DEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 212 XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH--YNNKVDVYSFGIVLWELLTNRLPFEG 269
+ APEL+S + H + + DV+S G VL+ ++ P++
Sbjct: 196 TLQDWAAQRCTISYRAPELFSV-------QSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
Query: 270 MSNLQAAYAAAFKVQESIYAP 290
+ Q + A VQ + P
Sbjct: 249 V--FQKGDSVALAVQNQLSIP 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,859,730
Number of Sequences: 62578
Number of extensions: 299603
Number of successful extensions: 3742
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 658
Number of HSP's gapped (non-prelim): 1137
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)