Query 022904
Match_columns 290
No_of_seqs 108 out of 1191
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 13:04:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022904.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022904hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 9.6E-54 3.3E-58 385.9 24.2 252 3-273 52-311 (312)
2 3n2t_A Putative oxidoreductase 100.0 5E-53 1.7E-57 386.4 26.0 260 3-288 69-341 (348)
3 3eau_A Voltage-gated potassium 100.0 7.4E-53 2.5E-57 382.5 26.2 259 3-273 50-323 (327)
4 1pz1_A GSP69, general stress p 100.0 5.3E-53 1.8E-57 384.2 25.1 254 3-274 51-313 (333)
5 3n6q_A YGHZ aldo-keto reductas 100.0 2.3E-52 7.7E-57 382.0 28.2 267 3-280 60-340 (346)
6 3lut_A Voltage-gated potassium 100.0 2.5E-52 8.4E-57 384.5 26.5 259 3-273 84-357 (367)
7 3erp_A Putative oxidoreductase 100.0 5.8E-52 2E-56 380.1 28.6 256 3-271 81-349 (353)
8 1gve_A Aflatoxin B1 aldehyde r 100.0 3.2E-52 1.1E-56 378.2 25.8 272 3-289 39-327 (327)
9 1lqa_A TAS protein; TIM barrel 100.0 2.9E-51 1E-55 374.6 28.9 257 3-275 47-342 (346)
10 1ur3_M Hypothetical oxidoreduc 100.0 1.5E-51 5.3E-56 372.2 25.0 233 3-273 70-315 (319)
11 3v0s_A Perakine reductase; AKR 100.0 1.9E-52 6.6E-57 381.1 19.3 251 3-273 51-311 (337)
12 2bp1_A Aflatoxin B1 aldehyde r 100.0 2.6E-51 9.1E-56 376.6 25.8 264 3-274 72-351 (360)
13 1ynp_A Oxidoreductase, AKR11C1 100.0 4.3E-51 1.5E-55 369.1 21.8 236 3-273 65-309 (317)
14 3up8_A Putative 2,5-diketo-D-g 100.0 1E-50 3.6E-55 363.0 22.6 219 3-274 64-283 (298)
15 3f7j_A YVGN protein; aldo-keto 100.0 3.8E-49 1.3E-53 349.8 22.7 216 3-273 48-264 (276)
16 4f40_A Prostaglandin F2-alpha 100.0 3.1E-49 1.1E-53 352.5 22.0 217 3-272 52-275 (288)
17 3o0k_A Aldo/keto reductase; ss 100.0 1.4E-49 4.6E-54 353.6 19.5 215 3-270 67-282 (283)
18 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.2E-48 4E-53 354.6 24.1 232 3-274 52-306 (326)
19 2wzm_A Aldo-keto reductase; ox 100.0 4.9E-49 1.7E-53 350.1 20.9 218 3-273 52-270 (283)
20 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 8.5E-49 2.9E-53 355.1 22.8 231 3-274 49-303 (323)
21 3b3e_A YVGN protein; aldo-keto 100.0 6.5E-49 2.2E-53 353.2 21.4 216 3-273 82-298 (310)
22 3ln3_A Dihydrodiol dehydrogena 100.0 1.1E-48 3.9E-53 354.5 23.1 231 3-274 50-304 (324)
23 1qwk_A Aldose reductase, aldo- 100.0 5.2E-49 1.8E-53 355.6 20.7 239 3-274 46-296 (317)
24 1hw6_A 2,5-diketo-D-gluconic a 100.0 1.1E-48 3.6E-53 347.3 21.9 220 3-273 44-264 (278)
25 1us0_A Aldose reductase; oxido 100.0 1.9E-48 6.4E-53 351.9 23.8 230 3-273 43-295 (316)
26 3o3r_A Aldo-keto reductase fam 100.0 2.2E-48 7.4E-53 351.4 24.1 232 3-276 43-298 (316)
27 1s1p_A Aldo-keto reductase fam 100.0 2E-48 6.9E-53 353.7 23.8 231 3-273 49-302 (331)
28 1vbj_A Prostaglandin F synthas 100.0 2E-48 7E-53 345.8 21.6 216 3-273 51-267 (281)
29 1zgd_A Chalcone reductase; pol 100.0 1.6E-48 5.5E-53 351.6 20.9 225 3-273 52-295 (312)
30 3krb_A Aldose reductase; ssgci 100.0 2.4E-48 8.2E-53 353.5 22.0 232 3-274 55-317 (334)
31 1mi3_A Xylose reductase, XR; a 100.0 4.8E-48 1.6E-52 350.1 22.3 234 3-273 46-306 (322)
32 1vp5_A 2,5-diketo-D-gluconic a 100.0 6.3E-48 2.2E-52 345.0 22.4 219 3-273 56-277 (298)
33 4gie_A Prostaglandin F synthas 100.0 5.8E-48 2E-52 344.5 21.1 219 3-273 55-274 (290)
34 3h7u_A Aldo-keto reductase; st 100.0 7.7E-48 2.6E-52 350.2 21.7 226 3-273 66-308 (335)
35 3h7r_A Aldo-keto reductase; st 100.0 4.9E-48 1.7E-52 350.9 19.8 226 3-273 62-304 (331)
36 1mzr_A 2,5-diketo-D-gluconate 100.0 8E-48 2.7E-52 344.0 20.1 217 3-273 66-284 (296)
37 2bgs_A Aldose reductase; holoe 100.0 1.7E-47 5.8E-52 348.7 21.5 222 3-274 78-316 (344)
38 3b3d_A YTBE protein, putative 100.0 3.5E-47 1.2E-51 343.0 21.4 218 3-273 82-302 (314)
39 4gac_A Alcohol dehydrogenase [ 100.0 3.7E-47 1.2E-51 344.5 20.2 231 3-275 43-296 (324)
40 4exb_A Putative uncharacterize 100.0 1.6E-46 5.5E-51 335.3 14.6 197 3-262 87-292 (292)
41 3cf4_A Acetyl-COA decarboxylas 98.2 7.6E-07 2.6E-11 88.7 5.5 99 56-162 231-351 (807)
42 3pdi_B Nitrogenase MOFE cofact 81.5 32 0.0011 31.6 13.9 101 15-118 77-194 (458)
43 1ydn_A Hydroxymethylglutaryl-C 81.5 4.7 0.00016 34.8 7.8 104 47-155 23-140 (295)
44 2ftp_A Hydroxymethylglutaryl-C 78.7 23 0.00078 30.5 11.4 106 46-154 26-143 (302)
45 1eye_A DHPS 1, dihydropteroate 74.9 34 0.0012 29.3 11.1 99 48-155 27-131 (280)
46 4djd_D C/Fe-SP, corrinoid/iron 73.0 12 0.00042 32.8 7.9 100 51-156 81-188 (323)
47 1uwk_A Urocanate hydratase; hy 68.1 37 0.0013 31.5 10.1 103 12-130 148-268 (557)
48 2fkn_A Urocanate hydratase; ro 67.3 38 0.0013 31.4 10.0 103 12-130 144-264 (552)
49 1x87_A Urocanase protein; stru 66.4 37 0.0013 31.5 9.7 103 12-130 143-263 (551)
50 1wv2_A Thiazole moeity, thiazo 66.0 61 0.0021 27.4 11.0 106 45-153 82-192 (265)
51 2xdq_B Light-independent proto 64.2 83 0.0028 29.2 12.2 139 14-158 72-251 (511)
52 1aj0_A DHPS, dihydropteroate s 61.8 48 0.0017 28.3 9.3 99 48-155 36-140 (282)
53 3aek_B Light-independent proto 61.2 17 0.00057 34.2 6.8 143 7-158 63-238 (525)
54 1nvm_A HOA, 4-hydroxy-2-oxoval 59.9 20 0.0007 31.5 6.8 105 46-154 26-139 (345)
55 2yci_X 5-methyltetrahydrofolat 59.8 80 0.0027 26.7 13.3 97 48-156 32-133 (271)
56 2nql_A AGR_PAT_674P, isomerase 58.7 51 0.0018 29.3 9.4 111 33-159 208-320 (388)
57 1ydo_A HMG-COA lyase; TIM-barr 58.1 23 0.0008 30.6 6.8 105 47-154 25-141 (307)
58 1tx2_A DHPS, dihydropteroate s 57.8 48 0.0016 28.6 8.6 100 49-156 62-167 (297)
59 3ihk_A Thiamin pyrophosphokina 55.6 68 0.0023 26.1 8.9 41 216-256 72-113 (218)
60 1kko_A 3-methylaspartate ammon 55.2 1.2E+02 0.004 27.3 13.1 106 47-157 249-361 (413)
61 3gd6_A Muconate cycloisomerase 54.5 53 0.0018 29.3 8.8 72 87-160 229-301 (391)
62 1mdl_A Mandelate racemase; iso 54.2 54 0.0018 28.7 8.7 97 47-155 200-298 (359)
63 2pgw_A Muconate cycloisomerase 54.0 68 0.0023 28.4 9.4 70 87-157 230-301 (384)
64 3ec1_A YQEH GTPase; atnos1, at 53.5 73 0.0025 28.1 9.5 85 30-116 98-182 (369)
65 3k13_A 5-methyltetrahydrofolat 53.4 90 0.0031 26.9 9.7 104 48-160 35-145 (300)
66 2cw6_A Hydroxymethylglutaryl-C 52.8 24 0.00083 30.3 6.0 106 46-154 23-140 (298)
67 1nu5_A Chloromuconate cycloiso 51.5 73 0.0025 27.9 9.2 72 87-159 228-301 (370)
68 1wa3_A 2-keto-3-deoxy-6-phosph 51.1 71 0.0024 25.2 8.3 88 48-153 20-109 (205)
69 2o56_A Putative mandelate race 51.0 76 0.0026 28.3 9.3 110 33-157 215-326 (407)
70 3fst_A 5,10-methylenetetrahydr 50.2 1.2E+02 0.0042 26.0 10.9 98 46-150 93-204 (304)
71 2og9_A Mandelate racemase/muco 50.2 68 0.0023 28.5 8.8 99 47-157 218-318 (393)
72 3mel_A Thiamin pyrophosphokina 49.9 87 0.003 25.6 8.7 41 216-256 76-117 (222)
73 2vp8_A Dihydropteroate synthas 49.5 53 0.0018 28.6 7.6 99 48-155 63-167 (318)
74 3tr9_A Dihydropteroate synthas 49.4 1.2E+02 0.0043 26.2 9.9 100 48-155 47-155 (314)
75 3s5s_A Mandelate racemase/muco 49.3 60 0.002 29.0 8.2 87 67-160 215-303 (389)
76 2qgy_A Enolase from the enviro 48.7 1E+02 0.0035 27.3 9.7 98 47-156 205-304 (391)
77 3u7q_B Nitrogenase molybdenum- 48.5 78 0.0027 29.6 9.1 105 15-122 128-251 (523)
78 2poz_A Putative dehydratase; o 48.2 66 0.0022 28.6 8.3 111 32-157 198-310 (392)
79 2ovl_A Putative racemase; stru 47.4 78 0.0027 27.8 8.6 99 47-157 202-302 (371)
80 3h2y_A GTPase family protein; 47.4 1.3E+02 0.0044 26.5 10.0 85 30-116 96-180 (368)
81 2y5s_A DHPS, dihydropteroate s 46.1 42 0.0014 28.9 6.4 100 48-156 44-148 (294)
82 2pp0_A L-talarate/galactarate 45.7 85 0.0029 27.9 8.7 70 87-157 260-331 (398)
83 2dqw_A Dihydropteroate synthas 45.4 1E+02 0.0036 26.4 8.8 97 49-155 51-153 (294)
84 3ik4_A Mandelate racemase/muco 45.3 66 0.0023 28.3 7.8 86 68-160 215-302 (365)
85 2qde_A Mandelate racemase/muco 44.7 84 0.0029 27.9 8.5 73 87-160 229-303 (397)
86 2akz_A Gamma enolase, neural; 44.6 1.8E+02 0.0062 26.4 11.1 95 48-153 271-368 (439)
87 2zad_A Muconate cycloisomerase 44.3 77 0.0026 27.5 8.0 103 47-159 193-296 (345)
88 3apt_A Methylenetetrahydrofola 43.9 1.6E+02 0.0053 25.4 14.2 99 46-150 82-201 (310)
89 2xvc_A ESCRT-III, SSO0910; cel 43.9 15 0.00053 23.4 2.3 19 83-101 39-57 (59)
90 3u9i_A Mandelate racemase/muco 43.7 81 0.0028 28.1 8.2 86 68-160 245-332 (393)
91 3q45_A Mandelate racemase/muco 43.0 68 0.0023 28.3 7.5 72 87-159 224-297 (368)
92 4h1z_A Enolase Q92ZS5; dehydra 43.0 1.1E+02 0.0036 27.5 8.9 87 68-160 258-345 (412)
93 1mio_B Nitrogenase molybdenum 42.3 2E+02 0.0067 26.1 12.8 106 14-123 80-199 (458)
94 2h9a_B CO dehydrogenase/acetyl 42.1 1.2E+02 0.0041 26.2 8.7 98 51-156 75-181 (310)
95 3dg3_A Muconate cycloisomerase 41.8 54 0.0019 28.9 6.7 72 87-160 225-298 (367)
96 2ox4_A Putative mandelate race 41.7 73 0.0025 28.3 7.6 111 32-157 208-320 (403)
97 2qq6_A Mandelate racemase/muco 41.5 1.1E+02 0.0036 27.4 8.7 111 32-157 209-321 (410)
98 3aek_A Light-independent proto 41.3 2E+02 0.0068 25.9 11.7 137 14-157 98-260 (437)
99 3l8m_A Probable thiamine pyrop 41.0 37 0.0013 27.6 5.0 41 216-256 74-114 (212)
100 2q5c_A NTRC family transcripti 40.9 71 0.0024 25.5 6.7 65 83-153 80-147 (196)
101 3i4k_A Muconate lactonizing en 40.4 77 0.0026 28.1 7.5 96 55-161 212-309 (383)
102 4hb7_A Dihydropteroate synthas 40.0 1.2E+02 0.004 25.8 8.0 100 48-155 28-132 (270)
103 3u7q_A Nitrogenase molybdenum- 39.7 2.3E+02 0.0078 26.1 14.0 138 14-157 127-300 (492)
104 1sjd_A N-acylamino acid racema 39.3 99 0.0034 27.0 8.0 98 47-157 194-293 (368)
105 3lqv_P Splicing factor 3B subu 39.0 34 0.0012 19.9 3.1 24 244-267 3-31 (39)
106 1nsj_A PRAI, phosphoribosyl an 38.9 72 0.0025 25.7 6.4 73 48-129 11-84 (205)
107 2p8b_A Mandelate racemase/muco 38.9 67 0.0023 28.2 6.8 70 87-157 226-297 (369)
108 3mwc_A Mandelate racemase/muco 38.2 1E+02 0.0035 27.5 7.9 91 58-159 225-317 (400)
109 3p6l_A Sugar phosphate isomera 37.9 1.3E+02 0.0043 24.4 8.1 108 34-157 12-136 (262)
110 3dxi_A Putative aldolase; TIM 37.6 2E+02 0.0069 24.9 9.5 108 46-154 20-133 (320)
111 2hzg_A Mandelate racemase/muco 37.3 1.2E+02 0.004 27.0 8.2 67 87-154 235-304 (401)
112 2oz8_A MLL7089 protein; struct 37.2 1.9E+02 0.0063 25.6 9.5 95 46-154 200-296 (389)
113 1qgu_B Protein (nitrogenase mo 35.9 2.2E+02 0.0074 26.4 10.0 107 14-123 125-248 (519)
114 3ks6_A Glycerophosphoryl diest 35.1 72 0.0025 26.3 6.0 19 137-155 193-211 (250)
115 3bjs_A Mandelate racemase/muco 35.1 1.4E+02 0.0048 26.9 8.4 67 87-154 269-338 (428)
116 3pdi_A Nitrogenase MOFE cofact 34.9 1.5E+02 0.0051 27.3 8.6 104 12-121 104-231 (483)
117 3rfa_A Ribosomal RNA large sub 34.6 2.4E+02 0.0081 25.3 9.7 89 71-159 232-349 (404)
118 3jva_A Dipeptide epimerase; en 34.3 2E+02 0.0068 25.0 9.1 84 68-157 209-294 (354)
119 1r0m_A N-acylamino acid racema 34.2 74 0.0025 28.0 6.3 68 87-155 228-297 (375)
120 3ijw_A Aminoglycoside N3-acety 34.0 53 0.0018 27.9 5.0 51 53-103 17-72 (268)
121 2chr_A Chloromuconate cycloiso 33.8 91 0.0031 27.3 6.8 140 8-160 137-302 (370)
122 3k94_A Thiamin pyrophosphokina 33.6 49 0.0017 27.2 4.6 40 216-255 77-116 (223)
123 1mio_A Nitrogenase molybdenum 33.3 3E+02 0.01 25.6 12.4 139 14-158 118-287 (533)
124 2al1_A Enolase 1, 2-phospho-D- 33.2 2.7E+02 0.0094 25.1 10.5 95 48-153 274-371 (436)
125 2p0o_A Hypothetical protein DU 33.0 2.6E+02 0.0089 24.8 11.5 149 58-253 73-236 (372)
126 2hxt_A L-fuconate dehydratase; 32.1 1.1E+02 0.0039 27.5 7.3 67 87-154 282-351 (441)
127 3guv_A Site-specific recombina 32.1 45 0.0015 25.6 4.0 50 55-105 61-112 (167)
128 3lm8_A Thiamine pyrophosphokin 31.9 44 0.0015 27.4 4.1 40 216-255 78-117 (222)
129 3fcp_A L-Ala-D/L-Glu epimerase 31.6 1.8E+02 0.006 25.7 8.4 101 53-161 206-308 (381)
130 4f3h_A Fimxeal, putative uncha 31.1 75 0.0026 25.9 5.5 117 32-155 93-220 (250)
131 1v5x_A PRA isomerase, phosphor 31.1 1.1E+02 0.0037 24.6 6.3 74 48-130 10-84 (203)
132 3my9_A Muconate cycloisomerase 30.9 87 0.003 27.7 6.2 72 87-159 231-304 (377)
133 2i5g_A Amidohydrolase; NYSGXRC 30.5 2.7E+02 0.0091 24.1 9.5 87 58-148 106-205 (325)
134 2nyg_A YOKD protein; PFAM02522 30.5 71 0.0024 27.2 5.2 48 53-100 15-67 (273)
135 3l12_A Putative glycerophospho 30.3 1.3E+02 0.0043 25.7 7.0 19 137-155 257-275 (313)
136 4fb5_A Probable oxidoreductase 29.9 42 0.0015 29.2 3.9 69 206-276 68-146 (393)
137 3dip_A Enolase; structural gen 29.5 2E+02 0.0067 25.7 8.3 91 55-156 231-324 (410)
138 4hv0_A AVTR; ribbon-helix-heli 29.3 76 0.0026 22.6 4.2 28 203-230 8-35 (106)
139 1f6y_A 5-methyltetrahydrofolat 29.2 2.5E+02 0.0085 23.4 13.5 100 48-156 23-124 (262)
140 3i6e_A Muconate cycloisomerase 29.2 1.1E+02 0.0036 27.2 6.4 72 87-159 232-305 (385)
141 1v0l_A Endo-1,4-beta-xylanase 29.0 64 0.0022 27.9 4.8 73 83-157 182-269 (313)
142 2zc8_A N-acylamino acid racema 28.8 92 0.0031 27.3 5.9 68 87-155 221-290 (369)
143 3p3b_A Mandelate racemase/muco 28.7 91 0.0031 27.7 5.9 78 68-154 227-311 (392)
144 3fv9_G Mandelate racemase/muco 28.6 1.8E+02 0.0063 25.6 7.9 71 88-159 233-305 (386)
145 2keb_A DNA polymerase subunit 28.5 1.1E+02 0.0039 21.6 5.1 45 182-227 25-69 (101)
146 3lmz_A Putative sugar isomeras 28.4 1.8E+02 0.0063 23.4 7.5 91 58-157 37-134 (257)
147 3sma_A FRBF; N-acetyl transfer 28.3 66 0.0023 27.6 4.6 54 52-105 23-81 (286)
148 3obe_A Sugar phosphate isomera 28.3 2.5E+02 0.0085 23.5 8.6 17 138-154 117-133 (305)
149 1kcz_A Beta-methylaspartase; b 28.2 2.9E+02 0.0099 24.5 9.3 82 72-155 271-359 (413)
150 3mcm_A 2-amino-4-hydroxy-6-hyd 28.0 2E+02 0.0068 26.3 8.0 103 47-155 209-322 (442)
151 4djd_C C/Fe-SP, corrinoid/iron 27.7 3.5E+02 0.012 24.6 10.2 100 48-156 103-209 (446)
152 1chr_A Chloromuconate cycloiso 27.7 2.6E+02 0.009 24.3 8.8 88 68-161 214-303 (370)
153 3lmz_A Putative sugar isomeras 27.7 2.3E+02 0.0077 22.8 8.0 64 32-104 45-108 (257)
154 3v7e_A Ribosome-associated pro 27.6 1.1E+02 0.0037 20.6 4.9 57 90-155 3-60 (82)
155 3mz2_A Glycerophosphoryl diest 27.6 1.2E+02 0.0042 25.7 6.3 66 90-155 148-235 (292)
156 1q7z_A 5-methyltetrahydrofolat 27.5 2.7E+02 0.0094 26.1 9.2 95 49-155 339-438 (566)
157 1vp8_A Hypothetical protein AF 26.7 2.5E+02 0.0085 22.6 7.4 86 70-157 17-107 (201)
158 3h87_C Putative uncharacterize 26.5 1.5E+02 0.005 19.8 5.8 57 203-265 12-69 (73)
159 2omk_A Hypothetical protein; s 26.4 98 0.0033 25.5 5.3 40 216-255 104-143 (231)
160 3s83_A Ggdef family protein; s 26.4 2.6E+02 0.0088 22.6 8.1 116 33-155 90-216 (259)
161 2vef_A Dihydropteroate synthas 26.3 2.7E+02 0.0094 23.9 8.4 101 48-155 31-136 (314)
162 3ekg_A Mandelate racemase/muco 26.1 2.1E+02 0.0073 25.6 7.9 82 68-155 236-321 (404)
163 4ggi_A UDP-2,3-diacylglucosami 26.0 96 0.0033 26.3 5.3 46 109-156 234-279 (283)
164 4had_A Probable oxidoreductase 26.0 38 0.0013 29.3 2.8 67 206-274 60-136 (350)
165 2pa6_A Enolase; glycolysis, ly 25.9 3.6E+02 0.012 24.1 9.7 95 48-153 268-365 (427)
166 1y14_A B32, RPB4, DNA-directed 25.8 2.5E+02 0.0085 22.3 7.2 53 213-277 134-186 (187)
167 3jx9_A Putative phosphoheptose 25.2 80 0.0027 24.7 4.3 39 64-106 74-112 (170)
168 1wuf_A Hypothetical protein LI 25.2 1.3E+02 0.0045 26.7 6.3 86 68-159 227-314 (393)
169 2p3z_A L-rhamnonate dehydratas 24.7 2.2E+02 0.0077 25.5 7.8 97 47-156 233-333 (415)
170 2d1z_A Endo-1,4-beta-D-xylanas 24.5 1.2E+02 0.0041 27.3 6.0 104 49-157 148-269 (436)
171 1k77_A EC1530, hypothetical pr 24.3 2.5E+02 0.0086 22.4 7.6 18 138-155 88-105 (260)
172 4e38_A Keto-hydroxyglutarate-a 24.1 2.6E+02 0.0088 23.0 7.4 85 49-153 45-132 (232)
173 2qdd_A Mandelate racemase/muco 23.9 2.1E+02 0.007 25.1 7.3 72 87-159 226-299 (378)
174 3tj4_A Mandelate racemase; eno 23.9 2.6E+02 0.0091 24.4 8.1 82 68-155 223-306 (372)
175 2r6o_A Putative diguanylate cy 23.7 3.2E+02 0.011 22.9 8.3 117 32-155 113-240 (294)
176 3no3_A Glycerophosphodiester p 23.6 1.1E+02 0.0036 25.1 5.0 18 138-155 186-203 (238)
177 3ta6_A Triosephosphate isomera 23.6 1.6E+02 0.0054 24.9 6.1 46 216-261 216-262 (267)
178 3dgb_A Muconate cycloisomerase 23.5 97 0.0033 27.4 5.1 96 55-161 212-309 (382)
179 3qp1_A CVIR transcriptional re 23.4 2.5E+02 0.0087 21.5 7.6 87 47-149 30-130 (182)
180 2ewt_A BLDD, putative DNA-bind 23.4 61 0.0021 20.3 2.8 22 204-225 9-30 (71)
181 3g13_A Putative conjugative tr 23.3 32 0.0011 26.5 1.7 48 55-103 63-110 (169)
182 1obo_A Flavodoxin; electron tr 23.2 2E+02 0.0067 21.5 6.3 67 5-71 53-120 (169)
183 3eyp_A Putative alpha-L-fucosi 23.2 2.1E+02 0.007 26.3 7.3 20 137-156 106-125 (469)
184 3ix3_A Transcriptional activat 23.1 1.8E+02 0.0062 22.0 6.1 81 48-149 15-110 (173)
185 3cq9_A Uncharacterized protein 23.0 89 0.003 25.6 4.4 41 216-256 77-118 (227)
186 3f6r_A Flavodoxin; FMN binding 22.9 1.7E+02 0.0059 21.3 5.8 86 5-94 56-145 (148)
187 3t6c_A RSPA, putative MAND fam 22.9 4E+02 0.014 24.0 9.2 111 32-157 239-351 (440)
188 3ddm_A Putative mandelate race 22.8 1.9E+02 0.0064 25.7 6.9 95 55-161 217-314 (392)
189 1dw9_A Cyanate lyase; cyanate 22.6 29 0.00099 27.0 1.2 63 206-270 16-78 (156)
190 1v77_A PH1877P, hypothetical p 22.6 2.9E+02 0.01 21.9 12.8 76 68-153 76-165 (212)
191 2c4w_A 3-dehydroquinate dehydr 22.5 2.1E+02 0.0071 22.5 6.1 81 46-135 33-118 (176)
192 1y7y_A C.AHDI; helix-turn-heli 22.5 65 0.0022 20.2 2.9 24 203-226 13-36 (74)
193 3lab_A Putative KDPG (2-keto-3 22.3 2.1E+02 0.0071 23.3 6.4 87 49-153 24-117 (217)
194 2a6c_A Helix-turn-helix motif; 22.2 76 0.0026 20.9 3.2 25 202-226 17-41 (83)
195 3u0h_A Xylose isomerase domain 22.2 1.7E+02 0.0057 23.8 6.1 16 138-153 87-102 (281)
196 4hjf_A Ggdef family protein; s 21.9 1.9E+02 0.0066 24.9 6.6 117 31-154 161-288 (340)
197 3qld_A Mandelate racemase/muco 21.9 1.2E+02 0.0041 26.9 5.4 86 68-159 215-302 (388)
198 2ixd_A LMBE-related protein; h 21.8 3.3E+02 0.011 22.2 9.3 74 18-94 20-93 (242)
199 3v5c_A Mandelate racemase/muco 21.7 3.3E+02 0.011 24.1 8.2 81 68-156 227-313 (392)
200 1n82_A Xylanase, intra-cellula 21.5 2.1E+02 0.0073 24.6 6.8 74 84-157 188-294 (331)
201 1qtq_A GLNRS, protein (glutami 21.5 1.9E+02 0.0064 27.3 6.7 61 48-116 73-133 (553)
202 2chr_A Chloromuconate cycloiso 21.5 4E+02 0.014 23.0 13.9 126 19-157 117-248 (370)
203 3emz_A Xylanase, endo-1,4-beta 21.4 2.5E+02 0.0085 24.3 7.2 76 84-159 187-295 (331)
204 2gwg_A 4-oxalomesaconate hydra 21.1 3.8E+02 0.013 22.7 9.2 71 85-156 91-180 (350)
205 4hde_A SCO1/SENC family lipopr 21.1 1.2E+02 0.0042 23.0 4.7 51 68-118 37-92 (170)
206 3en0_A Cyanophycinase; serine 21.0 2.1E+02 0.007 24.4 6.4 71 30-105 55-152 (291)
207 2ztj_A Homocitrate synthase; ( 20.9 4.3E+02 0.015 23.2 9.4 100 46-153 21-134 (382)
208 1ta3_B Endo-1,4-beta-xylanase; 20.7 3.3E+02 0.011 23.1 7.8 103 50-157 150-271 (303)
209 4e2i_2 DNA polymerase alpha su 20.6 1.4E+02 0.0048 20.2 4.1 33 243-275 3-35 (78)
210 2cpg_A REPA protein, transcrip 20.5 1.3E+02 0.0044 17.1 4.0 24 203-226 12-35 (45)
211 3sbf_A Mandelate racemase / mu 20.4 1.9E+02 0.0065 25.7 6.4 91 55-156 219-311 (401)
212 3l9c_A 3-dehydroquinate dehydr 20.4 3.7E+02 0.013 22.3 9.6 27 46-72 105-131 (259)
213 4a35_A Mitochondrial enolase s 20.4 3.6E+02 0.012 24.3 8.4 81 69-155 272-357 (441)
214 1i1w_A Endo-1,4-beta-xylanase; 20.4 3.2E+02 0.011 23.1 7.6 73 83-157 184-270 (303)
215 1a6f_A RNAse P protein, ribonu 20.3 1.9E+02 0.0065 20.9 5.3 62 31-96 45-109 (119)
216 1qwg_A PSL synthase;, (2R)-pho 20.2 3.8E+02 0.013 22.3 8.2 96 54-153 26-132 (251)
217 2pju_A Propionate catabolism o 20.2 1E+02 0.0035 25.2 4.2 65 83-153 92-159 (225)
218 3vni_A Xylose isomerase domain 20.1 77 0.0026 26.3 3.5 20 138-157 50-70 (294)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=9.6e-54 Score=385.90 Aligned_cols=252 Identities=20% Similarity=0.333 Sum_probs=214.3
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC------CCCCHHHHHHHHHHHHhhhCCCcccEEEEecC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 76 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p 76 (290)
.|||+.||.|.||+.||++++. .+|+++||+||++..+ .+.+++.+++++++||++||+||||+|+||||
T Consensus 52 ~DTA~~Yg~G~sE~~lG~al~~----~~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p 127 (312)
T 1pyf_A 52 LDTAYIYGIGRSEELIGEVLRE----FNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFP 127 (312)
T ss_dssp EECCTTTTTTHHHHHHHHHHTT----SCGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSC
T ss_pred EECccccCCCchHHHHHHHhhh----cCCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 5899999999999999975543 2799999999975211 35789999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 77 DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+...+ .+++|++|++|+++||||+||||||+++++.++++ ..+|+++|++||++++..+.+++++|+++||++++|+|
T Consensus 128 ~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~-~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~sp 205 (312)
T 1pyf_A 128 DEHTP-KDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANK-DGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFP 205 (312)
T ss_dssp CSSSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTT-TSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEEST
T ss_pred CCCCC-HHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHh-hCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecc
Confidence 98877 79999999999999999999999999999999987 46799999999999998877899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCc--hhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcc
Q 022904 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~ 234 (290)
|++|+|++++.... .+...+ ++....+|..+ +......+.+.++|+++|+|++|+||+|++++|.|.
T Consensus 206 L~~G~L~~~~~~~~---~~~~~~--------~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~ 274 (312)
T 1pyf_A 206 LVSGLLAGKYTEDT---TFPEGD--------LRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEID 274 (312)
T ss_dssp TTTTGGGTCCCTTC---CCCTTC--------GGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCC
T ss_pred cccccccCCCCCCC---CCCCcc--------cccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCe
Confidence 99999998875431 111111 11111222211 112344578999999999999999999999999999
Q ss_pred eeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 235 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 235 ~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
++|+|++ +++||++|+++++++||+++++.|+++..+
T Consensus 275 ~~I~g~~--~~~~l~en~~a~~~~L~~~~~~~l~~~~~~ 311 (312)
T 1pyf_A 275 ILIPGAK--RADQLIDNIKTADVTLSQEDISFIDKLFAP 311 (312)
T ss_dssp CBCCCCS--SHHHHHHHHGGGGCCCCHHHHHHHHHHTCC
T ss_pred EEEeCCC--CHHHHHHHHhhccCCCCHHHHHHHHHHhcC
Confidence 9999999 999999999999999999999999998643
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=5e-53 Score=386.45 Aligned_cols=260 Identities=20% Similarity=0.338 Sum_probs=220.9
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC-----------CCCCHHHHHHHHHHHHhhhCCCcccEE
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP-----------VKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~-----------~~~~~~~i~~~~~~SL~~Lg~d~iDl~ 71 (290)
.|||+.||.|.||+.||++++ ++|+++||+||++..+ .+.+++.+++++++||++||+||||||
T Consensus 69 ~DTA~~Yg~G~sE~~lG~al~-----~~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~ 143 (348)
T 3n2t_A 69 IDTAPVYGFGHSEEIVGRALA-----EKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLE 143 (348)
T ss_dssp EECCTTGGGGHHHHHHHHHHH-----HSCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred EEChhhcCCChHHHHHHHHHh-----hCCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 589999999999999997664 2799999999995321 136899999999999999999999999
Q ss_pred EEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeE
Q 022904 72 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 151 (290)
Q Consensus 72 ~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v 151 (290)
+||||+...+ .+++|++|++|+++||||+||||||++++++++++. .+|+++|++||++++..+.+++++|+++||++
T Consensus 144 ~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v 221 (348)
T 3n2t_A 144 QIHWPDDKTP-IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREV-APLATIQPPLNLFERTIEKDILPYAEKHNAVV 221 (348)
T ss_dssp EESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH-SCCCEEECBCBTTBCGGGGTHHHHHHHHTCEE
T ss_pred EecCCCCCCC-HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHh-CCccEEEeeecCccCchHHHHHHHHHHcCCeE
Confidence 9999999888 899999999999999999999999999999999985 47999999999999988889999999999999
Q ss_pred EeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCc--hhHHHHHHHHHHHHHHcCCChHHHHHHHHHh
Q 022904 152 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRYILD 229 (290)
Q Consensus 152 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~g~s~~~~al~~~l~ 229 (290)
++|+||++|+|++++.... ++...+. +.....|..+ +...+..+.+.++|+++|+|++|+||+|+++
T Consensus 222 ~a~spL~~G~Ltg~~~~~~---~~~~~~~--------r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~ 290 (348)
T 3n2t_A 222 LAYGALCRGLLTGKMNRDT---TFPKDDL--------RSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLD 290 (348)
T ss_dssp EEBCTTGGGGGGTCCCTTC---CCCTTSG--------GGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHT
T ss_pred EEeecccCccccCCccCCC---CCCCcch--------hhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999887642 1111111 1111122222 2234556899999999999999999999999
Q ss_pred CCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCCCCccCCCcccc
Q 022904 230 QPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDLLGVIGDCGDEY 288 (290)
Q Consensus 230 ~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 288 (290)
+ +|+++|+|++ +++||++|+++++++||+++++.|+++.++... .+.|+.|
T Consensus 291 ~-~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~-----~~~g~~~ 341 (348)
T 3n2t_A 291 Q-GPVIALWGAR--KPGQVSGVKDVFGWSLTDEEKKAVDDILARHVP-----NPIDPTF 341 (348)
T ss_dssp T-TTEEEEEECS--SGGGGTTHHHHSSCCCCHHHHHHHHHHHHHHSC-----CCCCSSC
T ss_pred C-CCcEEEeCCC--CHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-----CCCCccc
Confidence 9 8889999999 999999999999999999999999999986532 3555555
No 3
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=7.4e-53 Score=382.46 Aligned_cols=259 Identities=18% Similarity=0.250 Sum_probs=215.5
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCC-----CCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPP-----PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~-----~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~ 77 (290)
.|||+.||.|.||+.+|+++++. ..+|+++||+||++.. ..+++++.+++++++||++||+||||||++|||+
T Consensus 50 ~DTA~~Yg~G~sE~~lG~al~~~--~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~ 127 (327)
T 3eau_A 50 FDTAEVYAAGKAEVVLGNIIKKK--GWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD 127 (327)
T ss_dssp EEEETTGGGGHHHHHHHHHHHHH--TCCGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCC
T ss_pred EECccccCCCChHHHHHHHHHhc--CCccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCC
Confidence 58999999999999999877654 3479999999998532 1246899999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-----CCCeeeeeccccccccCh-hhhHHHHHHHhCCeE
Q 022904 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKL 151 (290)
Q Consensus 78 ~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v 151 (290)
...+ .+++|++|++|+++||||+||||||+++++.++... .++++++|++||++++.. +.+++++|+++||++
T Consensus 128 ~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v 206 (327)
T 3eau_A 128 PNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGA 206 (327)
T ss_dssp TTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEE
T ss_pred CCCC-HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeE
Confidence 9888 899999999999999999999999999999988764 268999999999998874 557999999999999
Q ss_pred EeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCc--hhHHHHHHHHHHHHHHcCCChHHHHHHHHHh
Q 022904 152 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRYILD 229 (290)
Q Consensus 152 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~g~s~~~~al~~~l~ 229 (290)
++|+||++|+|++++... .| ...+.. ...+.....++..+ .......+.+.++|+++|+|++|+||+|+++
T Consensus 207 ~a~spL~~G~Ltg~~~~~---~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~ 279 (327)
T 3eau_A 207 MTWSPLACGIVSGKYDSG---IP-PYSRAS---LKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLR 279 (327)
T ss_dssp EEECTTGGGGGGTTTTTS---CC-TTSGGG---STTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHS
T ss_pred EEeccccCceecCcccCC---CC-CCcccc---cccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHh
Confidence 999999999999988764 12 111111 01111111111111 1123456889999999999999999999999
Q ss_pred CCCcceeeecCCCCCHhHHHHhHhhhcC--CCCHHHHHHHHHHHhc
Q 022904 230 QPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKK 273 (290)
Q Consensus 230 ~~~v~~~i~g~~~~~~~~l~enl~a~~~--~Lt~e~~~~l~~~~~~ 273 (290)
+|.|+++|+|++ +++||++|++++++ +||++++++|+++.+.
T Consensus 280 ~~~v~~vI~g~~--~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~ 323 (327)
T 3eau_A 280 NEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGN 323 (327)
T ss_dssp STTCCEEEECCS--SHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCC
T ss_pred CCCCceEEeCCC--CHHHHHHHHHHhccCCCCCHHHHHHHHHHhhc
Confidence 999999999999 99999999999998 8999999999999754
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=5.3e-53 Score=384.18 Aligned_cols=254 Identities=19% Similarity=0.301 Sum_probs=217.7
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccC---CCCC---CCCHHHHHHHHHHHHhhhCCCcccEEEEecC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWV---PPPV---KMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 76 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~---~~~~---~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p 76 (290)
.|||+.||.|.||+.+|++++.. ++|+++||+||++ +... +.+++.+++++++||++||+||||+|+||+|
T Consensus 51 ~DTA~~Yg~G~sE~~lG~al~~~---~~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p 127 (333)
T 1pz1_A 51 IDTAPAYGFGQSEEIVGKAIKEY---MKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWP 127 (333)
T ss_dssp EECCTTGGGGHHHHHHHHHHHHH---TCGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSC
T ss_pred EECccccCCCchHHHHHHHHhcC---CCcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCC
Confidence 58999999999999999877653 3899999999997 2111 4689999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 77 DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+...+ .+++|++|++|+++||||+||||||+++++.++++. .+|+++|++||++++..+.+++++|+++||++++|+|
T Consensus 128 ~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~sp 205 (333)
T 1pz1_A 128 DPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV-APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGS 205 (333)
T ss_dssp CTTSC-HHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT-SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCT
T ss_pred CCCCC-HHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc-CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeec
Confidence 98877 799999999999999999999999999999999984 7899999999999998878899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCC--chhHHHHHHHHHHHHHHcCC-ChHHHHHHHHHhCCCc
Q 022904 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGG--WSQFQVLLQTLKRIASKHGV-SIPVVAVRYILDQPAV 233 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~la~~~g~-s~~~~al~~~l~~~~v 233 (290)
|++|+|++++.....+.+ .+.+ .....+.. .+...++.+.+.++|+++|+ |++|+||+|++++|.|
T Consensus 206 L~~G~Ltg~~~~~~~~~~-~~~r----------~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v 274 (333)
T 1pz1_A 206 LCRGLLTGKMTEEYTFEG-DDLR----------NHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGA 274 (333)
T ss_dssp TGGGTTSSCCCTTCCCCT-TCGG----------GSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTC
T ss_pred ccCCccCCCccccccCCC-cccc----------ccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCC
Confidence 999999998755421111 1111 00011111 12344567899999999999 9999999999999999
Q ss_pred ceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 234 AGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 234 ~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
+++|+|++ +++||++|+++++++||+++++.|+++..+.
T Consensus 275 ~~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 313 (333)
T 1pz1_A 275 DIALWGAR--KPGQLEALSEITGWTLNSEDQKDINTILENT 313 (333)
T ss_dssp CEEEEECC--SGGGGTTCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred eEEEeCCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHHhhc
Confidence 99999999 9999999999999999999999999998753
No 5
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=2.3e-52 Score=382.00 Aligned_cols=267 Identities=20% Similarity=0.269 Sum_probs=214.7
Q ss_pred cccccccCC--ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC------CCCCHHHHHHHHHHHHhhhCCCcccEEEEe
Q 022904 3 CHLVFTYGM--GLLKISMASSSIEFVERGHQSSWISLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 3 ~~~a~~Yg~--G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH 74 (290)
.|||+.||. |.||+.+|+++++.. .+.|+++||+||++... ...+++.+++++++||++||+||||||+||
T Consensus 60 ~DTA~~Yg~~~G~sE~~lG~al~~~~-~~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH 138 (346)
T 3n6q_A 60 FDLANNYGPPPGSAEENFGRLLREDF-AAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSH 138 (346)
T ss_dssp EECCTTCTTTTTHHHHHHHHHHHHHC-TTTGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred EECccccCCCCCcHHHHHHHHHHhhc-ccccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEe
Confidence 589999998 999999998776541 23599999999975321 123899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc----CCCeeeeeccccccccChhh-hHHHHHHHhCC
Q 022904 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQQ-KMAELCQLTGV 149 (290)
Q Consensus 75 ~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~-~~~~~~~~~gi 149 (290)
+|+...+ ++++|++|++|+++||||+||||||++++++++... +.+++++|++||++++..+. +++++|+++||
T Consensus 139 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi 217 (346)
T 3n6q_A 139 RVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGV 217 (346)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTC
T ss_pred CCCCCCC-HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCC
Confidence 9999887 899999999999999999999999999999987654 57899999999999998766 89999999999
Q ss_pred eEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHh
Q 022904 150 KLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILD 229 (290)
Q Consensus 150 ~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~ 229 (290)
++++|+||++|+|++++... .| .+.+.... ...++.+...+.. +...+.++.+.++|+++|+|++|+||+|+++
T Consensus 218 ~v~a~spL~~G~L~g~~~~~---~~-~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~ 291 (346)
T 3n6q_A 218 GCIAFTPLAQGLLTGKYLNG---IP-QDSRMHRE-GNKVRGLTPKMLT-EANLNSLRLLNEMAQQRGQSMAQMALSWLLK 291 (346)
T ss_dssp EEEEBSTTGGGGGGTSCC----------------------------CC-HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTS
T ss_pred eEEEeccccCeecCCCccCC---CC-Cccccccc-cccccccchhhhh-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHh
Confidence 99999999999999987653 11 01110000 0000001111111 2344557899999999999999999999999
Q ss_pred CCCcceeeecCCCCCHhHHHHhHhhh-cCCCCHHHHHHHHHHHhcCCCCCCc
Q 022904 230 QPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVTKKGKDLLGV 280 (290)
Q Consensus 230 ~~~v~~~i~g~~~~~~~~l~enl~a~-~~~Lt~e~~~~l~~~~~~~~~~~~~ 280 (290)
+|.|.++|+|++ +++||++|++++ +++||+++++.|+++.++ ....-|
T Consensus 292 ~~~v~~~I~g~~--~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~-~~~~~w 340 (346)
T 3n6q_A 292 DDRVTSVLIGAS--RAEQLEENVQALNNLTFSTKELAQIDQHIAD-GELNLW 340 (346)
T ss_dssp STTCSEEEECCS--SHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH-TTCC--
T ss_pred CCCCcEEEcCCC--CHHHHHHHHhhccCCCCCHHHHHHHHHHHhc-cCCcch
Confidence 999999999999 999999999998 689999999999999876 455556
No 6
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-52 Score=384.52 Aligned_cols=259 Identities=17% Similarity=0.227 Sum_probs=215.2
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC-----CCCCHHHHHHHHHHHHhhhCCCcccEEEEecCC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP-----VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD 77 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~-----~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~ 77 (290)
.|||+.||.|.||+.||+++++. ..+|+++||+||++... .+++++.+++++++||++||+||||||+||||+
T Consensus 84 ~DTA~~Yg~G~sE~~lG~al~~~--~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd 161 (367)
T 3lut_A 84 FDTAEVYAAGKAEVVLGNIIKKK--GWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD 161 (367)
T ss_dssp EEEETTGGGGHHHHHHHHHHHHH--TCCGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCC
T ss_pred EECccccCCCchHHHHHHHHHhC--CCCCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCC
Confidence 58999999999999999877654 34799999999995321 246899999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-----CCCeeeeeccccccccCh-hhhHHHHHHHhCCeE
Q 022904 78 YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKL 151 (290)
Q Consensus 78 ~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v 151 (290)
...+ ++++|++|++|+++||||+||||||+.+++.++... .++|+++|++||++++.. +.+++++|+++||++
T Consensus 162 ~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v 240 (367)
T 3lut_A 162 PNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGA 240 (367)
T ss_dssp TTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEE
T ss_pred CCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeE
Confidence 8887 899999999999999999999999999999988764 368999999999999876 558999999999999
Q ss_pred EeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCch--hHHHHHHHHHHHHHHcCCChHHHHHHHHHh
Q 022904 152 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS--QFQVLLQTLKRIASKHGVSIPVVAVRYILD 229 (290)
Q Consensus 152 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~la~~~g~s~~~~al~~~l~ 229 (290)
++|+||++|+|++++... .| ...+........+ ..++..+. ......+.+.++|+++|+|++|+||+|+++
T Consensus 241 ~a~spL~~G~Ltgk~~~~---~~-~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~ 313 (367)
T 3lut_A 241 MTWSPLACGIVSGKYDSG---IP-PYSRASLKGYQWL---KDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLR 313 (367)
T ss_dssp EEECTTGGGGGGTTTTTS---CC-TTSGGGSTTCHHH---HHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHT
T ss_pred EEecccccccccCCcCCC---CC-Ccccccccccccc---cccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 999999999999988754 11 0111100000011 01111111 122446889999999999999999999999
Q ss_pred CCCcceeeecCCCCCHhHHHHhHhhhcC--CCCHHHHHHHHHHHhc
Q 022904 230 QPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKK 273 (290)
Q Consensus 230 ~~~v~~~i~g~~~~~~~~l~enl~a~~~--~Lt~e~~~~l~~~~~~ 273 (290)
++.|+++|+|++ +++||++|+++++. +||+++++.|+++.+.
T Consensus 314 ~~~v~~vI~g~~--~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~ 357 (367)
T 3lut_A 314 NEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGN 357 (367)
T ss_dssp STTEEEEEECCS--SHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCC
T ss_pred CCCCcEEecCCC--CHHHHHHHHHhhcccCCCCHHHHHHHHHHHhc
Confidence 999999999999 99999999999987 8999999999999754
No 7
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=5.8e-52 Score=380.12 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=213.3
Q ss_pred cccccccCC--ChhhHHhhhchHHHhhhCCCCcEEEEeccCCC----C--CCCCHHHHHHHHHHHHhhhCCCcccEEEEe
Q 022904 3 CHLVFTYGM--GLLKISMASSSIEFVERGHQSSWISLTKWVPP----P--VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 3 ~~~a~~Yg~--G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~----~--~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH 74 (290)
.|||+.||. |.||+.||+++++.. .+.|+++||+||++.. . ...+++.+++++++||++||+||||+|+||
T Consensus 81 ~DTA~~Yg~~~G~sE~~lG~al~~~~-~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH 159 (353)
T 3erp_A 81 FDLANNYGPPPGSAECNFGRILQEDF-LPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHH 159 (353)
T ss_dssp EECCTTCTTTTTHHHHHHHHHHHHHT-GGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred EEChhhhCCCCChHHHHHHHHHHhhc-cCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEec
Confidence 589999999 999999998776521 2359999999999642 1 123899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc----CCCeeeeeccccccccChhhhHHHHHHHhCCe
Q 022904 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 150 (290)
Q Consensus 75 ~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 150 (290)
||+...+ ++++|++|++|+++||||+||||||++++++++.+. +++|+++|++||++++..+.+++++|+++||+
T Consensus 160 ~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~ 238 (353)
T 3erp_A 160 RPDPETP-LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVG 238 (353)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCE
T ss_pred CCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCe
Confidence 9999888 799999999999999999999999999999988764 57899999999999998878899999999999
Q ss_pred EEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhC
Q 022904 151 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQ 230 (290)
Q Consensus 151 via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~ 230 (290)
+++|+||++|+|++++... .|. +.+.... ... +...+. .+...+..+.+.++|+++|+|++|+||+|++++
T Consensus 239 v~a~spL~~G~Ltg~~~~~---~p~-~~r~~~~-~~~---~~~~~~-~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~ 309 (353)
T 3erp_A 239 SIAFSPLAGGQLTDRYLNG---IPE-DSRAASG-SRF---LKPEQI-TADKLEKVRRLNELAARRGQKLSQMALAWVLRN 309 (353)
T ss_dssp EEEBSTTGGGTSSGGGTC---------------------------C-CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTT
T ss_pred EEEeccccccccCCCccCC---CCC-ccccccc-ccc---cccccc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 9999999999999988764 111 1110000 000 001111 122445578999999999999999999999999
Q ss_pred CCcceeeecCCCCCHhHHHHhHhhh-cCCCCHHHHHHHHHHH
Q 022904 231 PAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVT 271 (290)
Q Consensus 231 ~~v~~~i~g~~~~~~~~l~enl~a~-~~~Lt~e~~~~l~~~~ 271 (290)
|.|+++|+|++ +++||++|++++ +++||++++++|+++.
T Consensus 310 ~~v~~vI~G~~--~~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 310 DNVTSVLIGAS--KPSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp SCCCEEEECCS--SHHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred CCCcEEEeCCC--CHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 99999999999 999999999999 8899999999999987
No 8
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=3.2e-52 Score=378.23 Aligned_cols=272 Identities=17% Similarity=0.236 Sum_probs=220.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC-CCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP-VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNP 81 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~-~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~ 81 (290)
.|||+.||.|.||+.||++++.. ...|+++||+||+++.. .+++++.+++++++||++||+||||||+||+|+...+
T Consensus 39 ~DTA~~Yg~G~sE~~lG~al~~~--~~~r~~~~i~TK~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~ 116 (327)
T 1gve_A 39 IDTAFVYANGQSETILGDLGLGL--GRSGCKVKIATKAAPMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTP 116 (327)
T ss_dssp EECCTTGGGGHHHHHHTTSCCCT--TSTTCCSEEEEEECSCTTCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSC
T ss_pred EEchhhcCCCchHHHHHHHHhhc--CCCCCeEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCC
Confidence 58999999999999999876432 22477899999997531 2568999999999999999999999999999998877
Q ss_pred cHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc----C-CCeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 82 GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 82 ~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~----~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
++++|++|++|+++||||+||||||+.+++.++.+. + ++|+++|++||++++..+.+++++|+++||++++|+|
T Consensus 117 -~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~sp 195 (327)
T 1gve_A 117 -IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNP 195 (327)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECT
T ss_pred -HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecc
Confidence 799999999999999999999999999999988765 3 6799999999999998877899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCc-chhHhhhhhhccCCchhHHHHHHHHHHHHHH----cCCChHHHHHHHHHhCC
Q 022904 157 VMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVRYILDQP 231 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~g~s~~~~al~~~l~~~ 231 (290)
|++|+|++++.....+..-..+++... ....+ ..++..+. ..+..+.+.++|++ +|+|++|+||+|++++|
T Consensus 196 L~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~ 271 (327)
T 1gve_A 196 LAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLY---MDRYWKEE-HFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHS 271 (327)
T ss_dssp TGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHH---HHHHCSHH-HHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTS
T ss_pred cccccccCcccCCCccccCCCccccccccchhh---hhcccChH-HHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCC
Confidence 999999987654311000001111100 01111 11222222 23456899999999 99999999999999999
Q ss_pred Cc-----ceeeecCCCCCHhHHHHhHhhhcC-CCCHHHHHHHHHHHhcCCCCCCccCCCccccc
Q 022904 232 AV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKGKDLLGVIGDCGDEYR 289 (290)
Q Consensus 232 ~v-----~~~i~g~~~~~~~~l~enl~a~~~-~Lt~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (290)
.| .++|+|++ +++||++|+++++. +||+++++.|+++....+ ++|.+.|+
T Consensus 272 ~v~~~~g~~~I~g~~--~~~~l~en~~a~~~~~L~~e~~~~l~~~~~~~~------~~~~~~~~ 327 (327)
T 1gve_A 272 QLKGTQGDAVILGMS--SLEQLEQNLALVEEGPLEPAVVDAFDQAWNLVA------HECPNYFR 327 (327)
T ss_dssp SCCGGGTCEEEECCS--SHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHG------GGCCCSCC
T ss_pred CccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcc------CCCccccC
Confidence 98 78999999 99999999999987 899999999999986532 34555554
No 9
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=2.9e-51 Score=374.62 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=213.6
Q ss_pred cccccccC-------CChhhHHhhhchHHHhhhCCCCcEEEEeccCCC------C----CCCCHHHHHHHHHHHHhhhCC
Q 022904 3 CHLVFTYG-------MGLLKISMASSSIEFVERGHQSSWISLTKWVPP------P----VKMTSSIVRESIDVSRRRMDV 65 (290)
Q Consensus 3 ~~~a~~Yg-------~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~------~----~~~~~~~i~~~~~~SL~~Lg~ 65 (290)
.|||+.|| .|.||+.||+++++. ++|+++||+||+++. + .+++++.+++++++||++||+
T Consensus 47 ~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~---~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~ 123 (346)
T 1lqa_A 47 IDVAEMYPVPPRPETQGLTETYVGNWLAKH---GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQT 123 (346)
T ss_dssp EECCTTCSSSCCTTTTTHHHHHHHHHHHHH---CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTS
T ss_pred EEChhhcCCCccCCCCCccHHHHHHHHhhc---CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 58999996 799999999877653 489999999999742 1 136899999999999999999
Q ss_pred CcccEEEEecCC---------------C--CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc----C-CCee
Q 022904 66 PCLDMLQFHWWD---------------Y--SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVV 123 (290)
Q Consensus 66 d~iDl~~lH~p~---------------~--~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~----~-~~~~ 123 (290)
||||||+||||. . ..+ .+++|++|++|+++||||+||||||+.+++.++++. + .+|+
T Consensus 124 dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~ 202 (346)
T 1lqa_A 124 DYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS-LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIV 202 (346)
T ss_dssp SCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCC
T ss_pred CceeEEEecCccccccccccccccccccccCCC-HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCce
Confidence 999999999993 2 234 789999999999999999999999999988877654 4 4699
Q ss_pred eeeccccccccChhhhHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHH
Q 022904 124 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQV 203 (290)
Q Consensus 124 ~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (290)
++|++||++++..+.+++++|+++||++++|+||++|+|++++.... .|.. .+ ...+..+ .++ ..+...+
T Consensus 203 ~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~--~p~~-~~-----~~~~~~~-~~~-~~~~~~~ 272 (346)
T 1lqa_A 203 TIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGA--KPAG-AR-----NTLFSRF-TRY-SGEQTQK 272 (346)
T ss_dssp EEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGGGC--CCTT-CH-----HHHCTTC-CTT-CSHHHHH
T ss_pred EEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcccccc--CCCc-ch-----hhcchhh-ccc-ccHHHHH
Confidence 99999999999887889999999999999999999999998875421 1100 00 0000000 011 1233455
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022904 204 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 204 ~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~ 275 (290)
..+.+.++|+++|+|++|+||+|++++|.|+++|+|++ +++||++|+++++++||+++++.|+++.....
T Consensus 273 ~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 342 (346)
T 1lqa_A 273 AVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT--TMDQLKTNIESLHLELSEDVLAEIEAVHQVYT 342 (346)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCS--SHHHHHHHHGGGGCCCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHHhhcc
Confidence 67899999999999999999999999999999999999 99999999999999999999999999987543
No 10
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.5e-51 Score=372.22 Aligned_cols=233 Identities=16% Similarity=0.157 Sum_probs=208.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC----------CCCCHHHHHHHHHHHHhhhCCCcccEEE
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP----------VKMTSSIVRESIDVSRRRMDVPCLDMLQ 72 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~----------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~ 72 (290)
.|||+.||.|.||+.+|+++++. ..+|+++||+||++... .+.+++.+++++++||++||+||||+|+
T Consensus 70 ~DTA~~Yg~G~sE~~lG~al~~~--~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~ 147 (319)
T 1ur3_M 70 VDHADIYGGYQCEAAFGEALKLA--PHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLL 147 (319)
T ss_dssp EECCSSTTTTTHHHHHHHHHHHC--GGGTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEE
T ss_pred EEcccccCCCcHHHHHHHHHHhC--CCCCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEE
Confidence 58999999999999999877653 24799999999997421 2578999999999999999999999999
Q ss_pred EecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccCh-hhhHHHHHHHhCCe
Q 022904 73 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVK 150 (290)
Q Consensus 73 lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~ 150 (290)
+|||+...+ .+++|++|++|+++||||+||||||++++++++.+. +.+|+++|++||++++.. +.+++++|+++||+
T Consensus 148 lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~ 226 (319)
T 1ur3_M 148 IHRPDPLMD-ADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVR 226 (319)
T ss_dssp ECSCCTTCC-HHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCC
T ss_pred ecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCe
Confidence 999998777 799999999999999999999999999999999876 568999999999999886 46799999999999
Q ss_pred EEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCCh-HHHHHHHHHh
Q 022904 151 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI-PVVAVRYILD 229 (290)
Q Consensus 151 via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~-~~~al~~~l~ 229 (290)
+++|+||++|.|... + ......+.+.++|+++|+|+ +|+||+|+++
T Consensus 227 v~a~spL~~G~L~~~--------~-------------------------~~~~~~~~l~~ia~~~g~t~~aqvaL~w~l~ 273 (319)
T 1ur3_M 227 PMAWSCLGGGRLFND--------D-------------------------YFQPLRDELAVVAEELNAGSIEQVVNAWVLR 273 (319)
T ss_dssp CEEECCCTTTCSSSC--------G-------------------------GGHHHHHHHHHHHHHTTCSCHHHHHHHHHHT
T ss_pred EEEeccccCccccCC--------c-------------------------hhHHHHHHHHHHHHHcCCChHHHHHHHHHHh
Confidence 999999999987420 0 01223588999999999999 9999999999
Q ss_pred CCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 230 QPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 230 ~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+|.+.++|+|++ +++||++|+++++++||++++++|+++...
T Consensus 274 ~~~~~~~I~G~~--~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~ 315 (319)
T 1ur3_M 274 LPSQPLPIIGSG--KIERVRAAVEAETLKMTRQQWFRIRKAALG 315 (319)
T ss_dssp STTCCEEEECCS--CHHHHHHHHGGGGCCCCHHHHHHHHHHHHS
T ss_pred CCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence 999999999999 999999999999999999999999998753
No 11
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.9e-52 Score=381.09 Aligned_cols=251 Identities=20% Similarity=0.272 Sum_probs=208.2
Q ss_pred cccccccCC-ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC-------CCCCHHHHHHHHHHHHhhhCCCcccEEEEe
Q 022904 3 CHLVFTYGM-GLLKISMASSSIEFVERGHQSSWISLTKWVPPP-------VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 3 ~~~a~~Yg~-G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~-------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH 74 (290)
.|||+.||. |.||+.+|+++++ .+|+++||+||+++.. .+.+++.+++++++||++||+||||+|+||
T Consensus 51 ~DTA~~Yg~~G~sE~~lG~al~~----~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH 126 (337)
T 3v0s_A 51 FDTSDIYGENGSNEELLGKALKQ----LPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIH 126 (337)
T ss_dssp EECCTTSSSTTHHHHHHHHHHTT----SCGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEES
T ss_pred EEChhhhCCCCcHHHHHHHHHhh----cCCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEec
Confidence 589999997 7999999975543 3899999999998642 156899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEec
Q 022904 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 75 ~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
||+...+ .+++|++|++|+++||||+||||||++++++++.. ..+++++|++||++++..+.+++++|+++||++++|
T Consensus 127 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~-~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~ 204 (337)
T 3v0s_A 127 RIDTTVP-IEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHA-VHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPY 204 (337)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHH-HSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEE
T ss_pred CCCCCCC-HHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhc-cCCceEEEeeccccccchhHHHHHHHHHcCceEEEe
Confidence 9999888 79999999999999999999999999999999987 467899999999999988778999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCc--hhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCC
Q 022904 155 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 232 (290)
Q Consensus 155 spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~ 232 (290)
+||++|+|+++..... .+ ..+ ++...++|... +......+.+.++|+++|+|++|+||+|++++|.
T Consensus 205 spL~~G~L~g~~~~~~--~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~ 272 (337)
T 3v0s_A 205 SPIGRGLFWGKAIKES--LP--ENS--------VLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGE 272 (337)
T ss_dssp STTHHHHHHHHHHHC-------------------------------------CHHHHHHHHHTTSCHHHHHHHHHHTTCT
T ss_pred ccccCcccCCCCCCCC--CC--Ccc--------hhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Confidence 9999999998632210 11 111 11111111111 1123445789999999999999999999999999
Q ss_pred cceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 233 VAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 233 v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+.++|+|++ +++||++|+++++++||+++++.|+++.++
T Consensus 273 v~~~I~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~ 311 (337)
T 3v0s_A 273 DVVPIPGTT--KIKNLHNNVGALKVXLTKEDLKEISDAVPL 311 (337)
T ss_dssp TBCCCCCCS--CHHHHHHHHHGGGCCCCHHHHHHHHHTCC-
T ss_pred CeEEEcCCC--CHHHHHHHHHHhccCCCHHHHHHHHHhhcc
Confidence 999999999 999999999999999999999999998754
No 12
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2.6e-51 Score=376.57 Aligned_cols=264 Identities=16% Similarity=0.204 Sum_probs=215.5
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC-CCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP-VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNP 81 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~-~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~ 81 (290)
.|||+.||.|.||+.||+++++. ++.|+++||+||+++.. .+++++.+++++++||++||+||||||+||+|+...+
T Consensus 72 ~DTA~~Yg~G~sE~~lG~al~~~--~~~r~~v~I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~ 149 (360)
T 2bp1_A 72 LDTAFMYSDGQSETILGGLGLGL--GGGDCRVKIATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTP 149 (360)
T ss_dssp EECCTTGGGGHHHHHHHTSCCCT--TSTTCCCEEEEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC
T ss_pred EECccccCCCChHHHHHHHHhhc--cCCCCeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC
Confidence 58999999999999999876422 24466799999997531 2578999999999999999999999999999998877
Q ss_pred cHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc----C-CCeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 82 GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 82 ~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~----~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
++++|++|++|+++||||+||||||+.+++.++.+. + ++++++|++||++++..+.+++++|+++||++++|+|
T Consensus 150 -~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~sp 228 (360)
T 2bp1_A 150 -VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNP 228 (360)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECT
T ss_pred -HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecc
Confidence 799999999999999999999999999999988765 3 6799999999999998877899999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHH----cCCChHHHHHHHHHhCCC
Q 022904 157 VMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVRYILDQPA 232 (290)
Q Consensus 157 l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~g~s~~~~al~~~l~~~~ 232 (290)
|++|+|++++.....+.....+++..... -..+..++..+. ..+..+.+.++|++ +|+|++|+||+|++++|.
T Consensus 229 L~~G~Ltg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~ 305 (360)
T 2bp1_A 229 LAGGLLTGKYKYEDKDGKQPVGRFFGNSW--AETYRNRFWKEH-HFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQ 305 (360)
T ss_dssp TGGGGGGTCCCGGGGTTTCCSBTTBSSTT--HHHHHHHHCCHH-HHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSS
T ss_pred cccCcccCCccCcCccccccccccccccc--chhhhhcccchh-HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCc
Confidence 99999998865431110000111110000 001112222222 23456889999999 999999999999999998
Q ss_pred c-----ceeeecCCCCCHhHHHHhHhhhcC-CCCHHHHHHHHHHHhcC
Q 022904 233 V-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 233 v-----~~~i~g~~~~~~~~l~enl~a~~~-~Lt~e~~~~l~~~~~~~ 274 (290)
| .++|+|++ +++||++|+++++. +|++++++.|+++....
T Consensus 306 v~~~~g~~vI~G~~--~~~~l~enl~a~~~~~L~~e~~~~l~~~~~~~ 351 (360)
T 2bp1_A 306 LQGAHGDAVILGMS--SLEQLEQNLAATEEGPLEPAVVDAFNQAWHLV 351 (360)
T ss_dssp CCGGGTCEEEECCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc
Confidence 8 78999999 99999999999997 89999999999998654
No 13
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=4.3e-51 Score=369.07 Aligned_cols=236 Identities=21% Similarity=0.291 Sum_probs=201.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCC--------CCCCHHHHHHHHHHHHhhhCCCcccEEEEe
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPP--------VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 74 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~--------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH 74 (290)
.|||+.||.|.||+.+|++++ .+|+++||+||+++.. .+.+++.+++++++||++||+||||+|+||
T Consensus 65 ~DTA~~Yg~G~sE~~lG~al~-----~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH 139 (317)
T 1ynp_A 65 LDTADLYNQGLNEQFVGKALK-----GRRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLH 139 (317)
T ss_dssp EECSCBTTBCCCHHHHHHHHT-----TCGGGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred EECccccCCCchHHHHHHHHh-----cCCCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEec
Confidence 589999999999999997553 2799999999997532 256899999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEec
Q 022904 75 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 75 ~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
||+...+ .+++|++|++|+++||||+||||||++++++++++. .+|+++|++||++++..+. ++++|+++||++++|
T Consensus 140 ~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~ 216 (317)
T 1ynp_A 140 GGTIDDP-IDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKR-SNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVR 216 (317)
T ss_dssp SCCTTSC-HHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEE
T ss_pred CCCCCCC-hHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhc-CCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEe
Confidence 9998777 789999999999999999999999999999999985 4689999999999998765 999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcc
Q 022904 155 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 234 (290)
Q Consensus 155 spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~ 234 (290)
+||++|.|+++ ... . . . .+.. +....+.+.+.++|+ |+|++|+||+|++++|.|.
T Consensus 217 spL~~G~L~~~-~~~----~-~-~---------------~~~~-~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~ 271 (317)
T 1ynp_A 217 GPVARGLLSRR-PLP----E-G-E---------------GYLN-YRYDELKLLRESLPT--DRPLHELALQYCLAHDVVA 271 (317)
T ss_dssp CTTGGGTTSSS-CCC----T-T-C---------------CBTT-BCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEE
T ss_pred cCccCcccCCC-CCc----c-c-c---------------cccc-ccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCe
Confidence 99999999876 111 0 0 0 0000 011233477888888 9999999999999999999
Q ss_pred eeeecCCCCCHhHHHHhHhhhc-CCCCHHHHHHHHHHHhc
Q 022904 235 GSMIGVRLGLAEHIQDTNAIFM-LSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 235 ~~i~g~~~~~~~~l~enl~a~~-~~Lt~e~~~~l~~~~~~ 273 (290)
++|+|++ +++||++|+++++ ++||+++++.|+++.++
T Consensus 272 ~vI~g~~--~~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~ 309 (317)
T 1ynp_A 272 TVAAGAS--SIDQVKANVQAVEATPLTAEERQHIQKLAKA 309 (317)
T ss_dssp EEECCCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHSCC
T ss_pred EEEeCCC--CHHHHHHHHHhccCCCCCHHHHHHHHHHHhh
Confidence 9999999 9999999999999 89999999999998754
No 14
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-50 Score=363.00 Aligned_cols=219 Identities=19% Similarity=0.341 Sum_probs=199.6
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|+||||+...+
T Consensus 64 ~DTA~~Yg---~E~~lG~al~~~--~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~- 135 (298)
T 3up8_A 64 VDTAQIYG---NEAEVGEAIQKS--GIPRADVFLTTKVWVD--NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVP- 135 (298)
T ss_dssp EECCTTTT---CHHHHHHHHHHH--TCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSC-
T ss_pred EECCCccc---CHHHHHHHHHHc--CCChHHEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCC-
Confidence 58999999 799999877654 3479999999999864 568999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++.+. .+++++|+++||++++|+||++|.
T Consensus 136 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 213 (298)
T 3up8_A 136 MAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGK 213 (298)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGH
T ss_pred HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCc
Confidence 799999999999999999999999999999999987 67899999999998774 589999999999999999999997
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|... +.+.++|+++|+|++|+||+|++++|+|+ +|+|++
T Consensus 214 l~~~----------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~p~v~-~I~g~~ 252 (298)
T 3up8_A 214 VPAD----------------------------------------PLLTEIGGRHGKTAAQVALRWLVQQQDVI-VLSKTA 252 (298)
T ss_dssp HHHC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHTSTTEE-EEECCC
T ss_pred cccc----------------------------------------chHHHHHHHcCCCHHHHHHHHHHHCCCcE-EEECCC
Confidence 5321 68999999999999999999999998886 799999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
+++||++|+++++++||+++++.|+++..+.
T Consensus 253 --~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~ 283 (298)
T 3up8_A 253 --TEARLKENFAIFDFALTREEMAAVRELARPN 283 (298)
T ss_dssp --SHHHHHHHHCCSSCCCCHHHHHHHHTTCCTT
T ss_pred --CHHHHHHHHHhCCCCCCHHHHHHHHHHhccC
Confidence 9999999999999999999999999984443
No 15
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=3.8e-49 Score=349.84 Aligned_cols=216 Identities=22% Similarity=0.349 Sum_probs=195.7
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+...
T Consensus 48 ~DTA~~Yg---~E~~lG~al~~~--~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-- 118 (276)
T 3f7j_A 48 IDTAAIYK---NEEGVGIGIKES--GVAREELFITSKVWNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-- 118 (276)
T ss_dssp EECCGGGS---CHHHHHHHHHHH--CSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS--
T ss_pred EECcCccc---CHHHHHHHHhhc--CCCcccEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc--
Confidence 58999998 599999877643 3479999999999864 45899999999999999999999999999998754
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++.+. .+++++|+++||++++|+||++|.
T Consensus 119 ~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 196 (276)
T 3f7j_A 119 YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQ 196 (276)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGT
T ss_pred HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCc
Confidence 689999999999999999999999999999999886 67889999999997764 589999999999999999999997
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|... +.+.++|+++|+|++|+||+|++++|.+ +|+|++
T Consensus 197 l~~~----------------------------------------~~l~~ia~~~g~t~aqval~w~l~~~~v--~i~g~~ 234 (276)
T 3f7j_A 197 LLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHGVV--TIPKSI 234 (276)
T ss_dssp TTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCC
T ss_pred cCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EeeCCC
Confidence 6421 6899999999999999999999999875 699999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++.+.
T Consensus 235 --~~~~l~en~~a~~~~L~~e~~~~l~~l~~~ 264 (276)
T 3f7j_A 235 --KEHRIIENADIFDFELSQEDMDKIDALNKD 264 (276)
T ss_dssp --SHHHHHHHTCCSSCCCCHHHHHHHHTTCCC
T ss_pred --CHHHHHHHHhhCCCCCCHHHHHHHHhhccC
Confidence 999999999999999999999999998654
No 16
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=3.1e-49 Score=352.50 Aligned_cols=217 Identities=19% Similarity=0.278 Sum_probs=194.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC--
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN-- 80 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~-- 80 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+...
T Consensus 52 ~DTA~~Yg---~E~~vG~al~~~--~~~R~~~~I~TK~~~~--~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~ 124 (288)
T 4f40_A 52 IDTAAIYK---NEESVGAGLRAS--GVPREDVFITTKLWNT--EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDIL 124 (288)
T ss_dssp EECCGGGT---CHHHHHHHHHHH--TCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHH
T ss_pred EECccccc---CHHHHHHHHHhc--CCChhhEEEEEecCCC--cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccc
Confidence 58999998 799999877643 3479999999999864 45899999999999999999999999999998642
Q ss_pred ----ccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 81 ----PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 81 ----~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
....++|++|++|+++||||+||||||++++++++++. .++++++|++||++++. .+++++|+++||++++|+
T Consensus 125 ~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~s 202 (288)
T 4f40_A 125 SKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWS 202 (288)
T ss_dssp HHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEES
T ss_pred ccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEec
Confidence 22689999999999999999999999999999999986 57899999999998876 479999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcce
Q 022904 156 TVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAG 235 (290)
Q Consensus 156 pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~ 235 (290)
||++|.|.+. +.+.++|+++|+|++|+||+|++++| .+
T Consensus 203 pl~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~w~l~~~--~~ 240 (288)
T 4f40_A 203 PLGQGKLLSN----------------------------------------PILSAIGAKYNKTAAQVILRWNIQKN--LI 240 (288)
T ss_dssp TTC--CGGGC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT--CE
T ss_pred CCCCCccccc----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC--Ce
Confidence 9999977531 68899999999999999999999998 46
Q ss_pred eeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHh
Q 022904 236 SMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 272 (290)
Q Consensus 236 ~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~ 272 (290)
+|+|++ +++||++|+++++++||+++++.|+++..
T Consensus 241 ~i~g~~--~~~~l~en~~~~~~~L~~ee~~~i~~l~~ 275 (288)
T 4f40_A 241 TIPKSV--HRERIEENADIFDFELGAEDVMSIDALNT 275 (288)
T ss_dssp ECCBCS--SHHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred EeeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhcc
Confidence 799999 99999999999999999999999999864
No 17
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.4e-49 Score=353.59 Aligned_cols=215 Identities=20% Similarity=0.293 Sum_probs=193.1
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+.....
T Consensus 67 ~DTA~~Yg---~E~~lG~al~~~--~~~R~~~~i~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~ 139 (283)
T 3o0k_A 67 IDTATIYG---NEEGVGKAINGS--GIARADIFLTTKLWNS--DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDL 139 (283)
T ss_dssp EECCGGGS---CHHHHHHHHHTS--SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHH
T ss_pred EECccccc---CHHHHHHHHHHc--CCCcccEEEEEccCCC--CCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCccc
Confidence 58999999 599999866533 2379999999999864 4578999999999999999999999999999887433
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||++++|+||++|.
T Consensus 140 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 217 (283)
T 3o0k_A 140 FMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGK 217 (283)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-
T ss_pred HHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCc
Confidence 789999999999999999999999999999999886 77889999999998764 589999999999999999999997
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|... +.+.++|+++|+|++|+||+|++++|.| +|+|++
T Consensus 218 l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~I~g~~ 255 (283)
T 3o0k_A 218 LLED----------------------------------------PTLKSIAEKHAKSVAQIILRWHIETGNI--VIPKSI 255 (283)
T ss_dssp CTTC----------------------------------------HHHHHHHHHHTSCHHHHHHHHHHHHTCE--ECCCCC
T ss_pred cccc----------------------------------------hHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEeCCC
Confidence 6321 6899999999999999999999999976 599999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHH
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEV 270 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~ 270 (290)
+++||++|+++++++||+++++.|+++
T Consensus 256 --~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 256 --TPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp --SHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred --CHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 999999999999999999999999864
No 18
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.2e-48 Score=354.58 Aligned_cols=232 Identities=17% Similarity=0.274 Sum_probs=199.7
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+..
T Consensus 52 iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 126 (326)
T 3buv_A 52 IDGAYIYQ---NEHEVGEAIREKIAEGKVRREDIFYCGKLWAT--NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFK 126 (326)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBC
T ss_pred EECccccC---CHHHHHHHHHHHHhcCCCChhHeEEEeeeCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccC
Confidence 58999998 6999999888765444 79999999999864 4589999999999999999999999999999641
Q ss_pred -----------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCC--eeeeeccccccccChhhh
Q 022904 80 -----------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 80 -----------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~~~~~~~~ 139 (290)
...+.++|++|++|+++||||+||||||+.++++++++. +++ ++++|++||++.+. .+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~ 204 (326)
T 3buv_A 127 PGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PK 204 (326)
T ss_dssp CSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HH
T ss_pred CccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HH
Confidence 113689999999999999999999999999999999986 566 89999999998764 58
Q ss_pred HHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCCh
Q 022904 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~ 219 (290)
++++|+++||++++|+||++|.|+ ++.... .| +++. .+.+.++|+++|+|+
T Consensus 205 l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~--~~------------------------~~~~--~~~l~~ia~~~g~s~ 255 (326)
T 3buv_A 205 LLKFCQQHDIVITAYSPLGTSRNP-IWVNVS--SP------------------------PLLK--DALLNSLGKRYNKTA 255 (326)
T ss_dssp HHHHHHHTTCEEEEESTTCCCCCT-TTSCTT--SC------------------------CGGG--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHcCCEEEEeccccCCccc-cccccC--Cc------------------------cccc--cHHHHHHHHHhCCCH
Confidence 999999999999999999999886 332210 00 1111 178999999999999
Q ss_pred HHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 220 ~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
+|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 256 aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 306 (326)
T 3buv_A 256 AQIVLRFNIQRG-V-VVIPKSF--NLERIKENFQIFDFSLTEEEMKDIEALNKNV 306 (326)
T ss_dssp HHHHHHHHHHTT-C-EECCBCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHhCC-C-EEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhccCC
Confidence 999999999998 3 6799999 9999999999999999999999999986543
No 19
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=4.9e-49 Score=350.14 Aligned_cols=218 Identities=18% Similarity=0.257 Sum_probs=195.1
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|++|++. ..+|+++||+||+++. +++++.+++++++||++||+||||+|++|||+.....
T Consensus 52 iDTA~~Yg---~E~~lG~al~~~--~~~R~~v~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~ 124 (283)
T 2wzm_A 52 IDTAAAYG---NEAAVGRAIAAS--GIPRDEIYVTTKLATP--DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSK 124 (283)
T ss_dssp EECCGGGT---CHHHHHHHHHHT--CCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHH
T ss_pred EECCCccc---CHHHHHHHHHhc--CCCcccEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCC
Confidence 58999998 699999877642 2379999999999764 5689999999999999999999999999999875323
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||++++|+||++|.
T Consensus 125 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 202 (283)
T 2wzm_A 125 YVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGR 202 (283)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTG
T ss_pred HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCc
Confidence 689999999999999999999999999999999987 77889999999998876 479999999999999999999985
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|.. . +.+.++|+++|+|++|+||+|+++++. ++|+|++
T Consensus 203 l~~----~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g~~ 240 (283)
T 2wzm_A 203 LLD----H------------------------------------PAVTAIAEAHGRTAAQVLLRWSIQLGN--VVISRSA 240 (283)
T ss_dssp GGG----C------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTC--EEEECCS
T ss_pred ccc----h------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCCC--EEEeCCC
Confidence 421 0 688999999999999999999999974 6799999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++...
T Consensus 241 --~~~~l~en~~~~~~~L~~~~~~~l~~~~~~ 270 (283)
T 2wzm_A 241 --NPERIASNLDVFGFELTADEMETLNGLDDG 270 (283)
T ss_dssp --SHHHHHHHHCCSSCCCCHHHHHHHHTCCCC
T ss_pred --CHHHHHHHHHhcCCCCCHHHHHHHHHHhhc
Confidence 999999999999999999999999998654
No 20
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=8.5e-49 Score=355.08 Aligned_cols=231 Identities=20% Similarity=0.317 Sum_probs=199.6
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC--
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~-- 78 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+.
T Consensus 49 iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~ 123 (323)
T 1afs_A 49 FDSAYLYE---VEEEVGQAIRSKIEDGTVKREDIFYTSKLWST--FHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQ 123 (323)
T ss_dssp EECCTTTT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEEC
T ss_pred EECccccc---CHHHHHHHHHHHHhcCCCChHHeEEEEecCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCC
Confidence 58999998 6999999888765444 79999999999864 457899999999999999999999999999942
Q ss_pred -----------------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CC--CeeeeeccccccccChhh
Q 022904 79 -----------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQ 138 (290)
Q Consensus 79 -----------------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~~~~~ 138 (290)
..+ ..++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++||++.+. .
T Consensus 124 ~~~~~~~~d~~~~~~~~~~~-~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~ 200 (323)
T 1afs_A 124 PGDIFFPRDEHGKLLFETVD-ICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--S 200 (323)
T ss_dssp SSSSSSCBCTTCCBCEECCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--H
T ss_pred CCcccCcccccccccccCCC-HHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--H
Confidence 123 689999999999999999999999999999999986 56 889999999998765 5
Q ss_pred hHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCC
Q 022904 139 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVS 218 (290)
Q Consensus 139 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s 218 (290)
+++++|+++||++++|+||++|.|++ +.... .| +++. .+.+.++|+++|+|
T Consensus 201 ~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~--~~------------------------~~~~--~~~l~~ia~~~g~s 251 (323)
T 1afs_A 201 KMLDYCKSKDIILVSYCTLGSSRDKT-WVDQK--SP------------------------VLLD--DPVLCAIAKKYKQT 251 (323)
T ss_dssp HHHHHHHHHTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCEEEEecCccCCcccc-ccccC--Cc------------------------chhc--CHHHHHHHHHhCCC
Confidence 79999999999999999999999875 32110 00 1111 17899999999999
Q ss_pred hHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 219 IPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 219 ~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 252 ~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 303 (323)
T 1afs_A 252 PALVALRYQLQRG-V-VPLIRSF--NAKRIKELTQVFEFQLASEDMKALDGLNRNF 303 (323)
T ss_dssp HHHHHHHHHHHTT-C-EEEECCS--CHHHHHHHTTTTSCCCCHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhCC-C-EEeeCCC--CHHHHHHHHhhccCCCCHHHHHHHHhhcccC
Confidence 9999999999998 3 6799999 9999999999999999999999999986543
No 21
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=6.5e-49 Score=353.22 Aligned_cols=216 Identities=22% Similarity=0.349 Sum_probs=195.8
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+...
T Consensus 82 ~DTA~~Yg---~E~~lG~al~~~--~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-- 152 (310)
T 3b3e_A 82 IDTAAIYK---NEEGVGIGIKES--GVAREELFITSKVWNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-- 152 (310)
T ss_dssp EECCGGGS---CHHHHHHHHHHS--SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC--
T ss_pred EECCCccC---CHHHHHHHHHhc--CCCcceEEEEEeCCCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc--
Confidence 58999998 599999877542 3489999999999864 45899999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++.+. .+++++|+++||++++|+||++|.
T Consensus 153 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 230 (310)
T 3b3e_A 153 YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQ 230 (310)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGT
T ss_pred HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEEeccccCCC
Confidence 689999999999999999999999999999999887 67899999999998764 589999999999999999999997
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|... +.+.++|+++|+|++|+||+|++++|.| +|+|++
T Consensus 231 l~~~----------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~gs~ 268 (310)
T 3b3e_A 231 LLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHGVV--TIPKSI 268 (310)
T ss_dssp TTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCC
T ss_pred cCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHcCCCe--EEeCCC
Confidence 6421 6899999999999999999999999975 699999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++.+.
T Consensus 269 --~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~ 298 (310)
T 3b3e_A 269 --KEHRIIENADIFDFELSQEDMDKIDALNKD 298 (310)
T ss_dssp --SHHHHHHHTCCSSCCCCHHHHHHHHTTCCC
T ss_pred --CHHHHHHHHHhccCCCCHHHHHHHHhhhhC
Confidence 999999999999999999999999998654
No 22
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.1e-48 Score=354.49 Aligned_cols=231 Identities=16% Similarity=0.305 Sum_probs=198.8
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC--
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~-- 78 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|++|||+.
T Consensus 50 ~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 124 (324)
T 3ln3_A 50 VDTAYAYQ---VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCT--CFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMX 124 (324)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBC
T ss_pred EECccccc---CHHHHHHHHHHhhccCCcccceeEEEeeeCCc--cCCHHHHHHHHHHHHHHhCCCcceEEEEecCcccc
Confidence 58999998 6999999888765554 79999999999864 458999999999999999999999999999975
Q ss_pred -----------------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCC--eeeeeccccccccChhh
Q 022904 79 -----------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDMRPQQ 138 (290)
Q Consensus 79 -----------------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~~~~~~~ 138 (290)
..+ ..++|++|++|+++||||+||||||++++++++++. +++ ++++|++||++.+ +.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~ 201 (324)
T 3ln3_A 125 SGDNDFPVNEQGXSLLDTVD-FCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QR 201 (324)
T ss_dssp CSSCSSCBCTTCCBCBCCCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CH
T ss_pred ccccccccccccccccccCC-HHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hH
Confidence 223 789999999999999999999999999999999986 455 8899999999876 36
Q ss_pred hHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCC
Q 022904 139 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVS 218 (290)
Q Consensus 139 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s 218 (290)
+++++|+++||++++|+||++|.+.. +... . .+.++.. +.+.++|+++|+|
T Consensus 202 ~l~~~~~~~gi~v~a~spL~~g~~~~-~~~~----~----------------------~~~~~~~--~~l~~ia~~~g~t 252 (324)
T 3ln3_A 202 XLLDYCESXDIVLVAYGALGTQRYXE-WVDQ----N----------------------SPVLLND--PVLCDVAXXNXRS 252 (324)
T ss_dssp HHHHHHHHTTCEEEEESTTSCCCCTT-TSCT----T----------------------SCCGGGC--HHHHHHHHHHTSC
T ss_pred HHHHHHHHcCCEEEEecCCCCCCccc-cccc----C----------------------CcchhcC--HHHHHHHHhhCCC
Confidence 89999999999999999999997531 1110 0 0011111 6899999999999
Q ss_pred hHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 219 IPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 219 ~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
++|+||+|+++++. ++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 253 ~aqvaL~w~l~~~~--~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~ 304 (324)
T 3ln3_A 253 PALIALRYLIQRGI--VPLAQSF--XENEMRENLQVFGFQLSPEDMXTLDGLNXNF 304 (324)
T ss_dssp HHHHHHHHHHHTTC--EEEECCS--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhCCC--EEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhcccCC
Confidence 99999999999985 4799999 9999999999999999999999999987543
No 23
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=5.2e-49 Score=355.58 Aligned_cols=239 Identities=17% Similarity=0.237 Sum_probs=201.8
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC--
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~-- 78 (290)
.|||+.|| +|+.+|++++..+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+.
T Consensus 46 ~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~ 120 (317)
T 1qwk_A 46 IDTASVYQ---NEEAIGTAIKELLEEGVVKREELFITTKAWTH--ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFN 120 (317)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHHTSCCGGGCEEEEEECTT--TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEEC
T ss_pred EEcccccc---CHHHHHHHHHHHhhcCCCChhheEEEeeeCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccc
Confidence 58999998 6999999888765444 89999999999864 457899999999999999999999999999975
Q ss_pred -------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCe
Q 022904 79 -------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 150 (290)
Q Consensus 79 -------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 150 (290)
..+ ..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||+
T Consensus 121 ~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~ 197 (317)
T 1qwk_A 121 DDMSEHIASP-VEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNIS 197 (317)
T ss_dssp TTSCSEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCE
T ss_pred cccccccCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCE
Confidence 234 789999999999999999999999999999999986 56799999999998775 5899999999999
Q ss_pred EEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhC
Q 022904 151 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQ 230 (290)
Q Consensus 151 via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~ 230 (290)
+++|+||++|.|+ ++.... ..+ .+ .. ..+.++.. +.+.++|+++|+|++|+||+|++++
T Consensus 198 v~a~spL~~G~l~-~~~~~~-~~~-~~----~~------------~~~~~~~~--~~l~~ia~~~g~s~aqvaL~w~l~~ 256 (317)
T 1qwk_A 198 VTSYATLGSPGRV-NFTLPT-GQK-LD----WA------------PAPSDLQD--QNVLALAEKTHKTPAQVLLRYALDR 256 (317)
T ss_dssp EEEESTTCSCCEE-CCBCTT-CCB-CC----CE------------ECSSGGGC--HHHHHHHHHHTCCHHHHHHHHHHHT
T ss_pred EEEecCccCCCcc-cccccc-ccc-cc----cc------------ccchhhcc--HHHHHHHHHHCcCHHHHHHHHHHhC
Confidence 9999999999876 333210 000 00 00 00112222 7899999999999999999999999
Q ss_pred CCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 231 PAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 231 ~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
+ + ++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 257 ~-~-~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 296 (317)
T 1qwk_A 257 G-C-AILPKSI--QENRIKENFEVFDFSLTEEDIAKLEESKNSQ 296 (317)
T ss_dssp T-C-EEECCCC--SHHHHHHHHCCSSCCCCHHHHHHHTTTCCCC
T ss_pred C-C-eEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHHhhcC
Confidence 8 3 7799999 9999999999999999999999999987543
No 24
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=1.1e-48 Score=347.27 Aligned_cols=220 Identities=15% Similarity=0.246 Sum_probs=190.6
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|++++.. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+.....
T Consensus 44 iDTA~~Yg---~E~~vG~al~~~--~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~ 116 (278)
T 1hw6_A 44 IDTAAIYG---NEEGVGAAIAAS--GIARDDLFITTKLWND--RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADN 116 (278)
T ss_dssp EECGGGTT---CCHHHHHHHHHH--CCCGGGCEEEEEECCC-------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSS
T ss_pred EECccccc---CHHHHHHHHHHc--CCChhhEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCC
Confidence 58999998 699999877642 2479999999999864 5578999999999999999999999999999874233
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||++++|+||++|.
T Consensus 117 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 194 (278)
T 1hw6_A 117 YVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK 194 (278)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS
T ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC
Confidence 789999999999999999999999999999999987 67889999999998876 579999999999999999999983
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
++.... +.+.++|+++|+|++|+||+|+++++ + ++|+|++
T Consensus 195 --~~~~~~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~I~g~~ 234 (278)
T 1hw6_A 195 --YDLFGA------------------------------------EPVTAAAAAHGKTPAQAVLRWHLQKG-F-VVFPKSV 234 (278)
T ss_dssp --SCCTTS------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-BBCCCCC
T ss_pred --cccccc------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEcCCC
Confidence 110000 68899999999999999999999996 4 6799999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++...
T Consensus 235 --~~~~l~en~~~~~~~L~~~~~~~l~~~~~~ 264 (278)
T 1hw6_A 235 --RRERLEENLDVFDFDLTDTEIAAIDAMDPG 264 (278)
T ss_dssp --SHHHHHHHHCCSSCCCCHHHHHHHHTTCC-
T ss_pred --CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 999999999999999999999999998654
No 25
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=1.9e-48 Score=351.88 Aligned_cols=230 Identities=17% Similarity=0.304 Sum_probs=198.3
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|++++..+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+..
T Consensus 43 iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 117 (316)
T 1us0_A 43 IDCAHVYQ---NENEVGVAIQEKLREQVVKREELFIVSKLWCT--YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFK 117 (316)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBC
T ss_pred EEcccccC---CHHHHHHHHHHHHhcCCCChhHeEEEEeeCCC--cCCHHHHHHHHHHHHHHhCCCceeeEEEecCcccc
Confidence 58999998 6999999988765555 79999999999864 4589999999999999999999999999999641
Q ss_pred -----------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CC--CeeeeeccccccccChhhh
Q 022904 80 -----------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 80 -----------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~~~~~~ 139 (290)
.....++|++|++|+++||||+||||||++++++++++. .+ +|+++|++||++.+. .+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~ 195 (316)
T 1us0_A 118 PGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EK 195 (316)
T ss_dssp CSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HH
T ss_pred ccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HH
Confidence 113689999999999999999999999999999999986 56 789999999998764 58
Q ss_pred HHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCCh
Q 022904 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~ 219 (290)
++++|+++||++++|+||++|.|+ +..... | +++. .+.+.++|+++|+|+
T Consensus 196 l~~~~~~~gI~v~a~spL~~G~l~--~~~~~~--~------------------------~~~~--~~~l~~ia~~~g~s~ 245 (316)
T 1us0_A 196 LIQYCQSKGIVVTAYSPLGSPDRP--WAKPED--P------------------------SLLE--DPRIKAIAAKHNKTT 245 (316)
T ss_dssp HHHHHHHTTCEEEEESTTCCTTCT--TCCTTS--C------------------------CTTT--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHcCCEEEEecccccCccc--cccCCC--c------------------------cccc--CHHHHHHHHHhCCCH
Confidence 999999999999999999999762 211100 0 0111 178899999999999
Q ss_pred HHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 220 ~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 246 aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 295 (316)
T 1us0_A 246 AQVLIRFPMQRN-L-VVIPKSV--TPERIAENFKVFDFELSSQDMTTLLSYNRN 295 (316)
T ss_dssp HHHHHHHHHHTT-C-EECCBCC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHCC-C-EEEeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhccC
Confidence 999999999998 3 7799999 999999999999999999999999998654
No 26
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.2e-48 Score=351.44 Aligned_cols=232 Identities=19% Similarity=0.379 Sum_probs=197.3
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCC---
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD--- 77 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~--- 77 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+
T Consensus 43 ~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~ 117 (316)
T 3o3r_A 43 FDCAYVYQ---NESEVGEAIQEKIKEKAVRREDLFIVSKLWST--FFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQ 117 (316)
T ss_dssp EECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBC
T ss_pred EEccCccC---CHHHHHHHHHHHHhhCCCChHHcEEEeeeCCC--cCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCcccc
Confidence 58999998 6999999888765443 79999999999864 45899999999999999999999999999996
Q ss_pred ----------------CCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CC--CeeeeeccccccccChhh
Q 022904 78 ----------------YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQ 138 (290)
Q Consensus 78 ----------------~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~~~~~ 138 (290)
...+ ..++|++|++|+++||||+||||||+.++++++++. ++ +++++|++||++.+ +.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~ 194 (316)
T 3o3r_A 118 AGKEFLPKDSQGKVLMSKST-FLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QE 194 (316)
T ss_dssp CSSCSSCBCTTSCBCBCSCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CH
T ss_pred Cccccccccccccccccccc-HHHHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hH
Confidence 2334 789999999999999999999999999999999986 33 58999999999776 36
Q ss_pred hHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCC
Q 022904 139 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVS 218 (290)
Q Consensus 139 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s 218 (290)
+++++|+++||++++|+||++|... +.. + . .+.++.. +.+.++|+++|+|
T Consensus 195 ~l~~~~~~~gi~v~a~spL~~G~~~--~~~-----~-~--------------------~~~~~~~--~~l~~ia~~~g~t 244 (316)
T 3o3r_A 195 KLIQYCHSKGIAVIAYSPLGSPDRP--YAK-----P-E--------------------DPVVLEI--PKIKEIAAKHKKT 244 (316)
T ss_dssp HHHHHHHTTTCEEEEECTTCCTTCT--TCC-----T-T--------------------SCCSTTC--HHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCEEEEecccCCCCCc--ccc-----c-c--------------------chhhhcC--HHHHHHHHHhCCC
Confidence 8999999999999999999998311 000 0 0 0011111 6899999999999
Q ss_pred hHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCC
Q 022904 219 IPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 276 (290)
Q Consensus 219 ~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~~ 276 (290)
++|+||+|+++++. ++|+|++ +++||++|+++++++||+++++.|+++....+.
T Consensus 245 ~aqvaL~w~l~~~~--~vi~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~ 298 (316)
T 3o3r_A 245 IAQVLIRFHVQRNV--AVIPKSV--TLSHIKENIQVFDFQLSEEDMAAILSLNRNWRA 298 (316)
T ss_dssp HHHHHHHHHHTTTC--EECCBCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHhCCC--EEeCCCC--CHHHHHHHHhhCCCCcCHHHHHHHHccccCCcc
Confidence 99999999999985 4799999 999999999999999999999999998755443
No 27
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=2e-48 Score=353.70 Aligned_cols=231 Identities=18% Similarity=0.271 Sum_probs=199.3
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+..
T Consensus 49 iDTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~ 123 (331)
T 1s1p_A 49 IDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTSKLWST--FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLK 123 (331)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBC
T ss_pred EEcccccc---CHHHHHHHHHHHHhcCCCCchheEEEeccCCc--cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccC
Confidence 58999998 6999999888765444 79999999999864 4589999999999999999999999999999531
Q ss_pred -----------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CC--CeeeeeccccccccChhhh
Q 022904 80 -----------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 80 -----------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~~~~~~ 139 (290)
.....++|++|++|+++||||+||||||++++++++++. ++ +|+++|++||++.+. .+
T Consensus 124 ~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~ 201 (331)
T 1s1p_A 124 PGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SK 201 (331)
T ss_dssp CSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HH
T ss_pred CCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HH
Confidence 113689999999999999999999999999999999987 56 789999999998765 57
Q ss_pred HHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCCh
Q 022904 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~ 219 (290)
++++|+++||++++|+||++|.|++ +... .. ++++.. +.+.++|+++|+|+
T Consensus 202 l~~~~~~~gI~v~a~spL~~G~l~~-~~~~---~~-----------------------~~~~~~--~~l~~ia~~~g~s~ 252 (331)
T 1s1p_A 202 LLDFCKSKDIVLVAYSALGSQRDKR-WVDP---NS-----------------------PVLLED--PVLCALAKKHKRTP 252 (331)
T ss_dssp HHHHHHHTTCEEEEESTTSCCCCTT-TSCT---TS-----------------------CCGGGC--HHHHHHHHHHTSCH
T ss_pred HHHHHHHcCCEEEEeccccCCcccc-cccC---CC-----------------------cccccC--HHHHHHHHHhCCCH
Confidence 9999999999999999999998865 2211 00 011111 78999999999999
Q ss_pred HHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 220 ~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 253 aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 302 (331)
T 1s1p_A 253 ALIALRYQLQRG-V-VVLAKSY--NEQRIRQNVQVFEFQLTAEDMKAIDGLDRN 302 (331)
T ss_dssp HHHHHHHHHHTT-C-EEEEECC--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCC-C-EEeeCCC--CHHHHHHHhhhcCCCcCHHHHHHHHHHhcC
Confidence 999999999998 3 6799999 999999999999999999999999998654
No 28
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2e-48 Score=345.79 Aligned_cols=216 Identities=16% Similarity=0.286 Sum_probs=193.9
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| +|+.+|++++.. ..+|+++||+||+++. +.+++.+++++++||++||+||||+|++|||+ ..+
T Consensus 51 iDTA~~Yg---~E~~vG~al~~~--~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~- 121 (281)
T 1vbj_A 51 IDTAAIYK---NEESAGRAIASC--GVPREELFVTTKLWNS--DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDK- 121 (281)
T ss_dssp EECCGGGT---CHHHHHHHHHHS--SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSC-
T ss_pred EECCcccC---CHHHHHHHHHhc--CCChhHEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCC-
Confidence 58999998 699999876542 2379999999999864 56899999999999999999999999999998 445
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||++++|+||++|.
T Consensus 122 ~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 199 (281)
T 1vbj_A 122 FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGH 199 (281)
T ss_dssp HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGT
T ss_pred HHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCC
Confidence 789999999999999999999999999999999986 67789999999998875 479999999999999999999984
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
+.. . +.+.++|+++|+|++|+||+|+++++ + ++|+|++
T Consensus 200 ~~~---------~-------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g~~ 237 (281)
T 1vbj_A 200 LVE---------D-------------------------------ARLKAIGGKYGKTAAQVMLRWEIQAG-V-ITIPKSG 237 (281)
T ss_dssp TTT---------C-------------------------------HHHHHHHHTTTCCHHHHHHHHHHHTT-C-EECCBCS
T ss_pred CCC---------C-------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEecCCC
Confidence 311 0 68899999999999999999999996 4 5799999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++...
T Consensus 238 --~~~~l~en~~a~~~~L~~e~~~~l~~~~~~ 267 (281)
T 1vbj_A 238 --NEARIKENGNIFDFELTAEDIQVIDGMNAG 267 (281)
T ss_dssp --CHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred --CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 999999999999999999999999998654
No 29
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1.6e-48 Score=351.64 Aligned_cols=225 Identities=20% Similarity=0.309 Sum_probs=197.2
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC--
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~-- 78 (290)
.|||+.|| +|+.+|++++..+..+ +|+++||+||+++. +++++.+++++++||++||+||||+|+||||+.
T Consensus 52 iDTA~~Yg---sE~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 126 (312)
T 1zgd_A 52 FDTAAAYG---SEQALGEALKEAIELGLVTRDDLFVTSKLWVT--ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQ 126 (312)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEEC
T ss_pred EECccccC---CHHHHHHHHHHHHhcCCCcchheEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccc
Confidence 58999998 7999999988765555 79999999999864 457899999999999999999999999999964
Q ss_pred --------------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHH
Q 022904 79 --------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAEL 143 (290)
Q Consensus 79 --------------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~ 143 (290)
..+ ..++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++++. .+++++
T Consensus 127 ~~~~~~~~~~~~~~~~~-~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~ 203 (312)
T 1zgd_A 127 PGKFSFPIDVADLLPFD-VKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREF 203 (312)
T ss_dssp TTCCCSSEEGGGEECCC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHH
T ss_pred Ccccccccccccccccc-HHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHH
Confidence 123 789999999999999999999999999999999986 56899999999998875 579999
Q ss_pred HHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHH
Q 022904 144 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVA 223 (290)
Q Consensus 144 ~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~a 223 (290)
|+++||++++|+||++|.+.+. +. .+. .+.+.++|+++|+|++|+|
T Consensus 204 ~~~~gi~v~a~spl~~G~~~~~------~~--------------------------~~~--~~~l~~ia~~~g~s~aqva 249 (312)
T 1zgd_A 204 CNAHGIVLTAFSPVRKGASRGP------NE--------------------------VME--NDMLKEIADAHGKSVAQIS 249 (312)
T ss_dssp HHHTTCEEEEESTTTTTTTTSS------CT--------------------------TTT--CHHHHHHHHHHTSCHHHHH
T ss_pred HHHcCCEEEEecCCCCCCCCCC------cc--------------------------ccc--cHHHHHHHHHcCCCHHHHH
Confidence 9999999999999998864320 00 011 1688999999999999999
Q ss_pred HHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 224 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 224 l~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
|+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 250 L~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 295 (312)
T 1zgd_A 250 LRWLYEQG-V-TFVPKSY--DKERMNQNLRIFDWSLTKEDHEKIAQIKQN 295 (312)
T ss_dssp HHHHHHTT-C-EECCCCC--SHHHHHHTTCCSSCCCCHHHHHHHTTSCCC
T ss_pred HHHHHHCC-C-EEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcc
Confidence 99999996 4 6799999 999999999999999999999999998643
No 30
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=2.4e-48 Score=353.53 Aligned_cols=232 Identities=18% Similarity=0.252 Sum_probs=198.2
Q ss_pred cccccccCCChhhHHhhhchHHHhhh---C-CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVER---G-HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~---~-~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~ 78 (290)
.|||+.|| +|+.+|++++++++. + +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+.
T Consensus 55 ~DTA~~Yg---sE~~vG~al~~~~~~~~~g~~R~~v~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~ 129 (334)
T 3krb_A 55 IDCAYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWITSKLWNY--NHRPELVREQCKKTMSDLQVDYLDLFLVHWPLA 129 (334)
T ss_dssp EECCGGGS---CHHHHHHHHHHHHHCTTSSCCGGGCEEEEEECGG--GCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCC
T ss_pred EECccccc---CHHHHHHHHHHHhhhccCCCChhhEEEEeeeCCC--CCCHHHHHHHHHHHHHHcCCCceeEEEEccccc
Confidence 58999999 899999988876655 5 89999999999864 458899999999999999999999999999943
Q ss_pred C---------------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccCh
Q 022904 79 S---------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRP 136 (290)
Q Consensus 79 ~---------------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~ 136 (290)
. .+ ..++|++|++|+++||||+||||||+++++.++++. +++++++|++||++++.
T Consensus 130 ~~~~~~~~~~~~d~~g~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~- 207 (334)
T 3krb_A 130 FVRNDVGDLFPKDAEGRAMLEKVP-LADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN- 207 (334)
T ss_dssp BCCCTTCCSSCBCTTSCBCBCCCC-HHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC-
T ss_pred cccccccccCcccccccccccCCC-HHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc-
Confidence 1 23 789999999999999999999999999999999987 67899999999998764
Q ss_pred hhhHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcC
Q 022904 137 QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHG 216 (290)
Q Consensus 137 ~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g 216 (290)
.+++++|+++||++++|+||++|+|++++.... . .++++.. +.+.++|+++|
T Consensus 208 -~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~--------~-----------------~~~~~~~--~~l~~iA~~~g 259 (334)
T 3krb_A 208 -DATVKFCLDNGIGVTAYSPMGGSYADPRDPSGT--------Q-----------------KNVILEC--KTLKAIADAKG 259 (334)
T ss_dssp -HHHHHHHHHTTCEEEEESTTCCSBC-------C--------C-----------------BCGGGGC--HHHHHHHHHHT
T ss_pred -HHHHHHHHHcCCEEEEEecCCCCcccCCCCCCC--------c-----------------ccchhcc--HHHHHHHHHhC
Confidence 689999999999999999999999987653210 0 0011111 78999999999
Q ss_pred CChHHHHH-----HHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 217 VSIPVVAV-----RYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 217 ~s~~~~al-----~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
+|++|+|| +|+++ + .++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 260 ~s~aqvaLaw~~~~w~l~-~--~~vI~gs~--~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 260 TSPHCVALAWHVKKWNTS-M--YSVIPKSQ--TPARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp SCHHHHHHHHHHHHSCST-T--EEECCBCS--SHHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred cCHHHhHHhhHhhhhhcC-C--eEEeeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 99999999 77777 3 57799999 9999999999999999999999999998765
No 31
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=4.8e-48 Score=350.05 Aligned_cols=234 Identities=18% Similarity=0.223 Sum_probs=197.3
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|+++++.+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+..
T Consensus 46 iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 120 (322)
T 1mi3_A 46 FDGAEDYG---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNN--YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFK 120 (322)
T ss_dssp EECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBC
T ss_pred EEcccccc---CHHHHHHHHHHHhhcCCCChhhEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccc
Confidence 58999998 6999999888765555 89999999999864 4589999999999999999999999999999531
Q ss_pred -----------------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccC
Q 022904 80 -----------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMR 135 (290)
Q Consensus 80 -----------------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~ 135 (290)
...+.++|++|++|+++||||+||||||+.++++++++. +++++++|++||++.+.
T Consensus 121 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~ 200 (322)
T 1mi3_A 121 FVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ 200 (322)
T ss_dssp CCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC
T ss_pred cCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc
Confidence 113689999999999999999999999999999999987 67899999999998764
Q ss_pred hhhhHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHc
Q 022904 136 PQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKH 215 (290)
Q Consensus 136 ~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~ 215 (290)
.+++++|+++||++++|+||++|.+...-... + + ..++++. .+.+.++|+++
T Consensus 201 --~~l~~~~~~~gi~v~a~spL~~G~~~~~~~~~--~-----------------~-----~~~~~~~--~~~l~~iA~~~ 252 (322)
T 1mi3_A 201 --PKLIEFAQKAGVTITAYSSFGPQSFVEMNQGR--A-----------------L-----NTPTLFA--HDTIKAIAAKY 252 (322)
T ss_dssp --HHHHHHHHHTTCEEEEECTTTTHHHHTTTCHH--H-----------------H-----TSCCTTS--CHHHHHHHHHH
T ss_pred --HHHHHHHHHcCCEEEEECCCCCCCcccccccc--c-----------------c-----cCccccc--CHHHHHHHHHc
Confidence 58999999999999999999999432100000 0 0 0001111 16889999999
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 253 g~t~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 306 (322)
T 1mi3_A 253 NKTPAEVLLRWAAQRG-I-AVIPKSN--LPERLVQNRSFNTFDLTKEDFEEIAKLDIG 306 (322)
T ss_dssp TCCHHHHHHHHHHTTT-C-EECCCCC--SHHHHHHTTSCCSSCCCHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHhCC-C-EEEcCCC--CHHHHHHHHhhcCCCcCHHHHHHHHhhccc
Confidence 9999999999999998 4 7799999 999999999999999999999999998643
No 32
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=6.3e-48 Score=344.98 Aligned_cols=219 Identities=15% Similarity=0.240 Sum_probs=194.6
Q ss_pred cccccccCCChhhHHhhhchHHHhhh-C-CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVER-G-HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN 80 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~-~-~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~ 80 (290)
.|||+.|| +|+.+|+++++.+.. + +|+++||+||+++. +.+++.+++++++||++||+||||+|+||||+.
T Consensus 56 ~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~-- 128 (298)
T 1vp5_A 56 IDTAASYM---NEEGVGRAIKRAIDEGIVRREELFVTTKLWVS--DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG-- 128 (298)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--
T ss_pred EECCCccc---CHHHHHHHHHHhhhccCCChhhEEEEeccCCC--CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--
Confidence 58999998 699999988764332 2 79999999999763 457899999999999999999999999999986
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccc
Q 022904 81 PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 81 ~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
+ ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++++|+||++
T Consensus 129 ~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~ 205 (298)
T 1vp5_A 129 D-VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAE 205 (298)
T ss_dssp C-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGG
T ss_pred C-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEeccccc
Confidence 4 789999999999999999999999999999999987 67889999999998876 4799999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeec
Q 022904 160 GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 239 (290)
Q Consensus 160 G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g 239 (290)
|. ++.... +.+.++|+++|+|++|+||+|+++++ + ++|+|
T Consensus 206 G~--~~~l~~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g 245 (298)
T 1vp5_A 206 GR--KNIFQN------------------------------------GVLRSIAEKYGKTVAQVILRWLTQKG-I-VAIPK 245 (298)
T ss_dssp GG--GGGGGC------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCC
T ss_pred CC--ccccCc------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeC
Confidence 83 100000 68899999999999999999999997 4 67999
Q ss_pred CCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 240 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 240 ~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
++ +++||++|+++++++||+++++.|+++...
T Consensus 246 ~~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~ 277 (298)
T 1vp5_A 246 TV--RRERMKENISIFDFELTQEDMEKIATLDEG 277 (298)
T ss_dssp CS--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCS
T ss_pred CC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 99 999999999999999999999999998654
No 33
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=5.8e-48 Score=344.49 Aligned_cols=219 Identities=19% Similarity=0.300 Sum_probs=195.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCcc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG 82 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~ 82 (290)
.|||+.|| ||+.+|++++.. ..+|++++|+||++.. ..+++.+++++++||+|||+||||||+||||+.. +
T Consensus 55 ~DTA~~Yg---sE~~vG~~l~~~--~~~r~~~~i~tk~~~~--~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~-~- 125 (290)
T 4gie_A 55 IDTAYIYS---NERGVGQGIRES--GVPREEVWVTTKVWNS--DQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK-K- 125 (290)
T ss_dssp EECCGGGT---CHHHHHHHHHHH--CCCGGGSEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS-S-
T ss_pred EecccccC---CHHHHHHHHHhc--CCcchhcccccccccc--CCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC-c-
Confidence 58999998 899999877644 4589999999999864 4578999999999999999999999999999764 3
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 83 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
..++|++|++|+++||||+||||||+++++.++... .+++.++|+++++. ..+.+++++|+++||++++|+||++|.
T Consensus 126 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~--~~~~~l~~~~~~~gi~~~a~spl~~G~ 203 (290)
T 4gie_A 126 FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPL--FQQRTLREFCKQHNIAITAWSPLGSGE 203 (290)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTT--BCCHHHHHHHHHTTCEEEEESTTCSSG
T ss_pred chHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEecccc--chhHHHHHHHHHcCceEeeeccccccc
Confidence 579999999999999999999999999999999887 56788888888874 445689999999999999999999998
Q ss_pred ccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCC
Q 022904 162 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVR 241 (290)
Q Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~ 241 (290)
|++.... +.+.++|+++|+|++|+||+|++++|.| +|+|++
T Consensus 204 l~~~~~~-------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G~~ 244 (290)
T 4gie_A 204 EAGILKN-------------------------------------HVLGEIAKKHNKSPAQVVIRWDIQHGIV--TIPKST 244 (290)
T ss_dssp GGCGGGC-------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCC
T ss_pred ccccchh-------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEECCC
Confidence 8654222 6889999999999999999999999965 599999
Q ss_pred CCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 242 LGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 242 ~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+++||++|+++++++||+++++.|+++.+.
T Consensus 245 --~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~ 274 (290)
T 4gie_A 245 --NKGRIQENFNVWDFKLTEEEMRQIDELNED 274 (290)
T ss_dssp --SHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred --CHHHHHHHHhhcCCCCCHHHHHHHhccCCC
Confidence 999999999999999999999999998643
No 34
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=7.7e-48 Score=350.22 Aligned_cols=226 Identities=19% Similarity=0.254 Sum_probs=196.8
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|+++++..+.+ +|+++||+||+++. +.+++.+++++++||++||+||||+|+||||+..
T Consensus 66 ~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~ 140 (335)
T 3h7u_A 66 IDCAQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSKLWCT--DHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIK 140 (335)
T ss_dssp EECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEEC
T ss_pred EECCcccC---CHHHHHHHHHHHHhcCCCCcceeEEEeeeCCC--CCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccc
Confidence 58999998 8999999988765544 79999999999764 4578999999999999999999999999999642
Q ss_pred -------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHH
Q 022904 80 -------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQ 145 (290)
Q Consensus 80 -------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~ 145 (290)
.+ .+++|++|++|+++||||+||||||++++++++++. .++++++|++||++++. .+++++|+
T Consensus 141 ~~~~~~~~~~~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~ 217 (335)
T 3h7u_A 141 KGSVGIKPENLLPVD-IPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCK 217 (335)
T ss_dssp SSCSSCCGGGEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHH
T ss_pred cccccccccccccCC-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHH
Confidence 23 689999999999999999999999999999999887 67899999999998775 58999999
Q ss_pred HhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHH
Q 022904 146 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVR 225 (290)
Q Consensus 146 ~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~ 225 (290)
++||++++|+||++|.+.- .. .+.+.. +.+.++|+++|+|++|+||+
T Consensus 218 ~~gI~v~a~sPL~~g~~~~--~~-----------------------------~~~~~~--~~l~~iA~~~g~t~aqvaL~ 264 (335)
T 3h7u_A 218 SKGVHLSAYSPLGSPGTTW--LK-----------------------------SDVLKN--PILNMVAEKLGKSPAQVALR 264 (335)
T ss_dssp HHTCEEEEESTTCCTTCTT--SC-----------------------------CCGGGC--HHHHHHHHHHTCCHHHHHHH
T ss_pred HCCCEEEEeccCcCCCCCC--CC-----------------------------cccccc--HHHHHHHHHHCcCHHHHHHH
Confidence 9999999999998763210 00 001111 68999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 226 YILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 226 ~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
|+++++ .++|+|++ +++||++|+++++++||++++++|+++...
T Consensus 265 w~l~~~--~~vI~g~~--~~~~l~enl~a~~~~L~~e~~~~i~~l~~~ 308 (335)
T 3h7u_A 265 WGLQMG--HSVLPKST--NEGRIKENFNVFDWSIPDYMFAKFAEIEQA 308 (335)
T ss_dssp HHHHTT--CEECCBCS--CHHHHHHHHCCSSCCCCHHHHHHGGGSCCC
T ss_pred HHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhHhhc
Confidence 999998 46799999 999999999999999999999999998643
No 35
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=4.9e-48 Score=350.88 Aligned_cols=226 Identities=17% Similarity=0.262 Sum_probs=197.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC--CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG--HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 79 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~--~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~- 79 (290)
.|||+.|| +|+.+|+++++....+ +|+++||+||+++. +.+++.+++++++||++||+||||+|+||||+..
T Consensus 62 ~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~ 136 (331)
T 3h7r_A 62 IDCASIYG---NEKEIGGVLKKLIGDGFVKREELFITSKLWSN--DHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLK 136 (331)
T ss_dssp EECCGGGS---CHHHHHHHHHHHHHTTSSCGGGCEEEEEECGG--GCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEEC
T ss_pred EECccccC---CHHHHHHHHHHHhhcCCCCchhEEEEEeeCCC--CCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccc
Confidence 58999998 8999999888765544 79999999999864 4578999999999999999999999999999642
Q ss_pred -------------CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHH
Q 022904 80 -------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQ 145 (290)
Q Consensus 80 -------------~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~ 145 (290)
.+ ..++|++|++|+++||||+||||||+.++++++++. .++++++|++||++.+. .+++++|+
T Consensus 137 ~~~~~~~~~~~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~ 213 (331)
T 3h7r_A 137 KESLMPTPEMLTKPD-ITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCK 213 (331)
T ss_dssp TTCSSCCGGGEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHH
T ss_pred cccccccccccccCC-HHHHHHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHH
Confidence 33 689999999999999999999999999999999887 67899999999998775 58999999
Q ss_pred HhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHH
Q 022904 146 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVR 225 (290)
Q Consensus 146 ~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~ 225 (290)
++||++++|+||++|-.. +...+.+.. +.+.++|+++|+|++|+||+
T Consensus 214 ~~gI~v~a~spL~~g~~~-------------------------------~~~~~~~~~--~~l~~iA~~~g~t~aqvaL~ 260 (331)
T 3h7r_A 214 SKGVHLSGYSPLGSQSKG-------------------------------EVRLKVLQN--PIVTEVAEKLGKTTAQVALR 260 (331)
T ss_dssp HHTCEEEEESTTSCSCTT-------------------------------TTTHHHHTC--HHHHHHHHHHTCCHHHHHHH
T ss_pred HCCCEEEEeCCCCCCCCC-------------------------------CCccchhcC--HHHHHHHHHHCcCHHHHHHH
Confidence 999999999999876210 000111222 78999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 226 YILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 226 ~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
|++++| .++|+|++ +++||++|+++++++||+++++.|+++..+
T Consensus 261 w~l~~~--~~vI~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~ 304 (331)
T 3h7r_A 261 WGLQTG--HSVLPKSS--SGARLKENLDVFDWSIPEDLFTKFSNIPQE 304 (331)
T ss_dssp HHHHTT--CEECCCCS--CHHHHHHHTCCSSCCCCHHHHGGGGGSCCC
T ss_pred HHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHHhhhc
Confidence 999998 46799999 999999999999999999999999998653
No 36
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=8e-48 Score=344.00 Aligned_cols=217 Identities=17% Similarity=0.295 Sum_probs=192.0
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCC-Cc
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NP 81 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~-~~ 81 (290)
.|||+.|| +|+.+|+++++. ..+|+++||+||+++.. . +.+++++++||++||+||||+|++|||+.. .+
T Consensus 66 ~DTA~~Yg---~E~~vG~al~~~--~~~R~~v~I~TK~~~~~--~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~ 136 (296)
T 1mzr_A 66 IDTAAAYK---NEEGVGKALKNA--SVNREELFITTKLWNDD--H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDH 136 (296)
T ss_dssp EECCGGGT---CHHHHHHHHHHS--CSCGGGCEEEEEECGGG--T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCC
T ss_pred EECCcccc---CHHHHHHHHHhc--CCCcccEEEEeccCCCc--H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCC
Confidence 58999998 699999877642 23799999999998642 2 889999999999999999999999999874 44
Q ss_pred cHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEeccccccc
Q 022904 82 GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 82 ~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
..++|++|++|+++||||+||||||++++++++++. +++++++|++||++++. .+++++|+++||++++|+||++|
T Consensus 137 -~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 213 (296)
T 1mzr_A 137 -YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQG 213 (296)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTT
T ss_pred -HHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCC
Confidence 789999999999999999999999999999999986 77889999999998875 47999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecC
Q 022904 161 LLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGV 240 (290)
Q Consensus 161 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~ 240 (290)
.+. ... . +.+.++|+++|+|++|+||+|+++++ + ++|+|+
T Consensus 214 ~~~--~l~-----~-------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g~ 253 (296)
T 1mzr_A 214 GKG--VFD-----Q-------------------------------KVIRDLADKYGKTPAQIVIRWHLDSG-L-VVIPKS 253 (296)
T ss_dssp CTT--TTT-----S-------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCBC
T ss_pred cch--hcC-----h-------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeCC
Confidence 431 000 0 68899999999999999999999996 4 579999
Q ss_pred CCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 241 RLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 241 ~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
+ +++||++|+++++++||+++++.|+++...
T Consensus 254 ~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~ 284 (296)
T 1mzr_A 254 V--TPSRIAENFDVWDFRLDKDELGEIAKLDQG 284 (296)
T ss_dssp C--CHHHHHHTTCCSSCCCCHHHHHHHHTTCCC
T ss_pred C--CHHHHHHHHhhcCCCCCHHHHHHHHHhhhc
Confidence 9 999999999999999999999999998654
No 37
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.7e-47 Score=348.66 Aligned_cols=222 Identities=15% Similarity=0.268 Sum_probs=195.9
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC-CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC---
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG-HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY--- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~-~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~--- 78 (290)
.|||+.|| +|+.+|++|+..+..+ +|+++||+||+++. ..+++.+++++++||++||+||||+|+||||+.
T Consensus 78 iDTA~~Yg---~E~~vG~al~~~~~~g~~R~~v~I~TK~~~~--~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~ 152 (344)
T 2bgs_A 78 VDTAAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCT--NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKD 152 (344)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHTTCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECT
T ss_pred EECCCccC---CHHHHHHHHHHhhhcCCCcccEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCcccc
Confidence 58999998 6999999888765444 89999999999863 458999999999999999999999999999963
Q ss_pred ------------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHH
Q 022904 79 ------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQ 145 (290)
Q Consensus 79 ------------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~ 145 (290)
..+ ..++|++|++|+++||||+||||||++++++++++. +++++++|++||++.+. .+++++|+
T Consensus 153 ~~~~~~~~~~~~~~~-~~e~~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~ 229 (344)
T 2bgs_A 153 GAHMPPEAGEVLEFD-MEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACK 229 (344)
T ss_dssp TCCSSCCTTCEECCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHH
T ss_pred ccccccccccccCCC-HHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHH
Confidence 123 789999999999999999999999999999999987 67899999999998764 58999999
Q ss_pred HhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHH
Q 022904 146 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVR 225 (290)
Q Consensus 146 ~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~ 225 (290)
++||++++|+||++|- |.. +. .+.+.++|+++|+|++|+||+
T Consensus 230 ~~gI~v~a~spL~~G~----------~~~--------------------------~~--~~~l~~iA~~~g~s~aqvaL~ 271 (344)
T 2bgs_A 230 KHGIHITAYSPLGSSE----------KNL--------------------------AH--DPVVEKVANKLNKTPGQVLIK 271 (344)
T ss_dssp HTTCEEEEESTTCTTT----------TCC--------------------------TT--CHHHHHHHHHHTCCHHHHHHH
T ss_pred HCCCEEEEeCcccCCC----------chh--------------------------hc--cHHHHHHHHHhCCCHHHHHHH
Confidence 9999999999999871 000 00 068899999999999999999
Q ss_pred HHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022904 226 YILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 274 (290)
Q Consensus 226 ~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~ 274 (290)
|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++..+.
T Consensus 272 w~l~~~-~-~vI~gs~--~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~ 316 (344)
T 2bgs_A 272 WALQRG-T-SVIPKSS--KDERIKENIQVFGWEIPEEDFKVLCSIKDEK 316 (344)
T ss_dssp HHHHHT-C-EECCBCS--SHHHHHHTTCCSSCCCCHHHHHHHHHSCTTC
T ss_pred HHHhCC-C-eEEECCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHhhcC
Confidence 999998 3 7799999 9999999999999999999999999987653
No 38
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-47 Score=342.96 Aligned_cols=218 Identities=21% Similarity=0.345 Sum_probs=194.4
Q ss_pred cccccccCCChhhHHhhhchHHHhhh--CCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVER--GHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN 80 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~--~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~ 80 (290)
.|||+.|| +|+.+|+++++.+.. ..|+.++|+||.++. +.+++.+++++++||++||+||||||++|+|+...
T Consensus 82 ~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~--~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~~ 156 (314)
T 3b3d_A 82 IDTAAIYG---NEAGVGEGIREGIEEAGISREDLFITSKVWNA--DLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK 156 (314)
T ss_dssp EECCGGGT---CHHHHHHHHHHHHHHHTCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTT
T ss_pred EECccccC---ChHHHHHHHHHHHHHhCCCcccccccccCcCC--CCCHHHHHHHHHHHHHHhCCCcccccccccccccc
Confidence 58999998 799999988876544 389999999999864 56899999999999999999999999999998654
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccc
Q 022904 81 PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 81 ~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
..++|++|++|+++||||+||||||+.+++.++.+. .+++.++|+++++ +..+.+++++|+++||++++|+||++
T Consensus 157 --~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~--~~~~~~ll~~c~~~gI~v~a~sPL~~ 232 (314)
T 3b3d_A 157 --YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHP--RLTQKELIRYCQNQGIQMEAWSPLMQ 232 (314)
T ss_dssp --HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBT--TBCCHHHHHHHHHHTCEEEEESTTGG
T ss_pred --hhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEecccc--ccchHHHHHHHHHcCCEEEEeccccC
Confidence 479999999999999999999999999999999886 5667777766665 66667899999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeec
Q 022904 160 GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 239 (290)
Q Consensus 160 G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g 239 (290)
|.|++. ..+.++|+++|+|++|+||+|++++|.| +|+|
T Consensus 233 G~L~~~----------------------------------------~~~~~ia~~~g~t~aqvaL~w~l~~~~v--~I~G 270 (314)
T 3b3d_A 233 GQLLDH----------------------------------------PVLADIAQTYNKSVAQIILRWDLQHGII--TIPK 270 (314)
T ss_dssp GTTTTC----------------------------------------HHHHHHHHHTTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred CcccCc----------------------------------------hhhHHHHHHcCCCHHHHHHHHHHhCCCE--EEEC
Confidence 998753 5678899999999999999999999975 5999
Q ss_pred CCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022904 240 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 273 (290)
Q Consensus 240 ~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~ 273 (290)
++ +++||+||+++++++||++++++|+++.+.
T Consensus 271 ~~--~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~ 302 (314)
T 3b3d_A 271 ST--KEHRIKENASVFDFELTQDDMNRIDALNEN 302 (314)
T ss_dssp CC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred CC--CHHHHHHHHHhcCCCCCHHHHHHHhccCCC
Confidence 99 999999999999999999999999998543
No 39
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=3.7e-47 Score=344.55 Aligned_cols=231 Identities=17% Similarity=0.273 Sum_probs=201.8
Q ss_pred cccccccCCChhhHHhhhchHHHhhhC---CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCC-
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERG---HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY- 78 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~---~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~- 78 (290)
.|||+.|| ||+.+|+++++..... .|+++++++|.++. +.+++.+++++++||++||+||||||++|||+.
T Consensus 43 ~DTA~~Yg---sE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~ 117 (324)
T 4gac_A 43 IDCASVYG---NETEIGEALKESVGSGKAVPREELFVTSKLWNT--KHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAF 117 (324)
T ss_dssp EECCGGGS---CHHHHHHHHHHHBSTTSSBCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEE
T ss_pred EECCcccC---CHHHHHHHHHhhhcccceecccccccccccCCC--CCCHHHHHHHHHHHHHHhCCCccceeeeccCccc
Confidence 58999998 7999999998765432 68999999999764 558999999999999999999999999999963
Q ss_pred ------------------CCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhh
Q 022904 79 ------------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 139 (290)
Q Consensus 79 ------------------~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~ 139 (290)
..+ ++++|++|++|+++||||+||+|||++++++++... .+++.++|++||+... +.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~ 194 (324)
T 4gac_A 118 ERGDNPFPKNADGTVRYDSTH-YKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNE 194 (324)
T ss_dssp CSSSCSSCBCTTSCBCEECCC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHH
T ss_pred ccccccccccccCccccCCCC-HHHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHH
Confidence 233 789999999999999999999999999999999887 6789999999999654 468
Q ss_pred HHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCCh
Q 022904 140 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 219 (290)
Q Consensus 140 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~ 219 (290)
++++|+++||++++|+||++|.+++++... + .+.. .+.+.++|+++|+|+
T Consensus 195 l~~~~~~~gi~~~a~spL~~g~~~~~~~~~----~------------------------~~~~--~~~l~~iA~~~g~t~ 244 (324)
T 4gac_A 195 LIAHCHARGLEVTAYSPLGSSDRAWRHPDE----P------------------------VLLE--EPVVLALAEKHGRSP 244 (324)
T ss_dssp HHHHHHHHTCEEEEESTTCCGGGGGGSTTS----C------------------------CGGG--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHhceeeeecCCcccCccccCCCCC----c------------------------chhh--HHHHHHHHHHhCCCH
Confidence 999999999999999999999998765432 0 0111 167899999999999
Q ss_pred HHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022904 220 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 220 ~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~ 275 (290)
+|+||+|++++|.+ +|+|++ +++||+||+++++++||+|++++|+++.+..+
T Consensus 245 aqvaL~w~l~~~~v--~I~G~~--~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R 296 (324)
T 4gac_A 245 AQILLRWQVQRKVI--CIPKSI--NPSRILQNIQVFDFTFSPEEMKQLDALNKNWR 296 (324)
T ss_dssp HHHHHHHHHHTTCE--ECCBCC--CHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHCCCE--EEECCC--CHHHHHHHHhhCCCCCCHHHHHHHhccCcCCC
Confidence 99999999999865 699999 99999999999999999999999999865443
No 40
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=1.6e-46 Score=335.32 Aligned_cols=197 Identities=16% Similarity=0.193 Sum_probs=171.2
Q ss_pred cccccccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCC------CCCCCHHHHHHHHHHHHhhhCCCcccEEEEecC
Q 022904 3 CHLVFTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPP------PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 76 (290)
Q Consensus 3 ~~~a~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~------~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p 76 (290)
.|||+.|| .||+.+|++++. +|+++||+||++.. ..+++++.+++++++||++||+||||+|+||+|
T Consensus 87 ~DTA~~Yg--~sE~~lG~al~~-----~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p 159 (292)
T 4exb_A 87 IDTAPAYG--RSEERLGPLLRG-----QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSD 159 (292)
T ss_dssp EECCTTST--THHHHHHHHHTT-----TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECC
T ss_pred EEcCCccc--hHHHHHHHHhcc-----CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecC
Confidence 58999998 899999975532 79999999999842 235789999999999999999999999999999
Q ss_pred --CCCCccHH-HHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEe
Q 022904 77 --DYSNPGYL-DALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 77 --~~~~~~~~-~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
+...+ .. ++|++|++|+++||||+||||||++++++++++. |+++|++||++++.. .+++++|+++||++++
T Consensus 160 ~~d~~~~-~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a 234 (292)
T 4exb_A 160 GNDLDIL-ENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE---GDCAMVTYNLNERAE-RPVIEYAAAHAKGILV 234 (292)
T ss_dssp SCHHHHH-HHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH---SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEE
T ss_pred CCCcccc-chHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh---hcEEeeccccccCCH-HHHHHHHHHCCcEEEE
Confidence 44334 34 8999999999999999999999999999999984 999999999999887 6899999999999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHHHhCCCc
Q 022904 154 YGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAV 233 (290)
Q Consensus 154 ~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~l~~~~v 233 (290)
|+||++|+|++ ++|+|++|+||+|++++|.|
T Consensus 235 ~spL~~G~L~~-------------------------------------------------~~g~t~aqvaL~w~l~~~~v 265 (292)
T 4exb_A 235 KKALASGHACL-------------------------------------------------GAGQDPVRASFELVFDQPGV 265 (292)
T ss_dssp ECCSCC---------------------------------------------------------CCHHHHHHHHHHHSTTC
T ss_pred eccccCCccCC-------------------------------------------------CCCCCHHHHHHHHHHhCCCC
Confidence 99999997632 27899999999999999999
Q ss_pred ceeeecCCCCCHhHHHHhHhhhcCCCCHH
Q 022904 234 AGSMIGVRLGLAEHIQDTNAIFMLSLDED 262 (290)
Q Consensus 234 ~~~i~g~~~~~~~~l~enl~a~~~~Lt~e 262 (290)
.++|+|++ +++||+||++++++.||+|
T Consensus 266 ~~vI~g~~--~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 266 AAAIVGTI--NPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp CEEEECCC--CHHHHHHHHHHHHHHHC--
T ss_pred eEEEeCCC--CHHHHHHHHHHhhccCCCC
Confidence 99999999 9999999999999888865
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.24 E-value=7.6e-07 Score=88.67 Aligned_cols=99 Identities=11% Similarity=0.045 Sum_probs=74.4
Q ss_pred HHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEE--EccCCCH---H----------------HHHH
Q 022904 56 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV--ALTNFDT---E----------------RLRI 114 (290)
Q Consensus 56 ~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~i--Gvs~~~~---~----------------~l~~ 114 (290)
++.||..|++||+|| ++|..+... ..+++++++++..+|+|+++ |+|++.. + ....
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~~--~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~ 307 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVAG--VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELK 307 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCHH--HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHH
T ss_pred eeccccccCCCCceE-EEECCcCcc--HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHH
Confidence 567889999999999 587654432 36889999999999999999 5554433 1 2223
Q ss_pred HHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccccc-ccc
Q 022904 115 ILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG-GLL 162 (290)
Q Consensus 115 ~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~-G~L 162 (290)
.++ ...++++++.||..+. ++++.|.++|++|++++|.++ |++
T Consensus 308 ~i~-tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 308 VIR-SGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHH-HTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred Hhh-cCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 334 3469999999998542 678999999999999999876 543
No 42
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=81.48 E-value=32 Score=31.57 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=57.9
Q ss_pred hHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhC-CCcccEEEEecCCCCCccHHHHHHHHHHH
Q 022904 15 KISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMD-VPCLDMLQFHWWDYSNPGYLDALNHLTDL 93 (290)
Q Consensus 15 E~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg-~d~iDl~~lH~p~~~~~~~~~~~~~l~~L 93 (290)
|+-|-++|+++.++.+.+-++|.|-+-+.- -.+++..-+++.-++.. ..-+.++.+|.|..........-.+++.+
T Consensus 77 ~~~L~~~I~~~~~~~~P~~I~V~tTC~~e~---IGdDi~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs~~~G~~~a~~al 153 (458)
T 3pdi_B 77 DENVVEALKTICERQNPSVIGLLTTGLSET---QGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGCFESGFAAAVKAI 153 (458)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEECHHHHT---TCTTHHHHHHHTTTSCCSCSCSCEEEECCCTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCcHHHH---hcCCHHHHHHHHHHhccccCCCeEEEeeCCCcCCchhHHHHHHHHHH
Confidence 677778888887777777888888775321 12333333333333321 01478999999987654333333334433
Q ss_pred HH-------------cCCccEE-EccCCC--HHHHHHHHHc
Q 022904 94 KE-------------EGKIKTV-ALTNFD--TERLRIILEN 118 (290)
Q Consensus 94 ~~-------------~G~ir~i-Gvs~~~--~~~l~~~~~~ 118 (290)
.+ .++|--| |..++. .+.+..+++.
T Consensus 154 ~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~lL~~ 194 (458)
T 3pdi_B 154 VETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIES 194 (458)
T ss_dssp HHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHHHHH
Confidence 32 2456678 875442 3556666663
No 43
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.46 E-value=4.7 Score=34.77 Aligned_cols=104 Identities=8% Similarity=0.038 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q 126 (290)
++.+. +..+-+.|.++|+++|.+-....+... +.+.+.++.+..+.+...++...+. -+...++.+.+.+++ .+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~--~V~ 97 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWV-PQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHAD--EIA 97 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCS--EEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCcccc-ccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCC--EEE
Confidence 45555 455566678999998888765444321 2123556666777665566665655 567888888886544 333
Q ss_pred cccccc--------ccCh------hhhHHHHHHHhCCeEEecc
Q 022904 127 VQHSVV--------DMRP------QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 127 ~~~n~~--------~~~~------~~~~~~~~~~~gi~via~s 155 (290)
+....- .+.. -.+.+++|++.|+.|.++-
T Consensus 98 i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l 140 (295)
T 1ydn_A 98 VFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYV 140 (295)
T ss_dssp EEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 332111 1111 2456999999999997543
No 44
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.75 E-value=23 Score=30.51 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=61.9
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeee
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.++.+. +..+-+.|.++|+++|.+-...+|... +.+.+.++.+..+.+...++..+.. -+.+.++.+++.+++...+
T Consensus 26 ~~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWV-PQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTTCCEEEE
T ss_pred CCCHHH-HHHHHHHHHHcCcCEEEECCCcCcccc-ccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCCcCEEEE
Confidence 345555 555666778999999998876555321 1122333444455444556665655 4778888888865443222
Q ss_pred ecccccc------ccCh------hhhHHHHHHHhCCeEEec
Q 022904 126 QVQHSVV------DMRP------QQKMAELCQLTGVKLITY 154 (290)
Q Consensus 126 q~~~n~~------~~~~------~~~~~~~~~~~gi~via~ 154 (290)
-..-|-. +... -.+.+++|+++|+.|.++
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 2222111 0111 257899999999998753
No 45
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=74.90 E-value=34 Score=29.26 Aligned_cols=99 Identities=15% Similarity=0.053 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cC-----CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCC
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WW-----DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP 121 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p-----~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 121 (290)
+.+.+.+..++.+ .-|.|.||+=--- .| +...+ +..+...++.+++.+. -|.|.++.++.++++++.+.+
T Consensus 27 ~~~~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE-~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 27 DLDDAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVE-TSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQ 102 (280)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEECC---------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHH-HHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCC
Confidence 5677777665544 5699999998522 12 12233 6778888888887743 488899999999999997543
Q ss_pred eeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 122 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
+. +..|.... +.++++.++++|++++.+.
T Consensus 103 iI---Ndvsg~~~--d~~m~~~~a~~~~~vVlmh 131 (280)
T 1eye_A 103 MV---NDVSGGRA--DPAMGPLLAEADVPWVLMH 131 (280)
T ss_dssp EE---EETTTTSS--CTTHHHHHHHHTCCEEEEC
T ss_pred EE---EECCCCCC--CHHHHHHHHHhCCeEEEEc
Confidence 33 22232222 3479999999999999875
No 46
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=73.04 E-value=12 Score=32.83 Aligned_cols=100 Identities=7% Similarity=0.041 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhhhCCCcccEEEE-ecCCCCCccHHHHHHHHHHHHHcCCccEEEcc-----CCCHHHHHHHHHcC--CCe
Q 022904 51 IVRESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-----NFDTERLRIILENG--IPV 122 (290)
Q Consensus 51 ~i~~~~~~SL~~Lg~d~iDl~~l-H~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs-----~~~~~~l~~~~~~~--~~~ 122 (290)
.+.+-..+..+..|.|.||+=.- -+|+......++..+.++.+++.-.+ -|.|. ++.++.++++++.+ ...
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~ 159 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENL 159 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCC
Confidence 34444444446889999997433 34544333356777778888775222 36666 67889999999873 234
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.++-+... + ..++++.++++|.+|+.+.|
T Consensus 160 lINsv~~~----~-~~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 160 LLGNAEQE----N-YKSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp EEEEEBTT----B-CHHHHHHHHHHTCEEEEECS
T ss_pred eEEECCcc----c-HHHHHHHHHHhCCeEEEEcc
Confidence 44433221 1 24799999999999999875
No 47
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=68.06 E-value=37 Score=31.51 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=74.0
Q ss_pred ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCC----------------CCCHHHHHHHHHHHHhhhCCCcccEEEEec
Q 022904 12 GLLKISMASSSIEFVERGHQSSWISLTKWVPPPV----------------KMTSSIVRESIDVSRRRMDVPCLDMLQFHW 75 (290)
Q Consensus 12 G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~----------------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~ 75 (290)
|.-|.++-.+-+.+ ...-+..+||++=+|.... +.++..| -+|+.+.|+|.+
T Consensus 148 GTyeT~~~~~rk~~-gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri-------~~R~~~gyld~~---- 215 (557)
T 1uwk_A 148 GTYETFVEAGRQHY-GGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLNIESQQSRI-------DFRLETRYVDEQ---- 215 (557)
T ss_dssp HHHHHHHHHHHHHT-SSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEESCHHHH-------HHHHHTTSCCEE----
T ss_pred cHHHHHHHHHHHhc-CCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHH-------HHHHhCCCceeE----
Confidence 77787777544443 3346788999999884321 2234444 357778899874
Q ss_pred CCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCC--eeeeecccc
Q 022904 76 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQHS 130 (290)
Q Consensus 76 p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~--~~~~q~~~n 130 (290)
..++++++...++.+++|+..+||+-.--.+.+.++++.++. +..-|+..|
T Consensus 216 ----~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 268 (557)
T 1uwk_A 216 ----ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTSAH 268 (557)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCCSCTT
T ss_pred ----cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 223799999999999999999999998888999999987554 555677653
No 48
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=67.26 E-value=38 Score=31.42 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=74.0
Q ss_pred ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCC----------------CCCHHHHHHHHHHHHhhhCCCcccEEEEec
Q 022904 12 GLLKISMASSSIEFVERGHQSSWISLTKWVPPPV----------------KMTSSIVRESIDVSRRRMDVPCLDMLQFHW 75 (290)
Q Consensus 12 G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~----------------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~ 75 (290)
|.-|.++-.+-+.+ ...-+..+||++=+|.... +.++..| -+|+.+.|+|.+.
T Consensus 144 GTyeT~~~~~rk~~-gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri-------~~R~~~gyld~~~--- 212 (552)
T 2fkn_A 144 GTYETFAELARQHF-GGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAVEVDEKRI-------DKRIETKYCDRKT--- 212 (552)
T ss_dssp HHHHHHHHHHHHHS-SSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEESCHHHH-------HHHHHTTSCSEEE---
T ss_pred cHHHHHHHHHHHhc-CCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHH-------HHHHhCCcceeEc---
Confidence 77787777444433 3346788999999884321 2234444 4577788999752
Q ss_pred CCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCC--eeeeecccc
Q 022904 76 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQHS 130 (290)
Q Consensus 76 p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~--~~~~q~~~n 130 (290)
.++++++...++.+++|+..+||+-.--.+.+.++++.++. +..-|+..|
T Consensus 213 -----~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 264 (552)
T 2fkn_A 213 -----ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQTSAH 264 (552)
T ss_dssp -----SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECCCSCTT
T ss_pred -----CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 22789999999999999999999998888999999987544 555677653
No 49
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=66.44 E-value=37 Score=31.50 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=74.2
Q ss_pred ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCC----------------CCCHHHHHHHHHHHHhhhCCCcccEEEEec
Q 022904 12 GLLKISMASSSIEFVERGHQSSWISLTKWVPPPV----------------KMTSSIVRESIDVSRRRMDVPCLDMLQFHW 75 (290)
Q Consensus 12 G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~----------------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~ 75 (290)
|.-|.++-.+-+.+ ...-+..+||++=++.... +.++..|+ +|+.+.|+|.+-
T Consensus 143 GTyeT~~~~~rk~~-gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~--- 211 (551)
T 1x87_A 143 GTYETFAEVARQHF-GGTLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMT--- 211 (551)
T ss_dssp HHHHHHHHHHHHHS-TTCCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE---
T ss_pred cHHHHHHHHHHHhc-CCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEc---
Confidence 77787777544443 3346788999999874211 22344443 577788999742
Q ss_pred CCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCC--eeeeecccc
Q 022904 76 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQHS 130 (290)
Q Consensus 76 p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~--~~~~q~~~n 130 (290)
.++++++...++.+++|+..+||+-.--.+.+.++++.++. +..-|+..|
T Consensus 212 -----~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 263 (551)
T 1x87_A 212 -----DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSAH 263 (551)
T ss_dssp -----SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCTT
T ss_pred -----CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 22789999999999999999999998888999999987544 555677653
No 50
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=65.97 E-value=61 Score=27.45 Aligned_cols=106 Identities=10% Similarity=0.008 Sum_probs=75.3
Q ss_pred CCCCHHHHHHHHHHHHh-hhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCee
Q 022904 45 VKMTSSIVRESIDVSRR-RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 45 ~~~~~~~i~~~~~~SL~-~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
..++.+...+-.+-.++ -+++++|-|..+..+....++..+++++.+.|+++|..- +=+++-++....++.+.+ ++
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~V-lpy~~dd~~~akrl~~~G--~~ 158 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDV-MVYTSDDPIIARQLAEIG--CI 158 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEE-EEEECSCHHHHHHHHHSC--CS
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhC--CC
Confidence 36688888888888888 889999999999888777777899999999999999753 444566788888887754 33
Q ss_pred eeeccccccccC---hhhhHHHHHHHh-CCeEEe
Q 022904 124 SNQVQHSVVDMR---PQQKMAELCQLT-GVKLIT 153 (290)
Q Consensus 124 ~~q~~~n~~~~~---~~~~~~~~~~~~-gi~via 153 (290)
++.-.=.+.-.. .+.++++..++. ++.||+
T Consensus 159 aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 159 AVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp EEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred EEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE
Confidence 332211111111 124566777765 788887
No 51
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=64.18 E-value=83 Score=29.17 Aligned_cols=139 Identities=12% Similarity=0.066 Sum_probs=77.2
Q ss_pred hhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHH
Q 022904 14 LKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDL 93 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L 93 (290)
.|+.|-++|+++.+..+.+-|+|.|=+-+.--+.+.+.+-+.+++ ..| ++++.+|.|..........-.++..+
T Consensus 72 ~~~kL~~~I~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~---~~g---~pVi~v~tpgf~g~~~~G~d~a~~~l 145 (511)
T 2xdq_B 72 SQEKVVDNIIRKDTEEHPDLIVLTPTCTSSILQEDLQNFVRRASL---STT---ADVLLADVNHYRVNELQAADRTLEQI 145 (511)
T ss_dssp SSSHHHHHHHHHHHHHCCSEEEEECCHHHHTTCCCHHHHHHHHHH---HCS---SEEEECCCCTTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCEEEEeCCcHHHHhccCHHHHHHHhhh---ccC---CCEEEeeCCCcccchhHHHHHHHHHH
Confidence 455555667777655566677888777543223344555555443 444 68999999876655323332333333
Q ss_pred H------------------HcCCccEEEccCCC------HHHHHHHHHc-CCCeeeeec--------------ccccccc
Q 022904 94 K------------------EEGKIKTVALTNFD------TERLRIILEN-GIPVVSNQV--------------QHSVVDM 134 (290)
Q Consensus 94 ~------------------~~G~ir~iGvs~~~------~~~l~~~~~~-~~~~~~~q~--------------~~n~~~~ 134 (290)
. ..++|--||..+.. .+.+..+++. |+.+..+-. .+|+...
T Consensus 146 v~~~~~~~~~~~~~~~~~~~~~~VNiiG~~~~~~~~~gD~~eik~lL~~~Gi~v~~~~~gg~~~~ei~~~~~A~~niv~~ 225 (511)
T 2xdq_B 146 VQFYIDKARRQGTLGTSKTPTPSVNIIGITTLGFHNQHDCRELKQLMADLGIQVNLVIPAAATVHDLQRLPQAWFNLVPY 225 (511)
T ss_dssp HHHHHHHHHHHTCCCCSCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHHHTCEEEEEEETTCCTTTGGGGGGSSEEECCC
T ss_pred HHHHhhccccccccccccCCCCceEEEeccCCCCCCccHHHHHHHHHHHCCCeEEEEECCcCcHHHHHhhccCCEEEEEc
Confidence 2 13468888977643 3566666664 554332111 1222211
Q ss_pred C-hhhhHHHHH-HHhCCeEEeccccc
Q 022904 135 R-PQQKMAELC-QLTGVKLITYGTVM 158 (290)
Q Consensus 135 ~-~~~~~~~~~-~~~gi~via~spl~ 158 (290)
. ......++. ++.||+++...|++
T Consensus 226 ~~~~~~~A~~Le~~~GiP~i~~~PiG 251 (511)
T 2xdq_B 226 REIGGLTAQYLEREFGQPSVRITPMG 251 (511)
T ss_dssp TTSSHHHHHHHHHHHCCCEECCCCCS
T ss_pred hhhhHHHHHHHHHHhCCCeEeecccC
Confidence 1 123455666 67799999877774
No 52
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=61.78 E-value=48 Score=28.32 Aligned_cols=99 Identities=7% Similarity=0.010 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCC----ccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCC
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSN----PGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIP 121 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~----~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~ 121 (290)
+.+.+.+..++.+ .-|.|.||+=--- +|.... +....+...++.++++ +. -|.|.++.++.++++++.|.+
T Consensus 36 ~~~~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 36 SLIDAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCC
Confidence 4566666654444 5699999987633 343221 1134566677777665 43 488899999999999997544
Q ss_pred eeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 122 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
+. +..|.. .+.++++.+++.|++++.+.
T Consensus 113 iI---Ndvsg~---~d~~~~~~~a~~~~~vVlmh 140 (282)
T 1aj0_A 113 II---NDIRSL---SEPGALEAAAETGLPVCLMH 140 (282)
T ss_dssp EE---EETTTT---CSTTHHHHHHHHTCCEEEEC
T ss_pred EE---EECCCC---CCHHHHHHHHHhCCeEEEEc
Confidence 33 222222 23478999999999999874
No 53
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=61.18 E-value=17 Score=34.17 Aligned_cols=143 Identities=10% Similarity=0.062 Sum_probs=80.3
Q ss_pred cccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHH
Q 022904 7 FTYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDA 86 (290)
Q Consensus 7 ~~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~ 86 (290)
..++.| .|+.|-++|+++.+..+.+-|+|.|=+-+.--+.+.+.+-+.++ . -+.++.+|.|..........
T Consensus 63 ~di~~G-~e~kL~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~~v~~~~~-------~-~~pVi~v~tpgf~g~~~~G~ 133 (525)
T 3aek_B 63 SHMGTD-TAILLKDALAAAHARYKPQAMAVALTCTAELLQDDPNGISRALN-------L-PVPVVPLELPSYSRKENYGA 133 (525)
T ss_dssp GGCTTH-HHHHHHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHHHHHHHHT-------C-SSCEEECCCCTTTCCHHHHH
T ss_pred ceeeCC-cHHHHHHHHHHHHHhcCCCEEEEECCcHHHHhcccHHHHHHHhc-------C-CCCEEEEECCCcCCchhHHH
Confidence 344545 67777888888876666566888888754322223343333332 2 46899999997766534444
Q ss_pred HHHHHHHHH----------cCCccEEEccCCC------HHHHHHHHHc-CCCeeeeec--------------cccccccC
Q 022904 87 LNHLTDLKE----------EGKIKTVALTNFD------TERLRIILEN-GIPVVSNQV--------------QHSVVDMR 135 (290)
Q Consensus 87 ~~~l~~L~~----------~G~ir~iGvs~~~------~~~l~~~~~~-~~~~~~~q~--------------~~n~~~~~ 135 (290)
-.++..+.+ .++|--||..+.. .+.+..+++. |+.+..+-. .+|+....
T Consensus 134 ~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~~~A~~niv~~~ 213 (525)
T 3aek_B 134 DETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKLGQAHFNVLMYP 213 (525)
T ss_dssp HHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTGGGSSEEEECCH
T ss_pred HHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhccCCEEEEECh
Confidence 445555543 2457788987732 3556666664 444332111 12221111
Q ss_pred -hhhhHHHHHH-HhCCeEEeccccc
Q 022904 136 -PQQKMAELCQ-LTGVKLITYGTVM 158 (290)
Q Consensus 136 -~~~~~~~~~~-~~gi~via~spl~ 158 (290)
......++++ +.||+++...|++
T Consensus 214 ~~g~~~A~~Le~r~GiP~i~~~PiG 238 (525)
T 3aek_B 214 ETGESAARHLERACKQPFTKIVPIG 238 (525)
T ss_dssp HHHHHHHHHHHHHSCCCBCCCCCCS
T ss_pred hhHHHHHHHHHHHcCCCceecCCcC
Confidence 1233455554 5589888877775
No 54
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=59.89 E-value=20 Score=31.51 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=60.5
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccE-----EEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEcc--C-CCHHHHHHHH
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDM-----LQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALT--N-FDTERLRIIL 116 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl-----~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs--~-~~~~~l~~~~ 116 (290)
.++.+...+ +-+.|.++|+|+|.+ +..-.|+.... ....++.++.+++. ..++...+. + -....++.+.
T Consensus 26 ~~~~e~k~~-i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~-~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRA-IARALDKAKVDSIEVAHGDGLQGSSFNYGFG-RHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHH-HHHHHHHHTCSEEECSCTTSTTCCBTTTBCC-SSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEEecCCCCCCCCCcccCC-CCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 456665554 445667799887777 33223332111 23456667677654 245555442 2 2467788888
Q ss_pred HcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEec
Q 022904 117 ENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 117 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
+.+++...+-...|-. ....+.+++|+++|+.++..
T Consensus 104 ~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 104 QAGARVVRVATHCTEA--DVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEEEEE
T ss_pred hCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEEEEE
Confidence 7665543333333332 23457899999999988765
No 55
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=59.79 E-value=80 Score=26.72 Aligned_cols=97 Identities=10% Similarity=0.021 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHc--CCCeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN--GIPVVS 124 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~--~~~~~~ 124 (290)
+.+.+.+..++.. .-|.|.||+=.--. ..+..+.+...++.+++. +. -|.|.++.++.++++++. +.++.
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iI- 104 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMI- 104 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEE-
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEE-
Confidence 4566766666655 68998888866442 222267788888888876 33 478889999999999987 43332
Q ss_pred eeccccccccChh--hhHHHHHHHhCCeEEeccc
Q 022904 125 NQVQHSVVDMRPQ--QKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 125 ~q~~~n~~~~~~~--~~~~~~~~~~gi~via~sp 156 (290)
| ..|.. .+ .++++.+++.|++++.+..
T Consensus 105 N--dvs~~---~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 105 N--STSAD---QWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp E--EECSC---HHHHHHHHHHHHHHTCEEEEESC
T ss_pred E--ECCCC---ccccHHHHHHHHHcCCCEEEEec
Confidence 2 22221 13 4799999999999999764
No 56
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=58.70 E-value=51 Score=29.27 Aligned_cols=111 Identities=12% Similarity=-0.004 Sum_probs=65.8
Q ss_pred cEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEc-cCCCHHH
Q 022904 33 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTER 111 (290)
Q Consensus 33 ~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGv-s~~~~~~ 111 (290)
++-|.-+... ..+.+...+-++. |+.+++++| ..|-.. +.++.+.++++.-.|--++- +-++++.
T Consensus 208 d~~l~vDan~---~~~~~~a~~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~ 273 (388)
T 2nql_A 208 QAKIAADMHW---NQTPERALELIAE-MQPFDPWFA-----EAPVWT-----EDIAGLEKVSKNTDVPIAVGEEWRTHWD 273 (388)
T ss_dssp TSEEEEECCS---CSCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHTSCCSCEEECTTCCSHHH
T ss_pred CCEEEEECCC---CCCHHHHHHHHHH-HhhcCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHH
Confidence 3444444422 3456665555544 677766654 344221 33566777777655544443 3457888
Q ss_pred HHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 112 LRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 112 l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
+..+++. ...+++|+..+- -. ..-..+..+|+++|+.++.++.+..
T Consensus 274 ~~~~i~~-~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~h~~~es 320 (388)
T 2nql_A 274 MRARIER-CRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVIPHATVGA 320 (388)
T ss_dssp HHHHHTT-SCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEECCCCCSSC
T ss_pred HHHHHHc-CCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEeecCCCc
Confidence 8888873 347777776553 11 1134688999999999998754433
No 57
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=58.08 E-value=23 Score=30.65 Aligned_cols=105 Identities=15% Similarity=0.172 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q 126 (290)
++.+. +..+-+.|.++|+++|.+-..-+|... +.+.+..+.+..+.+...++..++. -+...++.+.+.+.+..-+-
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWI-PALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGGINEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHTCSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccc-cccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCCcCEEEEE
Confidence 45554 555666788999999999876665321 1112223344444444556666666 36778888888765533333
Q ss_pred ccccccc------cCh------hhhHHHHHHHhCCeEEec
Q 022904 127 VQHSVVD------MRP------QQKMAELCQLTGVKLITY 154 (290)
Q Consensus 127 ~~~n~~~------~~~------~~~~~~~~~~~gi~via~ 154 (290)
..-|..+ ... -.+.+++++++|+.+.++
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3222211 111 246799999999998753
No 58
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=57.83 E-value=48 Score=28.62 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCCcc----HHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCe
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG----YLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~~----~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
.+.+.+..++.+ .-|.|.||+-.-- .|...... +..+...++.++++ +. -|.|.++.++.++++++.+.++
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 455555555554 5789899987533 23222111 23345555666665 43 4788999999999999975433
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
. +..|..+. +.++++.+++.|++++.+..
T Consensus 139 I---Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I---NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E---EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred E---EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 3 33333322 34789999999999998753
No 59
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=55.65 E-value=68 Score=26.14 Aligned_cols=41 Identities=17% Similarity=0.098 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHhC-CCcceeeecCCCCCHhHHHHhHhhhc
Q 022904 216 GVSIPVVAVRYILDQ-PAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 g~s~~~~al~~~l~~-~~v~~~i~g~~~~~~~~l~enl~a~~ 256 (290)
..|-.+.|+++++.+ +.-..++.|+..+..+|.-.|+..+-
T Consensus 72 D~TD~e~Al~~a~~~~~~~~I~i~Ga~GGR~DH~lani~lL~ 113 (218)
T 3ihk_A 72 NDTDTELALKTIFDCFGRVEIIVFGAFGGRIDHMLSNIFLPS 113 (218)
T ss_dssp SSCHHHHHHHHHHHHTSSCEEEEESCSSSCHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEECCCCCchhhHHHHHHHHH
Confidence 346778899999987 56677789999999999999997664
No 60
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=55.23 E-value=1.2e+02 Score=27.25 Aligned_cols=106 Identities=13% Similarity=0.019 Sum_probs=68.7
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-----CCc-cEEEccCCCHHHHHHHHHcCC
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~ 120 (290)
.+.+...+-+ +.|+.++.. +++ ++-.|-.... ..+-++.+.+|.++ ..| -..|=+.++.+.+..+++. .
T Consensus 249 ~~~~~A~~~~-~~L~~~~~~-~~l-~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~-~ 323 (413)
T 1kko_A 249 MDPVRCAEYI-ASLEKEAQG-LPL-YIEGPVDAGN-KPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDA-G 323 (413)
T ss_dssp TCHHHHHHHH-HHTGGGGTT-SCE-EEECCCCCSS-HHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHT-T
T ss_pred CCHHHHHHHH-HHHHhccCC-cce-EEECCcCCCC-CcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHh-C
Confidence 3555554333 335555442 665 8888855321 13567777777775 333 3456667789999999874 4
Q ss_pred CeeeeeccccccccC-hhhhHHHHHHHhCCeEEecccc
Q 022904 121 PVVSNQVQHSVVDMR-PQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~via~spl 157 (290)
.++++|+..+-+-.- .-.++..+|+++|+.++..+..
T Consensus 324 a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 324 SCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp CCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 578888877653222 2357899999999999998764
No 61
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=54.51 E-value=53 Score=29.32 Aligned_cols=72 Identities=7% Similarity=0.033 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEeccccccc
Q 022904 87 LNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.|-- |=+-++.+.+..+++. ..++++|+..+-+-. ..-..+...|+.+|+.++..+.+..+
T Consensus 229 ~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 229 FDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKK-DAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHHHHHCSSCE-EEECCCHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHc-CCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 456667777655554 7778888888888874 346777776654321 12357899999999999987655443
No 62
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=54.16 E-value=54 Score=28.71 Aligned_cols=97 Identities=6% Similarity=-0.066 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~ 125 (290)
.+.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|--++- +-++++.+..+++ ....+++
T Consensus 200 ~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~-~~~~d~v 267 (359)
T 1mdl_A 200 LDVPAAIKRSQA-LQQEGVTWI-----EEPTLQ-----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALS-IGACRLA 267 (359)
T ss_dssp SCHHHHHHHHHH-HHHHTCSCE-----ECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHH-TTCCSEE
T ss_pred CCHHHHHHHHHH-HHHhCCCeE-----ECCCCh-----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHH-cCCCCEE
Confidence 345555444433 566665543 333221 23556667776655544433 3457788888877 3457777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEecc
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~s 155 (290)
|+..+-+-. ..-..+...|+.+|+.++..+
T Consensus 268 ~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 268 MPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp CCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred eecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 776654211 113578899999999988874
No 63
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=54.01 E-value=68 Score=28.36 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCCccEEEcc-CCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 87 LNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.++++.-.|--++.- -++++.+..+++. ...+++|+..+-+-. ..-..+...|+++|+.++..+.+
T Consensus 230 ~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 301 (384)
T 2pgw_A 230 IPAMAHVREKVGIPIVADQAAFTLYDVYEICRQ-RAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHSSF 301 (384)
T ss_dssp HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeeccCc
Confidence 4455566655444433332 3467777777763 346666665553211 12357899999999999987644
No 64
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=53.45 E-value=73 Score=28.09 Aligned_cols=85 Identities=9% Similarity=0.029 Sum_probs=60.3
Q ss_pred CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCH
Q 022904 30 HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT 109 (290)
Q Consensus 30 ~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~ 109 (290)
.+.-++|.+|..-.+.....+.+.+.+.+.++.+|....+++.+-. ..... ++++.+.+.++.+...|-.+|.+|.+.
T Consensus 98 ~~piilV~NK~DLl~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA-~~g~g-i~~L~~~I~~~~~~~~i~~vG~~nvGK 175 (369)
T 3ec1_A 98 DNPILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSA-AKGIG-MAKVMEAINRYREGGDVYVVGCTNVGK 175 (369)
T ss_dssp TSCEEEEEECGGGSCTTCCHHHHHHHHHHHHHTTTCCCSEEEECBT-TTTBT-HHHHHHHHHHHHTTSCEEEECCTTSSH
T ss_pred CCCEEEEEEChhcCCCccCHHHHHHHHHHHHHHcCCCcccEEEEEC-CCCCC-HHHHHHHHHhhcccCcEEEEcCCCCch
Confidence 4567888999975433345677777777778888865456665543 22233 688899998888888899999999987
Q ss_pred HHHHHHH
Q 022904 110 ERLRIIL 116 (290)
Q Consensus 110 ~~l~~~~ 116 (290)
+.+...+
T Consensus 176 StliN~L 182 (369)
T 3ec1_A 176 STFINRI 182 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655444
No 65
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.41 E-value=90 Score=26.90 Aligned_cols=104 Identities=11% Similarity=-0.010 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc----CCccEEEccCCCHHHHHHHHHc--CCC
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE----GKIKTVALTNFDTERLRIILEN--GIP 121 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~----G~ir~iGvs~~~~~~l~~~~~~--~~~ 121 (290)
+.+.+.+..++.. .-|.|.||+=. .... .+ -.+.+..+..+.+. -. --|.|.++.++.++++++. +.+
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g~~~-v~-~~eem~rvv~~i~~~~~~~~-vpisIDT~~~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--DDGL-LD-ARTEMTTFLNLIMSEPEIAR-VPVMIDSSKWEVIEAGLKCLQGKS 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--CCTT-SC-HHHHHHHHHHHHHTCHHHHT-SCEEEECSCHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--CCCC-CC-HHHHHHHHHHHHHHhhhcCC-CeEEEeCCCHHHHHHHHHhcCCCC
Confidence 5566766666655 57999999976 2111 12 23444444443331 11 2488889999999999984 432
Q ss_pred eeeeeccccccccCh-hhhHHHHHHHhCCeEEeccccccc
Q 022904 122 VVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~via~spl~~G 160 (290)
.+| ..|.....+ -.++++.++++|.+++.+.--..|
T Consensus 109 -iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 109 -IVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp -EEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred -EEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 222 233322111 127899999999999997533334
No 66
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=52.83 E-value=24 Score=30.26 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeee
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.++.+... .+-+.|.++|+++|.+-..-.|....- +.+....+..+++...++..++. .+...++.+.+.+.+...+
T Consensus 23 ~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~-~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 23 IVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQ-MGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGG-GTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccc-cCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCCCCEEEE
Confidence 35666655 666678899999999987665532111 12223333344333234433433 4678888888876553333
Q ss_pred eccccccc------cC------hhhhHHHHHHHhCCeEEec
Q 022904 126 QVQHSVVD------MR------PQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 126 q~~~n~~~------~~------~~~~~~~~~~~~gi~via~ 154 (290)
-..-|-.+ .. .-.+.+++++++|+.+.++
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 22222211 11 1245789999999998754
No 67
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=51.51 E-value=73 Score=27.93 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 87 LNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.++++.-.|--. |=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+.+..
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1nu5_A 228 FGALRRLTEQNGVAILADESLSSLSSAFELARD-HAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDS 301 (370)
T ss_dssp HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHT-TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcch
Confidence 4455556555444322 3334567777777763 346666665543211 1135788999999999998876544
No 68
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=51.11 E-value=71 Score=25.18 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEcc-CCCHHHHHHHHHcCCCeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALT-NFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~ 125 (290)
+.+...+-++ .+..-|. |++-+|... +...+ .++.+++. ++-..||++ ..++++...+.+.+.++.
T Consensus 20 ~~~~~~~~~~-~~~~~G~---~~iev~~~~---~~~~~---~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-- 87 (205)
T 1wa3_A 20 SVEEAKEKAL-AVFEGGV---HLIEITFTV---PDADT---VIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-- 87 (205)
T ss_dssp SHHHHHHHHH-HHHHTTC---CEEEEETTS---TTHHH---HHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE--
T ss_pred CHHHHHHHHH-HHHHCCC---CEEEEeCCC---hhHHH---HHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE--
Confidence 4566555544 3445565 566677642 21233 34444443 322358884 478898888887665444
Q ss_pred eccccccccChhhhHHHHHHHhCCeEEe
Q 022904 126 QVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
+.-+ ...++++.|++.|+.+++
T Consensus 88 -v~~~-----~~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 88 -VSPH-----LDEEISQFCKEKGVFYMP 109 (205)
T ss_dssp -ECSS-----CCHHHHHHHHHHTCEEEC
T ss_pred -EcCC-----CCHHHHHHHHHcCCcEEC
Confidence 2111 124799999999999986
No 69
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=51.02 E-value=76 Score=28.29 Aligned_cols=110 Identities=6% Similarity=-0.076 Sum_probs=69.6
Q ss_pred cEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEE-ccCCCHHH
Q 022904 33 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTER 111 (290)
Q Consensus 33 ~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iG-vs~~~~~~ 111 (290)
++-|.-.... ..+.+...+-++. |+.+++++ +..|-.. +-++.+.++++.-.|--.+ =+-++++.
T Consensus 215 d~~l~vDan~---~~~~~~a~~~~~~-l~~~~i~~-----iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~ 280 (407)
T 2o56_A 215 DVDIIAEMHA---FTDTTSAIQFGRM-IEELGIFY-----YEEPVMP-----LNPAQMKQVADKVNIPLAAGERIYWRWG 280 (407)
T ss_dssp TSEEEEECTT---CSCHHHHHHHHHH-HGGGCCSC-----EECSSCS-----SSHHHHHHHHHHCCSCEEECTTCCHHHH
T ss_pred CCEEEEECCC---CCCHHHHHHHHHH-HHhcCCCE-----EeCCCCh-----hhHHHHHHHHHhCCCCEEeCCCcCCHHH
Confidence 4556656532 4567776666554 77777654 4455332 2355677777765554443 33456788
Q ss_pred HHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 112 LRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 112 l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
+..+++ ....+++|+..+-+-. ..-..+..+|+.+|+.++..+..
T Consensus 281 ~~~~i~-~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 281 YRPFLE-NGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHH-TTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHH-cCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 888887 3457888887664211 12357899999999999987664
No 70
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=50.21 E-value=1.2e+02 Score=26.02 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC--ccHHHHHHHHHHHHHcCCccEEEccCCC--------H-HHHHH
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN--PGYLDALNHLTDLKEEGKIKTVALTNFD--------T-ERLRI 114 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~--~~~~~~~~~l~~L~~~G~ir~iGvs~~~--------~-~~l~~ 114 (290)
+.+++.++..+... ..+|++ .++.|-.-.+.. ..+....+-++.+++.+.. .||+..+. . ..+..
T Consensus 93 ~~~~~~l~~~L~~~-~~~GI~--nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f-~IgvA~yPE~Hp~a~~~~~d~~~ 168 (304)
T 3fst_A 93 DATPDELRTIARDY-WNNGIR--HIVALRGDLPPGSGKPEMYASDLVTLLKEVADF-DISVAAYPEVHPEAKSAQADLLN 168 (304)
T ss_dssp TSCHHHHHHHHHHH-HHTTCC--EEEEECCCCC------CCCHHHHHHHHHHHCCC-EEEEEECTTCCTTCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHH-HHCCCC--EEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCC-eEEEEeCCCcCCCCCCHHHHHHH
Confidence 34677777777665 578876 566665421110 1112334444444554543 68887542 1 24555
Q ss_pred HHHc---CCCeeeeeccccccccChhhhHHHHHHHhCCe
Q 022904 115 ILEN---GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 150 (290)
Q Consensus 115 ~~~~---~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 150 (290)
+.+. |-.+.+.|.-|+. ... ..+++.|++.||.
T Consensus 169 Lk~KvdAGAdf~iTQ~ffD~--~~~-~~f~~~~r~~Gi~ 204 (304)
T 3fst_A 169 LKRKVDAGANRAITQFFFDV--ESY-LRFRDRCVSAGID 204 (304)
T ss_dssp HHHHHHHTCCEEEECCCSCH--HHH-HHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCccCCH--HHH-HHHHHHHHhcCCC
Confidence 5554 7889999999987 332 4688999999865
No 71
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=50.16 E-value=68 Score=28.52 Aligned_cols=99 Identities=8% Similarity=-0.070 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.+.+...+-++. |+.+++++| ..|-.. +.++.+.++++.-.|--. +=+-++++.+..+++. ...+++
T Consensus 218 ~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v 285 (393)
T 2og9_A 218 WDRPTAQRMCRI-FEPFNLVWI-----EEPLDA-----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRH-RAADYL 285 (393)
T ss_dssp CCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSEE
T ss_pred CCHHHHHHHHHH-HHhhCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHC-CCCCEE
Confidence 345555444433 555555443 333221 224455566655444333 3334567777777763 346666
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
|+..+-+-. ..-..+...|+.+|+.++.++..
T Consensus 286 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 318 (393)
T 2og9_A 286 MPDAPRVGGITPFLKIASLAEHAGLMLAPHFAM 318 (393)
T ss_dssp CCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred eeCccccCCHHHHHHHHHHHHHcCCEEeccCcc
Confidence 666543211 11357899999999999876543
No 72
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=49.91 E-value=87 Score=25.58 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHhCCCc-ceeeecCCCCCHhHHHHhHhhhc
Q 022904 216 GVSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v-~~~i~g~~~~~~~~l~enl~a~~ 256 (290)
..|-.++||.++..++.- ..++.|+..+..+|.-.|+..+-
T Consensus 76 D~TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~lL~ 117 (222)
T 3mel_A 76 DDTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPF 117 (222)
T ss_dssp SSCHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHHHHH
Confidence 346678889998887664 67789999899999999997654
No 73
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=49.50 E-value=53 Score=28.63 Aligned_cols=99 Identities=8% Similarity=0.054 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCCc---cHHHHHHHHHHHHHc--CCccEEEccCCCHHHHHHHHHcCCC
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNP---GYLDALNHLTDLKEE--GKIKTVALTNFDTERLRIILENGIP 121 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~---~~~~~~~~l~~L~~~--G~ir~iGvs~~~~~~l~~~~~~~~~ 121 (290)
+.+.+.+..++.+ .-|.|.||+=--- +|....+ .+..+...++.++++ +. -|.|.++.++.++++++.+..
T Consensus 63 ~~~~a~~~A~~~v-~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 63 SDAAARDAVHRAV-ADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGAD 139 (318)
T ss_dssp -CHHHHHHHHHHH-HTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCC
Confidence 3455555554443 5689999986532 1321111 123455556777765 33 588999999999999997544
Q ss_pred eeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 122 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
+. +..|... +.++++.+++.|++++.+.
T Consensus 140 iI---NDVsg~~---d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 140 LI---NDTWGGV---DPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp EE---EETTSSS---STTHHHHHHHHTCEEEEEC
T ss_pred EE---EECCCCC---chHHHHHHHHhCCCEEEEC
Confidence 32 2233322 4579999999999999875
No 74
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=49.41 E-value=1.2e+02 Score=26.21 Aligned_cols=100 Identities=7% Similarity=-0.003 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEE-ecCCCC----Ccc----HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQF-HWWDYS----NPG----YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN 118 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~l-H~p~~~----~~~----~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~ 118 (290)
+.+.+.+..++.+ .=|.|.||+=-- -.|... ... +..+...++.+++.-. --|.|.++.++.++++++.
T Consensus 47 ~~~~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~-vpISIDT~~~~Va~aAl~a 124 (314)
T 3tr9_A 47 DLNSALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP-QLISVDTSRPRVMREAVNT 124 (314)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC-SEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC-CeEEEeCCCHHHHHHHHHc
Confidence 5666666666544 458999998643 233322 111 2236667777777522 2589999999999999997
Q ss_pred CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 119 GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 119 ~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
|.++. +..|... ..++++.+++.|++++.+.
T Consensus 125 Ga~iI---NDVsg~~---~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 125 GADMI---NDQRALQ---LDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp TCCEE---EETTTTC---STTHHHHHHHHTCCEEEEC
T ss_pred CCCEE---EECCCCC---chHHHHHHHHhCCeEEEEC
Confidence 64433 2333322 2379999999999999864
No 75
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=49.27 E-value=60 Score=28.97 Aligned_cols=87 Identities=8% Similarity=0.046 Sum_probs=55.0
Q ss_pred cccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHH
Q 022904 67 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 144 (290)
Q Consensus 67 ~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 144 (290)
-+++.++-.|-...+ ++.+.+|++.-.| -..|=|-++...+..+++. ..++++|+..+- -. ..-..+...|
T Consensus 215 ~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~-~a~d~v~~k~~~-GGit~~~~i~~~A 287 (389)
T 3s5s_A 215 GADVALLEQPVPRDD-----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAE-RAATVVNIKLMK-GGIAEALDIAAVA 287 (389)
T ss_dssp TCEEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHT-TCCSEEEECHHH-HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc-CCCCEEEecCCC-CCHHHHHHHHHHH
Confidence 346777777654333 3345555554333 3556667788888888773 346777776553 11 1134678999
Q ss_pred HHhCCeEEeccccccc
Q 022904 145 QLTGVKLITYGTVMGG 160 (290)
Q Consensus 145 ~~~gi~via~spl~~G 160 (290)
+.+|+.++..+.+..+
T Consensus 288 ~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 288 RAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHTTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999988766443
No 76
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=48.67 E-value=1e+02 Score=27.34 Aligned_cols=98 Identities=8% Similarity=-0.048 Sum_probs=57.5
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEE-ccCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~ 125 (290)
++.+...+-++. |+.+++++ +..|-.. +-++.+.++++.-.|--.+ =+-++++.+..+++. ...+++
T Consensus 205 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v 272 (391)
T 2qgy_A 205 EDLDQTKSFLKE-VSSFNPYW-----IEEPVDG-----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISR-NAADIF 272 (391)
T ss_dssp SCHHHHHHHHHH-HGGGCCSE-----EECSSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCCe-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCEE
Confidence 355555444443 56655543 3444321 2355666666654444333 334577888888873 347777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEeccc
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
|+..+-+-. ..-..+...|+.+|+.++..+.
T Consensus 273 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 273 NPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 776654211 1135789999999999998764
No 77
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=48.46 E-value=78 Score=29.56 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=58.8
Q ss_pred hHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCC-cccEEEEecCCCCCccH---HHHHHHH
Q 022904 15 KISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVP-CLDMLQFHWWDYSNPGY---LDALNHL 90 (290)
Q Consensus 15 E~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d-~iDl~~lH~p~~~~~~~---~~~~~~l 90 (290)
|+-|-++|+++.++.+.+-|+|.|=+-+.- -.+++..-+++.-++.+.. .+.++.+|.|....... +.++.+|
T Consensus 128 ~~kL~~aI~~~~~~~~P~~I~V~tTC~~e~---IGdDi~~v~~~~~~~~~ip~~~~Vv~v~tpgf~Gs~~~G~~~a~~al 204 (523)
T 3u7q_B 128 QQNMKDGLQNCKATYKPDMIAVSTTCMAEV---IGDDLNAFINNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGI 204 (523)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEECHHHHH---HTCCHHHHHHHHHHTTSSCTTSCCCBCCCCTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCcHHHH---hcCCHHHHHHHHHHhcCCCCCceEEEeeCCCCCCChhHHHHHHHHHH
Confidence 667777888887766667788888774311 1134444444444555532 35788899887664422 3334443
Q ss_pred HH-HHH----------cCCccEEEccCCCH---HHHHHHHHc-CCCe
Q 022904 91 TD-LKE----------EGKIKTVALTNFDT---ERLRIILEN-GIPV 122 (290)
Q Consensus 91 ~~-L~~----------~G~ir~iGvs~~~~---~~l~~~~~~-~~~~ 122 (290)
-+ +.+ .++|--||-.+..+ +.+..+++. |+.+
T Consensus 205 v~~l~~~~~~~~~~~~~~~VNIig~~~~~~gD~~elkrlL~~~Gi~v 251 (523)
T 3u7q_B 205 ARYFTLKSMDDKVVGSNKKINIVPGFETYLGNFRVIKRMLSEMGVGY 251 (523)
T ss_dssp HHHHHGGGGGGCCTTTTCCEEEECCSCCCHHHHHHHHHHHHHTTCCE
T ss_pred HHHhcccccccccCCCCCeEEEECCCCCChhHHHHHHHHHHHcCCeE
Confidence 32 222 35677787554324 455555554 5443
No 78
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=48.15 E-value=66 Score=28.57 Aligned_cols=111 Identities=8% Similarity=-0.087 Sum_probs=70.1
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEc-cCCCHH
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTE 110 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGv-s~~~~~ 110 (290)
+++-|...... ..+.+...+-++. |+.+ ++.++..|-.. +-++.+.++++.-.|--.+- +-++++
T Consensus 198 ~d~~l~vD~n~---~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~ 263 (392)
T 2poz_A 198 PEIELMVDLSG---GLTTDETIRFCRK-IGEL-----DICFVEEPCDP-----FDNGALKVISEQIPLPIAVGERVYTRF 263 (392)
T ss_dssp TTSEEEEECTT---CSCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCHHH
T ss_pred CCCEEEEECCC---CCCHHHHHHHHHH-HHhc-----CCCEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHH
Confidence 34556656532 4566666555544 6655 45567776432 23566777777655654443 345678
Q ss_pred HHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 111 RLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 111 ~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
.+..+++ ....+++|+..+-+-. ..-..+..+|+.+|+.++..+..
T Consensus 264 ~~~~~i~-~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 264 GFRKIFE-LQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHT-TTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHH-cCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 8888887 3457888887664311 12357899999999999987654
No 79
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=47.37 E-value=78 Score=27.83 Aligned_cols=99 Identities=11% Similarity=-0.010 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.+.+...+-++. |+.+++++ +..|-.. +-++.+.++++.-.|--+ |=+-++.+.+..+++. ...+++
T Consensus 202 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v 269 (371)
T 2ovl_A 202 WTVDGAIRAARA-LAPFDLHW-----IEEPTIP-----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRA-GSLTLP 269 (371)
T ss_dssp SCHHHHHHHHHH-HGGGCCSE-----EECCSCT-----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHH-TCCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCCE-----EECCCCc-----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHc-CCCCEE
Confidence 345554444433 55555443 3444321 224455556554344333 3334577888888774 346777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
|+..+-+-. ..-..+...|+.+|+.++..+.+
T Consensus 270 ~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 270 EPDVSNIGGYTTFRKVAALAEANNMLLTSHGVH 302 (371)
T ss_dssp CCCTTTTTSHHHHHHHHHHHHHTTCCEEECSCH
T ss_pred eeCccccCCHHHHHHHHHHHHHcCCeEccccHH
Confidence 776654311 11357899999999999987654
No 80
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=47.36 E-value=1.3e+02 Score=26.48 Aligned_cols=85 Identities=9% Similarity=0.052 Sum_probs=59.3
Q ss_pred CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCH
Q 022904 30 HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT 109 (290)
Q Consensus 30 ~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~ 109 (290)
...-++|.+|..-.+.....+.+.+.+.+..+..|....+++.+-. ..... ++++.+.+.++.+...|-.+|.+|-+.
T Consensus 96 ~~p~ilV~NK~DL~~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA-~~g~g-i~~L~~~l~~~~~~~~i~~vG~~nvGK 173 (368)
T 3h2y_A 96 NNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISA-AKGQG-IAELADAIEYYRGGKDVYVVGCTNVGK 173 (368)
T ss_dssp SSCEEEEEECGGGSCTTSCHHHHHHHHHHHHHHTTCCCSEEEECCT-TTCTT-HHHHHHHHHHHHTTSCEEEEEBTTSSH
T ss_pred CCcEEEEEEChhcCCcccCHHHHHHHHHHHHHHcCCCcccEEEEeC-CCCcC-HHHHHhhhhhhcccceEEEecCCCCCh
Confidence 4567889999975433345567777777777888864446655433 22233 688888888888788888999999987
Q ss_pred HHHHHHH
Q 022904 110 ERLRIIL 116 (290)
Q Consensus 110 ~~l~~~~ 116 (290)
+.+...+
T Consensus 174 StliN~L 180 (368)
T 3h2y_A 174 STFINRM 180 (368)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 7655544
No 81
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=46.11 E-value=42 Score=28.91 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCCcc----HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCe
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG----YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~~----~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
+.+.+.+..++.+ .-|.|.||+=--- .|...... +..+...++.+++.+. -|.|.++.++.++++++.+.++
T Consensus 44 ~~~~a~~~a~~~v-~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAERMI-AEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHHHH-HTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 4456666554443 5689999986532 23222111 3456666666665533 4888999999999999976443
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
. +..|... +.++++.+++.|++++.+..
T Consensus 121 I---NdVsg~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 I---NDIWGFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp E---EETTTTC---STTHHHHHSSSSCEEEEECC
T ss_pred E---EECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 3 2233322 34799999999999999753
No 82
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=45.71 E-value=85 Score=27.94 Aligned_cols=70 Identities=13% Similarity=-0.010 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 87 LNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.++++.-.|--. |=+-++++.+..+++. ...+++|+..+-+-. ..-..+...|+++|+.++.++..
T Consensus 260 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~~ 331 (398)
T 2pp0_A 260 IEGHAQLAAALDTPIATGEMLTSFREHEQLILG-NASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFAM 331 (398)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEeecCcc
Confidence 4455566655444333 3334567777777763 346666666543211 11357899999999999876543
No 83
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=45.43 E-value=1e+02 Score=26.40 Aligned_cols=97 Identities=14% Similarity=0.051 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEe-cC-----CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCe
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFH-WW-----DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p-----~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
.+.+.+..++.+ .-|.|.||+=--- .| +...+ +..+...++.+++++. -|.|.++.++.++++++.+..+
T Consensus 51 ~~~a~~~a~~~v-~~GAdIIDIGgeSTrPga~~v~~~eE-~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 126 (294)
T 2dqw_A 51 PERALERAREMV-AEGADILDLGAESTRPGAAPVPVEEE-KRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHL 126 (294)
T ss_dssp --CCHHHHHHHH-HHTCSEEEEECC-----------CCH-HHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHH-HHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCE
Confidence 344444443333 4589999987632 22 22333 6778888888887643 4888999999999999975443
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
. +..|.. .+.++++.+++.|++++.+.
T Consensus 127 I---NdVsg~---~d~~m~~v~a~~~~~vVlmh 153 (294)
T 2dqw_A 127 L---NDVTGL---RDERMVALAARHGVAAVVMH 153 (294)
T ss_dssp E---ECSSCS---CCHHHHHHHHHHTCEEEEEC
T ss_pred E---EECCCC---CChHHHHHHHHhCCCEEEEc
Confidence 2 233332 23589999999999999874
No 84
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=45.31 E-value=66 Score=28.35 Aligned_cols=86 Identities=12% Similarity=0.040 Sum_probs=53.4
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++.++..|-...+ ++.+.+|++.-.| -..|=+-++.+.+..+++. ..++++|+..+- -. ..-..+...|+
T Consensus 215 ~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~-GGit~~~~i~~~A~ 287 (365)
T 3ik4_A 215 IPMVLFEQPLPRED-----WAGMAQVTAQSGFAVAADESARSAHDVLRIARE-GTASVINIKLMK-AGVAEGLKMIAIAQ 287 (365)
T ss_dssp CCEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHH-TCCSEEEECHHH-HCHHHHHHHHHHHH
T ss_pred CCceEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHh-CCCCEEEEcCCc-cCHHHHHHHHHHHH
Confidence 46677776643322 3455556654333 3455566778888877763 246666766553 11 11356889999
Q ss_pred HhCCeEEeccccccc
Q 022904 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
.+|+.++..+.+..+
T Consensus 288 ~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 288 AAGLGLMIGGMVESI 302 (365)
T ss_dssp HHTCEEEECCSSCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999988766443
No 85
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=44.67 E-value=84 Score=27.94 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=44.0
Q ss_pred HHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEeccccccc
Q 022904 87 LNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.|--. |=+-++.+.+..+++. ...+++|+..+-.-. ..-..+...|+.+|+.++..+-+..|
T Consensus 229 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 229 LDGMARLRGKVATPIYADESAQELHDLLAIINK-GAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 4555566655444333 3334567777777763 346666665553211 11356899999999999998655443
No 86
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=44.64 E-value=1.8e+02 Score=26.36 Aligned_cols=95 Identities=9% Similarity=0.014 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccC--CCHHHHHHHHHcCCCeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~~ 125 (290)
+++.....+.+.++.+ ++++|-.|-...+ |+.+.+|.+..+|--.|=-. .+++.+..+++. --.+++
T Consensus 271 t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD-----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~-~a~d~i 339 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY-----PVVSIEDPFDQDD-----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEE-KACNCL 339 (439)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHT-TCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CCcEEECCCCccc-----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHh-CCCCEE
Confidence 6676666767777664 6889998865443 66777888887776665433 388999999984 347777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEe
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via 153 (290)
|+-.|-+-. ....++..+|+.+|+.++.
T Consensus 340 ~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 340 LLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 776653211 1235789999999998755
No 87
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=44.28 E-value=77 Score=27.51 Aligned_cols=103 Identities=8% Similarity=0.001 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.+.+...+-++. |+.++++ +.++..|-.. +-++.+.++++.-.|--. |=+-++.+.+..+++. ...+++
T Consensus 193 ~~~~~a~~~~~~-l~~~~i~---~~~iE~P~~~-----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~-~~~d~v 262 (345)
T 2zad_A 193 YTQKEAVEFARA-VYQKGID---IAVYEQPVRR-----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKE-EAVDYV 262 (345)
T ss_dssp SCHHHHHHHHHH-HHHTTCC---CSEEECCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHH-TCCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCC---eeeeeCCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHh-CCCCEE
Confidence 345554444333 5555443 1134454321 224455555555444332 3334567777777763 336666
Q ss_pred eccccccccChhhhHHHHHHHhCCeEEecccccc
Q 022904 126 QVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 126 q~~~n~~~~~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
|+..+----..-..+...|+.+|+.++..+.+..
T Consensus 263 ~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 296 (345)
T 2zad_A 263 NIKLMKSGISDALAIVEIAESSGLKLMIGCMGES 296 (345)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTTCEEEECCSSCC
T ss_pred EEecccccHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 6644320011124688999999999998876533
No 88
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=43.94 E-value=1.6e+02 Score=25.38 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC-----c---cHHHHHHHHHHHHHc-CCccEEEccCCC--------
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN-----P---GYLDALNHLTDLKEE-GKIKTVALTNFD-------- 108 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~-----~---~~~~~~~~l~~L~~~-G~ir~iGvs~~~-------- 108 (290)
+.+++.+...+.... .+|++ .++.|-.-.+.. + .+....+.++.+++. |.=-.||+..+.
T Consensus 82 ~~~~~~l~~~L~~~~-~~GI~--niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~ 158 (310)
T 3apt_A 82 GQSRKEVAEVLHRFV-ESGVE--NLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESES 158 (310)
T ss_dssp TSCHHHHHHHHHHHH-HTTCC--EEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSC
T ss_pred CCCHHHHHHHHHHHH-HCCCC--EEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCC
Confidence 446777777777644 88876 456665421111 0 022344445555555 642488988653
Q ss_pred H-HHHHHHHHc---CCCeeeeeccccccccChhhhHHHHHHHhCCe
Q 022904 109 T-ERLRIILEN---GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 150 (290)
Q Consensus 109 ~-~~l~~~~~~---~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 150 (290)
. ..+..+.+. |-.+.+.|.-|++ ... ..+++.|++.||.
T Consensus 159 ~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~--~~~-~~f~~~~r~~Gi~ 201 (310)
T 3apt_A 159 LEADLRHFKAKVEAGLDFAITQLFFNN--AHY-FGFLERARRAGIG 201 (310)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCSCH--HHH-HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEecccCCH--HHH-HHHHHHHHHcCCC
Confidence 2 245555544 7789999999987 333 4788999999864
No 89
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=43.85 E-value=15 Score=23.37 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHcCCccE
Q 022904 83 YLDALNHLTDLKEEGKIKT 101 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~ir~ 101 (290)
-+++++.|..|.++|+|+-
T Consensus 39 kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCCeec
Confidence 4799999999999999973
No 90
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=43.75 E-value=81 Score=28.13 Aligned_cols=86 Identities=12% Similarity=0.019 Sum_probs=52.0
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++.++-.|-...+ ++.+.+|++.-.| -+.|=+-++...+..+++. ..++++|+...- -. ..-..+...|+
T Consensus 245 ~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~d~i~~k~~~-GGit~~~~ia~~A~ 317 (393)
T 3u9i_A 245 IVPALFEQPVAKDD-----EEGLRRLTATRRVPVAADESVASATDAARLARN-AAVDVLNIKLMK-CGIVEALDIAAIAR 317 (393)
T ss_dssp CCCSEEECCSCTTC-----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHH-HCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHc-CCCCEEEecccc-cCHHHHHHHHHHHH
Confidence 35555555533222 2344455554333 3556667788888888773 346777776654 11 11356889999
Q ss_pred HhCCeEEeccccccc
Q 022904 146 LTGVKLITYGTVMGG 160 (290)
Q Consensus 146 ~~gi~via~spl~~G 160 (290)
.+|+.++..+.+..+
T Consensus 318 ~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 318 TAGLHLMIGGMVESL 332 (393)
T ss_dssp HHTCEEEECCSSCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999988766443
No 91
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=43.02 E-value=68 Score=28.28 Aligned_cols=72 Identities=8% Similarity=0.046 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.++++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+.+..
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 297 (368)
T 3q45_A 224 YTALPKIRQACRIPIMADESCCNSFDAERLIQI-QACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLES 297 (368)
T ss_dssp GGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCC
T ss_pred HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 34455566554333 334455778888888873 357777777654311 1235789999999999998766543
No 92
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=42.97 E-value=1.1e+02 Score=27.50 Aligned_cols=87 Identities=8% Similarity=0.003 Sum_probs=53.3
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQL 146 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~ 146 (290)
.++.++-.|-...+ ++.+.+|++.-.| -..|=+-++...+..+++. ..++++|....----..-..+...|+.
T Consensus 258 ~~l~~iEqP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~div~~d~~~GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 258 HGLWFAEAPVRTED-----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVAR-RALAIVQPEMGHKGITQFMRIGAYAHV 331 (412)
T ss_dssp GCEEEEECCSCTTC-----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecCCCCccc-----hHHHHHHHhhcCCccccCCcccchHhHHHHHHc-CCCCEEEecCCCCChHHHHHHHHHHHH
Confidence 34555655543322 3455566665443 2456667788888888774 346777766431000113467889999
Q ss_pred hCCeEEeccccccc
Q 022904 147 TGVKLITYGTVMGG 160 (290)
Q Consensus 147 ~gi~via~spl~~G 160 (290)
+|+.++..++++.|
T Consensus 332 ~gi~v~~h~~~~~~ 345 (412)
T 4h1z_A 332 HHIKVIPHATIGAG 345 (412)
T ss_dssp TTCEECCCCCSSCS
T ss_pred CCCcEEecCCcchH
Confidence 99999998877654
No 93
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=42.30 E-value=2e+02 Score=26.10 Aligned_cols=106 Identities=10% Similarity=0.059 Sum_probs=59.4
Q ss_pred hhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCC-cccEEEEecCCCCCccHHHHHHHHHH
Q 022904 14 LKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVP-CLDMLQFHWWDYSNPGYLDALNHLTD 92 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d-~iDl~~lH~p~~~~~~~~~~~~~l~~ 92 (290)
.|+-|-++|+++.++.+.+=|+|.|=+-+.- -.+++..-+++.-++.... -+.++.+|.|..........-.+++.
T Consensus 80 g~~~L~~aI~~~~~~~~P~~I~V~tTC~~e~---IGdDi~~v~~~~~~~~~~~~~~pvi~v~tpgf~gs~~~G~~~a~~a 156 (458)
T 1mio_B 80 GGSNIKTAVKNIFSLYNPDIIAVHTTCLSET---LGDDLPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQG 156 (458)
T ss_dssp SHHHHHHHHHHHHHHTCCSEEEEEECHHHHH---HTCCHHHHHHHHHHTTCSCTTCEEEEECCCTTSSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEECCcHHHH---HhcCHHHHHHHHHHhcCCCCCCeEEEEECCCCcccHHHHHHHHHHH
Confidence 4566677888887776667788888774311 1133444444444444221 47899999987765433333333333
Q ss_pred HHH---------cCCccEEEccCCCHH---HHHHHHHc-CCCee
Q 022904 93 LKE---------EGKIKTVALTNFDTE---RLRIILEN-GIPVV 123 (290)
Q Consensus 93 L~~---------~G~ir~iGvs~~~~~---~l~~~~~~-~~~~~ 123 (290)
+.+ .++|--||-.+. +. .+..+++. |+.+.
T Consensus 157 l~~~l~~~~~~~~~~VNilg~~~~-~~d~~eik~lL~~~Gi~v~ 199 (458)
T 1mio_B 157 IVNYLSENTGAKNGKINVIPGFVG-PADMREIKRLFEAMDIPYI 199 (458)
T ss_dssp HHHHHCCCCSCCCSCEEEECCSCC-HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHccccCCCCCcEEEECCCCC-HHHHHHHHHHHHHcCCcEE
Confidence 322 356777875543 44 45555554 55443
No 94
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=42.11 E-value=1.2e+02 Score=26.21 Aligned_cols=98 Identities=8% Similarity=-0.014 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhhhCCCcccEEEE-ecCCCCCccHHHHHHHHHHHHHc-CCccEEEc-cC----CCHHHHHHHHHcCC--C
Q 022904 51 IVRESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEE-GKIKTVAL-TN----FDTERLRIILENGI--P 121 (290)
Q Consensus 51 ~i~~~~~~SL~~Lg~d~iDl~~l-H~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGv-s~----~~~~~l~~~~~~~~--~ 121 (290)
.+.+...+.. ..|.|.||+=.- -.|+......++.++.++.+++. +.. |.| .+ +.++.++++++.+. +
T Consensus 75 ~~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 75 DPVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp CHHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCC
Confidence 3344444444 789999998764 23544333357777888888876 443 555 55 78899999998743 2
Q ss_pred eeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 122 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 122 ~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+-++-+. .. ...++++.|++.|.+++.+.+
T Consensus 152 ~iINdvs--~~---~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 152 CLLSSAT--KD---NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp CEEEEEC--TT---THHHHHHHHHHHTCEEEEECS
T ss_pred CEEEECC--CC---ccHHHHHHHHHhCCCEEEECh
Confidence 3333222 21 235799999999999999875
No 95
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=41.84 E-value=54 Score=28.90 Aligned_cols=72 Identities=6% Similarity=-0.012 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeeccccccccCh-hhhHHHHHHHhCCeEEeccccccc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~via~spl~~G 160 (290)
++.+.++++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-. .-. -..+...|+.+|+.++..+.+..+
T Consensus 225 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 225 VLSRRRLVGQLDMPFIADESVPTPADVTREVLG-GSATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHH-TSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc-CCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECCcCCcH
Confidence 45566777765554 345556788888888874 3477778876654 322 356899999999999987655443
No 96
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=41.70 E-value=73 Score=28.34 Aligned_cols=111 Identities=8% Similarity=-0.031 Sum_probs=69.6
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEc-cCCCHH
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTE 110 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGv-s~~~~~ 110 (290)
+++-|.-.... .++.+...+-++. |+.+ ++.++..|-.. +-++.+.++++.-.|--.+- +-++++
T Consensus 208 ~d~~l~vDan~---~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~ 273 (403)
T 2ox4_A 208 PDVDIIVENHG---HTDLVSAIQFAKA-IEEF-----NIFFYEEINTP-----LNPRLLKEAKKKIDIPLASGERIYSRW 273 (403)
T ss_dssp TTSEEEEECTT---CSCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TSTHHHHHHHHTCCSCEEECTTCCHHH
T ss_pred CCCeEEEECCC---CCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh-----hhHHHHHHHHHhCCCCEEecCCcCCHH
Confidence 35566656532 4466666655554 6655 45566766432 23556777777755654443 335678
Q ss_pred HHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 111 RLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 111 ~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+..
T Consensus 274 ~~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 274 GFLPFLED-RSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHHT-TCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 88888873 457777777654211 12357899999999999987663
No 97
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=41.51 E-value=1.1e+02 Score=27.40 Aligned_cols=111 Identities=7% Similarity=-0.006 Sum_probs=70.7
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEE-ccCCCHH
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTE 110 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iG-vs~~~~~ 110 (290)
+++-|.-.... .++.+...+-++. |+.++++ ++..|-.. +-++.+.++++.-.|--.+ =+-++.+
T Consensus 209 ~d~~l~vDan~---~~~~~~a~~~~~~-l~~~~i~-----~iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~ 274 (410)
T 2qq6_A 209 PEVEVAIDMHG---RFDIPSSIRFARA-MEPFGLL-----WLEEPTPP-----ENLDALAEVRRSTSTPICAGENVYTRF 274 (410)
T ss_dssp SSSEEEEECTT---CCCHHHHHHHHHH-HGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEECTTCCSHH
T ss_pred CCCEEEEECCC---CCCHHHHHHHHHH-HhhcCCC-----eEECCCCh-----hhHHHHHHHHhhCCCCEEeCCCcCCHH
Confidence 34556556542 4567776666544 7777655 45566432 2356677777765554443 3446889
Q ss_pred HHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 111 RLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 111 ~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+..
T Consensus 275 ~~~~~i~~-~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 275 DFRELFAK-RAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHT-TCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 99999883 457888877654211 11357889999999999987653
No 98
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=41.26 E-value=2e+02 Score=25.89 Aligned_cols=137 Identities=7% Similarity=0.011 Sum_probs=75.0
Q ss_pred hhHHhhhchHHHhhhCCCCc--EEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHH
Q 022904 14 LKISMASSSIEFVERGHQSS--WISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLT 91 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~R~~--~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~ 91 (290)
.++-|-++|+++. +.+.+= |+|.|=+-+.--+ +++..-+++.-+++. .-+.++.+|.|..........-.+++
T Consensus 98 g~~kL~~aI~~~~-~~~P~~~~I~V~tTC~~e~IG---dDi~~v~~~~~~~~~-~~~pVi~v~t~gf~g~~~~G~~~a~~ 172 (437)
T 3aek_A 98 AHKELDREVAKLL-ERRPDIRQLFLVGSCPSEVLK---LDLDRAAERLSGLHA-PHVRVYSYTGSGLDTTFTQGEDTCLA 172 (437)
T ss_dssp HHHHHHHHHHHHH-HTCTTCCEEEEEECHHHHHTT---CCHHHHHHHHHHHST-TTCEEEEEECCTTTCCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HhCCCccEEEEEcCCHHHHhh---cCHHHHHHHHHHhcC-CCCeEEEeECCCCCCcHHHHHHHHHH
Confidence 3445688888887 666666 8888877542112 344444444444441 13689999998766443444444555
Q ss_pred HHHH------cCCccEEEccCCCH---HHHHHHHHc-CCCeeeeec-------------cccccccChhhhHHHHHHHhC
Q 022904 92 DLKE------EGKIKTVALTNFDT---ERLRIILEN-GIPVVSNQV-------------QHSVVDMRPQQKMAELCQLTG 148 (290)
Q Consensus 92 ~L~~------~G~ir~iGvs~~~~---~~l~~~~~~-~~~~~~~q~-------------~~n~~~~~~~~~~~~~~~~~g 148 (290)
.+.+ .++|--||- +.. +.+.++++. ++.+..+-- .+|+..........+..++.|
T Consensus 173 al~~~~~~~~~~~VNilG~--~~~~~~~eik~lL~~~Gi~v~~~~~~~~~~ei~~~~~A~~niv~~~~~~~~A~~Le~~G 250 (437)
T 3aek_A 173 AMVPTLDTTEAAELIVVGA--LPDVVEDQCLSLLTQLGVGPVRMLPARRSDIEPAVGPNTRFILAQPFLGETTGALERRG 250 (437)
T ss_dssp HHGGGSCBCCCCCEEEESC--CCHHHHHHHHHHHHHTTCCCEEEESCSSGGGCCCBCTTCEEEESSTTCHHHHHHHHHTT
T ss_pred HHHHHhcccCCCcEEEEeC--CChhHHHHHHHHHHHcCCceEEEcCCCCHHHHHhhhcCcEEEEECccHHHHHHHHHHcC
Confidence 5544 467888884 332 456666664 544332111 012211111123334447788
Q ss_pred CeEEec-ccc
Q 022904 149 VKLITY-GTV 157 (290)
Q Consensus 149 i~via~-spl 157 (290)
+.++.. .|+
T Consensus 251 iP~i~~~~P~ 260 (437)
T 3aek_A 251 AKRIAAPFPF 260 (437)
T ss_dssp CEECCCCCSC
T ss_pred CCeEecCCCc
Confidence 988875 344
No 99
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=41.01 E-value=37 Score=27.63 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=36.0
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhc
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~ 256 (290)
..|-.+.|++|+++++.-..++.|+..+..+|.-.|+..+-
T Consensus 74 D~TD~e~Al~~a~~~~~~~I~i~Ga~GgR~DH~lani~ll~ 114 (212)
T 3l8m_A 74 DDTDLALGIDQAVKRGYRNIDVYGATGGRLDHFMGALQILE 114 (212)
T ss_dssp CBCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEcCCCCchhHHHHHHHHHH
Confidence 56888999999999988888899999999999999987653
No 100
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.85 E-value=71 Score=25.46 Aligned_cols=65 Identities=12% Similarity=0.196 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHc-CCccEEEccCCC--HHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEe
Q 022904 83 YLDALNHLTDLKEE-GKIKTVALTNFD--TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 83 ~~~~~~~l~~L~~~-G~ir~iGvs~~~--~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
.-+++.+|..+++. ++|-.+|+.|.. ...+..++ + .++.+..|+- ...-...+..+++.|+.++.
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll--~--~~i~~~~~~~--~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML--G--VKIKEFLFSS--EDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH--T--CEEEEEEECS--GGGHHHHHHHHHHTTCCEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh--C--CceEEEEeCC--HHHHHHHHHHHHHCCCeEEE
Confidence 46899999999986 567778887753 45555665 3 3444555543 22235789999999999976
No 101
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=40.37 E-value=77 Score=28.09 Aligned_cols=96 Identities=8% Similarity=0.086 Sum_probs=0.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeecccccc-
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV- 132 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~- 132 (290)
.+-+.|+.+++++|. ++..+ +-++.+.+|++. +.--..|=+-++.+.+..+++ ....+++|+..+-+
T Consensus 212 ~~~~~l~~~~i~~iE-------qP~~~---~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~-~~~~d~v~~k~~~~G 280 (383)
T 3i4k_A 212 HYLPILAEAGVELFE-------QPTPA---DDLETLREITRRTNVSVMADESVWTPAEALAVVK-AQAADVIALKTTKHG 280 (383)
T ss_dssp HHHHHHHHTTCCEEE-------SCSCT---TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHH-HTCCSEEEECTTTTT
T ss_pred HHHHHHHhcCCCEEE-------CCCCh---hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHH-cCCCCEEEEcccccC
Q ss_pred ccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 133 DMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
--..-..+...|+.+|+.++..+.+..++
T Consensus 281 Git~~~~ia~~A~~~gi~~~~~~~~es~i 309 (383)
T 3i4k_A 281 GLLESKKIAAIAEAGGLACHGATSLEGPI 309 (383)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCSCCCHH
T ss_pred CHHHHHHHHHHHHHcCCeEEeCCCCccHH
No 102
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=39.96 E-value=1.2e+02 Score=25.81 Aligned_cols=100 Identities=8% Similarity=0.028 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCCcc----HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCe
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG----YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~~----~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
+.+...+..++.+ .=|.|.||+=--- +|...... +..+...++.+++.+- .|.|.++.++.++++++.+..+
T Consensus 28 ~~~~a~~~a~~m~-~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa~i 104 (270)
T 4hb7_A 28 NVETAINRVKAMI-DEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGVDM 104 (270)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhccce
Confidence 3455555555444 3488888873211 23222221 3456667777765543 5889999999999999976543
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
. ...+.. ..+.++++.+++.|++++.+.
T Consensus 105 I---NDVs~g--~~d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 105 I---NDQWAG--LYDHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp E---EETTTT--SSCTHHHHHHHHTTCEEEEEC
T ss_pred e---cccccc--ccchhHHHHHHHcCCCeEEec
Confidence 2 122221 224579999999999999875
No 103
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=39.74 E-value=2.3e+02 Score=26.09 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=78.3
Q ss_pred hhHHhhhchHHHhhhCC-CCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCC-ccH---HHHHH
Q 022904 14 LKISMASSSIEFVERGH-QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN-PGY---LDALN 88 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~-R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~-~~~---~~~~~ 88 (290)
.|+-|-++|+++.++.+ .+-|+|.|=+-+.--+ +++..-+++.-++++ ++++.+|.|.... ... +.+++
T Consensus 127 g~~kL~~~I~~~~~~~~~P~~I~V~tTC~~e~IG---dDl~~v~~~~~~~~~---~pVi~v~tpgf~g~s~~~G~~~a~~ 200 (492)
T 3u7q_A 127 GDKKLAKLIDEVETLFPLNKGISVQSECPIGLIG---DDIESVSKVKGAELS---KTIVPVRCEGFRGVSQSLGHHIAND 200 (492)
T ss_dssp SHHHHHHHHHHHHHHCTTCCCEEEEECTHHHHTT---CCHHHHHHHHHHHHT---CCEEEECCCTTSSSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEEECCcHHHHHh---cCHHHHHHHHHHhhC---CcEEEecCCCCCCCchhHHHHHHHH
Confidence 46666778888877776 6788888887542222 334444444444455 5799999998776 422 23344
Q ss_pred HHHH-HHHc-----------CCccEEEccCC--CHHHHHHHHHc-CCCeeeeec--------------cccccccC-hhh
Q 022904 89 HLTD-LKEE-----------GKIKTVALTNF--DTERLRIILEN-GIPVVSNQV--------------QHSVVDMR-PQQ 138 (290)
Q Consensus 89 ~l~~-L~~~-----------G~ir~iGvs~~--~~~~l~~~~~~-~~~~~~~q~--------------~~n~~~~~-~~~ 138 (290)
+|-+ +.+. +.|--||-.++ +.+.+..+++. ++.+...-. .+|+.... ...
T Consensus 201 al~~~l~~~~~~~~~~~~~~~~VNIiG~~~~~gD~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~~~~A~~niv~~~~~~~ 280 (492)
T 3u7q_A 201 AVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGDAWSSRILLEEMGLRCVAQWSGDGSISEIELTPKVKLNLVHCYRSMN 280 (492)
T ss_dssp HHHHHTTTTTTTCCCCCCCTTEEEEEEECCBTTTTHHHHHHHHHTTCEEEEEEETTCCHHHHHHGGGCSEEEESCHHHHH
T ss_pred HHHHHHhhhcccccccCCCCCcEEEECCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhhcCcEEEEEChHHHH
Confidence 4443 4322 35667885543 45778888875 554332211 12322111 122
Q ss_pred hHHHHH-HHhCCeEEecccc
Q 022904 139 KMAELC-QLTGVKLITYGTV 157 (290)
Q Consensus 139 ~~~~~~-~~~gi~via~spl 157 (290)
...++. ++.|+.++...|+
T Consensus 281 ~~A~~Le~~~GiP~i~~~p~ 300 (492)
T 3u7q_A 281 YISRHMEEKYGIPWMEYNFF 300 (492)
T ss_dssp HHHHHHHHHHCCCEEECCCS
T ss_pred HHHHHHHHHhCCceEecCcc
Confidence 334444 4669999987765
No 104
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=39.29 E-value=99 Score=27.05 Aligned_cols=98 Identities=7% Similarity=0.010 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHHHcCCCeeee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKT-VALTNFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~~ 125 (290)
.+.+. .+-+ +.|+.++++ ++..|-.. +.++.+.++++.-.|-- .|=+-++++.+..+++. ...+++
T Consensus 194 ~~~~~-~~~~-~~l~~~~i~-----~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v 260 (368)
T 1sjd_A 194 YTLGD-APQL-ARLDPFGLL-----LIEQPLEE-----EDVLGHAELARRIQTPICLDESIVSARAAADAIKL-GAVQIV 260 (368)
T ss_dssp CCGGG-HHHH-HTTGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHT-TCCSEE
T ss_pred CCHHH-HHHH-HHHHhcCCC-----eEeCCCCh-----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc-CCCCEE
Confidence 34444 3333 335555544 45555322 23556677776644433 33445688889988873 457777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
|+..+-.-. ..-..+...|+.+|+.++.-+-+
T Consensus 261 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 261 NIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp EECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 876654311 11357899999999996543333
No 105
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=39.04 E-value=34 Score=19.85 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=16.3
Q ss_pred CHhHHHH-----hHhhhcCCCCHHHHHHH
Q 022904 244 LAEHIQD-----TNAIFMLSLDEDDVNSI 267 (290)
Q Consensus 244 ~~~~l~e-----nl~a~~~~Lt~e~~~~l 267 (290)
+++++.. -+...+.+||+|+++.+
T Consensus 3 tpe~~~~~~~~~ei~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 3 TPEQLQAWRWEREIDERNRPLSDEELDAM 31 (39)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHT
T ss_pred CHHHHHHHHhhccchhhcCCCCHHHHHHh
Confidence 4555554 45566779999988764
No 106
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=38.92 E-value=72 Score=25.73 Aligned_cols=73 Identities=7% Similarity=-0.063 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHHHcCCCeeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~q 126 (290)
+.++++.. ..+|.||+=+.+. -+.+.... .+....|.... ...+..+||. |-+++.+.++.+ ...++++|
T Consensus 11 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~-~~~ld~vQ 81 (205)
T 1nsj_A 11 NLEDALFS-----VESGADAVGFVFY-PKSKRYIS-PEDARRISVEL-PPFVFRVGVFVNEEPEKILDVAS-YVQLNAVQ 81 (205)
T ss_dssp SHHHHHHH-----HHHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHH-HHTCSEEE
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHH-hhCCCEEE
Confidence 45555543 4789999888843 22333322 23333333222 2468899986 578888888887 45789999
Q ss_pred ccc
Q 022904 127 VQH 129 (290)
Q Consensus 127 ~~~ 129 (290)
++-
T Consensus 82 LHG 84 (205)
T 1nsj_A 82 LHG 84 (205)
T ss_dssp ECS
T ss_pred ECC
Confidence 874
No 107
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=38.87 E-value=67 Score=28.19 Aligned_cols=70 Identities=10% Similarity=0.156 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCccEEE-ccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 87 LNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+.++++.-.|--.+ =+-++++.+..+++. ...+++|+..+-+-. ..-..+...|+++|+.++..+.+
T Consensus 226 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 297 (369)
T 2p8b_A 226 IDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKL-EAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMV 297 (369)
T ss_dssp HHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCC
Confidence 45566666654443332 334567777777763 346666665543211 11356889999999999887654
No 108
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=38.21 E-value=1e+02 Score=27.53 Aligned_cols=91 Identities=11% Similarity=-0.062 Sum_probs=57.7
Q ss_pred HHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-C
Q 022904 58 VSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-R 135 (290)
Q Consensus 58 ~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~ 135 (290)
+.|+.+++++ +..|-.. +-++.+.+|++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. .
T Consensus 225 ~~l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit 293 (400)
T 3mwc_A 225 KAMDAAKCLF-----HEQPLHY-----EALLDLKELGERIETPICLDESLISSRVAEFVAKL-GISNIWNIKIQRVGGLL 293 (400)
T ss_dssp HHHGGGCCSC-----EESCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHHHTSHH
T ss_pred HHHHhcCCCE-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc-CCCCEEEEcchhhCCHH
Confidence 4566655444 4455332 2355666777754443 445566788989888874 357777777654311 1
Q ss_pred hhhhHHHHHHHhCCeEEecccccc
Q 022904 136 PQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 136 ~~~~~~~~~~~~gi~via~spl~~ 159 (290)
.-..+...|+.+|+.++..+.+..
T Consensus 294 ~~~~ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 294 EAIKIYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHHHHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHHHHHcCCEEEecCCCCC
Confidence 235789999999999988765433
No 109
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.93 E-value=1.3e+02 Score=24.43 Aligned_cols=108 Identities=8% Similarity=0.115 Sum_probs=50.8
Q ss_pred EEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecC---------CCCCccHHHHHHHHH-HHHHcCCccEEE
Q 022904 34 WISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW---------DYSNPGYLDALNHLT-DLKEEGKIKTVA 103 (290)
Q Consensus 34 ~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p---------~~~~~~~~~~~~~l~-~L~~~G~ir~iG 103 (290)
+=++|-.... .+ +.+.++ .++++|.+.|.+...+.+ ..... .+..+.+. .+.+.|. +..+
T Consensus 12 lg~~~~~~~~---~~---~~~~l~-~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gl-~i~~ 81 (262)
T 3p6l_A 12 LGMQSYSFHL---FP---LTEALD-KTQELGLKYIEIYPGHKLGGKWGDKVFDFNLD--AQTQKEIKELAASKGI-KIVG 81 (262)
T ss_dssp EEEEGGGGTT---SC---HHHHHH-HHHHTTCCEEEECTTEECCGGGTTCEESTTCC--HHHHHHHHHHHHHTTC-EEEE
T ss_pred EEEEecccCC---CC---HHHHHH-HHHHcCCCEEeecCCcccccccccccccccCC--HHHHHHHHHHHHHcCC-eEEE
Confidence 4555555432 22 333333 356789999988765421 11112 23334444 4445554 4444
Q ss_pred ccCC---CHHHHHHHHHc----CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccc
Q 022904 104 LTNF---DTERLRIILEN----GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 104 vs~~---~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl 157 (290)
++.+ ..+.+...++. +.+..++... ... -+.+.+.|+++||.+ ++.+.
T Consensus 82 ~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~----~~~-~~~l~~~a~~~gv~l-~~En~ 136 (262)
T 3p6l_A 82 TGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA----LSD-WDLVEKLSKQYNIKI-SVHNH 136 (262)
T ss_dssp EEEECCSSTTHHHHHHHHHHHTTCSEEEECCC----GGG-HHHHHHHHHHHTCEE-EEECC
T ss_pred EeccCCccHHHHHHHHHHHHHcCCCEEEecCC----HHH-HHHHHHHHHHhCCEE-EEEeC
Confidence 4322 23344444443 4443333211 111 246777777778753 44455
No 110
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=37.57 E-value=2e+02 Score=24.85 Aligned_cols=108 Identities=14% Similarity=0.071 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHH--HHHHHHHHHHHcCCccEEEcc---CCCHHHHHHHHHc-C
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYL--DALNHLTDLKEEGKIKTVALT---NFDTERLRIILEN-G 119 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~--~~~~~l~~L~~~G~ir~iGvs---~~~~~~l~~~~~~-~ 119 (290)
.++.+.. ..+-+.|.++|+++|-+-+.-+|........ .-++.|..+++...++.-.+. |..++.+..+... .
T Consensus 20 ~~~~~~k-~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~ 98 (320)
T 3dxi_A 20 DFNSKIV-DAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPII 98 (320)
T ss_dssp CCCHHHH-HHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGT
T ss_pred cCCHHHH-HHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhh
Confidence 3444444 4555678899999999988765543211110 014455555543445555543 2333445554333 2
Q ss_pred CCeeeeeccccccccChhhhHHHHHHHhCCeEEec
Q 022904 120 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 120 ~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
..++.+.+..++-+.....+.+++++++|+.+...
T Consensus 99 ~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 99 GLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 23444444444422222346788899999887653
No 111
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=37.27 E-value=1.2e+02 Score=27.02 Aligned_cols=67 Identities=10% Similarity=0.175 Sum_probs=41.0
Q ss_pred HHHHHHHHH-cCCccEEE-ccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEec
Q 022904 87 LNHLTDLKE-EGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 87 ~~~l~~L~~-~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
++.+.++++ .-.|--++ =+-++.+.+..+++. ...+++|+..+-+-. ..-..+..+|+.+|+.++..
T Consensus 235 ~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 235 LAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDY-GRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHH-SCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHC-CCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 455666665 44443333 233567777777763 346666666554211 11356899999999999977
No 112
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=37.17 E-value=1.9e+02 Score=25.55 Aligned_cols=95 Identities=15% Similarity=0.029 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcC-CccEE-EccCCCHHHHHHHHHcCCCee
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTV-ALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G-~ir~i-Gvs~~~~~~l~~~~~~~~~~~ 123 (290)
..+.+...+-++. |+..| +|+.++..|-.. +.++.+.++++.- .|--. |=+- +.+.+..+++. ...+
T Consensus 200 ~~~~~~a~~~~~~-l~~~g---~~i~~iEqP~~~-----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~-~~~d 268 (389)
T 2oz8_A 200 AWTSKEALTKLVA-IREAG---HDLLWVEDPILR-----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEA-HAAD 268 (389)
T ss_dssp CBCHHHHHHHHHH-HHHTT---CCCSEEESCBCT-----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHT-TCCS
T ss_pred CCCHHHHHHHHHH-HHhcC---CCceEEeCCCCC-----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHc-CCCC
Confidence 3456665555544 66622 233455655332 2355667777764 44333 3334 78888888873 4577
Q ss_pred eeeccccccccChhhhHHHHHHHhCCeEEec
Q 022904 124 SNQVQHSVVDMRPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 124 ~~q~~~n~~~~~~~~~~~~~~~~~gi~via~ 154 (290)
++|+. .- -..-..+...|+.+|+.++..
T Consensus 269 ~v~ik-GG--it~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 269 ILNVH-GQ--VTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EEEEC-SC--HHHHHHHHHHHHHHTCCEEEC
T ss_pred EEEEC-cC--HHHHHHHHHHHHHcCCeEeec
Confidence 77776 11 111357899999999999988
No 113
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=35.85 E-value=2.2e+02 Score=26.44 Aligned_cols=107 Identities=9% Similarity=0.017 Sum_probs=55.8
Q ss_pred hhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCC-cccEEEEecCCCCCccH---HHHHHH
Q 022904 14 LKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVP-CLDMLQFHWWDYSNPGY---LDALNH 89 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d-~iDl~~lH~p~~~~~~~---~~~~~~ 89 (290)
.++-|-++|+++.+..+.+-|+|.|=+-+.--+ +++..-+++.-++-++. -+.++.+|.|....... +.++.+
T Consensus 125 g~~kL~~aI~~~~~~~~P~~I~V~tTC~~eiIG---dDi~~v~~~~~~~~~~p~g~pVi~v~tpgf~gs~~~G~~~a~~a 201 (519)
T 1qgu_B 125 GNNNMNLGLQNASALYKPEIIAVSTTCMAEVIG---DDLQAFIANAKKDGFVDSSIAVPHAHTPSFIGSHVTGWDNMFEG 201 (519)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEEECHHHHHHT---CCHHHHHHHHHHTTSSCTTSBCCBCCCCTTSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCcHHHhC---CCHHHHHHHHHHhcCCCCCCcEEEeeCCCcCCChhHHHHHHHHH
Confidence 344567778888766666778888877431111 23333333333331121 47899999987765433 333444
Q ss_pred HHH-HHH--c------CCccEEEccCCCH---HHHHHHHHc-CCCee
Q 022904 90 LTD-LKE--E------GKIKTVALTNFDT---ERLRIILEN-GIPVV 123 (290)
Q Consensus 90 l~~-L~~--~------G~ir~iGvs~~~~---~~l~~~~~~-~~~~~ 123 (290)
|-+ +.+ . ++|--||-.+..+ +.+..+++. |+.+.
T Consensus 202 l~~~l~~~~~~~~~~~~~VNIlg~~~~~~gD~~eik~lL~~~Gi~v~ 248 (519)
T 1qgu_B 202 FAKTFTADYQGQPGKLPKLNLVTGFETYLGNFRVLKRMMEQMAVPCS 248 (519)
T ss_dssp HHHHHHTTCCCCTTSEEEEEEECCSCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHhhccccccCCCCCcEEEECCCCCCcccHHHHHHHHHHcCCeEE
Confidence 333 322 1 2345576543213 455555554 55443
No 114
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=35.11 E-value=72 Score=26.33 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=16.3
Q ss_pred hhhHHHHHHHhCCeEEecc
Q 022904 137 QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 137 ~~~~~~~~~~~gi~via~s 155 (290)
..++++.|+++|+.|.+|.
T Consensus 193 ~~~~v~~~~~~G~~V~~WT 211 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWA 211 (250)
T ss_dssp CHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHCCCEEEEEe
Confidence 3578999999999999994
No 115
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=35.09 E-value=1.4e+02 Score=26.88 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCC-ccE-EEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEec
Q 022904 87 LNHLTDLKEEGK-IKT-VALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 87 ~~~l~~L~~~G~-ir~-iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
++.+.++++.-. |-- .|=+-++.+.+..+++ ....+++|+..+-.-. ..-..+...|+.+|+.++..
T Consensus 269 ~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~-~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 269 FASYREVAKITPLVPIAAGENHYTRFEFGQMLD-AGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHT-TCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHH-hCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 445555655433 332 2333456777777776 3357777776654211 11357899999999998887
No 116
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=34.88 E-value=1.5e+02 Score=27.26 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=60.1
Q ss_pred ChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHH---HHHH
Q 022904 12 GLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYL---DALN 88 (290)
Q Consensus 12 G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~---~~~~ 88 (290)
|..|+-|-++|+++.++.+.+-|+|.|=+-+.--+ +++..-+++.-++.+ +.++.+|.|........ .+++
T Consensus 104 G~g~~kL~~~I~~~~~~~~P~~I~V~tTC~~e~IG---dDl~~v~~~~~~~~~---~pVi~v~tpgf~gs~~~G~~~a~~ 177 (483)
T 3pdi_A 104 GRAEKRLFHAIRQAVESYSPPAVFVYNTCVPALIG---DDVDAVCKAAAERFG---TPVIPVDSAGFYGTKNLGNRIAGE 177 (483)
T ss_dssp SHHHHHHHHHHHHHHHHHCCSCEEEECCHHHHHTT---CCHHHHHHHHHHHHC---SCEEEECCCGGGCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcCCCEEEEECCchHHHhc---CCHHHHHHHHHHHhC---CCEEEEeCCCcccchhhHHHHHHH
Confidence 45677777888888777677888888877542222 344444444445555 46889998866543222 2333
Q ss_pred HHH-HHHHc-----------------CCccEEEccCC--CHHHHHHHHHc-CCC
Q 022904 89 HLT-DLKEE-----------------GKIKTVALTNF--DTERLRIILEN-GIP 121 (290)
Q Consensus 89 ~l~-~L~~~-----------------G~ir~iGvs~~--~~~~l~~~~~~-~~~ 121 (290)
+|- .+.+. +.|--||-.+. +.+.+..+++. ++.
T Consensus 178 al~~~l~~~~~~~~~~~~~~~~~~~~~~VNiiG~~~~~gd~~eik~lL~~~Gi~ 231 (483)
T 3pdi_A 178 AMLKYVIGTREPDPLPVGSERPGIRVHDVNLIGEYNIAGEFWHVLPLLDELGLR 231 (483)
T ss_dssp HTHHHHTTSSCCCCCCTTCCSSSCCCEEEEEESCCCBTTGGGGTHHHHHHHTEE
T ss_pred HHHHHHhhccCccccCcccccccCCCCeEEEEcCCCChhHHHHHHHHHHHCCCc
Confidence 332 33321 35666775543 34567777765 443
No 117
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=34.55 E-value=2.4e+02 Score=25.31 Aligned_cols=89 Identities=17% Similarity=0.107 Sum_probs=58.5
Q ss_pred EEEecCCCC----------CccHHHHHHHHHHHH-HcCC------ccEEEcc--CCCHHHHHHHHHc--CCCeeeeeccc
Q 022904 71 LQFHWWDYS----------NPGYLDALNHLTDLK-EEGK------IKTVALT--NFDTERLRIILEN--GIPVVSNQVQH 129 (290)
Q Consensus 71 ~~lH~p~~~----------~~~~~~~~~~l~~L~-~~G~------ir~iGvs--~~~~~~l~~~~~~--~~~~~~~q~~~ 129 (290)
+-||.++++ ...+++++++++++. +.|. |+++=+. |-+.+.+.++.+. +.+..++-++|
T Consensus 232 iSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpy 311 (404)
T 3rfa_A 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 (404)
T ss_dssp EECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEEC
T ss_pred ecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEec
Confidence 568887632 122678899996654 4565 4455444 4457777777766 56677788899
Q ss_pred cccccCh--------hhhHHHHHHHhCCeEEecccccc
Q 022904 130 SVVDMRP--------QQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 130 n~~~~~~--------~~~~~~~~~~~gi~via~spl~~ 159 (290)
|+..... -..+.+.++++|+.+..+.+.+.
T Consensus 312 nP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp CCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCc
Confidence 9864321 23467778889999998876643
No 118
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=34.32 E-value=2e+02 Score=24.97 Aligned_cols=84 Identities=10% Similarity=0.071 Sum_probs=53.0
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-... -++.+.+|+++-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+
T Consensus 209 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k~~~~GGit~~~~i~~~A~ 282 (354)
T 3jva_A 209 YQIELVEQPVKRR-----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKK-GTVDVINIKLMKCGGIHEALKINQICE 282 (354)
T ss_dssp SCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCChh-----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHc-CCCCEEEECchhcCCHHHHHHHHHHHH
Confidence 4566666654322 245566666654443 334455778888888763 346667766554311 12357899999
Q ss_pred HhCCeEEecccc
Q 022904 146 LTGVKLITYGTV 157 (290)
Q Consensus 146 ~~gi~via~spl 157 (290)
.+|+.++..+.+
T Consensus 283 ~~gi~~~~~~~~ 294 (354)
T 3jva_A 283 TAGIECMIGCMA 294 (354)
T ss_dssp HTTCEEEECCCT
T ss_pred HcCCeEEecCCC
Confidence 999999987776
No 119
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=34.20 E-value=74 Score=28.01 Aligned_cols=68 Identities=12% Similarity=0.027 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~s 155 (290)
++.+.++++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-.-. ..-..+...|+.+|+.++.-+
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (375)
T 1r0m_A 228 LVDHAELARRIRTPLCLDESVASASDARKALAL-GAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGG 297 (375)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhCCCCEEecCccCCHHHHHHHHHh-CCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecC
Confidence 44566666654443 334445688899988874 347777876654311 113578999999999965433
No 120
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=34.01 E-value=53 Score=27.91 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=36.5
Q ss_pred HHHHHHHHhhhCCCcccEEEEecCCCCC----ccHHHHHHHHHHHHH-cCCccEEE
Q 022904 53 RESIDVSRRRMDVPCLDMLQFHWWDYSN----PGYLDALNHLTDLKE-EGKIKTVA 103 (290)
Q Consensus 53 ~~~~~~SL~~Lg~d~iDl~~lH~p~~~~----~~~~~~~~~l~~L~~-~G~ir~iG 103 (290)
++++.+.|++||++.=|++++|..-... ..-..++++|.+++. +|-+---.
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt 72 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPT 72 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEec
Confidence 4667788899999999999999853221 123688888888876 66654433
No 121
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=33.79 E-value=91 Score=27.31 Aligned_cols=140 Identities=11% Similarity=-0.015 Sum_probs=75.8
Q ss_pred ccCCChhhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCC---------------------
Q 022904 8 TYGMGLLKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVP--------------------- 66 (290)
Q Consensus 8 ~Yg~G~sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d--------------------- 66 (290)
.++.|.+++.+.+..+.....+.+ .+--|++.. +.+.-.+.++..++.+|-+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~g~~---~~K~Kvg~~----~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~ 209 (370)
T 2chr_A 137 TLASGDTKRDLDSAVEMIERRRHN---RFKVKLGFR----SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIP 209 (370)
T ss_dssp EECSSCHHHHHHHHHHHHHTTSCC---EEEEECSSS----CHHHHHHHHHHHHHHTTTTSEEEEECTTCCCTHHHHHHHH
T ss_pred eeccCchhhhHHHHHHHHhhcccc---eeecccccC----ChHHHHHHHHHHHHhcCCCcEEEecCCCCCCHHHHHHHHH
Confidence 345567777777655555333321 344565532 3444445555555555532
Q ss_pred ---cccEEEEecCCCCCccHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHH
Q 022904 67 ---CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMA 141 (290)
Q Consensus 67 ---~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~ 141 (290)
-+++.++-.|-... -++.+.+|++...|. ..|=+-++...+..+++. ..++++|+...-+-. ..-..+.
T Consensus 210 ~l~~~~~~~iEeP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~-~a~d~i~~d~~~~GGit~~~~ia 283 (370)
T 2chr_A 210 ELEALGVELIEQPVGRE-----NTQALRRLSDNNRVAIMADESLSTLASAFDLARD-RSVDVFSLKLCNMGGVSATQKIA 283 (370)
T ss_dssp HHHTTTCCEEECCSCSS-----CHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTT-TCCSEECCCHHHHTSHHHHHHHH
T ss_pred HHHhcCCceecCCCChh-----hhhhhhHHhhhccCCccCCccCCCHHHHHHHHHc-CCCcEEEeCCcccCCHHHHHHHH
Confidence 12233333332211 234555566554442 345556777777777763 346666666543211 1135788
Q ss_pred HHHHHhCCeEEeccccccc
Q 022904 142 ELCQLTGVKLITYGTVMGG 160 (290)
Q Consensus 142 ~~~~~~gi~via~spl~~G 160 (290)
.+|+.+|+.++..+.+..+
T Consensus 284 ~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 284 AVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHTCEECCCCCSCCH
T ss_pred HHHHHcCCeEEeCCCcccH
Confidence 9999999999887766443
No 122
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=33.63 E-value=49 Score=27.18 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=35.1
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhh
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~ 255 (290)
..|-.+.|++|++.++.-..++.|+..+..+|.-.|+..+
T Consensus 77 D~TD~e~Al~~a~~~g~~~I~i~Ga~GGR~DH~lani~lL 116 (223)
T 3k94_A 77 DKTDMEIALDWAVEQTARCIRLFGATGGRLDHLFGNVELL 116 (223)
T ss_dssp TBCHHHHHHHHHHTTCCSEEEEESCSSSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 4578899999999998888889999999999999998765
No 123
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.30 E-value=3e+02 Score=25.59 Aligned_cols=139 Identities=14% Similarity=0.078 Sum_probs=76.8
Q ss_pred hhHHhhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCc-c---HHHHHHH
Q 022904 14 LKISMASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNP-G---YLDALNH 89 (290)
Q Consensus 14 sE~~lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~-~---~~~~~~~ 89 (290)
.|+-|-++|+++.++.+.+-++|.|=+-+.--+ +++..-+++.-++++ +.++.+|.|..... . .+.++++
T Consensus 118 g~~kL~~aI~~~~~~~~P~~I~V~tTC~~eiIG---dDi~~v~~~~~~~~~---~pVi~v~tpGf~g~s~~~G~~~a~~a 191 (533)
T 1mio_A 118 GVNKLKDAIHEAYEMFHPAAIGVYATCPVGLIG---DDILAVAATASKEIG---IPVHAFSCEGYKGVSQSAGHHIANNT 191 (533)
T ss_dssp THHHHHHHHHHHHHHTCCSEEEECCCHHHHHHT---CCHHHHHHHHHHHHS---SCEEECCCCTTSSSSTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHhc---CCHHHHHHHHHHhhC---CcEEEEeCCCCcCcchhHHHHHHHHH
Confidence 366777788888777666777777776431111 334444444444454 68999999866542 1 2344444
Q ss_pred HHH-HHH-------cCCccEEEccCCC--HHHHHHHHHc-CCCeeeeecc--------------cccccc-ChhhhHHHH
Q 022904 90 LTD-LKE-------EGKIKTVALTNFD--TERLRIILEN-GIPVVSNQVQ--------------HSVVDM-RPQQKMAEL 143 (290)
Q Consensus 90 l~~-L~~-------~G~ir~iGvs~~~--~~~l~~~~~~-~~~~~~~q~~--------------~n~~~~-~~~~~~~~~ 143 (290)
|-+ +.. .++|--||-.++. .+.+..+++. |+.+..+-.. +|+... .....+.++
T Consensus 192 l~~~~~~~~~~~~~~~~VNIlG~~~~~gD~~eikrlL~~~Gi~v~~~~~gg~t~~ei~~~~~A~~niv~~~~~~~~~A~~ 271 (533)
T 1mio_A 192 VMTDIIGKGNKEQKKYSINVLGEYNIGGDAWEMDRVLEKIGYHVNATLTGDATYEKVQNADKADLNLVQCHRSINYIAEM 271 (533)
T ss_dssp HHHHTTBCCCCCCCTTEEEEEEECCBTSHHHHHHHHHHHHTCEEEEEEETTCCHHHHHBTTSCSEEEESCHHHHHHHHHH
T ss_pred HHHHhcccccCCCCCCeEEEEcCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhhcCCEEEEECHHHHHHHHHH
Confidence 444 221 3457778876653 3667777775 5543322111 222211 112334555
Q ss_pred HH-HhCCeEEeccccc
Q 022904 144 CQ-LTGVKLITYGTVM 158 (290)
Q Consensus 144 ~~-~~gi~via~spl~ 158 (290)
++ +.|+.++...|++
T Consensus 272 Leer~GiP~i~~~piG 287 (533)
T 1mio_A 272 METKYGIPWIKCNFIG 287 (533)
T ss_dssp HHHHHCCCEEECCCSS
T ss_pred HHHHhCCCeEEecCCC
Confidence 54 5599999877663
No 124
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=33.17 E-value=2.7e+02 Score=25.11 Aligned_cols=95 Identities=11% Similarity=0.046 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccC--CCHHHHHHHHHcCCCeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~~ 125 (290)
+++...+.+.+.++.+ ++++|-.|-...+ |+.+.+|.+..+|--.|=-. .+++.+..+++. -..+++
T Consensus 274 t~~eai~~~~~~l~~y-----~i~~iEdPl~~dD-----~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~-~a~d~i 342 (436)
T 2al1_A 274 TGPQLADLYHSLMKRY-----PIVSIEDPFAEDD-----WEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEK-KAADAL 342 (436)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----HHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHT-TCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CcEEEECCCCCcC-----HHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHh-CCCCEE
Confidence 6666666667667664 6889998855433 56677777777775555444 368999999984 347777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEe
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via 153 (290)
|+..|-.-. ....++...|+.+|+.++.
T Consensus 343 ~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 343 LLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 776653211 1135789999999998755
No 125
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=33.05 E-value=2.6e+02 Score=24.81 Aligned_cols=149 Identities=13% Similarity=0.110 Sum_probs=84.1
Q ss_pred HHHhhhCCCcccEEEEecC-------CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCeeeeecccc
Q 022904 58 VSRRRMDVPCLDMLQFHWW-------DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHS 130 (290)
Q Consensus 58 ~SL~~Lg~d~iDl~~lH~p-------~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n 130 (290)
++|+.||.+|=|+-.+|.. |.... ..++ ..|-.. .--.+=.|+.+.+.+..+++.+..+.-+..-+|
T Consensus 73 ~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~-~~ei----a~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HN 146 (372)
T 2p0o_A 73 EALKRAGFSFDELEPLIELGVTGLRMDYGIT-IEQM----AHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHN 146 (372)
T ss_dssp HHHHTTTCBTTBCHHHHHHTCCEEEECSSCC-HHHH----HHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCC-HHHH----HHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeec
Confidence 4566677776666666643 33333 2222 222223 333566778889999999987544443333344
Q ss_pred ccccCh----h----hhHHHHHHHhCCeEEeccccccccccccccCCCCCCCCCCCCCCCcchhHhhhhhhccCCchhHH
Q 022904 131 VVDMRP----Q----QKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQ 202 (290)
Q Consensus 131 ~~~~~~----~----~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (290)
.- +.+ . .+.=++.++.|+.+.|+-|=..+ +.|.... ..++++..
T Consensus 147 FY-Pr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~-~rGPl~e------------GLPTLE~H-------------- 198 (372)
T 2p0o_A 147 YY-PRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ-TRGPIFA------------GLPTLEKH-------------- 198 (372)
T ss_dssp CC-CSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSS-CCTTTCS------------CCCSBGGG--------------
T ss_pred cC-CCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCc-cCCCccC------------CCCchHHh--------------
Confidence 31 122 1 23346677889999998766432 2222111 11222222
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHh
Q 022904 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNA 253 (290)
Q Consensus 203 ~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~ 253 (290)
.++++ .++...+...+.|.-|++|=...+.+.+++...
T Consensus 199 ------------R~~~~-~~~a~~L~~~~~iD~V~IGd~~~S~~el~~l~~ 236 (372)
T 2p0o_A 199 ------------RGQNP-FAAAVGLMADPYVDAVYIGDPTISERTMAQFGY 236 (372)
T ss_dssp ------------TTSCH-HHHHHHHHHSTTCCEEEECSSCCCHHHHHHHHH
T ss_pred ------------CCCCH-HHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHH
Confidence 23444 445666778888999999987667777776655
No 126
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=32.14 E-value=1.1e+02 Score=27.51 Aligned_cols=67 Identities=10% Similarity=0.075 Sum_probs=41.6
Q ss_pred HHHHHHHHHc-CCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEec
Q 022904 87 LNHLTDLKEE-GKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 154 (290)
Q Consensus 87 ~~~l~~L~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~ 154 (290)
++.+.++++. +.| -..|=+-++++.+..+++. ...+++|+..+-.-. ..-..+...|+++|+.++.+
T Consensus 282 ~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 282 VLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQA-GAVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHH-TCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 4455566654 222 3445556678888888774 346777776654211 11346889999999998654
No 127
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=32.09 E-value=45 Score=25.58 Aligned_cols=50 Identities=8% Similarity=0.109 Sum_probs=30.9
Q ss_pred HHHHHHhhhCCCc--ccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEcc
Q 022904 55 SIDVSRRRMDVPC--LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT 105 (290)
Q Consensus 55 ~~~~SL~~Lg~d~--iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs 105 (290)
.+.+.|+.+.-.. +|.+++...|.-.....+....++.|.+.| |+.+-++
T Consensus 61 ~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g-v~l~~~~ 112 (167)
T 3guv_A 61 QFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYG-VNLICVE 112 (167)
T ss_dssp HHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTT-CEEEETT
T ss_pred HHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCC-CEEEEee
Confidence 3444444444334 788888887777666677777777777765 4444333
No 128
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=31.94 E-value=44 Score=27.40 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=34.6
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhh
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~ 255 (290)
..|-.++|++|++.++.-..+++|+..+..+|.-.|+..+
T Consensus 78 D~TD~e~Al~~a~~~g~~~I~i~Ga~GgR~DH~lani~ll 117 (222)
T 3lm8_A 78 DQTDLDLALDWALEKQPDIIQIFGITGGRADHFLGNIQLL 117 (222)
T ss_dssp SSCHHHHHHHHHHHHCCSEEEEESCCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 4578899999999988888889999999999988888654
No 129
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=31.58 E-value=1.8e+02 Score=25.66 Aligned_cols=101 Identities=8% Similarity=-0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeeccccc
Q 022904 53 RESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSV 131 (290)
Q Consensus 53 ~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~ 131 (290)
.....+-++.| +.+++.++-.|-...+ ++.+.+|++. +.--..|=+-++...+..+++ ...++++|+..+-
T Consensus 206 ~~~A~~~~~~l--~~~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~-~~a~d~v~~k~~~ 277 (381)
T 3fcp_A 206 AATGAKGCREL--AAMGVDLIEQPVSAHD-----NAALVRLSQQIETAILADEAVATAYDGYQLAQ-QGFTGAYALKIAK 277 (381)
T ss_dssp HHHHHHHHHHH--HHTTCSEEECCBCTTC-----HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHH-TTCCSEEEECHHH
T ss_pred HHHHHHHHHHH--hhcCccceeCCCCccc-----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHH-cCCCCEEEecccc
Q ss_pred c-ccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 132 V-DMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 132 ~-~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
+ --..-..+...|+.+|+.++..+.+..|+
T Consensus 278 ~GGit~~~~ia~~A~~~gi~~~~~~~~es~i 308 (381)
T 3fcp_A 278 AGGPNSVLALARVAQAAGIGLYGGTMLEGTV 308 (381)
T ss_dssp HTSTTHHHHHHHHHHHHTCEEEECCSCCCHH
T ss_pred cCCHHHHHHHHHHHHHcCCceecCCCCccHH
No 130
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=31.15 E-value=75 Score=25.93 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=72.2
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEE-EecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCC--
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ-FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD-- 108 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~-lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~-- 108 (290)
.++.++-.+++. ......+...+.+.+++.+.+.-.+.+ +........ ...+...+..|++.|-- |++.+|+
T Consensus 93 ~~~~l~iNls~~--~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~-~~~~~~~l~~L~~~G~~--ialDdfG~g 167 (250)
T 4f3h_A 93 HKTHLLVRIGPN--SFSDPQMIDTIREQLAVYGVPGERLWLQTPESKVFTH-LRNAQQFLASVSAMGCK--VGLEQFGSG 167 (250)
T ss_dssp CCCEEEEECCGG--GSSCHHHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHS-HHHHHHHHHHHHTTTCE--EEEEEETSS
T ss_pred CCceEEEEeCHH--HhCCcHHHHHHHHHHHHcCCCcceEEEEEechhhhcC-HHHHHHHHHHHHHCCCE--EEEeCCCCC
Confidence 345666666553 234467788899999988876333322 221111111 35788899999999974 5555543
Q ss_pred HHHHHHHHHcCCCeeeeecccccccc---C-----hhhhHHHHHHHhCCeEEecc
Q 022904 109 TERLRIILENGIPVVSNQVQHSVVDM---R-----PQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 109 ~~~l~~~~~~~~~~~~~q~~~n~~~~---~-----~~~~~~~~~~~~gi~via~s 155 (290)
...+..+. ..+++++-+.-+.+.. . .-+.++..|+..|+.+++=+
T Consensus 168 ~s~l~~L~--~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG 220 (250)
T 4f3h_A 168 LDSFQLLA--HFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF 220 (250)
T ss_dssp THHHHHHT--TSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC
T ss_pred chHHHHHh--hCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec
Confidence 45566555 4567776666444322 1 13467899999999999843
No 131
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.14 E-value=1.1e+02 Score=24.63 Aligned_cols=74 Identities=8% Similarity=-0.030 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHHHcCCCeeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 126 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~q 126 (290)
+.++++.. ..+|.||+=+.+. -+.+.... .+....|.... ...+..+||. |-+++.+.++.+ ...++++|
T Consensus 10 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~-~~~ld~vQ 80 (203)
T 1v5x_A 10 RLEDALLA-----EALGAFALGFVLA-PGSRRRIA-PEAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLME-EARLQVAQ 80 (203)
T ss_dssp CHHHHHHH-----HHHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHH-HTTCSEEE
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHH-hhCCCEEE
Confidence 45555543 4789999888853 22333322 24333333222 2458899987 568888888887 56799999
Q ss_pred cccc
Q 022904 127 VQHS 130 (290)
Q Consensus 127 ~~~n 130 (290)
++-+
T Consensus 81 LHG~ 84 (203)
T 1v5x_A 81 LHGE 84 (203)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9743
No 132
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=30.85 E-value=87 Score=27.65 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.++++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+++|+.++..+.+..
T Consensus 231 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 304 (377)
T 3my9_A 231 LDAMAGFAAALDTPILADESCFDAVDLMEVVRR-QAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEG 304 (377)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHH-TCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCS
T ss_pred HHHHHHHHHhCCCCEEECCccCCHHHHHHHHHc-CCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCc
Confidence 44555566543332 334455677777777763 246666665543211 1135688999999999987654433
No 133
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=30.51 E-value=2.7e+02 Score=24.11 Aligned_cols=87 Identities=9% Similarity=0.043 Sum_probs=54.3
Q ss_pred HHHhhhCCCcccEEEEecC---------CCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeec
Q 022904 58 VSRRRMDVPCLDMLQFHWW---------DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQV 127 (290)
Q Consensus 58 ~SL~~Lg~d~iDl~~lH~p---------~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~ 127 (290)
+.+.+||+.++=|- |+- +........-.+.++++-+.|.+ |-+|..+...+..+++. ..|+.+-..
T Consensus 106 ~~~y~lGvR~~~Lt--~n~~N~~~~g~~~~~~GLT~~G~~vV~emnrlGmi--vDlSH~s~~~~~dvl~~s~~Pvi~SHs 181 (325)
T 2i5g_A 106 EVFKQLGVGIVQMC--YNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGIM--CDLSHVGSKTSEEVILESKKPVCYSHC 181 (325)
T ss_dssp HHHHHTTEEEEESC--CSSBCSSCBBTTSCCCCCCHHHHHHHHHHHHHTCE--EECTTBCHHHHHHHHHHCSSCCEEEEE
T ss_pred HHHHHcCCeEEEee--ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcE--EEcCcCCHHHHHHHHHHhCCCEEEeCC
Confidence 55667887655443 321 11112235667778888888997 77887788888888887 556555554
Q ss_pred cccccc---cChhhhHHHHHHHhC
Q 022904 128 QHSVVD---MRPQQKMAELCQLTG 148 (290)
Q Consensus 128 ~~n~~~---~~~~~~~~~~~~~~g 148 (290)
....+. |+...+.+..+.++|
T Consensus 182 n~~al~~h~RNl~De~irala~~G 205 (325)
T 2i5g_A 182 LPSGLKEHPRNKSDEELKFIADHG 205 (325)
T ss_dssp CBTTTCCCTTSBCHHHHHHHHHTT
T ss_pred CccccCCCCCCCCHHHHHHHHHcC
Confidence 443332 233456778888877
No 134
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=30.48 E-value=71 Score=27.15 Aligned_cols=48 Identities=23% Similarity=0.210 Sum_probs=34.3
Q ss_pred HHHHHHHHhhhCCCcccEEEEecCCCC----CccHHHHHHHHHHHHH-cCCcc
Q 022904 53 RESIDVSRRRMDVPCLDMLQFHWWDYS----NPGYLDALNHLTDLKE-EGKIK 100 (290)
Q Consensus 53 ~~~~~~SL~~Lg~d~iDl~~lH~p~~~----~~~~~~~~~~l~~L~~-~G~ir 100 (290)
++++.+.|+.||+..=|.+++|..-.. ...-..++++|.+++. +|-+-
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLv 67 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIV 67 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 456777889999999999999985211 1114678888888775 66543
No 135
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=30.27 E-value=1.3e+02 Score=25.72 Aligned_cols=19 Identities=11% Similarity=0.246 Sum_probs=16.6
Q ss_pred hhhHHHHHHHhCCeEEecc
Q 022904 137 QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 137 ~~~~~~~~~~~gi~via~s 155 (290)
..++++.|+++|+.|.+|.
T Consensus 257 ~~~~v~~~~~~Gl~V~~WT 275 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWT 275 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBC
T ss_pred CHHHHHHHHHCCCEEEEEc
Confidence 3578999999999999996
No 136
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=29.86 E-value=42 Score=29.25 Aligned_cols=69 Identities=12% Similarity=0.076 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcCC
Q 022904 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 206 ~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~--------~~--Lt~e~~~~l~~~~~~~~ 275 (290)
+..+++++++|+...---+.=++..+.+..|++.+. +..|.+-.++|++ +| ++.+|.++|.++.++..
T Consensus 68 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 145 (393)
T 4fb5_A 68 GLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSG 145 (393)
T ss_dssp TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcC
Confidence 456778888887432222444567788999999888 8888777766653 34 66788888888776543
Q ss_pred C
Q 022904 276 D 276 (290)
Q Consensus 276 ~ 276 (290)
.
T Consensus 146 ~ 146 (393)
T 4fb5_A 146 K 146 (393)
T ss_dssp S
T ss_pred C
Confidence 3
No 137
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=29.49 E-value=2e+02 Score=25.73 Aligned_cols=91 Identities=15% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCC-CCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeecccccc
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDY-SNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV 132 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~-~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~ 132 (290)
.+-+.|+.+++++|. .+ ..+ +.+..+.++++. +.--..|=+-++.+.+..+++ ....+++|+..+-+
T Consensus 231 ~~~~~L~~~~i~~iE-------qP~~~~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~-~~~~d~v~~k~~~~ 299 (410)
T 3dip_A 231 RICNALADYGVLWVE-------DPIAKM---DNIPAVADLRRQTRAPICGGENLAGTRRFHEMLC-ADAIDFVMLDLTWC 299 (410)
T ss_dssp HHHHHGGGGTCSEEE-------CCBSCT---TCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHH-TTCCSEEEECTTTS
T ss_pred HHHHHHHhcCCCEEE-------CCCCCc---ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHH-cCCCCeEeeccccc
Q ss_pred -ccChhhhHHHHHHHhCCeEEeccc
Q 022904 133 -DMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 133 -~~~~~~~~~~~~~~~gi~via~sp 156 (290)
--..-..+...|+.+|+.++.++.
T Consensus 300 GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 300 GGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred CCHHHHHHHHHHHHHcCCEEeeeCc
No 138
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=29.33 E-value=76 Score=22.58 Aligned_cols=28 Identities=25% Similarity=0.420 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHhC
Q 022904 203 VLLQTLKRIASKHGVSIPVVAVRYILDQ 230 (290)
Q Consensus 203 ~~~~~l~~la~~~g~s~~~~al~~~l~~ 230 (290)
++++.|+++|++-|+|+++++=+.++..
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~Ey 35 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILKEY 35 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4568999999999999999987777653
No 139
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=29.24 E-value=2.5e+02 Score=23.40 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc--CCCeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~ 125 (290)
+.+.+.+..++.. .-|.|.||+=. .+.. .+ ..+-+..+....++--=--|.|.++.++.++++++. +.++.
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~~~-v~-~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iI-- 95 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GPAV-QD-KVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMI-- 95 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----C-HHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEE--
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CCCC-CC-hHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEE--
Confidence 4566666666655 57999999976 2111 12 233333333333331112588889999999999986 43222
Q ss_pred eccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 126 QVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 126 q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
+..|.. ..+-.++++.+++.|++++.+..
T Consensus 96 -Ndvs~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 96 -NSTNAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp -EEECSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred -EECCCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 222322 11112799999999999999753
No 140
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=29.19 E-value=1.1e+02 Score=27.23 Aligned_cols=72 Identities=7% Similarity=-0.001 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.+|++.-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+.+..
T Consensus 232 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 232 FELMARLRGLTDVPLLADESVYGPEDMVRAAHE-GICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCcc
Confidence 44555566543332 344455677777777763 235666665543211 1135689999999999987655444
No 141
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=29.03 E-value=64 Score=27.87 Aligned_cols=73 Identities=18% Similarity=0.312 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCC-ccEEEccCC------CHHHHHHHHHc----CCCeeeeeccccccccCh--hhhHHHHHHHhC-
Q 022904 83 YLDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDMRP--QQKMAELCQLTG- 148 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~--~~~~~~~~~~~g- 148 (290)
....++.++.|+++|. |..||+-.| .++.+...++. +.++.+..+.... ... -..+++.|.++.
T Consensus 182 ~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~G~pv~iTEldi~~--~qa~~y~~~~~~~~~~~~ 259 (313)
T 1v0l_A 182 TQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQG--APASTYANVTNDCLAVSR 259 (313)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTTCEEEEEEEEETT--CCHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhcCCeEEEEeCCccH--HHHHHHHHHHHHHHhcCC
Confidence 3466788888999996 889998644 13444444443 5555555555442 222 246888898875
Q ss_pred -CeEEecccc
Q 022904 149 -VKLITYGTV 157 (290)
Q Consensus 149 -i~via~spl 157 (290)
++|+-|..-
T Consensus 260 v~git~Wg~~ 269 (313)
T 1v0l_A 260 CLGITVWGVR 269 (313)
T ss_dssp EEEEEESCSB
T ss_pred ceEEEEECCC
Confidence 666666644
No 142
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=28.81 E-value=92 Score=27.27 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecc
Q 022904 87 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 87 ~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~s 155 (290)
++.+.+|+++-.|- ..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+++|+.++.-+
T Consensus 221 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 290 (369)
T 2zc8_A 221 LLDHAKLQRELSTPICLDESLTGAEKARKAIEL-GAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGG 290 (369)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHh-CCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecC
Confidence 44566666654443 334455788888888874 346777776554211 113578999999999965433
No 143
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=28.68 E-value=91 Score=27.70 Aligned_cols=78 Identities=12% Similarity=-0.084 Sum_probs=49.0
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHc-----CCccEE-EccCCCHHHHHHHHHcCCCeeeeeccccccccCh-hhhH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKIKTV-ALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP-QQKM 140 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-----G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~-~~~~ 140 (290)
.++.++..|-. .. ++.+.++++. -.|--. |= -++++.+..+++ ....+++|+..+-+ .-. -..+
T Consensus 227 ~~i~~iE~P~~-~d-----~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~-~~~~d~v~ik~~~~-Git~~~~i 297 (392)
T 3p3b_A 227 VNLYWLEEAFH-ED-----EALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWAT-RGRVDVLQYDIIWP-GFTHWMEL 297 (392)
T ss_dssp SCEEEEECSSS-CC-----HHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHH-TTSCCEECCBTTTB-CHHHHHHH
T ss_pred cCCCEEecCCc-cc-----HHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHH-cCCCCEEEeCcccc-CHHHHHHH
Confidence 35556676654 22 3345555554 333322 33 456778888887 34577888877664 222 3578
Q ss_pred HHHHHHhCCeEEec
Q 022904 141 AELCQLTGVKLITY 154 (290)
Q Consensus 141 ~~~~~~~gi~via~ 154 (290)
...|+++|+.++..
T Consensus 298 ~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 298 GEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHHHHTTCEECCB
T ss_pred HHHHHHcCCEEEec
Confidence 99999999999986
No 144
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=28.58 E-value=1.8e+02 Score=25.65 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=43.5
Q ss_pred HHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 88 NHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 88 ~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
+.+.+|++.-.|. ..|=+-++.+.+..+++. ..++++|+..+-+-. ..-..+...|+.+|+.++..+.+..
T Consensus 233 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 233 AETKSLRARCALPLLLDELIQTETDLIAAIRD-DLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp HHHHHHHTTCCSCEEESTTCCSHHHHHHHHHT-TCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred HHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh-CCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 3455555543332 345555677777777763 346666666554211 1135689999999999997655543
No 145
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=28.46 E-value=1.1e+02 Score=21.65 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=28.5
Q ss_pred CcchhHhhhhhhccCCchhHHHHHHHHHHHHHHcCCChHHHHHHHH
Q 022904 182 TPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYI 227 (290)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~s~~~~al~~~ 227 (290)
..+.+.++.--..++-.+.. ++++.+.++|..|++++.+++-.|.
T Consensus 25 ~Vsae~L~eEfdefGi~~~d-~VldKc~ELC~~y~lda~e~VeeWm 69 (101)
T 2keb_A 25 SASAQQLAEELQIFGLDCEE-ALIEKLVELCVQYGQNEEGMVGELI 69 (101)
T ss_dssp CCCHHHHHHHHHHHTCBCCH-HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHcCCCCCH-HHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34445555433333332222 5678999999999998887776664
No 146
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.45 E-value=1.8e+02 Score=23.38 Aligned_cols=91 Identities=9% Similarity=-0.000 Sum_probs=49.3
Q ss_pred HHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccC---CCHHHHHHHHHc----CCCeeeeecccc
Q 022904 58 VSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN---FDTERLRIILEN----GIPVVSNQVQHS 130 (290)
Q Consensus 58 ~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~---~~~~~l~~~~~~----~~~~~~~q~~~n 130 (290)
+.++++|.+.|.+...|.+.. .. -.++-+.-+.+.+.|. +..+++. -..+.+...++. +.+..++.
T Consensus 37 ~~~~~~G~~~vEl~~~~~~~~-~~-~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~---- 109 (257)
T 3lmz_A 37 KTLERLDIHYLCIKDFHLPLN-ST-DEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV---- 109 (257)
T ss_dssp HHHHHTTCCEEEECTTTSCTT-CC-HHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE----
T ss_pred HHHHHhCCCEEEEecccCCCC-CC-HHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec----
Confidence 346788999999887664322 22 2233333444455565 4444332 245555555554 55544432
Q ss_pred ccccChhhhHHHHHHHhCCeEEecccc
Q 022904 131 VVDMRPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~gi~via~spl 157 (290)
+-. ..-+.+.+.|+++||.+ ++.+.
T Consensus 110 p~~-~~l~~l~~~a~~~gv~l-~lEn~ 134 (257)
T 3lmz_A 110 PNY-ELLPYVDKKVKEYDFHY-AIHLH 134 (257)
T ss_dssp ECG-GGHHHHHHHHHHHTCEE-EEECC
T ss_pred CCH-HHHHHHHHHHHHcCCEE-EEecC
Confidence 211 22356888899999864 44555
No 147
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=28.31 E-value=66 Score=27.58 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhCCCcccEEEEecCCCCCc----cHHHHHHHHHHHHH-cCCccEEEcc
Q 022904 52 VRESIDVSRRRMDVPCLDMLQFHWWDYSNP----GYLDALNHLTDLKE-EGKIKTVALT 105 (290)
Q Consensus 52 i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~----~~~~~~~~l~~L~~-~G~ir~iGvs 105 (290)
-++++.+.|+.||+..=|.+++|..-.... .-..++++|.+++. +|-+---.+|
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 356778889999999999999998633322 13678888888774 6766544433
No 148
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.30 E-value=2.5e+02 Score=23.50 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.6
Q ss_pred hhHHHHHHHhCCeEEec
Q 022904 138 QKMAELCQLTGVKLITY 154 (290)
Q Consensus 138 ~~~~~~~~~~gi~via~ 154 (290)
+..+++|++.|+..+..
T Consensus 117 ~~~i~~A~~lG~~~v~~ 133 (305)
T 3obe_A 117 KKATDIHAELGVSCMVQ 133 (305)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 46899999999999884
No 149
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=28.15 E-value=2.9e+02 Score=24.53 Aligned_cols=82 Identities=11% Similarity=0.029 Sum_probs=50.8
Q ss_pred EEecCCCCCccHHHHHHHHHHHHHc-----CCc-cEEEccCCCHHHHHHHHHcCCCeeeeeccccccccC-hhhhHHHHH
Q 022904 72 QFHWWDYSNPGYLDALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-PQQKMAELC 144 (290)
Q Consensus 72 ~lH~p~~~~~~~~~~~~~l~~L~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~ 144 (290)
++-.|-.... ..+-++.+.+|.+. ..| -..|=+.++.+.+..+++. ...+++|+..+-+-.- .-..+..+|
T Consensus 271 ~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~~GGit~a~~i~~~A 348 (413)
T 1kcz_A 271 RIEGPMDVED-RQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDN-KAGHMVQIKTPDLGGVNNIADAIMYC 348 (413)
T ss_dssp EEECSBCCSS-HHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHT-TCSSEEEECTGGGSSTHHHHHHHHHH
T ss_pred EEecCCCCCC-CcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHh-CCCCEEEeCccccCCHHHHHHHHHHH
Confidence 5666543221 13456666666665 222 2345556678888888773 3477777776653221 235789999
Q ss_pred HHhCCeEEecc
Q 022904 145 QLTGVKLITYG 155 (290)
Q Consensus 145 ~~~gi~via~s 155 (290)
+++|+.++..+
T Consensus 349 ~~~gi~~~~~~ 359 (413)
T 1kcz_A 349 KANGMGAYCGG 359 (413)
T ss_dssp HHTTCEEEECC
T ss_pred HHcCCEEEecC
Confidence 99999999865
No 150
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=28.01 E-value=2e+02 Score=26.25 Aligned_cols=103 Identities=15% Similarity=0.079 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCCc----cHHHHHHHHHHHHHc-CC---ccEEEccCCCHHHHHHHHH
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNP----GYLDALNHLTDLKEE-GK---IKTVALTNFDTERLRIILE 117 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~----~~~~~~~~l~~L~~~-G~---ir~iGvs~~~~~~l~~~~~ 117 (290)
++.+.+.+..++.+ .=|.|.||+=--- .|..... .+..+...++.++++ .. =--|.|.++.++.++++++
T Consensus 209 ~~~~~al~~A~~mv-~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~ 287 (442)
T 3mcm_A 209 FDDNQRKLNLDELI-QSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILA 287 (442)
T ss_dssp SCCCHHHHHHHHHH-HHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHh
Confidence 45566666665544 4599999986321 2322111 134455567777762 11 1258999999999999998
Q ss_pred --cCCCeeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 118 --NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 118 --~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
.|.++.+|=+ |. ..+.++++.+++.|++++.+.
T Consensus 288 ~~aGa~i~INDV--sg---~~d~~m~~v~a~~g~~vVlMh 322 (442)
T 3mcm_A 288 KHHDIIWMINDV--EC---NNIEQKAQLIAKYNKKYVIIH 322 (442)
T ss_dssp HHGGGCCEEEEC--CC---TTHHHHHHHHHHHTCEEEEEC
T ss_pred hCCCCCEEEEcC--CC---CCChHHHHHHHHhCCeEEEEC
Confidence 5644422222 22 124579999999999999853
No 151
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=27.71 E-value=3.5e+02 Score=24.63 Aligned_cols=100 Identities=11% Similarity=0.110 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHh----hhCCC-cccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc--CC
Q 022904 48 TSSIVRESIDVSRR----RMDVP-CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GI 120 (290)
Q Consensus 48 ~~~~i~~~~~~SL~----~Lg~d-~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--~~ 120 (290)
+.+.+...++.--+ +.|-. .+|++.|+.-..+. +.....++.+++. -=.-+-+.+.+++.++++++. +.
T Consensus 103 ~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dp---e~~~~vVk~V~e~-~dvPL~IDS~dpevleaALea~a~~ 178 (446)
T 4djd_C 103 SSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDP---AAFKAAVASVAAA-TQLNLVLMADDPDVLKEALAGVADR 178 (446)
T ss_dssp CHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSST---HHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHGGGGGG
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCH---HHHHHHHHHHHHh-CCCCEEEecCCHHHHHHHHHhhcCc
Confidence 44556555554421 22311 68999999864433 3455555555543 223678888999999999986 23
Q ss_pred CeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 121 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
.+.++-.. ...-+.+.+.++++|..++++++
T Consensus 179 ~plI~sat-----~dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 179 KPLLYAAT-----GANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp CCEEEEEC-----TTTHHHHHHHHHHTTCCEEEECS
T ss_pred CCeeEecc-----hhhHHHHHHHHHHcCCcEEEEec
Confidence 34433222 22224799999999999999875
No 152
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=27.70 E-value=2.6e+02 Score=24.34 Aligned_cols=88 Identities=9% Similarity=-0.037 Sum_probs=0.0
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccc-cChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~ 145 (290)
.++.++..|-.... ++.+.++++. +.--..|=+-++.+.+..+++ ....+++|+..+-+- -..-..+...|+
T Consensus 214 ~~i~~iEqP~~~~~-----~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~-~~~~d~v~~k~~~~GGit~~~~i~~~A~ 287 (370)
T 1chr_A 214 LGVELIEQPVGREN-----TQALRRLSDNNRVAIMADESLSTLASAFDLAR-DRSVDVFSLKLCNMGGVSATQKIAAVAE 287 (370)
T ss_dssp TTEEEEECCSCTTC-----HHHHHHHHHHSCSEEEESSSCCSHHHHHHHHT-TTSCSEEEECTTTSCSHHHHHHHHHHHH
T ss_pred cCCCEEECCCCccc-----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHH-cCCCCEEEECccccCCHHHHHHHHHHHH
Q ss_pred HhCCeEEecccccccc
Q 022904 146 LTGVKLITYGTVMGGL 161 (290)
Q Consensus 146 ~~gi~via~spl~~G~ 161 (290)
.+|+.++..+.+..++
T Consensus 288 ~~g~~~~~~~~~es~i 303 (370)
T 1chr_A 288 ASGIASYGGTMLDSTI 303 (370)
T ss_dssp HHTCEEEECCSCCTTH
T ss_pred HcCCeEEecCCCccHH
No 153
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=27.69 E-value=2.3e+02 Score=22.82 Aligned_cols=64 Identities=9% Similarity=-0.098 Sum_probs=34.3
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEc
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL 104 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGv 104 (290)
+.|-+...-. +.+.+.+. .+.+.+.+++.|+. +..+|.+.. .. .+...+.++...+-|- +++.+
T Consensus 45 ~~vEl~~~~~--~~~~~~~~-~~~~~~~l~~~gl~---i~~~~~~~~-~~-~~~~~~~i~~A~~lGa-~~v~~ 108 (257)
T 3lmz_A 45 HYLCIKDFHL--PLNSTDEQ-IRAFHDKCAAHKVT---GYAVGPIYM-KS-EEEIDRAFDYAKRVGV-KLIVG 108 (257)
T ss_dssp CEEEECTTTS--CTTCCHHH-HHHHHHHHHHTTCE---EEEEEEEEE-CS-HHHHHHHHHHHHHHTC-SEEEE
T ss_pred CEEEEecccC--CCCCCHHH-HHHHHHHHHHcCCe---EEEEecccc-CC-HHHHHHHHHHHHHhCC-CEEEe
Confidence 4455554311 12334444 45678888888864 445554322 22 4566667777777663 34433
No 154
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=27.62 E-value=1.1e+02 Score=20.58 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=37.8
Q ss_pred HHHHHHcCCccEEEccCCCHHHHHHHHHc-CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 90 LTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 90 l~~L~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
++.+++.|++.. +..+...+++. ...+.++--..++ ..-..+..+|.++||+++-+.
T Consensus 3 ~~~~~kagk~~~------G~~~v~kai~~gkaklViiA~D~~~---~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII------GTKQTVKALKRGSVKEVVVAKDADP---ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE------SHHHHHHHHTTTCEEEEEEETTSCH---HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE------cHHHHHHHHHcCCeeEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEC
Confidence 677888998744 45666777764 2345544444444 223468889999999998754
No 155
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=27.57 E-value=1.2e+02 Score=25.70 Aligned_cols=66 Identities=11% Similarity=0.012 Sum_probs=39.8
Q ss_pred HHHHHHcCCccEEEccCCCHHHHHHHHHc--CCCeeeeec-------------c-------ccccccChhhhHHHHHHHh
Q 022904 90 LTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQV-------------Q-------HSVVDMRPQQKMAELCQLT 147 (290)
Q Consensus 90 l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~q~-------------~-------~n~~~~~~~~~~~~~~~~~ 147 (290)
++.+++.|....+=+++|+.+.+..+.+. .++..+... + +++-......++++.|+++
T Consensus 148 ~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~ 227 (292)
T 3mz2_A 148 AQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHER 227 (292)
T ss_dssp HHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHC
Confidence 33445556666777778888887777665 233222110 0 1110111245799999999
Q ss_pred CCeEEecc
Q 022904 148 GVKLITYG 155 (290)
Q Consensus 148 gi~via~s 155 (290)
|+.|.+|.
T Consensus 228 G~~V~vWT 235 (292)
T 3mz2_A 228 GVMCMIST 235 (292)
T ss_dssp TBCEEEEC
T ss_pred CCEEEEEe
Confidence 99999985
No 156
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=27.52 E-value=2.7e+02 Score=26.11 Aligned_cols=95 Identities=15% Similarity=0.087 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEecCCCC-CccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc--CCCeeee
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 125 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~-~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~~ 125 (290)
.+.+.+..++.. .-|.|.||+= |... .+..++.-+.+..+++.-. --|.|.++.++.++++++. +-++ +|
T Consensus 339 ~~~a~~~A~~~v-~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~-vpisIDT~~~~v~eaal~~~~G~~i-IN 411 (566)
T 1q7z_A 339 EEIVIKEAKTQV-EKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSN-VPLSLDIQNVDLTERALRAYPGRSL-FN 411 (566)
T ss_dssp CHHHHHHHHHHH-HTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTC-SCEEEECCCHHHHHHHHHHCSSCCE-EE
T ss_pred HHHHHHHHHHHH-HCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCC-ceEEEeCCCHHHHHHHHHhcCCCCE-EE
Confidence 455555554444 5799999998 4322 1112344444444444311 2478889999999999997 4333 22
Q ss_pred eccccccccChh--hhHHHHHHHhCCeEEecc
Q 022904 126 QVQHSVVDMRPQ--QKMAELCQLTGVKLITYG 155 (290)
Q Consensus 126 q~~~n~~~~~~~--~~~~~~~~~~gi~via~s 155 (290)
..|..+ + .++++.+++.|.+++.+.
T Consensus 412 --dis~~~---~~~~~~~~~~~~~g~~vV~m~ 438 (566)
T 1q7z_A 412 --SAKVDE---EELEMKINLLKKYGGTLIVLL 438 (566)
T ss_dssp --EEESCH---HHHHHHHHHHHHHCCEEEEES
T ss_pred --ECCcch---hhHHHHHHHHHHhCCeEEEEe
Confidence 222221 3 578999999999999975
No 157
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=26.71 E-value=2.5e+02 Score=22.58 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=50.9
Q ss_pred EEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc--CCCeee--eecccc-ccccChhhhHHHHH
Q 022904 70 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVS--NQVQHS-VVDMRPQQKMAELC 144 (290)
Q Consensus 70 l~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~--~q~~~n-~~~~~~~~~~~~~~ 144 (290)
++++-.|.... .+++++...+--++.-|++|=|.+.+.+....+.+. ++.+.+ .+..|. +-....+.+..+..
T Consensus 17 ~~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L 94 (201)
T 1vp8_A 17 IVYFNKPGREN--TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL 94 (201)
T ss_dssp CEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 34444443332 356665554444454599999888877766666664 333333 233332 22223356899999
Q ss_pred HHhCCeEEecccc
Q 022904 145 QLTGVKLITYGTV 157 (290)
Q Consensus 145 ~~~gi~via~spl 157 (290)
.+.|+.|+.-+=+
T Consensus 95 ~~~G~~V~t~tH~ 107 (201)
T 1vp8_A 95 RKRGAKIVRQSHI 107 (201)
T ss_dssp HHTTCEEEECCCT
T ss_pred HhCCCEEEEEecc
Confidence 9999999975533
No 158
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=26.55 E-value=1.5e+02 Score=19.81 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHhCCCcceeeec-CCCCCHhHHHHhHhhhcCCCCHHHHH
Q 022904 203 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG-VRLGLAEHIQDTNAIFMLSLDEDDVN 265 (290)
Q Consensus 203 ~~~~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g-~~~~~~~~l~enl~a~~~~Lt~e~~~ 265 (290)
++...|...|+.+|.|..+...+.+-..-. -+| .. +.+.++...+.+.--.+++-|+
T Consensus 12 ev~~~L~~rAa~~G~S~~~ylr~~Le~~a~----~~~~~~--~~~~l~r~~~~~~dl~D~~~m~ 69 (73)
T 3h87_C 12 DVLASLDAIAARLGLSRTEYIRRRLAQDAQ----TARVTV--TAADLRRLRGAVAGLGDPELMR 69 (73)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHT----SCCCCC--CHHHHHHHHHHSGGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhc----CCcccc--cHHHHHHHHHHHcccCCHHHHH
Confidence 334789999999999999988887755321 234 55 7888877765554334555443
No 159
>2omk_A Hypothetical protein; succinimide, thiamin pyrophosphokinase, structural genomics, protein structure initiative; 1.80A {Bacteroides thetaiotaomicron}
Probab=26.43 E-value=98 Score=25.50 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=34.5
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhh
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 255 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~ 255 (290)
+-|-.+.|+.++..++.-..+++|+..+..+|.-.|+..+
T Consensus 104 D~TD~e~Al~~a~~~g~~~I~i~Ga~GgRlDH~laNi~lL 143 (231)
T 2omk_A 104 ETNDQTKAVHYLQSKGIRKIAIVGATGKREDHTLGNISLL 143 (231)
T ss_dssp CCCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEECccCCchhHHHHHHHHH
Confidence 5678899999999998778889999999999999998654
No 160
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=26.38 E-value=2.6e+02 Score=22.64 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=71.0
Q ss_pred cEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEE-EEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCH--
Q 022904 33 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML-QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT-- 109 (290)
Q Consensus 33 ~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~-~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~-- 109 (290)
++.|+-.+.+.. .....+...+.+.+++.+...-.+. -+........ ...+...+..|++.|- .|.+.+|+.
T Consensus 90 ~~~l~iNls~~~--l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~-~~~~~~~l~~l~~~G~--~ialDdfG~g~ 164 (259)
T 3s83_A 90 NLTVSVNLSTGE--IDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRD-PERAAVILKTLRDAGA--GLALDDFGTGF 164 (259)
T ss_dssp CCEEEEECCTTG--GGSTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHC-HHHHHHHHHHHHHHTC--EEEEECC---C
T ss_pred ceEEEEEcCHHH--hCCcHHHHHHHHHHHHcCCCcceEEEEECCchhhhC-HHHHHHHHHHHHHCCC--EEEEECCCCCc
Confidence 467777776532 2234567778888888776532222 2221111112 4578888999999998 466666643
Q ss_pred HHHHHHHHcCCCeeeeecccccccc---C-----hhhhHHHHHHHhCCeEEecc
Q 022904 110 ERLRIILENGIPVVSNQVQHSVVDM---R-----PQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 110 ~~l~~~~~~~~~~~~~q~~~n~~~~---~-----~~~~~~~~~~~~gi~via~s 155 (290)
..+..+.. .+++++-+.-+.+.. . .-+.++..|+..|+.+++=+
T Consensus 165 ssl~~L~~--l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG 216 (259)
T 3s83_A 165 SSLSYLTR--LPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG 216 (259)
T ss_dssp HHHHHHHH--SCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred hhHHHHHh--CCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe
Confidence 45666654 567777666554422 1 13568899999999999854
No 161
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=26.30 E-value=2.7e+02 Score=23.92 Aligned_cols=101 Identities=9% Similarity=0.053 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEe-cCCCCC----ccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHcCCCe
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSN----PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 122 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~----~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 122 (290)
+.+.+.+..++.+ .-|.|.||+=--- +|.... +.+..+...++.|++.-.+ -|.|.++.++.++++++.+.++
T Consensus 31 ~~~~a~~~a~~~v-~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v-piSIDT~~~~Va~aAl~aGa~i 108 (314)
T 2vef_A 31 ALEQALQQARKLI-AEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV-LISIDTWKSQVAEAALAAGADL 108 (314)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHcCCCE
Confidence 3455555444333 4589999986532 232211 1145566777777766222 5889999999999999975443
Q ss_pred eeeeccccccccChhhhHHHHHHHhCCeEEecc
Q 022904 123 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 123 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~s 155 (290)
. +..|.... +.++++.+++.|++++.+.
T Consensus 109 I---NDVsg~~~--d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 109 V---NDITGLMG--DEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp E---EETTTTCS--CTTHHHHHHHHTCEEEEEC
T ss_pred E---EECCCCCC--ChHHHHHHHHcCCCEEEEe
Confidence 3 22333222 2479999999999999874
No 162
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=26.11 E-value=2.1e+02 Score=25.57 Aligned_cols=82 Identities=11% Similarity=-0.020 Sum_probs=53.4
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc---cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI---KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 143 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~ 143 (290)
++++++-.|-...+ ++.+.+|++.-.+ -..|=+-++...+..+++. ..++++|+..+-.-. ..-..+...
T Consensus 236 ~~l~~iEeP~~~~d-----~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~-~a~dii~~d~~~~GGitea~kia~l 309 (404)
T 3ekg_A 236 YGLKWIEEALPPDD-----YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEM-GCCDIIQPDVGWCGGVTELLKISAL 309 (404)
T ss_dssp GTCCEEECCSCTTC-----HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred cCCcEEecCCCccc-----HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHc-CCCCeEecChhhcCCccHHHHHHHH
Confidence 35666666644332 3456666666443 3567777788888888873 347777877654211 123568999
Q ss_pred HHHhCCeEEecc
Q 022904 144 CQLTGVKLITYG 155 (290)
Q Consensus 144 ~~~~gi~via~s 155 (290)
|+.+|+.++.++
T Consensus 310 A~a~gv~v~~h~ 321 (404)
T 3ekg_A 310 ADAHNALVVPHG 321 (404)
T ss_dssp HHHTTCEECCCC
T ss_pred HHHcCCEEEecC
Confidence 999999998665
No 163
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=26.03 E-value=96 Score=26.33 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEeccc
Q 022904 109 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 109 ~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~sp 156 (290)
++.++.+.++++.-.++|-.-+++.+. .+.+++|.++||.+++..|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~--~~~i~~a~~~gi~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDR--EAVIAAADDLGLFVLGVDP 279 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTH--HHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCH--HHHHHHHHHcCCEEEEeCC
Confidence 678888888787777789999986453 5899999999999999765
No 164
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=26.01 E-value=38 Score=29.34 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcC
Q 022904 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKG 274 (290)
Q Consensus 206 ~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~--------~~--Lt~e~~~~l~~~~~~~ 274 (290)
+..+++|+++|+...---+.=++..+.+..|++.+. +..|.+-.++|++ +| ++.++.++|.++.++.
T Consensus 60 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 136 (350)
T 4had_A 60 TRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRN 136 (350)
T ss_dssp HHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHc
Confidence 567888999987422123344567788999999888 8877776666653 35 5567777777766543
No 165
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=25.88 E-value=3.6e+02 Score=24.07 Aligned_cols=95 Identities=13% Similarity=0.043 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEE-Ecc-CCCHHHHHHHHHcCCCeeee
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALT-NFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~i-Gvs-~~~~~~l~~~~~~~~~~~~~ 125 (290)
+++...+-+.+.|+.+ +++++-.|-...+ ++.+.+|.+...|--. |=+ ..+...+..+++. ...+++
T Consensus 268 ~~~~ai~~~~~~l~~~-----~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~-~a~d~i 336 (427)
T 2pa6_A 268 TREELLDYYKALVDEY-----PIVSIEDPFHEED-----FEGFAMITKELDIQIVGDDLFVTNVERLRKGIEM-KAANAL 336 (427)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----HHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHH-TCCSEE
T ss_pred CHHHHHHHHHHHHhhC-----CCcEEEcCCChhh-----HHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHh-CCCCEE
Confidence 5666666666666654 6889998865444 4566667766555332 333 2348999998874 347777
Q ss_pred ecccccccc-ChhhhHHHHHHHhCCeEEe
Q 022904 126 QVQHSVVDM-RPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~-~~~~~~~~~~~~~gi~via 153 (290)
|+..+-.-. ..-..+...|+.+|+.++.
T Consensus 337 ~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 337 LLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp EECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 776654211 1235789999999999876
No 166
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=25.78 E-value=2.5e+02 Score=22.35 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=39.3
Q ss_pred HHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCC
Q 022904 213 SKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 277 (290)
Q Consensus 213 ~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~~~ 277 (290)
..++++..++|. +. =..+. +++.++..+.....++++++++.|-....+++.+
T Consensus 134 ~~~kL~efE~aq--La--------NL~Pe--TadEaraLIpSle~rlsdEeLeeILd~L~k~r~~ 186 (187)
T 1y14_A 134 KSTGLHPFEVAQ--LG--------SLACD--TADEAKTLIPSLNNKISDDELERILKELSNLETL 186 (187)
T ss_dssp HTTTCCHHHHHH--HH--------HSCCS--SHHHHHHHSGGGTTTSCHHHHHHHHHHHHHHCCC
T ss_pred HhcCCCHHHHHH--cC--------cCCCC--CHHHHHHHHHhhccCCCHHHHHHHHHHHHHhhcc
Confidence 447777776553 11 12466 8999999998888899999999998888776654
No 167
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=25.23 E-value=80 Score=24.73 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=32.3
Q ss_pred CCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccC
Q 022904 64 DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN 106 (290)
Q Consensus 64 g~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~ 106 (290)
.++-=|.++++++....+ ...+....++++| +..|+|++
T Consensus 74 ~i~~~D~vii~S~Sg~n~---~~ie~A~~ake~G-~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERS---DLLASLARYDAWH-TPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESCSCCH---HHHHHHHHHHHHT-CCEEEEES
T ss_pred CCCCCCEEEEEeCCCCCH---HHHHHHHHHHHCC-CcEEEEeC
Confidence 566779999999877665 6788888999987 57899997
No 168
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=25.16 E-value=1.3e+02 Score=26.65 Aligned_cols=86 Identities=12% Similarity=-0.001 Sum_probs=55.3
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
.++.++..|-...+ ++.+.+|++.-.| -..|=+-++.+.+..+++. ...+++|+..+-+-. ..-..+...|+
T Consensus 227 ~~i~~iEqP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~~GGit~~~~ia~~A~ 300 (393)
T 1wuf_A 227 YDLEMIEQPFGTKD-----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSI-GSCRAINLKLARVGGMSSALKIAEYCA 300 (393)
T ss_dssp GTCSEEECCSCSSC-----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHH-TCCSEEEECTGGGTSHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCcC-----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh-CCCCEEEeChhhhCCHHHHHHHHHHHH
Confidence 46667777754333 3455666665443 2445556788889988874 347777777664311 11357889999
Q ss_pred HhCCeEEecccccc
Q 022904 146 LTGVKLITYGTVMG 159 (290)
Q Consensus 146 ~~gi~via~spl~~ 159 (290)
.+|+.++..+.+..
T Consensus 301 ~~gi~~~~~~~~es 314 (393)
T 1wuf_A 301 LNEILVWCGGMLEA 314 (393)
T ss_dssp HTTCEEEECCCCCC
T ss_pred HcCCeEEecCCccc
Confidence 99999987765544
No 169
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=24.66 E-value=2.2e+02 Score=25.45 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCC--c-cEEEccCCCHHHHHHHHHcCCCee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK--I-KTVALTNFDTERLRIILENGIPVV 123 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~--i-r~iGvs~~~~~~l~~~~~~~~~~~ 123 (290)
.+.+...+-+++ |+. +++.++-.|-...+ ++.+.+|++.-. | -..|=+-++...+..+++. . .+
T Consensus 233 ~~~~~Ai~~~~~-l~~-----~~i~~iEqPl~~~d-----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~-~-~d 299 (415)
T 2p3z_A 233 QDVNYATKLAHA-CAP-----FNLKWIEECLPPQQ-----YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAET-G-ID 299 (415)
T ss_dssp CCHHHHHHHHHH-HGG-----GTCCEEECCSCTTC-----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHT-T-CS
T ss_pred CCHHHHHHHHHH-Hhh-----cCCceEeCCCCcch-----HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHc-C-CC
Confidence 455555555444 544 46778887754433 345555665432 2 2345556788889988874 3 88
Q ss_pred eeecccccccc-ChhhhHHHHHHHhCCeEEeccc
Q 022904 124 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 124 ~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~sp 156 (290)
++|+..+-+-. .....+...|+++|+.++..+.
T Consensus 300 ~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~ 333 (415)
T 2p3z_A 300 IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS 333 (415)
T ss_dssp EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh
Confidence 88887664311 1135789999999999997654
No 170
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=24.51 E-value=1.2e+02 Score=27.28 Aligned_cols=104 Identities=16% Similarity=0.288 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEecCCCCC---ccHHHHHHHHHHHHHcCC-ccEEEccCC------CHHHHHHHHHc
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN---PGYLDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN 118 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~---~~~~~~~~~l~~L~~~G~-ir~iGvs~~------~~~~l~~~~~~ 118 (290)
.+.+...++...+- .-+ -.+++...+... ......++.++.|+++|. |..||+..| .++.+...++.
T Consensus 148 ~~~i~~af~~Ar~~-dP~--a~l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~ 224 (436)
T 2d1z_A 148 NDWIEVAFRTARAA-DPA--AKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQN 224 (436)
T ss_dssp TTHHHHHHHHHHHH-CTT--SEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHH
T ss_pred hHHHHHHHHHHHhh-CCC--CEEEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHH
Confidence 45666666665543 211 234445433322 223567778888999887 889998654 23444444433
Q ss_pred ----CCCeeeeeccccccccCh--hhhHHHHHHHhC--CeEEecccc
Q 022904 119 ----GIPVVSNQVQHSVVDMRP--QQKMAELCQLTG--VKLITYGTV 157 (290)
Q Consensus 119 ----~~~~~~~q~~~n~~~~~~--~~~~~~~~~~~g--i~via~spl 157 (290)
+.++.+..+...- ... -..+++.|.++. ++|+-|..-
T Consensus 225 ~a~~g~~v~iTEldv~~--~qa~~y~~~~~~~~~~~~~~gvt~Wg~~ 269 (436)
T 2d1z_A 225 FAALGVDVAITELDIQG--ASSSTYAAVTNDCLAVSRCLGITVWGVR 269 (436)
T ss_dssp HHTTTCEEEEEEEEETT--CCHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred HHHcCCeEEEeecchhH--HHHHHHHHHHHHHHhcCCceEEEecccc
Confidence 5566655555542 222 246788888775 566666543
No 171
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=24.28 E-value=2.5e+02 Score=22.38 Aligned_cols=18 Identities=6% Similarity=-0.088 Sum_probs=14.6
Q ss_pred hhHHHHHHHhCCeEEecc
Q 022904 138 QKMAELCQLTGVKLITYG 155 (290)
Q Consensus 138 ~~~~~~~~~~gi~via~s 155 (290)
...++.|++.|+.++...
T Consensus 88 ~~~i~~a~~lG~~~v~~~ 105 (260)
T 1k77_A 88 DLALEYALALNCEQVHVM 105 (260)
T ss_dssp HHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 468899999999988653
No 172
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.12 E-value=2.6e+02 Score=22.95 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc--CCccEEEcc-CCCHHHHHHHHHcCCCeeee
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE--GKIKTVALT-NFDTERLRIILENGIPVVSN 125 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~--G~ir~iGvs-~~~~~~l~~~~~~~~~~~~~ 125 (290)
++....-++. |-.-|+ +++.+-.- .+ ...+.+++++++ +. .+|.. ..+.++++.+++.+-.|.+
T Consensus 45 ~~~a~~~a~a-l~~gGi---~~iEvt~~---t~---~a~e~I~~l~~~~~~~--~iGaGTVlt~~~a~~Ai~AGA~fIv- 111 (232)
T 4e38_A 45 AEDIIPLGKV-LAENGL---PAAEITFR---SD---AAVEAIRLLRQAQPEM--LIGAGTILNGEQALAAKEAGATFVV- 111 (232)
T ss_dssp GGGHHHHHHH-HHHTTC---CEEEEETT---ST---THHHHHHHHHHHCTTC--EEEEECCCSHHHHHHHHHHTCSEEE-
T ss_pred HHHHHHHHHH-HHHCCC---CEEEEeCC---CC---CHHHHHHHHHHhCCCC--EEeECCcCCHHHHHHHHHcCCCEEE-
Confidence 4544444443 445565 56666432 22 334455555553 34 44533 4689999999988776664
Q ss_pred eccccccccChhhhHHHHHHHhCCeEEe
Q 022904 126 QVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 126 q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
++ ..+.+++++|++.|+.++.
T Consensus 112 ----sP---~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 112 ----SP---GFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp ----CS---SCCHHHHHHHHHHTCEEEC
T ss_pred ----eC---CCCHHHHHHHHHcCCCEEc
Confidence 22 2345799999999999886
No 173
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=23.88 E-value=2.1e+02 Score=25.09 Aligned_cols=72 Identities=4% Similarity=-0.073 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCccEEE-ccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccccc
Q 022904 87 LNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 159 (290)
Q Consensus 87 ~~~l~~L~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl~~ 159 (290)
++.+.++++.-.|--.+ =+-++++.+..+++. ...+++|+..+-+-. ..-..+...|+.+|+.++..+.+..
T Consensus 226 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~es 299 (378)
T 2qdd_A 226 LDQCAHVARRVANPIMLDECLHEFSDHLAAWSR-GACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDVGGT 299 (378)
T ss_dssp HHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh-CCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCc
Confidence 45566666554443333 334567777777763 346666665554211 1135788999999999999864433
No 174
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=23.87 E-value=2.6e+02 Score=24.38 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=52.9
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++.++..|-... -++.+.+|++.-.|- ..|=+-++.+.+..+++. ..++++|+..+-+-. ..-..+...|+
T Consensus 223 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~GGit~~~~ia~~A~ 296 (372)
T 3tj4_A 223 LDIYWFEEPLWYD-----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDA-GAVAYVQPDVTRLGGITEYIQVADLAL 296 (372)
T ss_dssp SCEEEEESCSCTT-----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHHHH
T ss_pred cCCCEEECCCCch-----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHc-CCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 4566666664322 245566676654443 445566788888888873 457777776654211 12357899999
Q ss_pred HhCCeEEecc
Q 022904 146 LTGVKLITYG 155 (290)
Q Consensus 146 ~~gi~via~s 155 (290)
.+|+.++.++
T Consensus 297 ~~gi~~~~h~ 306 (372)
T 3tj4_A 297 AHRLPVVPHA 306 (372)
T ss_dssp HTTCCBCCCC
T ss_pred HcCCEEEecC
Confidence 9999998765
No 175
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=23.75 E-value=3.2e+02 Score=22.92 Aligned_cols=117 Identities=14% Similarity=0.154 Sum_probs=68.8
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccE-EEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCC--
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDM-LQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD-- 108 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl-~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~-- 108 (290)
..+.|+-.+++. .+....+...+.+.+++.+++.=-| +-|-....... ...+...+..|++.|---+ +..|+
T Consensus 113 ~~~~lsiNls~~--~l~~~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~-~~~~~~~l~~Lr~~G~~ia--lDDFGtG 187 (294)
T 2r6o_A 113 DDLTLSVNISTR--QFEGEHLTRAVDRALARSGLRPDCLELEITENVMLVM-TDEVRTCLDALRARGVRLA--LDDFGTG 187 (294)
T ss_dssp TTCCEEEEECGG--GGGGGHHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGC-CHHHHHHHHHHHHHTCEEE--EEEETSS
T ss_pred CCeEEEEEeCHH--HhCCcHHHHHHHHHHHHcCCCcCEEEEEEeCCchhhC-hHHHHHHHHHHHHCCCEEE--EECCCCC
Confidence 356677777653 2334667788888888888753222 11222111112 3678899999999997533 33332
Q ss_pred HHHHHHHHHcCCCeeeeecccccccc---Ch-----hhhHHHHHHHhCCeEEecc
Q 022904 109 TERLRIILENGIPVVSNQVQHSVVDM---RP-----QQKMAELCQLTGVKLITYG 155 (290)
Q Consensus 109 ~~~l~~~~~~~~~~~~~q~~~n~~~~---~~-----~~~~~~~~~~~gi~via~s 155 (290)
...+..+.. .+++.+-+.-+.+.. .. -+.++..|+..|+.|++=+
T Consensus 188 ~ssl~~L~~--l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG 240 (294)
T 2r6o_A 188 YSSLSYLSQ--LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG 240 (294)
T ss_dssp CBCHHHHHH--SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred chhHHHHHh--CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec
Confidence 223444443 456666655444322 11 2458899999999999843
No 176
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.58 E-value=1.1e+02 Score=25.09 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=15.9
Q ss_pred hhHHHHHHHhCCeEEecc
Q 022904 138 QKMAELCQLTGVKLITYG 155 (290)
Q Consensus 138 ~~~~~~~~~~gi~via~s 155 (290)
.++++.|+++|+.|.+|.
T Consensus 186 ~~~v~~~~~~G~~v~~WT 203 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWT 203 (238)
T ss_dssp TTHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEC
Confidence 468999999999999995
No 177
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=23.56 E-value=1.6e+02 Score=24.89 Aligned_cols=46 Identities=28% Similarity=0.242 Sum_probs=27.0
Q ss_pred CCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcC-CCCH
Q 022904 216 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML-SLDE 261 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~-~Lt~ 261 (290)
|-|+..-=.+=++++|.|+..++|-.|-+++...+.+++... ||++
T Consensus 216 GGSV~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii~~~~~~~~~~ 262 (267)
T 3ta6_A 216 GGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLPH 262 (267)
T ss_dssp CSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHHHHHHC-----
T ss_pred cCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHHHHHhcCCCCc
Confidence 444444344556777888888888776677767666665544 5554
No 178
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=23.55 E-value=97 Score=27.44 Aligned_cols=96 Identities=9% Similarity=-0.021 Sum_probs=0.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeecccccc-
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV- 132 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~- 132 (290)
.+-+.|+.+++.+| +.+.-.+-++.+.+|++. +.--..|=+-++.+.+..+++ ...++++|+..+-+
T Consensus 212 ~~~~~l~~~~i~~i----------EqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~-~~~~d~v~~k~~~~G 280 (382)
T 3dgb_A 212 RACRILGGNGIDLI----------EQPISRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAR-EGAASVFALKIAKNG 280 (382)
T ss_dssp HHHHHHHTTTCCCE----------ECCBCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHH-HTCCSEEEECHHHHT
T ss_pred HHHHHHhhcCcCee----------eCCCCccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHH-cCCCCEEEecccccC
Q ss_pred ccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 133 DMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
--..-..+...|+.+|+.++..+.+..++
T Consensus 281 Git~~~~i~~~A~~~gi~~~~~~~~es~i 309 (382)
T 3dgb_A 281 GPRATLRTAAIAEAAGIGLYGGTMLEGGI 309 (382)
T ss_dssp SHHHHHHHHHHHHHHTCEEEECCSCCCHH
T ss_pred CHHHHHHHHHHHHHcCCeEeecCCCccHH
No 179
>3qp1_A CVIR transcriptional regulator; quorum sensing, agonist, antagonist, LUXR, acylated homoseri lactone, transcription factor; HET: HL6; 1.55A {Chromobacterium violaceum} PDB: 3qp2_A* 3qp4_A* 3qp8_A*
Probab=23.42 E-value=2.5e+02 Score=21.51 Aligned_cols=87 Identities=8% Similarity=0.034 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc---CCCee
Q 022904 47 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN---GIPVV 123 (290)
Q Consensus 47 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~---~~~~~ 123 (290)
.+.+.+...+.+..+.+|.+++=+..+..+..... -.+..+-++|+..+-++...+. .++|+
T Consensus 30 ~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~~~---------------~~~~~~~~~nyP~~W~~~Y~~~~y~~~DPv 94 (182)
T 3qp1_A 30 ETENELKAFLDQVLSQAPSERLLLALGRLNNQNQI---------------QRLERVLNVSYPSDWLDQYMKENYAQHDPI 94 (182)
T ss_dssp CSHHHHHHHHHHHHTTSSCSEEEEEEEEECTTSCE---------------EEEEEEEESSSCHHHHHHHHHTTGGGTCGG
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeecCCCcccc---------------cchhhhhhcCCCHHHHHHHHHCCCcccCcc
Confidence 37899999999999999999886666655322111 0111267889998888887776 34555
Q ss_pred eeecccc--ccccC---------hhhhHHHHHHHhCC
Q 022904 124 SNQVQHS--VVDMR---------PQQKMAELCQLTGV 149 (290)
Q Consensus 124 ~~q~~~n--~~~~~---------~~~~~~~~~~~~gi 149 (290)
+.... + ++... .+..+++.++++|+
T Consensus 95 v~~~~-~~~p~~W~~~~~~~~~~~~~~~~~~a~~~Gl 130 (182)
T 3qp1_A 95 LRIHL-GQGPVMWEERFNRAKGAEEKRFIAEATQNGM 130 (182)
T ss_dssp GGSCT-TSCCEEHHHHHHTCCSHHHHHHHHHHHHTTC
T ss_pred hHhhc-CCCCEecCchhhcccChHHHHHHHHHHHcCC
Confidence 54444 3 22111 13678999999987
No 180
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=23.40 E-value=61 Score=20.28 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHcCCChHHHHHH
Q 022904 204 LLQTLKRIASKHGVSIPVVAVR 225 (290)
Q Consensus 204 ~~~~l~~la~~~g~s~~~~al~ 225 (290)
.-+.++.+.++.|+|..++|-+
T Consensus 9 ~g~~l~~~r~~~glsq~~lA~~ 30 (71)
T 2ewt_A 9 LGAKLRAIRTQQGLSLHGVEEK 30 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHH
Confidence 3467888888889998887764
No 181
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=23.29 E-value=32 Score=26.46 Aligned_cols=48 Identities=19% Similarity=0.042 Sum_probs=26.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEE
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA 103 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iG 103 (290)
.+.+.|+.+.-..+|.+++...|.-.....+++..++.|.+.| |+.+-
T Consensus 63 ~l~~ll~~~~~g~id~vvv~~ldRl~R~~~~~~~~~~~l~~~g-v~l~~ 110 (169)
T 3g13_A 63 DFQRMINDCMNGEIDMVFTKSISRFARNTLDTLKYVRMLKERN-IAVYF 110 (169)
T ss_dssp HHHHHHHHHHTTCCSEEEESCHHHHCSSHHHHHHHHHHHHTTT-CEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeccccccChHHHHHHHHHHHHcC-CEEEE
Confidence 4444444444455666666665544444556666666665554 44433
No 182
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=23.22 E-value=2e+02 Score=21.52 Aligned_cols=67 Identities=6% Similarity=-0.160 Sum_probs=35.9
Q ss_pred cccccCCChhhHHhhhchHHHhhhC-CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEE
Q 022904 5 LVFTYGMGLLKISMASSSIEFVERG-HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 71 (290)
Q Consensus 5 ~a~~Yg~G~sE~~lG~~~~~~~~~~-~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~ 71 (290)
.+|+|+.|.....+...+..+.... ....+.+.+=.+............+.+++.|+.+|...+.-+
T Consensus 53 g~p~y~~g~~p~~~~~fl~~l~~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~ 120 (169)
T 1obo_A 53 GCPTLNIGELQSDWEGLYSELDDVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYW 120 (169)
T ss_dssp EEEEETTTEECHHHHHHHTTGGGCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCE
T ss_pred EEeeCCCCcCCHHHHHHHHHhhhcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEee
Confidence 3678888876655554433332111 223344443333211111245677888999998887666543
No 183
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=23.19 E-value=2.1e+02 Score=26.29 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=16.8
Q ss_pred hhhHHHHHHHhCCeEEeccc
Q 022904 137 QQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 137 ~~~~~~~~~~~gi~via~sp 156 (290)
-.++.+.|+++||.+-.|-.
T Consensus 106 v~e~~~A~r~~Gl~~g~Y~s 125 (469)
T 3eyp_A 106 VREFVDACEEYGLKAGIYLG 125 (469)
T ss_dssp HHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEeC
Confidence 45899999999999998644
No 184
>3ix3_A Transcriptional activator protein LASR; quorum sensing receptor, triphenyl mimics, DNA- binding, quorum sensing; HET: OHN; 1.40A {Pseudomonas aeruginosa} PDB: 3ix4_A* 3ix8_A* 3jpu_A* 2uv0_E*
Probab=23.05 E-value=1.8e+02 Score=21.97 Aligned_cols=81 Identities=7% Similarity=-0.029 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHHHc---------
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--------- 118 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~~~--------- 118 (290)
+.+.+...+.+..+.+|.+++=+..++.+.... -..+-++|+..+-++...+.
T Consensus 15 s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~~------------------~~~~~~~nyP~~W~~~Y~~~~y~~~DPvv 76 (173)
T 3ix3_A 15 GKLEWSAILQKMASDLGFSKILFGLLPKDSQDY------------------ENAFIVGNYPAAWREHYDRAGYARVDPTV 76 (173)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEECTTCCCG------------------GGSEEEECSCHHHHHHHHHTTGGGTCHHH
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEEeecCCCCcc------------------cceeEecCCCHHHHHHHHHCcCeecCchh
Confidence 678999999999999999988666665542111 12244666666655555543
Q ss_pred ------CCCeeeeeccccccccChhhhHHHHHHHhCC
Q 022904 119 ------GIPVVSNQVQHSVVDMRPQQKMAELCQLTGV 149 (290)
Q Consensus 119 ------~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 149 (290)
..|+......+ .......+++.++++|+
T Consensus 77 ~~~~~~~~P~~W~~~~~---~~~~~~~~~~~a~~~Gl 110 (173)
T 3ix3_A 77 SHCTQSVLPIFWEPSIY---QTRKQHEFFEEASAAGL 110 (173)
T ss_dssp HHHHHCSSCEECCGGGC---CSHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCeEeCcccc---cChhHHHHHHHHHHcCC
Confidence 22333222111 11224679999999986
No 185
>3cq9_A Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=23.04 E-value=89 Score=25.64 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHHhCCCc-ceeeecCCCCCHhHHHHhHhhhc
Q 022904 216 GVSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 256 (290)
Q Consensus 216 g~s~~~~al~~~l~~~~v-~~~i~g~~~~~~~~l~enl~a~~ 256 (290)
+.|-.+.||.++..++.. ..+++|+..+..+|.-.|+..+-
T Consensus 77 D~TD~e~Al~~a~~~~~~~~I~i~Ga~GgR~DH~laNi~lL~ 118 (227)
T 3cq9_A 77 DHTDTQLAIKSIFEQLQPDEVHLYGATGGRLDHLLANMWLVL 118 (227)
T ss_dssp SSCHHHHHHHHHHHHTCCSEEEEESCSSSCHHHHHHHHSGGG
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEcCCCCchhHHHHHHHHHH
Confidence 468889999999998765 67789999999999999987653
No 186
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=22.94 E-value=1.7e+02 Score=21.27 Aligned_cols=86 Identities=10% Similarity=-0.003 Sum_probs=45.2
Q ss_pred cccccCC--ChhhHHhhhchHHHhhhC-CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcc-cEEEEecCCCCC
Q 022904 5 LVFTYGM--GLLKISMASSSIEFVERG-HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCL-DMLQFHWWDYSN 80 (290)
Q Consensus 5 ~a~~Yg~--G~sE~~lG~~~~~~~~~~-~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~i-Dl~~lH~p~~~~ 80 (290)
.+|+|+. |.-...+...+.++.... ....+.+.+= |..... ......+.+++.|+.+|...+ +.+.+.....+
T Consensus 56 g~pty~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~-G~~~y~-~~~~a~~~l~~~l~~~G~~~~~~~~~~~~~p~~- 132 (148)
T 3f6r_A 56 GCSAWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFAS-GDQEYE-HFCGAVPAIEERAKELGATIIAEGLKMEGDASN- 132 (148)
T ss_dssp EECEECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEE-ECTTSS-STTTHHHHHHHHHHHTTCEECSCCEEEESSGGG-
T ss_pred EecccCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEe-CCCCHH-HHHHHHHHHHHHHHHcCCEEeecceEeecCcch-
Confidence 4678987 766655665554442211 2233333332 322111 224566778999999998777 45555542222
Q ss_pred ccHHHHHHHHHHHH
Q 022904 81 PGYLDALNHLTDLK 94 (290)
Q Consensus 81 ~~~~~~~~~l~~L~ 94 (290)
. .+++.+..+++.
T Consensus 133 ~-~~~~~~~~~~l~ 145 (148)
T 3f6r_A 133 D-PEAVASFAEDVL 145 (148)
T ss_dssp C-HHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHH
Confidence 3 455555555544
No 187
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=22.93 E-value=4e+02 Score=23.95 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=69.8
Q ss_pred CcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCcc-EEEccCCCHH
Q 022904 32 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTE 110 (290)
Q Consensus 32 ~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir-~iGvs~~~~~ 110 (290)
+++-|...... ..+.+...+-+ +.|+.++ +.++..|-.. +-++.+.+|++.-.|- ..|=+-++.+
T Consensus 239 ~d~~L~vDaN~---~~~~~~A~~~~-~~L~~~~-----i~~iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~ 304 (440)
T 3t6c_A 239 FSVELLHDAHE---RITPINAIHMA-KALEPYQ-----LFFLEDPVAP-----ENTEWLKMLRQQSSTPIAMGELFVNVN 304 (440)
T ss_dssp SSSEEEEECTT---CSCHHHHHHHH-HHTGGGC-----CSEEECSSCG-----GGGGGHHHHHHHCCSCEEECTTCCSHH
T ss_pred CCCeEEEECCC---CCCHHHHHHHH-HHhhhcC-----CCEEECCCCh-----hhHHHHHHHHhhcCCCEEeCcccCCHH
Confidence 35566666653 34555544333 3455554 4455666432 2345677777764443 4566678899
Q ss_pred HHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHHHhCCeEEecccc
Q 022904 111 RLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 111 ~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~via~spl 157 (290)
.+..+++. ..++++|+..+-+-. ..-..+...|+.+|+.++.++..
T Consensus 305 ~~~~~i~~-~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 351 (440)
T 3t6c_A 305 EWKPLIDN-KLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSPG 351 (440)
T ss_dssp HHHHHHHT-TCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCSS
T ss_pred HHHHHHHc-CCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccCC
Confidence 99999884 457888887765321 12357899999999999877653
No 188
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=22.83 E-value=1.9e+02 Score=25.68 Aligned_cols=95 Identities=8% Similarity=0.003 Sum_probs=0.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCCCCccHHHH-HHHHHHHHHc-CCccEEEccCCCHHHHHHHHHcCCCeeeeecccccc
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDA-LNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV 132 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~-~~~l~~L~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~ 132 (290)
.+-+.|+.+++++|. ++..+ +- ++.+.++++. +.--..|=+-++.+.+..+++ ...++++|+..+-+
T Consensus 217 ~~~~~L~~~~i~~iE-------eP~~~---~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~-~~a~d~v~~k~~~~ 285 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE-------EPLRA---DRPAAEWAELAQAAPMPLAGGENIAGVAAFETALA-ARSLRVMQPDLAKW 285 (392)
T ss_dssp HHHHHHGGGCCSEEE-------CCSCT---TSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHH-HTCEEEECCCTTTT
T ss_pred HHHHHHHHhCCCEEE-------CCCCc---cchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHH-cCCCCEEEeCcchh
Q ss_pred -ccChhhhHHHHHHHhCCeEEecccccccc
Q 022904 133 -DMRPQQKMAELCQLTGVKLITYGTVMGGL 161 (290)
Q Consensus 133 -~~~~~~~~~~~~~~~gi~via~spl~~G~ 161 (290)
--..-..+...|+.+|+.++... +..|+
T Consensus 286 GGit~~~~ia~~A~~~gi~~~~h~-~~~~i 314 (392)
T 3ddm_A 286 GGFSGCLPVARAVVAAGLRYCPHY-LGAGI 314 (392)
T ss_dssp THHHHHHHHHHHHHHTTCEECCEE-CSCHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEecC-CchHH
No 189
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=22.65 E-value=29 Score=26.97 Aligned_cols=63 Identities=21% Similarity=0.219 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHhCCCcceeeecCCCCCHhHHHHhHhhhcCCCCHHHHHHHHHH
Q 022904 206 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 270 (290)
Q Consensus 206 ~~l~~la~~~g~s~~~~al~~~l~~~~v~~~i~g~~~~~~~~l~enl~a~~~~Lt~e~~~~l~~~ 270 (290)
+.+.+.-.+.|+|..++|=+==++.-.+++++.|-.+-+.++.+...+++ .|++++++.|...
T Consensus 16 ~~I~~AK~~KGLTwe~IAe~iG~S~v~vtaa~lGQ~~ls~e~A~kLa~~L--gL~~e~~~~l~~~ 78 (156)
T 1dw9_A 16 DAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKL--DLDEDSILLLQMI 78 (156)
T ss_dssp HHHHHHHHHTTCCHHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHHHHHT--TCCHHHHHHTTSB
T ss_pred HHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHh--CcCHHHHHHHhcC
Confidence 34444444445555554433222222234444555544788777777766 4888887766543
No 190
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=22.62 E-value=2.9e+02 Score=21.93 Aligned_cols=76 Identities=9% Similarity=0.006 Sum_probs=45.4
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCC-------CHHHHHHHHHcCCCeeeeeccccc--c-cc---
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNF-------DTERLRIILENGIPVVSNQVQHSV--V-DM--- 134 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~-------~~~~l~~~~~~~~~~~~~q~~~n~--~-~~--- 134 (290)
+|+..+|.-+. +......+. .|.-||.... +...+..+.+.++.+.++--.+.- . .|
T Consensus 76 ~di~~v~~~~~---------~~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~ 145 (212)
T 1v77_A 76 SYLIYVESNDL---------RVIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANL 145 (212)
T ss_dssp SSEEEEECSCH---------HHHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHH
T ss_pred cEEEEEEeCCH---------HHHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcchHHHH
Confidence 78899997421 233346667 8888886543 245555566556656654444210 0 00
Q ss_pred -ChhhhHHHHHHHhCCeEEe
Q 022904 135 -RPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 135 -~~~~~~~~~~~~~gi~via 153 (290)
..-..++..|++.|+.++.
T Consensus 146 ~~~~~~il~l~k~~g~~ivi 165 (212)
T 1v77_A 146 LRFMMKAWKLVEKYKVRRFL 165 (212)
T ss_dssp HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEE
Confidence 1124789999999998885
No 191
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=22.48 E-value=2.1e+02 Score=22.52 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHHHHh--hhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc---CCccEEEccCCCHHHHHHHHHcCC
Q 022904 46 KMTSSIVRESIDVSRR--RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENGI 120 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~--~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~---G~ir~iGvs~~~~~~l~~~~~~~~ 120 (290)
..+-+.|.+.+.+--+ .+|+ .++.+|=- . -.++.+.+.+...+ |.|-.=|--+|+.-.+..++. .+
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~-~l~~~QSN-----~--EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~-~v 103 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDV-ELEFFQTN-----F--EGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIM-LA 103 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCE-EEEEEECS-----C--HHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHH-TS
T ss_pred cCCHHHHHHHHHHHhccccCCC-EEEEEeeC-----c--HHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHH-hC
Confidence 4578999999999888 8886 34544422 2 36888899888755 444444666666666777766 45
Q ss_pred CeeeeeccccccccC
Q 022904 121 PVVSNQVQHSVVDMR 135 (290)
Q Consensus 121 ~~~~~q~~~n~~~~~ 135 (290)
..-++.++.+-.+.+
T Consensus 104 ~~P~VEVHiSNi~aR 118 (176)
T 2c4w_A 104 GKPVIEVHLTNIQAR 118 (176)
T ss_dssp SSCEEEEESSCGGGS
T ss_pred CCCEEEEEecCcccc
Confidence 566677777765544
No 192
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=22.47 E-value=65 Score=20.25 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHH
Q 022904 203 VLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 203 ~~~~~l~~la~~~g~s~~~~al~~ 226 (290)
...+.++.+.++.|+|..++|-+-
T Consensus 13 ~~~~~l~~~r~~~g~s~~~lA~~~ 36 (74)
T 1y7y_A 13 KFGQRLRELRTAKGLSQETLAFLS 36 (74)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 334678888888899988877554
No 193
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.26 E-value=2.1e+02 Score=23.35 Aligned_cols=87 Identities=8% Similarity=0.066 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHHHcCCCeeeeec
Q 022904 49 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-FDTERLRIILENGIPVVSNQV 127 (290)
Q Consensus 49 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~~q~ 127 (290)
++....-. +.|-.=|++.|- +-. ..+ ..++.++.++++=---.||.-+ .+.++++.+++.+-.|.+.
T Consensus 24 ~~~a~~~a-~al~~gGi~~iE---vt~---~t~---~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs-- 91 (217)
T 3lab_A 24 LVHAIPMA-KALVAGGVHLLE---VTL---RTE---AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS-- 91 (217)
T ss_dssp GGGHHHHH-HHHHHTTCCEEE---EET---TST---THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE--
T ss_pred HHHHHHHH-HHHHHcCCCEEE---EeC---CCc---cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe--
Confidence 34444433 344455765443 332 122 4445555666541113566654 5899999999987766643
Q ss_pred cccccccChhhhHHHHHHHhCC------eEEe
Q 022904 128 QHSVVDMRPQQKMAELCQLTGV------KLIT 153 (290)
Q Consensus 128 ~~n~~~~~~~~~~~~~~~~~gi------~via 153 (290)
| ....+++++|+++|+ .++.
T Consensus 92 ---P---~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 92 ---P---GLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp ---S---SCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred ---C---CCcHHHHHHHHHcCCCccCCCeEeC
Confidence 2 234589999999999 7776
No 194
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=22.23 E-value=76 Score=20.92 Aligned_cols=25 Identities=20% Similarity=0.117 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHcCCChHHHHHHH
Q 022904 202 QVLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 202 ~~~~~~l~~la~~~g~s~~~~al~~ 226 (290)
....+.++.+.++.|+|..++|-+-
T Consensus 17 ~~~~~~l~~~r~~~glsq~elA~~~ 41 (83)
T 2a6c_A 17 SQLLIVLQEHLRNSGLTQFKAAELL 41 (83)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3444778888888899988887654
No 195
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=22.15 E-value=1.7e+02 Score=23.80 Aligned_cols=16 Identities=31% Similarity=0.544 Sum_probs=13.7
Q ss_pred hhHHHHHHHhCCeEEe
Q 022904 138 QKMAELCQLTGVKLIT 153 (290)
Q Consensus 138 ~~~~~~~~~~gi~via 153 (290)
...+++|++.|+..+.
T Consensus 87 ~~~i~~A~~lG~~~v~ 102 (281)
T 3u0h_A 87 PDRARLCARLGARSVT 102 (281)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 3588999999999887
No 196
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=21.92 E-value=1.9e+02 Score=24.95 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=72.0
Q ss_pred CCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEE-EecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCC-
Q 022904 31 QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ-FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD- 108 (290)
Q Consensus 31 R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~-lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~- 108 (290)
...+.++..+++. .+....+...+.+.+++.+.+.--|.+ +........ ...+...|+.|++.|-- |.+..|+
T Consensus 161 ~~~~~~svnls~~--~l~~~~~~~~~~~~l~~~~~~~~~l~lEitE~~~~~~-~~~~~~~l~~Lr~~G~~--ialDDFGt 235 (340)
T 4hjf_A 161 MGNLTVSVNLSTG--EIDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRD-PERAAVILKTLRDAGAG--LALDDFGT 235 (340)
T ss_dssp CCCCEEEEECCTT--CTTCTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHTS-HHHHHHHHHHHHHHTCE--EEEECTTS
T ss_pred cCCceeEEEcChH--hhcCchHHHHHHHHHHhhCCCcceEEEEeeccccccc-hHHHHHHHHHHHHcCCC--ccccCCCC
Confidence 3567778777654 234456777788888888765333322 222111122 46788999999999984 5555543
Q ss_pred -HHHHHHHHHcCCCeeeeeccccccccC---h-----hhhHHHHHHHhCCeEEec
Q 022904 109 -TERLRIILENGIPVVSNQVQHSVVDMR---P-----QQKMAELCQLTGVKLITY 154 (290)
Q Consensus 109 -~~~l~~~~~~~~~~~~~q~~~n~~~~~---~-----~~~~~~~~~~~gi~via~ 154 (290)
...+..+. ..+++.+-+.-+.+..- . -+.++.+|+..|+.|++=
T Consensus 236 G~ssl~~L~--~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vvAE 288 (340)
T 4hjf_A 236 GFSSLSYLT--RLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAE 288 (340)
T ss_dssp SSCGGGTGG--GSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CcchHHHHH--hCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEEEE
Confidence 23344444 35677766665544321 1 246789999999999983
No 197
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=21.87 E-value=1.2e+02 Score=26.90 Aligned_cols=86 Identities=8% Similarity=-0.037 Sum_probs=55.9
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccccc-ChhhhHHHHHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 145 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 145 (290)
+++.++-.|-...+ ++.+.+|++.-.| -..|=+-++...+..+++. ..++++|+..+-+-. ..-..+...|+
T Consensus 215 ~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~-~a~d~v~~k~~~~GGit~~~~ia~~A~ 288 (388)
T 3qld_A 215 YDLQFIEQPLPEDD-----WFDLAKLQASLRTPVCLDESVRSVRELKLTARL-GAARVLNVKPGRLGGFGATLRALDVAG 288 (388)
T ss_dssp GCCSCEECCSCTTC-----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCCcEEECCCCccc-----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHc-CCCCEEEECchhhCCHHHHHHHHHHHH
Confidence 45666776654333 3456666665333 3567777888888888874 347777777654311 12357899999
Q ss_pred HhCCeEEecccccc
Q 022904 146 LTGVKLITYGTVMG 159 (290)
Q Consensus 146 ~~gi~via~spl~~ 159 (290)
.+|+.++..+.+..
T Consensus 289 ~~gi~~~~~~~~es 302 (388)
T 3qld_A 289 EAGMAAWVGGMYET 302 (388)
T ss_dssp HTTCEEEECCCCCC
T ss_pred HCCCeEEecCccch
Confidence 99999987765533
No 198
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=21.82 E-value=3.3e+02 Score=22.23 Aligned_cols=74 Identities=18% Similarity=0.137 Sum_probs=42.9
Q ss_pred hhhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHH
Q 022904 18 MASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLK 94 (290)
Q Consensus 18 lG~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~ 94 (290)
.|-.|..+...|.+=.+++.|.-.... ..+.+.=++...++.+.||++. +.+|..||......+++.+.+.++.
T Consensus 20 ~Ggtia~~~~~G~~V~vv~lT~G~~g~-~~~~~~R~~E~~~A~~~LGv~~--~~~L~~~D~~~~~~~~~~~~l~~~i 93 (242)
T 2ixd_A 20 MAGTIAKYTKQGYEVGICDLTEADLSS-NGTIELRKEEAKVAARIMGVKT--RLNLAMPDRGLYMKEEYIREIVKVI 93 (242)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCTTCS-SSCHHHHHHHHHHHHHHHTCCE--EEEEEECTTCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEEEcCCCCCC-CCCHHHHHHHHHHHHHHcCCCe--EEECCCCCCCCCChHHHHHHHHHHH
Confidence 454455555556554555556443221 2244555678899999999873 5778888776553334444444433
No 199
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=21.69 E-value=3.3e+02 Score=24.05 Aligned_cols=81 Identities=11% Similarity=-0.108 Sum_probs=48.9
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHc------CCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccccChhhhHH
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEE------GKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMA 141 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~------G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~ 141 (290)
++++++-.|-. .+ +..+.+|++. +-.-+.|-+-+ .+.+..+++. ..++++|+..+-.--..-..+.
T Consensus 227 ~~l~~iEeP~~-~d-----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~-~a~dii~~d~~~GGitea~kia 298 (392)
T 3v5c_A 227 VNLYWLEAAFH-ED-----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATR-GRVDVLQYDIIWPGFTHWMELG 298 (392)
T ss_dssp SCCCEEECSSS-CC-----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHT-TSCCEECCBTTTBCHHHHHHHH
T ss_pred CCCeEEeCCCC-cC-----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHc-CCCcEEEeCCCCCCHHHHHHHH
Confidence 45666666654 22 2234444442 33445566666 6667777763 3578888877631111235688
Q ss_pred HHHHHhCCeEEeccc
Q 022904 142 ELCQLTGVKLITYGT 156 (290)
Q Consensus 142 ~~~~~~gi~via~sp 156 (290)
+.|+.+|+.++.++.
T Consensus 299 ~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 299 EKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHTTCEECCBCC
T ss_pred HHHHHcCCeEEecCC
Confidence 999999999987764
No 200
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=21.50 E-value=2.1e+02 Score=24.61 Aligned_cols=74 Identities=12% Similarity=0.313 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCC-ccEEEccCC------CHHHHHHHHHc----CCCeeeeecccccccc-----------------C
Q 022904 84 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDM-----------------R 135 (290)
Q Consensus 84 ~~~~~~l~~L~~~G~-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~-----------------~ 135 (290)
...++.++.|++.|. |-.||+-.| +++.+...++. +.++-+..+..+.... .
T Consensus 188 ~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~q 267 (331)
T 1n82_A 188 EKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQ 267 (331)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcCCeEEEEeceecCCCCcccccccCCCCHHHHHHH
Confidence 456677888999997 888888544 46666666655 5566555555543210 0
Q ss_pred h--hhhHHHHHHHhC--Ce-EEecccc
Q 022904 136 P--QQKMAELCQLTG--VK-LITYGTV 157 (290)
Q Consensus 136 ~--~~~~~~~~~~~g--i~-via~spl 157 (290)
. -..+++.|.++. |. |+-|+.-
T Consensus 268 A~~~~~~~~~~~~~~~~v~git~Wg~~ 294 (331)
T 1n82_A 268 AERYGQIFALFKEYRDVIQSVTFWGIA 294 (331)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEESCSB
T ss_pred HHHHHHHHHHHHhCcCcccEEEEECCC
Confidence 1 136788898876 55 5555433
No 201
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A
Probab=21.49 E-value=1.9e+02 Score=27.28 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHH
Q 022904 48 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIIL 116 (290)
Q Consensus 48 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~ir~iGvs~~~~~~l~~~~ 116 (290)
..+...+++.+.|+.||+++-+-.. .....++...+..++|.++|+. |. |.-+.+.+.+..
T Consensus 73 ~~~e~~~~I~edL~wLGl~wde~~~-----~qSer~~~~~~~a~~Li~~G~A-Y~--c~ct~eel~~~r 133 (553)
T 1qtq_A 73 EDIEYVESIKNDVEWLGFHWSGNVR-----YSSDYFDQLHAYAIELINKGLA-YV--DELTPEQIREYR 133 (553)
T ss_dssp CCHHHHHHHHHHHHHTTCCCSSSCE-----EGGGGHHHHHHHHHHHHHTTSE-EE--ECCCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCCCCCCe-----ehcccHHHHHHHHHHHHHCCCc-ee--cCCCHHHHHHHh
Confidence 3467788999999999998766322 2234467888999999999996 44 444777777655
No 202
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=21.48 E-value=4e+02 Score=23.03 Aligned_cols=126 Identities=12% Similarity=0.057 Sum_probs=61.4
Q ss_pred hhchHHHhhhCCCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHc-C
Q 022904 19 ASSSIEFVERGHQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G 97 (290)
Q Consensus 19 G~~~~~~~~~~~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~-G 97 (290)
|.-+-+++....|+.+.+..-++. ..+.+.+.+. .+.+++.|- ..+-++--. .. ..+....++.+++. |
T Consensus 117 g~Pl~~lLGg~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~---~~~K~Kvg~--~~-~~~d~~~v~avr~~~g 186 (370)
T 2chr_A 117 GVSIAELLGGPLRSAIPIAWTLAS---GDTKRDLDSA-VEMIERRRH---NRFKVKLGF--RS-PQDDLIHMEALSNSLG 186 (370)
T ss_dssp TCCHHHHTTCCSCSEEEBEEEECS---SCHHHHHHHH-HHHHHTTSC---CEEEEECSS--SC-HHHHHHHHHHHHHHTT
T ss_pred CCccccccCCccccccceeeeecc---CchhhhHHHH-HHHHhhccc---ceeeccccc--CC-hHHHHHHHHHHHHhcC
Confidence 333445543345665555444432 1133433333 334444443 334444211 11 34555556666553 3
Q ss_pred CccEEEcc---CCCHHHHHHHHHc--CCCeeeeeccccccccChhhhHHHHHHHhCCeEEecccc
Q 022904 98 KIKTVALT---NFDTERLRIILEN--GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 157 (290)
Q Consensus 98 ~ir~iGvs---~~~~~~l~~~~~~--~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via~spl 157 (290)
.=-.|-+. .|+.++..++.+. ...+.++.-++.+- +. .++...+++.++.+.+=..+
T Consensus 187 ~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~iEeP~~~~--d~-~~~~~l~~~~~ipIa~dE~~ 248 (370)
T 2chr_A 187 SKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQPVGRE--NT-QALRRLSDNNRVAIMADESL 248 (370)
T ss_dssp TTSEEEEECTTCCCTHHHHHHHHHHHTTTCCEEECCSCSS--CH-HHHHHHHHHCSSEEEESSSC
T ss_pred CCcEEEecCCCCCCHHHHHHHHHHHHhcCCceecCCCChh--hh-hhhhHHhhhccCCccCCccC
Confidence 22234333 4666665555443 56677777776542 22 35667777778877764433
No 203
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=21.44 E-value=2.5e+02 Score=24.34 Aligned_cols=76 Identities=12% Similarity=0.246 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHcCC-ccEEEccCC------CHHHHHHHHHc----CCCeeeeecccccccc----------C-------
Q 022904 84 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDM----------R------- 135 (290)
Q Consensus 84 ~~~~~~l~~L~~~G~-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~----------~------- 135 (290)
...++.++.|+++|. |..||+-.| +++.+...++. +.++.+-.+..+.... .
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Q 266 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQ 266 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcCCcEEEeecccCCccccccccccCCCCHHHHHHH
Confidence 467888999999996 998997654 45666666665 6666666655543210 0
Q ss_pred --hhhhHHHHHHHh--CC-eEEecccccc
Q 022904 136 --PQQKMAELCQLT--GV-KLITYGTVMG 159 (290)
Q Consensus 136 --~~~~~~~~~~~~--gi-~via~spl~~ 159 (290)
.-+.+++.|.++ .| +|..|+.-.+
T Consensus 267 a~~y~~~~~~~~~~~~~v~giT~WG~~D~ 295 (331)
T 3emz_A 267 QKRYEDIFGLFREYRSNITSVTFWGVADN 295 (331)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEESSSSTT
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 014688999985 34 5666665443
No 204
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=21.11 E-value=3.8e+02 Score=22.73 Aligned_cols=71 Identities=6% Similarity=-0.125 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCCccEEEccCC----------CHHHHHHHHHcCCCeeeeeccccc---------cccChhhhHHHHHH
Q 022904 85 DALNHLTDLKEEGKIKTVALTNF----------DTERLRIILENGIPVVSNQVQHSV---------VDMRPQQKMAELCQ 145 (290)
Q Consensus 85 ~~~~~l~~L~~~G~ir~iGvs~~----------~~~~l~~~~~~~~~~~~~q~~~n~---------~~~~~~~~~~~~~~ 145 (290)
..-+.+.++.++--=|++|+..+ ..+.++++++. ..+..+.+..+. ++...-..+++.|.
T Consensus 91 ~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~-~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~ 169 (350)
T 2gwg_A 91 ICNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKE-YGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMV 169 (350)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHT-SCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhc-cCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence 34455666666533344454332 23556666642 234444443221 11222357999999
Q ss_pred HhCCeEEeccc
Q 022904 146 LTGVKLITYGT 156 (290)
Q Consensus 146 ~~gi~via~sp 156 (290)
+.|+.|+.+..
T Consensus 170 e~~lpv~iH~~ 180 (350)
T 2gwg_A 170 ELEIPAMIHVS 180 (350)
T ss_dssp HHTCCEEECCC
T ss_pred HcCCeEEECCC
Confidence 99999998754
No 205
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.07 E-value=1.2e+02 Score=22.98 Aligned_cols=51 Identities=16% Similarity=0.155 Sum_probs=29.1
Q ss_pred ccEEEEecCCCCCccHHHHHHHHHHHHHcC-CccEEEccC----CCHHHHHHHHHc
Q 022904 68 LDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTN----FDTERLRIILEN 118 (290)
Q Consensus 68 iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G-~ir~iGvs~----~~~~~l~~~~~~ 118 (290)
|+.++-++|+.....+.+.-+..+.+.++| .|..++||. -+++.+.++.+.
T Consensus 37 l~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~ 92 (170)
T 4hde_A 37 ADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK 92 (170)
T ss_dssp EEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred EEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHH
Confidence 344444556555443334444444455555 588888873 467888877763
No 206
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=20.97 E-value=2.1e+02 Score=24.42 Aligned_cols=71 Identities=11% Similarity=0.106 Sum_probs=47.5
Q ss_pred CCCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCCCcccEEEEecCC-CCCcc--------------------H-----
Q 022904 30 HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD-YSNPG--------------------Y----- 83 (290)
Q Consensus 30 ~R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~-~~~~~--------------------~----- 83 (290)
...+|.+++-.+. .++...+...+.+++||.+.++.+-+.... ...+. +
T Consensus 55 ~~~~I~~IptAs~-----~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~ 129 (291)
T 3en0_A 55 NDAIIGIIPSASR-----EPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLA 129 (291)
T ss_dssp GGCEEEEECTTCS-----SHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHT
T ss_pred CCCeEEEEeCCCC-----ChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHH
Confidence 4467777765543 356777788899999998777776663221 11110 0
Q ss_pred -HHHHHHHHHHHHcCCccEEEcc
Q 022904 84 -LDALNHLTDLKEEGKIKTVALT 105 (290)
Q Consensus 84 -~~~~~~l~~L~~~G~ir~iGvs 105 (290)
..+.+.|.+.+++|++-++|.|
T Consensus 130 ~t~l~~~L~~~~~~G~~~~~GtS 152 (291)
T 3en0_A 130 DTPLMDRIRQRVHNGEISLAGTS 152 (291)
T ss_dssp TCHHHHHHHHHHHTTSSEEEEET
T ss_pred hCCHHHHHHHHHHCCCeEEEEeC
Confidence 2566788888899977788988
No 207
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=20.88 E-value=4.3e+02 Score=23.22 Aligned_cols=100 Identities=9% Similarity=0.049 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHHHcCCCeee
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTVALTNFDTERLRIILENGIPVVS 124 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~ 124 (290)
.++.+. +..+-+.|.++|+++|.+-+ |.. .....++++.+++.|+ ++..+.+-...+.++.+.+.+.+..-
T Consensus 21 ~~~~~~-k~~ia~~L~~~Gv~~IE~g~---p~~----~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~ 92 (382)
T 2ztj_A 21 NFSTQD-KVEIAKALDEFGIEYIEVTT---PVA----SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGID 92 (382)
T ss_dssp CCCHHH-HHHHHHHHHHHTCSEEEECC---TTS----CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CcCHHH-HHHHHHHHHHcCcCEEEEcC---CcC----CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEE
Confidence 445555 44555667889999888842 322 2355677777777664 33344443456778888887655333
Q ss_pred eeccccccc-----cCh------hhhHHHHHHHhC--CeEEe
Q 022904 125 NQVQHSVVD-----MRP------QQKMAELCQLTG--VKLIT 153 (290)
Q Consensus 125 ~q~~~n~~~-----~~~------~~~~~~~~~~~g--i~via 153 (290)
+-+..|.++ ... -.+.+++++++| +.+..
T Consensus 93 i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~ 134 (382)
T 2ztj_A 93 LLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF 134 (382)
T ss_dssp EEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 222222211 111 246789999999 76553
No 208
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=20.67 E-value=3.3e+02 Score=23.10 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhhhCCCcccEEEEecCCCCCc---cHHHHHHHHHHHHHcCC-ccEEEccCC-----C-HHHHHHHHHc-
Q 022904 50 SIVRESIDVSRRRMDVPCLDMLQFHWWDYSNP---GYLDALNHLTDLKEEGK-IKTVALTNF-----D-TERLRIILEN- 118 (290)
Q Consensus 50 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~---~~~~~~~~l~~L~~~G~-ir~iGvs~~-----~-~~~l~~~~~~- 118 (290)
+.+...++...+- .-+ -.+++.......+ .....++.++.|++.|. |..||+-.| . .+.+...++.
T Consensus 150 ~~i~~af~~Ar~~-dP~--a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~ 226 (303)
T 1ta3_B 150 DFVRIAFETARAA-DPD--AKLYINDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSL 226 (303)
T ss_dssp HHHHHHHHHHHHH-CTT--SEEEEEESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCC--CEEEeccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHH
Confidence 5555555555443 221 2334443332222 24567788888999997 888998433 1 2444444443
Q ss_pred ---CC-CeeeeeccccccccCh--hhhHHHHHHHhC--CeEEecccc
Q 022904 119 ---GI-PVVSNQVQHSVVDMRP--QQKMAELCQLTG--VKLITYGTV 157 (290)
Q Consensus 119 ---~~-~~~~~q~~~n~~~~~~--~~~~~~~~~~~g--i~via~spl 157 (290)
+. ++.+..+..+- ... -..+++.|.++. ++|+-|+.-
T Consensus 227 a~~G~~pi~iTEldi~~--~qa~~y~~~~~~~~~~~~v~git~Wg~~ 271 (303)
T 1ta3_B 227 ANTGVSEVAITELDIAG--AASSDYLNLLNACLNEQKCVGITVWGVS 271 (303)
T ss_dssp HTTCCSEEEEEEEEETT--CCHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred HHCCCCeEEEeeCCcCh--hHHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 56 55555555442 222 236788888875 566666543
No 209
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=20.56 E-value=1.4e+02 Score=20.18 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=27.6
Q ss_pred CCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022904 243 GLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 275 (290)
Q Consensus 243 ~~~~~l~enl~a~~~~Lt~e~~~~l~~~~~~~~ 275 (290)
++.++|.+.++.+++..+++.++.+.++...++
T Consensus 3 vs~e~l~~el~~Fgi~c~d~v~eKl~ElC~~y~ 35 (78)
T 4e2i_2 3 ASAQQLAEELQIFGLDCEEALIEKLVELCVQYG 35 (78)
T ss_dssp CCHHHHHHHHHHTTCCCCHHHHHHHHTHHHHSC
T ss_pred cCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcC
Confidence 479999999999999999888888887776554
No 210
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=20.51 E-value=1.3e+02 Score=17.08 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHcCCChHHHHHHH
Q 022904 203 VLLQTLKRIASKHGVSIPVVAVRY 226 (290)
Q Consensus 203 ~~~~~l~~la~~~g~s~~~~al~~ 226 (290)
++.+.|..+|++.|.|.+++.-..
T Consensus 12 ~l~~~Ld~~a~~~g~srS~~ir~a 35 (45)
T 2cpg_A 12 SVLENLEKMAREMGLSKSAMISVA 35 (45)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHH
Confidence 345789999999999987765443
No 211
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=20.44 E-value=1.9e+02 Score=25.65 Aligned_cols=91 Identities=13% Similarity=0.217 Sum_probs=0.0
Q ss_pred HHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHHHcCCCeeeeecccccc-
Q 022904 55 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVV- 132 (290)
Q Consensus 55 ~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~- 132 (290)
.+-+.|+.+++++|. .+..+ +.++.+.++++.-.| -..|=+-++.+.+..+++ ...++++|+..+-+
T Consensus 219 ~~~~~L~~~~i~~iE-------qP~~~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~-~~~~d~v~~k~~~~G 287 (401)
T 3sbf_A 219 QFAKEVEQYKPYFIE-------DILPP---NQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA-NRRIDFIRCHVSQIG 287 (401)
T ss_dssp HHHHHHGGGCCSCEE-------CSSCT---TCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH-TTCCSEECCCGGGGT
T ss_pred HHHHHHHhcCCCEEE-------CCCCh---hHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh-cCCCCEEecCccccC
Q ss_pred ccChhhhHHHHHHHhCCeEEeccc
Q 022904 133 DMRPQQKMAELCQLTGVKLITYGT 156 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~gi~via~sp 156 (290)
--..-..+...|+.+|+.++.++.
T Consensus 288 Git~~~kia~~A~~~gi~~~~h~~ 311 (401)
T 3sbf_A 288 GITPALKLGHLCQNFGVRIAWHCA 311 (401)
T ss_dssp SHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC
No 212
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=20.41 E-value=3.7e+02 Score=22.33 Aligned_cols=27 Identities=7% Similarity=-0.065 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHHHHhhhCCCcccEEE
Q 022904 46 KMTSSIVRESIDVSRRRMDVPCLDMLQ 72 (290)
Q Consensus 46 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~ 72 (290)
..+.+.-.+-++..++.++.||||+=+
T Consensus 105 ~~~~~~y~~ll~~~~~~~~~dyIDVEl 131 (259)
T 3l9c_A 105 SLSNEDYLAIIRDIAALYQPDYIDFEY 131 (259)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEEH
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 345666666777777779999999853
No 213
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=20.39 E-value=3.6e+02 Score=24.26 Aligned_cols=81 Identities=5% Similarity=-0.032 Sum_probs=49.2
Q ss_pred cEEEEecCCCCCccHHHHHHHHHHHHH----cCCccEEEccCCCHHHHHHHHHcCCCeeeeeccccccc-cChhhhHHHH
Q 022904 69 DMLQFHWWDYSNPGYLDALNHLTDLKE----EGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAEL 143 (290)
Q Consensus 69 Dl~~lH~p~~~~~~~~~~~~~l~~L~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~ 143 (290)
+++++..|-...+ +..+.+|++ -+.--..|=+-++...+..+++. ..++++|+..+-+- -..-..+...
T Consensus 272 ~~~~iEeP~~~~d-----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~-~a~div~~d~~~~GGit~~~kia~l 345 (441)
T 4a35_A 272 KPLWIEEPTSPDD-----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA-KALQFLQIDSCRLGSVNENLSVLLM 345 (441)
T ss_dssp CCSEEECCSCTTC-----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT-TCCSEECCCTTTSSHHHHHHHHHHH
T ss_pred CccEEeCCCCccc-----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc-CCCCEEEECccccCCHHHHHHHHHH
Confidence 4455555543222 334444554 23334556677788888888873 34777777665432 1123568999
Q ss_pred HHHhCCeEEecc
Q 022904 144 CQLTGVKLITYG 155 (290)
Q Consensus 144 ~~~~gi~via~s 155 (290)
|+.+|+.+..++
T Consensus 346 A~~~gv~v~~H~ 357 (441)
T 4a35_A 346 AKKFEIPVCPHA 357 (441)
T ss_dssp HHHTTCCBCCCC
T ss_pred HHHcCCEEEEeC
Confidence 999999997654
No 214
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=20.37 E-value=3.2e+02 Score=23.12 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCC-ccEEEccCC----CHHHHHHHHHc----CC-CeeeeeccccccccCh--hhhHHHHHHHhC--
Q 022904 83 YLDALNHLTDLKEEGK-IKTVALTNF----DTERLRIILEN----GI-PVVSNQVQHSVVDMRP--QQKMAELCQLTG-- 148 (290)
Q Consensus 83 ~~~~~~~l~~L~~~G~-ir~iGvs~~----~~~~l~~~~~~----~~-~~~~~q~~~n~~~~~~--~~~~~~~~~~~g-- 148 (290)
....+..++.|++.|. |-.||+-.| .++.+...++. +. ++-+..+...- ... -..+++.|.++.
T Consensus 184 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi~~--~qa~~y~~~~~~~~~~~~v 261 (303)
T 1i1w_A 184 TQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVAG--ASSTDYVNVVNACLNVSSC 261 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTCCSEEEEEEEEETT--CCHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCCCCeEEEEeCCccc--hHHHHHHHHHHHHHhCCCc
Confidence 3567788888999997 889998543 34555555554 55 55555555442 222 236788888875
Q ss_pred CeEEecccc
Q 022904 149 VKLITYGTV 157 (290)
Q Consensus 149 i~via~spl 157 (290)
++|+-|+.-
T Consensus 262 ~git~Wg~~ 270 (303)
T 1i1w_A 262 VGITVWGVA 270 (303)
T ss_dssp EEEEESCSB
T ss_pred eEEEEEcCC
Confidence 666666644
No 215
>1a6f_A RNAse P protein, ribonuclease P protein; endonuclease, subunit; 2.60A {Bacillus subtilis} SCOP: d.14.1.2
Probab=20.25 E-value=1.9e+02 Score=20.86 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=41.9
Q ss_pred CCcEEEEeccCCCCCCCCHHHHHHHHHHHHhhhCC---CcccEEEEecCCCCCccHHHHHHHHHHHHHc
Q 022904 31 QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDV---PCLDMLQFHWWDYSNPGYLDALNHLTDLKEE 96 (290)
Q Consensus 31 R~~~~i~tK~~~~~~~~~~~~i~~~~~~SL~~Lg~---d~iDl~~lH~p~~~~~~~~~~~~~l~~L~~~ 96 (290)
|=.|.|+=|++. ...+..+++.+.++.+...- .- |++++-.+.....++.++...|..|.+.
T Consensus 45 RvG~sVsKKvg~---AV~RNRiKR~lRE~~R~~~~~l~~~-d~Vviar~~~~~~~~~~l~~~l~~ll~k 109 (119)
T 1a6f_A 45 RVGLSVSKKIGN---AVMRNRIKRLIRQAFLEEKERLKEK-DYIIIARKPASQLTYEETKKSLQHLFRK 109 (119)
T ss_dssp EEEEEECSTTCC---HHHHHHHHHHHHHHHHHHTTTBCSS-EEEEEECGGGTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEecccCc---chhHhHHHHHHHHHHHHhhccCCCC-CEEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 334555556653 23567788888888765432 24 9999998766555578888888887664
No 216
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=20.17 E-value=3.8e+02 Score=22.33 Aligned_cols=96 Identities=11% Similarity=0.107 Sum_probs=58.5
Q ss_pred HHHHHHHhhhCCCcccEEEEecCCCCCccHHHHHHH-HHHHHHcCCccEEEcc-------CCCHH-HHHHHHHcCCCeee
Q 022904 54 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNH-LTDLKEEGKIKTVALT-------NFDTE-RLRIILENGIPVVS 124 (290)
Q Consensus 54 ~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~-l~~L~~~G~ir~iGvs-------~~~~~-~l~~~~~~~~~~~~ 124 (290)
+.+++.|+-.| +|||.+=+-|-....-+ +++++. ++-+++.|---+.|=+ .-..+ -++.+. ...|++
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~-~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k--~lGf~~ 101 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVID-RDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECE--KLGFEA 101 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSC-HHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHH--HHTCCE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecC-HHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHH--HcCCCE
Confidence 45667777777 79999999986544432 344444 4444555555566643 11222 233332 345777
Q ss_pred eeccccccccChh--hhHHHHHHHhCCeEEe
Q 022904 125 NQVQHSVVDMRPQ--QKMAELCQLTGVKLIT 153 (290)
Q Consensus 125 ~q~~~n~~~~~~~--~~~~~~~~~~gi~via 153 (290)
+.+.-.-++...+ ..+++.+++.|..|+.
T Consensus 102 iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 102 VEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 7776666555543 3589999999998865
No 217
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.17 E-value=1e+02 Score=25.24 Aligned_cols=65 Identities=11% Similarity=0.073 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHc-CCccEEEccCCCHH--HHHHHHHcCCCeeeeeccccccccChhhhHHHHHHHhCCeEEe
Q 022904 83 YLDALNHLTDLKEE-GKIKTVALTNFDTE--RLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 153 (290)
Q Consensus 83 ~~~~~~~l~~L~~~-G~ir~iGvs~~~~~--~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~via 153 (290)
.-+++.+|..+++. ++|-.+|+.|.... .+..++ +.+ +.+..|+- ...-...+..+++.|+.++.
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll--~~~--i~~~~~~~--~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTF--NLR--LDQRSYIT--EEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHH--TCC--EEEEEESS--HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHh--CCc--eEEEEeCC--HHHHHHHHHHHHHCCCCEEE
Confidence 35889999998885 67888888887543 334433 443 33444443 22235789999999999876
No 218
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=20.05 E-value=77 Score=26.26 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=16.1
Q ss_pred hhHHHHHHHhCCeEEe-cccc
Q 022904 138 QKMAELCQLTGVKLIT-YGTV 157 (290)
Q Consensus 138 ~~~~~~~~~~gi~via-~spl 157 (290)
.++.+.++++|+.+.+ ++|.
T Consensus 50 ~~~~~~l~~~gl~i~~~~~~~ 70 (294)
T 3vni_A 50 NELKACAHGNGITLTVGHGPS 70 (294)
T ss_dssp HHHHHHHHHTTCEEEEEECCC
T ss_pred HHHHHHHHHcCCeEEEeecCC
Confidence 5688999999999987 5443
Done!