BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022909
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4I907|GLYR2_ARATH Glyoxylate/succinic semialdehyde reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLYR2 PE=1 SV=1
Length = 358
Score = 324 bits (830), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 184/225 (81%), Gaps = 1/225 (0%)
Query: 26 SFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPG-RIGFLGMGIMGT 84
S CP++P FR KPI+ +KP L+++V+SS + + DEL IGFLGMGIMG+
Sbjct: 20 SICPRIPLRFRPKPISPFLSKPQICLAYRVYSSLQSTTPSTRDELGTVSIGFLGMGIMGS 79
Query: 85 PMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDV 144
PMAQNL+KAGCDVTVWNRTKSKCDPL+ LGAKY+ SP+EV A+CD+TFAMLADPESA+DV
Sbjct: 80 PMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTFAMLADPESAIDV 139
Query: 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLI 204
ACGK+GA G+ GKGYVDVSTVD +S LI+ IK TGA FLEAPVSGSKKPAEDGQLI
Sbjct: 140 ACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVSGSKKPAEDGQLI 199
Query: 205 FLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
FL AGDK LY AP LDIMGKS+FYLG+VGNGAAMKLVVNMIMG
Sbjct: 200 FLTAGDKPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMG 244
>sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis
thaliana GN=GLYR1 PE=1 SV=1
Length = 289
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 121/177 (68%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
+GFLG+GIMG M+ NLLK G VTVWNRT SKCD L+ GA SP EV C T
Sbjct: 2 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTI 61
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
AML+DP +A+ V K G + GKGY+D+STVD +TS IN I G F+E PVS
Sbjct: 62 AMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVS 121
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
GSKKPAEDGQLI LAAGDK+L+ P D++GK FYLG VGNGA MKL+VNMIMG
Sbjct: 122 GSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMG 178
>sp|Q5ZLS7|GLYR1_CHICK Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 138/239 (57%), Gaps = 11/239 (4%)
Query: 11 HRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADEL 70
H FL S T +VC Q L S + ++ +T V+
Sbjct: 218 HHFLLSQTEKPAVCY-----------QAITKKLKVCEEETGSTSIQAADSTAVNGSITPT 266
Query: 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDV 130
+IGFLG+G+MG+ + NLLK G VTVWNRT KCD I GA+ +P EV ++CD+
Sbjct: 267 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDI 326
Query: 131 TFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 190
TFA ++DP++A D+ G G G+ PGK YVD+STVD DT + I + G FLEAP
Sbjct: 327 TFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAP 386
Query: 191 VSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
VSG+++ + DG L+ LAAGD+ LY + MGK+ F+LG+VGN A M L+VNM+ G
Sbjct: 387 VSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 445
>sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3
Length = 553
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 132/213 (61%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T V+ +IGFLG+G+MG+ + NLLK G VTVWNRT KCD I
Sbjct: 248 STSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI 307
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA+ +P EV ++CD+TFA ++DP++A D+ G G G+ PGK YVD+STVD DT
Sbjct: 308 QEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADT 367
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
+ I + G FLEAPVSG+++ + DG L+ LAAGD+ LY + MGK+ F+L
Sbjct: 368 VTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFL 427
Query: 232 GDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFV 264
G+VGN A M L+VNM+ G LTL V
Sbjct: 428 GEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHV 460
>sp|A4FUF0|GLYR1_BOVIN Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 128/198 (64%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T V+ +IGFLG+G+MG+ + NLLK G VTVWNRT KCD I
Sbjct: 248 STSIQAADSTAVNGSVTPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI 307
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA+ +P EV ++CD+TFA ++DP++A D+ G G G+ PGK YVD+STVD DT
Sbjct: 308 QEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADT 367
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
+ I + G FLEAPVSG+++ + DG L+ LAAGD+ LY + MGK+ F+L
Sbjct: 368 VTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFL 427
Query: 232 GDVGNGAAMKLVVNMIMG 249
G+VGN A M L+VNM+ G
Sbjct: 428 GEVGNAAKMMLIVNMVQG 445
>sp|Q5RKH0|GLYR1_RAT Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2
SV=1
Length = 552
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 138/239 (57%), Gaps = 11/239 (4%)
Query: 11 HRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADEL 70
H FL S T +VC Q L S + ++ +T V+
Sbjct: 217 HHFLLSQTEKPAVCY-----------QAITKKLKICEEETGSTSIQAADSTAVNGSITPT 265
Query: 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDV 130
+IGFLG+G+MG+ + NLLK G VTVWNRT KCD I GA+ +P EV ++CD+
Sbjct: 266 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDI 325
Query: 131 TFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 190
TFA ++DP++A D+ G G G+ PGK YVD+STVD DT + I + G FLEAP
Sbjct: 326 TFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAP 385
Query: 191 VSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
VSG+++ + DG L+ LAAGD+ LY + MGK+ F+LG+VGN A M L+VNM+ G
Sbjct: 386 VSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 444
>sp|Q5R7T2|GLYR1_PONAB Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2
Length = 553
Score = 180 bits (457), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 127/198 (64%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T V+ +IGFLG+G+MG+ + NLLK G VTVW+RT KCD I
Sbjct: 248 STSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWDRTAEKCDLFI 307
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA+ +P EV ++CD+TFA ++DP++A D+ G G G+ P K YVD+STVD DT
Sbjct: 308 QEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPRKCYVDMSTVDADT 367
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
+ I + G FLEAPVSG+++ + DG L+ LAAGD+ LY + MGK+ F+L
Sbjct: 368 VTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFL 427
Query: 232 GDVGNGAAMKLVVNMIMG 249
G+VGN A M L+VNM+ G
Sbjct: 428 GEVGNAAKMMLIVNMVQG 445
>sp|Q562D5|GLYR1_XENTR Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2
SV=1
Length = 534
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T ++ +IGFLG+G+MG+ + NLLK G VTVWNRT KCD I
Sbjct: 229 STSIQAADSTAINGNIIPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI 288
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA +P EV ++CD+TFA +ADP++A D+ G G G+ PGK YVD+STVD +T
Sbjct: 289 QEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDPET 348
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
+ I + G FLEAPVSG+++ + DG L+ LAAGD+ +Y + MGK+ F+L
Sbjct: 349 VAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYEDCSSCFLAMGKTSFFL 408
Query: 232 GDVGNGAAMKLVVNMIMG 249
G+VGN A M L++NM+ G
Sbjct: 409 GEVGNAARMMLILNMVQG 426
>sp|Q922P9|GLYR1_MOUSE Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1
Length = 546
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 6/198 (3%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T V+ +IGFLG+G+MG+ + NLLK G VTVWNRT K
Sbjct: 247 STSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK----- 301
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA+ +P EV ++CD+TFA ++DP++A D+ G G G+ PGK YVD+STVD DT
Sbjct: 302 -EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADT 360
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
+ I + G FLEAPVSG+++ + DG L+ LAAGD+ LY + MGK+ F+L
Sbjct: 361 VTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFL 420
Query: 232 GDVGNGAAMKLVVNMIMG 249
G+VGN A M L+VNM+ G
Sbjct: 421 GEVGNAAKMMLIVNMVQG 438
>sp|Q5RKN4|GLYR1_DANRE Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1
Length = 462
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 128/199 (64%), Gaps = 1/199 (0%)
Query: 52 SFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111
S + ++ +T ++ RIGFLG+G+MG+ + NLLK G VTVWNRT KCD I
Sbjct: 156 STSIQAADSTAINGSITPTDKRIGFLGLGLMGSGVVSNLLKMGHVVTVWNRTAEKCDLFI 215
Query: 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT 171
GA+ +P EV + CD+TF+ ++DP++A D+ G G G+ PGK YV++STVD +T
Sbjct: 216 QEGARLGRTPAEVVSMCDITFSCVSDPKAARDLVLGPSGVLQGIRPGKCYVEMSTVDPET 275
Query: 172 SKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231
++ I + G FLEAPVSGS++ + DG L+ +AAGD+S+Y + MGK+ F++
Sbjct: 276 ITELSQVITSRGGRFLEAPVSGSQQLSNDGMLVIVAAGDRSVYEDCSSCFQAMGKTSFFI 335
Query: 232 -GDVGNGAAMKLVVNMIMG 249
G+ GN A M L++NM+ G
Sbjct: 336 AGEAGNAARMMLILNMVQG 354
>sp|Q175F8|GLYR1_AEDAE Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti
GN=AAEL006684 PE=3 SV=1
Length = 559
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
Query: 33 SYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLK 92
S+ +P + P P ++ + Q+ + +A L + GFLG+GIMG M +NLL
Sbjct: 239 SHLLNRPTVARPATPEIDMTSVSNALQSRNI--QASNL--KFGFLGLGIMGCGMVKNLLN 294
Query: 93 AGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAA 152
+G V VWNRT +KC GA+ +P +V DVTF+ +ADP+ A ++ G G
Sbjct: 295 SGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVTFSCVADPQVAKELVFGNCGVM 354
Query: 153 SGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKS 212
S GKGYV+++ VD +TS I I A G +LEA + GSK AE+G LI LAAG++
Sbjct: 355 SANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAGERL 414
Query: 213 LYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
L+ + + ++ FY+GDVGN M LV+ MI G
Sbjct: 415 LFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISG 451
>sp|Q7Q161|GLYR1_ANOGA Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae
GN=AGAP009949 PE=3 SV=5
Length = 566
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
Query: 45 TKPLFP-LSFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRT 103
T+P P + S+ + +A +L + GFLG+G+MG + +NL+K+G V VWNR+
Sbjct: 255 TRPETPEIDMSSVSNAVQSRNIKASQL--KFGFLGLGVMGCGIVKNLIKSGHSVVVWNRS 312
Query: 104 KSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD 163
KC +GA+ +P +V DVT++ ++DP+ A D+ G G S GKGYV+
Sbjct: 313 AHKCRKFQEVGAEVADTPSDVVEMTDVTYSCVSDPQVAKDMVFGNCGVMSANLAGKGYVE 372
Query: 164 VSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDI 223
++ VD +TS IN I + G +LEA + GSK AE+G LI LA+GD+ L+ +
Sbjct: 373 MTGVDPETSNDINEAIISKGGRYLEAQIQGSKNQAEEGTLIILASGDRLLFEECQSCFEA 432
Query: 224 MGKSRFYLGDVGNGAAMKLVVNMIMG 249
+ ++ FYLGDVGN M L++ MI G
Sbjct: 433 ISRNSFYLGDVGNATKMNLILQMISG 458
>sp|Q29NG1|GLYR1_DROPS Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18401 PE=3 SV=2
Length = 612
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
Query: 65 AEADELPGRI--GFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPD 122
A+ D +P + GFLG+G+MG+ + ++L+ G V VWNRT KC P + GA+ + +P
Sbjct: 317 ADRDIVPSELTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPM 376
Query: 123 EVAASCDVTFAMLADPESAMDVACGKHGAASGMG-PGKGYVDVSTVDGDTSKLINGHIKA 181
+V + D+ F ++DP+ A D+ G G K YV++STVD DTS I IK
Sbjct: 377 DVVEAADIIFCCVSDPKGAKDLVFGNCGVLQLKDLRNKAYVEMSTVDPDTSLDIGEGIKQ 436
Query: 182 TGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMK 241
+LEA + GS++ A DG LI LA GD++++ + K+ F+LG+VGN +
Sbjct: 437 CNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSCFKTIAKNTFFLGNVGNACKVN 496
Query: 242 LVVNMIMGRS 251
L++ I S
Sbjct: 497 LILQTIQAVS 506
>sp|Q8T079|GLYR1_DROME Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster
GN=CG4747 PE=1 SV=1
Length = 602
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
Query: 38 KPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGR--IGFLGMGIMGTPMAQNLLKAGC 95
+P+ + P + +S + + A+ D +P GFLG+G+MG+ + ++L+ G
Sbjct: 286 RPVVTRPEAQVIDMSSR------SNTLADRDIVPSEQTFGFLGLGMMGSTIVKDLIYTGH 339
Query: 96 DVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGM 155
V VWNRT KC P GA+ + +P +V + DV F ++DP+ A D+ G G
Sbjct: 340 KVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQLK 399
Query: 156 G-PGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLY 214
K YV++ST+D DTS I IK +LEA + GS++ A +G LI LA GD+S++
Sbjct: 400 DLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVF 459
Query: 215 NTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
+ K+ F+LG++GN + L++ I+G S
Sbjct: 460 EECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVS 496
>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=garR PE=1 SV=1
Length = 294
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 103/189 (54%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
++GF+G+GIMG PM++NLLKAG + V +R +I+ GA+ + +A CDV
Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVII 61
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
ML + +VA G++G G PG +D+S++ S+ I+ +KA G L+APVS
Sbjct: 62 TMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVS 121
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSC 252
G + A DG L + GDK++++ L+ M S + G++G G KL +I+ +
Sbjct: 122 GGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNI 181
Query: 253 TFSYSFLTL 261
LTL
Sbjct: 182 AAMSEALTL 190
>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1
Length = 294
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 103/189 (54%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
++GF+G+GIMG PM++NLLKAG + V +R +I+ GA+ + +A CDV
Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVII 61
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
ML + +VA G++G G PG +D+S++ S+ I+ +KA G L+APVS
Sbjct: 62 TMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVS 121
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSC 252
G + A DG L + GDK++++ L+ M S + G++G G KL +I+ +
Sbjct: 122 GGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNI 181
Query: 253 TFSYSFLTL 261
LTL
Sbjct: 182 AAMSEALTL 190
>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2
Length = 291
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVT 131
++ F+G+G+MG PMA +L+K G DVTV+NRT +K + G K +P + A D+
Sbjct: 3 KVAFIGLGVMGFPMAGHLVKQGHDVTVYNRTGAKATQWVEQYGGKKADTPKDAAQGQDIV 62
Query: 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 191
F + + + V G+HG GM G VD +T D ++ I +I+ +FL+APV
Sbjct: 63 FTCVGNDDDLRQVVLGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPV 122
Query: 192 SGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV 243
SG + AE+G L + GD++ ++TV P++ + LG VG G K+V
Sbjct: 123 SGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMV 174
>sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Drosophila melanogaster GN=CG15093 PE=2 SV=2
Length = 324
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
IGF+G+G MG MA NL+KAG + V++ +K CD L + GA E+A + D
Sbjct: 30 NIGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVI 89
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
ML P +A+ A A G+ ++D ST+ D K + I A GA F++APVS
Sbjct: 90 TML--PNNAIVDASYDEMTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVS 147
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
G AE L F+ G ++ YN V +L+ MGK + G G G A KL NM++ S
Sbjct: 148 GGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAIS 206
>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus
GN=Hibadh PE=2 SV=1
Length = 335
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG PMA+NL+K G + +++ C G + SP EVA D
Sbjct: 41 VGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIIT 100
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML +A++V G +G + G +D ST+D SK + ++ GA F++APVSG
Sbjct: 101 MLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSG 160
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
A G L F+ G + + LL+ MG + Y G VG G + K+ NM++ S
Sbjct: 161 GVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAIS 218
>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=hibA PE=3 SV=1
Length = 321
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 96/178 (53%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG A NL+K G ++ V++ +K + L GAK SP EVA DV
Sbjct: 25 VGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVT 84
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML +V CG++G + PG +D ST+D T++ + K ++ L+ PVSG
Sbjct: 85 MLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSG 144
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
AE G L F+ G + +NT L+ MGK+ + GDVG G K+ N+++G S
Sbjct: 145 GTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGIS 202
>sp|O34969|YFJR_BACSU Uncharacterized oxidoreductase YfjR OS=Bacillus subtilis (strain
168) GN=yfjR PE=3 SV=2
Length = 286
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
+I +G+G MG P+A+N+L+AG ++TV+NRTK K + L++ GA+ +P A S D+
Sbjct: 2 KIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIVI 61
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
MLAD +S V G+ G G+ ++ +ST+ + S+ + G FL APV
Sbjct: 62 TMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVL 121
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGA-AMKLVVN-MIMGR 250
G A L + AG PLLD + + F +G+ A A K+ +N +++
Sbjct: 122 GRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSM 181
Query: 251 SCTFSYSFLTLE 262
S SFL +E
Sbjct: 182 LEALSESFLMME 193
>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=glxR PE=2 SV=1
Length = 292
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
++GF+G+GIMGTPMA NL +AG + V D L+SLGA + +V + D+ F
Sbjct: 2 KLGFIGLGIMGTPMAINLARAGHQLHVTT-IGPVADELLSLGAVSVETARQVTEASDIIF 60
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
M+ D +V G++G GK VD+S++ +K + G +L+APVS
Sbjct: 61 IMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVS 120
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM 248
G + A +G L + GD++++ V PL +++GK+ +G G+G K+ +I+
Sbjct: 121 GGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIV 176
>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hibadh PE=1 SV=3
Length = 335
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG PMA+NL+K G + +++ C G + SP +VA D
Sbjct: 41 VGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIIT 100
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML ++++V G +G + G +D ST+D SK + ++ GA F++APVSG
Sbjct: 101 MLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSG 160
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM 248
A G L F+ G ++ + LL MG + Y G VG+G + K+ NM++
Sbjct: 161 GVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLL 215
>sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial
OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1
Length = 334
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
+IG++G G+MG M +L+KAG VTV+NRT SK LI +GA SP+ VA DV F
Sbjct: 39 KIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQSDVVF 98
Query: 133 AMLADPESAMDVACG-KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF----- 186
++ P V K GA SG+ G VD++T + ++ I A ASF
Sbjct: 99 TIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEI-----AKAASFKNCFS 153
Query: 187 LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKL 242
++APVSG A++G+L A GD++ + PL +MGK F +G G G KL
Sbjct: 154 IDAPVSGGDLGAKNGKLSIFAGGDETTVKRLDPLFSLMGKVNF-MGTSGKGQFAKL 208
>sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens
GN=HIBADH PE=1 SV=2
Length = 336
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG PMA+NL+K G + +++ C G + SP +VA D
Sbjct: 42 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 101
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML +A++ G +G + G +D ST+D SK + ++ GA F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSG 161
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
A G L F+ G + + LL MG + Y G VG G A K+ NM++ S
Sbjct: 162 GVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAIS 219
>sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii
GN=HIBADH PE=2 SV=1
Length = 336
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG PMA+NL+K G + +++ C G + SP +VA D
Sbjct: 42 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 101
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML +A++ G +G + G +D ST+D SK + ++ GA F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSG 161
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
A G L F+ G + + LL MG + Y G VG G A K+ NM++ S
Sbjct: 162 GVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAIS 219
>sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus
GN=HIBADH PE=2 SV=1
Length = 336
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG PMA+NL+K G + +++ C + G + SP +VA D
Sbjct: 42 VGFIGVGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIIT 101
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML +A++ G +G + G +D ST+D SK + ++ GA F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSG 161
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
A G L F+ G + + LL MG + Y G VG G A K+ N+++ S
Sbjct: 162 GVGAARSGNLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAIS 219
>sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3
Length = 347
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
+GF+G+G MG M NL++AG VTV + + +G + +P EVA +V
Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVIT 99
Query: 134 MLADPESAMDVACGKHGAASGMGPGKG--YVDVSTVDGDTSKLI-----NGHIKATGASF 186
ML MDV G +G G + ++D ST+D T++ I N ++K ++
Sbjct: 100 MLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNW 159
Query: 187 -----LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMK 241
L+APVSG AE G L F+ G + Y P+L MG++ Y G GNG+A K
Sbjct: 160 EKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAK 219
Query: 242 LVVNMIMGRS 251
+ N+ M S
Sbjct: 220 ICNNLAMAVS 229
>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase YkwC OS=Bacillus subtilis (strain
168) GN=ykwC PE=3 SV=1
Length = 288
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
IGF+G+G+MG MA ++L G V V+ RTK K + ++ GA ++ + +++ DV
Sbjct: 5 IGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIIT 64
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
M+ P +V G +G G +D++T +K I K L+APVSG
Sbjct: 65 MVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSG 124
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKL-----VVNMIM 248
A++G L + G+K + P+ +MG++ Y G G+G K+ + ++
Sbjct: 125 GDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMI 184
Query: 249 GRSCTFSYSFLT-LEFVDFLINTVTMFLQSFSFGNL---QYDGNF 289
G + +Y+ + LE + L + T S+S NL GNF
Sbjct: 185 GVAEAMAYAQKSGLEPENVLKSITTGAAGSWSLSNLAPRMLQGNF 229
>sp|Q0QLF5|HMGD_EUBBA 2-(hydroxymethyl)glutarate dehydrogenase OS=Eubacterium barkeri
GN=Hgd PE=1 SV=1
Length = 301
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 98/177 (55%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
+IGF+G+G MG PMA NLLK G V ++ ++ +++ GA+ + +VAA+ D+ F
Sbjct: 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIF 65
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
L + V G G S G VD+S+V ++ + G +++APVS
Sbjct: 66 TSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVS 125
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
G K AE G L + ++++ + P+L ++GK +++GD G G A+K+V N+++G
Sbjct: 126 GGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLG 182
>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mmsB PE=2 SV=1
Length = 298
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I FLG+G MG PMA NLLKAG V V++ L+ GA+ S + +V +
Sbjct: 4 IAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVIS 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML + + G G + + +D ST+ +T++ + A G + L+APVSG
Sbjct: 64 MLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSG 123
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
A G L F+ G + P+L+ MG++ F+ GD G G K+ NM++G
Sbjct: 124 GVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLG 179
>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0229 PE=3 SV=1
Length = 290
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK--CDPLISLGAKYQPSPDEVAASCDV 130
+I G+G+MG+PMAQNL+K G +NRT + G K S AA+ D+
Sbjct: 5 KIAVFGLGVMGSPMAQNLVKNGYQTVGYNRTLERPSVQEAAKAGVKVVTSIAVAAANADI 64
Query: 131 TFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 190
+ D + + G G A P +D ST+ + + ++K G FL+AP
Sbjct: 65 ILTCVGDEKDVQQLILGSGGIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAP 124
Query: 191 VSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
V+G A +G L + GD S + P+L +G+ + G G+G A+KL ++ G
Sbjct: 125 VTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCG 183
>sp|P0A9V9|YIHU_SHIFL Uncharacterized oxidoreductase YihU OS=Shigella flexneri GN=yihU
PE=3 SV=1
Length = 298
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I F+G+G MG+PMA NLL+ G + V++ L+ GA +P + A +
Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIIT 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGASFLEAPVS 192
ML + + +V G++G G+ +D+ST+ T KLI ++A G S ++ PV
Sbjct: 64 MLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLI-ADMQAKGFSMMDVPVG 122
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVN 245
+ A G L+ LA G P+L MG G G G +KL+ N
Sbjct: 123 RTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINN 175
>sp|P0A9V8|YIHU_ECOLI Uncharacterized oxidoreductase YihU OS=Escherichia coli (strain
K12) GN=yihU PE=3 SV=1
Length = 298
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I F+G+G MG+PMA NLL+ G + V++ L+ GA +P + A +
Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIIT 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGASFLEAPVS 192
ML + + +V G++G G+ +D+ST+ T KLI ++A G S ++ PV
Sbjct: 64 MLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLI-ADMQAKGFSMMDVPVG 122
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVN 245
+ A G L+ LA G P+L MG G G G +KL+ N
Sbjct: 123 RTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINN 175
>sp|Q9C991|3HID2_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g71170 PE=2 SV=1
Length = 299
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 84 TPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMD 143
+ M ++L AG VTV+ R K L + G + SP E+ DV F ++ +
Sbjct: 26 SAMVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFTIVGNSNDVRS 85
Query: 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQL 203
+ G G SG+ PG VD+++ ++ I + ++APVSG A +G+L
Sbjct: 86 LLLGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKL 145
Query: 204 IFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKL 242
A GD + +AP++ MG RF +G G+G + K+
Sbjct: 146 TIFAGGDSEIVEWLAPVMKTMGIVRF-MGGAGSGQSCKI 183
>sp|Q949M8|3HID3_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial
OS=Arabidopsis thaliana GN=At1g71180 PE=2 SV=1
Length = 318
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 84 TPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMD 143
+ M +++ AG VTV+ R K L + GA+ SP E+A DV F ++ +
Sbjct: 47 SAMVSHIIAAGYSVTVYARDLRKTKDLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRS 106
Query: 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQL 203
+ G G SG+ PG VD+++ ++ I+ + ++APVSG A +G L
Sbjct: 107 LLLGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTL 166
Query: 204 IFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS 251
A GD + ++P++ +G + Y+G+ G+G + K + N I G S
Sbjct: 167 GIFAGGDSEIVEWLSPVMKNIG-TVTYMGEAGSGQSCK-IGNQIAGAS 212
>sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=B0250.5 PE=3 SV=1
Length = 299
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 75 GFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAM 134
GF+G+G MG MA+NL+K G + V++ K+ + G + P ++AA+ +
Sbjct: 5 GFIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITV 64
Query: 135 LADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGS 194
L V G+ G + PG +D ST+D S + A +++AP+SG
Sbjct: 65 LPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGG 124
Query: 195 KKPAEDGQLIFL-AAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 249
A+ L F+ AG+ + + +L +MGK+ LG VGNG A K+ NM++G
Sbjct: 125 VTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLG 180
>sp|Q9L7S0|YIHU_SALTY Uncharacterized oxidoreductase YihU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yihU PE=3 SV=1
Length = 298
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I F+G+G MG+PMA NLLK G ++V++ L+ GA+ SP + +
Sbjct: 4 IAFIGLGQMGSPMASNLLKQGHQLSVFDVNPDAVQRLVDKGAQPASSPAQATIGAEFVIT 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML + + V G+ G + +D+ST+ + + +++ G S ++ P+
Sbjct: 64 MLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQTDNLIADMQSKGFSMMDVPIGR 123
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVN 245
+ A G L+ LA G P+L MG G G G +KL+ N
Sbjct: 124 TSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINN 175
>sp|P63935|MMSB_MYCTU Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium
tuberculosis GN=mmsB PE=3 SV=1
Length = 294
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I FLG+G MG PM+ NL+ AG V ++ + + G S E A DV
Sbjct: 4 IAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVIT 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML E AA P ++D ST+ ++ ++ ++ G L+APVSG
Sbjct: 64 MLPTGEVVRRCYTDVLAAAR---PATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSG 120
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG-RSC 252
K A L F+ GD+S P+L+ M + G G G A K+ NM++ +
Sbjct: 121 GVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQI 180
Query: 253 TFSYSFLTLE 262
+ +F+ E
Sbjct: 181 AIAEAFVLAE 190
>sp|P63936|MMSB_MYCBO Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=mmsB PE=3 SV=1
Length = 294
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 74 IGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFA 133
I FLG+G MG PM+ NL+ AG V ++ + + G S E A DV
Sbjct: 4 IAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVIT 63
Query: 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193
ML E AA P ++D ST+ ++ ++ ++ G L+APVSG
Sbjct: 64 MLPTGEVVRRCYTDVLAAAR---PATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSG 120
Query: 194 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG-RSC 252
K A L F+ GD+S P+L+ M + G G G A K+ NM++ +
Sbjct: 121 GVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQI 180
Query: 253 TFSYSFLTLE 262
+ +F+ E
Sbjct: 181 AIAEAFVLAE 190
>sp|P71825|Y770_MYCTU Uncharacterized oxidoreductase Rv0770/MT0794 OS=Mycobacterium
tuberculosis GN=Rv0770 PE=3 SV=1
Length = 295
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 1/175 (0%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTF 132
R+G++G+G G PMA+ LL +TV++ P + GA S +VA D+
Sbjct: 9 RLGYIGLGNQGAPMAKRLLDWPGGLTVFDVRVEAMAPFVEGGATAAASVSDVA-EADIIS 67
Query: 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192
+ D V +G A+ PG ST+ T+ + +K G ++APVS
Sbjct: 68 ITVFDDAQVSSVITADNGLATHAKPGTIVAIHSTIADTTAVDLAEKLKPQGIHIVDAPVS 127
Query: 193 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI 247
G A G+L + D + + + G+ G G MKL NM+
Sbjct: 128 GGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNML 182
>sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ OS=Escherichia coli (strain
K12) GN=ygbJ PE=3 SV=1
Length = 302
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA-KYQPSPDEVAASCDVT 131
+G +G+G MG A + ++AG + + C L GA + A D
Sbjct: 8 HVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGACGVSDNAATFAEKLDAL 67
Query: 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 191
++ + V G+ G A + PG + ST+ ++ I + L+APV
Sbjct: 68 LVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPV 127
Query: 192 SGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLG-DVGNGAAMKLVVNMIMG 249
SG A +G++ +A+G + +AP+L+ + + +G + G G+ +K++ ++ G
Sbjct: 128 SGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAG 186
>sp|P44979|Y1010_HAEIN Uncharacterized oxidoreductase HI_1010 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1010
PE=3 SV=1
Length = 301
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 125 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 184
A D ++ + A V G++G A + G + ST+ +++I+ + G
Sbjct: 60 AHELDAVVILVVNAAQANAVLFGENGIAKKLKAGTAVMVSSTMAAQDAQIISQKLTELGL 119
Query: 185 SFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLG-DVGNGAAMKLV 243
L+APVSG A G++ +A+G K + + P+LD + +G ++G GA +K+V
Sbjct: 120 IMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIV 179
Query: 244 VNMIMG 249
++ G
Sbjct: 180 HQLLAG 185
>sp|P37754|6PGD9_ECOLX 6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia
coli GN=gnd PE=3 SV=1
Length = 468
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--GAKYQP--SPDEVAASC 128
+IG +GM +MG +A N+ G V+V+NR++ K + +I+ G K P + E S
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQEFVES- 63
Query: 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDG------DTSKLINGHIK 180
L P + + G S + K Y+D +DG DT + N +
Sbjct: 64 ------LETPRRILLMVKAGSGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRR-NRELS 116
Query: 181 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGD 233
A G +F+ VSG ++ A G I + G K Y VAP+L + Y+G
Sbjct: 117 AEGFNFIGTGVSGGEEGALKGPSI-MPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGA 175
Query: 234 VGNGAAMKLVVNMI 247
G G +K+V N I
Sbjct: 176 DGAGHYVKMVHNGI 189
>sp|P41576|6PGD_KLEPN 6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella
pneumoniae GN=gnd PE=3 SV=2
Length = 468
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS--LGAKYQP--SPDEVAASC 128
+IG +GM +MG +A N+ G V+V+NR++ K + +I+ G K P + E S
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENTGKKLVPYYTVQEFVES- 63
Query: 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDG------DTSKLINGHIK 180
L P + + G S + K Y+D +DG DT + N +
Sbjct: 64 ------LETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRR-NRELS 116
Query: 181 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGD 233
A G +F+ VSG ++ A G I + G K Y VAP+L + Y+G
Sbjct: 117 AEGFNFIGTGVSGGEEGALKGPSI-MPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGA 175
Query: 234 VGNGAAMKLVVNMI 247
G G +K+V N I
Sbjct: 176 DGAGHYVKMVHNGI 189
>sp|P37756|6PGD_SHIFL 6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella
flexneri GN=gnd PE=3 SV=1
Length = 468
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--GAKYQP--SPDEVAASC 128
+IG +GM +MG +A N+ G V+++NR++ K + +I+ G K P + E S
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLAPYYTVKEFVESL 64
Query: 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDG------DTSKLINGHIK 180
+ +L + G A + P Y+D +DG DT + N +
Sbjct: 65 ETPRRILL----MVKAGAGTDAAIDSLKP---YLDKGDIIIDGGNTFFQDTIRR-NRELS 116
Query: 181 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGD 233
A G +F+ VSG ++ A G I + G K Y VAP+L + Y+G
Sbjct: 117 AEGFNFIGTGVSGGEEGALKGPSI-MPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGA 175
Query: 234 VGNGAAMKLVVNMI 247
G G +K+V N I
Sbjct: 176 DGAGHYVKMVHNGI 189
>sp|P00350|6PGD_ECOLI 6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia
coli (strain K12) GN=gnd PE=1 SV=2
Length = 468
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--GAKYQP--SPDEVAASC 128
+IG +GM +MG +A N+ G V+++NR++ K + +I+ G K P + E S
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESL 64
Query: 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDG------DTSKLINGHIK 180
+ +L + G A + P Y+D +DG DT + N +
Sbjct: 65 ETPRRILL----MVKAGAGTDAAIDSLKP---YLDKGDIIIDGGNTFFQDTIRR-NRELS 116
Query: 181 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGD 233
A G +F+ VSG ++ A G I + G K Y VAP+L + Y+G
Sbjct: 117 AEGFNFIGTGVSGGEEGALKGPSI-MPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGA 175
Query: 234 VGNGAAMKLVVNMI 247
G G +K+V N I
Sbjct: 176 DGAGHYVKMVHNGI 189
>sp|P14062|6PGD_SALTY 6-phosphogluconate dehydrogenase, decarboxylating OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gnd
PE=3 SV=1
Length = 468
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--GAKYQP--SPDEVAASC 128
+IG +GM +MG +A N+ G V+V+NR++ K + +I+ G K P + E S
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKEFVESL 64
Query: 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG------DTSKLINGHIKAT 182
+ +L + G A + P D+ +DG DT + N + A
Sbjct: 65 ETPRRILL----MVKAGAGTDAAIDSLKPYLEKGDI-IIDGGNTFFQDTIRR-NRELSAE 118
Query: 183 GASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGDVG 235
G +F+ VSG ++ A G I + G K Y VAP+L + Y+G G
Sbjct: 119 GFNFIGTGVSGGEEGALKGPSI-MPGGQKDAYELVAPILTKIAAVAEDGEPCVTYIGADG 177
Query: 236 NGAAMKLVVNMI 247
G +K+V N I
Sbjct: 178 AGHYVKMVHNGI 189
>sp|Q94KU2|6PGD2_SPIOL 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic
OS=Spinacia oleracea GN=pgdP PE=1 SV=1
Length = 537
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS---------LGAKYQPSPDE 123
+IG +G+ +MG +A N+ + G ++V+NRT SK D + L Y P
Sbjct: 50 QIGLVGLAVMGQNLALNIAEKGFPISVYNRTASKVDETLDRAKSEGDLPLSGHYTPRDFV 109
Query: 124 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD--VSTVDGDTSKLINGHIKA 181
++ + +L S +D AS M PG +D +L + H +
Sbjct: 110 LSIERPRSIVILVKAGSPVDQTIAS--LASFMEPGDTIIDGGNEWYQNTERRLSDAH--S 165
Query: 182 TGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIM------GKSRFYLGDVG 235
G +L VSG ++ A G + + GD Y+ + +L + G Y+G+ G
Sbjct: 166 NGLLYLGMGVSGGEEGARFGPSL-MPGGDFQAYDNIQHILKKVAAQVDDGPCVTYIGEGG 224
Query: 236 NGAAMKLVVNMI 247
+G +K+V N I
Sbjct: 225 SGNFVKMVHNGI 236
>sp|O94574|YGDH_SCHPO Putative 2-hydroxyacid dehydrogenase C1773.17c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1773.17c PE=3 SV=3
Length = 340
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDV 130
R+G +GMG +G AQ +L GC++ NR + + + LGA + S DE+ +S DV
Sbjct: 161 RVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFV-SFDELLSSSDV 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,594,540
Number of Sequences: 539616
Number of extensions: 4554214
Number of successful extensions: 12662
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 12509
Number of HSP's gapped (non-prelim): 207
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)