Query 022909
Match_columns 290
No_of_seqs 424 out of 3001
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022909.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022909hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obb_A Probable 3-hydroxyisobu 100.0 1.5E-37 5E-42 273.8 22.4 216 71-286 3-219 (300)
2 4gbj_A 6-phosphogluconate dehy 100.0 4.2E-36 1.4E-40 264.4 17.8 216 70-287 4-221 (297)
3 3doj_A AT3G25530, dehydrogenas 100.0 1.5E-33 5.2E-38 250.0 23.2 215 71-285 21-236 (310)
4 3qha_A Putative oxidoreductase 100.0 1.5E-32 5.1E-37 242.1 22.3 213 70-286 14-233 (296)
5 3pdu_A 3-hydroxyisobutyrate de 100.0 1.2E-32 4E-37 241.7 20.9 215 72-286 2-217 (287)
6 3pef_A 6-phosphogluconate dehy 100.0 1.8E-32 6.2E-37 240.5 22.0 215 72-286 2-217 (287)
7 3g0o_A 3-hydroxyisobutyrate de 100.0 1.6E-32 5.5E-37 242.6 21.3 216 71-286 7-225 (303)
8 4dll_A 2-hydroxy-3-oxopropiona 100.0 2.1E-32 7.2E-37 243.6 21.2 214 71-286 31-245 (320)
9 2h78_A Hibadh, 3-hydroxyisobut 100.0 3.1E-31 1.1E-35 234.2 23.1 215 71-285 3-218 (302)
10 4e21_A 6-phosphogluconate dehy 100.0 2.2E-30 7.7E-35 233.1 21.1 211 71-286 22-281 (358)
11 3qsg_A NAD-binding phosphogluc 100.0 6.1E-30 2.1E-34 226.9 21.0 227 35-284 2-235 (312)
12 3l6d_A Putative oxidoreductase 100.0 3.1E-30 1.1E-34 228.3 17.9 209 71-284 9-222 (306)
13 4gwg_A 6-phosphogluconate dehy 100.0 2.2E-29 7.6E-34 233.8 19.4 211 71-285 4-234 (484)
14 1vpd_A Tartronate semialdehyde 100.0 4.5E-29 1.5E-33 219.9 20.3 215 71-285 5-220 (299)
15 3cky_A 2-hydroxymethyl glutara 100.0 1.3E-28 4.5E-33 217.1 21.0 215 71-285 4-219 (301)
16 4g2n_A D-isomer specific 2-hyd 100.0 1.1E-30 3.6E-35 233.1 7.2 176 2-196 119-294 (345)
17 4ezb_A Uncharacterized conserv 100.0 1.4E-28 4.9E-33 218.5 19.6 204 71-283 24-238 (317)
18 3hg7_A D-isomer specific 2-hyd 100.0 1.8E-30 6.2E-35 229.7 6.2 172 2-197 91-262 (324)
19 1yb4_A Tartronic semialdehyde 100.0 4.7E-28 1.6E-32 212.9 20.6 214 71-285 3-217 (295)
20 3jtm_A Formate dehydrogenase, 100.0 1.3E-30 4.4E-35 233.3 3.8 179 2-198 111-289 (351)
21 2uyy_A N-PAC protein; long-cha 100.0 1.7E-27 5.8E-32 211.5 23.8 216 71-286 30-246 (316)
22 2gf2_A Hibadh, 3-hydroxyisobut 100.0 1.3E-27 4.3E-32 210.3 20.4 213 72-284 1-214 (296)
23 3gg9_A D-3-phosphoglycerate de 100.0 1.2E-29 4E-34 227.3 7.2 177 2-197 100-283 (352)
24 4dgs_A Dehydrogenase; structur 100.0 1.7E-29 5.8E-34 224.9 7.2 173 2-197 118-290 (340)
25 3kb6_A D-lactate dehydrogenase 100.0 1.1E-29 3.8E-34 226.2 6.0 175 2-198 89-263 (334)
26 4e5n_A Thermostable phosphite 100.0 6.7E-30 2.3E-34 227.4 4.5 175 2-195 92-266 (330)
27 2p4q_A 6-phosphogluconate dehy 100.0 7.2E-28 2.5E-32 225.4 18.5 208 70-281 9-232 (497)
28 4hy3_A Phosphoglycerate oxidor 100.0 2.7E-29 9.2E-34 225.3 8.2 176 2-197 122-297 (365)
29 3evt_A Phosphoglycerate dehydr 100.0 1.1E-29 3.8E-34 225.0 5.4 173 2-197 86-259 (324)
30 2zyd_A 6-phosphogluconate dehy 100.0 1E-27 3.5E-32 223.7 18.0 204 71-278 15-234 (480)
31 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.1E-29 3.7E-34 224.4 3.9 170 5-197 92-261 (315)
32 2pi1_A D-lactate dehydrogenase 100.0 2E-29 6.7E-34 224.6 5.5 174 2-197 89-262 (334)
33 3gvx_A Glycerate dehydrogenase 100.0 4E-29 1.4E-33 218.0 6.1 168 3-197 74-241 (290)
34 3k5p_A D-3-phosphoglycerate de 99.9 2.4E-28 8.4E-33 221.8 10.1 172 2-197 105-276 (416)
35 2cvz_A Dehydrogenase, 3-hydrox 99.9 3.8E-27 1.3E-31 206.5 15.4 208 72-285 2-210 (289)
36 2yq5_A D-isomer specific 2-hyd 99.9 1E-28 3.5E-33 220.1 5.0 172 2-196 95-267 (343)
37 2j6i_A Formate dehydrogenase; 99.9 9.2E-29 3.1E-33 222.9 4.4 178 2-197 111-289 (364)
38 1wwk_A Phosphoglycerate dehydr 99.9 5E-28 1.7E-32 213.6 8.6 174 2-197 91-264 (307)
39 2nac_A NAD-dependent formate d 99.9 1.2E-28 4.3E-33 223.0 4.7 176 4-197 139-315 (393)
40 2g76_A 3-PGDH, D-3-phosphoglyc 99.9 4E-28 1.4E-32 216.1 6.9 173 2-196 114-286 (335)
41 1gdh_A D-glycerate dehydrogena 99.9 7.3E-28 2.5E-32 213.7 7.8 177 2-196 92-269 (320)
42 2iz1_A 6-phosphogluconate dehy 99.9 2.6E-26 8.9E-31 214.3 18.5 207 71-281 5-228 (474)
43 1sc6_A PGDH, D-3-phosphoglycer 99.9 2.5E-28 8.7E-33 222.4 3.6 170 3-196 95-264 (404)
44 1qp8_A Formate dehydrogenase; 99.9 1.1E-27 3.7E-32 210.9 6.2 164 2-192 74-237 (303)
45 1j4a_A D-LDH, D-lactate dehydr 99.9 1.3E-27 4.5E-32 213.2 6.6 171 3-196 96-266 (333)
46 1mx3_A CTBP1, C-terminal bindi 99.9 1.6E-27 5.6E-32 213.1 6.8 177 2-196 110-290 (347)
47 2pgd_A 6-phosphogluconate dehy 99.9 7.3E-26 2.5E-30 211.7 18.0 207 71-281 2-225 (482)
48 2gcg_A Glyoxylate reductase/hy 99.9 6.7E-27 2.3E-31 208.7 10.3 176 3-196 102-277 (330)
49 2ekl_A D-3-phosphoglycerate de 99.9 1.3E-27 4.5E-32 211.5 5.5 171 2-196 93-263 (313)
50 2cuk_A Glycerate dehydrogenase 99.9 4.9E-27 1.7E-31 207.5 7.8 170 2-196 90-259 (311)
51 1xdw_A NAD+-dependent (R)-2-hy 99.9 2.9E-27 1E-31 210.8 6.3 172 3-197 95-266 (331)
52 3ba1_A HPPR, hydroxyphenylpyru 99.9 2.5E-27 8.6E-32 210.9 5.6 171 2-196 112-282 (333)
53 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 2.3E-25 7.9E-30 207.9 17.7 204 72-279 2-224 (478)
54 1dxy_A D-2-hydroxyisocaproate 99.9 3.3E-27 1.1E-31 210.5 4.9 172 2-196 93-264 (333)
55 2w2k_A D-mandelate dehydrogena 99.9 5.3E-27 1.8E-31 210.5 4.7 177 2-196 105-287 (348)
56 2dbq_A Glyoxylate reductase; D 99.9 1.5E-26 5.3E-31 206.6 6.7 176 2-196 92-271 (334)
57 1ygy_A PGDH, D-3-phosphoglycer 99.9 1.3E-25 4.5E-30 211.9 10.3 204 2-227 91-307 (529)
58 3pid_A UDP-glucose 6-dehydroge 99.9 4.4E-24 1.5E-28 195.3 19.2 202 71-279 36-272 (432)
59 1i36_A Conserved hypothetical 99.9 2.2E-24 7.4E-29 186.7 16.4 197 72-283 1-201 (264)
60 4a7p_A UDP-glucose dehydrogena 99.9 6.6E-24 2.2E-28 195.7 19.9 206 71-279 8-255 (446)
61 2d0i_A Dehydrogenase; structur 99.9 4.1E-26 1.4E-30 203.5 3.5 174 3-196 90-266 (333)
62 2q3e_A UDP-glucose 6-dehydroge 99.9 3E-24 1E-28 200.2 16.0 207 71-280 5-261 (467)
63 3gg2_A Sugar dehydrogenase, UD 99.9 2.7E-23 9.2E-28 192.4 21.9 206 71-279 2-251 (450)
64 3g79_A NDP-N-acetyl-D-galactos 99.9 8E-24 2.7E-28 196.2 16.6 208 71-279 18-274 (478)
65 3ojo_A CAP5O; rossmann fold, c 99.9 6.2E-23 2.1E-27 188.0 17.9 209 71-279 11-254 (431)
66 3oet_A Erythronate-4-phosphate 99.9 1.5E-24 5.1E-29 194.8 3.8 153 2-197 86-242 (381)
67 2dpo_A L-gulonate 3-dehydrogen 99.9 1.3E-22 4.3E-27 179.8 13.9 204 71-289 6-238 (319)
68 2o3j_A UDP-glucose 6-dehydroge 99.9 4.9E-22 1.7E-26 185.6 16.9 206 71-279 9-266 (481)
69 1mv8_A GMD, GDP-mannose 6-dehy 99.9 3.7E-22 1.3E-26 184.6 15.6 203 72-278 1-248 (436)
70 3d1l_A Putative NADP oxidoredu 99.9 9.1E-23 3.1E-27 176.7 10.0 206 71-285 10-220 (266)
71 1zej_A HBD-9, 3-hydroxyacyl-CO 99.9 7.9E-23 2.7E-27 178.6 9.3 192 71-289 12-218 (293)
72 3gt0_A Pyrroline-5-carboxylate 99.9 4.7E-21 1.6E-25 164.2 18.0 205 71-286 2-215 (247)
73 3c24_A Putative oxidoreductase 99.9 3E-22 1E-26 175.3 10.7 204 71-283 11-236 (286)
74 3dtt_A NADP oxidoreductase; st 99.9 1.2E-22 4.2E-27 173.9 7.8 176 71-251 19-231 (245)
75 2y0c_A BCEC, UDP-glucose dehyd 99.9 7.7E-21 2.6E-25 177.2 20.5 204 71-278 8-260 (478)
76 1dlj_A UDP-glucose dehydrogena 99.9 5.1E-21 1.7E-25 175.1 18.5 201 72-279 1-243 (402)
77 3ggo_A Prephenate dehydrogenas 99.9 6.4E-21 2.2E-25 168.8 16.2 181 71-258 33-230 (314)
78 2g5c_A Prephenate dehydrogenas 99.9 7.3E-21 2.5E-25 165.9 15.4 202 72-283 2-220 (281)
79 2o4c_A Erythronate-4-phosphate 99.9 9.9E-23 3.4E-27 183.5 3.4 150 4-196 85-238 (380)
80 3k96_A Glycerol-3-phosphate de 99.9 3.3E-21 1.1E-25 173.4 12.4 200 71-274 29-264 (356)
81 2pv7_A T-protein [includes: ch 99.8 3.1E-20 1E-24 163.5 16.8 188 71-281 21-211 (298)
82 2ahr_A Putative pyrroline carb 99.8 7.5E-20 2.6E-24 157.6 18.7 200 71-284 3-206 (259)
83 4e12_A Diketoreductase; oxidor 99.8 5E-20 1.7E-24 160.9 15.9 196 71-280 4-227 (283)
84 3tri_A Pyrroline-5-carboxylate 99.8 2E-20 6.9E-25 163.1 13.1 204 71-285 3-216 (280)
85 2izz_A Pyrroline-5-carboxylate 99.8 1.4E-19 4.7E-24 161.0 16.9 204 71-285 22-238 (322)
86 2f1k_A Prephenate dehydrogenas 99.8 2.3E-19 7.8E-24 156.2 17.1 198 72-281 1-214 (279)
87 1yqg_A Pyrroline-5-carboxylate 99.8 1.1E-19 3.7E-24 156.9 13.9 196 72-283 1-204 (263)
88 3b1f_A Putative prephenate deh 99.8 4.9E-20 1.7E-24 161.4 11.8 204 71-281 6-226 (290)
89 3ktd_A Prephenate dehydrogenas 99.8 4.2E-19 1.4E-23 158.3 15.3 179 71-256 8-210 (341)
90 2ew2_A 2-dehydropantoate 2-red 99.8 6.1E-19 2.1E-23 155.8 14.2 202 71-277 3-251 (316)
91 1f0y_A HCDH, L-3-hydroxyacyl-C 99.8 3.8E-18 1.3E-22 150.3 17.5 193 71-279 15-240 (302)
92 3k6j_A Protein F01G10.3, confi 99.8 1.7E-17 6E-22 152.7 21.5 191 71-277 54-268 (460)
93 3vtf_A UDP-glucose 6-dehydroge 99.8 6.7E-18 2.3E-22 154.5 17.6 206 71-277 21-265 (444)
94 2rcy_A Pyrroline carboxylate r 99.8 4.4E-18 1.5E-22 146.7 14.6 192 71-284 4-207 (262)
95 3mog_A Probable 3-hydroxybutyr 99.8 5.2E-18 1.8E-22 158.0 14.9 193 71-280 5-225 (483)
96 1z82_A Glycerol-3-phosphate de 99.8 5.3E-18 1.8E-22 151.5 14.0 192 70-273 13-238 (335)
97 1evy_A Glycerol-3-phosphate de 99.8 1.3E-18 4.5E-23 157.3 8.5 196 73-272 17-256 (366)
98 1yj8_A Glycerol-3-phosphate de 99.8 6.4E-18 2.2E-22 153.3 13.1 198 71-272 21-274 (375)
99 1txg_A Glycerol-3-phosphate de 99.7 8.3E-18 2.8E-22 150.0 12.9 196 72-272 1-243 (335)
100 1ks9_A KPA reductase;, 2-dehyd 99.7 1.8E-18 6.1E-23 151.1 8.0 191 72-271 1-227 (291)
101 3ado_A Lambda-crystallin; L-gu 99.7 4.4E-18 1.5E-22 149.9 10.5 205 71-289 6-238 (319)
102 1x0v_A GPD-C, GPDH-C, glycerol 99.7 1.8E-17 6.2E-22 149.0 14.7 197 71-271 8-257 (354)
103 4huj_A Uncharacterized protein 99.7 3.1E-17 1.1E-21 138.0 12.8 162 71-240 23-205 (220)
104 2qyt_A 2-dehydropantoate 2-red 99.7 9.2E-18 3.1E-22 148.5 8.5 200 71-277 8-259 (317)
105 1jay_A Coenzyme F420H2:NADP+ o 99.7 4E-17 1.4E-21 136.2 11.3 172 72-251 1-199 (212)
106 2raf_A Putative dinucleotide-b 99.7 4E-17 1.4E-21 136.2 10.8 152 71-247 19-190 (209)
107 2yjz_A Metalloreductase steap4 99.5 8.6E-19 2.9E-23 145.4 0.0 162 71-243 19-192 (201)
108 1np3_A Ketol-acid reductoisome 99.7 7E-17 2.4E-21 144.4 11.8 202 71-282 16-242 (338)
109 2i76_A Hypothetical protein; N 99.7 2.4E-17 8.2E-22 143.4 7.8 183 71-269 2-190 (276)
110 1wdk_A Fatty oxidation complex 99.7 1.5E-16 5.2E-21 154.9 13.2 188 71-275 314-528 (715)
111 2vns_A Metalloreductase steap3 99.7 5.3E-16 1.8E-20 130.0 13.3 165 71-244 28-205 (215)
112 2wtb_A MFP2, fatty acid multif 99.7 6.2E-16 2.1E-20 150.7 14.7 189 71-276 312-527 (725)
113 1zcj_A Peroxisomal bifunctiona 99.6 2.7E-15 9.2E-20 139.4 16.3 189 71-276 37-250 (463)
114 1v8b_A Adenosylhomocysteinase; 99.6 4.2E-18 1.4E-22 157.1 -2.9 133 27-185 232-367 (479)
115 3d64_A Adenosylhomocysteinase; 99.6 4.6E-18 1.6E-22 157.4 -6.1 107 71-185 277-384 (494)
116 3dfu_A Uncharacterized protein 99.6 1.1E-14 3.8E-19 122.2 13.9 152 71-261 6-160 (232)
117 3d4o_A Dipicolinate synthase s 99.6 1.3E-15 4.3E-20 133.6 6.2 112 71-192 155-268 (293)
118 3fr7_A Putative ketol-acid red 99.6 1.3E-14 4.3E-19 132.6 12.2 203 71-280 53-286 (525)
119 3ghy_A Ketopantoate reductase 99.5 4.8E-14 1.6E-18 125.8 13.9 190 71-268 3-255 (335)
120 1bg6_A N-(1-D-carboxylethyl)-L 99.5 3.2E-14 1.1E-18 127.8 12.2 196 71-279 4-263 (359)
121 2rir_A Dipicolinate synthase, 99.5 3.3E-14 1.1E-18 125.0 8.9 111 71-191 157-269 (300)
122 3i83_A 2-dehydropantoate 2-red 99.5 2.8E-13 9.5E-18 120.1 15.0 188 71-268 2-236 (320)
123 3hn2_A 2-dehydropantoate 2-red 99.5 1.1E-12 3.9E-17 115.8 18.0 187 71-265 2-232 (312)
124 3hwr_A 2-dehydropantoate 2-red 99.5 4.8E-13 1.6E-17 118.5 15.0 184 71-267 19-245 (318)
125 3h9u_A Adenosylhomocysteinase; 99.4 1.5E-13 5E-18 124.8 8.7 100 71-177 211-311 (436)
126 3n58_A Adenosylhomocysteinase; 99.4 1E-13 3.6E-18 125.6 6.5 100 71-177 247-347 (464)
127 4fgw_A Glycerol-3-phosphate de 99.4 6E-13 2.1E-17 120.0 11.0 196 71-271 34-293 (391)
128 3zwc_A Peroxisomal bifunctiona 99.4 3.6E-12 1.2E-16 123.9 14.7 190 71-277 316-530 (742)
129 3gvp_A Adenosylhomocysteinase 99.3 1.2E-12 4.1E-17 118.5 6.6 93 71-170 220-312 (435)
130 3g17_A Similar to 2-dehydropan 99.3 1.5E-12 5.1E-17 114.0 5.4 195 71-276 2-227 (294)
131 2vhw_A Alanine dehydrogenase; 99.3 9.3E-13 3.2E-17 119.2 3.1 93 71-165 168-268 (377)
132 2i99_A MU-crystallin homolog; 99.2 7.6E-12 2.6E-16 110.4 6.2 110 71-189 135-249 (312)
133 3ce6_A Adenosylhomocysteinase; 99.2 2.5E-11 8.5E-16 112.7 9.1 100 71-177 274-374 (494)
134 2hk9_A Shikimate dehydrogenase 99.1 5.4E-11 1.9E-15 103.1 6.8 109 71-188 129-240 (275)
135 2d5c_A AROE, shikimate 5-dehyd 99.1 1.4E-10 4.7E-15 99.8 8.8 108 71-188 117-227 (263)
136 3ego_A Probable 2-dehydropanto 99.1 1.9E-11 6.5E-16 107.6 3.4 167 71-247 2-187 (307)
137 3p2y_A Alanine dehydrogenase/p 99.1 7.8E-11 2.7E-15 105.6 6.6 93 71-165 184-302 (381)
138 2dc1_A L-aspartate dehydrogena 99.1 4.1E-10 1.4E-14 95.3 9.7 110 72-196 1-116 (236)
139 1y81_A Conserved hypothetical 99.1 4.1E-10 1.4E-14 87.2 8.6 104 71-188 14-121 (138)
140 3oj0_A Glutr, glutamyl-tRNA re 99.1 1.4E-10 4.6E-15 90.6 5.6 88 71-166 21-111 (144)
141 4dio_A NAD(P) transhydrogenase 99.1 1.9E-10 6.4E-15 104.0 6.9 93 71-165 190-312 (405)
142 1x13_A NAD(P) transhydrogenase 99.0 3.9E-10 1.3E-14 102.7 6.7 97 71-170 172-299 (401)
143 1c1d_A L-phenylalanine dehydro 98.9 8.8E-10 3E-14 98.1 6.7 107 71-187 175-282 (355)
144 2ewd_A Lactate dehydrogenase,; 98.9 3E-09 1E-13 93.9 9.0 103 70-177 3-133 (317)
145 3uuw_A Putative oxidoreductase 98.9 5.4E-09 1.8E-13 91.8 10.3 111 71-188 6-122 (308)
146 3c7a_A Octopine dehydrogenase; 98.9 2.3E-09 8E-14 97.7 8.0 91 71-165 2-116 (404)
147 2duw_A Putative COA-binding pr 98.9 1.3E-09 4.4E-14 85.2 5.3 104 71-188 13-122 (145)
148 1l7d_A Nicotinamide nucleotide 98.9 3E-09 1E-13 96.4 8.3 93 71-165 172-294 (384)
149 2eez_A Alanine dehydrogenase; 98.9 1.8E-09 6.2E-14 97.3 6.9 94 71-166 166-267 (369)
150 1x7d_A Ornithine cyclodeaminas 98.9 6.9E-10 2.4E-14 99.2 3.9 112 71-189 129-249 (350)
151 3ic5_A Putative saccharopine d 98.9 4.3E-09 1.5E-13 78.4 7.4 100 71-178 5-112 (118)
152 3db2_A Putative NADPH-dependen 98.9 8.3E-09 2.9E-13 92.4 10.3 112 69-187 3-121 (354)
153 1lss_A TRK system potassium up 98.9 2.5E-08 8.4E-13 76.6 11.6 110 71-190 4-122 (140)
154 4hkt_A Inositol 2-dehydrogenas 98.9 1.1E-08 3.7E-13 90.7 10.8 110 71-188 3-119 (331)
155 3c85_A Putative glutathione-re 98.9 1.6E-08 5.6E-13 81.7 10.8 111 71-190 39-159 (183)
156 3q2i_A Dehydrogenase; rossmann 98.8 1.7E-08 5.8E-13 90.4 10.3 110 71-187 13-130 (354)
157 1leh_A Leucine dehydrogenase; 98.8 5.4E-09 1.9E-13 93.6 6.8 107 71-187 173-281 (364)
158 3fwz_A Inner membrane protein 98.8 3.4E-08 1.2E-12 76.4 10.5 108 71-187 7-122 (140)
159 3euw_A MYO-inositol dehydrogen 98.8 1.9E-08 6.6E-13 89.6 10.1 133 71-226 4-145 (344)
160 3don_A Shikimate dehydrogenase 98.8 4.3E-09 1.5E-13 90.9 5.6 110 71-188 117-231 (277)
161 3rc1_A Sugar 3-ketoreductase; 98.8 1.7E-08 5.8E-13 90.3 9.5 110 71-187 27-144 (350)
162 3e18_A Oxidoreductase; dehydro 98.8 3.1E-08 1E-12 88.9 11.2 109 71-186 5-119 (359)
163 2z2v_A Hypothetical protein PH 98.8 3.7E-09 1.3E-13 95.1 4.8 109 71-188 16-130 (365)
164 2egg_A AROE, shikimate 5-dehyd 98.8 8.2E-09 2.8E-13 90.2 6.8 111 71-188 141-261 (297)
165 3ond_A Adenosylhomocysteinase; 98.8 1.2E-08 3.9E-13 94.1 7.9 91 71-168 265-355 (488)
166 3ezy_A Dehydrogenase; structur 98.8 2.3E-08 8E-13 89.1 9.5 110 71-187 2-119 (344)
167 3e9m_A Oxidoreductase, GFO/IDH 98.7 3.7E-08 1.3E-12 87.3 9.9 111 71-188 5-123 (330)
168 1tlt_A Putative oxidoreductase 98.7 6E-08 2.1E-12 85.5 11.2 111 71-188 5-121 (319)
169 2glx_A 1,5-anhydro-D-fructose 98.7 6.7E-08 2.3E-12 85.6 11.4 111 72-189 1-119 (332)
170 3u62_A Shikimate dehydrogenase 98.7 6.2E-09 2.1E-13 88.8 4.5 108 71-188 109-220 (253)
171 1omo_A Alanine dehydrogenase; 98.7 8.7E-09 3E-13 91.1 5.4 108 71-189 125-240 (322)
172 3c1a_A Putative oxidoreductase 98.7 2.3E-08 7.7E-13 88.1 7.7 133 71-227 10-148 (315)
173 2ho3_A Oxidoreductase, GFO/IDH 98.7 7.2E-08 2.4E-12 85.2 11.0 110 72-188 2-118 (325)
174 3mz0_A Inositol 2-dehydrogenas 98.7 4.7E-08 1.6E-12 87.1 9.8 109 71-186 2-120 (344)
175 3phh_A Shikimate dehydrogenase 98.7 7.4E-09 2.5E-13 88.9 4.4 111 71-188 118-229 (269)
176 1xea_A Oxidoreductase, GFO/IDH 98.7 3.8E-08 1.3E-12 86.9 9.1 111 71-188 2-119 (323)
177 2g1u_A Hypothetical protein TM 98.7 1.1E-07 3.8E-12 74.8 10.7 93 71-167 19-120 (155)
178 3cea_A MYO-inositol 2-dehydrog 98.7 5.9E-08 2E-12 86.4 10.2 111 71-188 8-128 (346)
179 1hyh_A L-hicdh, L-2-hydroxyiso 98.7 6E-08 2E-12 85.2 9.7 67 72-139 2-81 (309)
180 3ohs_X Trans-1,2-dihydrobenzen 98.7 8E-08 2.7E-12 85.2 10.1 110 71-187 2-121 (334)
181 1ydw_A AX110P-like protein; st 98.7 1.4E-07 4.7E-12 84.7 11.1 111 71-188 6-127 (362)
182 3ec7_A Putative dehydrogenase; 98.7 9.5E-08 3.3E-12 85.6 10.0 109 71-186 23-141 (357)
183 2p2s_A Putative oxidoreductase 98.6 2.2E-07 7.5E-12 82.5 11.8 110 71-187 4-121 (336)
184 3evn_A Oxidoreductase, GFO/IDH 98.6 1.9E-07 6.4E-12 82.7 10.8 111 71-188 5-123 (329)
185 3hdj_A Probable ornithine cycl 98.6 6.3E-08 2.2E-12 85.1 7.5 106 71-188 121-236 (313)
186 3bio_A Oxidoreductase, GFO/IDH 98.6 1E-07 3.5E-12 83.6 8.6 105 71-186 9-120 (304)
187 1h6d_A Precursor form of gluco 98.6 2.3E-07 7.7E-12 85.4 10.5 111 71-188 83-206 (433)
188 1gtm_A Glutamate dehydrogenase 98.6 2.5E-08 8.4E-13 90.9 3.9 97 71-180 212-310 (419)
189 3upl_A Oxidoreductase; rossman 98.6 1.8E-07 6.1E-12 85.5 9.5 138 71-232 23-190 (446)
190 3m2t_A Probable dehydrogenase; 98.6 1.9E-07 6.3E-12 83.8 9.5 109 71-186 5-122 (359)
191 3llv_A Exopolyphosphatase-rela 98.6 2.4E-07 8.4E-12 71.4 8.9 70 71-140 6-83 (141)
192 3qy9_A DHPR, dihydrodipicolina 98.6 7.2E-07 2.4E-11 75.4 12.3 106 71-193 3-110 (243)
193 2hmt_A YUAA protein; RCK, KTN, 98.6 1.3E-07 4.3E-12 72.8 7.0 68 71-138 6-81 (144)
194 3f4l_A Putative oxidoreductase 98.5 1.6E-07 5.6E-12 83.6 8.3 110 71-187 2-120 (345)
195 1a5z_A L-lactate dehydrogenase 98.5 1.5E-07 5E-12 83.1 7.3 67 72-139 1-79 (319)
196 3ulk_A Ketol-acid reductoisome 98.5 3.2E-07 1.1E-11 82.7 9.5 195 71-275 37-254 (491)
197 1gpj_A Glutamyl-tRNA reductase 98.5 1.1E-07 3.9E-12 86.6 6.6 91 71-166 167-267 (404)
198 3kux_A Putative oxidoreductase 98.5 4.2E-07 1.4E-11 81.2 10.1 109 71-187 7-122 (352)
199 3e82_A Putative oxidoreductase 98.5 4.3E-07 1.5E-11 81.5 10.1 109 71-187 7-122 (364)
200 1pjc_A Protein (L-alanine dehy 98.5 8.3E-08 2.8E-12 86.2 5.0 94 71-166 167-268 (361)
201 4gqa_A NAD binding oxidoreduct 98.5 3.1E-07 1.1E-11 83.8 8.9 109 71-186 26-150 (412)
202 2hjr_A Malate dehydrogenase; m 98.5 4.7E-07 1.6E-11 80.2 9.7 65 71-136 14-91 (328)
203 1iuk_A Hypothetical protein TT 98.5 1.7E-07 5.8E-12 72.6 5.9 105 71-188 13-122 (140)
204 3o8q_A Shikimate 5-dehydrogena 98.5 1.3E-07 4.4E-12 81.9 5.7 110 71-188 126-243 (281)
205 1pzg_A LDH, lactate dehydrogen 98.5 3.2E-07 1.1E-11 81.4 8.0 65 71-135 9-86 (331)
206 3v5n_A Oxidoreductase; structu 98.5 8.2E-07 2.8E-11 81.2 10.9 110 71-187 37-165 (417)
207 3u3x_A Oxidoreductase; structu 98.5 7.8E-07 2.7E-11 79.8 10.5 109 71-186 26-142 (361)
208 1guz_A Malate dehydrogenase; o 98.5 6.8E-07 2.3E-11 78.5 9.7 66 72-138 1-80 (310)
209 1zh8_A Oxidoreductase; TM0312, 98.4 7E-07 2.4E-11 79.4 9.8 110 71-187 18-137 (340)
210 3moi_A Probable dehydrogenase; 98.4 7.4E-07 2.5E-11 80.7 10.1 111 71-188 2-120 (387)
211 4had_A Probable oxidoreductase 98.4 7.4E-07 2.5E-11 79.4 9.6 110 71-187 23-141 (350)
212 3dty_A Oxidoreductase, GFO/IDH 98.4 8.2E-07 2.8E-11 80.7 10.0 110 71-187 12-140 (398)
213 1f06_A MESO-diaminopimelate D- 98.4 5.3E-07 1.8E-11 79.6 8.4 103 71-183 3-110 (320)
214 1t2d_A LDH-P, L-lactate dehydr 98.4 7.8E-07 2.7E-11 78.5 9.4 65 71-136 4-81 (322)
215 2ixa_A Alpha-N-acetylgalactosa 98.4 1E-06 3.6E-11 81.1 10.6 110 71-187 20-146 (444)
216 3abi_A Putative uncharacterize 98.4 2.1E-07 7.3E-12 83.6 5.8 109 71-188 16-130 (365)
217 4fb5_A Probable oxidoreductase 98.4 1.2E-06 4.2E-11 78.9 10.8 109 71-186 25-148 (393)
218 2d59_A Hypothetical protein PH 98.4 6.8E-07 2.3E-11 69.5 7.8 104 71-188 22-129 (144)
219 4gmf_A Yersiniabactin biosynth 98.4 2.9E-07 9.8E-12 82.9 6.3 110 71-187 7-123 (372)
220 3fhl_A Putative oxidoreductase 98.4 1.1E-06 3.7E-11 78.8 9.7 108 71-187 5-120 (362)
221 3i23_A Oxidoreductase, GFO/IDH 98.4 9.4E-07 3.2E-11 78.8 9.1 108 71-187 2-120 (349)
222 3pwz_A Shikimate dehydrogenase 98.4 8.3E-07 2.9E-11 76.4 8.2 110 71-188 120-237 (272)
223 1ur5_A Malate dehydrogenase; o 98.4 1.4E-06 4.9E-11 76.4 9.7 67 71-138 2-81 (309)
224 1nyt_A Shikimate 5-dehydrogena 98.4 1.6E-06 5.6E-11 74.6 9.5 108 71-185 119-232 (271)
225 3jyo_A Quinate/shikimate dehyd 98.4 1.3E-06 4.5E-11 75.6 8.9 111 71-188 127-250 (283)
226 2v6b_A L-LDH, L-lactate dehydr 98.4 7.5E-07 2.6E-11 78.0 7.4 66 72-138 1-78 (304)
227 3gdo_A Uncharacterized oxidore 98.3 1.4E-06 4.9E-11 77.9 9.4 108 71-187 5-120 (358)
228 2nvw_A Galactose/lactose metab 98.3 1.2E-06 4.2E-11 81.4 9.1 109 71-186 39-169 (479)
229 2nu8_A Succinyl-COA ligase [AD 98.3 1.3E-05 4.4E-10 69.5 14.9 109 71-188 7-120 (288)
230 3btv_A Galactose/lactose metab 98.3 8.2E-07 2.8E-11 81.7 7.4 109 71-186 20-149 (438)
231 1lld_A L-lactate dehydrogenase 98.3 1.2E-06 4.2E-11 76.9 8.2 66 71-137 7-85 (319)
232 1npy_A Hypothetical shikimate 98.3 5.4E-07 1.8E-11 77.5 5.4 112 71-189 119-235 (271)
233 1p77_A Shikimate 5-dehydrogena 98.3 4.3E-07 1.5E-11 78.3 4.5 111 71-188 119-237 (272)
234 3o9z_A Lipopolysaccaride biosy 98.3 4.9E-06 1.7E-10 73.0 11.1 109 71-187 3-127 (312)
235 3oa2_A WBPB; oxidoreductase, s 98.3 5.1E-06 1.8E-10 73.1 11.2 110 71-188 3-129 (318)
236 4ew6_A D-galactose-1-dehydroge 98.3 3.7E-06 1.3E-10 74.4 10.2 105 71-188 25-137 (330)
237 2b0j_A 5,10-methenyltetrahydro 98.3 2.7E-05 9.2E-10 65.9 14.6 113 114-232 128-242 (358)
238 1u8x_X Maltose-6'-phosphate gl 98.3 1.3E-06 4.4E-11 80.8 6.9 67 71-137 28-112 (472)
239 1edz_A 5,10-methylenetetrahydr 98.2 7.1E-07 2.4E-11 78.1 4.6 89 71-167 177-277 (320)
240 3mtj_A Homoserine dehydrogenas 98.2 2.7E-06 9.2E-11 78.0 8.4 110 71-187 10-133 (444)
241 3l4b_C TRKA K+ channel protien 98.2 3E-06 1E-10 70.3 8.0 70 72-141 1-79 (218)
242 1oju_A MDH, malate dehydrogena 98.2 2.5E-06 8.5E-11 74.2 7.7 94 72-166 1-119 (294)
243 3gvi_A Malate dehydrogenase; N 98.2 3.7E-06 1.3E-10 74.1 8.7 66 71-137 7-85 (324)
244 1j5p_A Aspartate dehydrogenase 98.2 2.8E-06 9.5E-11 71.8 7.5 100 71-186 12-115 (253)
245 1y6j_A L-lactate dehydrogenase 98.2 4.6E-06 1.6E-10 73.4 9.2 69 71-139 7-86 (318)
246 3pqe_A L-LDH, L-lactate dehydr 98.2 3.3E-06 1.1E-10 74.5 8.2 96 71-166 5-123 (326)
247 1ff9_A Saccharopine reductase; 98.2 2E-06 6.9E-11 79.3 7.1 110 71-188 3-121 (450)
248 3ijp_A DHPR, dihydrodipicolina 98.2 4.2E-06 1.4E-10 72.2 8.5 115 70-193 20-146 (288)
249 3fbt_A Chorismate mutase and s 98.2 9.6E-07 3.3E-11 76.3 4.2 109 71-188 122-235 (282)
250 3ngx_A Bifunctional protein fo 98.2 4.1E-06 1.4E-10 71.4 8.0 74 71-167 150-224 (276)
251 1obb_A Maltase, alpha-glucosid 98.2 2.9E-06 1E-10 78.5 7.4 67 71-137 3-87 (480)
252 3tnl_A Shikimate dehydrogenase 98.2 6.2E-06 2.1E-10 72.3 9.2 112 71-188 154-284 (315)
253 2i6t_A Ubiquitin-conjugating e 98.2 4.6E-06 1.6E-10 72.9 8.3 91 71-166 14-126 (303)
254 3oqb_A Oxidoreductase; structu 98.2 6.3E-06 2.2E-10 74.3 9.4 110 71-187 6-138 (383)
255 2axq_A Saccharopine dehydrogen 98.2 3E-06 1E-10 78.5 7.4 110 71-188 23-141 (467)
256 1id1_A Putative potassium chan 98.2 4.5E-06 1.5E-10 65.2 7.3 71 71-141 3-85 (153)
257 3ip3_A Oxidoreductase, putativ 98.2 3.4E-06 1.2E-10 74.8 7.2 107 71-185 2-120 (337)
258 3nep_X Malate dehydrogenase; h 98.2 5.4E-06 1.8E-10 72.7 8.3 95 72-166 1-119 (314)
259 4h3v_A Oxidoreductase domain p 98.1 5E-06 1.7E-10 74.7 8.4 108 72-186 7-132 (390)
260 3d0o_A L-LDH 1, L-lactate dehy 98.1 7.6E-06 2.6E-10 72.0 9.3 95 71-165 6-123 (317)
261 1b0a_A Protein (fold bifunctio 98.1 6.8E-06 2.3E-10 70.5 8.6 74 71-167 159-233 (288)
262 1ldn_A L-lactate dehydrogenase 98.1 4.8E-06 1.7E-10 73.2 7.9 68 71-138 6-85 (316)
263 3p7m_A Malate dehydrogenase; p 98.1 7.6E-06 2.6E-10 72.1 9.0 66 71-137 5-83 (321)
264 1ez4_A Lactate dehydrogenase; 98.1 8.3E-06 2.8E-10 71.8 9.0 96 71-166 5-122 (318)
265 4a26_A Putative C-1-tetrahydro 98.1 5.2E-06 1.8E-10 71.7 7.4 73 71-166 165-240 (300)
266 4f3y_A DHPR, dihydrodipicolina 98.1 6.9E-06 2.4E-10 70.5 8.2 113 71-192 7-130 (272)
267 3l9w_A Glutathione-regulated p 98.1 4.1E-06 1.4E-10 76.3 7.2 89 71-163 4-100 (413)
268 1lc0_A Biliverdin reductase A; 98.1 7.7E-06 2.6E-10 71.2 8.3 108 71-190 7-123 (294)
269 3l07_A Bifunctional protein fo 98.1 7.9E-06 2.7E-10 70.1 8.1 73 71-166 161-234 (285)
270 3p2o_A Bifunctional protein fo 98.1 7.4E-06 2.5E-10 70.2 7.8 74 71-167 160-234 (285)
271 1a4i_A Methylenetetrahydrofola 98.1 8.8E-06 3E-10 70.3 8.3 75 71-168 165-240 (301)
272 2c2x_A Methylenetetrahydrofola 98.1 8.8E-06 3E-10 69.6 8.1 74 71-167 158-234 (281)
273 3fef_A Putative glucosidase LP 98.1 3.3E-06 1.1E-10 77.5 5.9 65 71-136 5-84 (450)
274 1oi7_A Succinyl-COA synthetase 98.1 8.7E-06 3E-10 70.6 7.9 109 71-188 7-120 (288)
275 3t4e_A Quinate/shikimate dehyd 98.1 1.8E-05 6E-10 69.3 9.7 112 71-188 148-278 (312)
276 3vku_A L-LDH, L-lactate dehydr 98.0 8.3E-06 2.8E-10 71.9 7.5 96 71-166 9-126 (326)
277 4a5o_A Bifunctional protein fo 98.0 1.1E-05 3.8E-10 69.1 7.9 75 71-168 161-236 (286)
278 1nvt_A Shikimate 5'-dehydrogen 98.0 3.5E-06 1.2E-10 73.1 4.4 110 71-187 128-250 (287)
279 2zqz_A L-LDH, L-lactate dehydr 98.0 1.1E-05 3.8E-10 71.2 7.7 68 71-138 9-87 (326)
280 1nvm_B Acetaldehyde dehydrogen 98.0 1E-05 3.4E-10 71.0 7.2 89 71-166 4-105 (312)
281 3tl2_A Malate dehydrogenase; c 98.0 1.5E-05 5.1E-10 69.9 8.2 66 71-137 8-88 (315)
282 3ldh_A Lactate dehydrogenase; 98.0 6.5E-06 2.2E-10 72.5 5.7 94 71-166 21-139 (330)
283 4ina_A Saccharopine dehydrogen 98.0 4.8E-06 1.7E-10 75.8 5.0 110 72-188 2-138 (405)
284 3do5_A HOM, homoserine dehydro 98.0 2.4E-05 8.3E-10 69.0 9.1 114 71-187 2-138 (327)
285 1s6y_A 6-phospho-beta-glucosid 98.0 8.4E-06 2.9E-10 75.0 6.3 68 71-138 7-94 (450)
286 3r6d_A NAD-dependent epimerase 98.0 1E-05 3.6E-10 66.8 6.2 91 71-168 5-110 (221)
287 2czc_A Glyceraldehyde-3-phosph 98.0 1.9E-05 6.5E-10 70.0 8.2 69 71-139 2-91 (334)
288 3c8m_A Homoserine dehydrogenas 97.9 1.7E-05 5.8E-10 70.1 7.0 111 71-187 6-144 (331)
289 1vl6_A Malate oxidoreductase; 97.9 4.3E-05 1.5E-09 68.3 9.4 93 71-170 192-299 (388)
290 1dih_A Dihydrodipicolinate red 97.9 1.9E-05 6.4E-10 67.9 6.4 90 71-167 5-105 (273)
291 3qvo_A NMRA family protein; st 97.9 6.4E-06 2.2E-10 69.0 3.3 91 71-168 23-127 (236)
292 3ius_A Uncharacterized conserv 97.9 1.8E-05 6.3E-10 67.9 6.3 66 70-137 4-73 (286)
293 2d4a_B Malate dehydrogenase; a 97.9 3E-05 1E-09 67.9 7.4 65 73-138 1-78 (308)
294 3ing_A Homoserine dehydrogenas 97.9 3.3E-05 1.1E-09 68.0 7.7 166 71-266 4-200 (325)
295 2yv1_A Succinyl-COA ligase [AD 97.8 7.1E-05 2.4E-09 65.0 9.5 108 71-188 13-126 (294)
296 2xxj_A L-LDH, L-lactate dehydr 97.8 3.6E-05 1.2E-09 67.4 7.3 95 72-166 1-117 (310)
297 2aef_A Calcium-gated potassium 97.8 3E-05 1E-09 64.9 6.4 88 71-164 9-105 (234)
298 2vt3_A REX, redox-sensing tran 97.8 9.6E-06 3.3E-10 67.2 3.1 68 71-138 85-156 (215)
299 4aj2_A L-lactate dehydrogenase 97.8 4.1E-05 1.4E-09 67.5 7.3 95 71-166 19-137 (331)
300 1xyg_A Putative N-acetyl-gamma 97.8 6.7E-05 2.3E-09 67.0 8.7 88 71-168 16-115 (359)
301 3e8x_A Putative NAD-dependent 97.8 7.1E-05 2.4E-09 62.4 8.3 67 71-137 21-94 (236)
302 1p9l_A Dihydrodipicolinate red 97.8 0.00024 8.1E-09 60.0 11.2 99 72-192 1-105 (245)
303 3tum_A Shikimate dehydrogenase 97.8 4.2E-05 1.4E-09 65.5 6.6 114 71-188 125-246 (269)
304 2ozp_A N-acetyl-gamma-glutamyl 97.7 6.8E-05 2.3E-09 66.7 8.0 88 71-167 4-101 (345)
305 1smk_A Malate dehydrogenase, g 97.7 7.7E-05 2.6E-09 65.8 8.3 68 71-138 8-87 (326)
306 2ejw_A HDH, homoserine dehydro 97.7 9.1E-06 3.1E-10 71.8 2.2 102 71-182 3-116 (332)
307 1mld_A Malate dehydrogenase; o 97.7 0.0001 3.6E-09 64.6 8.7 66 72-137 1-78 (314)
308 1jw9_B Molybdopterin biosynthe 97.7 1.4E-05 4.8E-10 67.8 2.5 34 71-104 31-65 (249)
309 3fi9_A Malate dehydrogenase; s 97.7 6.8E-05 2.3E-09 66.5 7.0 66 71-136 8-85 (343)
310 2qrj_A Saccharopine dehydrogen 97.7 2.2E-05 7.5E-10 70.5 3.8 83 71-166 214-301 (394)
311 2yv2_A Succinyl-COA synthetase 97.7 0.00019 6.5E-09 62.4 9.6 108 71-188 13-127 (297)
312 3ew7_A LMO0794 protein; Q8Y8U8 97.6 0.00029 9.9E-09 57.7 9.9 65 72-137 1-71 (221)
313 1cf2_P Protein (glyceraldehyde 97.6 6.1E-05 2.1E-09 66.7 6.0 68 72-139 2-90 (337)
314 3h2s_A Putative NADH-flavin re 97.6 0.00033 1.1E-08 57.5 10.1 66 72-137 1-72 (224)
315 3ff4_A Uncharacterized protein 97.6 7.4E-05 2.5E-09 56.1 5.4 103 71-188 4-110 (122)
316 2fp4_A Succinyl-COA ligase [GD 97.6 0.00016 5.5E-09 63.1 8.3 110 71-188 13-128 (305)
317 1b7g_O Protein (glyceraldehyde 97.6 0.00019 6.6E-09 63.6 8.3 68 72-139 2-89 (340)
318 3dhn_A NAD-dependent epimerase 97.6 6.3E-05 2.2E-09 62.1 4.7 67 71-137 4-77 (227)
319 2x0j_A Malate dehydrogenase; o 97.5 0.00012 4.2E-09 63.4 6.4 64 72-136 1-78 (294)
320 2yyy_A Glyceraldehyde-3-phosph 97.5 0.00036 1.2E-08 61.8 9.5 69 71-139 2-93 (343)
321 1ys4_A Aspartate-semialdehyde 97.5 0.0001 3.5E-09 65.7 5.8 90 71-167 8-116 (354)
322 3e48_A Putative nucleoside-dip 97.5 5.9E-05 2E-09 64.8 3.5 66 72-137 1-75 (289)
323 2nqt_A N-acetyl-gamma-glutamyl 97.5 0.00014 4.8E-09 64.7 6.0 91 71-170 9-115 (352)
324 1b8p_A Protein (malate dehydro 97.5 0.00022 7.4E-09 62.9 7.0 66 71-136 5-92 (329)
325 1hdo_A Biliverdin IX beta redu 97.4 0.00015 5.2E-09 58.6 5.4 67 71-137 3-77 (206)
326 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00035 1.2E-08 58.0 7.6 88 71-166 31-122 (223)
327 1ebf_A Homoserine dehydrogenas 97.4 0.00013 4.3E-09 65.2 5.0 83 71-163 4-113 (358)
328 2hjs_A USG-1 protein homolog; 97.4 7.5E-05 2.6E-09 66.2 3.3 91 69-167 4-101 (340)
329 3hhp_A Malate dehydrogenase; M 97.4 0.0007 2.4E-08 59.2 9.4 66 72-138 1-80 (312)
330 1zud_1 Adenylyltransferase THI 97.4 7E-05 2.4E-09 63.6 2.9 34 71-104 28-62 (251)
331 1u8f_O GAPDH, glyceraldehyde-3 97.4 0.00035 1.2E-08 61.7 7.3 32 71-102 3-36 (335)
332 3gpi_A NAD-dependent epimerase 97.4 0.00018 6.2E-09 61.7 5.3 66 71-136 3-72 (286)
333 2dt5_A AT-rich DNA-binding pro 97.4 4E-05 1.4E-09 63.2 1.0 67 71-138 80-151 (211)
334 3lk7_A UDP-N-acetylmuramoylala 97.4 0.00049 1.7E-08 63.4 8.4 114 71-184 9-139 (451)
335 2ep5_A 350AA long hypothetical 97.3 0.00025 8.4E-09 63.1 6.0 89 71-167 4-110 (350)
336 3two_A Mannitol dehydrogenase; 97.3 0.00034 1.1E-08 62.0 6.8 91 71-168 177-268 (348)
337 1o6z_A MDH, malate dehydrogena 97.3 0.0008 2.7E-08 58.6 9.0 66 72-137 1-80 (303)
338 4g65_A TRK system potassium up 97.3 0.00012 4.1E-09 67.6 3.9 68 71-138 3-79 (461)
339 1cdo_A Alcohol dehydrogenase; 97.3 0.0016 5.4E-08 58.3 11.1 89 71-166 193-295 (374)
340 2a9f_A Putative malic enzyme ( 97.3 0.00053 1.8E-08 61.3 7.8 93 71-170 188-294 (398)
341 1p0f_A NADP-dependent alcohol 97.3 0.0013 4.4E-08 58.8 10.4 89 71-166 192-294 (373)
342 2jhf_A Alcohol dehydrogenase E 97.3 0.0013 4.4E-08 58.8 10.4 88 71-165 192-293 (374)
343 1e3i_A Alcohol dehydrogenase, 97.3 0.0014 5E-08 58.5 10.6 89 71-166 196-298 (376)
344 3eag_A UDP-N-acetylmuramate:L- 97.3 0.00049 1.7E-08 60.5 7.3 64 71-134 4-73 (326)
345 1lnq_A MTHK channels, potassiu 97.3 0.00017 5.8E-09 63.7 4.3 86 71-162 115-208 (336)
346 2wm3_A NMRA-like family domain 97.3 0.00044 1.5E-08 59.6 6.7 66 71-136 5-81 (299)
347 1yqd_A Sinapyl alcohol dehydro 97.3 0.00022 7.6E-09 63.8 4.9 89 71-166 188-283 (366)
348 1xgk_A Nitrogen metabolite rep 97.3 0.00022 7.6E-09 63.4 4.9 66 71-136 5-82 (352)
349 3uko_A Alcohol dehydrogenase c 97.3 0.0013 4.3E-08 59.0 9.8 89 71-166 194-296 (378)
350 2d8a_A PH0655, probable L-thre 97.3 0.00043 1.5E-08 61.4 6.6 89 71-166 168-268 (348)
351 4dpk_A Malonyl-COA/succinyl-CO 97.2 0.0002 6.7E-09 63.9 4.2 89 70-167 6-112 (359)
352 4dpl_A Malonyl-COA/succinyl-CO 97.2 0.0002 6.7E-09 63.9 4.2 89 70-167 6-112 (359)
353 2dvm_A Malic enzyme, 439AA lon 97.2 0.00048 1.7E-08 62.8 6.7 107 71-187 186-315 (439)
354 3dqp_A Oxidoreductase YLBE; al 97.2 0.0002 6.8E-09 58.9 3.9 67 72-138 1-74 (219)
355 3dr3_A N-acetyl-gamma-glutamyl 97.2 0.00027 9.3E-09 62.4 4.9 91 71-168 4-109 (337)
356 2r6j_A Eugenol synthase 1; phe 97.2 0.00051 1.7E-08 59.8 6.5 68 70-137 10-89 (318)
357 2fzw_A Alcohol dehydrogenase c 97.2 0.0015 5E-08 58.4 9.7 89 71-166 191-293 (373)
358 1e3j_A NADP(H)-dependent ketos 97.2 0.0016 5.4E-08 57.8 9.6 89 71-166 169-272 (352)
359 4b4u_A Bifunctional protein fo 97.2 0.001 3.5E-08 57.3 7.9 73 71-166 179-252 (303)
360 1rjw_A ADH-HT, alcohol dehydro 97.2 0.00058 2E-08 60.3 6.6 89 71-166 165-262 (339)
361 3keo_A Redox-sensing transcrip 97.2 0.00013 4.4E-09 60.1 2.2 67 71-138 84-159 (212)
362 3m2p_A UDP-N-acetylglucosamine 97.2 0.00047 1.6E-08 59.8 6.0 64 71-136 2-71 (311)
363 3u95_A Glycoside hydrolase, fa 97.2 0.00012 4.1E-09 67.8 2.1 64 72-135 1-84 (477)
364 3h8v_A Ubiquitin-like modifier 97.2 0.00053 1.8E-08 59.3 6.0 122 71-193 36-172 (292)
365 2ph5_A Homospermidine synthase 97.2 0.00043 1.5E-08 63.5 5.6 99 71-191 13-115 (480)
366 1qyc_A Phenylcoumaran benzylic 97.2 0.00062 2.1E-08 58.7 6.5 67 71-137 4-87 (308)
367 2r00_A Aspartate-semialdehyde 97.2 0.00014 4.7E-09 64.4 2.3 89 71-167 3-98 (336)
368 2hcy_A Alcohol dehydrogenase 1 97.1 0.0017 5.7E-08 57.5 9.2 90 71-167 170-271 (347)
369 1pl8_A Human sorbitol dehydrog 97.1 0.0014 4.8E-08 58.2 8.5 89 71-166 172-274 (356)
370 1uuf_A YAHK, zinc-type alcohol 97.1 0.00054 1.9E-08 61.3 5.8 90 71-167 195-290 (369)
371 1lu9_A Methylene tetrahydromet 97.1 0.0005 1.7E-08 59.3 5.4 41 71-111 119-160 (287)
372 3pwk_A Aspartate-semialdehyde 97.1 0.00016 5.4E-09 64.6 2.2 89 71-167 2-97 (366)
373 3ip1_A Alcohol dehydrogenase, 97.1 0.002 6.9E-08 58.2 9.2 94 71-166 214-319 (404)
374 2cdc_A Glucose dehydrogenase g 97.0 0.0008 2.7E-08 60.1 6.2 90 71-167 181-280 (366)
375 1iz0_A Quinone oxidoreductase; 97.0 0.0009 3.1E-08 58.0 6.1 87 71-166 126-219 (302)
376 2x4g_A Nucleoside-diphosphate- 97.0 0.0011 3.9E-08 57.9 6.8 66 71-136 13-86 (342)
377 1piw_A Hypothetical zinc-type 97.0 0.00053 1.8E-08 61.1 4.5 89 71-166 180-277 (360)
378 3uog_A Alcohol dehydrogenase; 97.0 0.0012 4E-08 58.9 6.6 45 71-115 190-234 (363)
379 3s2e_A Zinc-containing alcohol 97.0 0.0012 4.1E-08 58.2 6.6 88 71-165 167-263 (340)
380 1vkn_A N-acetyl-gamma-glutamyl 97.0 0.0042 1.4E-07 55.0 10.0 89 71-168 13-110 (351)
381 2bka_A CC3, TAT-interacting pr 97.0 0.00086 3E-08 55.7 5.4 67 71-137 18-94 (242)
382 3slg_A PBGP3 protein; structur 97.0 0.00098 3.4E-08 59.2 6.0 66 71-136 24-100 (372)
383 3i6i_A Putative leucoanthocyan 96.9 0.0012 4.1E-08 58.2 6.4 67 71-137 10-93 (346)
384 2h6e_A ADH-4, D-arabinose 1-de 96.9 0.00085 2.9E-08 59.3 5.4 88 71-165 171-269 (344)
385 3e5r_O PP38, glyceraldehyde-3- 96.9 0.0009 3.1E-08 59.1 5.4 30 71-100 3-33 (337)
386 1qyd_A Pinoresinol-lariciresin 96.9 0.0009 3.1E-08 57.9 5.4 67 71-137 4-86 (313)
387 1pqw_A Polyketide synthase; ro 96.9 0.0015 5.1E-08 52.7 6.3 44 71-114 39-83 (198)
388 1y1p_A ARII, aldehyde reductas 96.9 0.0021 7.1E-08 56.1 7.7 66 71-136 11-92 (342)
389 4ej6_A Putative zinc-binding d 96.9 0.0018 6.3E-08 57.8 7.4 89 71-166 183-285 (370)
390 2ydy_A Methionine adenosyltran 96.9 0.0012 4.1E-08 57.2 5.9 65 71-136 2-69 (315)
391 1y7t_A Malate dehydrogenase; N 96.9 0.001 3.6E-08 58.4 5.5 66 71-136 4-89 (327)
392 3enk_A UDP-glucose 4-epimerase 96.9 0.0016 5.5E-08 57.0 6.7 68 69-136 3-87 (341)
393 3rui_A Ubiquitin-like modifier 96.9 0.00069 2.3E-08 59.7 4.0 34 71-104 34-68 (340)
394 1xq6_A Unknown protein; struct 96.9 0.0013 4.6E-08 54.7 5.7 65 71-136 4-78 (253)
395 2gas_A Isoflavone reductase; N 96.8 0.0011 3.7E-08 57.2 5.1 67 71-137 2-86 (307)
396 1f8f_A Benzyl alcohol dehydrog 96.8 0.0015 5.2E-08 58.3 6.2 89 71-166 191-290 (371)
397 3tfo_A Putative 3-oxoacyl-(acy 96.8 0.0016 5.5E-08 55.4 5.9 41 70-110 3-44 (264)
398 2cf5_A Atccad5, CAD, cinnamyl 96.8 0.0011 3.8E-08 58.9 4.9 89 71-166 181-276 (357)
399 3v8b_A Putative dehydrogenase, 96.8 0.0017 5.7E-08 55.8 5.6 41 71-111 28-69 (283)
400 3cps_A Glyceraldehyde 3-phosph 96.8 0.0028 9.5E-08 56.2 7.1 31 71-101 17-48 (354)
401 3c1o_A Eugenol synthase; pheny 96.8 0.00091 3.1E-08 58.2 3.9 67 71-137 4-87 (321)
402 2dkn_A 3-alpha-hydroxysteroid 96.7 0.00077 2.6E-08 56.4 3.3 36 72-107 2-38 (255)
403 2jl1_A Triphenylmethane reduct 96.7 0.0012 4.1E-08 56.3 4.5 65 72-136 1-75 (287)
404 1vj0_A Alcohol dehydrogenase, 96.7 0.0022 7.4E-08 57.5 6.4 45 71-115 196-241 (380)
405 2gn4_A FLAA1 protein, UDP-GLCN 96.7 0.0021 7E-08 56.8 6.1 66 71-136 21-100 (344)
406 2csu_A 457AA long hypothetical 96.7 0.0021 7E-08 59.3 6.2 107 71-188 8-126 (457)
407 3hsk_A Aspartate-semialdehyde 96.7 0.0014 4.7E-08 58.8 4.9 89 71-167 19-126 (381)
408 3q2o_A Phosphoribosylaminoimid 96.7 0.0027 9.1E-08 57.1 6.9 63 71-133 14-81 (389)
409 1v3u_A Leukotriene B4 12- hydr 96.7 0.0042 1.4E-07 54.5 7.9 88 71-166 146-245 (333)
410 3fpc_A NADP-dependent alcohol 96.7 0.002 6.8E-08 57.1 5.7 45 71-115 167-212 (352)
411 2dq4_A L-threonine 3-dehydroge 96.7 0.0022 7.6E-08 56.6 5.9 88 71-166 165-263 (343)
412 2g0t_A Conserved hypothetical 96.7 0.019 6.5E-07 50.7 11.8 157 71-232 22-205 (350)
413 4id9_A Short-chain dehydrogena 96.7 0.0014 4.7E-08 57.6 4.5 65 71-136 19-86 (347)
414 2x5o_A UDP-N-acetylmuramoylala 96.7 0.0059 2E-07 55.9 8.8 64 71-135 5-72 (439)
415 2rh8_A Anthocyanidin reductase 96.6 0.0057 2E-07 53.4 8.3 65 71-135 9-88 (338)
416 3aog_A Glutamate dehydrogenase 96.6 0.0061 2.1E-07 55.4 8.6 106 71-187 235-360 (440)
417 2c5a_A GDP-mannose-3', 5'-epim 96.6 0.0027 9.1E-08 56.7 6.2 66 71-136 29-102 (379)
418 2rir_A Dipicolinate synthase, 96.6 0.0012 4.2E-08 57.2 3.9 113 69-191 5-127 (300)
419 3sju_A Keto reductase; short-c 96.6 0.0026 8.7E-08 54.5 5.8 41 70-110 23-64 (279)
420 3f1l_A Uncharacterized oxidore 96.6 0.0076 2.6E-07 50.6 8.7 40 71-110 12-52 (252)
421 3orq_A N5-carboxyaminoimidazol 96.6 0.0043 1.5E-07 55.5 7.4 63 71-133 12-79 (377)
422 4b4o_A Epimerase family protei 96.6 0.0014 4.9E-08 56.3 3.9 58 72-135 1-59 (298)
423 5mdh_A Malate dehydrogenase; o 96.6 0.0038 1.3E-07 55.0 6.6 65 71-135 3-87 (333)
424 1yb1_A 17-beta-hydroxysteroid 96.6 0.01 3.5E-07 50.3 9.2 39 71-109 31-70 (272)
425 7mdh_A Protein (malate dehydro 96.6 0.0036 1.2E-07 55.9 6.4 66 71-136 32-117 (375)
426 3m6i_A L-arabinitol 4-dehydrog 96.6 0.014 4.6E-07 51.8 10.3 89 71-166 180-284 (363)
427 3ruf_A WBGU; rossmann fold, UD 96.5 0.0033 1.1E-07 55.2 6.1 66 71-136 25-109 (351)
428 4gsl_A Ubiquitin-like modifier 96.5 0.0018 6.1E-08 61.2 4.4 34 71-104 326-360 (615)
429 3aoe_E Glutamate dehydrogenase 96.5 0.022 7.4E-07 51.6 11.3 107 71-188 218-340 (419)
430 2tmg_A Protein (glutamate dehy 96.5 0.0097 3.3E-07 53.8 9.0 107 71-188 209-336 (415)
431 3tjr_A Short chain dehydrogena 96.5 0.0052 1.8E-07 53.2 7.0 41 70-110 30-71 (301)
432 1t4b_A Aspartate-semialdehyde 96.5 0.002 6.8E-08 57.6 4.4 88 72-167 2-100 (367)
433 1fjh_A 3alpha-hydroxysteroid d 96.5 0.0016 5.6E-08 54.7 3.7 36 72-107 2-38 (257)
434 4b7c_A Probable oxidoreductase 96.5 0.0053 1.8E-07 53.9 7.1 88 71-166 150-249 (336)
435 4gx0_A TRKA domain protein; me 96.5 0.0037 1.3E-07 59.0 6.5 69 72-140 349-421 (565)
436 3ged_A Short-chain dehydrogena 96.5 0.0053 1.8E-07 51.7 6.7 43 70-112 1-44 (247)
437 2c0c_A Zinc binding alcohol de 96.5 0.0033 1.1E-07 55.9 5.8 88 71-166 164-262 (362)
438 2pzm_A Putative nucleotide sug 96.5 0.0025 8.5E-08 55.7 4.8 66 71-136 20-97 (330)
439 2yfq_A Padgh, NAD-GDH, NAD-spe 96.5 0.0066 2.2E-07 55.1 7.7 106 71-187 212-342 (421)
440 1v9l_A Glutamate dehydrogenase 96.5 0.0062 2.1E-07 55.1 7.5 107 71-187 210-341 (421)
441 2j3h_A NADP-dependent oxidored 96.5 0.0031 1E-07 55.6 5.4 87 71-165 156-255 (345)
442 2vn8_A Reticulon-4-interacting 96.5 0.021 7E-07 50.9 10.9 90 71-167 184-282 (375)
443 3tz6_A Aspartate-semialdehyde 96.5 0.00091 3.1E-08 59.2 1.9 89 72-167 2-96 (344)
444 3lyl_A 3-oxoacyl-(acyl-carrier 96.5 0.0095 3.2E-07 49.6 8.2 40 71-110 5-45 (247)
445 3qwb_A Probable quinone oxidor 96.5 0.0045 1.5E-07 54.3 6.4 45 71-115 149-194 (334)
446 2zcu_A Uncharacterized oxidore 96.4 0.0028 9.4E-08 53.9 4.9 64 73-136 1-74 (286)
447 3rkr_A Short chain oxidoreduct 96.4 0.0042 1.4E-07 52.5 5.9 40 71-110 29-69 (262)
448 2yy7_A L-threonine dehydrogena 96.4 0.003 1E-07 54.4 5.1 66 71-136 2-77 (312)
449 4eye_A Probable oxidoreductase 96.4 0.0028 9.7E-08 55.9 5.0 87 71-165 160-257 (342)
450 2b5w_A Glucose dehydrogenase; 96.4 0.0035 1.2E-07 55.7 5.6 86 72-165 174-273 (357)
451 3l6e_A Oxidoreductase, short-c 96.4 0.012 4E-07 48.9 8.6 40 71-110 3-43 (235)
452 3fbg_A Putative arginate lyase 96.4 0.0033 1.1E-07 55.5 5.4 45 71-115 151-196 (346)
453 3o38_A Short chain dehydrogena 96.4 0.0043 1.5E-07 52.5 5.9 40 71-110 22-63 (266)
454 4fs3_A Enoyl-[acyl-carrier-pro 96.4 0.0087 3E-07 50.5 7.7 41 71-111 6-49 (256)
455 3r1i_A Short-chain type dehydr 96.4 0.0098 3.3E-07 50.7 8.1 41 71-111 32-73 (276)
456 3qiv_A Short-chain dehydrogena 96.4 0.0084 2.9E-07 50.1 7.5 40 71-110 9-49 (253)
457 3jyn_A Quinone oxidoreductase; 96.4 0.0043 1.5E-07 54.3 5.9 88 71-166 141-240 (325)
458 1qor_A Quinone oxidoreductase; 96.4 0.0047 1.6E-07 54.0 6.1 44 71-114 141-185 (327)
459 3pk0_A Short-chain dehydrogena 96.4 0.0046 1.6E-07 52.3 5.8 40 71-110 10-50 (262)
460 4a0s_A Octenoyl-COA reductase/ 96.4 0.011 3.9E-07 53.9 8.9 88 71-166 221-337 (447)
461 3ucx_A Short chain dehydrogena 96.4 0.0069 2.3E-07 51.2 6.9 40 71-110 11-51 (264)
462 1up7_A 6-phospho-beta-glucosid 96.4 0.012 4E-07 53.5 8.7 66 71-136 2-82 (417)
463 3gms_A Putative NADPH:quinone 96.4 0.006 2.1E-07 53.7 6.7 88 71-166 145-244 (340)
464 2rhc_B Actinorhodin polyketide 96.4 0.01 3.6E-07 50.5 8.1 39 71-109 22-61 (277)
465 3oh8_A Nucleoside-diphosphate 96.4 0.0038 1.3E-07 58.3 5.7 63 71-136 147-210 (516)
466 1iy8_A Levodione reductase; ox 96.4 0.0099 3.4E-07 50.3 7.8 39 71-109 13-52 (267)
467 3d7l_A LIN1944 protein; APC893 96.4 0.0035 1.2E-07 50.5 4.7 60 71-135 3-66 (202)
468 1jvb_A NAD(H)-dependent alcoho 96.3 0.0036 1.2E-07 55.3 5.1 89 71-166 171-272 (347)
469 1geg_A Acetoin reductase; SDR 96.3 0.0074 2.5E-07 50.7 6.8 39 71-109 2-41 (256)
470 2c29_D Dihydroflavonol 4-reduc 96.3 0.0099 3.4E-07 51.9 7.9 65 71-135 5-85 (337)
471 4e6p_A Probable sorbitol dehyd 96.3 0.01 3.4E-07 50.0 7.7 40 71-110 8-48 (259)
472 3k92_A NAD-GDH, NAD-specific g 96.3 0.01 3.4E-07 53.7 7.9 107 71-188 221-346 (424)
473 4fn4_A Short chain dehydrogena 96.3 0.0068 2.3E-07 51.3 6.5 84 71-166 7-93 (254)
474 3ftp_A 3-oxoacyl-[acyl-carrier 96.3 0.007 2.4E-07 51.5 6.6 40 71-110 28-68 (270)
475 1vlv_A Otcase, ornithine carba 96.3 0.015 5.1E-07 50.8 8.7 65 71-135 167-244 (325)
476 3h7a_A Short chain dehydrogena 96.3 0.0085 2.9E-07 50.3 7.0 41 71-111 7-48 (252)
477 2dph_A Formaldehyde dismutase; 96.3 0.0037 1.3E-07 56.3 5.0 46 71-116 186-232 (398)
478 3kkj_A Amine oxidase, flavin-c 96.3 0.0044 1.5E-07 51.1 5.1 34 71-104 2-35 (336)
479 3d6n_B Aspartate carbamoyltran 96.3 0.0079 2.7E-07 51.7 6.7 66 71-137 146-214 (291)
480 2i6u_A Otcase, ornithine carba 96.3 0.011 3.8E-07 51.3 7.6 65 71-135 148-225 (307)
481 3rd5_A Mypaa.01249.C; ssgcid, 96.3 0.0067 2.3E-07 52.1 6.3 42 71-112 16-58 (291)
482 1vm6_A DHPR, dihydrodipicolina 96.3 0.018 6.1E-07 47.5 8.4 98 71-193 12-111 (228)
483 2pk3_A GDP-6-deoxy-D-LYXO-4-he 96.3 0.0036 1.2E-07 54.2 4.6 65 71-136 12-83 (321)
484 3jv7_A ADH-A; dehydrogenase, n 96.2 0.0094 3.2E-07 52.5 7.3 88 71-165 172-270 (345)
485 3i1j_A Oxidoreductase, short c 96.2 0.01 3.4E-07 49.4 7.1 40 71-110 14-54 (247)
486 3ek2_A Enoyl-(acyl-carrier-pro 96.2 0.022 7.6E-07 47.9 9.4 86 71-167 14-102 (271)
487 4dup_A Quinone oxidoreductase; 96.2 0.0077 2.6E-07 53.3 6.7 87 71-165 168-265 (353)
488 3imf_A Short chain dehydrogena 96.2 0.0046 1.6E-07 52.1 5.0 41 71-111 6-47 (257)
489 2eih_A Alcohol dehydrogenase; 96.2 0.005 1.7E-07 54.3 5.4 44 71-114 167-211 (343)
490 3dii_A Short-chain dehydrogena 96.2 0.01 3.5E-07 49.7 7.1 43 70-112 1-44 (247)
491 4h7p_A Malate dehydrogenase; s 96.2 0.0061 2.1E-07 53.9 5.9 66 71-136 24-109 (345)
492 3gvc_A Oxidoreductase, probabl 96.2 0.0074 2.5E-07 51.6 6.3 40 71-110 29-69 (277)
493 1pjq_A CYSG, siroheme synthase 96.2 0.0072 2.5E-07 55.6 6.6 67 71-137 12-82 (457)
494 3rft_A Uronate dehydrogenase; 96.2 0.0018 6.3E-08 54.9 2.4 65 71-135 3-72 (267)
495 3grp_A 3-oxoacyl-(acyl carrier 96.2 0.015 5.2E-07 49.2 8.2 40 71-110 27-67 (266)
496 1oc2_A DTDP-glucose 4,6-dehydr 96.2 0.0066 2.2E-07 53.2 6.1 66 71-136 4-84 (348)
497 3nrc_A Enoyl-[acyl-carrier-pro 96.2 0.017 5.9E-07 49.2 8.5 34 71-104 26-62 (280)
498 4hv4_A UDP-N-acetylmuramate--L 96.2 0.0068 2.3E-07 56.4 6.4 114 71-184 22-149 (494)
499 1yxm_A Pecra, peroxisomal tran 96.2 0.0095 3.2E-07 51.3 6.9 39 71-109 18-57 (303)
500 2jah_A Clavulanic acid dehydro 96.2 0.0097 3.3E-07 49.8 6.8 40 71-110 7-47 (247)
No 1
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.5e-37 Score=273.76 Aligned_cols=216 Identities=27% Similarity=0.427 Sum_probs=206.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
++|||+||+|+||..+|++|.+.|++|++|||++++.+.+.+.|...++++.|+++++|+|++|+|.+++++.++.+...
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g 82 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999976566
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+++.+++|.++||+|+..+.+.+++.+.+.++|++|+++|+++++..+..+.++++++|+++++++++++|+.+|.++++
T Consensus 83 ~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~i~~ 162 (300)
T 3obb_A 83 LLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFH 162 (300)
T ss_dssp STTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEE
T ss_pred hhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCCCEEE
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
+++.|.+..+|+++|++...+ .+++|++.++++.|+|++.+.++++.+..+||.+.
T Consensus 163 ~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~ 219 (300)
T 3obb_A 163 AGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALE 219 (300)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHH
T ss_pred eCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHH
Confidence 999999999999999998887 99999999999999999999999999999998764
No 2
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=4.2e-36 Score=264.43 Aligned_cols=216 Identities=25% Similarity=0.401 Sum_probs=196.2
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
|.+||||||+|+||..+|++|.+.|++|++|||++++.+.+.+.|...++++.|+++++|+|++++|.+..++.++ ..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~--~~ 81 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELF--SM 81 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHS--CH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHH--HH
Confidence 4578999999999999999999999999999999999999888899999999999999999999999998888887 34
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 229 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 229 (290)
.+...++++.++||+|+..+.+.+++.+.+.+++++|+++|+++++..+..+.++++++++++++++++++|+.+|..++
T Consensus 82 ~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~ 161 (297)
T 4gbj_A 82 ELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVF 161 (297)
T ss_dssp HHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred HHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeE
Confidence 57788999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred EeCC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccccC
Q 022909 230 YLGD-VGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYDG 287 (290)
Q Consensus 230 ~~~~-~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~~ 287 (290)
++++ .|.+..+|+++|.+...+ .+++|++.++++.|+|++++.+++..+..+||.+..
T Consensus 162 ~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~ 221 (297)
T 4gbj_A 162 DFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQN 221 (297)
T ss_dssp ECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHH
T ss_pred EecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhc
Confidence 9985 799999999999998888 999999999999999999999999999999987653
No 3
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-33 Score=249.97 Aligned_cols=215 Identities=51% Similarity=0.789 Sum_probs=200.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+|+|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.|+..+++++++++++|+|++++|.+..++.++++.++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 100 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGG 100 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchh
Confidence 68999999999999999999999999999999999999888888988899999999999999999998888888755466
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++||+|+..+...+.+.+.+.+.+++|+++|+++++.....+++.++++++++.++.++++++.+|+++++
T Consensus 101 l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~~~~ 180 (310)
T 3doj_A 101 VLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFY 180 (310)
T ss_dssp GGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEE
T ss_pred hhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCCEEE
Confidence 77889999999999999999999999999999999999999998888778888889999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++.+.+.+.|++.|.+.+.+ .+++|++.++++.|+|++++.+++......|+.+
T Consensus 181 ~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~ 236 (310)
T 3doj_A 181 LGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMF 236 (310)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHH
T ss_pred eCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHH
Confidence 999999999999999998888 9999999999999999999999999988888754
No 4
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=1.5e-32 Score=242.06 Aligned_cols=213 Identities=25% Similarity=0.334 Sum_probs=197.0
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+.++|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.|+..+++++++++ +|+|++++|.+..++.++ +
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~---~ 89 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV---G 89 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH---H
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH---H
Confidence 357999999999999999999999999999999999999998889998999999999 999999999988888887 5
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 229 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 229 (290)
++.+.++++.++||+|+..+.+.+.+.+.+.+.+++|+++|+++++.....+.+.++++++++.++.++++++.+|++++
T Consensus 90 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~ 169 (296)
T 3qha_A 90 ELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVVI 169 (296)
T ss_dssp HHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEEE
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCeE
Confidence 67788999999999999999999999999998899999999999988777888889999999999999999999999999
Q ss_pred EeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHH------HHHHhhcCCCCcccc
Q 022909 230 YLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTV------TMFLQSFSFGNLQYD 286 (290)
Q Consensus 230 ~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~------~~~i~~~~~gs~~~~ 286 (290)
++++.+.+.++|++.|.+.+.+ .+++|++.++++.|+|++++ .+++.....+||...
T Consensus 170 ~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~ 233 (296)
T 3qha_A 170 HAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD 233 (296)
T ss_dssp EEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS
T ss_pred EcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh
Confidence 9999999999999999998888 99999999999999999999 999998777775543
No 5
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.2e-32 Score=241.70 Aligned_cols=215 Identities=50% Similarity=0.826 Sum_probs=199.5
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGA 151 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~ 151 (290)
++|+|||+|.||..+++.|...|++|++|||++++.+.+.+.|+...++++++++++|+|++++|.+..++.++++.+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 68999999999999999999999999999999999988888888888999999999999999999988888888554667
Q ss_pred cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEe
Q 022909 152 ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231 (290)
Q Consensus 152 ~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~ 231 (290)
.+.++++.++||+|++.+.+.+.+.+.+.+.+++|+++|+++++.....+.+.++++++++.++.++++++.+|++++++
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~ 161 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKKCLHL 161 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEEC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCEEEc
Confidence 78899999999999999999999999999889999999999988777788888899999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 232 GDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 232 ~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
++.+.+.+.|++.|.+.+.+ .+++|++.++++.|+|++++.+++..+..+||.+.
T Consensus 162 g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~ 217 (287)
T 3pdu_A 162 GEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFK 217 (287)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHH
Confidence 99999999999999998888 99999999999999999999999999988887553
No 6
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=1.8e-32 Score=240.48 Aligned_cols=215 Identities=51% Similarity=0.823 Sum_probs=199.7
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGA 151 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~ 151 (290)
|+|+|||+|.||..+++.|...|++|++|||++++.+.+.+.|+..+++++++++++|+|++++|.+..++.++++.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 78999999999999999999999999999999999998888889989999999999999999999888888888554667
Q ss_pred cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEe
Q 022909 152 ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231 (290)
Q Consensus 152 ~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~ 231 (290)
.+.+++++++||+|+..+.+.+.+.+.+++.+++|+++|+++++.....+.+.++++++++.++.++++++.+|.+++++
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~ 161 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHL 161 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEEC
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCeEEe
Confidence 78899999999999999999999999999999999999999988877778888899999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 232 GDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 232 ~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
++.+.+.++|++.|.+.+.+ .+++|++.++++.|+|++++.+++......||.+.
T Consensus 162 g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~ 217 (287)
T 3pef_A 162 GDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFA 217 (287)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHH
Confidence 99999999999999998887 99999999999999999999999999888887543
No 7
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.6e-32 Score=242.64 Aligned_cols=216 Identities=21% Similarity=0.367 Sum_probs=198.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc-CCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY-QPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~-~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
.++|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.|... .++++++++++|+|++++|.+..++.++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 57999999999999999999999999999999999988888888876 78899999999999999999888888875546
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 229 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 229 (290)
++.+.+++++++||+|+..+...+.+.+.+.+.+++|+++|+++++.....+.+.++++++++.++.++++|+.+|++++
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~ 166 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASNVY 166 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHEEEEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHCCCEE
Confidence 77888999999999999999999999999988899999999999988888888889999999999999999999999999
Q ss_pred EeCC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 230 YLGD-VGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 230 ~~~~-~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
++++ .+.+.+.|++.|.+.+.+ .+++|++.++++.|++++++.+++.....+||.+.
T Consensus 167 ~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~ 225 (303)
T 3g0o_A 167 RISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFE 225 (303)
T ss_dssp EEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHH
T ss_pred ECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHH
Confidence 9998 999999999999998887 99999999999999999999999999988887654
No 8
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=2.1e-32 Score=243.63 Aligned_cols=214 Identities=28% Similarity=0.445 Sum_probs=198.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.|+|+|||+|.||..+|+.|...|++|.+|||++++.+.+.+.|+..+++++++++++|+|++++|.+..++.++.+. +
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~-~ 109 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ-G 109 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT-C
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch-h
Confidence 589999999999999999999999999999999999888888888888999999999999999999988888888422 5
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++||+|++.+.+.+.+.+.+++.+++|+++|+++++.....+.+.+++++++++++.++++++.+ +.+++
T Consensus 110 ~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~~~~ 188 (320)
T 4dll_A 110 VAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GRATH 188 (320)
T ss_dssp HHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EEEEE
T ss_pred HHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CCEEE
Confidence 67789999999999999999999999999999999999999998877778888899999999999999999999 88999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
+++.+.+.+.|++.|.+.+.+ .+++|++.++++.|+|++++.+++......||.+.
T Consensus 189 ~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~ 245 (320)
T 4dll_A 189 VGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQ 245 (320)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHH
T ss_pred eCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHH
Confidence 999999999999999998888 99999999999999999999999999988887654
No 9
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=3.1e-31 Score=234.18 Aligned_cols=215 Identities=27% Similarity=0.425 Sum_probs=198.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|||+|.||..+++.|...|++|++|||++++.+.+.+.|+..+++++++++++|+|++++|.+..++.++.+.++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 82 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchh
Confidence 48999999999999999999999999999999999988888888988899999999999999999998889998843336
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++||+|+..+...+.+.+.+++.+++|+++|+++++.....+.++++++++++.++.++++++.+|+++++
T Consensus 83 ~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~~~~~ 162 (302)
T 2h78_A 83 LLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFH 162 (302)
T ss_dssp GGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEE
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCCCeEE
Confidence 78889999999999999999999999999988999999999998876667788888999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++.+.+.+.|+++|.+.+.+ ..++|++.++++.|++++++.+++..+..++|.+
T Consensus 163 ~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~ 218 (302)
T 2h78_A 163 AGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWAL 218 (302)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHH
Confidence 999999999999999998887 9999999999999999999999999998888754
No 10
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.97 E-value=2.2e-30 Score=233.05 Aligned_cols=211 Identities=19% Similarity=0.265 Sum_probs=194.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcC---CeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASC---DVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~a---Divv~~~p~~~~~~~~~~~ 147 (290)
+|+|||||+|.||..+|+.|...|++|.+|||++++.+.+.+.|+..+.+++++++++ |+|++++|.+ .++.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl-- 98 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML-- 98 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH--
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH--
Confidence 6899999999999999999999999999999999998888888888888999999999 9999999987 888888
Q ss_pred cccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhC--
Q 022909 148 KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMG-- 225 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G-- 225 (290)
+++.+.++++.+|||+|++.+.+..++.+.+.+++++|+++|+++++.....++ .+++++++++++.++++|+.+|
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~lg~~ 176 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPG 176 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHHSCC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHhccc
Confidence 457788999999999999999999999999999999999999999988877777 7889999999999999999999
Q ss_pred ------------------CcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHC----------------------
Q 022909 226 ------------------KSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFV---------------------- 264 (290)
Q Consensus 226 ------------------~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~---------------------- 264 (290)
..++++++.|+++.+|++.|.+.+.. .+++|++.++++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~ 256 (358)
T 4e21_A 177 IGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFY 256 (358)
T ss_dssp GGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGC
T ss_pred cccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhc
Confidence 57889999999999999999998887 9999999999998
Q ss_pred --CCCHHHHHHHHhhcC-CCCcccc
Q 022909 265 --DFLINTVTMFLQSFS-FGNLQYD 286 (290)
Q Consensus 265 --G~~~~~~~~~i~~~~-~gs~~~~ 286 (290)
|+|.+++.+..+... .+||.+.
T Consensus 257 ~~~~d~~~i~~~~~~g~~~~s~~l~ 281 (358)
T 4e21_A 257 RYDLDLADITEVWRRGSVISSWLLD 281 (358)
T ss_dssp CCCCCHHHHHHHHTTTSTTCBHHHH
T ss_pred ccCCCHHHHHHHHhCccHHHHHHHH
Confidence 899999999999876 6787664
No 11
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.97 E-value=6.1e-30 Score=226.90 Aligned_cols=227 Identities=20% Similarity=0.264 Sum_probs=178.9
Q ss_pred cccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCC--ccchhhHH
Q 022909 35 FRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRT--KSKCDPLI 111 (290)
Q Consensus 35 ~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~--~~~~~~~~ 111 (290)
++..+++.|..+..+... .. ...++|+|||+|.||..+|+.|...|+ +|++|||+ +++.+.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~-------------~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~ 67 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLY-FQ-------------SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE 67 (312)
T ss_dssp -------------------------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH
T ss_pred CcccccccccccCccccc-cc-------------CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH
Confidence 456678888766544321 00 115899999999999999999999999 99999997 46667777
Q ss_pred hCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHc--CCcEEeC
Q 022909 112 SLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT--GASFLEA 189 (290)
Q Consensus 112 ~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~--~~~~~~~ 189 (290)
+.|+..+++++++++++|+|++++|.+...+ ++ +++.+.+++++++||+|+..+...+++.+.+.++ +++|+++
T Consensus 68 ~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~---~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 68 ELGVSCKASVAEVAGECDVIFSLVTAQAALE-VA---QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp HTTCEECSCHHHHHHHCSEEEECSCTTTHHH-HH---HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HCCCEEeCCHHHHHhcCCEEEEecCchhHHH-HH---HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 7888888899999999999999999866554 44 4567789999999999999999999999999888 8999999
Q ss_pred ccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEeCC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCC
Q 022909 190 PVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFL 267 (290)
Q Consensus 190 p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~-~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~ 267 (290)
|++++++.. .+.+.++++++++ +.++++|+.+|++++++++ .+.+.++|++.|.+.+.+ .+++|++.++++.|+|
T Consensus 144 pv~g~~~~~-~g~l~i~vgg~~~--~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld 220 (312)
T 3qsg_A 144 AVMSAVKPH-GHRVPLVVDGDGA--RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLA 220 (312)
T ss_dssp EECSCSTTT-GGGSEEEEESTTH--HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred cccCCchhh-cCCEEEEecCChH--HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999976544 5677888888776 8999999999999999998 899999999999998887 9999999999999999
Q ss_pred HHHHHHHHhhcCCCCcc
Q 022909 268 INTVTMFLQSFSFGNLQ 284 (290)
Q Consensus 268 ~~~~~~~i~~~~~gs~~ 284 (290)
++ +.+.+..+. +++.
T Consensus 221 ~~-~~~~l~~~~-~~~~ 235 (312)
T 3qsg_A 221 DR-VLASLDASF-PEHH 235 (312)
T ss_dssp HH-HHHHHHHHS-GGGT
T ss_pred HH-HHHHHHhcC-Cchh
Confidence 95 667777766 4543
No 12
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.97 E-value=3.1e-30 Score=228.27 Aligned_cols=209 Identities=20% Similarity=0.285 Sum_probs=183.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.++|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.|+...++++++++++|+|++++|.+..++.++. ++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~--~~ 86 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG--MP 86 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT--ST
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc--cc
Confidence 6899999999999999999999999999999999988888888888888999999999999999999888898883 22
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
.+..+++++++||+|+..+...+++.+.+++.+++|+++|++++++....+.+.+++++++++++.++++|+.+|.++++
T Consensus 87 ~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~~~~ 166 (306)
T 3l6d_A 87 GVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGHTVF 166 (306)
T ss_dssp THHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSEEEE
T ss_pred chhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCCEEE
Confidence 24556899999999999999999999999999999999999998766666666788999999999999999999888999
Q ss_pred e--CC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcC--CCCcc
Q 022909 231 L--GD-VGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFS--FGNLQ 284 (290)
Q Consensus 231 ~--~~-~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~--~gs~~ 284 (290)
+ ++ .|.+..+| .++...+.+++|++.++++.|+|++++.+++.++. ..||.
T Consensus 167 ~~~g~~~g~g~~~k---~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~ 222 (306)
T 3l6d_A 167 LPWDEALAFATVLH---AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADA 222 (306)
T ss_dssp CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCccHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHH
Confidence 9 86 79999998 33333348999999999999999999999999875 45554
No 13
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.97 E-value=2.2e-29 Score=233.80 Aligned_cols=211 Identities=18% Similarity=0.259 Sum_probs=187.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC-----CccCCCHHHHhh---cCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG-----AKYQPSPDEVAA---SCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g-----~~~~~~~~~~~~---~aDivv~~~p~~~~~~ 142 (290)
.++|||||+|.||..+|+.|...|++|.+|||++++.+.+.+.+ +..+.+++++++ ++|+|++++|.++.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 57899999999999999999999999999999999888877642 234678999887 4999999999988888
Q ss_pred HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHH
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLD 222 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~ 222 (290)
.++ +++.+.++++.+|||+|++.+.+..++.+.+.+.+++|+++|+++++.....++ .+++++++++++.++++|+
T Consensus 84 ~vl---~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~pll~ 159 (484)
T 4gwg_A 84 DFI---EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKTIFQ 159 (484)
T ss_dssp HHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHH
T ss_pred HHH---HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHHHHH
Confidence 888 567888999999999999999999999999999999999999999888777777 7788999999999999999
Q ss_pred HhCCcE-------EEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHH-CCCCHHHHHHHHhhcC---CCCccc
Q 022909 223 IMGKSR-------FYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEF-VDFLINTVTMFLQSFS---FGNLQY 285 (290)
Q Consensus 223 ~~G~~~-------~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~-~G~~~~~~~~~i~~~~---~gs~~~ 285 (290)
.+|..+ +++++.|.++++|++.|.+.+.+ .+++|++.++++ .|+|++++.+++..+. ..||.+
T Consensus 160 ~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~ 234 (484)
T 4gwg_A 160 GIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLI 234 (484)
T ss_dssp HHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHH
T ss_pred HhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHH
Confidence 999877 78899999999999999998888 999999999999 9999999999985444 445443
No 14
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.97 E-value=4.5e-29 Score=219.92 Aligned_cols=215 Identities=31% Similarity=0.502 Sum_probs=190.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.|+|+|||+|.||..+++.|...|++|.+|||++++.+.+.+.|+....+++++++++|+|++++|.+..++.++...++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~ 84 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 84 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence 47999999999999999999999999999999998888888778888889999999999999999988888888733245
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++|+++++.+.+.+.+.+.+.+.+++|++.|++++++....+.+.++++++++.++.++++|+.+|..+++
T Consensus 85 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~ 164 (299)
T 1vpd_A 85 IIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVH 164 (299)
T ss_dssp HHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeEE
Confidence 56778999999999999988888999998888899999999887665555666777888899999999999999999999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++.+.+.+.|++.|.+...+ .++.|++.++++.|++++++.+++.++..+++.+
T Consensus 165 ~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~ 220 (299)
T 1vpd_A 165 TGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVL 220 (299)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHH
T ss_pred eCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHH
Confidence 999999999999999998887 9999999999999999999999999998887754
No 15
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.96 E-value=1.3e-28 Score=217.13 Aligned_cols=215 Identities=27% Similarity=0.472 Sum_probs=189.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.++|+|||+|.||..+++.|...|++|.+|||++++.+.+.+.|+...++++++++++|+|++++|.+.+++.++...++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 58999999999999999999999999999999998888777778888889999999999999999998888888832135
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++|+++++.+.+.+.+.+.+++.+++++++|+.+++.....+.+.++++++++.++.++++|+.+|..+++
T Consensus 84 l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~ 163 (301)
T 3cky_A 84 VLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIYH 163 (301)
T ss_dssp HHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEE
Confidence 66778999999999999988888999998888899999998776644445666667788889999999999999999988
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++.+.+.+.|++.|.+...+ ..+.|++.++++.|++++++.+++.++..+++.+
T Consensus 164 ~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~ 219 (301)
T 3cky_A 164 VGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAM 219 (301)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHH
T ss_pred eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHH
Confidence 999999999999999988877 9999999999999999999999999998887644
No 16
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.96 E-value=1.1e-30 Score=233.13 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=151.1
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|..+.......+.+. +++|||||+|+
T Consensus 119 ~V~n~pg~~~~--~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~-------------gktvGIIGlG~ 183 (345)
T 4g2n_A 119 KVLHTPDVLSD--ACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLT-------------GRRLGIFGMGR 183 (345)
T ss_dssp EEECCCSCCHH--HHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCT-------------TCEEEEESCSH
T ss_pred EEEECCcccch--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccC-------------CCEEEEEEeCh
Confidence 44555777777 8899999999999999999999999999985432222224555 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++.+.+.. .+...++++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 184 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li--~~~~l~~mk~gail 259 (345)
T 4g2n_A 184 IGRAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFL--DHDRIAKIPEGAVV 259 (345)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCB--CHHHHHHSCTTEEE
T ss_pred hHHHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHh--CHHHHhhCCCCcEE
Confidence 99999999999999999999987554322 267777799999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||++|+.++++++|.++|+++.+.....+++..||
T Consensus 260 IN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 260 INISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred EECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 99999999999999999999988877778888776
No 17
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.4e-28 Score=218.47 Aligned_cols=204 Identities=19% Similarity=0.262 Sum_probs=173.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC-CeEEEEeCCc-------cchhhHHhCCCccCC-CHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG-CDVTVWNRTK-------SKCDPLISLGAKYQP-SPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g-~~V~~~d~~~-------~~~~~~~~~g~~~~~-~~~~~~~~aDivv~~~p~~~~~ 141 (290)
.|+|||||+|.||..+|+.|...| ++|++|||++ +..+.+.+.|+ ++ +++++++++|+|++++|.+...
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 589999999999999999999999 9999999997 33444455666 56 7889999999999999987665
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHH
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll 221 (290)
+. + +++.+.+++++++||+|+..+.+.+.+.+.+++.+++|+++|+++++. ...+.+.++++++++ +.++++|
T Consensus 102 ~~-~---~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~-a~~g~l~i~vgg~~~--~~~~~ll 174 (317)
T 4ezb_A 102 AV-A---ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP-PYAEKVPILVAGRRA--VEVAERL 174 (317)
T ss_dssp HH-H---HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST-TTGGGSEEEEESTTH--HHHHHHH
T ss_pred HH-H---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch-hhcCCEEEEEeCChH--HHHHHHH
Confidence 54 3 456778999999999999999999999999998899999999998644 445567788888776 8999999
Q ss_pred HHhCCcEEEeCC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCc
Q 022909 222 DIMGKSRFYLGD-VGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNL 283 (290)
Q Consensus 222 ~~~G~~~~~~~~-~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~ 283 (290)
+.+|++++++++ .|.+.++|++.|.+.+.+ .+++|++.++++.|+|++.+..+.......+|
T Consensus 175 ~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~~~~~~ 238 (317)
T 4ezb_A 175 NALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETFPGLDW 238 (317)
T ss_dssp HTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCH
T ss_pred HHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCccccH
Confidence 999999999998 899999999999998888 99999999999999999766655555444444
No 18
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.96 E-value=1.8e-30 Score=229.72 Aligned_cols=172 Identities=15% Similarity=0.106 Sum_probs=147.2
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+.+.|+|... +++|++++++|++.|+++.+++.+++|.|..... +.+. +++|||||+|.
T Consensus 91 ~v~n~~g~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~-----~~l~-------------g~tvGIIGlG~ 150 (324)
T 3hg7_A 91 QLTNVRGIFGP--LMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPY-----QGLK-------------GRTLLILGTGS 150 (324)
T ss_dssp EEECCCSCCHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCC-----CCST-------------TCEEEEECCSH
T ss_pred EEEECCCcChH--HHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCC-----cccc-------------cceEEEEEECH
Confidence 45556777777 8889999999999999999999999999985422 3444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||+++..+.+.. .....++++++++||+|++|+|.+++|++++ +++.++.||+|+++
T Consensus 151 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~T~~li--~~~~l~~mk~gail 226 (324)
T 3hg7_A 151 IGQHIAHTGKHFGMKVLGVSRSGRERAGFDQ--VYQLPALNKMLAQADVIVSVLPATRETHHLF--TASRFEHCKPGAIL 226 (324)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCCTTCSE--EECGGGHHHHHHTCSEEEECCCCCSSSTTSB--CTTTTTCSCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEEEcCChHHhhhhhc--ccccCCHHHHHhhCCEEEEeCCCCHHHHHHh--HHHHHhcCCCCcEE
Confidence 9999999999999999999998754432211 2234689999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||+||+.++++++|.++|+++.+.....+++..||.
T Consensus 227 IN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl 262 (324)
T 3hg7_A 227 FNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPL 262 (324)
T ss_dssp EECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSC
T ss_pred EECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCC
Confidence 999999999999999999999888777778877664
No 19
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.96 E-value=4.7e-28 Score=212.93 Aligned_cols=214 Identities=30% Similarity=0.465 Sum_probs=188.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+|+|+|||+|.||+.+++.|...|++|.+|| ++++.+.+.+.|+....+++++++++|+|++++|.+.+++.++...++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 81 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHG 81 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchh
Confidence 4799999999999999999999999999999 988888887778887889999999999999999998888888832125
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+.+.+++++++|+++++.+.+.+.+.+.+.+.++++++.|+++++.....+.+.++++++++.++.++++|+.+|.++++
T Consensus 82 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~~~ 161 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITL 161 (295)
T ss_dssp STTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEE
Confidence 66788999999999999988888999988887888998998876544445666677888899999999999999999999
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++.+.+.+.|++.|.+...+ ..+.|+..++++.|++++++.+++..+..+++.+
T Consensus 162 ~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~ 217 (295)
T 1yb4_A 162 VGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRIL 217 (295)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHH
T ss_pred eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHH
Confidence 999999999999999988777 9999999999999999999999999998887654
No 20
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.96 E-value=1.3e-30 Score=233.26 Aligned_cols=179 Identities=13% Similarity=0.108 Sum_probs=153.7
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|...... ...+.+. +++|||||+|+
T Consensus 111 ~V~n~~g~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~-~~~~~l~-------------gktvGIIG~G~ 174 (351)
T 3jtm_A 111 TVAEVTGSNVV--SVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIA-YRAYDLE-------------GKTIGTVGAGR 174 (351)
T ss_dssp EEEECTTTTHH--HHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHH-TTCCCST-------------TCEEEEECCSH
T ss_pred eEEECCCcCch--HHHHHHHHHHHHHhhCcHHHHHHHHcCCCcccccc-CCccccc-------------CCEEeEEEeCH
Confidence 45556777766 88999999999999999999999999999742110 0113344 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++...+...+.|+...+++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 175 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li--~~~~l~~mk~gail 252 (351)
T 3jtm_A 175 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMF--NKELIGKLKKGVLI 252 (351)
T ss_dssp HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCB--SHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhh--cHHHHhcCCCCCEE
Confidence 9999999999999999999999866666666778878899999999999999999999999999 78889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPA 198 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~ 198 (290)
||++|+.++++++|.++|+++++.....+++..||..
T Consensus 253 IN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 289 (351)
T 3jtm_A 253 VNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAP 289 (351)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCC
T ss_pred EECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCC
Confidence 9999999999999999999998887777888776643
No 21
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.96 E-value=1.7e-27 Score=211.52 Aligned_cols=216 Identities=43% Similarity=0.737 Sum_probs=190.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.++|+|||+|.||..+++.|...|++|.+|||++++.+.+.+.|+....+.+++++++|+|++++|.+..++.++.....
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 47899999999999999999999999999999999888888888887888999999999999999988888888733223
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 230 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 230 (290)
+++.+++++++|+++++.+...+.+.+.+...+..+++.|+++.+.....+.+.++++++++.++.++++|+.+|..+++
T Consensus 110 ~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~ 189 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFF 189 (316)
T ss_dssp GGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCCEEE
Confidence 45778999999999999988888899988877889999999887666666777777778888999999999999999989
Q ss_pred eCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 231 LGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 231 ~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
+++.+.+.+.|++.|.+.+.+ ..+.|++.++++.|++++++.+++.++..+++.+.
T Consensus 190 ~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~ 246 (316)
T 2uyy_A 190 LGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLD 246 (316)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHH
T ss_pred eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHH
Confidence 989999999999999988777 99999999999999999999999999998887653
No 22
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.96 E-value=1.3e-27 Score=210.31 Aligned_cols=213 Identities=29% Similarity=0.445 Sum_probs=184.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGA 151 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~ 151 (290)
|+|+|||+|.||..+++.|...|++|.+|||++++.+.+.+.|+...++++++++++|+|++++|.+..++.++...+.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 47999999999999999999999999999999988888887788888899999999999999999988888888332235
Q ss_pred cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEe
Q 022909 152 ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231 (290)
Q Consensus 152 ~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~ 231 (290)
++.+++++++|++++..+.+.+.+.+.+.+.+..++++|+++++.....+.+.++.+++++.++.++++|+.+|.+++++
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~ 160 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYC 160 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEEEE
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeEEe
Confidence 56788999999998888888888888887778889999988765444556667788888999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCcc
Q 022909 232 GDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQ 284 (290)
Q Consensus 232 ~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~ 284 (290)
++.+.+.+.|++.|.+...+ ..+.|++.++++.|++++++.+++....+.+|.
T Consensus 161 ~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~ 214 (296)
T 2gf2_A 161 GAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWS 214 (296)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHH
Confidence 99999999999999887777 899999999999999999999999986554443
No 23
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.96 E-value=1.2e-29 Score=227.31 Aligned_cols=177 Identities=16% Similarity=0.164 Sum_probs=150.0
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCC----cc---cccccccccccCCCccccCCCCeE
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPL----FP---LSFKVFSSQATGVSAEADELPGRI 74 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~----~~---l~~~~~~~~~~~~~~~~~~~~~~I 74 (290)
.+...|+| .. +++|++++++|++.|+++.+++.+++|.|..... ++ ...+.+. +++|
T Consensus 100 ~V~n~pg~-~~--~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~-------------g~tv 163 (352)
T 3gg9_A 100 VVLEGKGS-PV--APAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK-------------GQTL 163 (352)
T ss_dssp EEECCCCC-SH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT-------------TCEE
T ss_pred EEEECCCC-cH--HHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC-------------CCEE
Confidence 34445777 55 8999999999999999999999999999985321 11 1113444 8999
Q ss_pred EEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccccccc
Q 022909 75 GFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASG 154 (290)
Q Consensus 75 giiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~ 154 (290)
||||+|.||+.+|++++++|++|++|||+++ .+...+.|+..++++++++++||+|++|+|.+++|++++ +++.++.
T Consensus 164 GIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li--~~~~l~~ 240 (352)
T 3gg9_A 164 GIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII--TVADLTR 240 (352)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB--CHHHHTT
T ss_pred EEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh--CHHHHhh
Confidence 9999999999999999999999999999863 344555778877899999999999999999999999999 7788999
Q ss_pred CCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 155 MGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 155 ~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||+++++||++|+.++++++|.++|+++++.....+++..|+.
T Consensus 241 mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl 283 (352)
T 3gg9_A 241 MKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPI 283 (352)
T ss_dssp SCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCC
T ss_pred CCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCC
Confidence 9999999999999999999999999999998777777776654
No 24
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.7e-29 Score=224.89 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=123.5
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|+++|+++.+++.+++|.|.....+.+. +.+. +++|||||+|+
T Consensus 118 ~V~n~pg~~~~--~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~-~~l~-------------gktiGIIGlG~ 181 (340)
T 4dgs_A 118 DVTTTPGVLAD--DVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLG-HSPK-------------GKRIGVLGLGQ 181 (340)
T ss_dssp EEECCCSSSHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCC-CCCT-------------TCEEEEECCSH
T ss_pred EEEECCCCCcc--hHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCcc-cccc-------------CCEEEEECCCH
Confidence 44555777776 88999999999999999999999999999753222222 4555 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|.+|||++++. .+.....++++++++||+|++++|.++++++++ +++.++.||+++++
T Consensus 182 IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li--~~~~l~~mk~gail 254 (340)
T 4dgs_A 182 IGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLARDSDVLAVCVAASAATQNIV--DASLLQALGPEGIV 254 (340)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHHHTCSEEEECC------------CHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHh--hHHHHhcCCCCCEE
Confidence 99999999999999999999987642 235556799999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||++|+.++++++|.++|+++.+.....+++..||.
T Consensus 255 IN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~ 290 (340)
T 4dgs_A 255 VNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPA 290 (340)
T ss_dssp EECSCC--------------CCSSEEEESCCSSSSS
T ss_pred EECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCC
Confidence 999999999999999999999998888888887764
No 25
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.95 E-value=1.1e-29 Score=226.18 Aligned_cols=175 Identities=15% Similarity=0.125 Sum_probs=150.0
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+.+.++++.|..+... ..+.+. ++++||||+|+
T Consensus 89 ~v~n~p~~~~~--~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~--~~~~l~-------------g~tvGIiG~G~ 151 (334)
T 3kb6_A 89 LVTHIPAYSPE--SVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEI--LARELN-------------RLTLGVIGTGR 151 (334)
T ss_dssp EEECCTTSCHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGG--CBCCGG-------------GSEEEEECCSH
T ss_pred EEEECCCcCcH--HHHHHHHHHHHHHhhcccccccccccccccccccc--ccceec-------------CcEEEEECcch
Confidence 44556777777 88889999999999999999999999999754322 124555 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|+++..+|++|++||+.+.. ...+.++.. .++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 152 IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~~-~~l~ell~~sDivslh~Plt~~T~~li--~~~~l~~mk~~a~l 226 (334)
T 3kb6_A 152 IGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCVY-TSLDELLKESDVISLHVPYTKETHHMI--NEERISLMKDGVYL 226 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCB--CHHHHHHSCTTEEE
T ss_pred HHHHHHHhhcccCceeeecCCccch--hhhhcCcee-cCHHHHHhhCCEEEEcCCCChhhccCc--CHHHHhhcCCCeEE
Confidence 9999999999999999999987643 334455554 489999999999999999999999999 88999999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPA 198 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~ 198 (290)
||+|||..+++++|.++|+++.+.....+++..|+..
T Consensus 227 IN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~ 263 (334)
T 3kb6_A 227 INTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEIL 263 (334)
T ss_dssp EECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHH
T ss_pred EecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCc
Confidence 9999999999999999999998888888888877643
No 26
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.95 E-value=6.7e-30 Score=227.40 Aligned_cols=175 Identities=15% Similarity=0.095 Sum_probs=149.9
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|..+...... +.+. +++|||||+|+
T Consensus 92 ~v~n~~~~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~-~~l~-------------g~tvGIIG~G~ 155 (330)
T 4e5n_A 92 WLTFVPDLLTV--PTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYG-TGLD-------------NATVGFLGMGA 155 (330)
T ss_dssp EEECCSSTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCC-CCST-------------TCEEEEECCSH
T ss_pred EEEeCCCCCch--HHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccC-CccC-------------CCEEEEEeeCH
Confidence 44556778877 88899999999999999999999999999744322112 4455 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++.+.+...+.|+... ++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~gail 232 (330)
T 4e5n_A 156 IGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTLHLV--NAELLALVRPGALL 232 (330)
T ss_dssp HHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTTTCB--CHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHHHHh--CHHHHhhCCCCcEE
Confidence 9999999999999999999999855555555566554 89999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCC
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 195 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~ 195 (290)
||++|+.++++++|.++|+++++.....+++..|
T Consensus 233 IN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E 266 (330)
T 4e5n_A 233 VNPCRGSVVDEAAVLAALERGQLGGYAADVFEME 266 (330)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGG
T ss_pred EECCCCchhCHHHHHHHHHhCCccEEEecccccc
Confidence 9999999999999999999998887777777766
No 27
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.2e-28 Score=225.35 Aligned_cols=208 Identities=17% Similarity=0.253 Sum_probs=185.9
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----CCCccCCCHHHHhhc---CCeEEEEeCChhHH
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----LGAKYQPSPDEVAAS---CDVTFAMLADPESA 141 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----~g~~~~~~~~~~~~~---aDivv~~~p~~~~~ 141 (290)
|..+|||||+|.||..+|+.|...|++|.+|||++++.+.+.+ .|+..+.++++++++ +|+|++++|.+..+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 3588999999999999999999999999999999999888877 477778899999887 99999999998888
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHH
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll 221 (290)
+.++ +++.+.++++.+|||++++.+.+...+.+.+.+.+++|+++|+++++.....++ .++.++++++++.++++|
T Consensus 89 ~~vl---~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll 164 (497)
T 2p4q_A 89 DALI---NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIF 164 (497)
T ss_dssp HHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHH
T ss_pred HHHH---HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHH
Confidence 8888 457788999999999999999999899999988899999999999887766677 577788999999999999
Q ss_pred HHhCCc------EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHH-CCCCHHHHHHHHhhcCCC
Q 022909 222 DIMGKS------RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEF-VDFLINTVTMFLQSFSFG 281 (290)
Q Consensus 222 ~~~G~~------~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~-~G~~~~~~~~~i~~~~~g 281 (290)
+.+|.. +.++++.|.+.++|++.|.+.+.+ .+++|++.++++ .|++++++.+++..+..|
T Consensus 165 ~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g 232 (497)
T 2p4q_A 165 QSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNG 232 (497)
T ss_dssp HHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTT
T ss_pred HHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCC
Confidence 999987 678888999999999999998777 999999999999 699999999999754443
No 28
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.95 E-value=2.7e-29 Score=225.27 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=144.8
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|.+........+.+. +++|||||+|.
T Consensus 122 ~V~n~~~~~~~--~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~-------------gktvGIIGlG~ 186 (365)
T 4hy3_A 122 HVVTTGQVFAE--PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIA-------------GSEIGIVGFGD 186 (365)
T ss_dssp EEEECGGGGHH--HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSS-------------SSEEEEECCSH
T ss_pred EEEeCCCccch--HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccC-------------CCEEEEecCCc
Confidence 45556777776 8899999999999999999999999999642221111124455 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++++|++|++||+++. .+...+.|+.. .++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 187 IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li--~~~~l~~mk~gail 262 (365)
T 4hy3_A 187 LGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFL--GAEAFSSMRRGAAF 262 (365)
T ss_dssp HHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CC--CHHHHHTSCTTCEE
T ss_pred ccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhc--CHHHHhcCCCCcEE
Confidence 999999999999999999999863 34445567765 489999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||++|+.++++++|.++|+++.+. ...+++..|+.
T Consensus 263 IN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl 297 (365)
T 4hy3_A 263 ILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPL 297 (365)
T ss_dssp EECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSC
T ss_pred EECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCC
Confidence 999999999999999999999887 56788877664
No 29
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.95 E-value=1.1e-29 Score=224.98 Aligned_cols=173 Identities=10% Similarity=0.060 Sum_probs=147.1
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccc-cccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEccc
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSY-FRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMG 80 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~-~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G 80 (290)
.+.+.|+|... +++|++++++|++.|+++.+ .+.+++|.|.... ..+.+. +++|||||+|
T Consensus 86 ~v~n~~g~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~-------------gktvGIiGlG 146 (324)
T 3evt_A 86 VVANTSGIHAD--AISESVLAAMLSVVRGYHAAWLNQRGARQWALPM----TTSTLT-------------GQQLLIYGTG 146 (324)
T ss_dssp EEECCTTHHHH--HHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCST-------------TCEEEEECCS
T ss_pred EEEECCCcCch--HHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC----CCcccc-------------CCeEEEECcC
Confidence 34455666555 88999999999999999999 9999999998543 114455 8999999999
Q ss_pred HhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCE
Q 022909 81 IMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKG 160 (290)
Q Consensus 81 ~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 160 (290)
.||+.+|++++++|++|++|||+++..+.+.. .....++++++++||+|++|+|.+++|++++ +++.++.||++++
T Consensus 147 ~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t~~li--~~~~l~~mk~gai 222 (324)
T 3evt_A 147 QIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTTHHLF--STELFQQTKQQPM 222 (324)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGGTTCB--SHHHHHTCCSCCE
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHHHHhc--CHHHHhcCCCCCE
Confidence 99999999999999999999999765443322 1234588999999999999999999999999 7788999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 161 YVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 161 lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
+||+||+.++++++|.++|+++.+.....+++..|+.
T Consensus 223 lIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl 259 (324)
T 3evt_A 223 LINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPL 259 (324)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSC
T ss_pred EEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCC
Confidence 9999999999999999999999998878888887764
No 30
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.95 E-value=1e-27 Score=223.73 Aligned_cols=204 Identities=22% Similarity=0.293 Sum_probs=183.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC----CCccCCCHHHHhhc---CCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL----GAKYQPSPDEVAAS---CDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~----g~~~~~~~~~~~~~---aDivv~~~p~~~~~~~ 143 (290)
+++|||||+|.||+.+|+.|...|++|.+|||++++.+.+.+. |+..+.++++++++ +|+|++++|.++.++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 94 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDA 94 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHH
Confidence 5889999999999999999999999999999999888877664 67778899999887 9999999998888888
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHH
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDI 223 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~ 223 (290)
++ +++.+.++++.+|||++++.+.+...+.+.+++.+++++++|+++++.....++ .++++++++.++.++++|+.
T Consensus 95 vl---~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~ 170 (480)
T 2zyd_A 95 AI---DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILTK 170 (480)
T ss_dssp HH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHHHH
T ss_pred HH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHHHH
Confidence 88 456788999999999999999998889999988899999999998877666677 67888899999999999999
Q ss_pred hCCc-------EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHH-CCCCHHHHHHHHhhc
Q 022909 224 MGKS-------RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEF-VDFLINTVTMFLQSF 278 (290)
Q Consensus 224 ~G~~-------~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~-~G~~~~~~~~~i~~~ 278 (290)
+|.. +.++++.|.+.++|++.|.+.+.+ .+++|++.++++ .|++++++.+++..+
T Consensus 171 ~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w 234 (480)
T 2zyd_A 171 IAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEW 234 (480)
T ss_dssp HSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 9987 678889999999999999998777 999999999999 699999999999653
No 31
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.95 E-value=1.1e-29 Score=224.38 Aligned_cols=170 Identities=12% Similarity=0.097 Sum_probs=142.7
Q ss_pred eecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHhHH
Q 022909 5 VKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIMGT 84 (290)
Q Consensus 5 ~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~iG~ 84 (290)
..|+|.. ..+++|++++++|++.|+++.+++.+++|.|..... +.+. +++|||||+|+||+
T Consensus 92 ~~~~~~~-~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~-----~~l~-------------g~tvGIiG~G~IG~ 152 (315)
T 3pp8_A 92 RLEDTGM-GLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPE-----YTRE-------------EFSVGIMGAGVLGA 152 (315)
T ss_dssp EC--CCC-HHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCC-----CCST-------------TCCEEEECCSHHHH
T ss_pred EcCCCCc-cHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCC-----CCcC-------------CCEEEEEeeCHHHH
Confidence 3455543 348999999999999999999999999999985422 3444 89999999999999
Q ss_pred HHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEe
Q 022909 85 PMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDV 164 (290)
Q Consensus 85 ~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~ 164 (290)
.+|++++.+|++|++|||+++..+.+... ....++++++++||+|++|+|.+++|++++ +++.++.||+++++||+
T Consensus 153 ~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~t~~li--~~~~l~~mk~gailIN~ 228 (315)
T 3pp8_A 153 KVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQTVGII--NSELLDQLPDGAYVLNL 228 (315)
T ss_dssp HHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGGGTTCB--SHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchhhhhhc--cHHHHhhCCCCCEEEEC
Confidence 99999999999999999988654332211 112578999999999999999999999999 77889999999999999
Q ss_pred cCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 165 STVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 165 s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
+|+.++++++|.++|+++.+.....+++..|+.
T Consensus 229 aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl 261 (315)
T 3pp8_A 229 ARGVHVQEADLLAALDSGKLKGAMLDVFSQEPL 261 (315)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred CCChhhhHHHHHHHHHhCCccEEEcCCCCCCCC
Confidence 999999999999999999888777788877764
No 32
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.95 E-value=2e-29 Score=224.62 Aligned_cols=174 Identities=15% Similarity=0.108 Sum_probs=149.4
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|+.. +++|++++++|++.|+++.+++.+++|.|.+.... ..+.+. +++|||||+|.
T Consensus 89 ~v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~--~~~~l~-------------g~tvgIiG~G~ 151 (334)
T 2pi1_A 89 LVTHIPAYSPE--SVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEI--LARELN-------------RLTLGVIGTGR 151 (334)
T ss_dssp EEECCTTSCHH--HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGG--CBCCGG-------------GSEEEEECCSH
T ss_pred EEEECCCcCcH--HHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCc--cceecc-------------CceEEEECcCH
Confidence 45556788877 88999999999999999999999999999754111 124555 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||+++... .+.++... ++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 152 IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~gail 226 (334)
T 2pi1_A 152 IGSRVAMYGLAFGMKVLCYDVVKREDL--KEKGCVYT-SLDELLKESDVISLHVPYTKETHHMI--NEERISLMKDGVYL 226 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHH--HHTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCB--CHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHCcCEEEEECCCcchhh--HhcCceec-CHHHHHhhCCEEEEeCCCChHHHHhh--CHHHHhhCCCCcEE
Confidence 999999999999999999999976542 24566655 59999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||++|+.++++++|.++|+++.+.....+++..|+.
T Consensus 227 IN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~ 262 (334)
T 2pi1_A 227 INTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEI 262 (334)
T ss_dssp EECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHH
T ss_pred EECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCC
Confidence 999999999999999999999888777788877664
No 33
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.95 E-value=4e-29 Score=218.04 Aligned_cols=168 Identities=13% Similarity=0.147 Sum_probs=146.2
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
+++|++... .+++|++++++|++.|+++.+++.+++|.|..... +.+. +++|||||+|.|
T Consensus 74 ~~~~~~~~~--~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-----~~l~-------------g~tvGIIGlG~I 133 (290)
T 3gvx_A 74 LCSNAGAYS--ISVAEHAFALLLAHAKNILENNELMKAGIFRQSPT-----TLLY-------------GKALGILGYGGI 133 (290)
T ss_dssp EECCHHHHH--HHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCC-----CCCT-------------TCEEEEECCSHH
T ss_pred EeecCCcce--eeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCCc-----eeee-------------cchheeeccCch
Confidence 566764322 48999999999999999999999999999985432 3444 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|++++++|++|++|||++++.+. ....+++++++++||+|++|+|.++++++++ +++.++.||+++++|
T Consensus 134 G~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li--~~~~l~~mk~gailI 206 (290)
T 3gvx_A 134 GRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDKTRGMV--NSRLLANARKNLTIV 206 (290)
T ss_dssp HHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTTTTTCB--SHHHHTTCCTTCEEE
T ss_pred hHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeeccccchhhh--hHHHHhhhhcCceEE
Confidence 999999999999999999999765432 4456699999999999999999999999999 778899999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
|+||+.++++++|.++|+++++.....+++..++.
T Consensus 207 N~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~ 241 (290)
T 3gvx_A 207 NVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE 241 (290)
T ss_dssp ECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS
T ss_pred EeehhcccCCcchhhhhhhccceEEeeccccCCcc
Confidence 99999999999999999999998888888877664
No 34
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.95 E-value=2.4e-28 Score=221.77 Aligned_cols=172 Identities=11% Similarity=0.064 Sum_probs=142.3
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|..+ +++|++++++|++.|+++.+++.+++|.|.+.... + +++. +++|||||+|+
T Consensus 105 ~V~n~p~~n~~--aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~--~-~el~-------------gktvGIIGlG~ 166 (416)
T 3k5p_A 105 PVFNAPFSNTR--SVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIG--S-REVR-------------GKTLGIVGYGN 166 (416)
T ss_dssp CEECCSSTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTT--C-CCST-------------TCEEEEECCSH
T ss_pred EEEeCCCcccH--HHHHHHHHHHHHHhcccHHHHHhhhcccccccCCC--C-ccCC-------------CCEEEEEeeCH
Confidence 34555777777 88899999999999999999999999999854321 1 3455 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|+++.++|++|++||++++... .+.....++++++++||+|++|+|.+++|++++ +++.++.||+|+++
T Consensus 167 IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li--~~~~l~~mk~gail 240 (416)
T 3k5p_A 167 IGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLI--TEAKLRKMKKGAFL 240 (416)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEEECCCC-----CCB--CHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCcchhcc----cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhc--CHHHHhhCCCCcEE
Confidence 999999999999999999999864321 234456799999999999999999999999999 77889999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||+||+.++++++|.++|+++.+.....+++..|+.
T Consensus 241 IN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~ 276 (416)
T 3k5p_A 241 INNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPA 276 (416)
T ss_dssp EECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCS
T ss_pred EECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCC
Confidence 999999999999999999998888777788877654
No 35
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.95 E-value=3.8e-27 Score=206.46 Aligned_cols=208 Identities=25% Similarity=0.364 Sum_probs=181.5
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGA 151 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~ 151 (290)
|+|+|||+|.||..+++.|.. |++|.+|||++++.+.+.+.|+...+ ++++++++|+|++++|.+..++.++ +++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~---~~l 76 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA---EAL 76 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH---HHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH---HHH
Confidence 689999999999999999999 99999999999887777766666555 7788899999999999877788777 455
Q ss_pred cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEe
Q 022909 152 ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 231 (290)
Q Consensus 152 ~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~ 231 (290)
.+.+++++++|++|++.+.+.+.+.+.+++.+++++++|+++++.....+.+.++++++++.++.++++| .+|.+++++
T Consensus 77 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~~~ 155 (289)
T 2cvz_A 77 YPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVHV 155 (289)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEEE
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeEEc
Confidence 6778999999999999998888999988877888999998776655555666677788889999999999 999988899
Q ss_pred CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 232 GDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 232 ~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
++.+.+.+.|++.|.+...+ .++.|++.++++.|++++++.+++.++..+++++
T Consensus 156 ~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~ 210 (289)
T 2cvz_A 156 GPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNAT 210 (289)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHH
Confidence 99999999999999988887 9999999999999999999999999988777543
No 36
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.95 E-value=1e-28 Score=220.12 Aligned_cols=172 Identities=10% Similarity=0.057 Sum_probs=146.1
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCcccccccc-CCCCCCCCCcccccccccccccCCCccccCCCCeEEEEccc
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKP-INSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMG 80 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~-~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G 80 (290)
.+...|+|+.. +++|++++++|++.|+++.+++.++ +|.|.+... ...+.+. +++|||||+|
T Consensus 95 ~v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~--~~~~~l~-------------gktvgIiGlG 157 (343)
T 2yq5_A 95 LVTNVPVYSPR--AIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSN--LISNEIY-------------NLTVGLIGVG 157 (343)
T ss_dssp EEECCSCSCHH--HHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGG--GCBCCGG-------------GSEEEEECCS
T ss_pred EEEECCCCCcH--HHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccC--CCccccC-------------CCeEEEEecC
Confidence 34455788887 8899999999999999999999999 888753221 1124555 8999999999
Q ss_pred HhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCE
Q 022909 81 IMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKG 160 (290)
Q Consensus 81 ~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 160 (290)
.||+.+|++++++|++|++|||+++.. .+.+.... ++++++++||+|++|+|.+++|++++ +++.++.||++++
T Consensus 158 ~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~~-~l~ell~~aDvV~l~~Plt~~t~~li--~~~~l~~mk~gai 231 (343)
T 2yq5_A 158 HIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLTYT-DFDTVLKEADIVSLHTPLFPSTENMI--GEKQLKEMKKSAY 231 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCB--CHHHHHHSCTTCE
T ss_pred HHHHHHHHHHhhCCCEEEEECCChhhh---hhcccccc-CHHHHHhcCCEEEEcCCCCHHHHHHh--hHHHHhhCCCCcE
Confidence 999999999999999999999997641 12234444 89999999999999999999999999 7788999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 161 YVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 161 lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
+||++|+.++++++|.++|+++.+.....+++..|+
T Consensus 232 lIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 267 (343)
T 2yq5_A 232 LINCARGELVDTGALIKALQDGEIAGAGLDTLAGES 267 (343)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGG
T ss_pred EEECCCChhhhHHHHHHHHHcCCCcEEEecccccCC
Confidence 999999999999999999999988877778887776
No 37
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.95 E-value=9.2e-29 Score=222.89 Aligned_cols=178 Identities=10% Similarity=0.028 Sum_probs=150.9
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|.... .....+.+. +++|||||+|+
T Consensus 111 ~V~n~pg~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~-------------g~tvgIIG~G~ 174 (364)
T 2j6i_A 111 SVLEVTGSNVV--SVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAA-IAKDAYDIE-------------GKTIATIGAGR 174 (364)
T ss_dssp EEEECTTSSHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHH-HHTTCCCST-------------TCEEEEECCSH
T ss_pred EEEECCCcCcH--HHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCc-ccCCcccCC-------------CCEEEEECcCH
Confidence 34555777776 889999999999999999999999999996311 000113444 89999999999
Q ss_pred hHHHHHHHHHHCCCe-EEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCE
Q 022909 82 MGTPMAQNLLKAGCD-VTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKG 160 (290)
Q Consensus 82 iG~~la~~l~~~g~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 160 (290)
||+.+|+++..+|++ |++|||++.+.+...+.|+....++++++++||+|++|+|.+++|++++ +++.++.|+++++
T Consensus 175 IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~ga~ 252 (364)
T 2j6i_A 175 IGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLI--NKELLSKFKKGAW 252 (364)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCB--CHHHHTTSCTTEE
T ss_pred HHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHh--CHHHHhhCCCCCE
Confidence 999999999999997 9999998876665566677766789999999999999999999999999 6778999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 161 YVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 161 lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
+||++|+.++++++|.++|+++++.....+++..|+.
T Consensus 253 lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~ 289 (364)
T 2j6i_A 253 LVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPA 289 (364)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred EEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCC
Confidence 9999999999999999999999888777778877653
No 38
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=5e-28 Score=213.59 Aligned_cols=174 Identities=13% Similarity=0.078 Sum_probs=146.7
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|.+... ..+.+. +++|||||+|+
T Consensus 91 ~v~n~~g~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~---~~~~l~-------------g~~vgIiG~G~ 152 (307)
T 1wwk_A 91 EVVNAPAASSR--SVAELAVGLMFSVARKIAFADRKMREGVWAKKEA---MGIELE-------------GKTIGIIGFGR 152 (307)
T ss_dssp EEECCGGGGHH--HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTC---CBCCCT-------------TCEEEEECCSH
T ss_pred EEEECCCCChH--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCc---CCcccC-------------CceEEEEccCH
Confidence 34455777766 8899999999999999999999999999974211 113444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++++ +...+.|+... +++++++++|+|++|+|.++++++++ +++.++.||+++++
T Consensus 153 IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t~~li--~~~~l~~mk~ga~l 228 (307)
T 1wwk_A 153 IGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIHVPLVESTYHLI--NEERLKLMKKTAIL 228 (307)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCB--CHHHHHHSCTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEecCCChHHhhhc--CHHHHhcCCCCeEE
Confidence 9999999999999999999999876 44555677654 89999999999999999999999998 66788999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
||++|+.++++++|.++|+++.+......++..++.
T Consensus 229 in~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~ 264 (307)
T 1wwk_A 229 INTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPL 264 (307)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSC
T ss_pred EECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCC
Confidence 999999999999999999998887666666665543
No 39
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.95 E-value=1.2e-28 Score=223.00 Aligned_cols=176 Identities=8% Similarity=0.020 Sum_probs=146.6
Q ss_pred eee-cccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 4 LVK-SSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 4 ~~~-~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
++| |+|... +++|++++++|++.|+++.+++.+++|.|....... ..+.+. +++|||||+|+|
T Consensus 139 V~n~~g~~~~--~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~-~~~~l~-------------gktvGIIGlG~I 202 (393)
T 2nac_A 139 VAEVTYCNSI--SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVS-HAYDLE-------------AMHVGTVAAGRI 202 (393)
T ss_dssp EEECTTTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHT-TCCCCT-------------TCEEEEECCSHH
T ss_pred EEeCCCcccH--HHHHHHHHHHHHHHhccHHHHHHHHcCCCCcccccc-CCccCC-------------CCEEEEEeECHH
Confidence 455 555444 889999999999999999999999999996321000 012344 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|++++.+|++|++||+++.+.+...+.|+....++++++++||+|++|+|.+++|++++ +++.++.||+++++|
T Consensus 203 G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li--~~~~l~~mk~gailI 280 (393)
T 2nac_A 203 GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMI--NDETLKLFKRGAYIV 280 (393)
T ss_dssp HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCB--SHHHHTTSCTTEEEE
T ss_pred HHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHh--hHHHHhhCCCCCEEE
Confidence 999999999999999999998766555555677766789999999999999999999999999 677899999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
|++|+.++++++|.++|+++.+.....+++..|+.
T Consensus 281 N~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~ 315 (393)
T 2nac_A 281 NTARGKLCDRDAVARALESGRLAGYAGDVWFPQPA 315 (393)
T ss_dssp ECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSC
T ss_pred ECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCC
Confidence 99999999999999999998777666667765553
No 40
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.94 E-value=4e-28 Score=216.11 Aligned_cols=173 Identities=12% Similarity=0.097 Sum_probs=146.3
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|.... ...+.+. +++|||||+|.
T Consensus 114 ~v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~---~~~~~l~-------------g~tvgIIGlG~ 175 (335)
T 2g76_A 114 LVMNTPNGNSL--SAAELTCGMIMCLARQIPQATASMKDGKWERKK---FMGTELN-------------GKTLGILGLGR 175 (335)
T ss_dssp EEECCSSTTHH--HHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGG---GCBCCCT-------------TCEEEEECCSH
T ss_pred EEEECCCccch--HHHHHHHHHHHHHHhchHHHHHHHHcCCCCccC---CCCcCCC-------------cCEEEEEeECH
Confidence 34445777776 888999999999999999999999999997421 1113444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++++|++|++|||++++ +...+.|+.. .++++++++||+|++|+|.++++++++ +++.++.||+++++
T Consensus 176 IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~gail 251 (335)
T 2g76_A 176 IGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLL--NDNTFAQCKKGVRV 251 (335)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSB--CHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhh--CHHHHhhCCCCcEE
Confidence 9999999999999999999998765 3445567665 489999999999999999999999999 67789999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||++|+.++++++|.++|+++.+.....+++..++
T Consensus 252 IN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP 286 (335)
T 2g76_A 252 VNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP 286 (335)
T ss_dssp EECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS
T ss_pred EECCCccccCHHHHHHHHHhCCccEEEEeecCCCC
Confidence 99999999999999999999887766666776665
No 41
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.94 E-value=7.3e-28 Score=213.74 Aligned_cols=177 Identities=12% Similarity=0.078 Sum_probs=146.3
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|..+.......+.+. +++|||||+|+
T Consensus 92 ~v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~-------------g~~vgIIG~G~ 156 (320)
T 1gdh_A 92 KVGNAPHGVTV--ATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLD-------------NKTLGIYGFGS 156 (320)
T ss_dssp EEECCCCSCHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCT-------------TCEEEEECCSH
T ss_pred EEEEcCCCCHH--HHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCC-------------CCEEEEECcCH
Confidence 34455777776 8899999999999999999999999999963221111113444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeC-CccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNR-TKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKG 160 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~-~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 160 (290)
||+.+|+++..+|++|++||+ ++++ ....+.|+...++++++++++|+|++|+|.++++++++ +++.++.|+++++
T Consensus 157 IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i--~~~~l~~mk~gai 233 (320)
T 1gdh_A 157 IGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF--NKATIKSLPQGAI 233 (320)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB--SHHHHTTSCTTEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhc--CHHHHhhCCCCcE
Confidence 999999999999999999999 8765 33445677766689999999999999999999999998 6678899999999
Q ss_pred EEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 161 YVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 161 lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
+||++|+.++++++|.++|+++++......++..++
T Consensus 234 lIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP 269 (320)
T 1gdh_A 234 VVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP 269 (320)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred EEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 999999999999999999999877765556665554
No 42
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.94 E-value=2.6e-26 Score=214.30 Aligned_cols=207 Identities=22% Similarity=0.322 Sum_probs=181.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC----CCccCCCHHHHhhc---CCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL----GAKYQPSPDEVAAS---CDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~----g~~~~~~~~~~~~~---aDivv~~~p~~~~~~~ 143 (290)
.++|||||+|.||+.+|+.|...|++|.+|||++++.+.+.+. ++..+.++++++++ +|+|++++|.+..++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~ 84 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA 84 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence 4789999999999999999999999999999999888877663 67777899999886 9999999998888888
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHH
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDI 223 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~ 223 (290)
++ +++.+.++++.+||+++++.+.+...+.+.+.+.+++++++|+++++.....++ .++.+++++..+.++++|+.
T Consensus 85 vl---~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~ 160 (474)
T 2iz1_A 85 TI---KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIFEQ 160 (474)
T ss_dssp HH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHHHH
T ss_pred HH---HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHHHH
Confidence 87 456778899999999999998888888888887889999999988776655666 45677889999999999999
Q ss_pred hCCc--------EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHH-CCCCHHHHHHHHhhcCCC
Q 022909 224 MGKS--------RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEF-VDFLINTVTMFLQSFSFG 281 (290)
Q Consensus 224 ~G~~--------~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~-~G~~~~~~~~~i~~~~~g 281 (290)
+|.. +.++++.|.+.+.|++.|.+.+.+ .+++|++.++++ .|++++++.+++..+..|
T Consensus 161 ~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g 228 (474)
T 2iz1_A 161 IAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEG 228 (474)
T ss_dssp HSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTT
T ss_pred HhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCC
Confidence 9987 567888999999999999998877 999999999999 799999999999765554
No 43
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.94 E-value=2.5e-28 Score=222.43 Aligned_cols=170 Identities=12% Similarity=0.017 Sum_probs=138.8
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
+...|+|... +++|++++++|+++|+++++++.+++|.|.+.... .+++. +++|||||+|+|
T Consensus 95 V~n~p~~n~~--~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~---~~el~-------------gktlGiIGlG~I 156 (404)
T 1sc6_A 95 VFNAPFSNTR--SVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAG---SFEAR-------------GKKLGIIGYGHI 156 (404)
T ss_dssp EECCTTTTHH--HHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCST-------------TCEEEEECCSHH
T ss_pred EEecCcccHH--HHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCC---ccccC-------------CCEEEEEeECHH
Confidence 4445677776 88999999999999999999999999999743211 13455 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|+++.++|++|++|||++... ..++....++++++++||+|++|+|.+++|++++ +++.++.||+|+++|
T Consensus 157 G~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~ga~lI 230 (404)
T 1sc6_A 157 GTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMM--GAKEISLMKPGSLLI 230 (404)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCB--CHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHh--hHHHHhhcCCCeEEE
Confidence 9999999999999999999986532 1235566789999999999999999999999999 677899999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
|+||+.++++++|.++|+++.+.....+++..+|
T Consensus 231 N~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP 264 (404)
T 1sc6_A 231 NASRGTVVDIPALADALASKHLAGAAIDVFPTEP 264 (404)
T ss_dssp ECSCSSSBCHHHHHHHHHTTSEEEEEEEC-----
T ss_pred ECCCChHHhHHHHHHHHHcCCccEEEEeecCCCC
Confidence 9999999999999999999877655455555544
No 44
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.94 E-value=1.1e-27 Score=210.87 Aligned_cols=164 Identities=13% Similarity=0.132 Sum_probs=140.8
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+.++|++... +++|++++++|++.|+++.+++.+++|.|...... +.+. +++|||||+|+
T Consensus 74 ~v~~~~~~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~----~~l~-------------g~~vgIIG~G~ 134 (303)
T 1qp8_A 74 TVAGNAGSNAD--AVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEI----PLIQ-------------GEKVAVLGLGE 134 (303)
T ss_dssp CEECCCSSSHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCC----CCCT-------------TCEEEEESCST
T ss_pred EEEECCCCCch--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCC----CCCC-------------CCEEEEEccCH
Confidence 34555766665 89999999999999999999999999999643111 2344 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||+++ +. +.....++++++++||+|++|+|.++++++++ +++.++.||+++++
T Consensus 135 IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i--~~~~l~~mk~gail 206 (303)
T 1qp8_A 135 IGTRVGKILAALGAQVRGFSRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLV--KYQHLALMAEDAVF 206 (303)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCB--CHHHHTTSCTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHh--CHHHHhhCCCCCEE
Confidence 999999999999999999999876 21 34445689999999999999999999999999 66789999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccC
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVS 192 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~ 192 (290)
||+||+.++++++|.++|+++.+.....+++
T Consensus 207 in~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 207 VNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp EECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred EECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 9999999999999999999988877777777
No 45
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.94 E-value=1.3e-27 Score=213.20 Aligned_cols=171 Identities=15% Similarity=0.087 Sum_probs=145.8
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
+...|+|+.. +++|++++++|++.|+++.+++.+++|.|.+... ..+.+. +++|||||+|+|
T Consensus 96 v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~---~~~~l~-------------g~~vgIiG~G~I 157 (333)
T 1j4a_A 96 ITNVPVYSPN--AIAEHAAIQAARILRQDKAMDEKVARHDLRWAPT---IGREVR-------------DQVVGVVGTGHI 157 (333)
T ss_dssp EECCCCSCHH--HHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTC---CBCCGG-------------GSEEEEECCSHH
T ss_pred EEeCCCCCch--HHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCc---ccccCC-------------CCEEEEEccCHH
Confidence 4444777777 8889999999999999999999999999963211 113455 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|++++.+|++|++||+++++. +.+ .+...+++++++++||+|++|+|.++++++++ +++.++.|++++++|
T Consensus 158 G~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li--~~~~l~~mk~ga~lI 232 (333)
T 1j4a_A 158 GQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMI--NDESIAKMKQDVVIV 232 (333)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCB--SHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHH--hHHHHhhCCCCcEEE
Confidence 9999999999999999999987653 233 24445589999999999999999999999998 667889999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
|++|+.++++++|.++|+++++.....+++..|+
T Consensus 233 n~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 266 (333)
T 1j4a_A 233 NVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEV 266 (333)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCT
T ss_pred ECCCCcccCHHHHHHHHHhCCceEEEEecCCCCC
Confidence 9999999999999999999988887788888776
No 46
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.94 E-value=1.6e-27 Score=213.14 Aligned_cols=177 Identities=11% Similarity=0.044 Sum_probs=146.3
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCC-c---ccccccccccccCCCccccCCCCeEEEE
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPL-F---PLSFKVFSSQATGVSAEADELPGRIGFL 77 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~-~---~l~~~~~~~~~~~~~~~~~~~~~~Igii 77 (290)
.+...|+|+.. +++|++++++|++.|+++.+++.+++|.|..... . ....+.+. +++||||
T Consensus 110 ~V~n~~~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~-------------g~tvGII 174 (347)
T 1mx3_A 110 AVCNVPAASVE--ETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR-------------GETLGII 174 (347)
T ss_dssp EEECCCSTTHH--HHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCT-------------TCEEEEE
T ss_pred eEEECCCCCHH--HHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCC-------------CCEEEEE
Confidence 34455788777 8899999999999999999999999999963210 0 00002333 8999999
Q ss_pred cccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCC
Q 022909 78 GMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGP 157 (290)
Q Consensus 78 G~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~ 157 (290)
|+|+||+.+|+++.++|++|++||+++++. ...+.|+..+.++++++++||+|++++|.++++++++ +++.++.||+
T Consensus 175 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li--~~~~l~~mk~ 251 (347)
T 1mx3_A 175 GLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI--NDFTVKQMRQ 251 (347)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB--SHHHHTTSCT
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHh--HHHHHhcCCC
Confidence 999999999999999999999999987642 2334567666789999999999999999999999999 6778999999
Q ss_pred CCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 158 GKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 158 ~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
++++||++|+.++++++|.++|+++++.....+++..++
T Consensus 252 gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 290 (347)
T 1mx3_A 252 GAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEP 290 (347)
T ss_dssp TEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS
T ss_pred CCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCC
Confidence 999999999999999999999999988766666666555
No 47
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.94 E-value=7.3e-26 Score=211.67 Aligned_cols=207 Identities=17% Similarity=0.233 Sum_probs=181.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----CCCccCCCHHHHhh---cCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----LGAKYQPSPDEVAA---SCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----~g~~~~~~~~~~~~---~aDivv~~~p~~~~~~ 142 (290)
.++|||||+|.||+.+|..|...|++|.+|||++++.+.+.+ .++..+.+++++++ ++|+|++++|.+..++
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~ 81 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CCeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHH
Confidence 368999999999999999999999999999999998888876 56777889999875 8999999999877888
Q ss_pred HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHH
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLD 222 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~ 222 (290)
.++ +++.+.++++.+||+++++.+.+...+.+.+.+.+++++++|+++++.....++ .++.+++++..+.++++|+
T Consensus 82 ~vl---~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll~ 157 (482)
T 2pgd_A 82 NFI---EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQ 157 (482)
T ss_dssp HHH---HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHH
T ss_pred HHH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC-eEEeCCCHHHHHHHHHHHH
Confidence 888 456678899999999999999888888888888889999999998877666666 5577788889999999999
Q ss_pred HhCCcE-------EEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHC-CCCHHHHHHHHhhcCCC
Q 022909 223 IMGKSR-------FYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFV-DFLINTVTMFLQSFSFG 281 (290)
Q Consensus 223 ~~G~~~-------~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~-G~~~~~~~~~i~~~~~g 281 (290)
.+|.++ .++++.|.+.+.|++.|.+.+.+ .+++|++.++++. |++++++.+++..+..|
T Consensus 158 ~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g 225 (482)
T 2pgd_A 158 GIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKT 225 (482)
T ss_dssp HHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTT
T ss_pred HhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCC
Confidence 999876 56788999999999999988777 9999999999999 99999999999765544
No 48
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.94 E-value=6.7e-27 Score=208.66 Aligned_cols=176 Identities=13% Similarity=0.163 Sum_probs=146.1
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
+...|+|... +++|++++++|++.|+++.+++.+++|.|..+.......+.+. +++|||||+|.|
T Consensus 102 v~n~~~~~~~--~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~-------------g~~vgIIG~G~i 166 (330)
T 2gcg_A 102 VGYTPDVLTD--TTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLT-------------QSTVGIIGLGRI 166 (330)
T ss_dssp EECCCSTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCT-------------TCEEEEECCSHH
T ss_pred EEeCCCCChH--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCC-------------CCEEEEECcCHH
Confidence 4445677666 8899999999999999999999999999974321111113444 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|+.+..+|++|++||+++++.+...+.++... +++++++++|+|++|+|.++++++++ +++.++.|++++++|
T Consensus 167 G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i--~~~~~~~mk~gailI 243 (330)
T 2gcg_A 167 GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLC--NKDFFQKMKETAVFI 243 (330)
T ss_dssp HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCB--SHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhh--CHHHHhcCCCCcEEE
Confidence 999999999999999999998876666556677666 89999999999999999999999998 566788999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
|+||+.+++++++.++++++++......++.+++
T Consensus 244 n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ep 277 (330)
T 2gcg_A 244 NISRGDVVNQDDLYQALASGKIAAAGLDVTSPEP 277 (330)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS
T ss_pred ECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCC
Confidence 9999999999999999999877665555665554
No 49
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.94 E-value=1.3e-27 Score=211.47 Aligned_cols=171 Identities=14% Similarity=0.071 Sum_probs=145.8
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|.... . +.+. +++|||||+|+
T Consensus 93 ~v~n~~g~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~----~-~~l~-------------g~~vgIIG~G~ 152 (313)
T 2ekl_A 93 KVVYAPGASTD--SAVELTIGLMIAAARKMYTSMALAKSGIFKKIE----G-LELA-------------GKTIGIVGFGR 152 (313)
T ss_dssp EEECCTTTTHH--HHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCC----C-CCCT-------------TCEEEEESCSH
T ss_pred EEEeCCCCCch--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC----C-CCCC-------------CCEEEEEeeCH
Confidence 34455777666 889999999999999999999999999996211 1 3444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++++. ...+.|+... +++++++++|+|++|+|.++++++++ +++.++.|++++++
T Consensus 153 IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~-~l~ell~~aDvVvl~~P~~~~t~~li--~~~~l~~mk~ga~l 228 (313)
T 2ekl_A 153 IGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAV-SLEELLKNSDVISLHVTVSKDAKPII--DYPQFELMKDNVII 228 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEEC-CHHHHHHHCSEEEECCCCCTTSCCSB--CHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceec-CHHHHHhhCCEEEEeccCChHHHHhh--CHHHHhcCCCCCEE
Confidence 99999999999999999999998753 3455677654 89999999999999999999999998 66778999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||++|+.++++++|.++|+++++.....+++..+|
T Consensus 229 In~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP 263 (313)
T 2ekl_A 229 VNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEP 263 (313)
T ss_dssp EESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSS
T ss_pred EECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCC
Confidence 99999999999999999999888766667777665
No 50
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.93 E-value=4.9e-27 Score=207.51 Aligned_cols=170 Identities=11% Similarity=0.003 Sum_probs=140.5
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|..........+.+. +++|||||+|+
T Consensus 90 ~v~n~~~~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~-------------g~~vgIIG~G~ 154 (311)
T 2cuk_A 90 RVTHTPGVLTE--ATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQ-------------GLTLGLVGMGR 154 (311)
T ss_dssp EEECCCSTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCT-------------TCEEEEECCSH
T ss_pred EEEECCCCChH--HHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCC-------------CCEEEEEEECH
Confidence 34455777776 8889999999999999999999999999963221111113444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++++.. + ...+++++++++|+|++|+|.++++++++ +++.++.|++++++
T Consensus 155 IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li--~~~~l~~mk~ga~l 225 (311)
T 2cuk_A 155 IGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPETHRLL--NRERLFAMKRGAIL 225 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCB--CHHHHTTSCTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhc--CHHHHhhCCCCcEE
Confidence 999999999999999999999886543 2 24589999999999999999999999998 56778999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||++|+.+++++++.++|+ +.+.....+++..++
T Consensus 226 in~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP 259 (311)
T 2cuk_A 226 LNTARGALVDTEALVEALR-GHLFGAGLDVTDPEP 259 (311)
T ss_dssp EECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSS
T ss_pred EECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCC
Confidence 9999999999999999999 877665556666554
No 51
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.93 E-value=2.9e-27 Score=210.79 Aligned_cols=172 Identities=14% Similarity=0.070 Sum_probs=145.3
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHh
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIM 82 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~i 82 (290)
+...|+|+.. +++|++++++|++.|+++.+++.+++|.|.+... ...+.+. +++|||||+|.|
T Consensus 95 v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~--~~~~~l~-------------g~~vgIiG~G~I 157 (331)
T 1xdw_A 95 MAFVPRYSPN--AIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAF--MFSKEVR-------------NCTVGVVGLGRI 157 (331)
T ss_dssp EECCCCCCHH--HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCST--TCCCCGG-------------GSEEEEECCSHH
T ss_pred EEeCCCCCcH--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccC--cCccCCC-------------CCEEEEECcCHH
Confidence 4445778777 7889999999999999999999999999963111 1113455 899999999999
Q ss_pred HHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE
Q 022909 83 GTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 83 G~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li 162 (290)
|+.+|++++.+|++|++|||++++. +. ..+. ..++++++++||+|++|+|.++++++++ +++.++.||+++++|
T Consensus 158 G~~~A~~l~~~G~~V~~~d~~~~~~--~~-~~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li--~~~~l~~mk~ga~li 231 (331)
T 1xdw_A 158 GRVAAQIFHGMGATVIGEDVFEIKG--IE-DYCT-QVSLDEVLEKSDIITIHAPYIKENGAVV--TRDFLKKMKDGAILV 231 (331)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCCS--CT-TTCE-ECCHHHHHHHCSEEEECCCCCTTTCCSB--CHHHHHTSCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCccHH--HH-hccc-cCCHHHHHhhCCEEEEecCCchHHHHHh--CHHHHhhCCCCcEEE
Confidence 9999999999999999999987653 22 2233 3489999999999999999999999999 677899999999999
Q ss_pred EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 163 DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 163 n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
|+||+.++++++|.++|+++++.....+++..|+.
T Consensus 232 n~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 266 (331)
T 1xdw_A 232 NCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEAS 266 (331)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGG
T ss_pred ECCCcccccHHHHHHHHHhCCceEEEEecCCCCCC
Confidence 99999999999999999999988888888887763
No 52
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.93 E-value=2.5e-27 Score=210.92 Aligned_cols=171 Identities=13% Similarity=0.150 Sum_probs=144.1
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|... ..... +.+. +++|||||+|+
T Consensus 112 ~v~n~pg~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~-~~~~~-~~l~-------------g~~vgIIG~G~ 174 (333)
T 3ba1_A 112 RVTNTPDVLTD--DVADLAIGLILAVLRRICECDKYVRRGAWKFG-DFKLT-TKFS-------------GKRVGIIGLGR 174 (333)
T ss_dssp EEECCCSTTHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGC-CCCCC-CCCT-------------TCCEEEECCSH
T ss_pred EEEECCCcchH--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCcc-ccccc-cccC-------------CCEEEEECCCH
Confidence 34455777776 88999999999999999999999999999632 11112 3444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|+++..+|++|++|||++++.. +.....+++++++++|+|++++|.++++++++ +++.++.|++++++
T Consensus 175 iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell~~aDvVil~vP~~~~t~~li--~~~~l~~mk~gail 247 (333)
T 3ba1_A 175 IGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELASNSDILVVACPLTPETTHII--NREVIDALGPKGVL 247 (333)
T ss_dssp HHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHHHTCSEEEECSCCCGGGTTCB--CHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHHhcCCEEEEecCCChHHHHHh--hHHHHhcCCCCCEE
Confidence 999999999999999999999876532 45556789999999999999999999999998 66778899999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||++|+.++++++|.++|+++++.....+++..++
T Consensus 248 In~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP 282 (333)
T 3ba1_A 248 INIGRGPHVDEPELVSALVEGRLGGAGLDVFEREP 282 (333)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTT
T ss_pred EECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCC
Confidence 99999999999999999999888766666666555
No 53
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=2.3e-25 Score=207.90 Aligned_cols=204 Identities=21% Similarity=0.306 Sum_probs=178.3
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-C-------CccCCCHHHHhhc---CCeEEEEeCChhH
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-G-------AKYQPSPDEVAAS---CDVTFAMLADPES 140 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g-------~~~~~~~~~~~~~---aDivv~~~p~~~~ 140 (290)
|+|||||+|.||+.+|..|...|++|.+|||++++.+.+.+. | +..+.++++++++ +|+|++++|.+..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 579999999999999999999999999999999888777653 5 5667789998875 9999999998778
Q ss_pred HHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHH
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPL 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 220 (290)
++.++ +++.+.++++.+||+++++.+.+...+.+.+.+.+++++++|+++++.....++ .++.+++++..+.++++
T Consensus 82 v~~vl---~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 157 (478)
T 1pgj_A 82 TDSTI---EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPI 157 (478)
T ss_dssp HHHHH---HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHH
T ss_pred HHHHH---HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC-eEeccCCHHHHHHHHHH
Confidence 88887 456677889999999999998888888888888889999999988776555666 56778889999999999
Q ss_pred HHHhCCc-------EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcC
Q 022909 221 LDIMGKS-------RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFS 279 (290)
Q Consensus 221 l~~~G~~-------~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~ 279 (290)
|+.+|.. +.++++.|.+.+.|++.|.+.+.+ ..++|++.++++.|++++++.+++..+.
T Consensus 158 l~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~ 224 (478)
T 1pgj_A 158 VEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWK 224 (478)
T ss_dssp HHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 9999987 677888999999999999888777 9999999999999999999999997543
No 54
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.93 E-value=3.3e-27 Score=210.49 Aligned_cols=172 Identities=14% Similarity=0.099 Sum_probs=144.3
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|+.. +++|++++++|++.|+++.+++.+++|.|.+.... ..+.+. +++|||||+|+
T Consensus 93 ~v~n~p~~~~~--~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~--~~~~l~-------------g~~vgIiG~G~ 155 (333)
T 1dxy_A 93 RLSNVPAYSPA--AIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTF--IGKELG-------------QQTVGVMGTGH 155 (333)
T ss_dssp EEECCTTSCHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCC--CCCCGG-------------GSEEEEECCSH
T ss_pred EEEeCCCCCch--HHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCC--CccCCC-------------CCEEEEECcCH
Confidence 34445778777 88899999999999999999999999998520111 113455 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++.+|++|++|||++++. .. ..... .++++++++||+|++|+|.+++|++++ +++.++.||+++++
T Consensus 156 IG~~~A~~l~~~G~~V~~~d~~~~~~--~~-~~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li--~~~~l~~mk~ga~l 229 (333)
T 1dxy_A 156 IGQVAIKLFKGFGAKVIAYDPYPMKG--DH-PDFDY-VSLEDLFKQSDVIDLHVPGIEQNTHII--NEAAFNLMKPGAIV 229 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSS--CC-TTCEE-CCHHHHHHHCSEEEECCCCCGGGTTSB--CHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchh--hH-hcccc-CCHHHHHhcCCEEEEcCCCchhHHHHh--CHHHHhhCCCCcEE
Confidence 99999999999999999999987643 11 12333 489999999999999999999999999 67789999999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
||+||+.++++++|.++|+++++.....+++..|+
T Consensus 230 In~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 264 (333)
T 1dxy_A 230 INTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYET 264 (333)
T ss_dssp EECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHH
T ss_pred EECCCCcccCHHHHHHHHHhCCccEEEEecCCCCC
Confidence 99999999999999999999988877778887765
No 55
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.93 E-value=5.3e-27 Score=210.50 Aligned_cols=177 Identities=13% Similarity=0.090 Sum_probs=147.2
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCC---CCCCCC--cccccccccccccCCCccccCCCCeEEE
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINS---LPTKPL--FPLSFKVFSSQATGVSAEADELPGRIGF 76 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~---w~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~Igi 76 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|. |..... .... +.+. +++|||
T Consensus 105 ~v~n~p~~~~~--~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~-~~l~-------------g~~vgI 168 (348)
T 2w2k_A 105 AFANSRGAGDT--ATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSA-HNPR-------------GHVLGA 168 (348)
T ss_dssp EEECCTTTTHH--HHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCST-------------TCEEEE
T ss_pred EEEECCCCCcH--HHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccC-cCCC-------------CCEEEE
Confidence 34445777766 8899999999999999999999999999 941100 0111 3344 899999
Q ss_pred EcccHhHHHHHHHHH-HCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccC
Q 022909 77 LGMGIMGTPMAQNLL-KAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGM 155 (290)
Q Consensus 77 iG~G~iG~~la~~l~-~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~ 155 (290)
||+|+||+.+|++++ .+|++|++|||++++.+...+.|+....++++++++||+|++|+|.++++++++ +++.++.|
T Consensus 169 IG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li--~~~~l~~m 246 (348)
T 2w2k_A 169 VGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLI--DEAFFAAM 246 (348)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCB--CHHHHHHS
T ss_pred EEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHh--hHHHHhcC
Confidence 999999999999999 999999999999876655555577766689999999999999999999999998 56778899
Q ss_pred CCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 156 GPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 156 ~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
+++++|||++|+.++++++|.++|+++.+.....+++..++
T Consensus 247 k~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP 287 (348)
T 2w2k_A 247 KPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP 287 (348)
T ss_dssp CTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT
T ss_pred CCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC
Confidence 99999999999999999999999998777666677777654
No 56
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.93 E-value=1.5e-26 Score=206.57 Aligned_cols=176 Identities=9% Similarity=0.021 Sum_probs=144.7
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCC----CCCCcccccccccccccCCCccccCCCCeEEEE
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLP----TKPLFPLSFKVFSSQATGVSAEADELPGRIGFL 77 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Igii 77 (290)
.+...|+|... +++|++++++|++.|+++.+++.+++|.|. .+.......+.+. +++||||
T Consensus 92 ~v~n~~~~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~-------------g~~vgII 156 (334)
T 2dbq_A 92 YVTNTPDVLTD--ATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVY-------------GKTIGII 156 (334)
T ss_dssp EEECCCSTTHH--HHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCT-------------TCEEEEE
T ss_pred EEEeCCCcCHH--HHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCC-------------CCEEEEE
Confidence 34445777666 889999999999999999999999999995 2111111113444 8999999
Q ss_pred cccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCC
Q 022909 78 GMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGP 157 (290)
Q Consensus 78 G~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~ 157 (290)
|+|.||+.+|+.++.+|++|++|||++++ +...+.|+.. .+++++++++|+|++|+|.+.++++++ +++.++.|++
T Consensus 157 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i--~~~~~~~mk~ 232 (334)
T 2dbq_A 157 GLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLI--NEERLKLMKK 232 (334)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCB--CHHHHHHSCT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhh--CHHHHhcCCC
Confidence 99999999999999999999999999876 4444556665 489999999999999999999899988 5567889999
Q ss_pred CCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 158 GKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 158 ~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
++++||+||+.++++++|.++++++.+.....+++..++
T Consensus 233 ~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP 271 (334)
T 2dbq_A 233 TAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP 271 (334)
T ss_dssp TCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS
T ss_pred CcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC
Confidence 999999999999999999999999888776666776654
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.92 E-value=1.3e-25 Score=211.94 Aligned_cols=204 Identities=13% Similarity=0.119 Sum_probs=157.9
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|+++|+++++++.+++|.|.+.. + .. .++. +++|||||+|+
T Consensus 91 ~v~n~p~~~~~--~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~-~-~~-~~l~-------------g~~vgIIG~G~ 152 (529)
T 1ygy_A 91 LVVNAPTSNIH--SAAEHALALLLAASRQIPAADASLREHTWKRSS-F-SG-TEIF-------------GKTVGVVGLGR 152 (529)
T ss_dssp EEECCTTSSHH--HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGG-C-CB-CCCT-------------TCEEEEECCSH
T ss_pred EEEECCCcchH--HHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccC-c-Cc-cccC-------------CCEEEEEeeCH
Confidence 34445666666 889999999999999999999999999997421 1 11 3444 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEE
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY 161 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 161 (290)
||+.+|++++++|++|++||+++. .+...+.|+... ++++++++||+|++|+|.++++++++ +++.++.|++++++
T Consensus 153 IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i--~~~~~~~~k~g~il 228 (529)
T 1ygy_A 153 IGQLVAQRIAAFGAYVVAYDPYVS-PARAAQLGIELL-SLDDLLARADFISVHLPKTPETAGLI--DKEALAKTKPGVII 228 (529)
T ss_dssp HHHHHHHHHHTTTCEEEEECTTSC-HHHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCB--CHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHh--CHHHHhCCCCCCEE
Confidence 999999999999999999999874 344455677765 89999999999999999998999998 55678899999999
Q ss_pred EEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccc----cCCceEEEe---c-CCHHHHHH-----HHHHHHHhCCc
Q 022909 162 VDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPA----EDGQLIFLA---A-GDKSLYNT-----VAPLLDIMGKS 227 (290)
Q Consensus 162 in~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~----~~~~~~~~~---~-~~~~~~~~-----v~~ll~~~G~~ 227 (290)
||++++.++++.+|.++++++++.....++++.+|.. ...+.++++ + .+.++.+. ++++.+.++..
T Consensus 229 in~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 229 VNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp EECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999877665555556555432 122334444 2 34555543 55666666543
No 58
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.92 E-value=4.4e-24 Score=195.31 Aligned_cols=202 Identities=13% Similarity=0.068 Sum_probs=168.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC------------------CCccCCCHHHHhhcCCeEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL------------------GAKYQPSPDEVAASCDVTF 132 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~------------------g~~~~~~~~~~~~~aDivv 132 (290)
.|+|+|||+|.||..+|..|+. |++|++||+++++.+.+.+. ++..+++++++++++|+|+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi 114 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVI 114 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence 5899999999999999999988 99999999999887766541 3556678889999999999
Q ss_pred EEeCChh----------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCc
Q 022909 133 AMLADPE----------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQ 202 (290)
Q Consensus 133 ~~~p~~~----------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~ 202 (290)
+++|.+. .++.++ +.+.+ +++++++|+.|+..+...+.+.+.+.+.+ ++.+|.+..+..+..+.
T Consensus 115 iaVPt~~~~~~~~~Dl~~V~~v~---~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~--v~~sPe~~~~G~A~~~~ 188 (432)
T 3pid_A 115 IATPTDYDPKTNYFNTSTVEAVI---RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDN--VIFSPEFLREGRALYDN 188 (432)
T ss_dssp ECCCCEEETTTTEEECHHHHHHH---HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCC--EEECCCCCCTTSHHHHH
T ss_pred EeCCCccccccccccHHHHHHHH---HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhcc--EeecCccCCcchhhhcc
Confidence 9999863 344544 45667 89999999999999999999998887653 45599998877654333
Q ss_pred e---EEEecCCHHHHHHHHHHHHH--hCC-cEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHH
Q 022909 203 L---IFLAAGDKSLYNTVAPLLDI--MGK-SRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFL 275 (290)
Q Consensus 203 ~---~~~~~~~~~~~~~v~~ll~~--~G~-~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i 275 (290)
+ .+++|++++..+.+.++|.. ++. .++++++.+.|++.|++.|.+.+.. ..++|+..+|++.|+|++++.+++
T Consensus 189 l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 189 LHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQIIEGV 268 (432)
T ss_dssp HSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3 67888888888999999987 443 2466788999999999999999998 999999999999999999999999
Q ss_pred hhcC
Q 022909 276 QSFS 279 (290)
Q Consensus 276 ~~~~ 279 (290)
..-.
T Consensus 269 ~~dp 272 (432)
T 3pid_A 269 CLDP 272 (432)
T ss_dssp HTST
T ss_pred ccCC
Confidence 7543
No 59
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.92 E-value=2.2e-24 Score=186.66 Aligned_cols=197 Identities=18% Similarity=0.273 Sum_probs=161.9
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeC--CccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNR--TKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~--~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
|+|+|||+|+||..+++.|...|++|++||+ +++..+.+.+.|+. ++.+++++++|+|++++|.+...+.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~---- 74 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAAR---- 74 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHHH----
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHHH----
Confidence 5799999999999999999999999999998 55556666666766 678888999999999999866665542
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 229 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 229 (290)
++.+.+++ ++|+++++.+.+.+.+.+.+.+.+ |+++|+++++.....+.+ ++++++++ +.+++ |+.+|+.++
T Consensus 75 ~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~~~ 146 (264)
T 1i36_A 75 RAGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLNIE 146 (264)
T ss_dssp HHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCEEE
T ss_pred HHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCeeE
Confidence 34556666 999999998888888888887665 888899887665555666 66666655 78888 999999888
Q ss_pred EeCC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCc
Q 022909 230 YLGD-VGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFSFGNL 283 (290)
Q Consensus 230 ~~~~-~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~ 283 (290)
++++ .+.+.+.|++.|.+.+.+ ..+.|++.++++.|++++ +.+.+.++.+.++
T Consensus 147 ~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~ 201 (264)
T 1i36_A 147 VRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDF 201 (264)
T ss_dssp ECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSST
T ss_pred ECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccH
Confidence 8887 799999999999887777 999999999999999997 7788888763343
No 60
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.92 E-value=6.6e-24 Score=195.67 Aligned_cols=206 Identities=15% Similarity=0.102 Sum_probs=170.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC--------------------CCccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--------------------GAKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~aDi 130 (290)
.-+|+|||+|.||..+|..|+..|++|++||+++++.+.+.+. ++..++++.+++++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 4789999999999999999999999999999999988877552 24556788899999999
Q ss_pred EEEEeCChh----------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcC----CcEEeCccCCCCc
Q 022909 131 TFAMLADPE----------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG----ASFLEAPVSGSKK 196 (290)
Q Consensus 131 vv~~~p~~~----------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~----~~~~~~p~~~~~~ 196 (290)
|++|+|.+. .++.++ +.+.+.+++++++|+.|+..+...+.+.+.+.+.+ ..++..|.+..+.
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG 164 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAA---REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREG 164 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHH---HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTT
T ss_pred EEEEcCCCCccccCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCccccccc
Confidence 999998874 366666 45678899999999999999999999988887753 5566677665544
Q ss_pred ccc---CCceEEEecC-CHHHHHHHHHHHHHhCCc---EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCH
Q 022909 197 PAE---DGQLIFLAAG-DKSLYNTVAPLLDIMGKS---RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLI 268 (290)
Q Consensus 197 ~~~---~~~~~~~~~~-~~~~~~~v~~ll~~~G~~---~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~ 268 (290)
... ..+..+++|+ ++++.+.++++++.++.. ++++++.+.++..|++.|.+.+.. .+++|+..+|++.|+|+
T Consensus 165 ~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~GiD~ 244 (446)
T 4a7p_A 165 AAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCEQVGADV 244 (446)
T ss_dssp SHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred chhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 320 1122455665 478899999999998874 578899999999999999999999 99999999999999999
Q ss_pred HHHHHHHhhcC
Q 022909 269 NTVTMFLQSFS 279 (290)
Q Consensus 269 ~~~~~~i~~~~ 279 (290)
+++.+++..-.
T Consensus 245 ~~v~~~~~~~~ 255 (446)
T 4a7p_A 245 QEVSRGIGMDN 255 (446)
T ss_dssp HHHHHHHHTST
T ss_pred HHHHHHHhcCC
Confidence 99999998865
No 61
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.92 E-value=4.1e-26 Score=203.55 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=141.9
Q ss_pred eeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccc---cccccccccCCCccccCCCCeEEEEcc
Q 022909 3 LLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLS---FKVFSSQATGVSAEADELPGRIGFLGM 79 (290)
Q Consensus 3 ~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~IgiiG~ 79 (290)
+...|+|... +++|++++++|++.|+++.+++.+++|.|......... .+.+. +++|||||+
T Consensus 90 v~n~~~~~~~--~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~-------------g~~vgIIG~ 154 (333)
T 2d0i_A 90 VTKVSGLLSE--AVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLY-------------GKKVGILGM 154 (333)
T ss_dssp EECCCHHHHH--HHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCST-------------TCEEEEECC
T ss_pred EEeCCCcChH--HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCC-------------cCEEEEEcc
Confidence 4445677666 88899999999999999999999999999631100000 02333 899999999
Q ss_pred cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCC
Q 022909 80 GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGK 159 (290)
Q Consensus 80 G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~ 159 (290)
|.||+.+|+.++.+|++|++|||++++ +...+.|+... ++++++++||+|++|+|.++++++++ +++.++.|+++
T Consensus 155 G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i--~~~~~~~mk~g- 229 (333)
T 2d0i_A 155 GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDTYHII--NEERVKKLEGK- 229 (333)
T ss_dssp SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSB--CHHHHHHTBTC-
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHHHHHh--CHHHHhhCCCC-
Confidence 999999999999999999999999875 44444566554 89999999999999999998999998 55678889999
Q ss_pred EEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 160 GYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 160 ~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
++||+||+.+++++++.++++++.+.....++++.++
T Consensus 230 ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP 266 (333)
T 2d0i_A 230 YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEP 266 (333)
T ss_dssp EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSS
T ss_pred EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCC
Confidence 9999999999999999999998877766667776554
No 62
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.92 E-value=3e-24 Score=200.19 Aligned_cols=207 Identities=15% Similarity=0.152 Sum_probs=165.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHh-------------------CCCccCCCHHHHhhcCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLIS-------------------LGAKYQPSPDEVAASCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~~~~~~~~aD 129 (290)
.|+|+|||+|.||..+|..|+.. |++|++||+++++.+.+.+ .++..+++++++++++|
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 47999999999999999999988 8999999999887766432 23555678888899999
Q ss_pred eEEEEeCChhHH--------------HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCC
Q 022909 130 VTFAMLADPESA--------------MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 195 (290)
Q Consensus 130 ivv~~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~ 195 (290)
+|++|+|.+... .... +++.+.+++++++|+.|+..+...+.+.+.+++.+..+++.++...+
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~P 161 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACA---RRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNP 161 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHH---HHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCH
Confidence 999999876542 2232 34566789999999999999999988988888765434444444444
Q ss_pred ccccCCceE--------EEecC-----CHHHHHHHHHHHHHh-CCcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHH
Q 022909 196 KPAEDGQLI--------FLAAG-----DKSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLT 260 (290)
Q Consensus 196 ~~~~~~~~~--------~~~~~-----~~~~~~~v~~ll~~~-G~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l 260 (290)
.....+... +++++ +++..+.++++++.+ |..++++++.+.+.+.|++.|.+.+.+ ..++|+..+
T Consensus 162 e~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l 241 (467)
T 2q3e_A 162 EFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISAL 241 (467)
T ss_dssp CCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334332 45565 678889999999999 777888999999999999999998888 999999999
Q ss_pred HHHCCCCHHHHHHHHhhcCC
Q 022909 261 LEFVDFLINTVTMFLQSFSF 280 (290)
Q Consensus 261 ~~~~G~~~~~~~~~i~~~~~ 280 (290)
+++.|+|++++.+++.....
T Consensus 242 ~~~~Gid~~~v~~~~~~~~~ 261 (467)
T 2q3e_A 242 CEATGADVEEVATAIGMDQR 261 (467)
T ss_dssp HHHHTCCHHHHHHHHHTSTT
T ss_pred HHHhCcCHHHHHHHHcCCCC
Confidence 99999999999999998654
No 63
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.91 E-value=2.7e-23 Score=192.39 Aligned_cols=206 Identities=17% Similarity=0.150 Sum_probs=167.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC--------------------CCccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--------------------GAKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~aDi 130 (290)
.|+|+|||+|.||..+|..|+..|++|++||+++++.+.+.+. ++..+++++++++++|+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 4799999999999999999999999999999999887776551 23456788889999999
Q ss_pred EEEEeCChh---------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcC--------CcEEeCccCC
Q 022909 131 TFAMLADPE---------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG--------ASFLEAPVSG 193 (290)
Q Consensus 131 vv~~~p~~~---------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~--------~~~~~~p~~~ 193 (290)
|++++|.+. .++.++ +++.+.+++++++|+.|+..+...+.+.+.+.+.+ ..++..|.+.
T Consensus 82 ViiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a 158 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSYVLDAA---RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFL 158 (450)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCC
T ss_pred EEEEcCCCcccCCCcChHHHHHHH---HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhh
Confidence 999999864 566666 45677889999999999999999888888776531 3445567665
Q ss_pred CCcccc---CCceEEEec-CCHHHHHHHHHHHHHhCC--cEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCC
Q 022909 194 SKKPAE---DGQLIFLAA-GDKSLYNTVAPLLDIMGK--SRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDF 266 (290)
Q Consensus 194 ~~~~~~---~~~~~~~~~-~~~~~~~~v~~ll~~~G~--~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~ 266 (290)
.+.... ..+..+++| .++++.+.++++++.++. .++++++.+.+++.|++.|.+.+++ .+++|+..+|++.|+
T Consensus 159 ~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gi 238 (450)
T 3gg2_A 159 KEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCERVGA 238 (450)
T ss_dssp CTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 443321 112234555 468899999999999986 3678889999999999999999999 999999999999999
Q ss_pred CHHHHHHHHhhcC
Q 022909 267 LINTVTMFLQSFS 279 (290)
Q Consensus 267 ~~~~~~~~i~~~~ 279 (290)
|++++.+++....
T Consensus 239 d~~~v~~~~~~~~ 251 (450)
T 3gg2_A 239 DVSMVRLGIGSDS 251 (450)
T ss_dssp CHHHHHHHHHTST
T ss_pred CHHHHHHHHcCCC
Confidence 9999999999764
No 64
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.91 E-value=8e-24 Score=196.22 Aligned_cols=208 Identities=18% Similarity=0.133 Sum_probs=169.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CC-eEEEEeCCcc----chhhHHhC---------------------C-CccCCCHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GC-DVTVWNRTKS----KCDPLISL---------------------G-AKYQPSPD 122 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~-~V~~~d~~~~----~~~~~~~~---------------------g-~~~~~~~~ 122 (290)
.|+|+|||+|.||..+|..|+.. |+ +|++||++++ +.+.+.+. + +..+++ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 58999999999999999999999 99 9999999998 66655431 1 233445 6
Q ss_pred HHhhcCCeEEEEeCChh--------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHH--HcC------CcE
Q 022909 123 EVAASCDVTFAMLADPE--------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK--ATG------ASF 186 (290)
Q Consensus 123 ~~~~~aDivv~~~p~~~--------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~--~~~------~~~ 186 (290)
++++++|+|++++|.+. ++..+....+.+.+.+++++++|+.|+..+...+.+.+.+. ..+ +.+
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~v 176 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFAL 176 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBEE
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCceeE
Confidence 78899999999999873 33333322355677899999999999999999988876432 233 467
Q ss_pred EeCccCCCCccccCC---ceEEEecCCHHHHHHHHHHHHHh-CCcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 022909 187 LEAPVSGSKKPAEDG---QLIFLAAGDKSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTL 261 (290)
Q Consensus 187 ~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~ll~~~-G~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~ 261 (290)
+++|.+..+..+..+ +..++.|++++..+.++++++.+ +..++++++.+.++..|++.|.+.+.. ..++|+..+|
T Consensus 177 ~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~Ia~~nE~~~l~ 256 (478)
T 3g79_A 177 AHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYC 256 (478)
T ss_dssp EECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889988766554222 22567888999999999999999 888999999999999999999999998 9999999999
Q ss_pred HHCCCCHHHHHHHHhhcC
Q 022909 262 EFVDFLINTVTMFLQSFS 279 (290)
Q Consensus 262 ~~~G~~~~~~~~~i~~~~ 279 (290)
++.|+|++++.++++.-.
T Consensus 257 e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 257 EAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHTTCCHHHHHHHHHTSC
T ss_pred HHcCCCHHHHHHHHCCCc
Confidence 999999999999998754
No 65
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.90 E-value=6.2e-23 Score=187.98 Aligned_cols=209 Identities=14% Similarity=0.108 Sum_probs=168.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-CCHHHH---------------hhcCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-PSPDEV---------------AASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-~~~~~~---------------~~~aDivv~~ 134 (290)
+.++.|||+|.||..+|..|+..|++|++||+++++.+.+.+...... ..++++ +++||+|++|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~ 90 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIA 90 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEEC
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEE
Confidence 789999999999999999999999999999999999888776322111 122222 3579999999
Q ss_pred eCChhH--------HHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHH-cC------CcEEeCccCCCCcccc
Q 022909 135 LADPES--------AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA-TG------ASFLEAPVSGSKKPAE 199 (290)
Q Consensus 135 ~p~~~~--------~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~-~~------~~~~~~p~~~~~~~~~ 199 (290)
+|++.. ++.+....+.+.+.+++++++|+.|+..+...+++.+.+.+ .+ +.++++|.+..+..+.
T Consensus 91 VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~ 170 (431)
T 3ojo_A 91 VPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKIL 170 (431)
T ss_dssp CCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHH
T ss_pred eCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchh
Confidence 998762 22333223567788999999999999999999998876544 44 3678899887665432
Q ss_pred C---CceEEEecCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHH
Q 022909 200 D---GQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMFL 275 (290)
Q Consensus 200 ~---~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i 275 (290)
. .+..++.|+++++.+.++++++.++..++++++.+.|++.|+++|.+.+.. +.++|+..+|++.|+|++++.+++
T Consensus 171 ~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 171 EELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2 233567888899999999999999988888899999999999999999998 999999999999999999999999
Q ss_pred hhcC
Q 022909 276 QSFS 279 (290)
Q Consensus 276 ~~~~ 279 (290)
+.-.
T Consensus 251 ~~~~ 254 (431)
T 3ojo_A 251 NKHP 254 (431)
T ss_dssp TTST
T ss_pred ccCC
Confidence 8654
No 66
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.89 E-value=1.5e-24 Score=194.84 Aligned_cols=153 Identities=11% Similarity=0.072 Sum_probs=128.6
Q ss_pred eeeeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccH
Q 022909 2 TLLVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGI 81 (290)
Q Consensus 2 ~~~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~ 81 (290)
.+...|+|... +++|++++++|++.|+. | ..+. +++|||||+|+
T Consensus 86 ~v~n~pg~~~~--~VAE~~l~~lL~l~r~~---------g------------~~l~-------------gktvGIIGlG~ 129 (381)
T 3oet_A 86 GFSAAPGCNAI--AVVEYVFSALLMLAERD---------G------------FSLR-------------DRTIGIVGVGN 129 (381)
T ss_dssp EEECCTTTTHH--HHHHHHHHHHHHHHHHT---------T------------CCGG-------------GCEEEEECCSH
T ss_pred EEEECCCcCcc--hhHHHHHHHHHHHHHhc---------C------------CccC-------------CCEEEEEeECH
Confidence 45556777776 88888888888877752 1 1233 89999999999
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhH----HHHHhcccccccccCCC
Q 022909 82 MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPES----AMDVACGKHGAASGMGP 157 (290)
Q Consensus 82 iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~----~~~~~~~~~~~~~~~~~ 157 (290)
||+.+|+++.++|++|++||++.+.. .. .....++++++++||+|++|+|.+++ |++++ +++.++.||+
T Consensus 130 IG~~vA~~l~a~G~~V~~~d~~~~~~----~~-~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li--~~~~l~~mk~ 202 (381)
T 3oet_A 130 VGSRLQTRLEALGIRTLLCDPPRAAR----GD-EGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLA--DETLIRRLKP 202 (381)
T ss_dssp HHHHHHHHHHHTTCEEEEECHHHHHT----TC-CSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSB--CHHHHHHSCT
T ss_pred HHHHHHHHHHHCCCEEEEECCChHHh----cc-CcccCCHHHHHhhCCEEEEcCcCCccccccchhhc--CHHHHhcCCC
Confidence 99999999999999999999854321 12 23456899999999999999999999 99999 7788999999
Q ss_pred CCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcc
Q 022909 158 GKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKP 197 (290)
Q Consensus 158 ~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~ 197 (290)
|+++||+||+.++++++|.++|+++++.....+++..|+.
T Consensus 203 gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~ 242 (381)
T 3oet_A 203 GAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPD 242 (381)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTS
T ss_pred CcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCC
Confidence 9999999999999999999999999998888888887764
No 67
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.89 E-value=1.3e-22 Score=179.78 Aligned_cols=204 Identities=10% Similarity=0.050 Sum_probs=153.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----------CC--------------CccCCCHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----------LG--------------AKYQPSPDEVA 125 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----------~g--------------~~~~~~~~~~~ 125 (290)
.++|+|||+|.||..+|..|+..|++|++||+++++.+.+.+ .| +..++++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 478999999999999999999999999999999987665532 23 34567899999
Q ss_pred hcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccCCceE
Q 022909 126 ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAEDGQLI 204 (290)
Q Consensus 126 ~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~ 204 (290)
++||+|++++|.+.+.+..++ +++.+.++++++|++.+++.+. ..+.+.+... .+++. +|+.. +. ..+++
T Consensus 86 ~~aDlVieavpe~~~~k~~v~--~~l~~~~~~~~Ii~s~tS~i~~--~~la~~~~~~-~r~ig~Hp~~P-~~---~~~lv 156 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLP--SKLFTGLAHV-KQCIVAHPVNP-PY---YIPLV 156 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCH--HHHHTTCTTG-GGEEEEEECSS-TT---TCCEE
T ss_pred hcCCEEEEeccCCHHHHHHHH--HHHHhhCCCCeEEEEeCCChHH--HHHHHhcCCC-CCeEEeecCCc-hh---hcceE
Confidence 999999999998776655442 4566788999999866554333 3555555332 23444 33321 11 12233
Q ss_pred -EEec--CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCC
Q 022909 205 -FLAA--GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFG 281 (290)
Q Consensus 205 -~~~~--~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~g 281 (290)
++.+ ++++.++.+.++++.+|+.+++++..+.+. ++++++. ..++|++.++++.|++++++++++...++.
T Consensus 157 eiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gf---i~Nrll~---a~~~EA~~l~~~g~~~~~~id~a~~~g~g~ 230 (319)
T 2dpo_A 157 ELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF---VLNRLQY---AIISEAWRLVEEGIVSPSDLDLVMSDGLGM 230 (319)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT---THHHHHH---HHHHHHHHHHHTTSSCHHHHHHHHHTTHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCc---hHHHHHH---HHHHHHHHHHHhCCCCHHHHHHHHHhCCCC
Confidence 3444 578999999999999999999997655554 2344433 457999999999999999999999999999
Q ss_pred CccccCCC
Q 022909 282 NLQYDGNF 289 (290)
Q Consensus 282 s~~~~~~~ 289 (290)
+|.+.|+|
T Consensus 231 ~~a~~GP~ 238 (319)
T 2dpo_A 231 RYAFIGPL 238 (319)
T ss_dssp HHTTSCHH
T ss_pred CccccCHH
Confidence 99999987
No 68
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.88 E-value=4.9e-22 Score=185.65 Aligned_cols=206 Identities=17% Similarity=0.137 Sum_probs=163.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhC-------------------CCccCCCHHHHhhcCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISL-------------------GAKYQPSPDEVAASCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 129 (290)
.|+|+|||+|.||..+|..|+.. |++|++||+++++.+.+.+. ++..++++.+.++++|
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999987 79999999999887766542 2344556778889999
Q ss_pred eEEEEeCChh--------------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHH-cC----C--cEEe
Q 022909 130 VTFAMLADPE--------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA-TG----A--SFLE 188 (290)
Q Consensus 130 ivv~~~p~~~--------------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~-~~----~--~~~~ 188 (290)
+|++++|.+. .+..++ +.+.+.+++++++|+.|+..+...+.+.+.+.+ .+ . .+..
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~ 165 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVS---RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLS 165 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEE
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHH---HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEe
Confidence 9999998764 255554 456677899999999999999999888888877 44 2 2455
Q ss_pred CccCCCCcccc---CCceEEEecCCH-----HHHHHHHHHHHHhCC-cEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHH
Q 022909 189 APVSGSKKPAE---DGQLIFLAAGDK-----SLYNTVAPLLDIMGK-SRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSF 258 (290)
Q Consensus 189 ~p~~~~~~~~~---~~~~~~~~~~~~-----~~~~~v~~ll~~~G~-~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~ 258 (290)
+|.+..+.... ..+..+++|+++ ++.+.++++++.++. .++++++.+.+++.|++.|.+.+.+ ..++|+.
T Consensus 166 ~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~ 245 (481)
T 2o3j_A 166 NPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSIS 245 (481)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665544321 111123444432 577889999999996 7888899999999999999999888 9999999
Q ss_pred HHHHHCCCCHHHHHHHHhhcC
Q 022909 259 LTLEFVDFLINTVTMFLQSFS 279 (290)
Q Consensus 259 ~l~~~~G~~~~~~~~~i~~~~ 279 (290)
.+|++.|+|++++.+++....
T Consensus 246 ~la~~~Gid~~~v~~~~~~~~ 266 (481)
T 2o3j_A 246 AVCEATGAEISEVAHAVGYDT 266 (481)
T ss_dssp HHHHHHSCCHHHHHHHHHTST
T ss_pred HHHHHhCcCHHHHHHHHccCC
Confidence 999999999999999998864
No 69
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.88 E-value=3.7e-22 Score=184.59 Aligned_cols=203 Identities=17% Similarity=0.085 Sum_probs=158.9
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-------------------C-CccCCCHHHHhhcCCeE
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-------------------G-AKYQPSPDEVAASCDVT 131 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-------------------g-~~~~~~~~~~~~~aDiv 131 (290)
|+|+|||+|.||..+|..|+..|++|++||+++++.+.+.+. + +..+++++++++++|+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 589999999999999999999999999999999887776552 2 44566888889999999
Q ss_pred EEEeCChhH---------HHHHhcccccccccCCC---CCEEEEecCCChhH-HHHHHHHHHHc-CCc------EEeCcc
Q 022909 132 FAMLADPES---------AMDVACGKHGAASGMGP---GKGYVDVSTVDGDT-SKLINGHIKAT-GAS------FLEAPV 191 (290)
Q Consensus 132 v~~~p~~~~---------~~~~~~~~~~~~~~~~~---~~~lin~s~~~~~~-~~~l~~~l~~~-~~~------~~~~p~ 191 (290)
++|+|.+.. ++.++ +++.+.+++ ++++|+.|+..+.. .+.+.+.+++. +.. +...|.
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe 157 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC---REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPE 157 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH---HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCC
T ss_pred EEEcCCCcccCCCcchHHHHHHH---HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcc
Confidence 999998765 66666 445667788 99999999988887 67777777663 432 233444
Q ss_pred CCCCcccc---CCceEEEecC-CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCC
Q 022909 192 SGSKKPAE---DGQLIFLAAG-DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDF 266 (290)
Q Consensus 192 ~~~~~~~~---~~~~~~~~~~-~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~ 266 (290)
+..+.... ..+..++.++ +++..+.++++++.+|..++ .++.+.+.+.|++.|.+.+.+ ..++|+..++++.|+
T Consensus 158 ~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~-~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gi 236 (436)
T 1mv8_A 158 FLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPII-RKTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAVGV 236 (436)
T ss_dssp CCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEE-EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEE-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 43332210 0111234444 48888999999999998554 478899999999999998888 999999999999999
Q ss_pred CHHHHHHHHhhc
Q 022909 267 LINTVTMFLQSF 278 (290)
Q Consensus 267 ~~~~~~~~i~~~ 278 (290)
+.+++.+++...
T Consensus 237 d~~~v~~~~~~~ 248 (436)
T 1mv8_A 237 DGREVMDVICQD 248 (436)
T ss_dssp CHHHHHHHHTTC
T ss_pred CHHHHHHHhcCC
Confidence 999999999863
No 70
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.88 E-value=9.1e-23 Score=176.65 Aligned_cols=206 Identities=15% Similarity=0.170 Sum_probs=155.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCe-EEEEeCCccchhhHHhC-CCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCD-VTVWNRTKSKCDPLISL-GAKYQPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~-V~~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+|+|+|||+|.||..+++.|...|++ |.+|||++++.+.+.+. |+....+++++++++|+|++++|.+ ....++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~--- 85 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL--- 85 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH---
Confidence 57999999999999999999999998 89999999887777663 7777788989899999999999875 557776
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcE
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 228 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~ 228 (290)
+++.+.+++++++|+++++.+.+. +.+.+.+.+..+...|+.+++.........++.+++++.++.++++++.+|+++
T Consensus 86 ~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~ 163 (266)
T 3d1l_A 86 QGIVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAFLKAIASTLSNRV 163 (266)
T ss_dssp HHHHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCCCCTTCCEEEEESSHHHHHHHHHHHHTTCSCE
T ss_pred HHHHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchhhcCCCeEEEecCCHHHHHHHHHHHHhcCCcE
Confidence 345667889999999998877543 444443323334456655543322233334445778899999999999999989
Q ss_pred EEeCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 229 FYLGDVG---NGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 229 ~~~~~~g---~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
+++++.+ ...+.++++|+. ..+..+.|+ ++++.|++++++.+++.+++.+++.+
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 164 YDADSEQRKSLHLAAVFTCNFT-NHMYALAAE--LLKKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EECCHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred EEeCHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 9998764 556788888874 233556676 57899999999999999888765543
No 71
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.88 E-value=7.9e-23 Score=178.60 Aligned_cols=192 Identities=13% Similarity=0.154 Sum_probs=147.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-------CCccCCCHHHHhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-------GAKYQPSPDEVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-------g~~~~~~~~~~~~~aDivv~~~p~~~~~~~ 143 (290)
.++|+|||+|.||..+|..++ .|++|++||+++++.+.+.+. ++..++++++ +++||+||.++|.+.+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~ 89 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKV 89 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHH
Confidence 699999999999999999999 999999999999888777665 5666777876 8999999999999999887
Q ss_pred HhcccccccccCCCCCEEE-EecCCChhHHHHHHHHHHH----cCCcEEeCccCCCCccccCCceEEEecC---CHHHHH
Q 022909 144 VACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKA----TGASFLEAPVSGSKKPAEDGQLIFLAAG---DKSLYN 215 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~li-n~s~~~~~~~~~l~~~l~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 215 (290)
.+++ + ++.+ ++++++ |+|+.++.. +.+.+.. .+.||++ |+. ..+++.++.+ ++++++
T Consensus 90 ~l~~--~-l~~~-~~~IlasntSti~~~~---~a~~~~~~~r~~G~Hf~~-Pv~-------~~~lveiv~g~~t~~~~~~ 154 (293)
T 1zej_A 90 EVLR--E-VERL-TNAPLCSNTSVISVDD---IAERLDSPSRFLGVHWMN-PPH-------VMPLVEIVISRFTDSKTVA 154 (293)
T ss_dssp HHHH--H-HHTT-CCSCEEECCSSSCHHH---HHTTSSCGGGEEEEEECS-STT-------TCCEEEEEECTTCCHHHHH
T ss_pred HHHH--H-HhcC-CCCEEEEECCCcCHHH---HHHHhhcccceEeEEecC-ccc-------cCCEEEEECCCCCCHHHHH
Confidence 7743 2 4555 898884 777766653 3332221 2445554 221 2344445444 889999
Q ss_pred HHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCccccCCC
Q 022909 216 TVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFGNLQYDGNF 289 (290)
Q Consensus 216 ~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~~~~~~~ 289 (290)
.+.++++.+|+.++++++. +++++++. ..++|++.++++ |++++++++++...++.++.+.|+|
T Consensus 155 ~~~~l~~~lGk~~v~v~d~------fi~Nrll~---~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~~~~GP~ 218 (293)
T 1zej_A 155 FVEGFLRELGKEVVVCKGQ------SLVNRFNA---AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLYTLFGPL 218 (293)
T ss_dssp HHHHHHHHTTCEEEEEESS------CHHHHHHH---HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeccc------ccHHHHHH---HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCCCCCCHH
Confidence 9999999999999999865 45555543 457999999999 8899999999998888777666654
No 72
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.87 E-value=4.7e-21 Score=164.22 Aligned_cols=205 Identities=11% Similarity=0.125 Sum_probs=149.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC----eEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC----DVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~----~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~ 145 (290)
.+||+|||+|+||..+++.|...|+ +|.+|||++++.+.+.+ .|+....+.+++++++|+|++++| +...+.++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~ 80 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASII 80 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHH
Confidence 4789999999999999999999998 99999999988888765 588888899999999999999995 46777777
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccCCceEEEe--cCCHHHHHHHHHHHH
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAEDGQLIFLA--AGDKSLYNTVAPLLD 222 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~ll~ 222 (290)
+++.+.+++++++|+++.+-. .+.+.+.+.. +.+++. +|.. +.....+...++. +++++.++.++++|+
T Consensus 81 ---~~l~~~l~~~~~vvs~~~gi~--~~~l~~~~~~-~~~~v~~~p~~--p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 152 (247)
T 3gt0_A 81 ---NEIKEIIKNDAIIVTIAAGKS--IESTENAFNK-KVKVVRVMPNT--PALVGEGMSALCPNEMVTEKDLEDVLNIFN 152 (247)
T ss_dssp ------CCSSCTTCEEEECSCCSC--HHHHHHHHCS-CCEEEEEECCG--GGGGTCEEEEEEECTTCCHHHHHHHHHHHG
T ss_pred ---HHHHhhcCCCCEEEEecCCCC--HHHHHHHhCC-CCcEEEEeCCh--HHHHcCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456777889999986654443 3355555532 344443 3432 2222233344443 367889999999999
Q ss_pred HhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHhhcCCCCcccc
Q 022909 223 IMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLT-LEFVDFLINTVTMFLQSFSFGNLQYD 286 (290)
Q Consensus 223 ~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l-~~~~G~~~~~~~~~i~~~~~gs~~~~ 286 (290)
.+|. ++.+++........+... ..+++..+.|++.. +++.|++++++.+++.+++.|++.+.
T Consensus 153 ~~G~-~~~~~e~~~d~~~a~~g~-gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~ 215 (247)
T 3gt0_A 153 SFGQ-TEIVSEKLMDVVTSVSGS-SPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMV 215 (247)
T ss_dssp GGEE-EEECCGGGHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC-EEEeCHHHccHHHHHhcc-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9998 666665444444333322 22334667788754 89999999999999999999998763
No 73
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.87 E-value=3e-22 Score=175.31 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=158.2
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
.|+|+|||+ |.||..+++.|...|++|.+|||++++.+.+.+.|+... +..++++++|+|++++|.. .++.++ +
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~-~~~~v~---~ 85 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDN-IIEKVA---E 85 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHH-HHHHHH---H
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCch-HHHHHH---H
Confidence 479999999 999999999999999999999999988777777676554 6778889999999999864 477777 4
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE-eCccCCCC------ccccCCc-------eE--EEecCCHHH
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL-EAPVSGSK------KPAEDGQ-------LI--FLAAGDKSL 213 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~-~~p~~~~~------~~~~~~~-------~~--~~~~~~~~~ 213 (290)
++.+.+++++++|++|++.+. ..+.+ + ..+..++ .+|+++.+ +....+. .. +..+++++.
T Consensus 86 ~l~~~l~~~~ivv~~s~~~~~--~~l~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~ 161 (286)
T 3c24_A 86 DIVPRVRPGTIVLILDAAAPY--AGVMP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEH 161 (286)
T ss_dssp HHGGGSCTTCEEEESCSHHHH--HTCSC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHH
T ss_pred HHHHhCCCCCEEEECCCCchh--HHHHh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHH
Confidence 566778899999998776533 22332 2 2357788 68998776 3233341 22 234578889
Q ss_pred HHHHHHHHHHhCC---cEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHH-HHHHCCCCHHHHHHHHhhcCCCCc
Q 022909 214 YNTVAPLLDIMGK---SRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFL-TLEFVDFLINTVTMFLQSFSFGNL 283 (290)
Q Consensus 214 ~~~v~~ll~~~G~---~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~-l~~~~G~~~~~~~~~i~~~~~gs~ 283 (290)
++.++++++.+|. +++++++.+.+.+.+.+.|.....+ ..+.|++. .+++.|++++++.+++.+++.|++
T Consensus 162 ~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~~~~~ 236 (286)
T 3c24_A 162 YAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHLNVEI 236 (286)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999 7888987777777688887555454 88888885 556669999999999998887765
No 74
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.87 E-value=1.2e-22 Score=173.90 Aligned_cols=176 Identities=20% Similarity=0.264 Sum_probs=131.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccc--------------hhhHHh-CCCccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK--------------CDPLIS-LGAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~--------------~~~~~~-~g~~~~~~~~~~~~~aDivv~~~ 135 (290)
.++|+|||+|.||.++|+.|...|++|++|||++++ .+.+.+ .+.....+++++++++|+|++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVilav 98 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVVNAT 98 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEEEcc
Confidence 799999999999999999999999999999999876 333332 34455668899999999999999
Q ss_pred CChhHHHHHhcccccc-cccCCCCCEEEEecCC-----------ChhHHHHHHHHHHH--------cCCcEEeCccCCCC
Q 022909 136 ADPESAMDVACGKHGA-ASGMGPGKGYVDVSTV-----------DGDTSKLINGHIKA--------TGASFLEAPVSGSK 195 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~-~~~~~~~~~lin~s~~-----------~~~~~~~l~~~l~~--------~~~~~~~~p~~~~~ 195 (290)
|.+.. ..++ .++ .+.+ +++++||++.+ .+.....+.+.+.+ +++.++++|+++++
T Consensus 99 p~~~~-~~~~---~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v~~~~ 173 (245)
T 3dtt_A 99 EGASS-IAAL---TAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASLMVDP 173 (245)
T ss_dssp CGGGH-HHHH---HHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHHHHCG
T ss_pred CcHHH-HHHH---HHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHHhcCc
Confidence 87544 4444 122 2334 89999999832 22222233333333 25677778888877
Q ss_pred ccccCCceEEEe-cCCHHHHHHHHHHHHHhCCc-EEEeCCcchHHHHHHHHHHHHHHH
Q 022909 196 KPAEDGQLIFLA-AGDKSLYNTVAPLLDIMGKS-RFYLGDVGNGAAMKLVVNMIMGRS 251 (290)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~v~~ll~~~G~~-~~~~~~~g~a~~~k~~~n~~~~~~ 251 (290)
.....+++.+++ ++++++++.++++|+.+|+. ++++++.+.+..+|++.|++..++
T Consensus 174 ~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 174 GRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp GGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHH
T ss_pred cccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHH
Confidence 655455554554 55689999999999999975 589999999999999999886665
No 75
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.87 E-value=7.7e-21 Score=177.19 Aligned_cols=204 Identities=19% Similarity=0.158 Sum_probs=161.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC--------------------CccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG--------------------AKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g--------------------~~~~~~~~~~~~~aDi 130 (290)
.|+|+|||+|.||..+|..|+..|++|++||+++++.+.+.+.+ +..++++++.++++|+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 59999999999999999999999999999999998887776531 3445677788899999
Q ss_pred EEEEeCCh---------hHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHc---C---C--cEEeCccCC
Q 022909 131 TFAMLADP---------ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT---G---A--SFLEAPVSG 193 (290)
Q Consensus 131 vv~~~p~~---------~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~---~---~--~~~~~p~~~ 193 (290)
|++|+|.+ ..++.++ +.+.+.+++++++|+.|+.++...+.+.+.+.+. + . .++..|.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~ 164 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA---RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFL 164 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCC
T ss_pred EEEEeCCCcccCCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhhh
Confidence 99999986 5677776 4566778999999999988888888777776553 2 2 233455444
Q ss_pred CCccc----cCCceEEEecCC-H----HHHHHHHHHHHHhCC--cEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 022909 194 SKKPA----EDGQLIFLAAGD-K----SLYNTVAPLLDIMGK--SRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTL 261 (290)
Q Consensus 194 ~~~~~----~~~~~~~~~~~~-~----~~~~~v~~ll~~~G~--~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~ 261 (290)
.+... .... .++.|++ + +..+.++++++.++. .++++++.+.+++.|++.|.+.+++ ..++|+..+|
T Consensus 165 ~eG~~~~~~~~p~-~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~la 243 (478)
T 2y0c_A 165 KEGAAVDDFTRPD-RIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLA 243 (478)
T ss_dssp CTTCHHHHHHSCS-CEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeccCCCC-EEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 1111 2344443 5 688899999998765 6788899999999999999999888 9999999999
Q ss_pred HHCCCCHHHHHHHHhhc
Q 022909 262 EFVDFLINTVTMFLQSF 278 (290)
Q Consensus 262 ~~~G~~~~~~~~~i~~~ 278 (290)
++.|+|.+++.+.+...
T Consensus 244 ~~~Gid~~~v~~~i~~~ 260 (478)
T 2y0c_A 244 DRFGADIEAVRRGIGSD 260 (478)
T ss_dssp HHTTCCHHHHHHHHHTS
T ss_pred HHhCCCHHHHHHHHhcC
Confidence 99999999999998754
No 76
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.87 E-value=5.1e-21 Score=175.06 Aligned_cols=201 Identities=13% Similarity=0.039 Sum_probs=159.1
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC------------------ccCCCHHHHhhcCCeEEE
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA------------------KYQPSPDEVAASCDVTFA 133 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~------------------~~~~~~~~~~~~aDivv~ 133 (290)
|+|+|||+|.||..+|..|+. |++|++||+++++.+.+.+.+. ..+++..+.++++|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 589999999999999999999 9999999999988887766543 344567788899999999
Q ss_pred EeCChh----------HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcccc---C
Q 022909 134 MLADPE----------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAE---D 200 (290)
Q Consensus 134 ~~p~~~----------~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~---~ 200 (290)
++|.+. .+..++ +.+.+ +++++++|+.|+.++...+.+.+.+.+. .++.+|.+..+.... .
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~---~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~ 153 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI---KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNL 153 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH---HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHH
T ss_pred ecCCCcccCCCCccHHHHHHHH---HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhccc
Confidence 999864 466666 44566 8899999998899998888888876543 667788776554322 1
Q ss_pred CceEEEecCCH-------HHHHHHHHHHHHhCCc---EEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHH
Q 022909 201 GQLIFLAAGDK-------SLYNTVAPLLDIMGKS---RFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLIN 269 (290)
Q Consensus 201 ~~~~~~~~~~~-------~~~~~v~~ll~~~G~~---~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~ 269 (290)
.+..++.|+++ +..+.+.+++...+.. ++++++.+.+.+.|++.|.+.+.. ..++|+..+|++.|+|.+
T Consensus 154 ~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~ 233 (402)
T 1dlj_A 154 YPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSH 233 (402)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 22224556554 5567778888754332 577889999999999999998888 999999999999999999
Q ss_pred HHHHHHhhcC
Q 022909 270 TVTMFLQSFS 279 (290)
Q Consensus 270 ~~~~~i~~~~ 279 (290)
++.++++.-.
T Consensus 234 ~v~~~~~~~~ 243 (402)
T 1dlj_A 234 MIIQGISYDD 243 (402)
T ss_dssp HHHHHHHTST
T ss_pred HHHHHhccCC
Confidence 9999997543
No 77
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.86 E-value=6.4e-21 Score=168.82 Aligned_cols=181 Identities=15% Similarity=0.221 Sum_probs=145.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHhCCC--ccCCCHHH-HhhcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLISLGA--KYQPSPDE-VAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~~g~--~~~~~~~~-~~~~aDivv~~~p~~~~~~~~~ 145 (290)
.++|+|||+|.||..+|+.|...|+ +|.+|||++++.+.+.+.|+ ...+++++ +++++|+|++++|.. .+..++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~vl 111 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA 111 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHHHHH
Confidence 4899999999999999999999999 99999999988887777776 34567888 899999999999874 566676
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccc--------cCCceEEEec---CCHHH
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPA--------EDGQLIFLAA---GDKSL 213 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~--------~~~~~~~~~~---~~~~~ 213 (290)
+++.+.++++++++|+++......+.+.+.+.. ++++ +|+++++... ..+..++++. ++++.
T Consensus 112 ---~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~ 185 (314)
T 3ggo_A 112 ---KKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKR 185 (314)
T ss_dssp ---HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHH
T ss_pred ---HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHH
Confidence 456777999999999999887777777776643 7777 8998865321 1456666764 56789
Q ss_pred HHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 022909 214 YNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSF 258 (290)
Q Consensus 214 ~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~ 258 (290)
++.++++++.+|.+++++++..+...+.+++.+-..+..++.++.
T Consensus 186 ~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~ 230 (314)
T 3ggo_A 186 LKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL 230 (314)
T ss_dssp HHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998999999888876655544444443
No 78
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.86 E-value=7.3e-21 Score=165.94 Aligned_cols=202 Identities=14% Similarity=0.164 Sum_probs=155.2
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHhCCCc--cCCCHHHHhh-cCCeEEEEeCChhHHHHHhc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLISLGAK--YQPSPDEVAA-SCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~~g~~--~~~~~~~~~~-~aDivv~~~p~~~~~~~~~~ 146 (290)
++|+|||+|.||..+++.|...|+ +|++|||++++.+.+.+.|+. ..++++++++ ++|+|++++|. ..+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~-~~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV-RTFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCH-HHHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCH-HHHHHHH-
Confidence 689999999999999999999998 999999999887777776764 3557888899 99999999986 4666776
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCc----cc----cCCceEEEe---cCCHHHH
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKK----PA----EDGQLIFLA---AGDKSLY 214 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~----~~----~~~~~~~~~---~~~~~~~ 214 (290)
+++.+.+++++++++++++.....+.+.+.+.++ +++ +|+++.+. .. ..+..++++ +++++..
T Consensus 80 --~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~---~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~ 154 (281)
T 2g5c_A 80 --KKLSYILSEDATVTDQGSVKGKLVYDLENILGKR---FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRL 154 (281)
T ss_dssp --HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG---EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHH
T ss_pred --HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccc---ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHH
Confidence 3456678899999999988877777777777652 665 67776432 11 245556666 5678889
Q ss_pred HHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCc
Q 022909 215 NTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFGNL 283 (290)
Q Consensus 215 ~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~ 283 (290)
+.++++++.+|.+++.+++..++.+.+++++....+..++.+++ .+.|++.++...++.+++.+..
T Consensus 155 ~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~ 220 (281)
T 2g5c_A 155 KLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL---IHMSTPEVDLFKYPGGGFKDFT 220 (281)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH---HHHCBTTBCGGGCCTTTGGGC-
T ss_pred HHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcccchHHHHhhccccHHHHh
Confidence 99999999999999889988889999999888765555555655 3346666666666666665543
No 79
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.85 E-value=9.9e-23 Score=183.46 Aligned_cols=150 Identities=12% Similarity=0.087 Sum_probs=124.9
Q ss_pred eeecccccccccCCCCcchhhhccCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHhH
Q 022909 4 LVKSSYSHRFLSSSTPAMSVCSSFCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIMG 83 (290)
Q Consensus 4 ~~~~~y~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~iG 83 (290)
...|+|... +++|++++++|++.|+ |. +.+. +++|||||+|+||
T Consensus 85 ~n~pg~~~~--~vAE~~l~~lL~l~r~------------~~---------~~l~-------------g~tvGIIGlG~IG 128 (380)
T 2o4c_A 85 SSAPGCNAR--GVVDYVLGCLLAMAEV------------RG---------ADLA-------------ERTYGVVGAGQVG 128 (380)
T ss_dssp ECCTTTTHH--HHHHHHHHHHHHHHHH------------HT---------CCGG-------------GCEEEEECCSHHH
T ss_pred EeCCCcChH--HHHHHHHHHHHHHHhh------------hh---------cccC-------------CCEEEEEeCCHHH
Confidence 334666665 7888899998888776 21 1333 8999999999999
Q ss_pred HHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhH----HHHHhcccccccccCCCCC
Q 022909 84 TPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPES----AMDVACGKHGAASGMGPGK 159 (290)
Q Consensus 84 ~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~----~~~~~~~~~~~~~~~~~~~ 159 (290)
+.+|+++..+|++|++||++++.. +.+.. ..++++++++||+|++|+|.+++ |++++ +++.++.||+|+
T Consensus 129 ~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li--~~~~l~~mk~ga 201 (380)
T 2o4c_A 129 GRLVEVLRGLGWKVLVCDPPRQAR----EPDGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLL--DEPRLAALRPGT 201 (380)
T ss_dssp HHHHHHHHHTTCEEEEECHHHHHH----STTSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSB--CHHHHHTSCTTE
T ss_pred HHHHHHHHHCCCEEEEEcCChhhh----ccCcc-cCCHHHHHHhCCEEEEeccCccccccchhhhc--CHHHHhhCCCCc
Confidence 999999999999999999875422 22333 45899999999999999999998 99999 678899999999
Q ss_pred EEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 160 GYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 160 ~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
++||+||+.++++++|.++|+++++.....+++..||
T Consensus 202 ilIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP 238 (380)
T 2o4c_A 202 WLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEP 238 (380)
T ss_dssp EEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTT
T ss_pred EEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCC
Confidence 9999999999999999999999888777677777665
No 80
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.85 E-value=3.3e-21 Score=173.36 Aligned_cols=200 Identities=14% Similarity=0.072 Sum_probs=155.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC--------------CccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG--------------AKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDivv~~~p 136 (290)
.|+|+|||+|.||.++|..|+..|++|.+|+|++++.+.+.+.+ +..+++++++++++|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 47999999999999999999999999999999988877776633 2345688889999999999998
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecCCChhHH----HHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHH
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTS----KLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKS 212 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~----~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 212 (290)
. ..++.++ +++.+.+++++++|+++.+-...+ +.+.+.+....+.++..|.+..+.........++.+.+++
T Consensus 109 ~-~~~~~vl---~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~ 184 (356)
T 3k96_A 109 S-FAFHEVI---TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQ 184 (356)
T ss_dssp H-HHHHHHH---HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHH
T ss_pred H-HHHHHHH---HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHH
Confidence 6 5778877 556778899999999876554332 3344444434456777888776655555555666777889
Q ss_pred HHHHHHHHHHHhCCcEEEeCCcchHHH-----------------HHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHH
Q 022909 213 LYNTVAPLLDIMGKSRFYLGDVGNGAA-----------------MKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTVTMF 274 (290)
Q Consensus 213 ~~~~v~~ll~~~G~~~~~~~~~g~a~~-----------------~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~ 274 (290)
..+.++++|+..+++++...|.-...+ +++..|...+++ .+++|+.+++++.|.+++++..+
T Consensus 185 ~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl 264 (356)
T 3k96_A 185 FSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGL 264 (356)
T ss_dssp HHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTST
T ss_pred HHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhccc
Confidence 999999999999999988877433333 345567777778 99999999999999999988743
No 81
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.84 E-value=3.1e-20 Score=163.46 Aligned_cols=188 Identities=11% Similarity=0.125 Sum_probs=145.3
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
.++|+||| +|.||..+++.|...|++|.+|||+++. +.+++++++|+|++++|. ..+..++ +
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~-------------~~~~~~~~aDvVilavp~-~~~~~vl---~ 83 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA-------------VAESILANADVVIVSVPI-NLTLETI---E 83 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG-------------GHHHHHTTCSEEEECSCG-GGHHHHH---H
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc-------------CHHHHhcCCCEEEEeCCH-HHHHHHH---H
Confidence 47899999 9999999999999999999999988642 466788999999999987 4578887 4
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccCCceEEEec-CCHHHHHHHHHHHHHhCCc
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAEDGQLIFLAA-GDKSLYNTVAPLLDIMGKS 227 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~ll~~~G~~ 227 (290)
++.+.++++++|+++++......+.+.+.+ +.+++. +|+++++.....+..++++. .+++..+.++++++.+|.+
T Consensus 84 ~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~ 160 (298)
T 2pv7_A 84 RLKPYLTENMLLADLTSVKREPLAKMLEVH---TGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAK 160 (298)
T ss_dssp HHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCE
T ss_pred HHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCCE
Confidence 566778999999999888776655555443 356776 79888765444555555553 3677889999999999998
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCC
Q 022909 228 RFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFG 281 (290)
Q Consensus 228 ~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~g 281 (290)
++.+++..+..+.+++++..+.+...+.+++ .+.|++.+.+.++..+++.+
T Consensus 161 ~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l---~~~g~~~~~~~~la~~~f~~ 211 (298)
T 2pv7_A 161 IYQTNATEHDHNMTYIQALRHFSTFANGLHL---SKQPINLANLLALSSPIYRL 211 (298)
T ss_dssp EEECCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTSSCCHHHHHHTCCHHHHH
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHhhcCHHHHH
Confidence 8888887888888888887665545556654 35788887777766665544
No 82
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.84 E-value=7.5e-20 Score=157.63 Aligned_cols=200 Identities=11% Similarity=0.119 Sum_probs=147.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+|+|+|||+|.||+.+++.|...|++|.+|||++++.+.+.+ .|+....+++++++++|+|++++| +.....++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~---- 77 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVL---- 77 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHH----
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHH----
Confidence 479999999999999999999999999999999988777765 478777889999999999999998 66777766
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecC--CHHHHHHHHHHHHHhCCc
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAG--DKSLYNTVAPLLDIMGKS 227 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~ll~~~G~~ 227 (290)
..+++++++|+.+.+... +.+.+.+. .+.+++. ++.+.+.....+...++.++ +++.++.++++++.+| .
T Consensus 78 ---~~l~~~~~vv~~~~~~~~--~~l~~~~~-~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G-~ 149 (259)
T 2ahr_A 78 ---KPLHFKQPIISMAAGISL--QRLATFVG-QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFG-S 149 (259)
T ss_dssp ---TTSCCCSCEEECCTTCCH--HHHHHHHC-TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE-E
T ss_pred ---HHhccCCEEEEeCCCCCH--HHHHHhcC-CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCC-C
Confidence 224478899998654433 24555554 3455665 33343444444555555555 7888999999999999 5
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHhhcCCCCcc
Q 022909 228 RFYLGDVGNGAAMKLVVNMIMGRSCTFSYSF-LTLEFVDFLINTVTMFLQSFSFGNLQ 284 (290)
Q Consensus 228 ~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~-~l~~~~G~~~~~~~~~i~~~~~gs~~ 284 (290)
++++++.....+.++..+.- ++...+.+++ ..+++.|++++++.+++.+++.|++.
T Consensus 150 ~~~~~~~~~d~~~al~g~~~-~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~~~~ 206 (259)
T 2ahr_A 150 TFDISEKDFDTFTALAGSSP-AYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASAS 206 (259)
T ss_dssp EEECCGGGHHHHHHHHTTHH-HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecHHHccHHHHHhccHH-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 78888777777766543211 1122223333 34789999999999999999988873
No 83
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.84 E-value=5e-20 Score=160.94 Aligned_cols=196 Identities=12% Similarity=0.049 Sum_probs=143.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-----------C--------------CccCCCHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-----------G--------------AKYQPSPDEVA 125 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-----------g--------------~~~~~~~~~~~ 125 (290)
.++|+|||+|.||..+|+.++..|++|++||+++++.+.+.+. + +...+++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 4799999999999999999999999999999998876655432 1 35567888999
Q ss_pred hcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEE
Q 022909 126 ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIF 205 (290)
Q Consensus 126 ~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 205 (290)
+++|+||+++|.+.+.+..+. +++.+.+++++++++.+++.. ..++.+.+.+. .+++....+.+. ...+++.
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~--~~l~~~~~~~~il~s~tS~~~--~~~la~~~~~~-~~~ig~h~~~p~---~~~~lve 155 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIY--TKLGELAPAKTIFATNSSTLL--PSDLVGYTGRG-DKFLALHFANHV---WVNNTAE 155 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSC--HHHHHHHHSCG-GGEEEEEECSST---TTSCEEE
T ss_pred ccCCEEEEeccCcHHHHHHHH--HHHHhhCCCCcEEEECCCCCC--HHHHHhhcCCC-cceEEEccCCCc---ccCceEE
Confidence 999999999998766655552 456677899999996554443 34566665432 345552222221 2334444
Q ss_pred EecC---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCC
Q 022909 206 LAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSF 280 (290)
Q Consensus 206 ~~~~---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~ 280 (290)
++.+ +++.++.+.++++.+|+.+++++....+.. +++++. ..+.|++.++++.+++++++++++...++
T Consensus 156 vv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i---~nr~~~---~~~~ea~~l~~~g~~~~~~id~~~~~~~g 227 (283)
T 4e12_A 156 VMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYV---LNSLLV---PLLDAAAELLVDGIADPETIDKTWRIGTG 227 (283)
T ss_dssp EEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTT---HHHHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHC
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEE---ehHHHH---HHHHHHHHHHHhCCCCHHHHHHHHHhccC
Confidence 5544 678999999999999999999855444432 233332 45689999999999999999999987554
No 84
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.84 E-value=2e-20 Score=163.11 Aligned_cols=204 Identities=15% Similarity=0.146 Sum_probs=146.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC---eEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC---DVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~---~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+|+||.++++.|...|+ +|.+|||++++.+.+.+ .|+..+.+..++++++|+|++++| ++..+.++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHHHHH-
Confidence 5899999999999999999999998 99999999998888877 488888899999999999999996 47778877
Q ss_pred cccccccc-CCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccCCceEEEec--CCHHHHHHHHHHHH
Q 022909 147 GKHGAASG-MGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAEDGQLIFLAA--GDKSLYNTVAPLLD 222 (290)
Q Consensus 147 ~~~~~~~~-~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~ll~ 222 (290)
+++.+. +++++++|+++.+-. .+.+.+.+.. +.+++. +|+. +.....+...+..+ .+++.++.++++|+
T Consensus 81 --~~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~-~~~vvr~mPn~--p~~v~~g~~~l~~~~~~~~~~~~~v~~l~~ 153 (280)
T 3tri_A 81 --EELKDILSETKILVISLAVGVT--TPLIEKWLGK-ASRIVRAMPNT--PSSVRAGATGLFANETVDKDQKNLAESIMR 153 (280)
T ss_dssp --HHHHHHHHTTTCEEEECCTTCC--HHHHHHHHTC-CSSEEEEECCG--GGGGTCEEEEEECCTTSCHHHHHHHHHHHG
T ss_pred --HHHHhhccCCCeEEEEecCCCC--HHHHHHHcCC-CCeEEEEecCC--hHHhcCccEEEEeCCCCCHHHHHHHHHHHH
Confidence 445555 778888887765544 3466666643 344554 5643 22223333333323 35788999999999
Q ss_pred HhCCcEEEeCC-cchHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 223 IMGKSRFYLGD-VGNGAAMKLVVNMIMGRSCTFSYSF-LTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 223 ~~G~~~~~~~~-~g~a~~~k~~~n~~~~~~~~~~ea~-~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
.+|+.+ ++.+ ........+... ..++++.+.|++ ..+.+.|++++++.+++.+++.|+..+
T Consensus 154 ~iG~~~-~v~~E~~~d~~talsgs-gpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~~ 216 (280)
T 3tri_A 154 AVGLVI-WVSSEDQIEKIAALSGS-GPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARM 216 (280)
T ss_dssp GGEEEE-ECSSHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HCCCeE-EECCHHHhhHHHHHhcc-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999844 4543 323333222211 112234455665 457899999999999999999998765
No 85
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.83 E-value=1.4e-19 Score=160.99 Aligned_cols=204 Identities=14% Similarity=0.104 Sum_probs=146.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC----CeEEEEeCCcc--chhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG----CDVTVWNRTKS--KCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g----~~V~~~d~~~~--~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
.|+|+|||+|+||..++..|...| ++|.+|+|+++ +.+.+.+.|+....+..++++++|+|++++| +..++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFI 100 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHHH
Confidence 578999999999999999999999 89999999986 6677777788887889999999999999998 6788888
Q ss_pred hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHc--CCcEEe-CccCCCCccccCCceEEEecCC---HHHHHHHH
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT--GASFLE-APVSGSKKPAEDGQLIFLAAGD---KSLYNTVA 218 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~--~~~~~~-~p~~~~~~~~~~~~~~~~~~~~---~~~~~~v~ 218 (290)
+ +++.+.+++++++|+++.+... +.+.+.+.+. ..+++. +|..+.. ...+. .++++++ ++.++.++
T Consensus 101 l---~~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~vv~~~p~~p~~--~~~g~-~v~~~g~~~~~~~~~~v~ 172 (322)
T 2izz_A 101 L---DEIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPRVIRCMTNTPVV--VREGA-TVYATGTHAQVEDGRLME 172 (322)
T ss_dssp H---HHHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCEEEEEECCGGGG--GTCEE-EEEEECTTCCHHHHHHHH
T ss_pred H---HHHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCeEEEEeCCcHHH--HcCCe-EEEEeCCCCCHHHHHHHH
Confidence 7 3456678889999999765543 3466666542 345544 4433222 22333 4454554 78889999
Q ss_pred HHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHhhcCCCCccc
Q 022909 219 PLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSF-LTLEFVDFLINTVTMFLQSFSFGNLQY 285 (290)
Q Consensus 219 ~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~-~l~~~~G~~~~~~~~~i~~~~~gs~~~ 285 (290)
++|+.+|..++ +.+........+.... .+++..+.|++ ..+++.|++++++.+++.+++.|++.+
T Consensus 173 ~ll~~~G~~~~-~~e~~~~~~~a~~g~g-pa~~~~~~eala~a~~~~Gl~~~~a~~l~~~~~~g~~~~ 238 (322)
T 2izz_A 173 QLLSSVGFCTE-VEEDLIDAVTGLSGSG-PAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKM 238 (322)
T ss_dssp HHHHTTEEEEE-CCGGGHHHHHHHTTTH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEE-eCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999998654 4443333333332111 11123345555 346899999999999999999888754
No 86
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.82 E-value=2.3e-19 Score=156.23 Aligned_cols=198 Identities=14% Similarity=0.164 Sum_probs=148.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc--cCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK--YQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~--~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
|+|+|||+|.||..+++.|...|++|.+|||++++.+.+.+.|+. ...+++++ +++|+|++++|. ..+..++ +
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~---~ 75 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL---E 75 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH---H
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH---H
Confidence 579999999999999999999999999999999888777776663 45678888 999999999985 5677777 4
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCcc----c----cCCceEEEec---CCHHHHHHH
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKP----A----EDGQLIFLAA---GDKSLYNTV 217 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~----~----~~~~~~~~~~---~~~~~~~~v 217 (290)
++.+.++++++++++++......+.+.+.+. ++++ +|+.+.+.. . ..+..++++. ++++..+.+
T Consensus 76 ~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~----~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v 151 (279)
T 2f1k_A 76 KLIPHLSPTAIVTDVASVKTAIAEPASQLWS----GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACL 151 (279)
T ss_dssp HHGGGSCTTCEEEECCSCCHHHHHHHHHHST----TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHH
T ss_pred HHHhhCCCCCEEEECCCCcHHHHHHHHHHhC----CEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHH
Confidence 5667788999999998877766555554432 5555 577653321 1 2343444442 467889999
Q ss_pred HHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHhhcCCC
Q 022909 218 APLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFL--INTVTMFLQSFSFG 281 (290)
Q Consensus 218 ~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~--~~~~~~~i~~~~~g 281 (290)
+++|+.+|.+++++++...+.+.+++.|.......++.++ +...|++ .+....++.+++.+
T Consensus 152 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~---~~~~~~~~~~~~~~~l~~~~~~~ 214 (279)
T 2f1k_A 152 RSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQA---CAGEKDGDILKLAQNLASSGFRD 214 (279)
T ss_dssp HHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHH---HHTCSCHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHH---HHhcccccchhHHHhhcCCcccc
Confidence 9999999999999998888999999888755544455554 3566766 56777777666554
No 87
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.82 E-value=1.1e-19 Score=156.88 Aligned_cols=196 Identities=14% Similarity=0.128 Sum_probs=140.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCC-CeEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
|+|+|||+|.||..++..|...| ++|.+|||++++.+.+.+ .|+....+.++++ ++|+|++++| +..++.++ +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---~ 75 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---K 75 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH---T
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH---H
Confidence 57999999999999999999999 999999999988887766 4887777788888 9999999999 78888887 2
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecC--CHHHHHHHHHHHHHhCCc
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAG--DKSLYNTVAPLLDIMGKS 227 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~ll~~~G~~ 227 (290)
++.+ + ++++|+++++-.. +.+.+.+.+ +.+++.. +.+.+.....+...++.++ +++.++.++++++.+|..
T Consensus 76 ~l~~--~-~~ivv~~~~g~~~--~~l~~~~~~-~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~ 148 (263)
T 1yqg_A 76 NIRT--N-GALVLSVAAGLSV--GTLSRYLGG-TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLT 148 (263)
T ss_dssp TCCC--T-TCEEEECCTTCCH--HHHHHHTTS-CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEE
T ss_pred Hhcc--C-CCEEEEecCCCCH--HHHHHHcCC-CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCE
Confidence 3333 5 8899998544332 456565543 4566665 4333444444555566666 778899999999999987
Q ss_pred EEEeC-CcchHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCCCc
Q 022909 228 RFYLG-DVGNGAAMKLVV---NMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFGNL 283 (290)
Q Consensus 228 ~~~~~-~~g~a~~~k~~~---n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs~ 283 (290)
+ +++ +........+.. .++...+..+.|+ +++.|++++++.+++.+++.|++
T Consensus 149 ~-~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~ 204 (263)
T 1yqg_A 149 V-WLDDEEKMHGITGISGSGPAYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAV 204 (263)
T ss_dssp E-ECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHH
T ss_pred E-EeCChhhccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHH
Confidence 6 676 432222222211 1111111333444 78999999999999998888876
No 88
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.82 E-value=4.9e-20 Score=161.40 Aligned_cols=204 Identities=12% Similarity=0.096 Sum_probs=139.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCC--ccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGA--KYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~--~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+|.||..+++.|... |++|.+|||++++.+.+.+.|. ....+++++++++|+|++++|.+ ....++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHH-
Confidence 47999999999999999999987 6899999999888777777666 34567888889999999999864 457777
Q ss_pred cccccccc-CCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCC----ccc----cCCceEEEe---cCCHHH
Q 022909 147 GKHGAASG-MGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSK----KPA----EDGQLIFLA---AGDKSL 213 (290)
Q Consensus 147 ~~~~~~~~-~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~----~~~----~~~~~~~~~---~~~~~~ 213 (290)
+++.+. ++++.+++++++......+.+.+.+.+.+.++++ +|+++.+ ... ..+..++++ +++++.
T Consensus 84 --~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~ 161 (290)
T 3b1f_A 84 --KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNT 161 (290)
T ss_dssp --HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTH
T ss_pred --HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHH
Confidence 345677 8899999999888877777777777654677877 7886532 211 134444443 356788
Q ss_pred HHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCC
Q 022909 214 YNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFG 281 (290)
Q Consensus 214 ~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~g 281 (290)
.+.++++++.+|.+++.+++..+......++..-..+...+.+++ ...|++.+....+..+++.+
T Consensus 162 ~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~---~~~g~~~~~~~~la~~~~~~ 226 (290)
T 3b1f_A 162 IPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQA---GDFSESHEMTKHFAAGGFRD 226 (290)
T ss_dssp HHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH---HHHHHHCTHHHHHCCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHH---HhcccchhhHHhhccccHHh
Confidence 999999999999988888765554443333332222223333333 22343334444554444433
No 89
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=4.2e-19 Score=158.32 Aligned_cols=179 Identities=14% Similarity=0.211 Sum_probs=141.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhc----CCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAAS----CDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~----aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+|.||.++|+.|...|++|++|||++++.+.+.+.|+....++++++++ +|+|++++|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 578999999999999999999999999999999988888878888777888888765 6999999995 6777777
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccc--------cCCceEEEecC---CHH--
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPA--------EDGQLIFLAAG---DKS-- 212 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~--------~~~~~~~~~~~---~~~-- 212 (290)
+++.+ ++++++++|+++.+....+.+.+.+. +.+|++ +|+++++... ..+..++++.+ +++
T Consensus 86 --~~l~~-~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~ 160 (341)
T 3ktd_A 86 --DAVHT-HAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDI 160 (341)
T ss_dssp --HHHHH-HCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCC
T ss_pred --HHHHc-cCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhh
Confidence 33444 48999999999988876666655543 467888 8999876221 23445666654 446
Q ss_pred ------HHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHH
Q 022909 213 ------LYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSY 256 (290)
Q Consensus 213 ------~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~e 256 (290)
.++.+.++++.+|.+++++++..+...+.+++.+-+.+..++..
T Consensus 161 ~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~~ 210 (341)
T 3ktd_A 161 NSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAI 210 (341)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88999999999999999999988999988888766544433333
No 90
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.80 E-value=6.1e-19 Score=155.76 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=145.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC------------CCHHHHhh---cCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ------------PSPDEVAA---SCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~------------~~~~~~~~---~aDivv~~~ 135 (290)
+|+|+|||+|.||..+|..|...|++|++|+|++++.+.+.+.|+... .+.+++.+ ++|+|++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 479999999999999999999999999999999888777766553221 13344444 899999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHc----CCcEEeCccCCCC--ccccCCceEEEe--
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT----GASFLEAPVSGSK--KPAEDGQLIFLA-- 207 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~----~~~~~~~p~~~~~--~~~~~~~~~~~~-- 207 (290)
|. ..+..++ +++.+.+++++++|+++.+.. ..+.+.+.+.+. +..+.+++..++. .....+.+.+..
T Consensus 83 ~~-~~~~~v~---~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~ 157 (316)
T 2ew2_A 83 KA-QQLDAMF---KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENID 157 (316)
T ss_dssp CH-HHHHHHH---HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESS
T ss_pred cc-ccHHHHH---HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecC
Confidence 85 5677777 456677889999999976543 334555555443 1111222233321 112345554442
Q ss_pred cCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHH---------------------HHHH-HHHHHHHHHHHHCC
Q 022909 208 AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI---------------------MGRS-CTFSYSFLTLEFVD 265 (290)
Q Consensus 208 ~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~---------------------~~~~-~~~~ea~~l~~~~G 265 (290)
+++++..+.+.++|+..|..+++.++...+.+.|++.|.. ...+ .++.|+..++++.|
T Consensus 158 ~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G 237 (316)
T 2ew2_A 158 PSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEA 237 (316)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred CCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4467888999999999999998889999999999998853 2445 88999999999999
Q ss_pred CCH--HHHHHHHhh
Q 022909 266 FLI--NTVTMFLQS 277 (290)
Q Consensus 266 ~~~--~~~~~~i~~ 277 (290)
++. +.+.+.+..
T Consensus 238 ~~~~~~~~~~~~~~ 251 (316)
T 2ew2_A 238 IYLDQAEVYTHIVQ 251 (316)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHH
Confidence 986 567677765
No 91
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.79 E-value=3.8e-18 Score=150.28 Aligned_cols=193 Identities=11% Similarity=0.070 Sum_probs=134.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-----------hCC------------------CccCCCH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-----------SLG------------------AKYQPSP 121 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-----------~~g------------------~~~~~~~ 121 (290)
.++|+|||+|.||..+|..|+..|++|++||+++++.+... +.| +...+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 36899999999999999999999999999999987765431 122 3345688
Q ss_pred HHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccC
Q 022909 122 DEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAED 200 (290)
Q Consensus 122 ~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~ 200 (290)
++.++++|+||+++|.+.+.+..+. +++.+.++++++++..+++... .++.+.+.. .-+++. +|+. +.. .
T Consensus 95 ~~~~~~aD~Vi~avp~~~~~~~~v~--~~l~~~~~~~~iv~s~ts~i~~--~~l~~~~~~-~~~~~g~h~~~-P~~---~ 165 (302)
T 1f0y_A 95 ASVVHSTDLVVEAIVENLKVKNELF--KRLDKFAAEHTIFASNTSSLQI--TSIANATTR-QDRFAGLHFFN-PVP---V 165 (302)
T ss_dssp HHHTTSCSEEEECCCSCHHHHHHHH--HHHTTTSCTTCEEEECCSSSCH--HHHHTTSSC-GGGEEEEEECS-STT---T
T ss_pred HHhhcCCCEEEEcCcCcHHHHHHHH--HHHHhhCCCCeEEEECCCCCCH--HHHHHhcCC-cccEEEEecCC-Ccc---c
Confidence 8889999999999998766544331 3456678889988755444332 244443321 123444 3322 111 2
Q ss_pred CceEEEecC---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhh
Q 022909 201 GQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQS 277 (290)
Q Consensus 201 ~~~~~~~~~---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~ 277 (290)
..+..++.+ +++.++.+.++++.+|+.++++++. .+ +++++++. ..++|++.++++.|++++++++++..
T Consensus 166 ~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~-~g---~i~nr~l~---~~~~Ea~~l~~~g~~~~~~id~~~~~ 238 (302)
T 1f0y_A 166 MKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT-PG---FIVNRLLV---PYLMEAIRLYERGDASKEDIDTAMKL 238 (302)
T ss_dssp CCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC-TT---TTHHHHHH---HHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc-cc---ccHHHHHH---HHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 233445554 7899999999999999988888763 22 23344333 45699999999999999999999975
Q ss_pred cC
Q 022909 278 FS 279 (290)
Q Consensus 278 ~~ 279 (290)
..
T Consensus 239 g~ 240 (302)
T 1f0y_A 239 GA 240 (302)
T ss_dssp HH
T ss_pred CC
Confidence 43
No 92
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.78 E-value=1.7e-17 Score=152.69 Aligned_cols=191 Identities=12% Similarity=0.121 Sum_probs=135.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchh--------hHHhCC-------------CccCCCHHHHhhcCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCD--------PLISLG-------------AKYQPSPDEVAASCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~--------~~~~~g-------------~~~~~~~~~~~~~aD 129 (290)
.++|+|||+|.||..+|..++..|++|++||+++++.. .+.+.| +..+++++ .+++||
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aD 132 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCD 132 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCC
Confidence 47899999999999999999999999999999987321 122223 23456775 689999
Q ss_pred eEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecC
Q 022909 130 VTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAG 209 (290)
Q Consensus 130 ivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 209 (290)
+||+++|.+.+.+..++ +++.+.++++++|++.+++.++ .++.+.+.+. .+++....+.+.. ..+++.++.+
T Consensus 133 lVIeAVpe~~~vk~~v~--~~l~~~~~~~aIlasnTSsl~i--~~ia~~~~~p-~r~iG~HffnPv~---~m~LvEIv~g 204 (460)
T 3k6j_A 133 LIVESVIEDMKLKKELF--ANLENICKSTCIFGTNTSSLDL--NEISSVLRDP-SNLVGIHFFNPAN---VIRLVEIIYG 204 (460)
T ss_dssp EEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCH--HHHHTTSSSG-GGEEEEECCSSTT---TCCEEEEECC
T ss_pred EEEEcCCCCHHHHHHHH--HHHHhhCCCCCEEEecCCChhH--HHHHHhccCC-cceEEEEecchhh---hCCEEEEEeC
Confidence 99999998877765552 4567788999999654443332 3454444322 2354422222222 2334445444
Q ss_pred ---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhh
Q 022909 210 ---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQS 277 (290)
Q Consensus 210 ---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~ 277 (290)
++++++.+.++++.+|+.++++++ ..+. ++++++. ..++|++.++++.|++++++++++..
T Consensus 205 ~~Ts~e~~~~~~~l~~~lGk~~v~v~d-~pGf---i~Nril~---~~~~EA~~l~~~~Ga~~e~ID~a~~~ 268 (460)
T 3k6j_A 205 SHTSSQAIATAFQACESIKKLPVLVGN-CKSF---VFNRLLH---VYFDQSQKLMYEYGYLPHQIDKIITN 268 (460)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEESS-CCHH---HHHHHHH---HHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEec-ccHH---HHHHHHH---HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 789999999999999999999987 3332 2333333 44699999999999999999999973
No 93
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.78 E-value=6.7e-18 Score=154.53 Aligned_cols=206 Identities=17% Similarity=0.143 Sum_probs=154.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC--------------------CCccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL--------------------GAKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~aDi 130 (290)
+.+|+|||+|.+|..+|..|+..|++|+++|.++++.+.+.+. .+.++++.++.++++|+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 5789999999999999999999999999999999887665431 23456788899999999
Q ss_pred EEEEeCChhH------HHHHhcccccccccCC---CCCEEEEecCCChhHHHHHHHHH-HHc--C--CcEEeCccCCCCc
Q 022909 131 TFAMLADPES------AMDVACGKHGAASGMG---PGKGYVDVSTVDGDTSKLINGHI-KAT--G--ASFLEAPVSGSKK 196 (290)
Q Consensus 131 vv~~~p~~~~------~~~~~~~~~~~~~~~~---~~~~lin~s~~~~~~~~~l~~~l-~~~--~--~~~~~~p~~~~~~ 196 (290)
+++|+|+|.. +..+....+.+.+.++ ++.++|.-|+..+..++++...+ .+. + ..+..+|.+-.+.
T Consensus 101 ~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PErl~eG 180 (444)
T 3vtf_A 101 TFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPEFLREG 180 (444)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCCCCCTT
T ss_pred eEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCcccccCC
Confidence 9999987531 1122211133344454 57899999999999988765543 332 2 3445577765544
Q ss_pred cc----cCCceEEEecCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHH
Q 022909 197 PA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS-CTFSYSFLTLEFVDFLINTV 271 (290)
Q Consensus 197 ~~----~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~-~~~~ea~~l~~~~G~~~~~~ 271 (290)
.+ ....-+++.+.++.+.+.+.++++.+....+ +.+...|++.|++.|.+.++. +.++|...+|++.|+|.+++
T Consensus 181 ~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~-~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~GiDv~eV 259 (444)
T 3vtf_A 181 SALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKL-VMKPREAELVKYASNVFLALKISFANEVGLLAKRLGVDTYRV 259 (444)
T ss_dssp SHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEE-EechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 32 1122233344567788889999988876554 556789999999999999999 99999999999999999999
Q ss_pred HHHHhh
Q 022909 272 TMFLQS 277 (290)
Q Consensus 272 ~~~i~~ 277 (290)
.+++..
T Consensus 260 ~~a~~~ 265 (444)
T 3vtf_A 260 FEAVGL 265 (444)
T ss_dssp HHHHHT
T ss_pred HHHhcc
Confidence 999986
No 94
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.77 E-value=4.4e-18 Score=146.69 Aligned_cols=192 Identities=14% Similarity=0.172 Sum_probs=132.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC----CeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG----CDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g----~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.|+|+|||+|.||..+++.|...| ++|.+|||++++ .|+....+.+++++++|+|++++| +..++.++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~- 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVL- 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHH-
Confidence 478999999999999999999988 799999999875 467777788899999999999998 46777877
Q ss_pred ccccccccCCCCCEEE-EecCCChhHHHHHHHHHHHc--CCcEEe-CccCCCCccccCCceEEEecC---CHHHHHHHHH
Q 022909 147 GKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKAT--GASFLE-APVSGSKKPAEDGQLIFLAAG---DKSLYNTVAP 219 (290)
Q Consensus 147 ~~~~~~~~~~~~~~li-n~s~~~~~~~~~l~~~l~~~--~~~~~~-~p~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~ 219 (290)
+++.+.++ +.++| ++++..+. .+.+.+.+. .++++. +|... ..+ .++++++ +++.++.+++
T Consensus 76 --~~l~~~l~-~~~vv~~~~gi~~~---~l~~~~~~~~~~v~~~p~~p~~~-----~~g-~~~~~~~~~~~~~~~~~~~~ 143 (262)
T 2rcy_A 76 --NNIKPYLS-SKLLISICGGLNIG---KLEEMVGSENKIVWVMPNTPCLV-----GEG-SFIYCSNKNVNSTDKKYVND 143 (262)
T ss_dssp --HHSGGGCT-TCEEEECCSSCCHH---HHHHHHCTTSEEEEEECCGGGGG-----TCE-EEEEEECTTCCHHHHHHHHH
T ss_pred --HHHHHhcC-CCEEEEECCCCCHH---HHHHHhCCCCcEEEECCChHHHH-----cCC-eEEEEeCCCCCHHHHHHHHH
Confidence 34556664 55454 44444442 455555432 123332 33332 234 4445444 6788999999
Q ss_pred HHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHhhcCCCCcc
Q 022909 220 LLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSF-LTLEFVDFLINTVTMFLQSFSFGNLQ 284 (290)
Q Consensus 220 ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~-~l~~~~G~~~~~~~~~i~~~~~gs~~ 284 (290)
+|+.+|. ++++++........+.... ..++..+.|++ ..+++.|++++.+.+++.+++.+++.
T Consensus 144 ll~~~G~-~~~~~~~~~~~~~a~~~~~-~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~~~~ 207 (262)
T 2rcy_A 144 IFNSCGI-IHEIKEKDMDIATAISGCG-PAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVE 207 (262)
T ss_dssp HHHTSEE-EEECCGGGHHHHHHHTTSH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-EEEeCHHHccHHHHHHccH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999997 8888876555555543211 11113333443 33689999999999999888776653
No 95
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.76 E-value=5.2e-18 Score=158.03 Aligned_cols=193 Identities=15% Similarity=0.101 Sum_probs=140.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----------CC-------------CccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----------LG-------------AKYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 126 (290)
.++|+|||+|.||..+|..++..|++|++||+++++.+.+.+ .| +...++++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 478999999999999999999999999999999987766432 22 23456665 589
Q ss_pred cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEE-EecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEE
Q 022909 127 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIF 205 (290)
Q Consensus 127 ~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~li-n~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 205 (290)
+||+||+++|.+.+.+..++ +++.+.++++++++ |+|+.++. .+.+.+.+ ..+++....+.+.+ ..+++.
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~--~~l~~~~~~~~IlasntSti~i~---~ia~~~~~-p~~~ig~hf~~Pa~---v~~Lve 154 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALF--AQLAEVCPPQTLLTTNTSSISIT---AIAAEIKN-PERVAGLHFFNPAP---VMKLVE 154 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH---HHTTTSSS-GGGEEEEEECSSTT---TCCEEE
T ss_pred CCCEEEEcCCCcHHHHHHHH--HHHHHhhccCcEEEecCCCCCHH---HHHHHccC-ccceEEeeecChhh---hCCeEE
Confidence 99999999999877654442 44667789999984 66665553 44444432 12344422222111 124566
Q ss_pred EecC---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCC
Q 022909 206 LAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSF 280 (290)
Q Consensus 206 ~~~~---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~ 280 (290)
++++ +++.++.+.++++.+|+.++++++.. + +++++++.. .++|++.++++.+.+++++++++...++
T Consensus 155 vv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~-G---fi~Nr~l~~---~~~Ea~~l~~~g~~~~~~id~a~~~~~G 225 (483)
T 3mog_A 155 VVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP-G---FIVNRVARP---YYSEAWRALEEQVAAPEVIDAALRDGAG 225 (483)
T ss_dssp EEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT-T---TTHHHHTHH---HHHHHHHHHHTTCSCHHHHHHHHHHTTC
T ss_pred EecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC-c---chHHHHHHH---HHHHHHHHHHhCCCCHHHHHHHHHhcCC
Confidence 6666 78999999999999999999998743 2 445555444 4699999999999999999999986544
No 96
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.76 E-value=5.3e-18 Score=151.52 Aligned_cols=192 Identities=16% Similarity=0.079 Sum_probs=134.5
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC-----------CccCCCHHHHhhcCCeEEEEeCCh
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG-----------AKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g-----------~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
|.+||+|||+|+||..++..|...|++|.+|+|++++.+.+.+.| +..+++.++ ++++|+|++++| +
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~ 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-V 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-G
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-H
Confidence 479999999999999999999999999999999988888777654 355667888 889999999998 4
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCC-ChhHHHHHHHHHHHc-C--CcEEeCccCCCCccccCCce-EEEecCCHHH
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKAT-G--ASFLEAPVSGSKKPAEDGQL-IFLAAGDKSL 213 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~-~~~~~~~l~~~l~~~-~--~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 213 (290)
..++.++ +++.+ +++++|+++.+ .+...+.+.+.+.+. + ..+...|.+..+.. .+.+ .+..++.+
T Consensus 91 ~~~~~v~---~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~--~g~~~~~~~g~~~-- 160 (335)
T 1z82_A 91 QYIREHL---LRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVA--KKLPTAVTLAGEN-- 160 (335)
T ss_dssp GGHHHHH---TTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHH--TTCCEEEEEEETT--
T ss_pred HHHHHHH---HHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHh--CCCceEEEEEehh--
Confidence 8888887 22333 78899999855 433333444444432 1 22344554432211 2322 22333333
Q ss_pred HHHHHHHHHHhCCcEEEeCCcchHHHHHHH-----------------HHHHHHHH-HHHHHHHHHHHHCCCCHHHHHH
Q 022909 214 YNTVAPLLDIMGKSRFYLGDVGNGAAMKLV-----------------VNMIMGRS-CTFSYSFLTLEFVDFLINTVTM 273 (290)
Q Consensus 214 ~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~-----------------~n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~ 273 (290)
.+.++++|+..|.+++..++.-...+.|++ .|...+++ .++.|+..++++.|++++++.+
T Consensus 161 ~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 161 SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 788999999999988877775433343322 34444556 8999999999999999988754
No 97
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.75 E-value=1.3e-18 Score=157.28 Aligned_cols=196 Identities=11% Similarity=0.025 Sum_probs=138.6
Q ss_pred eEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC--------------CccCCCHHHHhhcCCeEEEEeCCh
Q 022909 73 RIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG--------------AKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 73 ~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
+|+|||+|.||..+|..|...|++|.+|+|++++.+.+.+.+ +...++++++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999999988777766532 33446788889999999999985
Q ss_pred hHHHHHhccccc----ccccCCC-CCEEEEecCC-ChhHHHHHHHHHHHc-C---CcEEeCccCCCCccccCCceEEEec
Q 022909 139 ESAMDVACGKHG----AASGMGP-GKGYVDVSTV-DGDTSKLINGHIKAT-G---ASFLEAPVSGSKKPAEDGQLIFLAA 208 (290)
Q Consensus 139 ~~~~~~~~~~~~----~~~~~~~-~~~lin~s~~-~~~~~~~l~~~l~~~-~---~~~~~~p~~~~~~~~~~~~~~~~~~ 208 (290)
..++.++ ++ +.+.+++ ++++|+++.+ .+...+.+.+.+.+. + ..++..|.+..+........+++.+
T Consensus 96 ~~~~~v~---~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~g~~~~~~~~~ 172 (366)
T 1evy_A 96 QFLRGFF---EKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIAS 172 (366)
T ss_dssp HHHHHHH---HHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCEEEEEEC
T ss_pred HHHHHHH---HHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHhCCceEEEEec
Confidence 6777776 33 5556777 8999999854 332223334444332 2 2233445443221122223345556
Q ss_pred CCHHHHHHHHHHHHHh--CCcEEEeCCcchHHHHHHH-----------------HHHHHHHH-HHHHHHHHHHHHCCCCH
Q 022909 209 GDKSLYNTVAPLLDIM--GKSRFYLGDVGNGAAMKLV-----------------VNMIMGRS-CTFSYSFLTLEFVDFLI 268 (290)
Q Consensus 209 ~~~~~~~~v~~ll~~~--G~~~~~~~~~g~a~~~k~~-----------------~n~~~~~~-~~~~ea~~l~~~~G~~~ 268 (290)
++++..+.++++|+.. |..++..++.....+.|.+ .|.....+ .++.|+..++++.|+++
T Consensus 173 ~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~ 252 (366)
T 1evy_A 173 ADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDG 252 (366)
T ss_dssp SSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6788889999999999 8888777775444444443 44455566 89999999999999998
Q ss_pred HHHH
Q 022909 269 NTVT 272 (290)
Q Consensus 269 ~~~~ 272 (290)
+++.
T Consensus 253 ~~~~ 256 (366)
T 1evy_A 253 SAVF 256 (366)
T ss_dssp TTTT
T ss_pred cccc
Confidence 7654
No 98
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.75 E-value=6.4e-18 Score=153.28 Aligned_cols=198 Identities=13% Similarity=0.045 Sum_probs=141.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC-------CeEEEEeCCcc-----chhhHHhC--------------CCccCCCHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG-------CDVTVWNRTKS-----KCDPLISL--------------GAKYQPSPDEV 124 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~~~~~ 124 (290)
.++|+|||+|.||..+|..|...| ++|.+|+|+++ +.+.+.+. ++..+++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 468999999999999999999988 99999999987 66665542 23445678888
Q ss_pred hhcCCeEEEEeCChhHHHHHhcccccccc----cCCCCCEEEEecCCChh---HHHHHHHHHHHc---CCcEEeCccCCC
Q 022909 125 AASCDVTFAMLADPESAMDVACGKHGAAS----GMGPGKGYVDVSTVDGD---TSKLINGHIKAT---GASFLEAPVSGS 194 (290)
Q Consensus 125 ~~~aDivv~~~p~~~~~~~~~~~~~~~~~----~~~~~~~lin~s~~~~~---~~~~l~~~l~~~---~~~~~~~p~~~~ 194 (290)
++++|+|++++|. ..++.++ +++.+ .+++++++|+++.+-.. ..+.+.+.+.+. ...++..|.+..
T Consensus 101 ~~~aDvVilav~~-~~~~~vl---~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~ 176 (375)
T 1yj8_A 101 INDADLLIFIVPC-QYLESVL---ASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIAM 176 (375)
T ss_dssp HTTCSEEEECCCH-HHHHHHH---HHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCHH
T ss_pred HcCCCEEEEcCCH-HHHHHHH---HHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchHH
Confidence 8999999999984 7788887 34556 78889999999865332 112233333321 122334454332
Q ss_pred CccccCCceEEEecCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHH-----------------HHHHHHHH-HHHHH
Q 022909 195 KKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV-----------------VNMIMGRS-CTFSY 256 (290)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~-----------------~n~~~~~~-~~~~e 256 (290)
+........+++.+++++..+.++++|+..|.+++..++.....+.|.+ .|...+++ .++.|
T Consensus 177 ~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E 256 (375)
T 1yj8_A 177 DVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINE 256 (375)
T ss_dssp HHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHH
Confidence 2222233345556677888899999999999988888886555554443 45556666 99999
Q ss_pred HHHHHHHC--CCCHHHHH
Q 022909 257 SFLTLEFV--DFLINTVT 272 (290)
Q Consensus 257 a~~l~~~~--G~~~~~~~ 272 (290)
+..++++. |++++++.
T Consensus 257 ~~~la~a~G~G~~~~~~~ 274 (375)
T 1yj8_A 257 MILFGKVFFQKFNENILL 274 (375)
T ss_dssp HHHHHHHHSSCCCGGGGG
T ss_pred HHHHHHHhccCCCcchhh
Confidence 99999999 69987764
No 99
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.75 E-value=8.3e-18 Score=149.95 Aligned_cols=196 Identities=10% Similarity=0.042 Sum_probs=140.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeC--CccchhhHHhCCC-----------ccCC--CHHHHhhcCCeEEEEeC
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNR--TKSKCDPLISLGA-----------KYQP--SPDEVAASCDVTFAMLA 136 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~--~~~~~~~~~~~g~-----------~~~~--~~~~~~~~aDivv~~~p 136 (290)
|+|+|||+|.||..+|..|...|++|++|+| ++++.+.+.+.+. ...+ ++.++++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 5799999999999999999999999999999 8887777766553 3344 67778899999999998
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecCCC----hhHHHHHHHHHHHc-CC----cEEeCccCCCCccccCCceEEEe
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVSTVD----GDTSKLINGHIKAT-GA----SFLEAPVSGSKKPAEDGQLIFLA 207 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~----~~~~~~l~~~l~~~-~~----~~~~~p~~~~~~~~~~~~~~~~~ 207 (290)
.+ .+..++ +++.+ +++++++|+++.+- +...+.+.+.+.+. +. .+...|.............+++.
T Consensus 81 ~~-~~~~v~---~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 155 (335)
T 1txg_A 81 TD-GVLPVM---SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVFS 155 (335)
T ss_dssp GG-GHHHHH---HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEEE
T ss_pred hH-HHHHHH---HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHHHccCCcEEEEE
Confidence 64 677777 44567 88899999987553 23344566666542 22 12223332111111111234455
Q ss_pred cCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHH-----------------HHH-----HHHHHHHH-HHHHHHHHHHHHC
Q 022909 208 AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAM-----------------KLV-----VNMIMGRS-CTFSYSFLTLEFV 264 (290)
Q Consensus 208 ~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~-----------------k~~-----~n~~~~~~-~~~~ea~~l~~~~ 264 (290)
+.+++..+.++++|+..|..++..++.....+. |+. .|.....+ .++.|+..++++.
T Consensus 156 ~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~ 235 (335)
T 1txg_A 156 SPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEIL 235 (335)
T ss_dssp CSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 567888899999999999888888887665554 444 56555666 8999999999999
Q ss_pred CCCHHHHH
Q 022909 265 DFLINTVT 272 (290)
Q Consensus 265 G~~~~~~~ 272 (290)
|++++++.
T Consensus 236 G~~~~~~~ 243 (335)
T 1txg_A 236 GGDRETAF 243 (335)
T ss_dssp TSCGGGGG
T ss_pred CCCcchhh
Confidence 99987664
No 100
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.74 E-value=1.8e-18 Score=151.06 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=137.9
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC---C-----ccCCCHHHHhhcCCeEEEEeCChhHHHH
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG---A-----KYQPSPDEVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g---~-----~~~~~~~~~~~~aDivv~~~p~~~~~~~ 143 (290)
|||+|||+|.||..+|..|...|++|++|+|++++.+.+...+ . ...++ .+.++++|+|++++|.+ .++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~-~~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAW-QVSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGG-GHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHH-hHHH
Confidence 5799999999999999999999999999999987665543322 1 01233 46778999999999875 5777
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHH--cCCcE----EeCccCCCCccccCCceEEEe-cCCHHHHHH
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA--TGASF----LEAPVSGSKKPAEDGQLIFLA-AGDKSLYNT 216 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~--~~~~~----~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (290)
++ +++.+.+++++++|+++.+. ...+.+.+.+.+ .+..+ ...| . ......+.+.+.. +++++..+.
T Consensus 79 v~---~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~~~~~g~~~~~~~~~~p-~--~~~~~~g~~~i~~~~~~~~~~~~ 151 (291)
T 1ks9_A 79 AV---KSLASTLPVTTPILLIHNGM-GTIEELQNIQQPLLMGTTTHAARRDGN-V--IIHVANGITHIGPARQQDGDYSY 151 (291)
T ss_dssp HH---HHHHTTSCTTSCEEEECSSS-CTTGGGTTCCSCEEEEEECCEEEEETT-E--EEEEECCCEEEEESSGGGTTCTH
T ss_pred HH---HHHHhhCCCCCEEEEecCCC-CcHHHHHHhcCCeEEEEEeEccEEcCC-E--EEEecccceEEccCCCCcchHHH
Confidence 77 45667788899999986653 222334443332 11111 2233 1 2223345555443 345567788
Q ss_pred HHHHHHHhCCcEEEeCCcchHHHHHHHHHHHH------------------HHH-HHHHHHHHHHHHCCCCH--HHH
Q 022909 217 VAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM------------------GRS-CTFSYSFLTLEFVDFLI--NTV 271 (290)
Q Consensus 217 v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~------------------~~~-~~~~ea~~l~~~~G~~~--~~~ 271 (290)
++++|+..|..+++.++.+.+.+.|++.|... ..+ .++.|+..++++.|++. +.+
T Consensus 152 ~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~ 227 (291)
T 1ks9_A 152 LADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDL 227 (291)
T ss_dssp HHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 99999999999999999999999999999776 566 89999999999999986 555
No 101
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.74 E-value=4.4e-18 Score=149.88 Aligned_cols=205 Identities=10% Similarity=0.024 Sum_probs=145.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-----------hCC--------------CccCCCHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-----------SLG--------------AKYQPSPDEVA 125 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-----------~~g--------------~~~~~~~~~~~ 125 (290)
..+|+|||+|.||..+|..++..|++|.+||++++..+... +.| +..++++++++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 47899999999999999999999999999999987543321 111 23457888999
Q ss_pred hcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEE
Q 022909 126 ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIF 205 (290)
Q Consensus 126 ~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 205 (290)
+++|+|+.++|.+.+.+.-++ +++-+..+++++|-..+++-+. .++.+.+.+. -+++....|.++.. -+++-
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf--~~l~~~~~~~aIlaSNTSsl~i--s~ia~~~~~p-~r~ig~HffNP~~~---m~LVE 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLP--SKLFTGLAHV-KQCIVAHPVNPPYY---IPLVE 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCH--HHHHTTCTTG-GGEEEEEECSSTTT---CCEEE
T ss_pred ccCcEEeeccccHHHHHHHHH--HHHHHHhhhcceeehhhhhccc--hhhhhhccCC-CcEEEecCCCCccc---cchHH
Confidence 999999999999999887774 4556678889887544444333 3555555433 23444223333222 23344
Q ss_pred Eec---CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhhcCCCC
Q 022909 206 LAA---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQSFSFGN 282 (290)
Q Consensus 206 ~~~---~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~~~~gs 282 (290)
++. .+++.++.+.++++.+|+.++.+...-.+....-+. ...+.|++.+.++.+.++++++.++...++-.
T Consensus 158 iv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~------~~~~~EA~~lv~eGvas~edID~~~~~g~g~~ 231 (319)
T 3ado_A 158 LVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQ------YAIISEAWRLVEEGIVSPSDLDLVMSDGLGMR 231 (319)
T ss_dssp EEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHH------HHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHH
T ss_pred hcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHH------HHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCC
Confidence 443 367999999999999999988664322333322221 15669999999999999999999999988877
Q ss_pred ccccCCC
Q 022909 283 LQYDGNF 289 (290)
Q Consensus 283 ~~~~~~~ 289 (290)
|.++|+|
T Consensus 232 ~a~mGPf 238 (319)
T 3ado_A 232 YAFIGPL 238 (319)
T ss_dssp HTTSCHH
T ss_pred CCCcchh
Confidence 8778776
No 102
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.74 E-value=1.8e-17 Score=149.01 Aligned_cols=197 Identities=12% Similarity=0.052 Sum_probs=139.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC-------CeEEEEeCCcc-----chhhHHhC--------------CCccCCCHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG-------CDVTVWNRTKS-----KCDPLISL--------------GAKYQPSPDEV 124 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~~~~~ 124 (290)
.|+|+|||+|.||..+|..|...| ++|.+|+|+++ +.+.+.+. ++..+++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 479999999999999999999988 89999999987 66555431 12334678888
Q ss_pred hhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChh---HHHHHHHHHHHc-C--CcEEeCccCCCCccc
Q 022909 125 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD---TSKLINGHIKAT-G--ASFLEAPVSGSKKPA 198 (290)
Q Consensus 125 ~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~---~~~~l~~~l~~~-~--~~~~~~p~~~~~~~~ 198 (290)
++++|+|++++|. ..++.++ +++.+.+++++++|+++.+-.. ..+.+.+.+.+. + ..+...|.+..+...
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~---~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~~v~~ 163 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC---DQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANIASEVAD 163 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH---HHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCCHHHHHT
T ss_pred HcCCCEEEEeCCH-HHHHHHH---HHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCcHHHHHh
Confidence 8999999999985 6777777 4566778899999999875431 111222222221 2 223344543322111
Q ss_pred cCCceEEEecCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHH-----------------HHHHHHHH-HHHHHHHHH
Q 022909 199 EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV-----------------VNMIMGRS-CTFSYSFLT 260 (290)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~-----------------~n~~~~~~-~~~~ea~~l 260 (290)
......++.+.+++..+.++++|+..|.+++..++.....+.|.+ .|....++ .++.|+..+
T Consensus 164 g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~l 243 (354)
T 1x0v_A 164 EKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAF 243 (354)
T ss_dssp TCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHH
Confidence 222334455667888899999999999988888886555665554 45555666 999999999
Q ss_pred HHHCCC---CHHHH
Q 022909 261 LEFVDF---LINTV 271 (290)
Q Consensus 261 ~~~~G~---~~~~~ 271 (290)
+++.|+ +++++
T Consensus 244 a~a~G~~~~~~~~~ 257 (354)
T 1x0v_A 244 AKLFCSGPVSSATF 257 (354)
T ss_dssp HHHHSSSCCCGGGG
T ss_pred HHHhcCCCCCcccc
Confidence 999999 87765
No 103
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.73 E-value=3.1e-17 Score=137.95 Aligned_cols=162 Identities=17% Similarity=0.276 Sum_probs=117.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEE-EeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTV-WNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~-~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+|+|+|||+|+||..+++.|...|++|.+ ++|++++.+.+.+ .+.....+..+.++++|+|++++|. .....++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~--- 98 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIV--- 98 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHH---
Confidence 47999999999999999999999999998 9999998887654 4665555566678999999999974 6677777
Q ss_pred ccccccCCCCCEEEEecCCCh------------hHHHHHHHHHHHcCCcEEe-Cc-----cCC-CCccccCCceEEEecC
Q 022909 149 HGAASGMGPGKGYVDVSTVDG------------DTSKLINGHIKATGASFLE-AP-----VSG-SKKPAEDGQLIFLAAG 209 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~------------~~~~~l~~~l~~~~~~~~~-~p-----~~~-~~~~~~~~~~~~~~~~ 209 (290)
+++.+ + +++++|+++.+-. ...+.+.+.+. +.+++. .| ++. ++.....+..+++.+.
T Consensus 99 ~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~ 174 (220)
T 4huj_A 99 TQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGN 174 (220)
T ss_dssp TTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEES
T ss_pred HHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCC
Confidence 33444 3 5889999976542 14556666664 223332 22 222 2211122234556677
Q ss_pred CHHHHHHHHHHHHHhCCcEEEeCCcchHHHH
Q 022909 210 DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAM 240 (290)
Q Consensus 210 ~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~ 240 (290)
++++.+.++++++.+|++++++++.+.+.++
T Consensus 175 ~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~~ 205 (220)
T 4huj_A 175 HSDANRQVAELISSLGFAPVDLGTLAASGPI 205 (220)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEeeCChhhcchh
Confidence 8899999999999999999999998877664
No 104
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.72 E-value=9.2e-18 Score=148.46 Aligned_cols=200 Identities=14% Similarity=0.133 Sum_probs=141.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-----C-CeEEEEeCCccchhhHHh-CCCccCC-------------CHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-----G-CDVTVWNRTKSKCDPLIS-LGAKYQP-------------SPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-----g-~~V~~~d~~~~~~~~~~~-~g~~~~~-------------~~~~~~~~aDi 130 (290)
.|+|+|||+|.||..+|..|... | ++|++|+| +++.+.+.+ .|+.... +..+.++++|+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDY 86 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCE
Confidence 46999999999999999999998 9 99999999 777777776 6654332 33355788999
Q ss_pred EEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHc----CCcEEeCccCCCCc--cccCCceE
Q 022909 131 TFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT----GASFLEAPVSGSKK--PAEDGQLI 204 (290)
Q Consensus 131 vv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~----~~~~~~~p~~~~~~--~~~~~~~~ 204 (290)
|++++|.. .+..++ +++.+.+++++++|+++.+. ...+.+.+.+.+. +..+.++++.++-. ....+...
T Consensus 87 vil~vk~~-~~~~v~---~~i~~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~ 161 (317)
T 2qyt_A 87 ILFCTKDY-DMERGV---AEIRPMIGQNTKILPLLNGA-DIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELF 161 (317)
T ss_dssp EEECCSSS-CHHHHH---HHHGGGEEEEEEEEECSCSS-SHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEecCcc-cHHHHH---HHHHhhcCCCCEEEEccCCC-CcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceE
Confidence 99999874 457766 34556677888999987653 3334555555432 22233444432111 11223333
Q ss_pred EEec----CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHH-------------------HHH-HHHHHHHHH
Q 022909 205 FLAA----GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM-------------------GRS-CTFSYSFLT 260 (290)
Q Consensus 205 ~~~~----~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~-------------------~~~-~~~~ea~~l 260 (290)
++.+ ++.+.. .+.++|+..|..+++.++...+.+.|++.|... .++ .++.|+..+
T Consensus 162 ~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v 240 (317)
T 2qyt_A 162 YFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAEL 240 (317)
T ss_dssp EEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2321 235666 899999999998888899999999999999753 345 789999999
Q ss_pred HHHCCCCHH--HHHHHHhh
Q 022909 261 LEFVDFLIN--TVTMFLQS 277 (290)
Q Consensus 261 ~~~~G~~~~--~~~~~i~~ 277 (290)
+++.|++.+ .+.+.+..
T Consensus 241 ~~a~G~~~~~~~~~~~~~~ 259 (317)
T 2qyt_A 241 FRAKYGQVPDDVVQQLLDK 259 (317)
T ss_dssp HHHHTSCCCSSHHHHHHHH
T ss_pred HHHcCCCCChHHHHHHHHH
Confidence 999999864 56666544
No 105
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.71 E-value=4e-17 Score=136.21 Aligned_cols=172 Identities=17% Similarity=0.252 Sum_probs=127.9
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-C-------CccCCCHHHHhhcCCeEEEEeCChhHHH
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-G-------AKYQPSPDEVAASCDVTFAMLADPESAM 142 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g-------~~~~~~~~~~~~~aDivv~~~p~~~~~~ 142 (290)
|+|+||| +|.||+.+++.|...|++|.+++|++++.+.+.+. + +. ..+++++++++|+|++++|. ..++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHH
Confidence 5799999 99999999999999999999999998776655442 2 33 35778889999999999984 5566
Q ss_pred HHhcccccccccCCCCCEEEEecCCChh------------HHHHHHHHHHHcCCcEEeC--ccCCCCccc--cCCceEEE
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGD------------TSKLINGHIKATGASFLEA--PVSGSKKPA--EDGQLIFL 206 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~------------~~~~l~~~l~~~~~~~~~~--p~~~~~~~~--~~~~~~~~ 206 (290)
.++ +++.+.+ +++++|+++++-.. ..+.+.+.+. +.+++.. |+....... ..+.+.++
T Consensus 79 ~~~---~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (212)
T 1jay_A 79 DTA---RDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVP 152 (212)
T ss_dssp HHH---HHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEE
T ss_pred HHH---HHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEE
Confidence 766 2344445 48899999875431 2566666664 3567764 443322221 34455666
Q ss_pred ecCC-HHHHHHHHHHHHHh-CCcEEEeCCcchHHHHHHHHHHHHHHH
Q 022909 207 AAGD-KSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVVNMIMGRS 251 (290)
Q Consensus 207 ~~~~-~~~~~~v~~ll~~~-G~~~~~~~~~g~a~~~k~~~n~~~~~~ 251 (290)
++++ ++.++.++++++.+ |..++++++.+.+.++|.+.+.+....
T Consensus 153 ~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~ 199 (212)
T 1jay_A 153 VCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIM 199 (212)
T ss_dssp EEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHHHHHH
Confidence 6664 88899999999999 999999999999999999988765443
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.71 E-value=4e-17 Score=136.20 Aligned_cols=152 Identities=18% Similarity=0.186 Sum_probs=113.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.++|+|||+|.||..+++.|...|++|.+|||+++ .++++|+|++++| +..++.++ ++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~---~~ 76 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALA---KQ 76 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHH---HH
Confidence 68999999999999999999999999999999864 4578999999998 67788887 34
Q ss_pred ccccCCCCCEEEEecCCCh-hH------------HHHHHHHHHHcCCcEEe------CccCCCCccccCCceEE-EecCC
Q 022909 151 AASGMGPGKGYVDVSTVDG-DT------------SKLINGHIKATGASFLE------APVSGSKKPAEDGQLIF-LAAGD 210 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~-~~------------~~~l~~~l~~~~~~~~~------~p~~~~~~~~~~~~~~~-~~~~~ 210 (290)
+.+.++ ++++|+++++-. .+ .+.+.+.+. +.+++. .|.+..+......+..+ +.+.+
T Consensus 77 l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~ 153 (209)
T 2raf_A 77 YATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGND 153 (209)
T ss_dssp THHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEECEEEEEESC
T ss_pred HHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCceeEEcCCC
Confidence 555677 899999988554 11 345555443 355665 34433322222123333 44455
Q ss_pred HHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHH
Q 022909 211 KSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI 247 (290)
Q Consensus 211 ~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~ 247 (290)
++..+.++++++.+|.+++++++.+.+.++|.+.+++
T Consensus 154 ~~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 154 DSAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp HHHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHH
Confidence 6889999999999999999999999999999887765
No 107
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.54 E-value=8.6e-19 Score=145.39 Aligned_cols=162 Identities=17% Similarity=0.241 Sum_probs=116.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+|+|+|||+|+||+.+++.|.+.|++|.+|+|+++ .+.+.+.++... +.+++++++|+|++++|. ..++.++ +
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~-~~~~~v~----~ 91 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHR-EHYDFLA----E 91 (201)
Confidence 68999999999999999999999999999999876 444544566555 778889999999999987 4566665 1
Q ss_pred ccccCCCCCEEEEecCCChh------HHHHHHHHHHHcCCcEEe-CccCCCCccccCCc-----eEEEecCCHHHHHHHH
Q 022909 151 AASGMGPGKGYVDVSTVDGD------TSKLINGHIKATGASFLE-APVSGSKKPAEDGQ-----LIFLAAGDKSLYNTVA 218 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~------~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~ 218 (290)
+..+++++++||++++.+. ..+.+.+.+... +++. .|..+... ...+. ..++++++++.++.++
T Consensus 92 -l~~~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~--~vvra~~n~~a~~-~~~g~l~g~~~~~~~g~~~~~~~~v~ 167 (201)
T 2yjz_A 92 -LADSLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGA--HVVKAFNTISAWA-LQSGTLDASRQVFVCGNDSKAKDRVM 167 (201)
Confidence 2335678999999998763 223343333321 2222 22222111 11122 1456677788899999
Q ss_pred HHHHHhCCcEEEeCCcchHHHHHHH
Q 022909 219 PLLDIMGKSRFYLGDVGNGAAMKLV 243 (290)
Q Consensus 219 ~ll~~~G~~~~~~~~~g~a~~~k~~ 243 (290)
++|+.+|.+++++++.+.+.++|.+
T Consensus 168 ~ll~~~G~~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 168 DIARTLGLTPLDQGSLVAAKEIENY 192 (201)
Confidence 9999999999999999999988743
No 108
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.70 E-value=7e-17 Score=144.37 Aligned_cols=202 Identities=16% Similarity=0.119 Sum_probs=133.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccc-hhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK-CDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~-~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+++|+|||+|.||.++|+.|+..|++|.++++++++ .+...+.|+... +++++++++|+|++++|.. ....++ .+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~-~~~~v~--~~ 91 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDE-FQGRLY--KE 91 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHH-HHHHHH--HH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcH-HHHHHH--HH
Confidence 689999999999999999999999999999998765 444555777665 8889999999999999864 457777 22
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHH-HcCCcEEe-CccCCCCcc------ccCCceEEEe---cCCHHHHHHHH
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIK-ATGASFLE-APVSGSKKP------AEDGQLIFLA---AGDKSLYNTVA 218 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~-~~~~~~~~-~p~~~~~~~------~~~~~~~~~~---~~~~~~~~~v~ 218 (290)
++.+.++++++++++++ ... .+ +.+. ..++.++. +| .++... .+.+...+++ ..++++.+.+.
T Consensus 92 ~i~~~l~~~~ivi~~~g---v~~-~~-~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~ 165 (338)
T 1np3_A 92 EIEPNLKKGATLAFAHG---FSI-HY-NQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVAL 165 (338)
T ss_dssp HTGGGCCTTCEEEESCC---HHH-HT-TSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHH
T ss_pred HHHhhCCCCCEEEEcCC---chh-HH-HhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHH
Confidence 56778999999998743 222 22 2222 22445554 56 222211 1224444433 34567889999
Q ss_pred HHHHHhCC-c--EEEeCCcchHHHHHHHHH-HHHHHH-HHHHHHHHHHHHCCCCHHHH-------HHHHhhc-CCCC
Q 022909 219 PLLDIMGK-S--RFYLGDVGNGAAMKLVVN-MIMGRS-CTFSYSFLTLEFVDFLINTV-------TMFLQSF-SFGN 282 (290)
Q Consensus 219 ~ll~~~G~-~--~~~~~~~g~a~~~k~~~n-~~~~~~-~~~~ea~~l~~~~G~~~~~~-------~~~i~~~-~~gs 282 (290)
++++.+|. + ++.+....+.....+.++ .+.+.. ..+..++..+.+.|++++.+ .+++.++ ..|+
T Consensus 166 ~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~~~~~~~~~~gg 242 (338)
T 1np3_A 166 SYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMYEGG 242 (338)
T ss_dssp HHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHHHHHHHHHHhcC
Confidence 99999998 4 666654334433334433 122222 33344444557899999887 5677666 3444
No 109
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.69 E-value=2.4e-17 Score=143.38 Aligned_cols=183 Identities=14% Similarity=0.130 Sum_probs=116.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeE-EEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDV-TVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V-~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+|+|+|||+|+||..+++.|... ++| .+|||++++.+.+.+ .+. .+.+++++++++|+|++++|... ...++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~~v~--- 75 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IKTVA--- 75 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HHHHH---
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HHHHH---
Confidence 47899999999999999999887 888 599999888777654 466 66678888889999999998754 56666
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCcccc-CCceEEEecCCHHHHHHHHHHHHHhCCc
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAE-DGQLIFLAAGDKSLYNTVAPLLDIMGKS 227 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~ll~~~G~~ 227 (290)
+++. ++++++||++.+.+.+. +.+. ..+..+...++.+++.... .....+...++++.++.++++++.+|..
T Consensus 76 ~~l~---~~~~ivi~~s~~~~~~~--l~~~--~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~ 148 (276)
T 2i76_A 76 NHLN---LGDAVLVHCSGFLSSEI--FKKS--GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGK 148 (276)
T ss_dssp TTTC---CSSCCEEECCSSSCGGG--GCSS--SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSC
T ss_pred HHhc---cCCCEEEECCCCCcHHH--HHHh--hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCC
Confidence 2222 68899999986644432 1111 0001111233444332222 2233345566677789999999999988
Q ss_pred EEEeCCcchH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q 022909 228 RFYLGDVGNG---AAMKLVVNMIMGRSCTFSYSFLTLEFVDFLIN 269 (290)
Q Consensus 228 ~~~~~~~g~a---~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~ 269 (290)
++++++.+.. ...++..|+.. ..+.++..++++.|++.+
T Consensus 149 ~~~v~~~~~~~~~~~~~l~~n~~~---~~~~~a~~~~~~~Gl~~~ 190 (276)
T 2i76_A 149 YFVIPSEKKKAYHLAAVIASNFPV---ALAYLSKRIYTLLGLDEP 190 (276)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTHH---HHHHHHHHHHHTTTCSCH
T ss_pred EEEECHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcCCChH
Confidence 8888865433 22344455333 455777788999999988
No 110
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.69 E-value=1.5e-16 Score=154.87 Aligned_cols=188 Identities=13% Similarity=0.113 Sum_probs=131.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhH-----------HhCC-------------CccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL-----------ISLG-------------AKYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~ 126 (290)
.++|+|||+|.||..+|..++..|++|++||+++++.+.. .+.| +..++++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 4789999999999999999999999999999998776542 1223 2344566 6789
Q ss_pred cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEE
Q 022909 127 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFL 206 (290)
Q Consensus 127 ~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 206 (290)
+||+||+++|.+.+.+..++ +++.+.+++++++++.+++.+.. ++.+.+.. .-+++....+.+.. ..+++.+
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~--~la~~~~~-~~~~ig~hf~~P~~---~~~lvev 464 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVL--AEVENHVREDAILASNTSTISIS--LLAKALKR-PENFVGMHFFNPVH---MMPLVEV 464 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHH--HHGGGCSC-GGGEEEEECCSSTT---TCCEEEE
T ss_pred CCCEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEeCCCCCCHH--HHHHHhcC-ccceEEEEccCCcc---cCceEEE
Confidence 99999999998887765542 34667788999987544433332 34444322 12344422232221 2233434
Q ss_pred ecC---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q 022909 207 AAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFL 275 (290)
Q Consensus 207 ~~~---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i 275 (290)
+.+ +++.++.+.++++.+|+.++++++. .+. ++++++. ..++|++.++++ |++++++++++
T Consensus 465 v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~---~~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 465 IRGEKSSDLAVATTVAYAKKMGKNPIVVNDC-PGF---LVNRVLF---PYFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESC-TTT---THHHHHH---HHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCEeEEEcCC-CCh---hhhHHHH---HHHHHHHHHHHC-CCCHHHHHHHH
Confidence 443 7899999999999999999999874 222 2333332 457899999987 99999999999
No 111
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.67 E-value=5.3e-16 Score=129.96 Aligned_cols=165 Identities=18% Similarity=0.255 Sum_probs=118.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|||+|.||+.+++.|...|++|.+++|++++.+.+.+.|+... +++++++++|+|++++|. ...+.++ +
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~---~- 101 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLC---S- 101 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGG---G-
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHH---H-
Confidence 578999999999999999999999999999999887776666666655 788889999999999985 4555554 1
Q ss_pred ccccCCCCCEEEEecCCChhHHH--------HHHHHHHHcCCcEEe--CccCCC---CccccCCceEEEecCCHHHHHHH
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSK--------LINGHIKATGASFLE--APVSGS---KKPAEDGQLIFLAAGDKSLYNTV 217 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~--------~l~~~l~~~~~~~~~--~p~~~~---~~~~~~~~~~~~~~~~~~~~~~v 217 (290)
+...+ +++++|+++++...... .+.+.+. +.+++. .++.+. +........+++.+++++.++.+
T Consensus 102 l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~--~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v 178 (215)
T 2vns_A 102 LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP--TCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAV 178 (215)
T ss_dssp GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT--TSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHH
T ss_pred HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC--CCeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHH
Confidence 22334 78999999998865431 1122222 223332 111110 00111122456778889999999
Q ss_pred HHHHHHhCCcEEEeCCcchHHHHHHHH
Q 022909 218 APLLDIMGKSRFYLGDVGNGAAMKLVV 244 (290)
Q Consensus 218 ~~ll~~~G~~~~~~~~~g~a~~~k~~~ 244 (290)
+++++.+|.+++++++.+.+.+++.+.
T Consensus 179 ~~ll~~~G~~~~~~g~~~~~~~~e~~~ 205 (215)
T 2vns_A 179 SEMALAMGFMPVDMGSLASAWEVEAMP 205 (215)
T ss_dssp HHHHHHTTCEEEECCSGGGHHHHHHSC
T ss_pred HHHHHHcCCceEeecchhhhhHhhhhh
Confidence 999999999999999999999887543
No 112
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.66 E-value=6.2e-16 Score=150.72 Aligned_cols=189 Identities=12% Similarity=0.059 Sum_probs=130.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----------CC-------------CccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----------LG-------------AKYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 126 (290)
.++|+|||+|.||..+|..++..|++|++||++++..+...+ .| +...+++ +.++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 390 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFR 390 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGT
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHC
Confidence 478999999999999999999999999999999876654311 12 2334566 5689
Q ss_pred cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEE
Q 022909 127 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFL 206 (290)
Q Consensus 127 ~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 206 (290)
+||+||+++|.+.+++..++ +++.+.+++++++++.+++.+.+ .+.+.+.. .-+++....+.++. ..+++.+
T Consensus 391 ~aDlVIeaVpe~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~--~la~~~~~-p~~~iG~hf~~P~~---~~~lvev 462 (725)
T 2wtb_A 391 DVDMVIEAVIENISLKQQIF--ADLEKYCPQHCILASNTSTIDLN--KIGERTKS-QDRIVGAHFFSPAH---IMPLLEI 462 (725)
T ss_dssp TCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHTTTCSC-TTTEEEEEECSSTT---TCCEEEE
T ss_pred CCCEEEEcCcCCHHHHHHHH--HHHHhhCCCCcEEEeCCCCCCHH--HHHHHhcC-CCCEEEecCCCCcc---cCceEEE
Confidence 99999999999877765552 34566788999886544433332 34443322 12344422232221 2234444
Q ss_pred ecC---CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHh
Q 022909 207 AAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQ 276 (290)
Q Consensus 207 ~~~---~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~ 276 (290)
+.+ ++++++.+.++++.+|+.++++++. .+. ++++++. ..++|++.++++ |++++++++++.
T Consensus 463 v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~---~~~~Ea~~l~~~-G~~~e~id~~~~ 527 (725)
T 2wtb_A 463 VRTNHTSAQVIVDLLDVGKKIKKTPVVVGNC-TGF---AVNRMFF---PYTQAAMFLVEC-GADPYLIDRAIS 527 (725)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESS-TTT---THHHHHH---HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH---HHHHHHH---HHHHHHHHHHHC-CCCHHHHHHHHH
Confidence 444 7899999999999999999999874 222 2233332 457999999988 999999999993
No 113
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.65 E-value=2.7e-15 Score=139.42 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=128.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----------CC-----------CccCCCHHHHhhcC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----------LG-----------AKYQPSPDEVAASC 128 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----------~g-----------~~~~~~~~~~~~~a 128 (290)
.++|+|||+|.||..+|..++..|++|++||++++..+...+ .| ...++++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 478999999999999999999999999999999876554322 11 1234566 567899
Q ss_pred CeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEec
Q 022909 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAA 208 (290)
Q Consensus 129 Divv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 208 (290)
|+||+++|.+.+.+..++ +++.+.++++++|++. +.++... .+.+.+.. ..+++....+.+.. ..+++.++.
T Consensus 116 DlVIeaVpe~~~~k~~v~--~~l~~~~~~~~ii~sn-Ts~~~~~-~la~~~~~-~~~~ig~hf~~P~~---~~~lvevv~ 187 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCTN-TSALNVD-DIASSTDR-PQLVIGTHFFSPAH---VMRLLEVIP 187 (463)
T ss_dssp SEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEEC-CSSSCHH-HHHTTSSC-GGGEEEEEECSSTT---TCCEEEEEE
T ss_pred CEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEeC-CCCcCHH-HHHHHhcC-CcceEEeecCCCcc---cceeEEEeC
Confidence 999999998765554442 3455678899998864 3333322 55554432 12344422222211 223333433
Q ss_pred ---CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHh
Q 022909 209 ---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQ 276 (290)
Q Consensus 209 ---~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~ 276 (290)
++++.++.+.++++.+|+.++++++. .+. ++++++. ..++|++.+.++ |++++++++++.
T Consensus 188 g~~t~~e~~~~~~~l~~~lGk~~v~v~~~-~gf---i~Nrll~---~~~~ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 188 SRYSSPTTIATVMSLSKKIGKIGVVVGNC-YGF---VGNRMLA---PYYNQGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEBCCS-TTT---THHHHHH---HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH---HHHHHHH---HHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 57899999999999999999999862 222 2222222 235889888877 899999999997
No 114
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.64 E-value=4.2e-18 Score=157.07 Aligned_cols=133 Identities=14% Similarity=0.047 Sum_probs=106.9
Q ss_pred cCCCCccccccccCCCCCCCCCcccccccccccccCCCccccCCCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccc
Q 022909 27 FCPQLPSYFRQKPINSLPTKPLFPLSFKVFSSQATGVSAEADELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK 106 (290)
Q Consensus 27 ~~r~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~ 106 (290)
+.|++....+.+++| |.+... ..+. +++|+|||+|.||+.+|++++.+|++|++||+++.+
T Consensus 232 l~r~~~~~~~~l~~g-w~r~~~-----~~l~-------------GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 232 KYDNVYGCRHSLPDG-LMRATD-----FLIS-------------GKIVVICGYGDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp TTHHHHHHHHHHHHH-HHHHHC-----CCCT-------------TSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred HHhchHhHHHHHhhh-hhhccc-----cccC-------------CCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 358887777777777 853111 2333 899999999999999999999999999999999876
Q ss_pred hhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCCh-hHHHHHHH--HHHHcC
Q 022909 107 CDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLING--HIKATG 183 (290)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~-~~~~~l~~--~l~~~~ 183 (290)
.......|+.. .+++++++++|+|++++ .+++++ +++.++.||+|+++||++|+.+ +++++|.+ +++++.
T Consensus 293 ~~~a~~~g~~~-~~l~ell~~aDiVi~~~----~t~~lI--~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~ 365 (479)
T 1v8b_A 293 AIQAVMEGFNV-VTLDEIVDKGDFFITCT----GNVDVI--KLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIEN 365 (479)
T ss_dssp HHHHHTTTCEE-CCHHHHTTTCSEEEECC----SSSSSB--CHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEE
T ss_pred HHHHHHcCCEe-cCHHHHHhcCCEEEECC----Chhhhc--CHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeee
Confidence 54444556654 48999999999999995 456777 5677899999999999999999 79999999 887664
Q ss_pred Cc
Q 022909 184 AS 185 (290)
Q Consensus 184 ~~ 185 (290)
+.
T Consensus 366 I~ 367 (479)
T 1v8b_A 366 VK 367 (479)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 115
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.61 E-value=4.6e-18 Score=157.41 Aligned_cols=107 Identities=15% Similarity=0.053 Sum_probs=90.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|||+|.||+.+|++++.+|++|++||+++.+.......|... .+++++++++|+|++++ .+++++ +++
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~----~t~~lI--~~~ 349 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTAT----GNYHVI--NHD 349 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECS----SSSCSB--CHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECC----Cccccc--CHH
Confidence 89999999999999999999999999999999987543334456655 48999999999999997 356777 667
Q ss_pred ccccCCCCCEEEEecCCCh-hHHHHHHHHHHHcCCc
Q 022909 151 AASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGAS 185 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~-~~~~~l~~~l~~~~~~ 185 (290)
.++.||++++|||++|+.+ +++++| ++|+++.+.
T Consensus 350 ~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~ 384 (494)
T 3d64_A 350 HMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK 384 (494)
T ss_dssp HHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE
T ss_pred HHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc
Confidence 7899999999999999999 499999 888766543
No 116
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.60 E-value=1.1e-14 Score=122.25 Aligned_cols=152 Identities=15% Similarity=0.160 Sum_probs=112.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
.|||+|||+|.||.++++.|+..|++|.+|++. ++ ++++| ++++|.. .+..++ ++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl---~~ 60 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV---EK 60 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH---HH
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH---HH
Confidence 589999999999999999999999999999982 12 57799 8889885 777777 45
Q ss_pred ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCccccCCceEEEecCCHHHHHHHHHHHHHhCCcEE
Q 022909 151 AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 229 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 229 (290)
+.+.++++++++++|..... ++.+.+...+..|+. ||+++. ..++..+++++++.++++++.+|.+++
T Consensus 61 l~~~l~~g~ivvd~sgs~~~---~vl~~~~~~g~~fvg~HPm~g~--------~~~i~a~d~~a~~~l~~L~~~lG~~vv 129 (232)
T 3dfu_A 61 LSAFARRGQMFLHTSLTHGI---TVMDPLETSGGIVMSAHPIGQD--------RWVASALDELGETIVGLLVGELGGSIV 129 (232)
T ss_dssp HHTTCCTTCEEEECCSSCCG---GGGHHHHHTTCEEEEEEEEETT--------EEEEEESSHHHHHHHHHHHHHTTCEEC
T ss_pred HHHhcCCCCEEEEECCcCHH---HHHHHHHhCCCcEEEeeeCCCC--------ceeeeCCCHHHHHHHHHHHHHhCCEEE
Confidence 66778999999998644332 233334456788886 898754 244555688889999999999999999
Q ss_pred EeCCcchHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 022909 230 YLGDVGNGAAMKLV--VNMIMGRSCTFSYSFLTL 261 (290)
Q Consensus 230 ~~~~~g~a~~~k~~--~n~~~~~~~~~~ea~~l~ 261 (290)
.+++..+..+...+ .|.+. ....++..+.
T Consensus 130 ~~~~~~hd~~~AAvsh~nhLv---~L~~~A~~ll 160 (232)
T 3dfu_A 130 EIADDKRAQLAAALTYAGFLS---TLQRDASYFL 160 (232)
T ss_dssp CCCGGGHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred EeCHHHHhHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99887666663333 33332 4445555544
No 117
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.58 E-value=1.3e-15 Score=133.57 Aligned_cols=112 Identities=18% Similarity=0.222 Sum_probs=87.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC--CCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ--PSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~--~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+++|+|||+|.||+.+++.++.+|++|++|||++++.+.+.+.|.... .+++++++++|+|++|+|. +++ +
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i--~ 227 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----LVV--T 227 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----CCB--C
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----HHh--C
Confidence 799999999999999999999999999999999876655555665532 4788899999999999986 344 3
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccC
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 192 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~ 192 (290)
++.++.|++++++||+++++... .+ +..+..|+.++..|.+
T Consensus 228 ~~~l~~mk~~~~lin~ar~~~~~--~~-~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 228 ANVLAEMPSHTFVIDLASKPGGT--DF-RYAEKRGIKALLVPGL 268 (293)
T ss_dssp HHHHHHSCTTCEEEECSSTTCSB--CH-HHHHHHTCEEEECCCH
T ss_pred HHHHHhcCCCCEEEEecCCCCCC--CH-HHHHHCCCEEEECCCC
Confidence 45577899999999999865433 12 4445567777655543
No 118
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.57 E-value=1.3e-14 Score=132.62 Aligned_cols=203 Identities=14% Similarity=0.036 Sum_probs=129.7
Q ss_pred C-CeEEEEcccHhHHHHHHHHHHC------CCeEEEEeCCcc-chhhHHhCCCcc----CCCHHHHhhcCCeEEEEeCCh
Q 022909 71 P-GRIGFLGMGIMGTPMAQNLLKA------GCDVTVWNRTKS-KCDPLISLGAKY----QPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~-~~IgiiG~G~iG~~la~~l~~~------g~~V~~~d~~~~-~~~~~~~~g~~~----~~~~~~~~~~aDivv~~~p~~ 138 (290)
+ +||||||+|.||.++|+.|+.. |++|++.+++.+ ..+...+.|+.. ..++.++++++|+|++++|..
T Consensus 53 GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~ 132 (525)
T 3fr7_A 53 GIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDA 132 (525)
T ss_dssp TCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHH
T ss_pred CCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChH
Confidence 7 9999999999999999999998 999987776543 344455677765 258899999999999999875
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHH--HHHHcCCcEEe-CccCCCCc-------c---ccCCce-E
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLING--HIKATGASFLE-APVSGSKK-------P---AEDGQL-I 204 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~--~l~~~~~~~~~-~p~~~~~~-------~---~~~~~~-~ 204 (290)
.. ..++ +++.+.|++|++|+.. .| .+...+.+ .....++.++. +|...+.. . .+.+.. .
T Consensus 133 ~~-~eVl---~eI~p~LK~GaILs~A-aG--f~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~l 205 (525)
T 3fr7_A 133 AQ-ADNY---EKIFSHMKPNSILGLS-HG--FLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 205 (525)
T ss_dssp HH-HHHH---HHHHHHSCTTCEEEES-SS--HHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEE
T ss_pred HH-HHHH---HHHHHhcCCCCeEEEe-CC--CCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEE
Confidence 54 4566 3578899999986443 33 22222222 01113455555 67655443 1 013444 3
Q ss_pred EEecC--CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHH--HHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHhhcC
Q 022909 205 FLAAG--DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVV--NMIMGRSCTFSYSF-LTLEFVDFLINTVTMFLQSFS 279 (290)
Q Consensus 205 ~~~~~--~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~--n~~~~~~~~~~ea~-~l~~~~G~~~~~~~~~i~~~~ 279 (290)
+.... +.++.+.+..++..+|...++-.......-..+.. ..+.....++.|++ +.+.+.|++++.++....+.+
T Consensus 206 iAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel 285 (525)
T 3fr7_A 206 FAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGI 285 (525)
T ss_dssp EEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 33322 34788999999999998643222221111111111 11222222233444 667999999999999988875
Q ss_pred C
Q 022909 280 F 280 (290)
Q Consensus 280 ~ 280 (290)
+
T Consensus 286 ~ 286 (525)
T 3fr7_A 286 T 286 (525)
T ss_dssp H
T ss_pred H
Confidence 5
No 119
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.55 E-value=4.8e-14 Score=125.80 Aligned_cols=190 Identities=19% Similarity=0.179 Sum_probs=131.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc-------------cCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK-------------YQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~-------------~~~~~~~~~~~aDivv~~~p~ 137 (290)
.|||+|||+|.||..+|..|...|++|.+|+|+ ++.+.+.+.|+. ..++.++ ++++|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 489999999999999999999999999999996 456666665543 2346666 5889999999976
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEecCCC------------------hhHHHHHHHHHHHcCCcEEeC------ccCC
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVSTVD------------------GDTSKLINGHIKATGASFLEA------PVSG 193 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~------------------~~~~~~l~~~l~~~~~~~~~~------p~~~ 193 (290)
..++.++ +++.+.+++++++|.+..|- ....+.+.+.+.... ++.+ ...+
T Consensus 81 -~~~~~~~---~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~--v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 81 -PALESVA---AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRH--VLGCVVHLTCATVS 154 (335)
T ss_dssp -HHHHHHH---GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGG--EEEEEECCCEEESS
T ss_pred -hhHHHHH---HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCccc--EEEEEEEEEEEEcC
Confidence 6778887 55677888999999988773 223345556554332 2211 1111
Q ss_pred CCcc--ccCCceEEEe--cCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHH---------------------HH
Q 022909 194 SKKP--AEDGQLIFLA--AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNM---------------------IM 248 (290)
Q Consensus 194 ~~~~--~~~~~~~~~~--~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~---------------------~~ 248 (290)
+-.. ...+.+.+-. +.+.+..+.+.++|+..|.+++...+.....|.|++.|. ..
T Consensus 155 pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~ 234 (335)
T 3ghy_A 155 PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVS 234 (335)
T ss_dssp TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHH
T ss_pred CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHH
Confidence 1011 1122222211 123466788999999999988888888888888866432 23
Q ss_pred HHH-HHHHHHHHHHHHCCCCH
Q 022909 249 GRS-CTFSYSFLTLEFVDFLI 268 (290)
Q Consensus 249 ~~~-~~~~ea~~l~~~~G~~~ 268 (290)
.++ .++.|+..++++.|++.
T Consensus 235 ~l~~~~~~E~~~va~a~G~~~ 255 (335)
T 3ghy_A 235 AFCLAVMAEAKAIGARIGCPI 255 (335)
T ss_dssp HHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 445 78899999999999764
No 120
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.54 E-value=3.2e-14 Score=127.77 Aligned_cols=196 Identities=13% Similarity=0.129 Sum_probs=124.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-CC--------------ccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-GA--------------KYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g~--------------~~~~~~~~~~~~aDivv~~~ 135 (290)
.|+|+|||+|.||..+|..|...|++|.+|+|++++.+.+.+. ++ ...++++++++++|+|++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 5899999999999999999999999999999998887777654 22 24567888889999999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcC---CcEEe---CccCCCCcccc-------CCc
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG---ASFLE---APVSGSKKPAE-------DGQ 202 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~---~~~~~---~p~~~~~~~~~-------~~~ 202 (290)
|.+. ...++ +++.+.+++++++|++....... .++.+.+.+.+ +.+++ +|+.+...... .+.
T Consensus 84 ~~~~-~~~~~---~~l~~~l~~~~~vv~~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~ 158 (359)
T 1bg6_A 84 PAIH-HASIA---ANIASYISEGQLIILNPGATGGA-LEFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGA 158 (359)
T ss_dssp CGGG-HHHHH---HHHGGGCCTTCEEEESSCCSSHH-HHHHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSC
T ss_pred CchH-HHHHH---HHHHHhCCCCCEEEEcCCCchHH-HHHHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecc
Confidence 8754 46666 45667789999999884423333 33555565543 44544 55543221110 112
Q ss_pred eEEEe---cCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHH--------------------------------HHHH
Q 022909 203 LIFLA---AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV--------------------------------VNMI 247 (290)
Q Consensus 203 ~~~~~---~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~--------------------------------~n~~ 247 (290)
+.+-. +++++..+.+++++..+ ....+. |.|++ .+..
T Consensus 159 ~~~g~~~~~~~~~~~~~l~~~~~~~----~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
T 1bg6_A 159 MDFACLPAAKAGWALEQIGSVLPQY----VAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSV 230 (359)
T ss_dssp EEEEEESGGGHHHHHHHHTTTCTTE----EECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHH
T ss_pred eEEEeccccccHHHHHHHHHHhhhc----EEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHH
Confidence 11111 22334556666666443 112221 11111 1112
Q ss_pred HHHH-HHHHHHHHHHHHCCCCHHHHHHHHhhcC
Q 022909 248 MGRS-CTFSYSFLTLEFVDFLINTVTMFLQSFS 279 (290)
Q Consensus 248 ~~~~-~~~~ea~~l~~~~G~~~~~~~~~i~~~~ 279 (290)
..++ ..+.|+..++++.|++.+++.+.+....
T Consensus 231 ~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~ 263 (359)
T 1bg6_A 231 GSLAEKVDAERIAIAKAFDLNVPSVCEWYKESY 263 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCCHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHh
Confidence 3445 8889999999999999877777766543
No 121
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.51 E-value=3.3e-14 Score=124.98 Aligned_cols=111 Identities=20% Similarity=0.298 Sum_probs=88.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc--CCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY--QPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~--~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+++|+|||+|.||+.+++.+..+|++|++|||++++.+.+.+.|... ..+++++++++|+|++|+|. +++ +
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i--~ 229 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-----MIL--N 229 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----CCB--C
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----hhh--C
Confidence 79999999999999999999999999999999987666555556543 25788999999999999997 344 4
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCcc
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 191 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~ 191 (290)
++.++.|++++++||+++++.... + +.....++.+++.|.
T Consensus 230 ~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg 269 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPG 269 (300)
T ss_dssp HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCC
T ss_pred HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCC
Confidence 456788999999999999754432 2 445556788877763
No 122
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.51 E-value=2.8e-13 Score=120.10 Aligned_cols=188 Identities=15% Similarity=0.088 Sum_probs=129.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC---------------ccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA---------------KYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~---------------~~~~~~~~~~~~aDivv~~~ 135 (290)
.|+|+|||+|.||..+|..|...|++|.+|+|++ .+.+++.|+ ..+++.+++.+.+|+|++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 5899999999999999999999999999999986 255544332 22356666666899999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCC-------CCccccCCceEEEe-
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG-------SKKPAEDGQLIFLA- 207 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~- 207 (290)
|. ..++.++ +.+.+.+++++++|.+..|-. ..+.+.+.+... +++.++.+. ++. ...++-.+..
T Consensus 80 K~-~~~~~~l---~~l~~~l~~~t~Iv~~~nGi~-~~~~l~~~~~~~--~vl~g~~~~~a~~~~pg~v-~~~~~~~~~ig 151 (320)
T 3i83_A 80 KV-VEGADRV---GLLRDAVAPDTGIVLISNGID-IEPEVAAAFPDN--EVISGLAFIGVTRTAPGEI-WHQAYGRLMLG 151 (320)
T ss_dssp CC-CTTCCHH---HHHTTSCCTTCEEEEECSSSS-CSHHHHHHSTTS--CEEEEEEEEEEEEEETTEE-EEEEEEEEEEE
T ss_pred CC-CChHHHH---HHHHhhcCCCCEEEEeCCCCC-hHHHHHHHCCCC--cEEEEEEEeceEEcCCCEE-EECCCCEEEEe
Confidence 86 4455565 445677888999988876543 234555555433 344443322 111 1111112222
Q ss_pred ---cCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHH--------------------HHHH-HHHHHHHHHHHH
Q 022909 208 ---AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI--------------------MGRS-CTFSYSFLTLEF 263 (290)
Q Consensus 208 ---~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~--------------------~~~~-~~~~ea~~l~~~ 263 (290)
+.+.+..+.+.++|+..|.+++...+.....|.|++.|.. ..++ ..+.|+..++++
T Consensus 152 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~va~a 231 (320)
T 3i83_A 152 NYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAVAAA 231 (320)
T ss_dssp ESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 2345677889999999999998888988888988877642 1224 688899999999
Q ss_pred CCCCH
Q 022909 264 VDFLI 268 (290)
Q Consensus 264 ~G~~~ 268 (290)
.|++.
T Consensus 232 ~G~~l 236 (320)
T 3i83_A 232 NGHPL 236 (320)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 99873
No 123
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.50 E-value=1.1e-12 Score=115.75 Aligned_cols=187 Identities=17% Similarity=0.139 Sum_probs=124.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc--------------cCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK--------------YQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~--------------~~~~~~~~~~~aDivv~~~p 136 (290)
.|||+|||+|.||..+|..|...|++|++|+|++ .+.+++.|+. .+++.++ ++.+|+|++++|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk 78 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLK 78 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecC
Confidence 5899999999999999999999999999999986 3556554432 1245544 678999999997
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCC----cEEeCccCCCCcc--ccCCceEEEe--c
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA----SFLEAPVSGSKKP--AEDGQLIFLA--A 208 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~----~~~~~p~~~~~~~--~~~~~~~~~~--~ 208 (290)
. ..++.++ +.+.+.+++++++|.+..|-. ..+.+.+.+....+ .+..+-..++-.. ...+.+.+-. +
T Consensus 79 ~-~~~~~~l---~~l~~~l~~~~~iv~l~nGi~-~~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~ 153 (312)
T 3hn2_A 79 T-FANSRYE---ELIRPLVEEGTQILTLQNGLG-NEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLP 153 (312)
T ss_dssp G-GGGGGHH---HHHGGGCCTTCEEEECCSSSS-HHHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSC
T ss_pred C-CCcHHHH---HHHHhhcCCCCEEEEecCCCC-cHHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCC
Confidence 5 5566666 456677889999998866542 33456666644321 1111111111111 1112222211 1
Q ss_pred CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHH---------------------HHHH-HHHHHHHHHHHHCC
Q 022909 209 GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI---------------------MGRS-CTFSYSFLTLEFVD 265 (290)
Q Consensus 209 ~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~---------------------~~~~-~~~~ea~~l~~~~G 265 (290)
.+.+..+.+.++|+..|.+++...+.....|.|++-|.. ..++ ..+.|+..++++.|
T Consensus 154 ~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G 232 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQG 232 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcC
Confidence 235677889999999999998888888888888776653 1224 67789999999999
No 124
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.49 E-value=4.8e-13 Score=118.48 Aligned_cols=184 Identities=12% Similarity=0.157 Sum_probs=129.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC-------------ccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA-------------KYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~-------------~~~~~~~~~~~~aDivv~~~p~ 137 (290)
.++|+|||+|.||..+|..|...|++|.+| +++++.+.+.+.|. ...++.++ ++++|+|++++|.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilavk~ 96 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCVKS 96 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECCCG
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEccc
Confidence 689999999999999999999999999999 88877777766442 22345554 5889999999987
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe------CccCCCCc--cccCCceEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE------APVSGSKK--PAEDGQLIFLAAG 209 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~------~p~~~~~~--~~~~~~~~~~~~~ 209 (290)
. .++.++ +++.+.+++++++|++..|-.. .+.+.+.+. . .++. +...++-. ....+.+ ..+.
T Consensus 97 ~-~~~~~l---~~l~~~l~~~~~iv~~~nGi~~-~~~l~~~~~-~--~vl~g~~~~~a~~~gP~~~~~~~~g~~--~ig~ 166 (318)
T 3hwr_A 97 T-DTQSAA---LAMKPALAKSALVLSLQNGVEN-ADTLRSLLE-Q--EVAAAVVYVATEMAGPGHVRHHGRGEL--VIEP 166 (318)
T ss_dssp G-GHHHHH---HHHTTTSCTTCEEEEECSSSSH-HHHHHHHCC-S--EEEEEEEEEEEEEEETTEEEEEEEEEE--EECC
T ss_pred c-cHHHHH---HHHHHhcCCCCEEEEeCCCCCc-HHHHHHHcC-C--cEEEEEEEEeEEEcCCeEEEEcCCceE--EEcC
Confidence 4 778877 4567788899999988666543 245555553 1 1211 11111110 1112222 2333
Q ss_pred CHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHH---------------------HHH-HHHHHHHHHHHHCCCC
Q 022909 210 DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM---------------------GRS-CTFSYSFLTLEFVDFL 267 (290)
Q Consensus 210 ~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~---------------------~~~-~~~~ea~~l~~~~G~~ 267 (290)
.+..+.+.++|+..|.+++...+.....|.|++.|... .++ ..+.|+..++++.|++
T Consensus 167 -~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~ 245 (318)
T 3hwr_A 167 -TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVK 245 (318)
T ss_dssp -CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCC
Confidence 34457899999999999988889888999998877532 224 6778999999999976
No 125
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.45 E-value=1.5e-13 Score=124.79 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=84.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|+|+|.||+.+|+.++.+|++|+++|+++.+.......|.... +++++++++|+|+++. .+++++ +++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~-sL~eal~~ADVVilt~----gt~~iI--~~e 283 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL-LVEDVVEEAHIFVTTT----GNDDII--TSE 283 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CHHHHTTTCSEEEECS----SCSCSB--CTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec-CHHHHHhhCCEEEECC----CCcCcc--CHH
Confidence 899999999999999999999999999999999876655556676654 8999999999999743 345667 667
Q ss_pred ccccCCCCCEEEEecCCCh-hHHHHHHH
Q 022909 151 AASGMGPGKGYVDVSTVDG-DTSKLING 177 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~-~~~~~l~~ 177 (290)
.++.||+++++||++|+.+ ++.++|.+
T Consensus 284 ~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 284 HFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp TGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred HHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 8999999999999999986 66666654
No 126
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.43 E-value=1e-13 Score=125.59 Aligned_cols=100 Identities=18% Similarity=0.086 Sum_probs=84.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|+|+|.||+.+|++++.+|++|+++++++.+.......|.... +++++++++|+|+++.+ +++++ +++
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atg----t~~lI--~~e 319 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTG----NKDVI--TID 319 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCS----SSSSB--CHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCC----Ccccc--CHH
Confidence 899999999999999999999999999999998865544445666654 89999999999998743 35677 677
Q ss_pred ccccCCCCCEEEEecCCCh-hHHHHHHH
Q 022909 151 AASGMGPGKGYVDVSTVDG-DTSKLING 177 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~-~~~~~l~~ 177 (290)
.++.||+++++||++|+.. ++.++|.+
T Consensus 320 ~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 320 HMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp HHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred HHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 8999999999999999987 67666653
No 127
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.42 E-value=6e-13 Score=119.99 Aligned_cols=196 Identities=10% Similarity=-0.015 Sum_probs=133.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--------eEEEEeCCccch-----hhHHhC--------------CCccCCCHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--------DVTVWNRTKSKC-----DPLISL--------------GAKYQPSPDE 123 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--------~V~~~d~~~~~~-----~~~~~~--------------g~~~~~~~~~ 123 (290)
+.||+|||.|.+|.++|..|...|+ +|.+|.|+++.. +.+... ++..++++++
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHH
Confidence 5699999999999999999998764 599999986531 112211 2345678999
Q ss_pred HhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChh-------HHHHHHHHHHHcCCcEEeCccCCCCc
Q 022909 124 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-------TSKLINGHIKATGASFLEAPVSGSKK 196 (290)
Q Consensus 124 ~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~-------~~~~l~~~l~~~~~~~~~~p~~~~~~ 196 (290)
+++++|+|++++|. +.++.++ +++.+.++++..+|+++-|--. ..+.+.+.+. ..+.++..|.+..+.
T Consensus 114 al~~ad~ii~avPs-~~~r~~l---~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~-~~~~vLsGPs~A~EV 188 (391)
T 4fgw_A 114 SVKDVDIIVFNIPH-QFLPRIC---SQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELG-IQCGALSGANIATEV 188 (391)
T ss_dssp HHTTCSEEEECSCG-GGHHHHH---HHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHC-CEEEEEECSCCHHHH
T ss_pred HHhcCCEEEEECCh-hhhHHHH---HHhccccCCCceeEEeccccccccccchhHHHHHHHHhC-ccceeccCCchHHHh
Confidence 99999999999986 7788887 4567788899999999755321 2233333332 234567788887666
Q ss_pred cccCCceEEEecCCH---------HHHHHHHHHHHHhCCcEEEeCCc-----------------chHHHHHHHHHHHHHH
Q 022909 197 PAEDGQLIFLAAGDK---------SLYNTVAPLLDIMGKSRFYLGDV-----------------GNGAAMKLVVNMIMGR 250 (290)
Q Consensus 197 ~~~~~~~~~~~~~~~---------~~~~~v~~ll~~~G~~~~~~~~~-----------------g~a~~~k~~~n~~~~~ 250 (290)
.......+.+.+.++ ...+.++++|+.--++++...|. |....+++..|...++
T Consensus 189 a~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAAL 268 (391)
T 4fgw_A 189 AQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAI 268 (391)
T ss_dssp HTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHH
Confidence 555555444544322 12456788887777778777662 2222233445888888
Q ss_pred H-HHHHHHHHHHHHC---CCCHHHH
Q 022909 251 S-CTFSYSFLTLEFV---DFLINTV 271 (290)
Q Consensus 251 ~-~~~~ea~~l~~~~---G~~~~~~ 271 (290)
+ .+++|..+++... |-++.++
T Consensus 269 itrGl~Em~rlg~al~~~g~~~tt~ 293 (391)
T 4fgw_A 269 QRVGLGEIIRFGQMFFPESREETYY 293 (391)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCceee
Confidence 8 9999999999887 4444444
No 128
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.39 E-value=3.6e-12 Score=123.91 Aligned_cols=190 Identities=16% Similarity=0.184 Sum_probs=131.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC----------------------CCccCCCHHHHhhcC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL----------------------GAKYQPSPDEVAASC 128 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~----------------------g~~~~~~~~~~~~~a 128 (290)
-++|+|||+|.||..||..++..|++|+++|++++..+...+. .+...++.++ +++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-LSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-GGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-HhhC
Confidence 4799999999999999999999999999999998754432210 1223445544 7899
Q ss_pred CeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEec
Q 022909 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAA 208 (290)
Q Consensus 129 Divv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 208 (290)
|+||.++|.+.+++.-++ +++-+.+++++++-..+++-+++ ++.+.+... -+++....|.++.. -+++-++.
T Consensus 395 DlVIEAV~E~l~iK~~vf--~~le~~~~~~aIlASNTSsl~i~--~ia~~~~~p-~r~ig~HFfnP~~~---m~LVEvi~ 466 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCTNTSALNVD--DIASSTDRP-QLVIGTHFFSPAHV---MRLLEVIP 466 (742)
T ss_dssp SEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHHTTSSCG-GGEEEEECCSSTTT---CCEEEEEE
T ss_pred CEEEEeccccHHHHHHHH--HHHhhcCCCCceEEecCCcCChH--HHHhhcCCc-cccccccccCCCCC---CceEEEec
Confidence 999999999999987773 45566789999886544443333 455544322 34555444443332 23333333
Q ss_pred ---CCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHhh
Q 022909 209 ---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRSCTFSYSFLTLEFVDFLINTVTMFLQS 277 (290)
Q Consensus 209 ---~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~~~~~ea~~l~~~~G~~~~~~~~~i~~ 277 (290)
.+++.++.+.++.+.+|+.++.+.+.. +. +.|-+ +...+.|++.+.++ |.+++++++++..
T Consensus 467 g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~p-GF----i~NRi--~~~~~~ea~~l~~e-G~~~~~id~a~~~ 530 (742)
T 3zwc_A 467 SRYSSPTTIATVMSLSKKIGKIGVVVGNCY-GF----VGNRM--LAPYYNQGFFLLEE-GSKPEDVDGVLEE 530 (742)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEECCCST-TT----THHHH--HHHHHHHHHHHHHT-TCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcccCCCC-Cc----cHHHH--hhHHHHHHHHHHHc-CCCHHHHHHHHHH
Confidence 467999999999999999999887632 22 22211 11556888877766 7999999999875
No 129
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.33 E-value=1.2e-12 Score=118.52 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=78.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|+|+|.||+.+|+.++.+|++|+++|+++.+.......|... .+++++++++|+|+++ +. +++++ +++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~a-tg---t~~lI--~~e 292 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITC-TG---NKNVV--TRE 292 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEEC-SS---CSCSB--CHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEEC-CC---CcccC--CHH
Confidence 89999999999999999999999999999999986655555566654 4899999999999995 33 45677 567
Q ss_pred ccccCCCCCEEEEecCCChh
Q 022909 151 AASGMGPGKGYVDVSTVDGD 170 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~~ 170 (290)
.++.||+++++||++++.+.
T Consensus 293 ~l~~MK~gailINvgrg~~E 312 (435)
T 3gvp_A 293 HLDRMKNSCIVCNMGHSNTE 312 (435)
T ss_dssp HHHHSCTTEEEEECSSTTTT
T ss_pred HHHhcCCCcEEEEecCCCcc
Confidence 78999999999999999873
No 130
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.30 E-value=1.5e-12 Score=114.03 Aligned_cols=195 Identities=13% Similarity=0.036 Sum_probs=126.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc---cCCCHHHHh-hcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK---YQPSPDEVA-ASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~---~~~~~~~~~-~~aDivv~~~p~~~~~~~~~~ 146 (290)
.|+|+|||+|.||..++..|...|++|.+|+|+++..+.....|.. ...+..+.+ +.+|+|++++|. ..++.++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~-~~~~~~l- 79 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKT-HQLDAVI- 79 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCG-GGHHHHG-
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCc-cCHHHHH-
Confidence 5899999999999999999999999999999997654432223321 112333444 789999999965 6778877
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCC----cEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHH
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA----SFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLD 222 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~ 222 (290)
+++.+.+++++++|.+..|-...+. +....+ .+..+-..+ +.....++..+.. ++.+..+.+.++|+
T Consensus 80 --~~l~~~l~~~~~iv~~~nGi~~~~~-----~~~~~v~~g~~~~~a~~~~-pg~v~~~~~~~~~-~~~~~~~~l~~~l~ 150 (294)
T 3g17_A 80 --PHLTYLAHEDTLIILAQNGYGQLEH-----IPFKNVCQAVVYISGQKKG-DVVTHFRDYQLRI-QDNALTRQFRDLVQ 150 (294)
T ss_dssp --GGHHHHEEEEEEEEECCSSCCCGGG-----CCCSCEEECEEEEEEEEET-TEEEEEEEEEEEE-ECSHHHHHHHHHTT
T ss_pred --HHHHHhhCCCCEEEEeccCcccHhh-----CCCCcEEEEEEEEEEEEcC-CCEEEECCCEEec-CccHHHHHHHHHHH
Confidence 4556667788889988776544332 222111 111110111 1111111111222 34566688889999
Q ss_pred HhCCcEEEeCCcchHHHHHHHHHHHH--------------------HHH-HHHHHHHHHHHHCCCC--HHHHHHHHh
Q 022909 223 IMGKSRFYLGDVGNGAAMKLVVNMIM--------------------GRS-CTFSYSFLTLEFVDFL--INTVTMFLQ 276 (290)
Q Consensus 223 ~~G~~~~~~~~~g~a~~~k~~~n~~~--------------------~~~-~~~~ea~~l~~~~G~~--~~~~~~~i~ 276 (290)
.-|.+++...+.....|.|++-|... .++ ..+.|+..++++.|++ .+.+.+.+.
T Consensus 151 ~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~ 227 (294)
T 3g17_A 151 DSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMT 227 (294)
T ss_dssp TSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred hCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 88998988899988999898877632 123 5778999999999965 454555554
No 131
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.28 E-value=9.3e-13 Score=119.24 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=75.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCcc------CCCHHHHhhcCCeEEEEeCChh-HHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKY------QPSPDEVAASCDVTFAMLADPE-SAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~------~~~~~~~~~~aDivv~~~p~~~-~~~ 142 (290)
+++|+|+|+|.||+.+++.++.+|++|+++|+++++.+.+.+ .|... ..+++++++++|+|+.+++.+. .+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t~ 247 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAP 247 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCCc
Confidence 799999999999999999999999999999999887766655 44431 2356788889999999875433 455
Q ss_pred HHhcccccccccCCCCCEEEEec
Q 022909 143 DVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s 165 (290)
.++ .++.++.|+++.++||++
T Consensus 248 ~li--~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 248 KLV--SNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCB--CHHHHTTSCTTCEEEEGG
T ss_pred cee--cHHHHhcCCCCcEEEEEe
Confidence 555 456678899999999998
No 132
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.23 E-value=7.6e-12 Score=110.42 Aligned_cols=110 Identities=16% Similarity=0.271 Sum_probs=89.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CC-eEEEEeCCccchhhHHhC-C--CccCCCHHHHhhcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GC-DVTVWNRTKSKCDPLISL-G--AKYQPSPDEVAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~-~V~~~d~~~~~~~~~~~~-g--~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~ 145 (290)
.++|+|||+|.||+.+++.|... |+ +|.+|||++++.+.+.+. + +..+++++++++++|+|++++|.. +.++
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v~ 211 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPIL 211 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCCB
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cccc
Confidence 58999999999999999999765 76 899999999888877663 5 667789999999999999999852 3444
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeC
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 189 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~ 189 (290)
.. +.+++|++++++++..+.. .++.+.+.+++..|++.
T Consensus 212 --~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 212 --FG---EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDS 249 (312)
T ss_dssp --CG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESC
T ss_pred --CH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECC
Confidence 11 5789999999998777754 66777777778889983
No 133
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.22 E-value=2.5e-11 Score=112.73 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=84.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++|+|+|+|.||+.+++.++.+|++|+++|+++.+.+...+.|+.. .+++++++++|+|+.+++.. +++ +.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~----~~i--~~~ 346 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNK----DII--MLE 346 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSS----CSB--CHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCH----HHH--HHH
Confidence 89999999999999999999999999999999998777666777764 47889999999999998643 344 335
Q ss_pred ccccCCCCCEEEEecCCCh-hHHHHHHH
Q 022909 151 AASGMGPGKGYVDVSTVDG-DTSKLING 177 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~~-~~~~~l~~ 177 (290)
.++.|+++++++|++++.. ++..++..
T Consensus 347 ~l~~mk~ggilvnvG~~~~eId~~aL~~ 374 (494)
T 3ce6_A 347 HIKAMKDHAILGNIGHFDNEIDMAGLER 374 (494)
T ss_dssp HHHHSCTTCEEEECSSSGGGBCHHHHHH
T ss_pred HHHhcCCCcEEEEeCCCCCccCHHHHHH
Confidence 6788999999999999887 66666655
No 134
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.13 E-value=5.4e-11 Score=103.07 Aligned_cols=109 Identities=24% Similarity=0.273 Sum_probs=83.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhH--HHHHhcc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPES--AMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~--~~~~~~~ 147 (290)
+++|+|||+|.||+++++.|...|++|.+++|++++.+.+.+ .++...++++++++++|+|++++|.... +...+
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i-- 206 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIF-- 206 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSS--
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCC--
Confidence 689999999999999999999999999999999887766654 3555555788889999999999997542 11222
Q ss_pred cccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 148 KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+ .+.++++.+++|++. . ...+.+..++.++.+++
T Consensus 207 ~---~~~l~~g~~viDv~~---~-~t~ll~~a~~~g~~~v~ 240 (275)
T 2hk9_A 207 N---YDLIKKDHVVVDIIY---K-ETKLLKKAKEKGAKLLD 240 (275)
T ss_dssp C---GGGCCTTSEEEESSS---S-CCHHHHHHHHTTCEEEC
T ss_pred C---HHHcCCCCEEEEcCC---C-hHHHHHHHHHCcCEEEC
Confidence 1 356889999999987 2 22455566666766654
No 135
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.12 E-value=1.4e-10 Score=99.82 Aligned_cols=108 Identities=20% Similarity=0.155 Sum_probs=83.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhH--HHHHhcc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPES--AMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~--~~~~~~~ 147 (290)
+ +|+|||+|.||+++++.|...|++|.++||++++.+.+.+ .+.. .++++++ +++|+|++++|.+.. +...+
T Consensus 117 ~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l-- 191 (263)
T 2d5c_A 117 G-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPL-- 191 (263)
T ss_dssp S-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSS--
T ss_pred C-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCC--
Confidence 7 9999999999999999999999999999999877666654 3444 4578888 999999999997631 21222
Q ss_pred cccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 148 KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. .+.++++++++|++.... .+ .+.+.+++.++.+++
T Consensus 192 ~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~~~v~ 227 (263)
T 2d5c_A 192 P---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGLKVQT 227 (263)
T ss_dssp C---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTCEEEC
T ss_pred C---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcCEEEC
Confidence 1 456889999999987643 33 477777777776664
No 136
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.12 E-value=1.9e-11 Score=107.64 Aligned_cols=167 Identities=17% Similarity=0.132 Sum_probs=103.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCC----------HHHHhhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPS----------PDEVAASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~----------~~~~~~~aDivv~~~p~~~~ 140 (290)
.|||+|||+|.||..++..|. .|++|.+++|++++.+.+++.|+....+ .++..+.+|+|++++|. ..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~ 79 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQ 79 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GG
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HH
Confidence 589999999999999999999 9999999999987777777655533211 12456789999999965 66
Q ss_pred HHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeC-ccCC----CCc---cccCCceEEEe-cCCH
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA-PVSG----SKK---PAEDGQLIFLA-AGDK 211 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~-p~~~----~~~---~~~~~~~~~~~-~~~~ 211 (290)
+..++ +.+. .+.+++ +|.+..|-.. .+.+.+.+... +++.+ ...+ ++. ....+.+.+-. .+..
T Consensus 80 ~~~~l---~~l~-~~~~~~-ivs~~nGi~~-~e~l~~~~~~~--~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~ 151 (307)
T 3ego_A 80 LQSVF---SSLE-RIGKTN-ILFLQNGMGH-IHDLKDWHVGH--SIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAE 151 (307)
T ss_dssp HHHHH---HHTT-SSCCCE-EEECCSSSHH-HHHHHTCCCSC--EEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCC
T ss_pred HHHHH---HHhh-cCCCCe-EEEecCCccH-HHHHHHhCCCC--cEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCc
Confidence 77776 2233 345666 7777665543 23333333221 22221 1110 110 01223332211 1223
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHH
Q 022909 212 SLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI 247 (290)
Q Consensus 212 ~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~ 247 (290)
+..+.+.+.|+..|..+....+.....|.|++.|..
T Consensus 152 ~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~ 187 (307)
T 3ego_A 152 PDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNAC 187 (307)
T ss_dssp GGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhh
Confidence 334455556666677787888899999999988764
No 137
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.11 E-value=7.8e-11 Score=105.60 Aligned_cols=93 Identities=23% Similarity=0.385 Sum_probs=76.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCC-------------------------CHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQP-------------------------SPDEVA 125 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~-------------------------~~~~~~ 125 (290)
+.+|+|||+|.||...++.+..+|.+|+++|+++++.+.+.+.|..+.+ ++++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 6899999999999999999999999999999999988887776665432 467888
Q ss_pred hcCCeEEEEeCCh-hHHHHHhcccccccccCCCCCEEEEec
Q 022909 126 ASCDVTFAMLADP-ESAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 126 ~~aDivv~~~p~~-~~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
+++|+||.++..+ .....++ .++.++.|++|++|||++
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lv--t~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLV--TAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCB--CHHHHHTSCTTCEEEETT
T ss_pred hcCCEEEECCCCCCcccceee--cHHHHhcCCCCcEEEEEe
Confidence 9999999886322 2234455 567789999999999997
No 138
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.08 E-value=4.1e-10 Score=95.26 Aligned_cols=110 Identities=17% Similarity=0.247 Sum_probs=83.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeE-EEEeCCccchhhHHhCCCccCCCHHHHh-hcCCeEEEEeCChhHHHHHhcccc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVA-ASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+||||||+|.||+.+++.+...|+++ .+||+++ +.+. .++++++++ .++|+|++++|.... ...+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~-~~~~---- 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAV-KDYA---- 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHH-HHHH----
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHH-HHHH----
Confidence 47999999999999999999889987 6999885 3221 456899998 689999999986533 3333
Q ss_pred cccccCCCCCEEEEecCCChhHH---HHHHHHHHHcCCc-EEeCccCCCCc
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTS---KLINGHIKATGAS-FLEAPVSGSKK 196 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~---~~l~~~l~~~~~~-~~~~p~~~~~~ 196 (290)
...++.|..+|+.+.+..... +++.+..++.+.. +++.++.++..
T Consensus 68 --~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 68 --EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp --HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHH
T ss_pred --HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChH
Confidence 345678999998887665444 6788888777777 56777776543
No 139
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.07 E-value=4.1e-10 Score=87.22 Aligned_cols=104 Identities=22% Similarity=0.289 Sum_probs=81.9
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+ |+||..+++.|.+.|++|+.++++.+.. .|...+.+++|+.+..|++++++| ++....++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~- 86 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA- 86 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH-
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH-
Confidence 689999999 9999999999999999977777664322 467778899999889999999999 57777777
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+ ...+.++++.++. .+++.+.+++.|+++++
T Consensus 87 --~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 87 --KEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp --HHHHH-TTCCEEEECTTSC----CHHHHHHHHHHTCEEEC
T ss_pred --HHHHH-cCCCEEEEcCccH----HHHHHHHHHHCCCEEEc
Confidence 23333 4456666666442 57888888889999987
No 140
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.06 E-value=1.4e-10 Score=90.56 Aligned_cols=88 Identities=17% Similarity=0.276 Sum_probs=71.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCc--cCCCHHHHhhcCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAK--YQPSPDEVAASCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~--~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~ 147 (290)
+++|+|||+|.||+.+++.|...|++|.+++|++++.+.+.+ .+.. ..++++++++++|+|+.++|.+. .++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~---~~~-- 95 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT---PIV-- 95 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS---CSB--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC---cEe--
Confidence 689999999999999999999999999999999988776554 3433 45688899999999999998752 223
Q ss_pred cccccccCCCCCEEEEecC
Q 022909 148 KHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~ 166 (290)
. .+.++++.+++|++.
T Consensus 96 ~---~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 96 E---ERSLMPGKLFIDLGN 111 (144)
T ss_dssp C---GGGCCTTCEEEECCS
T ss_pred e---HHHcCCCCEEEEccC
Confidence 1 256788999999875
No 141
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.06 E-value=1.9e-10 Score=103.97 Aligned_cols=93 Identities=23% Similarity=0.294 Sum_probs=75.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----------------------------CCH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----------------------------PSP 121 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----------------------------~~~ 121 (290)
+.+|+|||+|.+|...++.+..+|.+|+++|+++.+.+.+.+.|..+. .++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 689999999999999999999999999999999988777776665422 146
Q ss_pred HHHhhcCCeEEEEeCChh-HHHHHhcccccccccCCCCCEEEEec
Q 022909 122 DEVAASCDVTFAMLADPE-SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 122 ~~~~~~aDivv~~~p~~~-~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
+++++++|+||.++..+. ....++ .++.++.||+|++|||++
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lv--t~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLV--TREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCB--CHHHHTTSCTTCEEEETT
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEe--cHHHHhcCCCCCEEEEEe
Confidence 778899999998853221 234555 567789999999999997
No 142
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.00 E-value=3.9e-10 Score=102.68 Aligned_cols=97 Identities=16% Similarity=0.248 Sum_probs=76.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCC---------------------------CHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQP---------------------------SPDE 123 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~---------------------------~~~~ 123 (290)
+.+|+|+|+|.+|...++.+..+|++|+++|+++++.+.+.+.|...+. ++++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999887777666665442 2667
Q ss_pred HhhcCCeEEEE--eCChhHHHHHhcccccccccCCCCCEEEEec--CCChh
Q 022909 124 VAASCDVTFAM--LADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGD 170 (290)
Q Consensus 124 ~~~~aDivv~~--~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~ 170 (290)
+++++|+||.+ +|.. .+..++ .++.++.|+++.+|||++ ++..+
T Consensus 252 ~~~~aDvVI~~~~~pg~-~ap~li--~~~~l~~mk~g~vIVdva~~~Gg~v 299 (401)
T 1x13_A 252 QAKEVDIIVTTALIPGK-PAPKLI--TREMVDSMKAGSVIVDLAAQNGGNC 299 (401)
T ss_dssp HHHHCSEEEECCCCTTS-CCCCCB--CHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred HhCCCCEEEECCccCCC-CCCeee--CHHHHhcCCCCcEEEEEcCCCCCCc
Confidence 78899999999 4431 233444 345678899999999998 54433
No 143
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=98.95 E-value=8.8e-10 Score=98.13 Aligned_cols=107 Identities=16% Similarity=0.188 Sum_probs=83.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhh-cCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAA-SCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+++|+|+|+|+||+.+|+.+..+|++|+++|+++++.+...+.+.... +.++++. +||+++.| .+.+.+ ++
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~-----A~~~~I--~~ 246 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC-----AMGGVI--TT 246 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC-----SCSCCB--CH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh-----HHHhhc--CH
Confidence 899999999999999999999999999999998765222334566655 6778887 89999743 345566 45
Q ss_pred cccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+.++.|+ ..+|+|.++++..++++ .+.|+++++.++
T Consensus 247 ~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIlv~ 282 (355)
T 1c1d_A 247 EVARTLD-CSVVAGAANNVIADEAA-SDILHARGILYA 282 (355)
T ss_dssp HHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCEEC
T ss_pred HHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEEEE
Confidence 5566776 68999999998877556 588888887664
No 144
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.92 E-value=3e-09 Score=93.95 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=70.7
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHH----h--------CCCccCCCHHHHhhcCCeEEEEeC
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLI----S--------LGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~----~--------~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
+.+||+|||+|.||..+|..|+..|+ +|.+||+++++.+... . ..+..+++. +.++++|+|+++++
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 36899999999999999999999998 9999999987655421 0 122333566 67899999999993
Q ss_pred --------------ChhH-HHHHhcccccccccCCCCCEEEEecCCChhHHHHHHH
Q 022909 137 --------------DPES-AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLING 177 (290)
Q Consensus 137 --------------~~~~-~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~ 177 (290)
.+.. .+.++ +++.+. .+++++|+.|.........+.+
T Consensus 82 ~p~~~g~~r~d~~~~~~~i~~~i~---~~i~~~-~~~~iii~~sNp~~~~~~~~~~ 133 (317)
T 2ewd_A 82 IPGRPKDDRSELLFGNARILDSVA---EGVKKY-CPNAFVICITNPLDVMVSHFQK 133 (317)
T ss_dssp CSSCCSSCGGGGHHHHHHHHHHHH---HHHHHH-CTTSEEEECCSSHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHhhHHHHHHHH---HHHHHH-CCCcEEEEeCChHHHHHHHHHH
Confidence 2222 23333 223333 4689999987754444444444
No 145
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.91 E-value=5.4e-09 Score=91.80 Aligned_cols=111 Identities=13% Similarity=0.110 Sum_probs=83.2
Q ss_pred CCeEEEEcccHhHHH-HHHHHHH-CCCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLK-AGCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~-~g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.+||||||+|.||+. +++.+.. .+.++. ++|+++++.+.+++ .|+..++++++++++.|+|++++|.......+.
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~- 84 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIK- 84 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHH-
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHH-
Confidence 589999999999996 8888876 467766 89999988777665 577668899999999999999999866554433
Q ss_pred ccccccccCCCCCEEEE--ecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKGYVD--VSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin--~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..++.|..++- -......+.+++.+..++.++.+.-
T Consensus 85 ------~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 85 ------ILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp ------HHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ------HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 23445555442 1345667778888888887766543
No 146
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.90 E-value=2.3e-09 Score=97.72 Aligned_cols=91 Identities=11% Similarity=0.055 Sum_probs=70.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CCCeEEEEe---CCccchhhH-HhCC------------------C-ccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AGCDVTVWN---RTKSKCDPL-ISLG------------------A-KYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g~~V~~~d---~~~~~~~~~-~~~g------------------~-~~~~~~~~~~~ 126 (290)
.|+|+|||+|.||..+|..|+. .|++|.+|+ |++++.+.+ ++.+ + ..+++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4799999999999999999987 599999999 766665552 3222 1 14457888889
Q ss_pred cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEec
Q 022909 127 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 127 ~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
++|+|++++|.. ..+.++ +++.+.++++++|++..
T Consensus 82 ~aD~Vilav~~~-~~~~v~---~~l~~~l~~~~ivv~~~ 116 (404)
T 3c7a_A 82 GADVVILTVPAF-AHEGYF---QAMAPYVQDSALIVGLP 116 (404)
T ss_dssp TCSEEEECSCGG-GHHHHH---HHHTTTCCTTCEEEETT
T ss_pred CCCEEEEeCchH-HHHHHH---HHHHhhCCCCcEEEEcC
Confidence 999999999874 466776 45667788899988853
No 147
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.90 E-value=1.3e-09 Score=85.15 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=79.8
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHCCCeEEEEeCCc--cchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKAGCDVTVWNRTK--SKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~g~~V~~~d~~~--~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
.++|+|||+ |++|..+++.|...|++|+.+|++. +.. .|...+.+++|+.+..|++++++|. +.+..+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v 86 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNS-EAAWGV 86 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCS-THHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHH
Confidence 478999999 8999999999999999977777654 322 4677777888888889999999995 777777
Q ss_pred hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+ ++..+ ...+.++++.++. .+++.+.+++.|++++.
T Consensus 87 ~---~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 87 A---QEAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp H---HHHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred H---HHHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 7 22333 3455666665332 67888888889999985
No 148
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.89 E-value=3e-09 Score=96.40 Aligned_cols=93 Identities=19% Similarity=0.288 Sum_probs=73.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC--CC---------------------------H
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ--PS---------------------------P 121 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~--~~---------------------------~ 121 (290)
+++|+|+|+|.+|..+++.++.+|++|+++|+++++.+.+.+.|.... +. +
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l 251 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 251 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence 799999999999999999999999999999999988777766665443 11 6
Q ss_pred HHHhhcCCeEEEEeCChh-HHHHHhcccccccccCCCCCEEEEec
Q 022909 122 DEVAASCDVTFAMLADPE-SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 122 ~~~~~~aDivv~~~p~~~-~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
+++++++|+||.+++.+. ....++ .++.++.|+++.++||++
T Consensus 252 ~~~~~~aDvVi~~~~~pg~~~~~li--~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 252 LKELVKTDIAITTALIPGKPAPVLI--TEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHTTCSEEEECCCCTTSCCCCCS--CHHHHTTSCTTCEEEETT
T ss_pred HHHhCCCCEEEECCccCCCCCCeee--CHHHHhcCCCCCEEEEEe
Confidence 677889999998883221 122344 345578899999999998
No 149
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.89 E-value=1.8e-09 Score=97.33 Aligned_cols=94 Identities=23% Similarity=0.319 Sum_probs=71.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCcc------CCCHHHHhhcCCeEEEEeCChh-HHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKY------QPSPDEVAASCDVTFAMLADPE-SAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~------~~~~~~~~~~aDivv~~~p~~~-~~~ 142 (290)
+++|+|+|+|.||+.+++.++.+|++|+++|+++++.+.+.+ .+... ..+++++++++|+|+.+++.+. .+.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~ 245 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAP 245 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccc
Confidence 799999999999999999999999999999999887766654 44321 2346677889999999998654 455
Q ss_pred HHhcccccccccCCCCCEEEEecC
Q 022909 143 DVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.++ .++.++.|+++.++||++.
T Consensus 246 ~li--~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 246 KLV--TRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp CCS--CHHHHTTSCTTCEEEECC-
T ss_pred hhH--HHHHHHhhcCCCEEEEEec
Confidence 555 4556788999999999974
No 150
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.89 E-value=6.9e-10 Score=99.19 Aligned_cols=112 Identities=16% Similarity=0.218 Sum_probs=83.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CC-CeEEEEeCCccchhhHHhC-----C--CccCCCHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AG-CDVTVWNRTKSKCDPLISL-----G--AKYQPSPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g-~~V~~~d~~~~~~~~~~~~-----g--~~~~~~~~~~~~~aDivv~~~p~~~~~ 141 (290)
.++|+|||+|.+|+.+++.+.. .+ .+|.+|||++++.+.+.+. | +..+++++++++++|+|++++|.+. .
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~-~ 207 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA-Y 207 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-E
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-C
Confidence 5799999999999999998754 44 5899999999888877653 5 3456789999999999999998752 2
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 189 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~ 189 (290)
..++ . .+++++|++++++++..+. ..++...+..++..|++.
T Consensus 208 ~pvl--~---~~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~ 249 (350)
T 1x7d_A 208 ATII--T---PDMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEY 249 (350)
T ss_dssp EEEE--C---GGGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESS
T ss_pred Ccee--c---HHHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECC
Confidence 2333 1 2578999999999876665 344445555555567764
No 151
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.88 E-value=4.3e-09 Score=78.44 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=70.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC-CeEEEEeCCccchhhHHhCCCccC-------CCHHHHhhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~~aDivv~~~p~~~~~~ 142 (290)
+++|+|+|+|.||+.+++.|...| ++|.+++|++++.+.+...++... .++.++++++|+|+.++|.. ...
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-~~~ 83 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-LTP 83 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-GHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-hhH
Confidence 689999999999999999999999 899999999887776664443211 23456677899999998753 334
Q ss_pred HHhcccccccccCCCCCEEEEecCCChhHHHHHHHH
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGH 178 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~ 178 (290)
.++ ....+.+...++.+ +.+...+.+.+.
T Consensus 84 ~~~------~~~~~~g~~~~~~~-~~~~~~~~~~~~ 112 (118)
T 3ic5_A 84 IIA------KAAKAAGAHYFDLT-EDVAATNAVRAL 112 (118)
T ss_dssp HHH------HHHHHTTCEEECCC-SCHHHHHHHHHH
T ss_pred HHH------HHHHHhCCCEEEec-CcHHHHHHHHHH
Confidence 443 12234566777774 444445555443
No 152
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.87 E-value=8.3e-09 Score=92.38 Aligned_cols=112 Identities=19% Similarity=0.243 Sum_probs=83.8
Q ss_pred CCCCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHh--hcCCeEEEEeCChhHHHH
Q 022909 69 ELPGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVA--ASCDVTFAMLADPESAMD 143 (290)
Q Consensus 69 ~~~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~--~~aDivv~~~p~~~~~~~ 143 (290)
++.+||||||+|.||+.+++.+... ++++. ++|+++++.+.+.+ .|+..++++++++ .+.|+|++++|...+...
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 82 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEV 82 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHH
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 3457999999999999999999876 67754 88999988777654 5777788999999 468999999998666544
Q ss_pred HhcccccccccCCCCCEEEE-ec-CCChhHHHHHHHHHHHcCCcEE
Q 022909 144 VACGKHGAASGMGPGKGYVD-VS-TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin-~s-~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+. ..++.|..++- -- .....+.+++.+..++.++.+.
T Consensus 83 ~~-------~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~ 121 (354)
T 3db2_A 83 IE-------QCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFL 121 (354)
T ss_dssp HH-------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEE
T ss_pred HH-------HHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 43 33445654443 22 4556677888888888776554
No 153
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.87 E-value=2.5e-08 Score=76.58 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=71.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCcc----CCCHHHH----hhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKY----QPSPDEV----AASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~----~~~~~~~----~~~aDivv~~~p~~~~~ 141 (290)
+|+|+|+|+|.+|+.+++.|...|++|.++|+++++.+.+.+ .+... ..+.+.+ ++++|+|++++|.+...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 589999999999999999999999999999999887766654 35432 1123222 56799999999875433
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCc
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 190 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p 190 (290)
..+. ...+.++++.+++..+.. ... +.+++.|+.++-+|
T Consensus 84 ~~~~----~~~~~~~~~~ii~~~~~~--~~~----~~l~~~g~~~v~~p 122 (140)
T 1lss_A 84 LMSS----LLAKSYGINKTIARISEI--EYK----DVFERLGVDVVVSP 122 (140)
T ss_dssp HHHH----HHHHHTTCCCEEEECSST--THH----HHHHHTTCSEEECH
T ss_pred HHHH----HHHHHcCCCEEEEEecCH--hHH----HHHHHcCCCEEECH
Confidence 3222 234446666666544322 222 24445565554443
No 154
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=1.1e-08 Score=90.74 Aligned_cols=110 Identities=16% Similarity=0.194 Sum_probs=83.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~ 145 (290)
++||||||+|.||+.+++.+... ++++. ++|+++++.+.+++ .++. +++++++++ +.|+|++++|.......+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 81 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIE 81 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHH
Confidence 57999999999999999999885 67766 79999988777655 6777 789999998 7999999998866554443
Q ss_pred cccccccccCCCCCEEEE-e-cCCChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKGYVD-V-STVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin-~-s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..++.|..++- - ......+.+++.+..++.++.+.-
T Consensus 82 -------~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 82 -------RFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp -------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred -------HHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 23445554442 2 245566777888888888766543
No 155
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.86 E-value=1.6e-08 Score=81.74 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=75.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEEEEeCCccchhhHHhCCCccC----CCH---HHH--hhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLISLGAKYQ----PSP---DEV--AASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~~g~~~~----~~~---~~~--~~~aDivv~~~p~~~~ 140 (290)
+++|.|+|+|.+|+.+++.|... |++|.++|+++++.+.+.+.|.... .+. .++ ++++|+|++++|.+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~ 118 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQG 118 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHH
Confidence 67899999999999999999998 9999999999988887777665422 222 233 5678999999988666
Q ss_pred HHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCc
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 190 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p 190 (290)
...++. ....+.+...+|..+. .... .+.+.+.|+.++..|
T Consensus 119 ~~~~~~----~~~~~~~~~~ii~~~~-~~~~----~~~l~~~G~~~vi~p 159 (183)
T 3c85_A 119 NQTALE----QLQRRNYKGQIAAIAE-YPDQ----LEGLLESGVDAAFNI 159 (183)
T ss_dssp HHHHHH----HHHHTTCCSEEEEEES-SHHH----HHHHHHHTCSEEEEH
T ss_pred HHHHHH----HHHHHCCCCEEEEEEC-CHHH----HHHHHHcCCCEEEch
Confidence 555541 2444555555554433 2222 234455566655443
No 156
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.81 E-value=1.7e-08 Score=90.38 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
++||||||+|.||+.+++.+... ++++. ++|+++++.+.+.+ .|+..+++++++++ +.|+|++++|.......+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 92 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQS 92 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 47899999999999999999887 67755 89999988777655 57888889999997 789999999876554433
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
. ..++.|..++.-- .....+.+++.+..++.+..+.
T Consensus 93 ~-------~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 93 I-------ECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp H-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred H-------HHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 3 2344565554321 3455667788888887776654
No 157
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.81 E-value=5.4e-09 Score=93.59 Aligned_cols=107 Identities=13% Similarity=0.184 Sum_probs=79.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCccCCCHHHHhh-cCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAA-SCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~-~aDivv~~~p~~~~~~~~~~~~ 148 (290)
+++|+|+|+|+||+.+|+.|..+|++|+++|+++++.+++.+ .+.... +.++++. +||+++.|. +.+++ +
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a-----~~~~I--~ 244 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCA-----LGAVL--N 244 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECS-----CSCCB--S
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccc-----hHHHh--C
Confidence 899999999999999999999999999999999887766555 366555 5566666 899998764 23344 3
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
.+.++.+ ...+|++.++++..+. +..+.|.++++.++
T Consensus 245 ~~~~~~l-g~~iV~e~An~p~t~~-ea~~~L~~~Gi~~~ 281 (364)
T 1leh_A 245 DFTIPQL-KAKVIAGSADNQLKDP-RHGKYLHELGIVYA 281 (364)
T ss_dssp TTHHHHC-CCSEECCSCSCCBSSH-HHHHHHHHHTCEEC
T ss_pred HHHHHhC-CCcEEEeCCCCCcccH-HHHHHHHhCCCEEe
Confidence 3345556 3467777777665443 46677888887664
No 158
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.80 E-value=3.4e-08 Score=76.42 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC----CCHHHH----hhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ----PSPDEV----AASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~----~~~~~~----~~~aDivv~~~p~~~~~~ 142 (290)
..+|.|+|+|.+|+.+++.|...|++|+++|+++++.+.+.+.|+... .+.+.+ ++++|+|++++|.+....
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 578999999999999999999999999999999998888877666422 222222 357999999999876655
Q ss_pred HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
.+.. ....+.++..+|-..+ .. .-.+.+++.|+..+
T Consensus 87 ~~~~----~a~~~~~~~~iiar~~-~~----~~~~~l~~~G~d~v 122 (140)
T 3fwz_A 87 EIVA----SARAKNPDIEIIARAH-YD----DEVAYITERGANQV 122 (140)
T ss_dssp HHHH----HHHHHCSSSEEEEEES-SH----HHHHHHHHTTCSEE
T ss_pred HHHH----HHHHHCCCCeEEEEEC-CH----HHHHHHHHCCCCEE
Confidence 4441 2334445555553322 11 22345555566544
No 159
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.80 E-value=1.9e-08 Score=89.63 Aligned_cols=133 Identities=16% Similarity=0.160 Sum_probs=93.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~ 145 (290)
+++|||||+|.||+.+++.+... ++++. ++|+++++.+.+.+ .|...+++++++++ +.|+|++++|.......+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 83 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLIT 83 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHH
Confidence 57999999999999999999886 67765 89999988777655 57777889999998 7999999998866554443
Q ss_pred cccccccccCCCCCEE-EEec-CCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHH
Q 022909 146 CGKHGAASGMGPGKGY-VDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDI 223 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~l-in~s-~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~ 223 (290)
..++.|..+ +.-- .....+.+++.++.++.++.+.-..... -...+..++++++.
T Consensus 84 -------~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r----------------~~p~~~~~k~~i~~ 140 (344)
T 3euw_A 84 -------RAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRR----------------FDPSFAAINARVAN 140 (344)
T ss_dssp -------HHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGG----------------GCHHHHHHHHHHHT
T ss_pred -------HHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhh----------------cCHHHHHHHHHHhc
Confidence 223444433 3322 4456677788888887776554322211 11345677777765
Q ss_pred --hCC
Q 022909 224 --MGK 226 (290)
Q Consensus 224 --~G~ 226 (290)
+|.
T Consensus 141 g~iG~ 145 (344)
T 3euw_A 141 QEIGN 145 (344)
T ss_dssp TTTSS
T ss_pred CCCCc
Confidence 665
No 160
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.80 E-value=4.3e-09 Score=90.90 Aligned_cols=110 Identities=16% Similarity=0.081 Sum_probs=79.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCc--cCCCHHHHhhcCCeEEEEeCChh--HHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAK--YQPSPDEVAASCDVTFAMLADPE--SAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~--~~~~~~~~~~~aDivv~~~p~~~--~~~~~~ 145 (290)
++++.|+|+|.+|++++..|...|. +|++++|++++.+.+.+. +. ..+++.++++++|+||.++|... .....+
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l 195 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-INKINLSHAESHLDEFDIIINTTPAGMNGNTDSVI 195 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-CEEECHHHHHHTGGGCSEEEECCC-------CCSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-cccccHhhHHHHhcCCCEEEECccCCCCCCCcCCC
Confidence 7899999999999999999999998 899999999887665432 22 22345666789999999998642 111112
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. .+.++++.+++|+...+.. + .+.+..++.|+..++
T Consensus 196 --~---~~~l~~~~~V~D~vY~P~~-T-~ll~~A~~~G~~~~~ 231 (277)
T 3don_A 196 --S---LNRLASHTLVSDIVYNPYK-T-PILIEAEQRGNPIYN 231 (277)
T ss_dssp --C---CTTCCSSCEEEESCCSSSS-C-HHHHHHHHTTCCEEC
T ss_pred --C---HHHcCCCCEEEEecCCCCC-C-HHHHHHHHCcCEEeC
Confidence 1 4567899999999877444 3 467777777776654
No 161
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.79 E-value=1.7e-08 Score=90.31 Aligned_cols=110 Identities=15% Similarity=0.196 Sum_probs=82.2
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
.+||||||+|.||+ .+++.+... +++|. ++|+++++.+.+.+ .|+..+++++++++ +.|+|++++|.......+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 106 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWI 106 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 47999999999998 789998876 67765 88999888777655 57877789999997 489999999886655443
Q ss_pred hcccccccccCCCCCEEE-Eec-CCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKGYV-DVS-TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~li-n~s-~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
. ..++.|+.++ .-- .....+.+++.++.++.++.+.
T Consensus 107 ~-------~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 144 (350)
T 3rc1_A 107 D-------RALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLM 144 (350)
T ss_dssp H-------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred H-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 3 3345565544 221 4566777888888888876654
No 162
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.79 E-value=3.1e-08 Score=88.93 Aligned_cols=109 Identities=20% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~ 146 (290)
..+|||||+|.||+..++.+... +.+|. ++|+++++.+..++.|+..+++++++++ +.|+|++++|.......+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~- 83 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAI- 83 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHH-
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-
Confidence 47899999999999999999876 66765 7899988876655678888899999998 6899999998766554433
Q ss_pred ccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcE
Q 022909 147 GKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~ 186 (290)
..++.|+.++-- -.....+.+++.+..++.++.+
T Consensus 84 ------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 84 ------SALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp ------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred ------HHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 334566655432 1455667788888888877654
No 163
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.78 E-value=3.7e-09 Score=95.11 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=82.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC------ccCCCHHHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA------KYQPSPDEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~------~~~~~~~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
+++|+|||+|.||+.+++.|... ++|.++||++++.+.+.+... ...++++++++++|+|+.++|..... .+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~-~v 93 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF-KS 93 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH-HH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH-HH
Confidence 68999999999999999999888 899999999988877665321 11235678888999999998865432 33
Q ss_pred hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. ...++.|+.++|++.. +....++.+..++.|+.++.
T Consensus 94 ~------~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 94 I------KAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp H------HHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCEEEC
T ss_pred H------HHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCEEEE
Confidence 3 3456788999998764 33445677778888887764
No 164
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.77 E-value=8.2e-09 Score=90.25 Aligned_cols=111 Identities=19% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh-CCC---ccC--CCHHHHhhcCCeEEEEeCChhHH--
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS-LGA---KYQ--PSPDEVAASCDVTFAMLADPESA-- 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~-~g~---~~~--~~~~~~~~~aDivv~~~p~~~~~-- 141 (290)
+++++|||+|.+|++++..|...|. +|++++|++++.+.+.+ .+. ... +++.+.++++|+||.++|.....
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~ 220 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRV 220 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCC
Confidence 7899999999999999999999998 99999999988777665 222 111 24556678999999999875421
Q ss_pred HHH-hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 142 MDV-ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 142 ~~~-~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
... + . .+.++++.+++|++.. |..+ .+.+..++.|+.+++
T Consensus 221 ~~~~i--~---~~~l~~~~~v~D~~y~-P~~T-~ll~~A~~~G~~~v~ 261 (297)
T 2egg_A 221 EVQPL--S---LERLRPGVIVSDIIYN-PLET-KWLKEAKARGARVQN 261 (297)
T ss_dssp SCCSS--C---CTTCCTTCEEEECCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred CCCCC--C---HHHcCCCCEEEEcCCC-CCCC-HHHHHHHHCcCEEEC
Confidence 111 1 1 3457899999999885 4333 367777777877664
No 165
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.77 E-value=1.2e-08 Score=94.15 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=74.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
+++++|+|+|.||+.+|+.|+.+|.+|+++|+++.+.......+... .+++++++.+|+|+.+... .+++ +.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG~----~~vl--~~e 337 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTGN----KDII--MLD 337 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSSC----SCSB--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCCC----hhhh--hHH
Confidence 89999999999999999999999999999999987766666666654 4788999999999976533 2344 344
Q ss_pred ccccCCCCCEEEEecCCC
Q 022909 151 AASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 151 ~~~~~~~~~~lin~s~~~ 168 (290)
.++.|+++++++|+++..
T Consensus 338 ~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 338 HMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHTTSCTTEEEEESSSTT
T ss_pred HHHhcCCCeEEEEcCCCC
Confidence 578899999999998864
No 166
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.76 E-value=2.3e-08 Score=89.10 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=81.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
++||||||+|.||+.+++.+... +.++. ++|+++++.+.+.+ .++ ..+++++++++ +.|+|++++|.......+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 81 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV 81 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH
Confidence 47999999999999999999875 56765 78999888776655 565 36789999998 799999999876554443
Q ss_pred hcccccccccCCCCCEEE-Eec-CCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKGYV-DVS-TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~li-n~s-~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
. ..++.|..++ .-- .....+.+++.++.++.++.+.
T Consensus 82 ~-------~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~ 119 (344)
T 3ezy_A 82 I-------ACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILF 119 (344)
T ss_dssp H-------HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEE
T ss_pred H-------HHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 3 3345565444 322 4566677888888888776554
No 167
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.74 E-value=3.7e-08 Score=87.32 Aligned_cols=111 Identities=13% Similarity=0.184 Sum_probs=82.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
.++|||||+|.||+.+++.+... +.+|. ++|+++++.+.+.+ .++ ..+++++++++ +.|+|++++|.......+
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAA 84 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHH
Confidence 47999999999999999999885 56765 78999888777655 566 46789999998 789999999986655443
Q ss_pred hcccccccccCCCCCE-EEEec-CCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKG-YVDVS-TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~-lin~s-~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. ..++.|.. ++.-- .....+.+++.++.++.++.+..
T Consensus 85 ~-------~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 85 K-------LALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp H-------HHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred H-------HHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3 23444543 33322 44566777888888888776543
No 168
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.74 E-value=6e-08 Score=85.47 Aligned_cols=111 Identities=21% Similarity=0.273 Sum_probs=80.7
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|||||+|.||+. +++.+... ++++. ++|+++++.+.+.+ .|+..+++.+++..+.|+|++++|.......+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~- 83 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVS- 83 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHHH-
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHHH-
Confidence 479999999999996 88888763 67765 99999988776655 467677788877668999999999765544332
Q ss_pred ccccccccCCCCCE-EEEe-cCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKG-YVDV-STVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~-lin~-s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..++.|.. ++.- ......+.+++.++.++.++.+..
T Consensus 84 ------~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 84 ------TLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp ------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred ------HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 33556664 4442 244566777888888887766543
No 169
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.73 E-value=6.7e-08 Score=85.57 Aligned_cols=111 Identities=11% Similarity=0.168 Sum_probs=80.1
Q ss_pred CeEEEEcccHhHHHH-HHHHHHCCCeEE-EEeCCccchhhHHh-CCCc-cCCCHHHHhh--cCCeEEEEeCChhHHHHHh
Q 022909 72 GRIGFLGMGIMGTPM-AQNLLKAGCDVT-VWNRTKSKCDPLIS-LGAK-YQPSPDEVAA--SCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 72 ~~IgiiG~G~iG~~l-a~~l~~~g~~V~-~~d~~~~~~~~~~~-~g~~-~~~~~~~~~~--~aDivv~~~p~~~~~~~~~ 145 (290)
++|||||+|.||+.+ ++.+...++++. ++|+++++.+.+.+ .++. .+++++++++ +.|+|++++|.......+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 479999999999998 878877778765 88999888766554 5663 6778999987 4999999998755443332
Q ss_pred cccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcEEeC
Q 022909 146 CGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASFLEA 189 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~~~~ 189 (290)
..++.|+.++.- ......+.+++.+..++.++.+...
T Consensus 81 -------~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (332)
T 2glx_A 81 -------AAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN 119 (332)
T ss_dssp -------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred -------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 335567654432 2345666778888888877766543
No 170
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.73 E-value=6.2e-09 Score=88.83 Aligned_cols=108 Identities=17% Similarity=0.098 Sum_probs=77.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC-CCccCCCHHHHhhcCCeEEEEeCChhHH-HHHhcc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL-GAKYQPSPDEVAASCDVTFAMLADPESA-MDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~aDivv~~~p~~~~~-~~~~~~ 147 (290)
+ +++|||+|.+|++++..|...|. +|++++|++++.+.+.+. +....+++.+.++++|+||.++|....- ...+
T Consensus 109 ~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i-- 185 (253)
T 3u62_A 109 E-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV-- 185 (253)
T ss_dssp S-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC--
T ss_pred C-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC--
Confidence 7 99999999999999999999998 899999998877665542 2223456778889999999999853210 1111
Q ss_pred cccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCc-EEe
Q 022909 148 KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 188 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~-~~~ 188 (290)
. .+.++++.+++|+... .+ .+.+..++.|++ .++
T Consensus 186 ~---~~~l~~~~~V~Divy~---~T-~ll~~A~~~G~~~~~~ 220 (253)
T 3u62_A 186 S---DDSLKNLSLVYDVIYF---DT-PLVVKARKLGVKHIIK 220 (253)
T ss_dssp C---HHHHTTCSEEEECSSS---CC-HHHHHHHHHTCSEEEC
T ss_pred C---HHHhCcCCEEEEeeCC---Cc-HHHHHHHHCCCcEEEC
Confidence 1 2346789999999877 23 444555556666 544
No 171
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.73 E-value=8.7e-09 Score=91.11 Aligned_cols=108 Identities=16% Similarity=0.247 Sum_probs=79.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CC-CeEEEEeCCccchhhHHhC------CCccCCCHHHHhhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AG-CDVTVWNRTKSKCDPLISL------GAKYQPSPDEVAASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g-~~V~~~d~~~~~~~~~~~~------g~~~~~~~~~~~~~aDivv~~~p~~~~~~ 142 (290)
.++|+|||+|.+|+.+++.+.. .+ .+|.+|||++++.+.+.+. .+. ++++++++ ++|+|++++|...
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~--- 199 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK--- 199 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS---
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC---
Confidence 5899999999999999999986 33 5899999999888777652 234 67899999 9999999998643
Q ss_pred HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeC
Q 022909 143 DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 189 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~ 189 (290)
.++ . .+.+++|+++++++...+. ..++...+..+...|++.
T Consensus 200 pv~--~---~~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~ 240 (322)
T 1omo_A 200 PVV--K---AEWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDD 240 (322)
T ss_dssp CCB--C---GGGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESC
T ss_pred cee--c---HHHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECC
Confidence 333 1 2568999999999766554 334443444444466664
No 172
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.71 E-value=2.3e-08 Score=88.10 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=91.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|||||+|.||+.+++.+... +.++ .++|+++++.+.+.+. +..+++.+++++ ++|+|++++|.......+.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~- 87 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEITL- 87 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHHH-
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHHH-
Confidence 47999999999999999999885 5664 5899998776655444 556678999986 7999999998755443332
Q ss_pred ccccccccCCCCCEE-EEe-cCCChhHHHHHHHHHHHcCCcEEeCccCCCCccccCCceEEEecCCHHHHHHHHHHHHHh
Q 022909 147 GKHGAASGMGPGKGY-VDV-STVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIM 224 (290)
Q Consensus 147 ~~~~~~~~~~~~~~l-in~-s~~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~ 224 (290)
..++.|+.+ +.- ......+.+++.+..++.++.+........ ...++.++++++.+
T Consensus 88 ------~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~----------------~p~~~~~~~~i~~l 145 (315)
T 3c1a_A 88 ------AAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLF----------------NPAWEALKADLTSI 145 (315)
T ss_dssp ------HHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGG----------------CHHHHHHHHTHHHH
T ss_pred ------HHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhc----------------CHHHHHHHHHHHHc
Confidence 335566644 442 244566777888888887766543322111 13445666666677
Q ss_pred CCc
Q 022909 225 GKS 227 (290)
Q Consensus 225 G~~ 227 (290)
|..
T Consensus 146 G~i 148 (315)
T 3c1a_A 146 GPI 148 (315)
T ss_dssp CSE
T ss_pred CCe
Confidence 763
No 173
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.71 E-value=7.2e-08 Score=85.22 Aligned_cols=110 Identities=9% Similarity=0.157 Sum_probs=80.0
Q ss_pred CeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHh-hcCCeEEEEeCChhHHHHHhc
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVA-ASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~-~~aDivv~~~p~~~~~~~~~~ 146 (290)
++|||||+|.||+.+++.+... +.++ .++|+++++.+.+.+ .|. ..++++++++ .+.|+|++++|.......+.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~- 80 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAK- 80 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHH-
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHH-
Confidence 6899999999999999999876 4665 589999887776655 454 5667999999 78999999998755443332
Q ss_pred ccccccccCCCCCEE-EEe-cCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKGY-VDV-STVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~l-in~-s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..++.|+.+ +.- ......+.+++.++.++.++.+..
T Consensus 81 ------~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 81 ------AALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp ------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred ------HHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 335566644 432 244566777888888887766543
No 174
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.71 E-value=4.7e-08 Score=87.13 Aligned_cols=109 Identities=17% Similarity=0.254 Sum_probs=80.9
Q ss_pred CCeEEEEcccHhHHHHHHHHH-H-CCCeEE-EEeCCccchhhHHh-CC--CccCCCHHHHhhc--CCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLL-K-AGCDVT-VWNRTKSKCDPLIS-LG--AKYQPSPDEVAAS--CDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~-~-~g~~V~-~~d~~~~~~~~~~~-~g--~~~~~~~~~~~~~--aDivv~~~p~~~~~~ 142 (290)
+++|||||+|.||+.+++.+. . .+.++. ++|+++++.+.+.+ .| ...++++++++++ .|+|++++|......
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHES 81 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHH
Confidence 579999999999999999998 4 366755 88999888777655 56 5677899999986 899999998766544
Q ss_pred HHhcccccccccCCCCCEEEEe-c-CCChhHHHHHHHHHHHcCCcE
Q 022909 143 DVACGKHGAASGMGPGKGYVDV-S-TVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~-s-~~~~~~~~~l~~~l~~~~~~~ 186 (290)
.+. ..++.|..++-- - .....+.+++.+..++.+..+
T Consensus 82 ~~~-------~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 82 SVL-------KAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp HHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred HHH-------HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 433 334556554432 1 345667778888888877654
No 175
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.71 E-value=7.4e-09 Score=88.88 Aligned_cols=111 Identities=18% Similarity=0.096 Sum_probs=80.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHG 150 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~ 150 (290)
++++.|||+|.+|++++..|...|.+|++++|++++.+.+.+.++... +++++ .++|+||.++|........+ ..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l--~~~ 193 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPL--NKE 193 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSS--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCC--ChH
Confidence 689999999999999999999999999999999998887765454332 33443 38999999998643211112 111
Q ss_pred -ccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 151 -AASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 151 -~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+.+.++++.+++|+...+ .+ .+.+..++.|+..++
T Consensus 194 ~l~~~l~~~~~v~D~vY~P--~T-~ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 194 VLKGYFKEGKLAYDLAYGF--LT-PFLSLAKELKTPFQD 229 (269)
T ss_dssp HHHHHHHHCSEEEESCCSS--CC-HHHHHHHHTTCCEEC
T ss_pred HHHhhCCCCCEEEEeCCCC--ch-HHHHHHHHCcCEEEC
Confidence 122467889999998775 33 377777777776655
No 176
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.71 E-value=3.8e-08 Score=86.93 Aligned_cols=111 Identities=12% Similarity=0.092 Sum_probs=76.6
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHC-CCeEEEEeCCccchhhHHh-CCCcc-CCCHHHHh-hcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKA-GCDVTVWNRTKSKCDPLIS-LGAKY-QPSPDEVA-ASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~-g~~V~~~d~~~~~~~~~~~-~g~~~-~~~~~~~~-~~aDivv~~~p~~~~~~~~~ 145 (290)
+++|||||+|.||+ .+++.+... +.+|.++|+++++.+.+.+ .|+.. ..+..+++ .+.|+|++++|.......+.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 81 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA 81 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH
Confidence 47899999999998 599988764 6777799999988776655 56653 33445555 67999999998655443332
Q ss_pred cccccccccCCCCC-EEEEe-cCCChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~-~lin~-s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..++.|+ +++.- ......+.+++.+..++.++.+..
T Consensus 82 -------~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 82 -------FFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp -------HHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred -------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 2344565 44442 234566677888888887766543
No 177
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.70 E-value=1.1e-07 Score=74.78 Aligned_cols=93 Identities=16% Similarity=0.135 Sum_probs=64.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-hCCCccC----CCHHH---H-hhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-SLGAKYQ----PSPDE---V-AASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-~~g~~~~----~~~~~---~-~~~aDivv~~~p~~~~~ 141 (290)
+++|.|+|+|.+|+.+++.|...|++|+++++++++.+.+. +.|.... .+.+. + ++++|+|++++|.+...
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~ 98 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDSTN 98 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHHH
Confidence 68999999999999999999999999999999998877665 4454321 12222 2 56799999999876544
Q ss_pred HHHhcccccccccCCCCCEEEEecCC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
..+. .....+.+...++-..+.
T Consensus 99 ~~~~----~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 99 FFIS----MNARYMFNVENVIARVYD 120 (155)
T ss_dssp HHHH----HHHHHTSCCSEEEEECSS
T ss_pred HHHH----HHHHHHCCCCeEEEEECC
Confidence 4333 223334455555544443
No 178
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.70 E-value=5.9e-08 Score=86.43 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=79.4
Q ss_pred CCeEEEEcccHhHHHHHHHHH-H-CCCeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLL-K-AGCDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~-~-~g~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p~~~~~~~ 143 (290)
.++|||||+|.||+.+++.+. . .++++ .++|+++++.+.+.+ .|+ ..+++++++++ +.|+|++++|.......
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 87 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEM 87 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHH
Confidence 579999999999999999998 5 36774 588999888776655 466 56778999987 69999999987655443
Q ss_pred HhcccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHc-CCcEEe
Q 022909 144 VACGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKAT-GASFLE 188 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~-~~~~~~ 188 (290)
+. ..++.|+.++-- ......+.+++.++.++. ++.+..
T Consensus 88 ~~-------~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 88 TI-------YAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp HH-------HHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred HH-------HHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 33 335566654422 233455666788877776 666543
No 179
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.69 E-value=6e-08 Score=85.23 Aligned_cols=67 Identities=21% Similarity=0.336 Sum_probs=53.7
Q ss_pred CeEEEEcccHhHHHHHHHHHHCC--CeEEEEeCCccchhhHHh-C---------CCcc-CCCHHHHhhcCCeEEEEeCCh
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAG--CDVTVWNRTKSKCDPLIS-L---------GAKY-QPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g--~~V~~~d~~~~~~~~~~~-~---------g~~~-~~~~~~~~~~aDivv~~~p~~ 138 (290)
|||+|||+|.||..++..|...| ++|.++|+++++.+.+.. . .+.. ..+. +.++++|+|++++|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 68999999999999999999888 799999999877655432 1 1232 3566 6789999999999875
Q ss_pred h
Q 022909 139 E 139 (290)
Q Consensus 139 ~ 139 (290)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 5
No 180
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.67 E-value=8e-08 Score=85.25 Aligned_cols=110 Identities=17% Similarity=0.231 Sum_probs=80.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC---Ce-EEEEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG---CD-VTVWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g---~~-V~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p~~~~~~ 142 (290)
++||||||+|.||+.+++.+...+ ++ |.++|+++++.+.+++ .++ ..+++++++++ +.|+|++++|...+..
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 81 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKA 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 579999999999999999998654 34 4578999888777665 566 46789999998 5899999998866554
Q ss_pred HHhcccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcEE
Q 022909 143 DVACGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
... ..++.|+.++-- -.....+.+++.+..++.++.+.
T Consensus 82 ~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 121 (334)
T 3ohs_X 82 AVM-------LCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLM 121 (334)
T ss_dssp HHH-------HHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHH-------HHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 433 334556654432 14456677788888888776554
No 181
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.66 E-value=1.4e-07 Score=84.70 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=80.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh-CC----CccCCCHHHHhh--cCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-LG----AKYQPSPDEVAA--SCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~g----~~~~~~~~~~~~--~aDivv~~~p~~~~~ 141 (290)
.++|||||+|.||+.+++.+... ++++ .++|+++++.+.+.+ .+ ...+++++++++ +.|+|++++|.....
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 85 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV 85 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH
Confidence 58999999999999999999875 5665 588999887766654 45 355678999997 589999999875544
Q ss_pred HHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEEe
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..+ ...++.|+.++.-- .....+.+++.++.++.++.+..
T Consensus 86 ~~~-------~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~ 127 (362)
T 1ydw_A 86 EWA-------IKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMD 127 (362)
T ss_dssp HHH-------HHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEE
T ss_pred HHH-------HHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 333 23456677554322 34556667888888888776553
No 182
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.65 E-value=9.5e-08 Score=85.63 Aligned_cols=109 Identities=14% Similarity=0.227 Sum_probs=80.7
Q ss_pred CCeEEEEcccHhHHHHHHHHH-H-CCCeEE-EEeCCccchhhHHh-CC--CccCCCHHHHhhc--CCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLL-K-AGCDVT-VWNRTKSKCDPLIS-LG--AKYQPSPDEVAAS--CDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~-~-~g~~V~-~~d~~~~~~~~~~~-~g--~~~~~~~~~~~~~--aDivv~~~p~~~~~~ 142 (290)
.+||||||+|.||+..++.+. . .+.++. ++|+++++.+.+++ .| ...++++++++++ .|+|++++|......
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 102 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHAD 102 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 479999999999999999998 4 367765 89999988777665 45 5677899999984 899999998866554
Q ss_pred HHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcE
Q 022909 143 DVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~ 186 (290)
.+. ..++.|..++--- .....+.+++.++.++.+..+
T Consensus 103 ~~~-------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 103 VAV-------AALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp HHH-------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred HHH-------HHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 433 3345565544321 445667778888888877654
No 183
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.64 E-value=2.2e-07 Score=82.46 Aligned_cols=110 Identities=16% Similarity=0.267 Sum_probs=81.7
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHCCCeE-EEEeCCccchhhHHh-C-CCccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKAGCDV-TVWNRTKSKCDPLIS-L-GAKYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~g~~V-~~~d~~~~~~~~~~~-~-g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
.++|||||+|.+|. .++..+...+.+| .++|+++++.+.+++ . +...+++++++++ +.|+|++++|...+...+
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 83 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAELA 83 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHHH
Confidence 47999999999996 6777777678885 689999988877766 3 5677889999997 589999999976655444
Q ss_pred hcccccccccCCCCCE-EEEe-cCCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKG-YVDV-STVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~-lin~-s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+ ..++.|+. ++.- ......+.+++.+..++.+..+.
T Consensus 84 ~-------~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 84 L-------RTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp H-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred H-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3 34556664 4432 24456677788888888776554
No 184
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.62 E-value=1.9e-07 Score=82.72 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=79.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh-CCCc-cCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-LGAK-YQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~g~~-~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
.+||||||+|.||..+++.+... +.++ .++|+++++.+.+.+ .++. .+++++++++ +.|+|++++|.......+
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVA 84 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 47999999999999999998865 4555 488999988777665 4664 6789999998 789999999876554443
Q ss_pred hcccccccccCCCCCEEEE-ec-CCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVD-VS-TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin-~s-~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. ..++.|+.++- -- .....+.+++.++.++.++.+..
T Consensus 85 ~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 85 K-------AALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp H-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred H-------HHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3 33455655442 21 34566777888888888766543
No 185
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.62 E-value=6.3e-08 Score=85.13 Aligned_cols=106 Identities=15% Similarity=0.245 Sum_probs=77.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CC-CeEEEEeCCccchhhHHh-----CCC--ccCCCHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AG-CDVTVWNRTKSKCDPLIS-----LGA--KYQPSPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g-~~V~~~d~~~~~~~~~~~-----~g~--~~~~~~~~~~~~aDivv~~~p~~~~~ 141 (290)
.++|+|||+|.||+.+++.|.. ++ .+|.+|||+ +.+.+.+ .|+ ..+ +++++++++|+|+.|+|.+
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 5899999999999999999976 34 589999999 4444443 244 345 8999999999999999874
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcC-CcEEe
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG-ASFLE 188 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~-~~~~~ 188 (290)
..++ . .+++++|++++++++..+.. .++...+-.+. ..|+|
T Consensus 195 ~pvl--~---~~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 195 TPLF--A---GQALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVE 236 (313)
T ss_dssp SCSS--C---GGGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEES
T ss_pred Cccc--C---HHHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEEC
Confidence 2444 1 35689999999998776643 34443333333 35666
No 186
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.61 E-value=1e-07 Score=83.55 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=68.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHhCCCcc--CCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLISLGAKY--QPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~~g~~~--~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
..||||||+|+||+.+++.+... ++++. ++|+++++.+. .|+.+ .+++.+. .++|+|++|+|.......+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~~~-- 82 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVERTA-- 82 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHHHH--
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhHHHH--
Confidence 47999999999999999999874 67776 78999876543 45442 3344444 6899999999865554333
Q ss_pred ccccccccCCCCCEEEEecCC---ChhHHHHHHHHHHHcCCcE
Q 022909 147 GKHGAASGMGPGKGYVDVSTV---DGDTSKLINGHIKATGASF 186 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~---~~~~~~~l~~~l~~~~~~~ 186 (290)
...++.|..+++.... .....+++.++.++.+..+
T Consensus 83 -----~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~ 120 (304)
T 3bio_A 83 -----LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAA 120 (304)
T ss_dssp -----HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEE
T ss_pred -----HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEE
Confidence 2445678888876432 2344467777777777543
No 187
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.58 E-value=2.3e-07 Score=85.37 Aligned_cols=111 Identities=12% Similarity=0.131 Sum_probs=80.1
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHC-CCeE-EEEeCCccchhhHHh-CCCc-----cCCCHHHHhh--cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-LGAK-----YQPSPDEVAA--SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~g~~-----~~~~~~~~~~--~aDivv~~~p~~~ 139 (290)
.++|||||+|.||+ .+++.+... ++++ .++|+++++.+.+.+ .|+. .+++++++++ +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 57999999999997 899988765 5665 589999887766655 5654 4678999997 6899999998766
Q ss_pred HHHHHhcccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcEEe
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+...+. ..++.|+.++.- ......+.+++.++.++.++.+..
T Consensus 163 h~~~~~-------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 163 HAEFAI-------RAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp HHHHHH-------HHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHH-------HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 554443 335566644432 234556667888888887766543
No 188
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=98.58 E-value=2.5e-08 Score=90.93 Aligned_cols=97 Identities=18% Similarity=0.077 Sum_probs=66.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCe-EEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDV-TFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDi-vv~~~p~~~~~~~~~~~~ 148 (290)
+++|+|+|+|+||+.+|+++.. +|++|+.+++..... ....|+ +++++++.+|. .++ +|. +++++ + +
T Consensus 212 gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~--~~~~gv----dl~~L~~~~d~~~~l-~~l-~~t~~-i--~ 280 (419)
T 1gtm_A 212 GKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI--YNPDGL----NADEVLKWKNEHGSV-KDF-PGATN-I--T 280 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE--EEEEEE----CHHHHHHHHHHHSSS-TTC-TTSEE-E--C
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc--cCccCC----CHHHHHHHHHhcCEe-ecC-ccCee-e--C
Confidence 8999999999999999999999 999999885432211 111111 56666654432 112 455 34555 4 3
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHH
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIK 180 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~ 180 (290)
.+.+..|++ .++||++|+..+++++ .++|+
T Consensus 281 ~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~ 310 (419)
T 1gtm_A 281 NEELLELEV-DVLAPAAIEEVITKKN-ADNIK 310 (419)
T ss_dssp HHHHHHSCC-SEEEECSCSCCBCTTG-GGGCC
T ss_pred HHHHHhCCC-CEEEECCCcccCCHHH-HHHhc
Confidence 445667877 5999999999999887 45553
No 189
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.57 E-value=1.8e-07 Score=85.53 Aligned_cols=138 Identities=22% Similarity=0.338 Sum_probs=93.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh-C-C----------------------CccCCCHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-L-G----------------------AKYQPSPDEV 124 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~-g----------------------~~~~~~~~~~ 124 (290)
..||||||+|.||+.+++.+... +++| .++|+++++.+.+.+ . | ...+++.+++
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 47899999999999999988754 5564 588999887766543 1 3 3456799999
Q ss_pred hhc--CCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecC-CChhHHHHHHHHHHHcCCcEEeCccCCCCccccCC
Q 022909 125 AAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDG 201 (290)
Q Consensus 125 ~~~--aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~-~~~~~~~~l~~~l~~~~~~~~~~p~~~~~~~~~~~ 201 (290)
+++ .|+|++++|.+..-..+. ...++.|+.++...- .......+|.+..++.++.+.
T Consensus 103 L~d~dIDaVviaTp~p~~H~e~a------~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~-------------- 162 (446)
T 3upl_A 103 LSNPLIDVIIDATGIPEVGAETG------IAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYS-------------- 162 (446)
T ss_dssp HTCTTCCEEEECSCCHHHHHHHH------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE--------------
T ss_pred hcCCCCCEEEEcCCChHHHHHHH------HHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeee--------------
Confidence 974 899999998754323333 455778888774321 111233567777777665543
Q ss_pred ceEEEecCC-HHHHHHHHHHHHHhCCcEEEeC
Q 022909 202 QLIFLAAGD-KSLYNTVAPLLDIMGKSRFYLG 232 (290)
Q Consensus 202 ~~~~~~~~~-~~~~~~v~~ll~~~G~~~~~~~ 232 (290)
+..++ +.....+.++.+.+|+.++.++
T Consensus 163 ----~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 163 ----LGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ----ECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----ecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 22233 3455677788888899888775
No 190
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.57 E-value=1.9e-07 Score=83.81 Aligned_cols=109 Identities=7% Similarity=0.025 Sum_probs=78.6
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHhC--CCccCCCHHHHhhc--CCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLISL--GAKYQPSPDEVAAS--CDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~~--g~~~~~~~~~~~~~--aDivv~~~p~~~~~~~ 143 (290)
.++|||||+|.||+. +++.+... +.++. ++|+++++.+.+++. +...++++++++++ .|+|++++|.......
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 84 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEM 84 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 479999999999995 88988875 66765 889999888777663 45667899999985 4999999986555433
Q ss_pred HhcccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcE
Q 022909 144 VACGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~ 186 (290)
+. ..++.|+.++-- -.....+.+++.+..++.++.+
T Consensus 85 ~~-------~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 122 (359)
T 3m2t_A 85 GL-------LAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS 122 (359)
T ss_dssp HH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred HH-------HHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 32 334556554421 1345566778888888776654
No 191
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.57 E-value=2.4e-07 Score=71.41 Aligned_cols=70 Identities=17% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc----CCCHHHH----hhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY----QPSPDEV----AASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~~----~~~aDivv~~~p~~~~ 140 (290)
+++|.|+|+|.+|+.+++.|...|++|.++|+++++.+.+.+.+... ..+.+.+ ++++|+|++++|....
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 57899999999999999999999999999999998887777655432 1222222 3478999999885433
No 192
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.56 E-value=7.2e-07 Score=75.41 Aligned_cols=106 Identities=13% Similarity=0.131 Sum_probs=69.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++||+|+|+|+||+.+++.+...+.++. ++|++++. ..++..++++++++ ++|+||-.. .+..+...+
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft-~p~a~~~~~---- 71 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFS-NPNLLFPLL---- 71 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECS-CHHHHHHHH----
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeC-ChHHHHHHH----
Confidence 4899999999999999999998766655 57887652 35677788899988 999987554 345555544
Q ss_pred cccccCCCCCEEEEecCCChhHH-HHHHHHHHHcCCcEEeCccCC
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTS-KLINGHIKATGASFLEAPVSG 193 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~-~~l~~~l~~~~~~~~~~p~~~ 193 (290)
. ++.+..+|..+++-.... +.+.++.+ .+.++-+|+|.
T Consensus 72 ---~-l~~g~~vVigTTG~s~e~~~~l~~aa~--~~~v~~a~N~S 110 (243)
T 3qy9_A 72 ---D-EDFHLPLVVATTGEKEKLLNKLDELSQ--NMPVFFSANMS 110 (243)
T ss_dssp ---T-SCCCCCEEECCCSSHHHHHHHHHHHTT--TSEEEECSSCC
T ss_pred ---H-HhcCCceEeCCCCCCHHHHHHHHHHHh--cCCEEEECCcc
Confidence 2 666766665555543222 23333322 35556666653
No 193
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.56 E-value=1.3e-07 Score=72.81 Aligned_cols=68 Identities=13% Similarity=0.296 Sum_probs=52.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc----CCCHHH---H-hhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY----QPSPDE---V-AASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~---~-~~~aDivv~~~p~~ 138 (290)
+++|.|+|+|.+|+.+++.|...|++|.++|+++++.+.+.+.+... ..+.+. + +.++|+|+.+++.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 57899999999999999999999999999999987666554444321 122222 2 56799999999865
No 194
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.54 E-value=1.6e-07 Score=83.62 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=78.4
Q ss_pred CCeEEEEcccHhHHH-HHH-HHHH-CCCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhhc--CCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQ-NLLK-AGCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAAS--CDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~-~l~~-~g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~--aDivv~~~p~~~~~~~ 143 (290)
++||||||+|.||+. .+. .+.. .+++|. ++|+++++.+..++ .++..++++++++++ .|+|++++|...+...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 81 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEY 81 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHH
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHH
Confidence 579999999999996 555 3333 367766 88999877644444 367778899999986 8999999987665544
Q ss_pred HhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 144 VACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+. ..++.|+.++.-- .....+.+++.+..++.++.+.
T Consensus 82 ~~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 82 AK-------RALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp HH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HH-------HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 33 4456677666443 3456677788888888776654
No 195
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.52 E-value=1.5e-07 Score=83.15 Aligned_cols=67 Identities=21% Similarity=0.291 Sum_probs=51.5
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHh---C------CCcc-CCCHHHHhhcCCeEEEEeCChh
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLIS---L------GAKY-QPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~---~------g~~~-~~~~~~~~~~aDivv~~~p~~~ 139 (290)
|||+|||+|.||..++..|...|+ +|.++|+++++.+.... . .... .++ .+.++++|+|++++|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 589999999999999999999998 99999999876655331 1 1111 234 356789999999998643
No 196
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.52 E-value=3.2e-07 Score=82.68 Aligned_cols=195 Identities=13% Similarity=0.050 Sum_probs=114.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCc------cchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTK------SKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~------~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
+++|+|||+|.-|.+.|..|+..|.+|.+--|.. ++.+.+.+.|..+. +..|+++.+|+|.+.+|+.. ...+
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~-q~~v 114 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQ-HSDV 114 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGG-HHHH
T ss_pred CCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhh-HHHH
Confidence 8999999999999999999999999999887632 22344555777765 79999999999999998744 4455
Q ss_pred hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccCCCCcc-----ccCCceE-EEec----CCHHH
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVSGSKKP-----AEDGQLI-FLAA----GDKSL 213 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~~~~~~-----~~~~~~~-~~~~----~~~~~ 213 (290)
. +++.+.|++|+.+. .|.|--+.... .-...++.++- +|--.+... .+.+.++ +.+- .+..+
T Consensus 115 y---~~I~p~lk~G~~L~-faHGFnI~~~~---i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~a 187 (491)
T 3ulk_A 115 V---RTVQPLMKDGAALG-YSHGFNIVEVG---EQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEG 187 (491)
T ss_dssp H---HHHGGGSCTTCEEE-ESSCHHHHTTC---CCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSCH
T ss_pred H---HHHHhhCCCCCEEE-ecCcccccccc---cccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEEEEeCCCCchhH
Confidence 5 35889999999876 34544221100 00011233222 332221111 1233333 2331 22366
Q ss_pred HHHHHHHHHHhCCc---EEEeCCcchHHHHHHH-H-HHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHH
Q 022909 214 YNTVAPLLDIMGKS---RFYLGDVGNGAAMKLV-V-NMIMGRS-CTFSYSFLTLEFVDFLINTVTMFL 275 (290)
Q Consensus 214 ~~~v~~ll~~~G~~---~~~~~~~g~a~~~k~~-~-n~~~~~~-~~~~ea~~l~~~~G~~~~~~~~~i 275 (290)
.+.+..+...+|.. ++... .....-..+. . ..+...+ ..+...+....+.|.+|+.++...
T Consensus 188 ~~~AlayA~aiG~~raGvieTT-F~eEtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~ 254 (491)
T 3ulk_A 188 MAIAKAWAAATGGHRAGVLESS-FVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLI 254 (491)
T ss_dssp HHHHHHHHHHHTGGGTCEEECC-HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCceeecc-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 77777888888753 33222 1111111111 1 1122233 334444566788899997665443
No 197
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.52 E-value=1.1e-07 Score=86.59 Aligned_cols=91 Identities=23% Similarity=0.265 Sum_probs=67.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHH-hCCCcc--CCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLI-SLGAKY--QPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~-~~g~~~--~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
+++|+|||+|.||+.+++.+..+|+ +|+++||++++.+.+. +.|... .+++++++.++|+|+.++|.+... +
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~---~- 242 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPV---I- 242 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCC---B-
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCce---e-
Confidence 7999999999999999999999999 8999999987764443 345432 246778888999999999865432 1
Q ss_pred cccccccc--C----CCCCEEEEecC
Q 022909 147 GKHGAASG--M----GPGKGYVDVST 166 (290)
Q Consensus 147 ~~~~~~~~--~----~~~~~lin~s~ 166 (290)
+++.++. | .++.++||++.
T Consensus 243 -~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 243 -HVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp -CHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred -cHHHHHHHHHhccCCCCEEEEEccC
Confidence 1122332 2 35567888864
No 198
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.51 E-value=4.2e-07 Score=81.23 Aligned_cols=109 Identities=17% Similarity=0.182 Sum_probs=77.9
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHhCCCccCCCHHHHhhc--CCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAAS--CDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~--aDivv~~~p~~~~~~~~~ 145 (290)
..+|||||+|.||+. .+..+... +.+|. ++|+++++.+. ...+...++++++++++ .|+|++++|...+...+.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~ 85 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQ 85 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHH
Confidence 579999999999997 78888765 66764 88998876541 11356677899999986 899999999866654443
Q ss_pred cccccccccCCCCCEEEEe-c-CCChhHHHHHHHHHHHcCCcEE
Q 022909 146 CGKHGAASGMGPGKGYVDV-S-TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~-s-~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
..++.|+.++-- - .....+.+++.++.++.++.+.
T Consensus 86 -------~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 86 -------SALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp -------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred -------HHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 345566654422 1 3456677788888888776553
No 199
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.51 E-value=4.3e-07 Score=81.53 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=78.5
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~ 145 (290)
..+|||||+|.||+. .+..+... +++|. ++|+++++... ...+...+++++++++ +.|+|++++|.......+.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~ 85 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLAR 85 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHH
Confidence 478999999999997 77777765 67764 88998865431 1235677789999998 6899999998766554433
Q ss_pred cccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 146 CGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
..++.|+.++.-- .....+.+++.++.++.++.+.
T Consensus 86 -------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 86 -------LALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp -------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred -------HHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 3455666665433 3456677788888888776653
No 200
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.49 E-value=8.3e-08 Score=86.19 Aligned_cols=94 Identities=22% Similarity=0.308 Sum_probs=70.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-------CCHHHHhhcCCeEEEEeCChhH-HH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAASCDVTFAMLADPES-AM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~~aDivv~~~p~~~~-~~ 142 (290)
+++|.|+|+|.+|+.+++.++..|.+|+++||++++.+.+.+.+.... .++.+.++++|+||.+++.+.. ..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~ 246 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAP 246 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCC
Confidence 689999999999999999999999999999999988777655322111 2345667789999999875431 11
Q ss_pred HHhcccccccccCCCCCEEEEecC
Q 022909 143 DVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.++ .++.++.|+++.+++|++.
T Consensus 247 ~li--~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 247 ILV--PASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCB--CHHHHTTSCTTCEEEETTC
T ss_pred eec--CHHHHhhCCCCCEEEEEec
Confidence 222 1234677899999999974
No 201
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.49 E-value=3.1e-07 Score=83.78 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=78.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC---------CCeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA---------GCDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~---------g~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p 136 (290)
+.||||||+|.||+..++.++.. +.+| .++|+++++.+.+++ .++ ..+++++++++ +.|+|++++|
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC
Confidence 57899999999999999888764 3454 478999988877665 565 46789999997 4799999998
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcE
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~ 186 (290)
........+ ..++.|+.++--= .....+.++|.++.++.+..+
T Consensus 106 ~~~H~~~~~-------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 150 (412)
T 4gqa_A 106 NHLHYTMAM-------AAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKT 150 (412)
T ss_dssp GGGHHHHHH-------HHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred cHHHHHHHH-------HHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCee
Confidence 766554443 3455666554321 345566678888877776654
No 202
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.49 E-value=4.7e-07 Score=80.16 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=52.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHH----h--------CCCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLI----S--------LGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~----~--------~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
.+||+|||+|.||..+|..++..|+ +|.+||+++++.+... + ..+..+++. +.++++|+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 4799999999999999999999998 9999999987665321 1 013344567 67899999999984
No 203
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.48 E-value=1.7e-07 Score=72.56 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=76.1
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHCCCeEEEEeCCccc-hhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKAGCDVTVWNRTKSK-CDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~g~~V~~~d~~~~~-~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~ 145 (290)
.++|+|||+ |++|..+++.|...|++ +|+.++++ .+++ .|...+.+++|+-+..|++++++|. +.+..++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~ 87 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPP-SALMDHL 87 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH
Confidence 689999999 89999999999999997 56666653 1222 4677778899988889999999986 5666665
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+. ..+.++++. ... ++++.+.+++.|++++.
T Consensus 88 ---~~~~~~-gi~~i~~~~-g~~---~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 88 ---PEVLAL-RPGLVWLQS-GIR---HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp ---HHHHHH-CCSCEEECT-TCC---CHHHHHHHHHTTCCEEE
T ss_pred ---HHHHHc-CCCEEEEcC-CcC---HHHHHHHHHHcCCEEEc
Confidence 222332 233555543 222 57888888889999886
No 204
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.48 E-value=1.3e-07 Score=81.87 Aligned_cols=110 Identities=19% Similarity=0.188 Sum_probs=78.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC-C----CccCCCHHHHhhcCCeEEEEeCChhHHHH-
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL-G----AKYQPSPDEVAASCDVTFAMLADPESAMD- 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~-g----~~~~~~~~~~~~~aDivv~~~p~~~~~~~- 143 (290)
++++.|+|+|.+|++++..|...|. +|.+++|++++.+.+.+. + +. ..+++++.+++|+||.++|.......
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~-~~~~~~l~~~aDiIInaTp~gm~~~~~ 204 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVK-AQAFEQLKQSYDVIINSTSASLDGELP 204 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEE-EEEGGGCCSCEEEEEECSCCCC----C
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCee-EeeHHHhcCCCCEEEEcCcCCCCCCCC
Confidence 7899999999999999999999996 999999999887766542 1 22 22455655789999999997543221
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCc-EEe
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 188 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~-~~~ 188 (290)
.+ . .+.++++.+++|+...+. .+. +.+..++.|+. .++
T Consensus 205 ~l--~---~~~l~~~~~V~DlvY~P~-~T~-ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 205 AI--D---PVIFSSRSVCYDMMYGKG-YTV-FNQWARQHGCAQAID 243 (281)
T ss_dssp SC--C---GGGEEEEEEEEESCCCSS-CCH-HHHHHHHTTCSEEEC
T ss_pred CC--C---HHHhCcCCEEEEecCCCc-cCH-HHHHHHHCCCCEEEC
Confidence 12 1 245678899999987643 333 55667777765 544
No 205
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.47 E-value=3.2e-07 Score=81.35 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=52.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh--------C----CCccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS--------L----GAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~--------~----g~~~~~~~~~~~~~aDivv~~~ 135 (290)
.+||+|||+|.+|..+|..|+..|+ +|.+||+++++.+.... . .+..++++++.++++|+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 4799999999999999999999898 99999999876654111 1 1233478887899999999998
No 206
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.46 E-value=8.2e-07 Score=81.22 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=80.4
Q ss_pred CCeEEEEcccH---hHHHHHHHHHHCC-CeEE--EEeCCccchhhHHh-CCC---ccCCCHHHHhhc-------CCeEEE
Q 022909 71 PGRIGFLGMGI---MGTPMAQNLLKAG-CDVT--VWNRTKSKCDPLIS-LGA---KYQPSPDEVAAS-------CDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~G~---iG~~la~~l~~~g-~~V~--~~d~~~~~~~~~~~-~g~---~~~~~~~~~~~~-------aDivv~ 133 (290)
..||||||+|. ||...+..+...+ +++. ++|+++++.+.+++ .|+ ..++++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 46999999999 9999999887765 5664 67999988777655 576 577899999986 899999
Q ss_pred EeCChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 134 ~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
++|.......+. ..++.|+.++--= .....+.+++.+..++.++.+.
T Consensus 117 ~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 165 (417)
T 3v5n_A 117 VTPNHVHYAAAK-------EFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFV 165 (417)
T ss_dssp CSCTTSHHHHHH-------HHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEE
T ss_pred CCCcHHHHHHHH-------HHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 999866544433 3456676654321 3456677788888888776543
No 207
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.46 E-value=7.8e-07 Score=79.78 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=77.9
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHCCCeE-EEEeCCccchhhHHh-CC-CccCCCHHHHhhc--CCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKAGCDV-TVWNRTKSKCDPLIS-LG-AKYQPSPDEVAAS--CDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~g~~V-~~~d~~~~~~~~~~~-~g-~~~~~~~~~~~~~--aDivv~~~p~~~~~~~~ 144 (290)
..+|||||+|.+|. .++..+...+.++ .++|+++++.+.+++ .+ ...++++++++++ .|+|++++|.......+
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~ 105 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAELA 105 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 57999999999995 5677777778885 588999988777665 44 5667899999986 89999999876554333
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcE
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~ 186 (290)
. ..++.|+.++--= .....+.+++.++.++.++.+
T Consensus 106 ~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 106 I-------RAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp H-------HHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred H-------HHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 2 3455566544321 344566777888877766544
No 208
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.45 E-value=6.8e-07 Score=78.49 Aligned_cols=66 Identities=14% Similarity=0.145 Sum_probs=51.9
Q ss_pred CeEEEEcccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHh---C-------C--CccCCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLIS---L-------G--AKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~---~-------g--~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
|||+|||+|.||..++..|+.. |++|.++|+++++.+.... . . +..+++.++ ++++|+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 5899999999999999999874 7899999999876654321 1 1 233356766 8999999999976
Q ss_pred h
Q 022909 138 P 138 (290)
Q Consensus 138 ~ 138 (290)
+
T Consensus 80 p 80 (310)
T 1guz_A 80 P 80 (310)
T ss_dssp C
T ss_pred C
Confidence 4
No 209
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.45 E-value=7e-07 Score=79.38 Aligned_cols=110 Identities=16% Similarity=0.145 Sum_probs=79.8
Q ss_pred CCeEEEEccc-HhHHHHHHHHHHC--CCeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHhh--cCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMG-IMGTPMAQNLLKA--GCDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAA--SCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G-~iG~~la~~l~~~--g~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~--~aDivv~~~p~~~~~~ 142 (290)
..+|||||+| .+|...+..+... +.++ .++|+++++.+.+++ .++ ..+++++++++ +.|+|++++|......
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 97 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLP 97 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHHHH
Confidence 5789999999 8999999999876 4565 588999988777655 465 66789999997 5899999998765543
Q ss_pred HHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 143 DVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
... ..++.|+.++--- .....+.+++.++.++.+..+.
T Consensus 98 ~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 98 FIE-------KALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp HHH-------HHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred HHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 332 3455566554322 2355666788888887776543
No 210
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.45 E-value=7.4e-07 Score=80.65 Aligned_cols=111 Identities=13% Similarity=0.160 Sum_probs=81.6
Q ss_pred CCeEEEEccc-HhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhhc--CCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMG-IMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAAS--CDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G-~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~--aDivv~~~p~~~~~~~~ 144 (290)
.+||||||+| .+|..++..+... +.++. ++|+++++.+.+++ .|+..+.++++++++ .|+|++++|...+...+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~ 81 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHV 81 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHH
Confidence 5799999999 9999999999875 55654 88999887766654 578888899999985 89999999876554433
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. ..++.|+.++--- .....+.+++.+..++.++.+.-
T Consensus 82 ~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 120 (387)
T 3moi_A 82 V-------QASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVV 120 (387)
T ss_dssp H-------HHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred H-------HHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEE
Confidence 3 3345565554321 34566777888888887766543
No 211
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.44 E-value=7.4e-07 Score=79.42 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=77.6
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHh-CCC-ccCCCHHHHhhc--CCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGA-KYQPSPDEVAAS--CDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~~--aDivv~~~p~~~~~~~ 143 (290)
+.||||||+|.||+. ++..+... +.+|. ++|+++++.+.+++ .|+ ..++++++++++ .|+|++++|.......
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~ 102 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEW 102 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHHHH
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHH
Confidence 479999999999986 56777665 56765 78999988877765 566 467899999964 7999999997665544
Q ss_pred HhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 144 VACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
.+ ..++.|+.++--= .....+.+++.++.++.++.+.
T Consensus 103 ~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~ 141 (350)
T 4had_A 103 SI-------KAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVT 141 (350)
T ss_dssp HH-------HHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEE
T ss_pred HH-------HHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCcee
Confidence 33 3344555443211 2345567788888887776543
No 212
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.43 E-value=8.2e-07 Score=80.69 Aligned_cols=110 Identities=9% Similarity=0.028 Sum_probs=81.5
Q ss_pred CCeEEEEcccH---hHHHHHHHHHHCC-CeEE--EEeCCccchhhHHh-CCC---ccCCCHHHHhhc-------CCeEEE
Q 022909 71 PGRIGFLGMGI---MGTPMAQNLLKAG-CDVT--VWNRTKSKCDPLIS-LGA---KYQPSPDEVAAS-------CDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~G~---iG~~la~~l~~~g-~~V~--~~d~~~~~~~~~~~-~g~---~~~~~~~~~~~~-------aDivv~ 133 (290)
..+|||||+|. ||+..+..+...+ +++. ++|+++++.+.+++ .|+ ..++++++++++ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 47899999999 9999999887765 6765 57999988777655 677 578899999975 899999
Q ss_pred EeCChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 134 MLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 134 ~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
++|...+...+. ..++.|+.++--= .....+.+++.++.++.++.+.
T Consensus 92 ~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 140 (398)
T 3dty_A 92 ATPNGTHYSITK-------AALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVG 140 (398)
T ss_dssp ESCGGGHHHHHH-------HHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcHHHHHHHH-------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 999866554433 3344566554321 3456677888888888776553
No 213
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.43 E-value=5.3e-07 Score=79.56 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=70.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
.+||+|||+|+||+.+++.+... ++++ .++|+++++ .+. .++..++++++++.++|+|++++|.......+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~--- 76 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIPEQA--- 76 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHH---
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHH---
Confidence 47899999999999999999876 5664 588998655 222 455556778888888999999998765544433
Q ss_pred ccccccCCCCCEEEEecCCC--hhHH-HHHHHHHHHcC
Q 022909 149 HGAASGMGPGKGYVDVSTVD--GDTS-KLINGHIKATG 183 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~--~~~~-~~l~~~l~~~~ 183 (290)
..++.|..++...... .... +++.++.++++
T Consensus 77 ----~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 77 ----PKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp ----HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred ----HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 3456677776554433 2233 45666666544
No 214
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.42 E-value=7.8e-07 Score=78.51 Aligned_cols=65 Identities=18% Similarity=0.231 Sum_probs=51.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh---C-------C--CccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS---L-------G--AKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~---~-------g--~~~~~~~~~~~~~aDivv~~~p 136 (290)
.+||+|||+|.||..++..++..|+ +|.++|+++++.+.... . . +..+.+. +.+++||+||++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 5799999999999999999999998 99999999876543211 1 1 2333567 77899999999983
No 215
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.42 E-value=1e-06 Score=81.15 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=78.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh----CC---CccCC----CHHHHhh--cCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS----LG---AKYQP----SPDEVAA--SCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~----~g---~~~~~----~~~~~~~--~aDivv~~~ 135 (290)
.++|||||+|.||+..++.+... +.+| .++|+++++.+.+++ .| ...++ +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 57999999999999999998875 5665 588999888776543 34 45566 8999997 489999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEe--cCCChhHHHHHHHHHHHcCCcEE
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDV--STVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~--s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
|...+...++ ..++.|+.++-- -.....+.+++.++.++.+..+.
T Consensus 100 p~~~h~~~~~-------~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 100 PWEWHHEHGV-------AAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp CGGGHHHHHH-------HHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CcHHHHHHHH-------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 9765544433 345566655432 13455666788888877776543
No 216
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.42 E-value=2.1e-07 Score=83.58 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=74.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC------CccCCCHHHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG------AKYQPSPDEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g------~~~~~~~~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
.|||+|+|+|.+|+.+++.|.. .++|.++|++.++.+.+.+.. +.-.+++.++++++|+|+.++|.... ..+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~-~~v 93 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG-FKS 93 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH-HHH
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc-chH
Confidence 5899999999999999999965 589999999988776655421 11123456778899999999986532 233
Q ss_pred hcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. ...++.|..++|+|- ......++.+..++.++.++.
T Consensus 94 ~------~~~~~~g~~yvD~s~-~~~~~~~l~~~a~~~g~~~i~ 130 (365)
T 3abi_A 94 I------KAAIKSKVDMVDVSF-MPENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp H------HHHHHHTCEEEECCC-CSSCGGGGHHHHHHTTCEEEC
T ss_pred H------HHHHhcCcceEeeec-cchhhhhhhhhhccCCceeee
Confidence 3 234556777888753 233445566666666665543
No 217
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.42 E-value=1.2e-06 Score=78.88 Aligned_cols=109 Identities=16% Similarity=0.107 Sum_probs=75.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--------CCeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHhhc--CCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--------GCDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAAS--CDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--------g~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~~--aDivv~~~p~ 137 (290)
+-||||||+|.||+..++.+... +.+| .++|+++++.+.+++ .++ ..++++++++++ .|+|++++|.
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 35899999999999888776442 4554 588999998887765 565 467899999974 7999999998
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcE
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~ 186 (290)
..+....+ ..++.|+.++--= .....+.+++.++.++.+..+
T Consensus 105 ~~H~~~a~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 148 (393)
T 4fb5_A 105 QFHAEMAI-------AALEAGKHVWCEKPMAPAYADAERMLATAERSGKVA 148 (393)
T ss_dssp GGHHHHHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCE
T ss_pred HHHHHHHH-------HHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcc
Confidence 66655443 3344555544221 344556677888887776654
No 218
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.42 E-value=6.8e-07 Score=69.48 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=74.4
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+ |++|..+++.|...|++| |+.+++. +.+ .|...+.+++|+....|++++++|. +....++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v--~~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv- 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDV--YPVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV- 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEE--EEECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEE--EEECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-
Confidence 588999999 799999999999999985 4545543 222 4677778899988889999999986 5556666
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+. ..+.+++. +.. ..+++.+.+++.|++++.
T Consensus 95 --~~~~~~-gi~~i~~~-~g~---~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 95 --EQAIKK-GAKVVWFQ-YNT---YNREASKKADEAGLIIVA 129 (144)
T ss_dssp --HHHHHH-TCSEEEEC-TTC---CCHHHHHHHHHTTCEEEE
T ss_pred --HHHHHc-CCCEEEEC-CCc---hHHHHHHHHHHcCCEEEc
Confidence 222322 22344443 222 267888889999999885
No 219
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.41 E-value=2.9e-07 Score=82.85 Aligned_cols=110 Identities=12% Similarity=0.264 Sum_probs=76.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEE-EEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHH---HH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVT-VWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESA---MD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~-~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~---~~ 143 (290)
+.||+|||+| +|+..++.+... ++++. ++|+++++.+.+++ +|+..++++++++++.|++++++|..... ..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~ 85 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQ 85 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHHH
Confidence 5899999999 799888887764 46654 88999988877665 78888899999999999999999875431 11
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+. ...++.|+.++--=-....+.+++.+..+++|+.+.
T Consensus 86 ~a------~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 86 LA------RHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp HH------HHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HH------HHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEE
Confidence 11 223444554433222345566777787777776654
No 220
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.39 E-value=1.1e-06 Score=78.84 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=77.0
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHhC-CCccCCCHHHHhhc--CCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLISL-GAKYQPSPDEVAAS--CDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~--aDivv~~~p~~~~~~~~ 144 (290)
+.||||||+|.||+. .+..+... +.+|. ++|+++++.. ++. +...++++++++++ .|+|++++|........
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYA 82 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 479999999999997 77777765 67764 8899877632 233 56777899999987 89999999976655443
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
. ..++.|+.++--- .....+.+++.++.++.++.+.
T Consensus 83 ~-------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (362)
T 3fhl_A 83 G-------MALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLS 120 (362)
T ss_dssp H-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred H-------HHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3 3455566554321 3456677788888888776553
No 221
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.39 E-value=9.4e-07 Score=78.83 Aligned_cols=108 Identities=9% Similarity=0.129 Sum_probs=75.4
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHC-CCeEE-EEeCCccchhhHHh----CCCccCCCHHHHhhc--CCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKA-GCDVT-VWNRTKSKCDPLIS----LGAKYQPSPDEVAAS--CDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~-g~~V~-~~d~~~~~~~~~~~----~g~~~~~~~~~~~~~--aDivv~~~p~~~~~ 141 (290)
++||||||+|.||+ ..+..+... +++|. ++|++ +.+.+++ .++..++++++++++ .|+|++++|...+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 57999999999998 577767654 56764 78887 3344433 466778899999986 89999999886654
Q ss_pred HHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
..+. ..++.|+.++--= .....+.+++.++.++.++.+.
T Consensus 80 ~~~~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (349)
T 3i23_A 80 DLAK-------QAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVM 120 (349)
T ss_dssp HHHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHH-------HHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 4433 3345666554321 3445667788888888776654
No 222
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.38 E-value=8.3e-07 Score=76.37 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=77.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC-C---CccCCCHHHHh-hcCCeEEEEeCChhHHH-H
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL-G---AKYQPSPDEVA-ASCDVTFAMLADPESAM-D 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~-g---~~~~~~~~~~~-~~aDivv~~~p~~~~~~-~ 143 (290)
++++.|+|+|.+|++++..|...|. +|++++|++++.+.+.+. + +.. .+++++- .++|+||.++|....-. .
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~-~~~~~l~~~~~DivInaTp~gm~~~~~ 198 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI-SRYEALEGQSFDIVVNATSASLTADLP 198 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE-ECSGGGTTCCCSEEEECSSGGGGTCCC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE-eeHHHhcccCCCEEEECCCCCCCCCCC
Confidence 7999999999999999999999996 999999999887776552 1 121 2344433 68999999998654211 0
Q ss_pred HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCc-EEe
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 188 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~-~~~ 188 (290)
.+ . .+.++++.+++|+...+.. + .+.+..++.|+. .++
T Consensus 199 ~i--~---~~~l~~~~~V~DlvY~P~~-T-~ll~~A~~~G~~~~~~ 237 (272)
T 3pwz_A 199 PL--P---ADVLGEAALAYELAYGKGL-T-PFLRLAREQGQARLAD 237 (272)
T ss_dssp CC--C---GGGGTTCSEEEESSCSCCS-C-HHHHHHHHHSCCEEEC
T ss_pred CC--C---HHHhCcCCEEEEeecCCCC-C-HHHHHHHHCCCCEEEC
Confidence 11 1 2457889999999766433 3 355666777765 444
No 223
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.37 E-value=1.4e-06 Score=76.40 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=51.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh---C-------C--CccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS---L-------G--AKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~---~-------g--~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
.+||+|||+|.||..++..++..|+ +|.++|+++++.+.... . . +..+++. +.++++|+||++.+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 4799999999999999999999997 99999998866543211 1 1 2233566 678999999999854
Q ss_pred h
Q 022909 138 P 138 (290)
Q Consensus 138 ~ 138 (290)
+
T Consensus 81 p 81 (309)
T 1ur5_A 81 P 81 (309)
T ss_dssp -
T ss_pred C
Confidence 4
No 224
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.35 E-value=1.6e-06 Score=74.58 Aligned_cols=108 Identities=25% Similarity=0.256 Sum_probs=74.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-CC---ccCCCHHHHh-hcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-GA---KYQPSPDEVA-ASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g~---~~~~~~~~~~-~~aDivv~~~p~~~~~~~~~ 145 (290)
++++.|+|+|.+|++++..|...|.+|++++|++++.+.+.+. +. ....+.+++. .++|+||.++|.... ..+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~-~~~- 196 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS-GDI- 196 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-TCC-
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-CCC-
Confidence 6899999999999999999999999999999998877666542 11 1112334443 489999999987543 111
Q ss_pred cccccc-cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCc
Q 022909 146 CGKHGA-ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 185 (290)
Q Consensus 146 ~~~~~~-~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~ 185 (290)
..+ .+.++++.+++|+...+.. + .+.+..++.|..
T Consensus 197 ---~~i~~~~l~~~~~v~D~~y~p~~-t-~~~~~a~~~G~~ 232 (271)
T 1nyt_A 197 ---PAIPSSLIHPGIYCYDMFYQKGK-T-PFLAWCEQRGSK 232 (271)
T ss_dssp ---CCCCGGGCCTTCEEEESCCCSSC-C-HHHHHHHHTTCC
T ss_pred ---CCCCHHHcCCCCEEEEeccCCcC-C-HHHHHHHHcCCC
Confidence 001 2346789999999876433 2 345566666655
No 225
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.35 E-value=1.3e-06 Score=75.59 Aligned_cols=111 Identities=17% Similarity=0.131 Sum_probs=79.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC------C--CccC--CCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL------G--AKYQ--PSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~------g--~~~~--~~~~~~~~~aDivv~~~p~~~ 139 (290)
++++.|+|+|.+|++++..|...|. +|++++|++++.+.+++. + +... +++++.++++|+||.++|...
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm 206 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGM 206 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCC
Confidence 7899999999999999999999998 799999999887765431 1 1122 377888899999999998532
Q ss_pred HHHH--HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 140 SAMD--VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 140 ~~~~--~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
.-.. .+ ..+.++++.+++|+.-.+.. + .+.+..++.|...++
T Consensus 207 ~~~~~~pi-----~~~~l~~~~~v~DlvY~P~~-T-~ll~~A~~~G~~~~~ 250 (283)
T 3jyo_A 207 PAHPGTAF-----DVSCLTKDHWVGDVVYMPIE-T-ELLKAARALGCETLD 250 (283)
T ss_dssp TTSCSCSS-----CGGGCCTTCEEEECCCSSSS-C-HHHHHHHHHTCCEEC
T ss_pred CCCCCCCC-----CHHHhCCCCEEEEecCCCCC-C-HHHHHHHHCcCeEeC
Confidence 1110 11 13457889999999655433 2 455555666766554
No 226
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.35 E-value=7.5e-07 Score=77.99 Aligned_cols=66 Identities=15% Similarity=0.282 Sum_probs=48.1
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHh---CC------CccC-CCHHHHhhcCCeEEEEeCCh
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLIS---LG------AKYQ-PSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~---~g------~~~~-~~~~~~~~~aDivv~~~p~~ 138 (290)
|||+|||+|.+|..++..++..|+ +|.++|+++++.+.... .. .... ++ .+.++++|+|+++++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCC
Confidence 589999999999999999999998 99999999865443211 11 1111 34 35688999999999644
No 227
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.35 E-value=1.4e-06 Score=77.92 Aligned_cols=108 Identities=12% Similarity=0.171 Sum_probs=76.8
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHC-CCeEE-EEeCCccchhhHHhC-CCccCCCHHHHhh--cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKA-GCDVT-VWNRTKSKCDPLISL-GAKYQPSPDEVAA--SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~-g~~V~-~~d~~~~~~~~~~~~-g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~ 144 (290)
..+|||||+|.||+. .+..+... +++|. ++|+++++. .++. +...+++++++++ +.|+|++++|...+...+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~--~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEV--KRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT 82 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHH--HHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH--HhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 479999999999997 77777665 66764 789987652 2233 5677789999998 689999999986665444
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
. ..++.|+.++--- .....+.+++.++.++.++.+.
T Consensus 83 ~-------~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 83 M-------ACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp H-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred H-------HHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 3 3455666555322 3456677788888888776543
No 228
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.34 E-value=1.2e-06 Score=81.42 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=79.2
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHC--CCeE-EEEeCCccchhhHHh-CCCc---cCCCHHHHhh--cCCeEEEEeCC
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKA--GCDV-TVWNRTKSKCDPLIS-LGAK---YQPSPDEVAA--SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~--g~~V-~~~d~~~~~~~~~~~-~g~~---~~~~~~~~~~--~aDivv~~~p~ 137 (290)
..+|||||+ |.||...++.+... +.+| .++|+++++.+.+++ .|+. .+++++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 479999999 99999999999886 6675 588999888776655 5654 6789999996 58999999987
Q ss_pred hhHHHHHhcccccccccCCCC------C-EEEEe-cCCChhHHHHHHHHHHHcC-CcE
Q 022909 138 PESAMDVACGKHGAASGMGPG------K-GYVDV-STVDGDTSKLINGHIKATG-ASF 186 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~------~-~lin~-s~~~~~~~~~l~~~l~~~~-~~~ 186 (290)
......++ ..++.| + +++.- -.....+.+++.++.++.+ +.+
T Consensus 119 ~~H~~~~~-------~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 169 (479)
T 2nvw_A 119 PEHYEVVK-------NILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQT 169 (479)
T ss_dssp HHHHHHHH-------HHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEE
T ss_pred HHHHHHHH-------HHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 65544433 234445 4 45543 2345666778888887776 544
No 229
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.34 E-value=1.3e-05 Score=69.54 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=74.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~~ 147 (290)
..||+|+|+ |++|+.+++.+...|+++ ++..+|.+... ...|+..+.+++++.+ ..|++++++|... ...++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~-V~~V~p~~~g~-~~~G~~vy~sl~el~~~~~~D~viI~tP~~~-~~~~~-- 81 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKM-VGGVTPGKGGT-THLGLPVFNTVREAVAATGATASVIYVPAPF-CKDSI-- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEE-EEEECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCGGG-HHHHH--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeE-EEEeCCCcccc-eeCCeeccCCHHHHhhcCCCCEEEEecCHHH-HHHHH--
Confidence 588999998 999999999999889883 34444432210 1356777889999988 8999999998754 44444
Q ss_pred cccccccCCCCC-EEEEecCC-ChhHHHHHHHHHHHcCCcEEe
Q 022909 148 KHGAASGMGPGK-GYVDVSTV-DGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 148 ~~~~~~~~~~~~-~lin~s~~-~~~~~~~l~~~l~~~~~~~~~ 188 (290)
.+.++.|. .+|..+.+ ...+.+++.+..++.+++++.
T Consensus 82 ----~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 82 ----LEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp ----HHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred ----HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 12222332 33445544 344566888888888887764
No 230
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.33 E-value=8.2e-07 Score=81.72 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=78.7
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHC--CCeE-EEEeCCccchhhHHh-CCCc---cCCCHHHHhh--cCCeEEEEeCC
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKA--GCDV-TVWNRTKSKCDPLIS-LGAK---YQPSPDEVAA--SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~--g~~V-~~~d~~~~~~~~~~~-~g~~---~~~~~~~~~~--~aDivv~~~p~ 137 (290)
..+|||||+ |.||..+++.+... +++| .++|+++++.+.+++ .|+. .+.+++++++ +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 468999999 99999999999886 6675 589999888776655 4654 6789999997 58999999987
Q ss_pred hhHHHHHhcccccccccCCCC------C-EEEEe-cCCChhHHHHHHHHHHHcCCcE
Q 022909 138 PESAMDVACGKHGAASGMGPG------K-GYVDV-STVDGDTSKLINGHIKATGASF 186 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~------~-~lin~-s~~~~~~~~~l~~~l~~~~~~~ 186 (290)
..+...+. ..++.| + +++.- ......+.+++.++.++.++.+
T Consensus 100 ~~H~~~~~-------~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~ 149 (438)
T 3btv_A 100 ASHYEVVM-------PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQT 149 (438)
T ss_dssp HHHHHHHH-------HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHH-------HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeE
Confidence 65544433 223334 3 44442 2345667778888887776554
No 231
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.32 E-value=1.2e-06 Score=76.95 Aligned_cols=66 Identities=18% Similarity=0.380 Sum_probs=49.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchh--hHH-hCCC------c--cCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCD--PLI-SLGA------K--YQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~--~~~-~~g~------~--~~~~~~~~~~~aDivv~~~p~ 137 (290)
.|||+|||+|.||..++..|...|+ +|.++|+++++.+ ... ..+. . ...+. +.++++|+|+++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGP 85 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCCC
Confidence 5899999999999999999999998 9999999976554 121 1111 1 11243 567899999999954
No 232
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.31 E-value=5.4e-07 Score=77.55 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=78.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCChhHHH---HHh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADPESAM---DVA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~~~~~---~~~ 145 (290)
++++.|||+|.+|++++..|...|. +|++++|++++.+.+.+ .+.....++. +.++|+||.++|...... ...
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~~ 196 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMDL 196 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCCC
Confidence 5789999999999999999999997 89999999888777665 2332222222 468999999999654211 000
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeC
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 189 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~ 189 (290)
.-..+.++++.+++|+...+. .+ .+.+..++.|..+++.
T Consensus 197 ---~~~~~~l~~~~~v~DlvY~P~-~T-~ll~~A~~~G~~~i~G 235 (271)
T 1npy_A 197 ---AFPKAFIDNASVAFDVVAMPV-ET-PFIRYAQARGKQTISG 235 (271)
T ss_dssp ---SSCHHHHHHCSEEEECCCSSS-SC-HHHHHHHHTTCEEECH
T ss_pred ---CCCHHHcCCCCEEEEeecCCC-CC-HHHHHHHHCCCEEECC
Confidence 000123567889999976443 33 6777777778777653
No 233
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.30 E-value=4.3e-07 Score=78.25 Aligned_cols=111 Identities=21% Similarity=0.220 Sum_probs=74.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-----CCccCCCHHHHhh-cCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-----GAKYQPSPDEVAA-SCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-----g~~~~~~~~~~~~-~aDivv~~~p~~~~~~~~ 144 (290)
++++.|+|+|.+|++++..|...|.+|++++|++++.+.+.+. .+. ..+++++.+ ++|+||.++|..... .+
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~-~~~~~~~~~~~~DivIn~t~~~~~~-~~ 196 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ-AVSMDSIPLQTYDLVINATSAGLSG-GT 196 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE-EEEGGGCCCSCCSEEEECCCC-------
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE-EeeHHHhccCCCCEEEECCCCCCCC-CC
Confidence 6899999999999999999999999999999998877766541 111 123444334 899999999875431 11
Q ss_pred hcccccc-cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCc-EEe
Q 022909 145 ACGKHGA-ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 188 (290)
Q Consensus 145 ~~~~~~~-~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~-~~~ 188 (290)
. .+ .+.++++.+++|++..+..++. +.+..++.|.. +++
T Consensus 197 ~----~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 197 A----SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD 237 (272)
T ss_dssp -----CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred C----CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence 0 01 1234678899999876544233 45566666765 553
No 234
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.29 E-value=4.9e-06 Score=73.04 Aligned_cols=109 Identities=10% Similarity=0.091 Sum_probs=78.6
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeE-EEEeCCccchhhHHh--CCCccCCCHHHHh----------hcCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDV-TVWNRTKSKCDPLIS--LGAKYQPSPDEVA----------ASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V-~~~d~~~~~~~~~~~--~g~~~~~~~~~~~----------~~aDivv~~~p 136 (290)
++||||||+ |.||...++.+...+.++ .++|+++++.. +.+ .+...++++++++ .+.|+|++++|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGL-VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGG-GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHH-HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 589999999 789999999999888765 58899887643 333 2466778999988 46899999998
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
...+..... ..++.|+.++--= .....+.++|.++.++.+..+.
T Consensus 82 ~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 82 NHLHYPQIR-------MALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp GGGHHHHHH-------HHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred chhhHHHHH-------HHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 766544433 3455666654321 3455677788888888776653
No 235
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.28 E-value=5.1e-06 Score=73.11 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=78.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeE-EEEeCCccchhhHHh--CCCccCCCHHHHh-----------hcCCeEEEEe
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDV-TVWNRTKSKCDPLIS--LGAKYQPSPDEVA-----------ASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V-~~~d~~~~~~~~~~~--~g~~~~~~~~~~~-----------~~aDivv~~~ 135 (290)
+++|||||+ |.||...++.+...+.++ .++|+++++. .+.+ .+...++++++++ .+.|+|++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~t 81 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICS 81 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECC
Confidence 589999999 799999999999888765 5889988764 3333 2566778999987 4689999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEEe
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
|...+..... ..++.|+.++--= .....+.+++.+..++.+..+..
T Consensus 82 P~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 129 (318)
T 3oa2_A 82 PNYLHYPHIA-------AGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYN 129 (318)
T ss_dssp CGGGHHHHHH-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CcHHHHHHHH-------HHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 8766554443 3345565544221 34556777888888887766543
No 236
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.28 E-value=3.7e-06 Score=74.45 Aligned_cols=105 Identities=11% Similarity=0.100 Sum_probs=74.8
Q ss_pred CCeEEEEcccHhHH-HHHHHHHHC-CCeE-EEEeCCccchhhHHhCCCccCCCHHHHhhc---CCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGT-PMAQNLLKA-GCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAAS---CDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~-~la~~l~~~-g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~---aDivv~~~p~~~~~~~~ 144 (290)
..||||||+|.||+ ..++.+... +.+| .++|+++++ .|+..++++++++++ .|+|++++|........
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~ 98 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAA 98 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 47999999999998 788888875 5665 478888653 357777899999976 89999999865443332
Q ss_pred hcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEEe
Q 022909 145 ACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
...++.|+.++--- .....+.+++.+..++.++.+.-
T Consensus 99 -------~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 137 (330)
T 4ew6_A 99 -------YKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFA 137 (330)
T ss_dssp -------HHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred -------HHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEE
Confidence 33455666555221 33455667888888887776544
No 237
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.27 E-value=2.7e-05 Score=65.86 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=87.0
Q ss_pred CCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe-CccC
Q 022909 114 GAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE-APVS 192 (290)
Q Consensus 114 g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~-~p~~ 192 (290)
|++.+++-.|+++++|++++-+|....+..++ +++++.+++|+++.|+.+.++...-...+.++++.+.+-+ ||-.
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Ia---kkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaa 204 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDII---KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGC 204 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHH---HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHH---HHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence 77788889999999999999999988888888 7789999999999999999988766665556655566655 4532
Q ss_pred CCCccccCCceEEEec-CCHHHHHHHHHHHHHhCCcEEEeC
Q 022909 193 GSKKPAEDGQLIFLAA-GDKSLYNTVAPLLDIMGKSRFYLG 232 (290)
Q Consensus 193 ~~~~~~~~~~~~~~~~-~~~~~~~~v~~ll~~~G~~~~~~~ 232 (290)
-+.. .+....-.+ .+++.++++.++.+..|+.+|.+.
T Consensus 205 VPgt---~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 205 VPEM---KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp CTTT---CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCCC---CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 2211 344332222 468899999999999999998865
No 238
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.25 E-value=1.3e-06 Score=80.81 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=51.0
Q ss_pred CCeEEEEcccHh-HHHHHHHHHHC-----CCeEEEEeCCccchhhHHh--------C----CCccCCCHHHHhhcCCeEE
Q 022909 71 PGRIGFLGMGIM-GTPMAQNLLKA-----GCDVTVWNRTKSKCDPLIS--------L----GAKYQPSPDEVAASCDVTF 132 (290)
Q Consensus 71 ~~~IgiiG~G~i-G~~la~~l~~~-----g~~V~~~d~~~~~~~~~~~--------~----g~~~~~~~~~~~~~aDivv 132 (290)
.+||+|||+|.+ |.+++..|... +.+|.+||+++++.+...+ . .+..++++++++++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66688777766 5689999999876544221 1 1333468888999999999
Q ss_pred EEeCC
Q 022909 133 AMLAD 137 (290)
Q Consensus 133 ~~~p~ 137 (290)
+++|.
T Consensus 108 iaag~ 112 (472)
T 1u8x_X 108 AHIRV 112 (472)
T ss_dssp ECCCT
T ss_pred EcCCC
Confidence 99986
No 239
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.24 E-value=7.1e-07 Score=78.12 Aligned_cols=89 Identities=11% Similarity=0.076 Sum_probs=65.5
Q ss_pred CCeEEEEcccHh-HHHHHHHHHHCCCeEEEEeCCccch----hhHHhCCCcc-----C--CCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIM-GTPMAQNLLKAGCDVTVWNRTKSKC----DPLISLGAKY-----Q--PSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~i-G~~la~~l~~~g~~V~~~d~~~~~~----~~~~~~g~~~-----~--~~~~~~~~~aDivv~~~p~~ 138 (290)
++++.|||.|.| |+.+|+.|...|..|++++|+..+. +.+....... + .++++.++++|+||.+++.+
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p 256 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSE 256 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCC
Confidence 899999999976 9999999999999999999984332 2221110111 2 46888999999999999764
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
. .++ . .+++++|+++||++..
T Consensus 257 ~---~vI--~---~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 257 N---YKF--P---TEYIKEGAVCINFACT 277 (320)
T ss_dssp T---CCB--C---TTTSCTTEEEEECSSS
T ss_pred c---cee--C---HHHcCCCeEEEEcCCC
Confidence 3 124 2 3457899999999754
No 240
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.23 E-value=2.7e-06 Score=77.95 Aligned_cols=110 Identities=21% Similarity=0.287 Sum_probs=74.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHH----------CCCeE-EEEeCCccchhhHHhCCCccCCCHHHHhhc--CCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK----------AGCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAAS--CDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~----------~g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~--aDivv~~~p~ 137 (290)
..+|||||+|.||+.+++.+.. .+.+| .++|+++++.+.+. .+...++++++++++ .|+|++++|.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEECCCS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEEcCCC
Confidence 4689999999999999987753 24454 47788877655442 245667899999974 7999999986
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEecCC-ChhHHHHHHHHHHHcCCcEE
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s~~-~~~~~~~l~~~l~~~~~~~~ 187 (290)
+......+ ...++.|..++-..-. .....++|.+..++++..+.
T Consensus 89 ~~~h~~~~------~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~ 133 (444)
T 3mtj_A 89 LEPARELV------MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVT 133 (444)
T ss_dssp STTHHHHH------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred chHHHHHH------HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEE
Confidence 33333333 3556788887743221 11223577777788887763
No 241
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.23 E-value=3e-06 Score=70.34 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=54.0
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCcc----CCC---HHHH-hhcCCeEEEEeCChhHH
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKY----QPS---PDEV-AASCDVTFAMLADPESA 141 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~----~~~---~~~~-~~~aDivv~~~p~~~~~ 141 (290)
|+|.|+|+|.+|+.+++.|...|++|.++|+++++.+.+.+ .+... ..+ +.++ ++++|+|++++|.+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 57999999999999999999999999999999988777654 34321 112 2232 56799999999876543
No 242
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.22 E-value=2.5e-06 Score=74.21 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=63.5
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHh----C--C--CccCCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LIS----L--G--AKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~----~--g--~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
|||+|||+|.+|.+++..|...|+ +|.+||+++++.+. +.+ . . +...++ .+.++++|+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999998887 89999999876541 111 1 1 222345 7789999999999764
Q ss_pred hh---H--------HHHHhcccccccccCCCCCEEEEecC
Q 022909 138 PE---S--------AMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 138 ~~---~--------~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+. . ...++..-.+.+....|+++++++|+
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 31 1 11222110112334478899999863
No 243
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.21 E-value=3.7e-06 Score=74.12 Aligned_cols=66 Identities=15% Similarity=0.219 Sum_probs=51.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhh----HHh------CCC--ccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDP----LIS------LGA--KYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~----~~~------~g~--~~~~~~~~~~~~aDivv~~~p~ 137 (290)
.+||+|||+|.+|..++..|...|+ +|.++|+++++.+. +.+ ... ..+++. +.+++||+||++.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~ 85 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGV 85 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCc
Confidence 5799999999999999999999998 99999999876532 111 122 223455 788999999999753
No 244
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.21 E-value=2.8e-06 Score=71.82 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=72.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeE-EEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
.|||+++|+|+||+.+++. . ++++ .+|+ ++..++ |+..+++++++++++|+|+.|. ..+.++...
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel---gv~a~~d~d~lla~pD~VVe~A-~~~av~e~~---- 77 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI---PGVVRLDEFQVPSDVSTVVECA-SPEAVKEYS---- 77 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC---SSSEECSSCCCCTTCCEEEECS-CHHHHHHHH----
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc---CceeeCCHHHHhhCCCEEEECC-CHHHHHHHH----
Confidence 6999999999999999998 4 7776 5666 343333 6666788999998999999986 445555433
Q ss_pred cccccCCCCCEEEEecCCChhHH---HHHHHHHHHcCCcE
Q 022909 150 GAASGMGPGKGYVDVSTVDGDTS---KLINGHIKATGASF 186 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~~~~~---~~l~~~l~~~~~~~ 186 (290)
.+.|+.|.-+|-+|.+...+. +.|.++.++++..+
T Consensus 78 --~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l 115 (253)
T 1j5p_A 78 --LQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARV 115 (253)
T ss_dssp --HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEE
T ss_pred --HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeE
Confidence 456788888888876644433 56666666666554
No 245
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.21 E-value=4.6e-06 Score=73.40 Aligned_cols=69 Identities=14% Similarity=0.233 Sum_probs=48.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhH-Hh--CC------CccCCCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPL-IS--LG------AKYQPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~-~~--~g------~~~~~~~~~~~~~aDivv~~~p~~~ 139 (290)
.+||+|||+|.+|..++..+...|. +|.++|.++++.+.. .+ .. +....+..+.+++||+|+++.+.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4799999999999999999999887 899999997665431 11 11 1111223566899999999988653
No 246
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.21 E-value=3.3e-06 Score=74.47 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=63.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHhC------CCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LISL------GAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~~------g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|||+|.||..++..|+..|+ +|.++|+++++.+. +.+. ++...++..+.+++||+||++.+.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5899999999999999999998887 89999998876544 3221 2222233346789999999998643
Q ss_pred h---H--------HHHHhcccccccccCCCCCEEEEecC
Q 022909 139 E---S--------AMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~---~--------~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
. . ...++..-.+.+....|+++++++|.
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 1 1 11112100112233467889998864
No 247
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.21 E-value=2e-06 Score=79.33 Aligned_cols=110 Identities=22% Similarity=0.218 Sum_probs=70.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-C-Cc----cCC---CHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-G-AK----YQP---SPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g-~~----~~~---~~~~~~~~aDivv~~~p~~~~~ 141 (290)
+++|+|+|+|.||+.+++.|...|++|.+++|++++.+.+.+. + +. ... +++++++++|+|+.++|.....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence 5889999999999999999999999999999998776655431 1 11 112 3446778999999999864322
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
.+. ...++++..+++.+...+ ....+.++.++.|+.++.
T Consensus 83 -~i~------~a~l~~g~~vvd~~~~~~-~~~~l~~aA~~aGv~~i~ 121 (450)
T 1ff9_A 83 -TVI------KSAIRQKKHVVTTSYVSP-AMMELDQAAKDAGITVMN 121 (450)
T ss_dssp -HHH------HHHHHHTCEEEESSCCCH-HHHHTHHHHHHTTCEEEC
T ss_pred -HHH------HHHHhCCCeEEEeecccH-HHHHHHHHHHHCCCeEEe
Confidence 111 122334556666543232 234555666666665544
No 248
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.20 E-value=4.2e-06 Score=72.25 Aligned_cols=115 Identities=16% Similarity=0.160 Sum_probs=72.4
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHC-CCeEE-EEeCCccc-----hhhHH---hCCCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKA-GCDVT-VWNRTKSK-----CDPLI---SLGAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~-g~~V~-~~d~~~~~-----~~~~~---~~g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
++.||+|+| +|+||+.+++.+... ++++. ++|+++.. ..++. ..|+..++++++++.++|+||-..+ +
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~-p 98 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ-P 98 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC-H
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC-H
Confidence 367999999 999999999998754 67754 66886432 11221 2467778899999999999987764 4
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCCChh-HHHHHHHHHHHcCCcEEeCccCC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-TSKLINGHIKATGASFLEAPVSG 193 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~-~~~~l~~~l~~~~~~~~~~p~~~ 193 (290)
..+...+ ...++.|.-+|-.+++-.. ..+.|.++.+ .+.++-+|+|.
T Consensus 99 ~a~~~~~------~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~--~~~~~~a~N~S 146 (288)
T 3ijp_A 99 QASVLYA------NYAAQKSLIHIIGTTGFSKTEEAQIADFAK--YTTIVKSGNMS 146 (288)
T ss_dssp HHHHHHH------HHHHHHTCEEEECCCCCCHHHHHHHHHHHT--TSEEEECSCCC
T ss_pred HHHHHHH------HHHHHcCCCEEEECCCCCHHHHHHHHHHhC--cCCEEEECCCc
Confidence 4444433 2334556666655555332 2334444433 35556666653
No 249
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=98.19 E-value=9.6e-07 Score=76.28 Aligned_cols=109 Identities=15% Similarity=0.037 Sum_probs=75.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC-CCccCCCHHHHhhcCCeEEEEeCChhH--HHH-Hh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL-GAKYQPSPDEVAASCDVTFAMLADPES--AMD-VA 145 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~aDivv~~~p~~~~--~~~-~~ 145 (290)
++++.|+|+|.+|++++..|...|. +|++++|++++.+.+++. .....+++++ + ++|+||.++|.... ... .+
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~pi 199 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESPV 199 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCCC
Confidence 7899999999999999999999998 899999999887766542 1111123333 4 89999999986321 110 11
Q ss_pred cccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
. .+.++++.+++|+.-.+..+ .+.++.++.|+..++
T Consensus 200 --~---~~~l~~~~~v~DlvY~P~~T--~ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 200 --D---KEVVAKFSSAVDLIYNPVET--LFLKYARESGVKAVN 235 (282)
T ss_dssp --C---HHHHTTCSEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred --C---HHHcCCCCEEEEEeeCCCCC--HHHHHHHHCcCeEeC
Confidence 1 23467889999986544332 456666777766654
No 250
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.18 E-value=4.1e-06 Score=71.43 Aligned_cols=74 Identities=16% Similarity=0.282 Sum_probs=61.9
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|. +|+.+|..|...|..|++++++. .++++.++++|+||.+++.+. ++ .
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------~~L~~~~~~ADIVI~Avg~p~----~I--~- 208 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------KDIGSMTRSSKIVVVAVGRPG----FL--N- 208 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHHSSEEEECSSCTT----CB--C-
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------ccHHHhhccCCEEEECCCCCc----cc--c-
Confidence 89999999986 89999999999999999998642 478889999999999998743 34 2
Q ss_pred cccccCCCCCEEEEecCC
Q 022909 150 GAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~ 167 (290)
.+++|+|+++||++..
T Consensus 209 --~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 209 --REMVTPGSVVIDVGIN 224 (276)
T ss_dssp --GGGCCTTCEEEECCCE
T ss_pred --HhhccCCcEEEEeccC
Confidence 3557999999999753
No 251
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.17 E-value=2.9e-06 Score=78.47 Aligned_cols=67 Identities=19% Similarity=0.329 Sum_probs=50.6
Q ss_pred CCeEEEEcccHh--HHHHHHHHHHC----CCeEEEEeCCccchhhHHh--------C----CCccCCCHHHHhhcCCeEE
Q 022909 71 PGRIGFLGMGIM--GTPMAQNLLKA----GCDVTVWNRTKSKCDPLIS--------L----GAKYQPSPDEVAASCDVTF 132 (290)
Q Consensus 71 ~~~IgiiG~G~i--G~~la~~l~~~----g~~V~~~d~~~~~~~~~~~--------~----g~~~~~~~~~~~~~aDivv 132 (290)
++||+|||+|.| |.+++..+... |.+|.+||+++++.+.... . .+..++++++.+++||+||
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 579999999997 56667777643 7899999999876544221 1 1334568888899999999
Q ss_pred EEeCC
Q 022909 133 AMLAD 137 (290)
Q Consensus 133 ~~~p~ 137 (290)
+++|.
T Consensus 83 iaagv 87 (480)
T 1obb_A 83 NTAMV 87 (480)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99974
No 252
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=98.17 E-value=6.2e-06 Score=72.30 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=76.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCC---ccchhhHHh-----CCC----ccCCC---HHHHhhcCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRT---KSKCDPLIS-----LGA----KYQPS---PDEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~---~~~~~~~~~-----~g~----~~~~~---~~~~~~~aDivv~~ 134 (290)
++++.|+|+|.+|++++..|...|. +|.+++|+ .++.+++.+ .+. ...++ +.+.+.++|+||.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINa 233 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNA 233 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEEC
Confidence 7899999999999999999999998 89999999 666555443 121 11223 44567899999999
Q ss_pred eCChhHHH--H-HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 135 LADPESAM--D-VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 135 ~p~~~~~~--~-~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+|..-.-. . .+ .....++++.+++|+.-.+..+ .+.+..++.|+..++
T Consensus 234 Tp~Gm~~~~~~~p~----~~~~~l~~~~~V~DlvY~P~~T--~ll~~A~~~G~~~~~ 284 (315)
T 3tnl_A 234 TGVGMKPFEGETLL----PSADMLRPELIVSDVVYKPTKT--RLLEIAEEQGCQTLN 284 (315)
T ss_dssp SSTTSTTSTTCCSC----CCGGGCCTTCEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred ccCCCCCCCCCCCC----CcHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEeC
Confidence 98532211 0 01 0134578899999996654432 455666677766554
No 253
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.17 E-value=4.6e-06 Score=72.85 Aligned_cols=91 Identities=10% Similarity=0.077 Sum_probs=60.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccch---hhHHh---CCCccCCCHHHHhhcCCeEEEEeC------
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKC---DPLIS---LGAKYQPSPDEVAASCDVTFAMLA------ 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~---~~~~~---~g~~~~~~~~~~~~~aDivv~~~p------ 136 (290)
.+||+|||+|.||..++..+...|+ +|.++|++++.. ..+.. ..+....++ +.+++||+||++..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 5789999999999999999998888 999999987421 11221 123444577 66899999999962
Q ss_pred -------ChhHH-HHHhcccccccccCCCCCEEEEecC
Q 022909 137 -------DPESA-MDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 137 -------~~~~~-~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.+... +.++ +++.+ ..|++++|++|+
T Consensus 93 tR~dl~~~n~~i~~~i~---~~i~~-~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALV---PALGH-YSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHHHHHH---HHHHH-HTTTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHH---HHHHH-hCCCeEEEEcCC
Confidence 22222 2222 22222 348889888876
No 254
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.17 E-value=6.3e-06 Score=74.32 Aligned_cols=110 Identities=13% Similarity=0.127 Sum_probs=78.4
Q ss_pred CCeEEEEc-ccHhHHH-HH----HHHHHCC-CeE----------EEEeCCccchhhHHh-CCC-ccCCCHHHHhhc--CC
Q 022909 71 PGRIGFLG-MGIMGTP-MA----QNLLKAG-CDV----------TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAAS--CD 129 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~-la----~~l~~~g-~~V----------~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~~--aD 129 (290)
..|||||| +|.||.. .+ ..+...+ ..+ .++|+++++.+.+++ .|+ ..++++++++++ .|
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD 85 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDT 85 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCC
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCC
Confidence 47899999 9999998 77 7776544 222 489999988877765 677 367899999976 89
Q ss_pred eEEEEeCChhHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCcEE
Q 022909 130 VTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 130 ivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+|++++|...+...+ ...++.|+.++--= .....+.+++.+..++.++.+.
T Consensus 86 ~V~i~tp~~~h~~~~-------~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~ 138 (383)
T 3oqb_A 86 MFFDAATTQARPGLL-------TQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHG 138 (383)
T ss_dssp EEEECSCSSSSHHHH-------HHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred EEEECCCchHHHHHH-------HHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 999999876554433 34456676665211 3455667788888888776543
No 255
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.17 E-value=3e-06 Score=78.46 Aligned_cols=110 Identities=22% Similarity=0.283 Sum_probs=76.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEEEEeCCccchhhHHhC-CCcc----CC---CHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLISL-GAKY----QP---SPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~~-g~~~----~~---~~~~~~~~aDivv~~~p~~~~~ 141 (290)
+++|.|+|+|.+|+.++..|... |++|.+++|++++.+.+.+. ++.. .. ++.++++++|+||.++|....
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~- 101 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH- 101 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH-
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh-
Confidence 68999999999999999999987 78999999998877766542 3321 11 345677899999999986432
Q ss_pred HHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
..+. ...++++..+++.+...+ ....+.+..++.|+.+++
T Consensus 102 ~~v~------~a~l~~g~~vvd~~~~~p-~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 102 PNVV------KSAIRTKTDVVTSSYISP-ALRELEPEIVKAGITVMN 141 (467)
T ss_dssp HHHH------HHHHHHTCEEEECSCCCH-HHHHHHHHHHHHTCEEEC
T ss_pred HHHH------HHHHhcCCEEEEeecCCH-HHHHHHHHHHHcCCEEEe
Confidence 2222 123456777777754333 345666666666666554
No 256
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.16 E-value=4.5e-06 Score=65.21 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=51.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCc-cchhhHHh---CCCccC----CC---HHHH-hhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTK-SKCDPLIS---LGAKYQ----PS---PDEV-AASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~-~~~~~~~~---~g~~~~----~~---~~~~-~~~aDivv~~~p~~ 138 (290)
.++|.|+|+|.+|+.+++.|...|++|.+.++++ ++.+.+.+ .|+... .+ +.++ ++++|.|+++++.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5789999999999999999999999999999984 43333332 233211 12 3333 67899999998775
Q ss_pred hHH
Q 022909 139 ESA 141 (290)
Q Consensus 139 ~~~ 141 (290)
...
T Consensus 83 ~~n 85 (153)
T 1id1_A 83 ADN 85 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 257
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.15 E-value=3.4e-06 Score=74.80 Aligned_cols=107 Identities=9% Similarity=-0.037 Sum_probs=73.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCCc-cchhhHHh----CC--CccCCCHHHHhhc--CCeEEEEeCChhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRTK-SKCDPLIS----LG--AKYQPSPDEVAAS--CDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~~-~~~~~~~~----~g--~~~~~~~~~~~~~--aDivv~~~p~~~~ 140 (290)
++||||||+|.+|...++.+ ..+.+|. ++|+++ ++.+.+++ .+ ...++++++++++ .|+|++++|...+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 58999999999999888777 5567765 788887 45544433 34 3677899999975 8999999987555
Q ss_pred HHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHHHHHcCCc
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGAS 185 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~l~~~~~~ 185 (290)
..... ..++.|+.++--= .....+.+++.++.++.+..
T Consensus 81 ~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 81 GKILL-------EALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred HHHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 43332 3345565544211 33455677888888887765
No 258
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.15 E-value=5.4e-06 Score=72.74 Aligned_cols=95 Identities=13% Similarity=0.194 Sum_probs=62.6
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHh------CCCccC-CCHHHHhhcCCeEEEEeCCh
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LIS------LGAKYQ-PSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~------~g~~~~-~~~~~~~~~aDivv~~~p~~ 138 (290)
|||+|||+|.||..++..++..|. +|.++|+++++.+. +.+ ...... ++..+.+++||+|+++.+.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 689999999999999999998886 89999999876442 221 122222 24567789999999998654
Q ss_pred hH-----------HHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ES-----------AMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~-----------~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.. ...++..-.+.+....|++++++.|+
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 21 11222110112333468889999864
No 259
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.15 E-value=5e-06 Score=74.73 Aligned_cols=108 Identities=15% Similarity=0.125 Sum_probs=72.5
Q ss_pred CeEEEEcccHhHHHHHHHHHHCC--------CeE-EEEeCCccchhhHHh-CCC-ccCCCHHHHhhc--CCeEEEEeCCh
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAG--------CDV-TVWNRTKSKCDPLIS-LGA-KYQPSPDEVAAS--CDVTFAMLADP 138 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g--------~~V-~~~d~~~~~~~~~~~-~g~-~~~~~~~~~~~~--aDivv~~~p~~ 138 (290)
-+|||||+|.||+..++.+.... .+| .++|+++++.+.+++ .|+ ..++++++++++ .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 58999999999999888876532 244 588999988877665 565 456899999975 79999999986
Q ss_pred hHHHHHhcccccccccCCCCCEEEEec--CCChhHHHHHHHH---HHHcCCcE
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGH---IKATGASF 186 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s--~~~~~~~~~l~~~---l~~~~~~~ 186 (290)
.+....+ ..++.|+.++--= .....+.++|.+. .++.++.+
T Consensus 87 ~H~~~~~-------~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~ 132 (390)
T 4h3v_A 87 SHAEIAI-------AALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRS 132 (390)
T ss_dssp GHHHHHH-------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHH-------HHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCce
Confidence 6655443 3455666554221 2334455566443 44455443
No 260
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.15 E-value=7.6e-06 Score=72.00 Aligned_cols=95 Identities=8% Similarity=0.117 Sum_probs=62.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhH----Hh------CCCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPL----IS------LGAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~----~~------~g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|||+|.+|..++..+...|. +|.++|+++++.+.. .+ ..+....+..+.+++||+|+++.+.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 5799999999999999999988774 899999987654421 11 11222224466789999999998754
Q ss_pred hH-----------HHHHhcccccccccCCCCCEEEEec
Q 022909 139 ES-----------AMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 139 ~~-----------~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
.. ...++..-.+......|++++|+.|
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 86 QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 21 1122210001122337899999875
No 261
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.15 E-value=6.8e-06 Score=70.54 Aligned_cols=74 Identities=23% Similarity=0.312 Sum_probs=61.9
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|. +|+.+|+.|...|..|++++++. .++.+.++++|+||.+++.+. ++ .
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~----lI--~- 217 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKPG----FI--P- 217 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCTT----CB--C-
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCcC----cC--C-
Confidence 89999999997 59999999999999999997543 367888999999999998644 34 2
Q ss_pred cccccCCCCCEEEEecCC
Q 022909 150 GAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~ 167 (290)
.+++|+|+++||++..
T Consensus 218 --~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 218 --GDWIKEGAIVIDVGIN 233 (288)
T ss_dssp --TTTSCTTCEEEECCCE
T ss_pred --HHHcCCCcEEEEccCC
Confidence 3457999999999753
No 262
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.14 E-value=4.8e-06 Score=73.23 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhH----HhC------CCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPL----ISL------GAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~----~~~------g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|||+|.||..++..++..|. +|.++|+++++.+.. .+. ......+..+.+++||+|+++.|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 5799999999999999999987775 899999997644321 111 1111123456789999999997654
No 263
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.13 E-value=7.6e-06 Score=72.06 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=50.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhh----HHh------CCCcc--CCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDP----LIS------LGAKY--QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~----~~~------~g~~~--~~~~~~~~~~aDivv~~~p~ 137 (290)
.+||+|||+|.||..++..++..|+ +|.++|+++++.+. +.+ ..... .++ .+.+++||+||++.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCCc
Confidence 4899999999999999999998887 99999999876542 221 12222 234 4688999999999754
No 264
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.12 E-value=8.3e-06 Score=71.75 Aligned_cols=96 Identities=10% Similarity=0.162 Sum_probs=62.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHH----hC-----CCccCCCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLI----SL-----GAKYQPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~----~~-----g~~~~~~~~~~~~~aDivv~~~p~~~ 139 (290)
.+||+|||+|.+|..++..+...+. ++.++|+++++.+... +. .+....+..+.+++||+|+++.+.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 5899999999999999999988776 8999999876654311 11 12222244667899999999987543
Q ss_pred HH-----------HHHhcccccccccCCCCCEEEEecC
Q 022909 140 SA-----------MDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 140 ~~-----------~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.- ..++..-.+......|++++++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 21 1222100011223368899998843
No 265
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.12 E-value=5.2e-06 Score=71.73 Aligned_cols=73 Identities=29% Similarity=0.412 Sum_probs=60.5
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHH--HHhhcCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPD--EVAASCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~--~~~~~aDivv~~~p~~~~~~~~~~~ 147 (290)
++++.|||.|. +|+.+|..|...|..|++++++.. +++ +.++++|+||.+++.+. ++
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~----~I-- 224 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPG----YV-- 224 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTT----CB--
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCC----CC--
Confidence 89999999987 799999999999999999987432 344 88999999999998743 34
Q ss_pred cccccccCCCCCEEEEecC
Q 022909 148 KHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~ 166 (290)
. .+++|+|+++||++.
T Consensus 225 ~---~~~vk~GavVIDvgi 240 (300)
T 4a26_A 225 K---GEWIKEGAAVVDVGT 240 (300)
T ss_dssp C---GGGSCTTCEEEECCC
T ss_pred c---HHhcCCCcEEEEEec
Confidence 2 355799999999965
No 266
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.12 E-value=6.9e-06 Score=70.52 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=69.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC-CCeEE-EEeCCccch-----hhHH--hCCCccCCCHHHHhhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA-GCDVT-VWNRTKSKC-----DPLI--SLGAKYQPSPDEVAASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~-----~~~~--~~g~~~~~~~~~~~~~aDivv~~~p~~~~ 140 (290)
++||+|+| +|+||+.+++.+... ++++. ++|+++... .++. ..++...++++++++++|+||-+++ +..
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~-p~a 85 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL-PEG 85 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC-HHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC-HHH
Confidence 48999999 899999999998865 56765 468874321 1111 1256677899999999999998875 444
Q ss_pred HHHHhcccccccccCCCCCEEEEecCCChhH-HHHHHHHHHHcCCcEEeCccC
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTVDGDT-SKLINGHIKATGASFLEAPVS 192 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~-~~~l~~~l~~~~~~~~~~p~~ 192 (290)
+...+ ...++.|..+|-.+++-... .+.|.++.+ ...++-.|+|
T Consensus 86 ~~~~~------~~al~~G~~vVigTTG~s~~~~~~L~~aa~--~~~vv~a~N~ 130 (272)
T 4f3y_A 86 TLVHL------DAALRHDVKLVIGTTGFSEPQKAQLRAAGE--KIALVFSANM 130 (272)
T ss_dssp HHHHH------HHHHHHTCEEEECCCCCCHHHHHHHHHHTT--TSEEEECSCC
T ss_pred HHHHH------HHHHHcCCCEEEECCCCCHHHHHHHHHHhc--cCCEEEECCC
Confidence 44443 23345566666554543222 223333322 2445555554
No 267
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.12 E-value=4.1e-06 Score=76.35 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=65.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC----CCHH---HH-hhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ----PSPD---EV-AASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~----~~~~---~~-~~~aDivv~~~p~~~~~~ 142 (290)
+++|.|+|+|++|+.+++.|...|++|++.|+++++.+.+.+.|.... ++.+ ++ ++++|+|+++++.+....
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 578999999999999999999999999999999999888877665422 2222 22 467899999998766554
Q ss_pred HHhcccccccccCCCCCEEEE
Q 022909 143 DVACGKHGAASGMGPGKGYVD 163 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lin 163 (290)
.+. .....+.++..+|-
T Consensus 84 ~i~----~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 84 QLT----EMVKEHFPHLQIIA 100 (413)
T ss_dssp HHH----HHHHHHCTTCEEEE
T ss_pred HHH----HHHHHhCCCCeEEE
Confidence 444 23445556644443
No 268
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.10 E-value=7.7e-06 Score=71.15 Aligned_cols=108 Identities=15% Similarity=0.098 Sum_probs=73.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHH----CCCeEE-EEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK----AGCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~----~g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~ 143 (290)
.++|||||+|.||+..++.+.. .+.++. ++|++... ++.++. ..+++++++ +.|+|++++|...+...
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~ 81 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSHEDY 81 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHH
Confidence 5799999999999999988864 355654 67775421 123454 368999997 57999999987665444
Q ss_pred HhcccccccccCCCCCEE-EEe-cCCChhHHHHHHHHHHHcCCcEEeCc
Q 022909 144 VACGKHGAASGMGPGKGY-VDV-STVDGDTSKLINGHIKATGASFLEAP 190 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l-in~-s~~~~~~~~~l~~~l~~~~~~~~~~p 190 (290)
.. ..++.|+.+ +.- -.....+.+++.+..++.+..+....
T Consensus 82 ~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~ 123 (294)
T 1lc0_A 82 IR-------QFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH 123 (294)
T ss_dssp HH-------HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence 33 345566644 432 23456677888888888877655433
No 269
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.10 E-value=7.9e-06 Score=70.07 Aligned_cols=73 Identities=22% Similarity=0.297 Sum_probs=61.0
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|. +|+.+|..|...|..|++++++. .++++.++++|+||.+++.+. ++ .
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~----~I--~- 219 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHTTKADILIVAVGKPN----FI--T- 219 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCCTT----CB--C-
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhcccCCEEEECCCCCC----CC--C-
Confidence 89999999988 69999999999999999987642 367888999999999998633 34 2
Q ss_pred cccccCCCCCEEEEecC
Q 022909 150 GAASGMGPGKGYVDVST 166 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~ 166 (290)
.+++|+|+++||++.
T Consensus 220 --~~~vk~GavVIDvgi 234 (285)
T 3l07_A 220 --ADMVKEGAVVIDVGI 234 (285)
T ss_dssp --GGGSCTTCEEEECCC
T ss_pred --HHHcCCCcEEEEecc
Confidence 356799999999964
No 270
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.09 E-value=7.4e-06 Score=70.23 Aligned_cols=74 Identities=22% Similarity=0.232 Sum_probs=61.6
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|. +|+.+|..|...|..|++++++. .++++.++++|+||.+++.+. ++ .
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~----~I--~- 218 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGCVN----LL--R- 218 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSCTT----CB--C-
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCCCC----cC--C-
Confidence 89999999987 69999999999999999998642 367788999999999998632 34 2
Q ss_pred cccccCCCCCEEEEecCC
Q 022909 150 GAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~ 167 (290)
.+++|+|+++||++..
T Consensus 219 --~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 219 --SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp --GGGSCTTEEEEECCCE
T ss_pred --HHHcCCCeEEEEeccC
Confidence 3567999999999643
No 271
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.09 E-value=8.8e-06 Score=70.25 Aligned_cols=75 Identities=23% Similarity=0.273 Sum_probs=62.6
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|+ +|+.+|+.|...|..|++++++ ..++.+.++++|+||.+++.+. ++ .
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~----~I--~- 223 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQPE----MV--K- 223 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTT----CB--C-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCcc----cC--C-
Confidence 89999999996 6999999999999999999754 2478889999999999998744 34 2
Q ss_pred cccccCCCCCEEEEecCCC
Q 022909 150 GAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~ 168 (290)
.+++|+|+++||++...
T Consensus 224 --~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 224 --GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp --GGGSCTTCEEEECCCBC
T ss_pred --HHHcCCCcEEEEccCCC
Confidence 34578999999997644
No 272
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.09 E-value=8.8e-06 Score=69.57 Aligned_cols=74 Identities=19% Similarity=0.337 Sum_probs=61.5
Q ss_pred CCeEEEEcccHh-HHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGMGIM-GTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~G~i-G~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~ 147 (290)
++++.|||.|.+ |+.+|+.|... |..|++++++. .++.+.++++|+||.+++.+. ++
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~----~I-- 217 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAH----LL-- 217 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTT----CB--
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCCc----cc--
Confidence 899999999985 99999999998 89999987653 378888999999999998654 34
Q ss_pred cccccccCCCCCEEEEecCC
Q 022909 148 KHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~ 167 (290)
. .+++|+|+++||++..
T Consensus 218 ~---~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 218 T---ADMVRPGAAVIDVGVS 234 (281)
T ss_dssp C---GGGSCTTCEEEECCEE
T ss_pred C---HHHcCCCcEEEEccCC
Confidence 2 3457899999999753
No 273
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.09 E-value=3.3e-06 Score=77.49 Aligned_cols=65 Identities=11% Similarity=0.200 Sum_probs=52.1
Q ss_pred CCeEEEEcccHh--HHHHHHHHHH----CCCeEEEEeCCccchhhHHhC---------CCccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIM--GTPMAQNLLK----AGCDVTVWNRTKSKCDPLISL---------GAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~i--G~~la~~l~~----~g~~V~~~d~~~~~~~~~~~~---------g~~~~~~~~~~~~~aDivv~~~ 135 (290)
++||+|||.|.+ |..++..+.. .| +|.+||+++++.+..... .+..++++++++++||+||+++
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~ai 83 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISI 83 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEecc
Confidence 579999999997 6889988875 46 999999998765543321 2445678999999999999999
Q ss_pred C
Q 022909 136 A 136 (290)
Q Consensus 136 p 136 (290)
+
T Consensus 84 r 84 (450)
T 3fef_A 84 L 84 (450)
T ss_dssp C
T ss_pred c
Confidence 6
No 274
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.07 E-value=8.7e-06 Score=70.59 Aligned_cols=109 Identities=23% Similarity=0.204 Sum_probs=74.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~~ 147 (290)
.++|+|+|+ |++|+.+++.+...|+++ ++..+|.+... ...|+..+.+++++.+ ..|++++++|. +.+..++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~-v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~-- 81 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKI-VAGVTPGKGGM-EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAA-- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEE-EEEECTTCTTC-EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHH--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeE-EEEECCCCCCc-eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHH--
Confidence 588999998 999999999999889983 34444433110 1246777889999988 89999999976 4455555
Q ss_pred cccccccCCCCC-EEEEecCC-ChhHHHHHHHHHHHcCCcEEe
Q 022909 148 KHGAASGMGPGK-GYVDVSTV-DGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 148 ~~~~~~~~~~~~-~lin~s~~-~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+ .|. .+|..+.+ ...+.+++.+..++.++.++.
T Consensus 82 -~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 82 -LEAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp -HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred -HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 11222 222 24445544 344567888888888887664
No 275
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=98.06 E-value=1.8e-05 Score=69.34 Aligned_cols=112 Identities=14% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCC---ccchhhHHh-----CCCc----cCCCH---HHHhhcCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRT---KSKCDPLIS-----LGAK----YQPSP---DEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~---~~~~~~~~~-----~g~~----~~~~~---~~~~~~aDivv~~ 134 (290)
++++.|+|+|.+|++++..|...|. +|.+++|+ .++.+.+.+ .+.. ...++ .+.+.++|+||.+
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINa 227 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNG 227 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEEC
Confidence 7899999999999999999999998 89999999 665555443 1211 12343 5567899999999
Q ss_pred eCChhHHHHHhcccccc---cccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 135 LADPESAMDVACGKHGA---ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 135 ~p~~~~~~~~~~~~~~~---~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+|....-.. ...+ .+.++++.+++|+.-.+..+ .+.+..++.|...++
T Consensus 228 Tp~Gm~~~~----~~~~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~ 278 (312)
T 3t4e_A 228 TKVGMKPLE----NESLIGDVSLLRPELLVTECVYNPHMT--KLLQQAQQAGCKTID 278 (312)
T ss_dssp SSTTSTTST----TCCSCCCGGGSCTTCEEEECCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred CcCCCCCCC----CCcccCCHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEEC
Confidence 986431100 0011 24577889999996554332 455666777766554
No 276
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.05 E-value=8.3e-06 Score=71.86 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=61.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhH----Hh-----CCCccCCCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPL----IS-----LGAKYQPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~----~~-----~g~~~~~~~~~~~~~aDivv~~~p~~~ 139 (290)
++||+|||+|.||..++..|...|. ++.++|+++++.+.. .+ .++....+..+.+++||+||++...+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~~~ 88 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCCCC
Confidence 6899999999999999999998887 899999987765422 11 122223344567899999999875432
Q ss_pred ---HHH-HHhccccc-------ccccCCCCCEEEEecC
Q 022909 140 ---SAM-DVACGKHG-------AASGMGPGKGYVDVST 166 (290)
Q Consensus 140 ---~~~-~~~~~~~~-------~~~~~~~~~~lin~s~ 166 (290)
.++ .++..+.. .+....|+++++++|+
T Consensus 89 kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 89 KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp ---------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 112 11211111 1233457888998864
No 277
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.04 E-value=1.1e-05 Score=69.11 Aligned_cols=75 Identities=25% Similarity=0.336 Sum_probs=61.8
Q ss_pred CCeEEEEcccH-hHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGI-MGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~-iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||.|. +|+.+|..|...|..|+++.++. .++++.++++|+||.+++.+. ++ .
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~p~----~I--~- 219 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGKPG----LV--K- 219 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCCTT----CB--C-
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCCCC----CC--C-
Confidence 89999999877 79999999999999999987642 367788999999999998633 34 2
Q ss_pred cccccCCCCCEEEEecCCC
Q 022909 150 GAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~ 168 (290)
.+++|+|+++||++...
T Consensus 220 --~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 220 --GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp --GGGSCTTCEEEECCSCS
T ss_pred --HHHcCCCeEEEEecccc
Confidence 35679999999997543
No 278
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=98.02 E-value=3.5e-06 Score=73.08 Aligned_cols=110 Identities=16% Similarity=0.102 Sum_probs=73.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhC-C----------CccCCCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISL-G----------AKYQPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~-g----------~~~~~~~~~~~~~aDivv~~~p~~~ 139 (290)
++++.|+|.|.+|++++..|...| +|++++|+.++.+.+.+. + +.. .++.+.+.++|+||.++|...
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIIINATPIGM 205 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEEECSCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEEECCCCCC
Confidence 689999999999999999999999 999999998776655431 0 011 122455678999999988643
Q ss_pred HHH--HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 140 SAM--DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 140 ~~~--~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
... .... . ..+.++++.+++|++..+. .+ .+.+..++.|..++
T Consensus 206 ~~~~~~~~~-~--~~~~l~~~~~v~Dv~y~p~-~t-~ll~~a~~~G~~~~ 250 (287)
T 1nvt_A 206 YPNIDVEPI-V--KAEKLREDMVVMDLIYNPL-ET-VLLKEAKKVNAKTI 250 (287)
T ss_dssp TTCCSSCCS-S--CSTTCCSSSEEEECCCSSS-SC-HHHHHHHTTTCEEE
T ss_pred CCCCCCCCC-C--CHHHcCCCCEEEEeeeCCc-cC-HHHHHHHHCCCEEe
Confidence 210 0000 0 1356788999999986432 22 35555565665543
No 279
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.02 E-value=1.1e-05 Score=71.16 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=51.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHh---C------CCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLIS---L------GAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~---~------g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|||+|.+|..++..+...+. ++.++|+++++.+.... . .+....+..+.+++||+|+++.+.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 5899999999999999999987775 89999998766543211 1 1222224466789999999998754
No 280
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.00 E-value=1e-05 Score=71.00 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=60.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-C-CCe-EEEEeCCccc-hhhH-HhCCCc-cCCCHHHHhh-----cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-A-GCD-VTVWNRTKSK-CDPL-ISLGAK-YQPSPDEVAA-----SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~-g~~-V~~~d~~~~~-~~~~-~~~g~~-~~~~~~~~~~-----~aDivv~~~p~~~ 139 (290)
..+|||||+|.||+.+++.+.. . +.+ +.++|+++++ ...+ ++.|.. ..++.+++++ +.|+|++++|...
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~~ 83 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASA 83 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChHH
Confidence 5799999999999999999955 3 455 4578998877 4444 345664 3456777764 4799999998433
Q ss_pred HHHHHhcccccccccCCC--CCEEEEecC
Q 022909 140 SAMDVACGKHGAASGMGP--GKGYVDVST 166 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~--~~~lin~s~ 166 (290)
+.+... ..++. |..+++.+.
T Consensus 84 h~~~a~-------~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 84 HVQNEA-------LLRQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHHHH-------HHHHHCTTCEEEECST
T ss_pred HHHHHH-------HHHHhCCCCEEEEcCc
Confidence 332222 22334 777777543
No 281
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.00 E-value=1.5e-05 Score=69.94 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=48.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc--cchhhH----Hh------CC--CccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK--SKCDPL----IS------LG--AKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~--~~~~~~----~~------~g--~~~~~~~~~~~~~aDivv~~~ 135 (290)
.+||+|||+|.||..+|..++..|+ +|.++|+++ ++.+.. .+ .. +...++ .+.+++||+||++.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVITA 86 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEEeC
Confidence 4799999999999999999999999 999999983 332211 11 11 222334 45689999999997
Q ss_pred CC
Q 022909 136 AD 137 (290)
Q Consensus 136 p~ 137 (290)
..
T Consensus 87 g~ 88 (315)
T 3tl2_A 87 GI 88 (315)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 282
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.99 E-value=6.5e-06 Score=72.51 Aligned_cols=94 Identities=10% Similarity=-0.031 Sum_probs=63.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhhH----HhC-------CCccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPL----ISL-------GAKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~----~~~-------g~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
.+||+|||+|.||..+|..++..|+ +|.++|+++++.+.. .+. .+....+.++ +++||+||++...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG~ 99 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAGA 99 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCCC
Confidence 5899999999999999999998887 899999987654432 110 1223456665 8999999998654
Q ss_pred hh-----------HHHHHhcc-cccccccCCCCCEEEEecC
Q 022909 138 PE-----------SAMDVACG-KHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 138 ~~-----------~~~~~~~~-~~~~~~~~~~~~~lin~s~ 166 (290)
+. ....++.. .++ +....|++++++.|+
T Consensus 100 p~kpG~tR~dll~~N~~I~k~i~~~-I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 100 RQQEGESRLNLVQRNVNIFKFIIPN-IVKHSPDCLKELHPE 139 (330)
T ss_dssp CCCSSCCTTGGGHHHHHHHHHHHHH-HHHHCTTCEEEECSS
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHH-HHhhCCCceEEeCCC
Confidence 31 11112200 012 223378899998864
No 283
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.99 E-value=4.8e-06 Score=75.78 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=70.8
Q ss_pred CeEEEEcccHhHHHHHHHHHHCC---CeEEEEeCCccchhhHHhC-------CCcc-------CCCHHHHhhc--CCeEE
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAG---CDVTVWNRTKSKCDPLISL-------GAKY-------QPSPDEVAAS--CDVTF 132 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g---~~V~~~d~~~~~~~~~~~~-------g~~~-------~~~~~~~~~~--aDivv 132 (290)
++|+|+|+|.||+.+++.|...| .+|.+++|++++.+.+.+. .+.. .+++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 68999999999999999999988 3899999998887665431 1211 1345677777 89999
Q ss_pred EEeCChhHHHHHhcccccccccCCCCCEEEEecCCChh--------HHHHHHHHHHHcCCcEEe
Q 022909 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD--------TSKLINGHIKATGASFLE 188 (290)
Q Consensus 133 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~--------~~~~l~~~l~~~~~~~~~ 188 (290)
.+.|.... ..+. ...++.+..+++++..... ...++.+..++.|+.++.
T Consensus 82 n~ag~~~~-~~v~------~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 82 NIALPYQD-LTIM------EACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp ECSCGGGH-HHHH------HHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred ECCCcccC-hHHH------HHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 99875432 2333 1223455666665432221 123455555666665444
No 284
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.98 E-value=2.4e-05 Score=68.96 Aligned_cols=114 Identities=18% Similarity=0.128 Sum_probs=72.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC---------CCeEE-EEeCCccchhh------HHh--CCCccCC--CHHHHhhc--C
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA---------GCDVT-VWNRTKSKCDP------LIS--LGAKYQP--SPDEVAAS--C 128 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~---------g~~V~-~~d~~~~~~~~------~~~--~g~~~~~--~~~~~~~~--a 128 (290)
+.+|||||+|.||+.+++.+... +.+|. ++|+++.+.+. +.. ......+ ++++++++ .
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~i 81 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADY 81 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCC
Confidence 37899999999999999999764 45554 77887654321 111 1122333 89999874 8
Q ss_pred CeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChh-HHHHHHHHHHHcCCcEE
Q 022909 129 DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-TSKLINGHIKATGASFL 187 (290)
Q Consensus 129 Divv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~-~~~~l~~~l~~~~~~~~ 187 (290)
|+|+.++|......+.. +-....++.|..++..+-.... ..++|.+..++++..++
T Consensus 82 DvVv~~tp~~~h~~~a~---~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~ 138 (327)
T 3do5_A 82 DVLIEASVTRVDGGEGV---NYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLM 138 (327)
T ss_dssp SEEEECCCCC----CHH---HHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEECCCCcccchhHH---HHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEE
Confidence 99999998754311110 1124567888888755332222 45677777778887665
No 285
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.97 E-value=8.4e-06 Score=75.01 Aligned_cols=68 Identities=12% Similarity=0.093 Sum_probs=51.0
Q ss_pred CCeEEEEcccHh-HHHHHHHHHHC-----CCeEEEEeCCc--cchhhHH--------hCC----CccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGMGIM-GTPMAQNLLKA-----GCDVTVWNRTK--SKCDPLI--------SLG----AKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~i-G~~la~~l~~~-----g~~V~~~d~~~--~~~~~~~--------~~g----~~~~~~~~~~~~~aDi 130 (290)
.+||+|||.|.+ |.+++..|... +.+|.+||+++ ++.+... ..+ +..+.++.+.+++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 479999999999 88888777763 56899999998 6644311 111 2334678889999999
Q ss_pred EEEEeCCh
Q 022909 131 TFAMLADP 138 (290)
Q Consensus 131 vv~~~p~~ 138 (290)
|+++.|..
T Consensus 87 VVitagv~ 94 (450)
T 1s6y_A 87 VTTQFRVG 94 (450)
T ss_dssp EEECCCTT
T ss_pred EEEcCCCC
Confidence 99999853
No 286
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.96 E-value=1e-05 Score=66.84 Aligned_cols=91 Identities=15% Similarity=0.258 Sum_probs=61.1
Q ss_pred CCeEEEEc-ccHhHHHHHHHHH-HCCCeEEEEeCCcc-chhhHHh--CCC-------ccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLL-KAGCDVTVWNRTKS-KCDPLIS--LGA-------KYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~-~~g~~V~~~d~~~~-~~~~~~~--~g~-------~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
+++|.|.| .|.||+.+++.|. ..|++|.+.+|+++ +.+.+.+ .++ ...++++++++++|+||.+....
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 46699999 5999999999999 89999999999987 6655531 111 11134566788999999887642
Q ss_pred -hHHHHHhcccccccccCC--CCCEEEEecCCC
Q 022909 139 -ESAMDVACGKHGAASGMG--PGKGYVDVSTVD 168 (290)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~--~~~~lin~s~~~ 168 (290)
..++.++ +.|+ ....||++|+..
T Consensus 85 n~~~~~~~-------~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 85 GSDMASIV-------KALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HHHHHHHH-------HHHHHTTCCEEEEEEETT
T ss_pred ChhHHHHH-------HHHHhcCCCeEEEEeece
Confidence 1133333 3332 223677777543
No 287
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.96 E-value=1.9e-05 Score=69.97 Aligned_cols=69 Identities=13% Similarity=0.169 Sum_probs=51.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeE-EEEeCCccchhhHHh-CC------------------CccCCCHHHHhhcCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDV-TVWNRTKSKCDPLIS-LG------------------AKYQPSPDEVAASCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V-~~~d~~~~~~~~~~~-~g------------------~~~~~~~~~~~~~aD 129 (290)
+.||||+|+|.||+.+++.+... +.++ .++|+++++...+.+ .| +....+.++++.+.|
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vD 81 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCC
Confidence 36899999999999999999875 4565 467887665544432 22 234468889988999
Q ss_pred eEEEEeCChh
Q 022909 130 VTFAMLADPE 139 (290)
Q Consensus 130 ivv~~~p~~~ 139 (290)
+|++|+|...
T Consensus 82 vV~~aTp~~~ 91 (334)
T 2czc_A 82 IIVDATPGGI 91 (334)
T ss_dssp EEEECCSTTH
T ss_pred EEEECCCccc
Confidence 9999998754
No 288
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.91 E-value=1.7e-05 Score=70.15 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=71.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--------CCeE-EEEeCCccchhh-H-----H----hCCCc-cCC---CHHHHh-h
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--------GCDV-TVWNRTKSKCDP-L-----I----SLGAK-YQP---SPDEVA-A 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--------g~~V-~~~d~~~~~~~~-~-----~----~~g~~-~~~---~~~~~~-~ 126 (290)
..+|||||+|.||+.+++.+... +.+| .++|+++++... + . ..++. .++ ++++++ .
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~ 85 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALAR 85 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCC
Confidence 47899999999999999998764 2455 477888765433 1 1 11221 344 888888 2
Q ss_pred cCCeEEEEeCCh---hHHHHHhcccccccccCCCCCEEEEecCCC-hhHHHHHHHHHHHcCCcEE
Q 022909 127 SCDVTFAMLADP---ESAMDVACGKHGAASGMGPGKGYVDVSTVD-GDTSKLINGHIKATGASFL 187 (290)
Q Consensus 127 ~aDivv~~~p~~---~~~~~~~~~~~~~~~~~~~~~~lin~s~~~-~~~~~~l~~~l~~~~~~~~ 187 (290)
+.|+|+.++|.. ....... ...++.|+.++...-.. ....++|.+..+++++.+.
T Consensus 86 ~iDvVv~~t~~~~~~~~~~~~~------~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~ 144 (331)
T 3c8m_A 86 DFDIVVDATPASADGKKELAFY------KETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIR 144 (331)
T ss_dssp SCSEEEECSCCCSSSHHHHHHH------HHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCCCCCccchHHHHH------HHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEE
Confidence 589999999874 2222222 45577888887542211 1334577777777776653
No 289
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.90 E-value=4.3e-05 Score=68.26 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=70.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCC----ccch--------hhHHhC-C-CccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRT----KSKC--------DPLISL-G-AKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~----~~~~--------~~~~~~-g-~~~~~~~~~~~~~aDivv~~~ 135 (290)
..||.|+|.|.+|..+++.+...|. +|+++|++ .++. +.+.+. + .....+++|+++++|++|-+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~S 271 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVS 271 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECS
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeC
Confidence 6899999999999999999999998 89999998 5442 222221 1 122457999999999988764
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecCCChh
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD 170 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~ 170 (290)
. + .++ .++.++.|+++.+++.+|+-.+.
T Consensus 272 a-p----~l~--t~emVk~Ma~~pIIfalSNPt~E 299 (388)
T 1vl6_A 272 R-G----NIL--KPEWIKKMSRKPVIFALANPVPE 299 (388)
T ss_dssp C-S----SCS--CHHHHTTSCSSCEEEECCSSSCS
T ss_pred C-C----Ccc--CHHHHHhcCCCCEEEEcCCCCCC
Confidence 3 2 444 45566779999999999976543
No 290
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.87 E-value=1.9e-05 Score=67.92 Aligned_cols=90 Identities=28% Similarity=0.294 Sum_probs=57.8
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHH-CCCeEE-EEeCCccch--hhH------HhCCCccCCCHHHHhhcCCeEEEEeCChh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLK-AGCDVT-VWNRTKSKC--DPL------ISLGAKYQPSPDEVAASCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~-~g~~V~-~~d~~~~~~--~~~------~~~g~~~~~~~~~~~~~aDivv~~~p~~~ 139 (290)
++||+|+|+ |+||+.+++.+.. .|+++. ++|+++++. ..+ ...++...++++++++++|+|+-.++ +.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~-p~ 83 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR-PE 83 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC-HH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC-hH
Confidence 479999998 9999999998774 577766 778775431 111 11234455678888889999996653 34
Q ss_pred HHHHHhcccccccccCCCCCEEEEecCC
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
.+...+ ...++.|..+|-.+++
T Consensus 84 ~~~~~~------~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 84 GTLNHL------AFCRQHGKGMVIGTTG 105 (273)
T ss_dssp HHHHHH------HHHHHTTCEEEECCCC
T ss_pred HHHHHH------HHHHhCCCCEEEECCC
Confidence 444444 2334556555543343
No 291
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.87 E-value=6.4e-06 Score=69.02 Aligned_cols=91 Identities=16% Similarity=0.178 Sum_probs=61.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-CeEEEEeCCccchhhHHhCCC-------ccCCCHHHHhhcCCeEEEEeCChhH-
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLISLGA-------KYQPSPDEVAASCDVTFAMLADPES- 140 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~~g~-------~~~~~~~~~~~~aDivv~~~p~~~~- 140 (290)
+|+|.|.| .|.||+.+++.|...| ++|.+++|++++...+...++ .-.++++++++++|+||.+......
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~ 102 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD 102 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHH
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchh
Confidence 57899999 6999999999999999 899999999876543322121 1122456678889999987754322
Q ss_pred --HHHHhcccccccccCC--CCCEEEEecCCC
Q 022909 141 --AMDVACGKHGAASGMG--PGKGYVDVSTVD 168 (290)
Q Consensus 141 --~~~~~~~~~~~~~~~~--~~~~lin~s~~~ 168 (290)
++.+ ++.++ ....||++|+..
T Consensus 103 ~~~~~~-------~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 103 IQANSV-------IAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp HHHHHH-------HHHHHHTTCCEEEEECCCC
T ss_pred HHHHHH-------HHHHHHcCCCEEEEEecce
Confidence 2233 33332 224678887643
No 292
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.87 E-value=1.8e-05 Score=67.86 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC----CCHHHHhhcCCeEEEEeCC
Q 022909 70 LPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ----PSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 70 ~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~----~~~~~~~~~aDivv~~~p~ 137 (290)
|+|+|.|.|+|.||+.+++.|.+.|++|++.+|++++...+...++... .+++ ++++|+||.+...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 3589999999999999999999999999999999887666554443221 2333 6789999887754
No 293
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.85 E-value=3e-05 Score=67.86 Aligned_cols=65 Identities=23% Similarity=0.205 Sum_probs=48.8
Q ss_pred eEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHH----h------CC--CccCCCHHHHhhcCCeEEEEeCCh
Q 022909 73 RIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLI----S------LG--AKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 73 ~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~----~------~g--~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
||+|||+|.||..++..+...|+ +|.++|+++++.+... + .. +..+.+. +.+++||+|+++.+.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 69999999999999999987787 7999999987654311 1 12 2222455 6789999999996644
No 294
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.85 E-value=3.3e-05 Score=67.99 Aligned_cols=166 Identities=11% Similarity=0.057 Sum_probs=95.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-------CCeEE-EEeCCccch------hh----HHhCC-Cc--cCCCHHHHhh--c
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-------GCDVT-VWNRTKSKC------DP----LISLG-AK--YQPSPDEVAA--S 127 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-------g~~V~-~~d~~~~~~------~~----~~~~g-~~--~~~~~~~~~~--~ 127 (290)
..+|+|||+|.||+.+++.+... +.+|. ++|+++... .. ..+.+ +. .. +.++++. +
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~~~ 82 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMGEA 82 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTTSC
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcCCC
Confidence 47899999999999999999763 34544 667765421 11 11223 21 12 5677775 4
Q ss_pred CCeEEEEeCChhHH---HHHhcccccccccCCCCCEEEEecCCCh-hHHHHHHHHHHHcCCcEEe-CccCCCCccccCCc
Q 022909 128 CDVTFAMLADPESA---MDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGASFLE-APVSGSKKPAEDGQ 202 (290)
Q Consensus 128 aDivv~~~p~~~~~---~~~~~~~~~~~~~~~~~~~lin~s~~~~-~~~~~l~~~l~~~~~~~~~-~p~~~~~~~~~~~~ 202 (290)
.|+|+.++|..... ...+ ...++.|..+|...-... ...++|.+..++++..+.- ..+.++.|
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~------~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giP------ 150 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLY------RMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVP------ 150 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHH------HHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSC------
T ss_pred CCEEEECCCCccccchHHHHH------HHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCH------
Confidence 89999999864221 2222 455778888885533222 2445777777777776643 33322222
Q ss_pred eEEEecCCHHHHHHHHHHHHHhCCcEEEeCCcchHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCC
Q 022909 203 LIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGRS---CTFSYSFLTLEFVDF 266 (290)
Q Consensus 203 ~~~~~~~~~~~~~~v~~ll~~~G~~~~~~~~~g~a~~~k~~~n~~~~~~---~~~~ea~~l~~~~G~ 266 (290)
.++.+++++ -|.++..+..+-++.. |++..-| ..+.|++.-+++.|.
T Consensus 151 ----------ii~~l~~~l--~g~~I~~i~Gi~nGT~-----nyil~~m~~g~~f~~~l~~Aq~~Gy 200 (325)
T 3ing_A 151 ----------LFSVLDYSI--LPSKVKRFRGIVSSTI-----NYVIRNMANGRSLRDVVDDAIKKGI 200 (325)
T ss_dssp ----------CHHHHHHTC--TTCCEEEEEEECCHHH-----HHHHHHHHTTCCHHHHHHHHHHHTC
T ss_pred ----------HHHHHHHHh--hCCCeeEEEEEEEeee-----eEEeecccCCCCHHHHHHHHHHcCC
Confidence 124566655 3455555554444432 2222111 456677777777775
No 295
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.84 E-value=7.1e-05 Score=65.02 Aligned_cols=108 Identities=15% Similarity=0.152 Sum_probs=74.7
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccch-hhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKC-DPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~-~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~ 146 (290)
..++.|+|+ |++|+.+++.+...|++ .++..+|.+. ++ -.|+..+.+++++.+ ..|++++++|. +.+...+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v- 87 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAV- 87 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHH-
Confidence 466888898 99999999999999998 5555555432 11 146777889999988 89999999986 4445544
Q ss_pred ccccccccCCCCCE-EEEecCC-ChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKG-YVDVSTV-DGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~-lin~s~~-~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+ .|.- +|..+.+ +..+.+++.+..++.+++++.
T Consensus 88 --~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 88 --FEAID---AGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp --HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred --HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 12222 2322 4444444 444567888888888887664
No 296
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.82 E-value=3.6e-05 Score=67.41 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=61.2
Q ss_pred CeEEEEcccHhHHHHHHHHHHCC--CeEEEEeCCccchhhHH-h--C------CCccCCCHHHHhhcCCeEEEEeCChhH
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAG--CDVTVWNRTKSKCDPLI-S--L------GAKYQPSPDEVAASCDVTFAMLADPES 140 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g--~~V~~~d~~~~~~~~~~-~--~------g~~~~~~~~~~~~~aDivv~~~p~~~~ 140 (290)
+||+|||+|.+|..++..+...+ .++.++|+++++.+... + . ......+..+.+++||+|+++.+.+..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999998876 48999999976654321 1 1 112211235678999999998865432
Q ss_pred -----------HHHHhcccccccccCCCCCEEEEecC
Q 022909 141 -----------AMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 141 -----------~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+..++..-.+......|++++++.|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 11222100011222368889998844
No 297
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.80 E-value=3e-05 Score=64.89 Aligned_cols=88 Identities=7% Similarity=0.052 Sum_probs=60.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc----CCCHH---HH-hhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY----QPSPD---EV-AASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~----~~~~~---~~-~~~aDivv~~~p~~~~~~ 142 (290)
.++|.|+|+|.+|+.+++.|...|+ |+++++++++.+.+. .++.. ..+.+ ++ ++++|.|++++|.+....
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH
Confidence 5789999999999999999999999 999999988776665 44432 12222 22 568999999998754433
Q ss_pred HHhcccccccccCCCC-CEEEEe
Q 022909 143 DVACGKHGAASGMGPG-KGYVDV 164 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~-~~lin~ 164 (290)
.+. .....+.++ .++..+
T Consensus 87 ~~~----~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 87 HCI----LGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHH----HHHHHHCSSSEEEEEC
T ss_pred HHH----HHHHHHCCCCeEEEEE
Confidence 322 223445566 444433
No 298
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.80 E-value=9.6e-06 Score=67.15 Aligned_cols=68 Identities=10% Similarity=0.151 Sum_probs=45.0
Q ss_pred CCeEEEEcccHhHHHHHHH--HHHCCCeE-EEEeCCccchhhHHh-CCCccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQN--LLKAGCDV-TVWNRTKSKCDPLIS-LGAKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~--l~~~g~~V-~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.++|+|||+|++|+.+++. +...|+++ .++|.++++...... .++...+++++++++.|++++++|..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCch
Confidence 4789999999999999994 44557765 478998876543221 22334567888886669999988763
No 299
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.79 E-value=4.1e-05 Score=67.53 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=62.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHhC-------CCccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LISL-------GAKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~~-------g~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
.+||+|||+|.||..++..+...|. ++.++|+++++.+. +.+. .+....+.+ .+++||+||++...
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~aG~ 97 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIITAGA 97 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEccCC
Confidence 6899999999999999999998887 89999998765543 2211 112244565 58999999998643
Q ss_pred hh---H--------HHHHhcccccccccCCCCCEEEEecC
Q 022909 138 PE---S--------AMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 138 ~~---~--------~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+. . +..++..-.+.+....|+++++++|+
T Consensus 98 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 98 RQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 21 1 11222100011223478899999864
No 300
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.78 E-value=6.7e-05 Score=67.03 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=56.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-CeEEEEeCCccchhhHHh-----CC-----CccCCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLIS-----LG-----AKYQPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~-----~g-----~~~~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|+| +|.+|+.+.+.|.... .++.......+....+.. .+ +.. .+ ++.++++|+|++|+|..
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVS-VK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBC-GG-GCCGGGCSEEEECCCTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCccccccee-cc-hhHhcCCCEEEEcCCch
Confidence 47999999 8999999999998875 376665443322222221 11 111 12 44557899999999874
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCCC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~~ 168 (290)
.. .... ... +.|..+|+.|...
T Consensus 94 ~s-~~~a------~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 94 TT-QEII------KEL-PTALKIVDLSADF 115 (359)
T ss_dssp TH-HHHH------HTS-CTTCEEEECSSTT
T ss_pred hH-HHHH------HHH-hCCCEEEECCccc
Confidence 43 3333 233 6788999998643
No 301
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.78 E-value=7.1e-05 Score=62.40 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=55.2
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC-cc-----CCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA-KY-----QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~-~~-----~~~~~~~~~~aDivv~~~p~ 137 (290)
+|+|.|.|. |.||+.+++.|.+.|++|++.+|++++.+.+.+.++ .. .+++.+.+.+.|+||.+...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 799999996 999999999999999999999999888776655444 21 14567788899999987753
No 302
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.76 E-value=0.00024 Score=59.95 Aligned_cols=99 Identities=19% Similarity=0.175 Sum_probs=61.1
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHhCCCccCCCHHHHhh-cCCeEEEEeCChhHHHHHhcc
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAA-SCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aDivv~~~p~~~~~~~~~~~ 147 (290)
+||+|+|+ |+||+.+++.+... ++++. ++|+. +++++++. .+|+||-+.+. ..+...+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p-~a~~~~~-- 62 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHP-DVVMGNL-- 62 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCT-TTHHHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccCh-HHHHHHH--
Confidence 47999996 99999999998865 88876 55543 24556665 78998866643 4444443
Q ss_pred cccccccCCCCCEEEEecCCChhH-HHHHHHHHHHc-CCcEEeCccC
Q 022909 148 KHGAASGMGPGKGYVDVSTVDGDT-SKLINGHIKAT-GASFLEAPVS 192 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~~~~~-~~~l~~~l~~~-~~~~~~~p~~ 192 (290)
...++.|.-+|-.+++-... .+.+.++.++. ++.++-.|.+
T Consensus 63 ----~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~ 105 (245)
T 1p9l_A 63 ----EFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNF 105 (245)
T ss_dssp ----HHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCC
T ss_pred ----HHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 22344555555444443332 33445544433 6666666655
No 303
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.75 E-value=4.2e-05 Score=65.51 Aligned_cols=114 Identities=15% Similarity=0.122 Sum_probs=77.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhC-----CCccCCCHHHHhhcCCeEEEEeCChhHHHH-
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISL-----GAKYQPSPDEVAASCDVTFAMLADPESAMD- 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~-----g~~~~~~~~~~~~~aDivv~~~p~~~~~~~- 143 (290)
++++.|+|+|..+++++..|...|. +|++++|+.++.+.+.+. .........+.++++|+||.++|.......
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~~~ 204 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTRAE 204 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCSTTCC
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCCCCC
Confidence 7899999999999999999999996 799999999887766541 111111222345789999999985321110
Q ss_pred -HhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 144 -VACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 144 -~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
-+ ....++.++++.++.|+--.+..+ .+.+..++.|...++
T Consensus 205 ~p~--~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~ 246 (269)
T 3tum_A 205 LPL--SAALLATLQPDTLVADVVTSPEIT--PLLNRARQVGCRIQT 246 (269)
T ss_dssp CSS--CHHHHHTCCTTSEEEECCCSSSSC--HHHHHHHHHTCEEEC
T ss_pred CCC--ChHHHhccCCCcEEEEEccCCCCC--HHHHHHHHCcCEEEC
Confidence 01 122345678899999986544332 455666677766654
No 304
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.74 E-value=6.8e-05 Score=66.65 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=56.1
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh--------CCCccCCCHHHHhhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS--------LGAKYQPSPDEVAASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~--------~g~~~~~~~~~~~~~aDivv~~~p~~~~ 140 (290)
++||+|+| +|.+|+.+.+.|..... ++.......+....+.+ ..+. ..+.++ +.++|+|++|+|....
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~-~~~vDvV~~a~g~~~s 81 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK-LEPADILVLALPHGVF 81 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG-CCCCSEEEECCCTTHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH-hcCCCEEEEcCCcHHH
Confidence 57999999 79999999999987654 76655443222222221 1122 223444 4789999999987543
Q ss_pred HHHHhcccccccccCCCCCEEEEecCC
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
.... ...++.|..+|+.|..
T Consensus 82 -~~~a------~~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 82 -AREF------DRYSALAPVLVDLSAD 101 (345)
T ss_dssp -HHTH------HHHHTTCSEEEECSST
T ss_pred -HHHH------HHHHHCCCEEEEcCcc
Confidence 3332 2234678889999764
No 305
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.74 E-value=7.7e-05 Score=65.79 Aligned_cols=68 Identities=13% Similarity=0.220 Sum_probs=49.8
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC--CeEEEEeCCccch--hhHHhCCC----cc---CCCHHHHhhcCCeEEEEeCCh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG--CDVTVWNRTKSKC--DPLISLGA----KY---QPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g--~~V~~~d~~~~~~--~~~~~~g~----~~---~~~~~~~~~~aDivv~~~p~~ 138 (290)
.+||+|+| +|.+|..++..|...| .+|.++|++++.. ..+.+... .. .+++.++++++|+||++.+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 58999999 8999999999999888 7899999876521 11222111 11 225677899999999998643
No 306
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.74 E-value=9.1e-06 Score=71.77 Aligned_cols=102 Identities=13% Similarity=0.182 Sum_probs=66.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC---------CCeE-EEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA---------GCDV-TVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~---------g~~V-~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~ 140 (290)
..+|||||+|.||+.+++.+... +.+| .++|+++++.+.+.. ...++++++++ +.|+|+.++|....
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~--~~~~~d~~~ll-~iDvVve~t~~~~~ 79 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQ--ELLRAEPFDLL-EADLVVEAMGGVEA 79 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCG--GGEESSCCCCT-TCSEEEECCCCSHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCc--ccccCCHHHHh-CCCEEEECCCCcHH
Confidence 47899999999999999999775 3454 477887655432211 13456788888 99999999986543
Q ss_pred HHHHhcccccccccCCCCCEEEEecCCCh--hHHHHHHHHHHHc
Q 022909 141 AMDVACGKHGAASGMGPGKGYVDVSTVDG--DTSKLINGHIKAT 182 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lin~s~~~~--~~~~~l~~~l~~~ 182 (290)
....+ ...++.|+.++..+ -.+ ...++|.+..+++
T Consensus 80 a~~~~------~~AL~aGKhVVtaN-kkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 80 PLRLV------LPALEAGIPLITAN-KALLAEAWESLRPFAEEG 116 (332)
T ss_dssp HHHHH------HHHHHTTCCEEECC-HHHHHHSHHHHHHHHHTT
T ss_pred HHHHH------HHHHHcCCeEEECC-chhHHHHHHHHHHHHHhC
Confidence 33333 34567788777432 112 2334566655544
No 307
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.72 E-value=0.0001 Score=64.57 Aligned_cols=66 Identities=18% Similarity=0.291 Sum_probs=48.5
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHCC--CeEEEEeCCccchh--hHHhC--C--Ccc---CCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKAG--CDVTVWNRTKSKCD--PLISL--G--AKY---QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~g--~~V~~~d~~~~~~~--~~~~~--g--~~~---~~~~~~~~~~aDivv~~~p~ 137 (290)
|||+|||+ |.+|..++..|...| .+|.++|+++.+.. .+.+. . +.. .++++++++++|+|+++...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 58999998 999999999999887 68999999872211 11111 0 122 14678889999999998754
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.69 E-value=1.4e-05 Score=67.84 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=32.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~ 104 (290)
+++|.|||+|.+|..+++.|...|. +|+++|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 6899999999999999999999997 899999986
No 309
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.68 E-value=6.8e-05 Score=66.50 Aligned_cols=66 Identities=11% Similarity=0.203 Sum_probs=51.9
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHhC-----CCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LISL-----GAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~~-----g~~~~~~~~~~~~~aDivv~~~p 136 (290)
++||+|||+ |.+|..+|..+...|. +|.++|+++++.+. +.+. .+...++..+.+++||+||++..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 589999997 9999999999998884 89999998765443 2221 23344678888999999999864
No 310
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.68 E-value=2.2e-05 Score=70.48 Aligned_cols=83 Identities=16% Similarity=0.206 Sum_probs=65.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCC---eEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGC---DVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~---~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
..+|.|||. |+.|+.-++.+...|. +|.++|+++... |.. + +.+.++|+||.++........++
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~----~-~~i~~aDivIn~vlig~~aP~Lv- 281 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGP----F-DEIPQADIFINCIYLSKPIAPFT- 281 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSC----C-THHHHSSEEEECCCCCSSCCCSC-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCc----h-hhHhhCCEEEECcCcCCCCCccc-
Confidence 568999999 9999999999999998 899999876221 222 2 34679999999998744444555
Q ss_pred ccccccccC-CCCCEEEEecC
Q 022909 147 GKHGAASGM-GPGKGYVDVST 166 (290)
Q Consensus 147 ~~~~~~~~~-~~~~~lin~s~ 166 (290)
.++.++.| +++.+|||+|-
T Consensus 282 -t~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 282 -NMEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp -CHHHHCCTTCCCCEEEETTC
T ss_pred -CHHHHhcCcCCCeEEEEEec
Confidence 55667889 99999999963
No 311
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.68 E-value=0.00019 Score=62.36 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=72.9
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccch-hhHHhCCCccCCCHHHHhh--c-CCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKC-DPLISLGAKYQPSPDEVAA--S-CDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~-~~~~~~g~~~~~~~~~~~~--~-aDivv~~~p~~~~~~~~~ 145 (290)
..++.|+|+ |++|+.+++.+...|++ .++..+|.+. ++ -.|+..+.+++++.+ . .|++++++|. +.+...+
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v 88 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAV 88 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHH
Confidence 456888898 99999999999988998 4444445432 11 146778889999987 5 9999999986 4445554
Q ss_pred cccccccccCCCCCE-EEEecCC-ChhHHHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKG-YVDVSTV-DGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~-lin~s~~-~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+ .|.- +|..+.+ ...+.+++.+..++.+++++.
T Consensus 89 ---~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 89 ---YEAVD---AGIRLVVVITEGIPVHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp ---HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred ---HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 11222 2322 4444444 444567888888888887664
No 312
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.65 E-value=0.00029 Score=57.67 Aligned_cols=65 Identities=17% Similarity=0.153 Sum_probs=48.7
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc-----CCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY-----QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~-----~~~~~~~~~~aDivv~~~p~ 137 (290)
|||.|.| .|.||+.+++.|.+.|++|.+.+|++++.+.+. .++.. .+...+.+.++|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5799999 599999999999999999999999987655442 22221 11111677889999988754
No 313
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.64 E-value=6.1e-05 Score=66.70 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=47.2
Q ss_pred CeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-------------------CCCccCCCHHHHhhcCCe
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-------------------LGAKYQPSPDEVAASCDV 130 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-------------------~g~~~~~~~~~~~~~aDi 130 (290)
.||||+|+|+||+.+++.|... ++++. +.++++........ .++....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 5899999999999999999874 56664 56666443322221 122222356777789999
Q ss_pred EEEEeCChh
Q 022909 131 TFAMLADPE 139 (290)
Q Consensus 131 vv~~~p~~~ 139 (290)
|+.|+|...
T Consensus 82 V~~atp~~~ 90 (337)
T 1cf2_P 82 VIDCTPEGI 90 (337)
T ss_dssp EEECCSTTH
T ss_pred EEECCCchh
Confidence 999998643
No 314
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.63 E-value=0.00033 Score=57.53 Aligned_cols=66 Identities=20% Similarity=0.248 Sum_probs=49.4
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-CCH----HHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-PSP----DEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-~~~----~~~~~~aDivv~~~p~ 137 (290)
|||.|.|. |.||+.+++.|.+.|++|.+.+|++++...+...++... .|+ .+.+.++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 57999996 999999999999999999999999876654433333211 111 1677899999987754
No 315
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.62 E-value=7.4e-05 Score=56.06 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=74.3
Q ss_pred CCeEEEEcc----cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGM----GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~----G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.++|+|||+ ++.|..+.+.|...|++|+-.++..+.. .|...+.++.++-. .|++++++|. +.+..++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v- 75 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINP-QNQLSEY- 75 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH-
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH-
Confidence 588999997 6799999999999999999988765432 35666677888767 9999999975 5566666
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
++..+ .....+++ +.|. ..+++.+.+++.|++++.
T Consensus 76 --~e~~~-~g~k~v~~--~~G~--~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 76 --NYILS-LKPKRVIF--NPGT--ENEELEEILSENGIEPVI 110 (122)
T ss_dssp --HHHHH-HCCSEEEE--CTTC--CCHHHHHHHHHTTCEEEE
T ss_pred --HHHHh-cCCCEEEE--CCCC--ChHHHHHHHHHcCCeEEC
Confidence 22222 22334444 3332 346888888999999885
No 316
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.62 E-value=0.00016 Score=63.09 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=75.7
Q ss_pred CCeEEEE-cc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhh--cCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFL-GM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAA--SCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~Igii-G~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDivv~~~p~~~~~~~~~~ 146 (290)
.++++|| |+ |++|..+++.+...|++ .+++.+|.+... .-.|+..+.+++|+.+ ..|++++++|. +....++
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~~~- 88 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGGK-THLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAAAI- 88 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH-
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCcc-eECCeeeechHHHhhhcCCCCEEEEecCH-HHHHHHH-
Confidence 6789999 98 99999999999999998 445555543210 1246777789999988 89999999986 4445554
Q ss_pred ccccccccCCCCCEEEEecCCCh-hHHHHHHHHHHHc-CCcEEe
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKAT-GASFLE 188 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~-~~~~~l~~~l~~~-~~~~~~ 188 (290)
++..+. .- ..+++.+.+-. .+..++.+.+++. ++.++.
T Consensus 89 --~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 89 --NEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp --HHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred --HHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 122221 11 24456666543 3455888888888 888764
No 317
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.57 E-value=0.00019 Score=63.56 Aligned_cols=68 Identities=12% Similarity=0.214 Sum_probs=46.7
Q ss_pred CeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhhHHh-CCCc-----------------cCCCHHHHhhcCCeE
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDPLIS-LGAK-----------------YQPSPDEVAASCDVT 131 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~~~~-~g~~-----------------~~~~~~~~~~~aDiv 131 (290)
.||||+|+|+||+.+++.+... ++++. +.|++++....... .++. ...+.+++++++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 5899999999999999999875 35654 66776554332222 2222 223455666789999
Q ss_pred EEEeCChh
Q 022909 132 FAMLADPE 139 (290)
Q Consensus 132 v~~~p~~~ 139 (290)
+.|+|...
T Consensus 82 ~~aTp~~~ 89 (340)
T 1b7g_O 82 VDTTPNGV 89 (340)
T ss_dssp EECCSTTH
T ss_pred EECCCCch
Confidence 99998653
No 318
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.56 E-value=6.3e-05 Score=62.15 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=50.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh------CCCccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS------LGAKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~------~g~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
+|+|.|.| .|.+|+.+++.|.+.|++|++.+|++++...+.. ..+.-.+++.++++++|+||.+...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 58999999 5999999999999999999999999776543211 0111123456678889999987654
No 319
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.54 E-value=0.00012 Score=63.40 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=46.2
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCC--eEEEEeCCccchhh----HHh----CC----CccCCCHHHHhhcCCeEEEEeC
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDP----LIS----LG----AKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~----~~~----~g----~~~~~~~~~~~~~aDivv~~~p 136 (290)
|||+|||+|.+|+.+|-.|...+. ++.++|.++++.+. +.+ .+ +....+. +.+++||+|+++.-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-~~~~~aDvVvitAG 78 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-GGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-HHhCCCCEEEEecC
Confidence 689999999999999999887764 89999998754332 111 11 1122344 46899999999764
No 320
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.53 E-value=0.00036 Score=61.83 Aligned_cols=69 Identities=13% Similarity=0.154 Sum_probs=46.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeCCccchhh---------------------HHhCCCccCCCHHHHhhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNRTKSKCDP---------------------LISLGAKYQPSPDEVAAS 127 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~~~~~~~~---------------------~~~~g~~~~~~~~~~~~~ 127 (290)
+.||||+|+|+||+.+++.+... +++|. +.|++++.... +.+.++....+.++++.+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 36999999999999999999876 46755 44544332221 122233333345566678
Q ss_pred CCeEEEEeCChh
Q 022909 128 CDVTFAMLADPE 139 (290)
Q Consensus 128 aDivv~~~p~~~ 139 (290)
+|+|+.|+|...
T Consensus 82 vDiV~eatg~~~ 93 (343)
T 2yyy_A 82 ADIVVDGAPKKI 93 (343)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEECCCccc
Confidence 999999987643
No 321
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=0.0001 Score=65.71 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=55.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-CeEEEEeCCcc-chhhHHh-CC-------------CccC-CCHHHHhh-cCCeE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-CDVTVWNRTKS-KCDPLIS-LG-------------AKYQ-PSPDEVAA-SCDVT 131 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-~~V~~~d~~~~-~~~~~~~-~g-------------~~~~-~~~~~~~~-~aDiv 131 (290)
++||+|+| +|++|+.+++.|.... ++|....+++. ..+.+.+ .+ +... .+.+++++ ++|+|
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIV 87 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEE
Confidence 47999999 8999999999998764 57765543221 1111211 11 1111 14455556 89999
Q ss_pred EEEeCChhHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 132 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
++|+|... ..... ...++.|..+|+.+..
T Consensus 88 ~~atp~~~-~~~~a------~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 88 FSALPSDL-AKKFE------PEFAKEGKLIFSNASA 116 (354)
T ss_dssp EECCCHHH-HHHHH------HHHHHTTCEEEECCST
T ss_pred EECCCchH-HHHHH------HHHHHCCCEEEECCch
Confidence 99998643 33333 1223467889998754
No 322
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.47 E-value=5.9e-05 Score=64.80 Aligned_cols=66 Identities=17% Similarity=0.036 Sum_probs=50.6
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHC-CCeEEEEeCCccchhhHHhCCCcc-------CCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLISLGAKY-------QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~~g~~~-------~~~~~~~~~~aDivv~~~p~ 137 (290)
|+|.|.| .|.+|+.+++.|... |++|.+.+|++++...+...++.. .++++++++++|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5799999 599999999999987 999999999987765544333321 12456678899999987654
No 323
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.47 E-value=0.00014 Score=64.71 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=56.4
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-----C-eEEEEe-CC-ccc-hhh----HHh-CCCccC-CCHHHHhhcCCeEEEE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-----C-DVTVWN-RT-KSK-CDP----LIS-LGAKYQ-PSPDEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-----~-~V~~~d-~~-~~~-~~~----~~~-~g~~~~-~~~~~~~~~aDivv~~ 134 (290)
++||+|+| +|.+|+.+.+.|..++ . ++.... ++ ..+ ... +.. ..+... .+. +.+.++|+|+.|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEEC
Confidence 37999999 8999999999999876 3 666554 32 212 211 111 112111 133 345689999999
Q ss_pred eCChhHHHHHhcccccccccCCCCCEEEEecCCChh
Q 022909 135 LADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD 170 (290)
Q Consensus 135 ~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~ 170 (290)
+|... .+.+. -.. +.|..+|+.|...-.
T Consensus 88 lg~~~-s~~~~------~~~-~~G~~vIDlSa~~R~ 115 (352)
T 2nqt_A 88 LPHGH-SAVLA------QQL-SPETLIIDCGADFRL 115 (352)
T ss_dssp CTTSC-CHHHH------HHS-CTTSEEEECSSTTTC
T ss_pred CCCcc-hHHHH------HHH-hCCCEEEEECCCccC
Confidence 98754 33333 122 568899999865543
No 324
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.45 E-value=0.00022 Score=62.95 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=49.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCC-------eEEEEeCC----ccchhh----HHhC------CCccCCCHHHHhhcC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGC-------DVTVWNRT----KSKCDP----LISL------GAKYQPSPDEVAASC 128 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~-------~V~~~d~~----~~~~~~----~~~~------g~~~~~~~~~~~~~a 128 (290)
.+||+|+|+ |.+|..++..|...|+ +|.++|++ .++.+. +.+. .+...++..+.++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 579999997 9999999999988875 79999998 433321 2221 112236788899999
Q ss_pred CeEEEEeC
Q 022909 129 DVTFAMLA 136 (290)
Q Consensus 129 Divv~~~p 136 (290)
|+|+++..
T Consensus 85 D~Vi~~ag 92 (329)
T 1b8p_A 85 DVALLVGA 92 (329)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 99998765
No 325
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.44 E-value=0.00015 Score=58.61 Aligned_cols=67 Identities=24% Similarity=0.290 Sum_probs=49.2
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc-------cCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK-------YQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivv~~~p~ 137 (290)
+|+|.|.|. |.||+.+++.|.+.|++|.+.+|++++.......++. ..+++.++++++|+|+.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999997 9999999999999999999999987654322111221 112355667789999887654
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.43 E-value=0.00035 Score=58.01 Aligned_cols=88 Identities=14% Similarity=0.143 Sum_probs=57.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccc-hhhHHhC-CCccC--CCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK-CDPLISL-GAKYQ--PSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~-~~~~~~~-g~~~~--~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
+++|.|||.|.+|..-++.|...|.+|+++++.... ...+.+. ++... .-.++.+.++|+||.++.. +++...+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d-~~~N~~I- 108 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATND-QAVNKFV- 108 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCC-THHHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCC-HHHHHHH-
Confidence 899999999999999999999999999999986532 2333332 23211 1123456789999877644 4554444
Q ss_pred ccccccccCCCCCEEEEecC
Q 022909 147 GKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~ 166 (290)
....+ ..++||+..
T Consensus 109 -----~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 109 -----KQHIK-NDQLVNMAS 122 (223)
T ss_dssp -----HHHSC-TTCEEEC--
T ss_pred -----HHHHh-CCCEEEEeC
Confidence 12223 456777743
No 327
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.42 E-value=0.00013 Score=65.21 Aligned_cols=83 Identities=11% Similarity=0.067 Sum_probs=52.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC----CeEE-EEeCCccchhhHHhC--CCccCCCHHHHhhcC---------------
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG----CDVT-VWNRTKSKCDPLISL--GAKYQPSPDEVAASC--------------- 128 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g----~~V~-~~d~~~~~~~~~~~~--g~~~~~~~~~~~~~a--------------- 128 (290)
..+|||||+|.||+.+++.+.... .+|. ++|++.. .+.+. |+..+++.++++++.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~---~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~ 80 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS---LISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLK 80 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE---EECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHT
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh---hhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhh
Confidence 478999999999999999998853 4553 5665432 12222 454445666666543
Q ss_pred -----CeEEEEeCChhHHHHHhcccccccccCCCCCEEEE
Q 022909 129 -----DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD 163 (290)
Q Consensus 129 -----Divv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin 163 (290)
|+|+.|+|....... ....++.|+.+|-
T Consensus 81 ~~~~~DvVV~~t~~~~~a~~-------~~~AL~aGkhVVt 113 (358)
T 1ebf_A 81 TSPKPVILVDNTSSAYIAGF-------YTKFVENGISIAT 113 (358)
T ss_dssp TCSSCEEEEECSCCHHHHTT-------HHHHHHTTCEEEC
T ss_pred hccCCcEEEEcCCChHHHHH-------HHHHHHCCCeEEe
Confidence 678888776433222 2345677777764
No 328
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.40 E-value=7.5e-05 Score=66.22 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=51.1
Q ss_pred CCCCeEEEEc-ccHhHHHHHHHHHHCCC---eEEEE-eCCc-cchhhHHhCCCccCC-CHHHHhhcCCeEEEEeCChhHH
Q 022909 69 ELPGRIGFLG-MGIMGTPMAQNLLKAGC---DVTVW-NRTK-SKCDPLISLGAKYQP-SPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 69 ~~~~~IgiiG-~G~iG~~la~~l~~~g~---~V~~~-d~~~-~~~~~~~~~g~~~~~-~~~~~~~~aDivv~~~p~~~~~ 141 (290)
+|.+||+|+| +|.+|+.+.+.|...++ ++... +++. .+...+....+...+ +.+ .++++|+|+.|+|... .
T Consensus 4 ~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~-~~~~~DvV~~a~g~~~-s 81 (340)
T 2hjs_A 4 SQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSF-DFSSVGLAFFAAAAEV-S 81 (340)
T ss_dssp -CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGC-CGGGCSEEEECSCHHH-H
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHH-HhcCCCEEEEcCCcHH-H
Confidence 3457999999 89999999999985544 44444 4332 111011110111110 122 2568999999997543 2
Q ss_pred HHHhcccccccccCCCCCEEEEecCC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
.... -..++.|..+|+.|..
T Consensus 82 ~~~a------~~~~~aG~kvId~Sa~ 101 (340)
T 2hjs_A 82 RAHA------ERARAAGCSVIDLSGA 101 (340)
T ss_dssp HHHH------HHHHHTTCEEEETTCT
T ss_pred HHHH------HHHHHCCCEEEEeCCC
Confidence 3332 1223457778887643
No 329
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.39 E-value=0.0007 Score=59.16 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=46.7
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHC-C--CeEEEEeCCccchh----hHHhCCC--ccC----CCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKA-G--CDVTVWNRTKSKCD----PLISLGA--KYQ----PSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~-g--~~V~~~d~~~~~~~----~~~~~g~--~~~----~~~~~~~~~aDivv~~~p~ 137 (290)
|||+||| +|.+|..++..|... + .++.++|+++ +.+ ++.+... ... ++..+.++++|+|+++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence 5899999 899999999999764 4 5899999986 222 2222211 111 2456778999999998754
Q ss_pred h
Q 022909 138 P 138 (290)
Q Consensus 138 ~ 138 (290)
+
T Consensus 80 ~ 80 (312)
T 3hhp_A 80 A 80 (312)
T ss_dssp S
T ss_pred C
Confidence 3
No 330
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.39 E-value=7e-05 Score=63.55 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=31.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~ 104 (290)
..+|.|+|+|.+|..+++.|...|. +++++|++.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 7899999999999999999999997 788998764
No 331
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.37 E-value=0.00035 Score=61.74 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=25.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEE-EEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVT-VWNR 102 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~-~~d~ 102 (290)
+.||||+|+|+||+.+++.+... +.+|. +.|+
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~ 36 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDP 36 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECS
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCC
Confidence 46999999999999999998764 56765 4453
No 332
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.36 E-value=0.00018 Score=61.66 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=47.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH---hCCCccCCCHHHHhhc-CCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI---SLGAKYQPSPDEVAAS-CDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~---~~g~~~~~~~~~~~~~-aDivv~~~p 136 (290)
+|+|.|.|+|.||+.+++.|.+.|++|++.+|++++...-. ...+.-..+++++++. +|+||.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 58999999999999999999999999999999876532100 0112112334556666 999887653
No 333
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.36 E-value=4e-05 Score=63.23 Aligned_cols=67 Identities=9% Similarity=0.116 Sum_probs=47.1
Q ss_pred CCeEEEEcccHhHHHHHHHH--HHCCCeE-EEEeCCccchhhHHh-CCCccCCCHHHHhh-cCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNL--LKAGCDV-TVWNRTKSKCDPLIS-LGAKYQPSPDEVAA-SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l--~~~g~~V-~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~-~aDivv~~~p~~ 138 (290)
.++|+|||+|++|+.+++.+ .. |+++ .++|.++++...... ..+...++++++++ +.|+|++|+|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 47899999999999999962 23 6764 577888876543221 12333567788776 488899888764
No 334
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.35 E-value=0.00049 Score=63.37 Aligned_cols=114 Identities=18% Similarity=0.085 Sum_probs=69.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCcc----chhhHHhCCCccC--CCHHHHhhc-CCeEEEEe--CC-hhH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKS----KCDPLISLGAKYQ--PSPDEVAAS-CDVTFAML--AD-PES 140 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~----~~~~~~~~g~~~~--~~~~~~~~~-aDivv~~~--p~-~~~ 140 (290)
+++|.|||.|..|.+.|+.|...|++|.++|.++. ..+.+++.|+... .+.++++.+ +|+||+.. |. ++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTTSHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCCChh
Confidence 78999999999999999999999999999998653 2345566676543 233455666 89998863 22 222
Q ss_pred HHHHhc------ccccccccCCCCCEEEEec-CCChhHHHHHHHHHHHcCC
Q 022909 141 AMDVAC------GKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGA 184 (290)
Q Consensus 141 ~~~~~~------~~~~~~~~~~~~~~lin~s-~~~~~~~~~l~~~l~~~~~ 184 (290)
...... ...+++..+.+..++--++ .|+..+..-+...|+..+.
T Consensus 89 ~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 89 VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp HHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 222210 0012222223344443333 4445555556666776654
No 335
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.34 E-value=0.00025 Score=63.15 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=53.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-CeEEEEe-CCccchhhHHh-C-------------CCccCC-CHHHHhhcCCeEE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-CDVTVWN-RTKSKCDPLIS-L-------------GAKYQP-SPDEVAASCDVTF 132 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-~~V~~~d-~~~~~~~~~~~-~-------------g~~~~~-~~~~~~~~aDivv 132 (290)
++||+|+| +|.+|+.+.+.|.... .++.... .+....+.+.+ + .+...+ +.++ ++++|+|+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf 82 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVL 82 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEE
Confidence 57999999 8999999999998754 4666553 22111111211 1 122211 3334 47899999
Q ss_pred EEeCChhHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 133 AMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 133 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
+|+|.... .... ...++.|..+|+.|..
T Consensus 83 ~atp~~~s-~~~a------~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 83 SALPNELA-ESIE------LELVKNGKIVVSNASP 110 (350)
T ss_dssp ECCCHHHH-HHHH------HHHHHTTCEEEECSST
T ss_pred ECCChHHH-HHHH------HHHHHCCCEEEECCcc
Confidence 99976433 3332 2234567778888753
No 336
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.33 E-value=0.00034 Score=62.04 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=68.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-CCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-PSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+.+++.+..|+|+-++..+......
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~----- 251 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDY----- 251 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHH-----
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHH-----
Confidence 789999999999999999999999999999999998888877775422 33344334689999888764344433
Q ss_pred cccccCCCCCEEEEecCCC
Q 022909 150 GAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~~~ 168 (290)
++.++++..++.++...
T Consensus 252 --~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 252 --LKLLTYNGDLALVGLPP 268 (348)
T ss_dssp --HTTEEEEEEEEECCCCC
T ss_pred --HHHHhcCCEEEEECCCC
Confidence 45677888888776443
No 337
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.32 E-value=0.0008 Score=58.58 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=46.3
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCC--eEEEEeC--Cccchhh----HHhC-----CCccCCCHHHHhhcCCeEEEEeCC
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGC--DVTVWNR--TKSKCDP----LISL-----GAKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~--~V~~~d~--~~~~~~~----~~~~-----g~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
|||+|+| +|.+|..++..|...|. ++.++|+ ++++.+. +.+. .+....+..+.++++|+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 5899999 99999999999988775 6889999 6644322 1111 111111225678999999998763
No 338
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.32 E-value=0.00012 Score=67.64 Aligned_cols=68 Identities=22% Similarity=0.326 Sum_probs=52.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-CCCcc----CCC---HHHH-hhcCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-LGAKY----QPS---PDEV-AASCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-~g~~~----~~~---~~~~-~~~aDivv~~~p~~ 138 (290)
.|+|-|+|+|++|+.+|+.|...|++|++.|+++++.+.+.+ .++.. .++ ++++ ++++|+++.+++.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 589999999999999999999999999999999998887765 34432 122 2222 45799988776653
No 339
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.32 E-value=0.0016 Score=58.25 Aligned_cols=89 Identities=15% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+.++..
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 272 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN 272 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCC
Confidence 6899999999999999999999998 79999999988887777765321 12333333 37999988865
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s~ 166 (290)
+...... ++.++++ ..++.++.
T Consensus 273 ~~~~~~~-------~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 273 VGVMRNA-------LESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHHHHH-------HHTBCTTTCEEEECSC
T ss_pred HHHHHHH-------HHHhhcCCcEEEEEcC
Confidence 4433332 4567777 77777654
No 340
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.31 E-value=0.00053 Score=61.32 Aligned_cols=93 Identities=18% Similarity=0.132 Sum_probs=68.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc-------cchhhHHh------CCCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK-------SKCDPLIS------LGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~-------~~~~~~~~------~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
..||.|+|.|..|..+++.+...|. +|+++|++. ++...+++ .......+++|+++++|++|=+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S- 266 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS- 266 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-
Confidence 6899999999999999999999999 999999973 22222221 11112457999999999987553
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecCCChh
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD 170 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~ 170 (290)
. .+++ .++.++.|+++.+|+.+|+-.+.
T Consensus 267 a----pgl~--T~EmVk~Ma~~pIIfalsNPt~E 294 (398)
T 2a9f_A 267 A----PGVL--KAEWISKMAARPVIFAMANPIPE 294 (398)
T ss_dssp S----TTCC--CHHHHHTSCSSCEEEECCSSSCS
T ss_pred C----CCCC--CHHHHHhhCCCCEEEECCCCCcc
Confidence 2 2455 45667889999999999987653
No 341
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.31 E-value=0.0013 Score=58.82 Aligned_cols=89 Identities=20% Similarity=0.147 Sum_probs=64.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+-++..
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~ 271 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR 271 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC
Confidence 6899999999999999999999998 79999999988887777775421 12333332 47999988865
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s~ 166 (290)
+...... ++.++++ ..++.++.
T Consensus 272 ~~~~~~~-------~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 272 IETMMNA-------LQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHHHHHH-------HHTBCTTTCEEEECCC
T ss_pred HHHHHHH-------HHHHhcCCCEEEEEcc
Confidence 4433332 4567777 77776653
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.30 E-value=0.0013 Score=58.81 Aligned_cols=88 Identities=18% Similarity=0.188 Sum_probs=63.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+.++..
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 271 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR 271 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCC
Confidence 6899999999999999999999998 79999999988887777665321 12333332 36888888765
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEec
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVS 165 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s 165 (290)
+...... ++.++++ ..++.++
T Consensus 272 ~~~~~~~-------~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 272 LDTMVTA-------LSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHHHHH-------HHHBCTTTCEEEECS
T ss_pred HHHHHHH-------HHHhhcCCcEEEEec
Confidence 4333332 4556776 6676665
No 343
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.29 E-value=0.0014 Score=58.54 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=64.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+-++..
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~ 275 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 275 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCC
Confidence 6899999999999999999999998 89999999988887777765421 12333332 47999888765
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s~ 166 (290)
+...... ++.++++ ..++.++.
T Consensus 276 ~~~~~~~-------~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 276 AQTLKAA-------VDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHHH-------HHTBCTTTCEEEECCC
T ss_pred HHHHHHH-------HHHhhcCCCEEEEECC
Confidence 4333332 4566777 77776653
No 344
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.29 E-value=0.00049 Score=60.54 Aligned_cols=64 Identities=19% Similarity=0.134 Sum_probs=49.7
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHCCCeEEEEeCCcc--chhhHHhCCCccC--CCHHHHh-hcCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKAGCDVTVWNRTKS--KCDPLISLGAKYQ--PSPDEVA-ASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~g~~V~~~d~~~~--~~~~~~~~g~~~~--~~~~~~~-~~aDivv~~ 134 (290)
.++|.|||.|.+|.+ +|+.|...|++|.++|.++. ..+.+++.|+... .+.+++. .++|+||..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEEC
Confidence 589999999999995 99999999999999998753 3345666776543 3445554 479999875
No 345
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.29 E-value=0.00017 Score=63.68 Aligned_cols=86 Identities=6% Similarity=0.071 Sum_probs=60.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC----CCH---HHH-hhcCCeEEEEeCChhHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ----PSP---DEV-AASCDVTFAMLADPESAM 142 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~----~~~---~~~-~~~aDivv~~~p~~~~~~ 142 (290)
.++|.|+|+|++|+.+++.|...|+ |.+.|+++++.+ +.+.+.... .+. +++ ++++|.|+++++.+....
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 4689999999999999999999999 999999998887 766554321 222 223 567899999987654433
Q ss_pred HHhcccccccccCCCCCEEE
Q 022909 143 DVACGKHGAASGMGPGKGYV 162 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~li 162 (290)
... ...+.+.++..++
T Consensus 193 ~~~----~~ar~~~~~~~ii 208 (336)
T 1lnq_A 193 HCI----LGIRKIDESVRII 208 (336)
T ss_dssp HHH----HHHHTTCTTSEEE
T ss_pred HHH----HHHHHHCCCCeEE
Confidence 332 2244555654443
No 346
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=97.27 E-value=0.00044 Score=59.59 Aligned_cols=66 Identities=26% Similarity=0.261 Sum_probs=49.6
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCC-CeEEEEeCCccch--hhHHhCCCcc-------CCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAG-CDVTVWNRTKSKC--DPLISLGAKY-------QPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g-~~V~~~d~~~~~~--~~~~~~g~~~-------~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.|. |.+|+.+++.|.+.| ++|.+.+|++++. ..+...++.. .+++.++++++|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 589999996 999999999999988 9999999987653 2233333322 1235567888999998764
No 347
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.27 E-value=0.00022 Score=63.76 Aligned_cols=89 Identities=18% Similarity=0.221 Sum_probs=62.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-hCCCccC---CCHH---HHhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-SLGAKYQ---PSPD---EVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-~~g~~~~---~~~~---~~~~~aDivv~~~p~~~~~~~ 143 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+. +.|...+ .+.+ ++....|+|+.++..+..+..
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~ 267 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLP 267 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHHHH
Confidence 78999999999999999999999999999999988877665 5554321 1222 222357888888765333332
Q ss_pred HhcccccccccCCCCCEEEEecC
Q 022909 144 VACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
. ++.++++..+++++.
T Consensus 268 ~-------~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 268 L-------FGLLKSHGKLILVGA 283 (366)
T ss_dssp H-------HHHEEEEEEEEECCC
T ss_pred H-------HHHHhcCCEEEEEcc
Confidence 2 344566667777754
No 348
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=97.27 E-value=0.00022 Score=63.38 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=48.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccch--hhHHhC-CCc--cCC------CHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKC--DPLISL-GAK--YQP------SPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~--~~~~~~-g~~--~~~------~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| .|.+|+.+++.|...|++|.+.+|++++. +.+.+. ++. ..+ ++.++++++|+|+.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence 58899999 59999999999999999999999987654 233321 221 111 25566788999987654
No 349
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.26 E-value=0.0013 Score=59.03 Aligned_cols=89 Identities=17% Similarity=0.229 Sum_probs=64.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+-++..
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 6899999999999999999999998 89999999988887777775421 22333332 37888888866
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s~ 166 (290)
+...... ++.++++ ..++.++.
T Consensus 274 ~~~~~~~-------~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 274 VSVMRAA-------LECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHHHH-------HHTBCTTTCEEEECSC
T ss_pred HHHHHHH-------HHHhhccCCEEEEEcc
Confidence 4443333 4566775 66766653
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.26 E-value=0.00043 Score=61.35 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=62.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-----CCHHHHhh------cCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA------SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDivv~~~p~~ 138 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+.++..+
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~ 247 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP 247 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCH
Confidence 7899999999999999999999999 99999999887776666554311 12322222 468888887654
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
...... ++.++++..++.++.
T Consensus 248 ~~~~~~-------~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 248 KALEQG-------LQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHHHHH-------HHHEEEEEEEEECCC
T ss_pred HHHHHH-------HHHHhcCCEEEEEcc
Confidence 433333 344566667776654
No 351
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.24 E-value=0.0002 Score=63.95 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=54.1
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCC-CeEE-EEeCCc--cchhhH-------------HhCCCccCCCHHHHhhcCCeE
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAG-CDVT-VWNRTK--SKCDPL-------------ISLGAKYQPSPDEVAASCDVT 131 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g-~~V~-~~d~~~--~~~~~~-------------~~~g~~~~~~~~~~~~~aDiv 131 (290)
++.||+||| .|.+|+.+.+.|..+. .++. +.+++. ++.... .+..+... +.+ .++++|+|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~-~~~~vDvv 83 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK-LMDDVDII 83 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG-GCTTCCEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH-HhcCCCEE
Confidence 357899999 6999999999987764 3554 334432 112111 11111111 223 35789999
Q ss_pred EEEeCChhHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 132 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
+.|+|.... +... -..++.|..+||.|..
T Consensus 84 f~a~p~~~s-~~~a------~~~~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 84 FSPLPQGAA-GPVE------EQFAKEGFPVISNSPD 112 (359)
T ss_dssp EECCCTTTH-HHHH------HHHHHTTCEEEECSST
T ss_pred EECCChHHH-HHHH------HHHHHCCCEEEEcCCC
Confidence 999987443 3333 1224568889999754
No 352
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.24 E-value=0.0002 Score=63.95 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=54.2
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCC-CeEE-EEeCCc--cchhhH-------------HhCCCccCCCHHHHhhcCCeE
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAG-CDVT-VWNRTK--SKCDPL-------------ISLGAKYQPSPDEVAASCDVT 131 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g-~~V~-~~d~~~--~~~~~~-------------~~~g~~~~~~~~~~~~~aDiv 131 (290)
++.||+||| .|.+|+.+.+.|..+. .++. +.+++. ++.... .+..+... +.+ .++++|+|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~-~~~~vDvv 83 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK-LMDDVDII 83 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG-GCTTCCEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH-HhcCCCEE
Confidence 357899999 6999999999987764 3554 334432 112111 11111111 223 35789999
Q ss_pred EEEeCChhHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 132 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
+.|+|.... +... -..++.|..+||.|..
T Consensus 84 f~a~p~~~s-~~~a------~~~~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 84 FSPLPQGAA-GPVE------EQFAKEGFPVISNSPD 112 (359)
T ss_dssp EECCCTTTH-HHHH------HHHHHTTCEEEECSST
T ss_pred EECCChHHH-HHHH------HHHHHCCCEEEEcCCC
Confidence 999987443 3333 1224578899999854
No 353
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.23 E-value=0.00048 Score=62.82 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=71.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC---eEEEEe----CC--ccchhh---HH-------h-CCCc-cCCCHHHHhhcCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC---DVTVWN----RT--KSKCDP---LI-------S-LGAK-YQPSPDEVAASCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~---~V~~~d----~~--~~~~~~---~~-------~-~g~~-~~~~~~~~~~~aD 129 (290)
+++|.|+|+|..|++++..|...|. +|+++| |+ ..+.+. +. . .+.. ...++.+.++++|
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aD 265 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDAD 265 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCC
Confidence 6899999999999999999999998 799999 76 222111 21 1 0111 2346888999999
Q ss_pred eEEEEeCCh--hHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 130 VTFAMLADP--ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 130 ivv~~~p~~--~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
++|-++|.+ ..++. ..+.|.++.++++++.-. .+ .+.+..++.|...+
T Consensus 266 VlInaT~~~~G~~~~e-------~v~~m~~~~iVfDLynP~--~t-~~~~~A~~~G~~iv 315 (439)
T 2dvm_A 266 VLISFTRPGPGVIKPQ-------WIEKMNEDAIVFPLANPV--PE-ILPEEAKKAGARIV 315 (439)
T ss_dssp EEEECSCCCSSSSCHH-------HHTTSCTTCEEEECCSSS--CS-SCHHHHHHHTCSEE
T ss_pred EEEEcCCCccCCCChH-------HHHhcCCCCEEEECCCCC--Cc-chHHHHHHcCCeEE
Confidence 999999862 21122 245678889999994432 22 23333444466666
No 354
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.23 E-value=0.0002 Score=58.91 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=49.0
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----CCCcc-CCCHHHHhhcCCeEEEEeCCh
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----LGAKY-QPSPDEVAASCDVTFAMLADP 138 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----~g~~~-~~~~~~~~~~aDivv~~~p~~ 138 (290)
|+|.|.| .|.||+.+++.|.+.|++|++.+|++++.+.... ..+.. .+++.+++++.|+||.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4799999 7999999999999999999999999865443211 11111 123455677899999887643
No 355
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.23 E-value=0.00027 Score=62.43 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=56.6
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC-CCeEEEEeCCc---cchhhHHh-----C---CCccCC--CHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA-GCDVTVWNRTK---SKCDPLIS-----L---GAKYQP--SPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~-g~~V~~~d~~~---~~~~~~~~-----~---g~~~~~--~~~~~~~~aDivv~~~ 135 (290)
++||+|+| .|.+|+.+.+.|..+ .+++.....+. ..-+.+.+ . .....+ +.+++.+++|+|++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~ 83 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLAT 83 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECS
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECC
Confidence 37999999 699999999999884 45766543222 21122221 1 122221 3455548999999999
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecCCC
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~ 168 (290)
|... .+... -..++.|..+||.|...
T Consensus 84 p~~~-s~~~~------~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 84 AHEV-SHDLA------PQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp CHHH-HHHHH------HHHHHTTCEEEECSSTT
T ss_pred ChHH-HHHHH------HHHHHCCCEEEEcCCcc
Confidence 8633 33333 12245788999998653
No 356
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.22 E-value=0.00051 Score=59.76 Aligned_cols=68 Identities=31% Similarity=0.397 Sum_probs=50.2
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCcc-chhh---HHhCCCcc-------CCCHHHHhhcCCeEEEEeCC
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKS-KCDP---LISLGAKY-------QPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~-~~~~---~~~~g~~~-------~~~~~~~~~~aDivv~~~p~ 137 (290)
|+++|.|.| .|.+|+.+++.|.+.|++|.+.+|++. +... +...++.. .+++.++++++|+||.+.+.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 346899999 499999999999999999999999875 3222 22334432 12456678889999987753
No 357
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.21 E-value=0.0015 Score=58.43 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=64.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+.++..
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~ 270 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGN 270 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCc
Confidence 6899999999999999999999998 79999999988877777665321 12333332 47999888865
Q ss_pred hhHHHHHhcccccccccCCCC-CEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPG-KGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~lin~s~ 166 (290)
+...... ++.++++ ..++.++.
T Consensus 271 ~~~~~~~-------~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 271 VKVMRAA-------LEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHHHHHH-------HHTBCTTTCEEEECSC
T ss_pred HHHHHHH-------HHhhccCCcEEEEEec
Confidence 4433332 4567777 77777653
No 358
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.19 E-value=0.0016 Score=57.77 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=64.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC------CC-HHHH---h-----hcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ------PS-PDEV---A-----ASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~------~~-~~~~---~-----~~aDivv~~~ 135 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+ .+++ . ...|+|+.++
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCS 248 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECC
Confidence 689999999999999999999999999999999888777777665321 12 2222 2 2489999888
Q ss_pred CChhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 136 ADPESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 136 p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
......... ++.++++..++.++.
T Consensus 249 g~~~~~~~~-------~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 249 GNEKCITIG-------INITRTGGTLMLVGM 272 (352)
T ss_dssp CCHHHHHHH-------HHHSCTTCEEEECSC
T ss_pred CCHHHHHHH-------HHHHhcCCEEEEEec
Confidence 654333332 456778888877754
No 359
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.19 E-value=0.001 Score=57.32 Aligned_cols=73 Identities=23% Similarity=0.333 Sum_probs=59.8
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcccc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGKH 149 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~~ 149 (290)
++++.|||- .-+|+.++..|...+..|+++.... .++.+..+++||||.++..+. ++ .
T Consensus 179 Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G~p~----~i--~- 237 (303)
T 4b4u_A 179 GKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVGKAE----LI--Q- 237 (303)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSCSTT----CB--C-
T ss_pred CCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccCCCC----cc--c-
Confidence 899999995 6679999999999999999886532 367788999999999987643 34 1
Q ss_pred cccccCCCCCEEEEecC
Q 022909 150 GAASGMGPGKGYVDVST 166 (290)
Q Consensus 150 ~~~~~~~~~~~lin~s~ 166 (290)
.+++|+|+++||++-
T Consensus 238 --~d~vk~GavVIDVGi 252 (303)
T 4b4u_A 238 --KDWIKQGAVVVDAGF 252 (303)
T ss_dssp --GGGSCTTCEEEECCC
T ss_pred --cccccCCCEEEEece
Confidence 467899999999964
No 360
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.18 E-value=0.00058 Score=60.29 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=63.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHh----hcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVA----ASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~----~~aDivv~~~p~~~~~ 141 (290)
+++|.|+|.|.+|...++.++..|.+|++.++++++.+.+++.|.... .++.+.+ ...|+|+.++..+...
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 244 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAF 244 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHHH
Confidence 689999999999999999999999999999999888777776665321 1222222 3478888887654433
Q ss_pred HHHhcccccccccCCCCCEEEEecC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
... ++.++++..++.++.
T Consensus 245 ~~~-------~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 245 QSA-------YNSIRRGGACVLVGL 262 (339)
T ss_dssp HHH-------HHHEEEEEEEEECCC
T ss_pred HHH-------HHHhhcCCEEEEecc
Confidence 333 345566667776654
No 361
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.18 E-value=0.00013 Score=60.06 Aligned_cols=67 Identities=6% Similarity=0.095 Sum_probs=46.2
Q ss_pred CCeEEEEcccHhHHHHHHHH--HHCCCeE-EEEeCCcc-chhh-HHhCCCc--cCCCHHHHhhc--CCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNL--LKAGCDV-TVWNRTKS-KCDP-LISLGAK--YQPSPDEVAAS--CDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l--~~~g~~V-~~~d~~~~-~~~~-~~~~g~~--~~~~~~~~~~~--aDivv~~~p~~ 138 (290)
..+++|+|+|++|+++++.+ ...|+++ .++|.+++ +... .. .|+. ..+++++++++ .|++++|+|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 47899999999999999984 3456765 47798887 5433 11 2333 34567777764 78888888763
No 362
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.18 E-value=0.00047 Score=59.76 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=47.4
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-----CCCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-----LGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-----~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| .|.+|+.+++.|.+.|++|++.+|++...+ +.. ..+. .+++.++++++|+||.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 58999999 699999999999999999999999854433 221 1223 3456677889999987754
No 363
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.17 E-value=0.00012 Score=67.80 Aligned_cols=64 Identities=13% Similarity=0.210 Sum_probs=44.7
Q ss_pred CeEEEEcccHhHHH--HHHHHHHC------CCeEEEEeCCccchhhHHh--------CC----CccCCCHHHHhhcCCeE
Q 022909 72 GRIGFLGMGIMGTP--MAQNLLKA------GCDVTVWNRTKSKCDPLIS--------LG----AKYQPSPDEVAASCDVT 131 (290)
Q Consensus 72 ~~IgiiG~G~iG~~--la~~l~~~------g~~V~~~d~~~~~~~~~~~--------~g----~~~~~~~~~~~~~aDiv 131 (290)
+||+|||.|.+|.. +...+... +.+|.++|.++++.+.... .+ +..+++.++++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 58999999998854 33333321 2479999999877543211 12 34467899999999999
Q ss_pred EEEe
Q 022909 132 FAML 135 (290)
Q Consensus 132 v~~~ 135 (290)
+++.
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9885
No 364
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.16 E-value=0.00053 Score=59.31 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh-------CCCccCCCHHHHhh--cCCeEEEEeCCh--
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS-------LGAKYQPSPDEVAA--SCDVTFAMLADP-- 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~-------~g~~~~~~~~~~~~--~aDivv~~~p~~-- 138 (290)
..+|.|||+|.+|..+++.|+..|. ++.++|.+.-....+.. .|...+....+.++ +.++-+...+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT 115 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence 6899999999999999999999997 89999986522221111 11111112222222 345555555432
Q ss_pred --hHHHHHhcc-cccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCC
Q 022909 139 --ESAMDVACG-KHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193 (290)
Q Consensus 139 --~~~~~~~~~-~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~ 193 (290)
.....++.. ....+...++-.++||++- ....-..+.++..+.++.++...+.+
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-n~~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVD-NFEARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-SHHHHHHHHHHHHHHTCCEEEEEECT
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCc-chhhhhHHHHHHHHhCCCEEEeeeec
Confidence 122222200 0000011134457787743 33344456667777788887755543
No 365
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.16 E-value=0.00043 Score=63.54 Aligned_cols=99 Identities=19% Similarity=0.278 Sum_probs=61.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CC---eEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GC---DVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVAC 146 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~---~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~ 146 (290)
.+||.|||+|.||+.++..+... ++ +|++.|+..... ++.+.. ...++...+ ........+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~------------~~~~~~-g~~~~~~~V-dadnv~~~l- 77 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV------------DVAQQY-GVSFKLQQI-TPQNYLEVI- 77 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC------------CHHHHH-TCEEEECCC-CTTTHHHHT-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh------------hHHhhc-CCceeEEec-cchhHHHHH-
Confidence 58899999999999999999874 45 788888765432 112222 123333333 223333433
Q ss_pred ccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCcc
Q 022909 147 GKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 191 (290)
Q Consensus 147 ~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~ 191 (290)
+ +.++++.++||++ .+.....+.+++.+.|++|++..+
T Consensus 78 --~---aLl~~~DvVIN~s--~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 78 --G---STLEENDFLIDVS--IGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp --G---GGCCTTCEEEECC--SSSCHHHHHHHHHHHTCEEEESSC
T ss_pred --H---HHhcCCCEEEECC--ccccCHHHHHHHHHcCCCEEECCC
Confidence 1 2234457888864 334455677777788899999654
No 366
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=97.16 E-value=0.00062 Score=58.75 Aligned_cols=67 Identities=22% Similarity=0.333 Sum_probs=48.8
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccc------hh---hHHhCCCcc-------CCCHHHHhhcCCeEEE
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSK------CD---PLISLGAKY-------QPSPDEVAASCDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~------~~---~~~~~g~~~-------~~~~~~~~~~aDivv~ 133 (290)
+++|.|.|. |.+|+.+++.|.+.|++|.+.+|++.. .+ .+...++.. .+++.++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 578999995 999999999999999999999997532 11 112234322 1235667788999998
Q ss_pred EeCC
Q 022909 134 MLAD 137 (290)
Q Consensus 134 ~~p~ 137 (290)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 8754
No 367
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.16 E-value=0.00014 Score=64.41 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=52.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC---CeEEEEe-CC-ccchhhHHhCCCccCCCH-HHHhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG---CDVTVWN-RT-KSKCDPLISLGAKYQPSP-DEVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g---~~V~~~d-~~-~~~~~~~~~~g~~~~~~~-~~~~~~aDivv~~~p~~~~~~~ 143 (290)
++||+|+| +|.+|+.+.+.|...+ +++.... ++ ..+.-.+....+... +. .+.++++|+|+.|+|... ...
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~-~~~~~~~~~vDvVf~a~g~~~-s~~ 80 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQ-NVEEFDWSQVHIALFSAGGEL-SAK 80 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEE-EGGGCCGGGCSEEEECSCHHH-HHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEe-cCChHHhcCCCEEEECCCchH-HHH
Confidence 47999999 9999999999998873 4555544 32 211111111111111 11 123468999999997643 333
Q ss_pred HhcccccccccCCCCCEEEEecCC
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
.. -..++.|..+|+.|..
T Consensus 81 ~a------~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 81 WA------PIAAEAGVVVIDNTSH 98 (336)
T ss_dssp HH------HHHHHTTCEEEECSST
T ss_pred HH------HHHHHcCCEEEEcCCc
Confidence 32 1234567888988754
No 368
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.0017 Score=57.48 Aligned_cols=90 Identities=12% Similarity=0.046 Sum_probs=64.7
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc------CCCHHHHhh-----cCCeEEEEeCCh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY------QPSPDEVAA-----SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~------~~~~~~~~~-----~aDivv~~~p~~ 138 (290)
+++|.|+|. |.+|..+++.++..|.+|++.++++++.+.+++.|... ..++.+.+. ..|+|+.++..+
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~ 249 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSE 249 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcH
Confidence 689999998 99999999999999999999999988776666655421 123444443 378888887654
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
...... ++.++++..+++++..
T Consensus 250 ~~~~~~-------~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 250 AAIEAS-------TRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHHHHH-------TTSEEEEEEEEECCCC
T ss_pred HHHHHH-------HHHHhcCCEEEEEeCC
Confidence 433332 4566777777777643
No 369
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.12 E-value=0.0014 Score=58.23 Aligned_cols=89 Identities=19% Similarity=0.181 Sum_probs=64.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-C-C---HHHH---h-----hcCCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-P-S---PDEV---A-----ASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-~-~---~~~~---~-----~~aDivv~~~p 136 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ + + .++. + ...|+|+.++.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 251 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG 251 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCC
Confidence 6899999999999999999999999 89999999888777777765321 1 1 1221 1 24899999886
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.+...... ++.++++..++.++.
T Consensus 252 ~~~~~~~~-------~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 252 AEASIQAG-------IYATRSGGTLVLVGL 274 (356)
T ss_dssp CHHHHHHH-------HHHSCTTCEEEECSC
T ss_pred ChHHHHHH-------HHHhcCCCEEEEEec
Confidence 64333332 456788888887764
No 370
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.12 E-value=0.00054 Score=61.30 Aligned_cols=90 Identities=18% Similarity=0.226 Sum_probs=65.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC---CCH---HHHhhcCCeEEEEeCChhHHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ---PSP---DEVAASCDVTFAMLADPESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~---~~~---~~~~~~aDivv~~~p~~~~~~~~ 144 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+. +++....|+|+.++..+......
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~ 274 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDF 274 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHHH
Confidence 689999999999999999999999999999999988877777665321 121 12223579999888654333333
Q ss_pred hcccccccccCCCCCEEEEecCC
Q 022909 145 ACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
++.++++..++.++..
T Consensus 275 -------~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 275 -------TTLLKRDGTMTLVGAP 290 (369)
T ss_dssp -------HTTEEEEEEEEECCCC
T ss_pred -------HHHhccCCEEEEeccC
Confidence 4556777777777543
No 371
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=97.12 E-value=0.0005 Score=59.33 Aligned_cols=41 Identities=22% Similarity=0.251 Sum_probs=36.4
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
++++.|+| .|.+|+++++.|...|.+|++++|++++.+.+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~ 160 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA 160 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH
Confidence 78999999 999999999999999999999999977655443
No 372
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.11 E-value=0.00016 Score=64.59 Aligned_cols=89 Identities=12% Similarity=0.152 Sum_probs=52.6
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC---eEEEEe-CC-ccchhhHHhCCCccC-CCHHHHhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC---DVTVWN-RT-KSKCDPLISLGAKYQ-PSPDEVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~---~V~~~d-~~-~~~~~~~~~~g~~~~-~~~~~~~~~aDivv~~~p~~~~~~~ 143 (290)
++||+||| .|.+|+.+.+.|...++ ++.... ++ ..+.-.+........ .+. +.++++|+|+.|+|.. ..+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~-~~~~~~Dvvf~a~~~~-~s~~ 79 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE-TAFEGVDIALFSAGSS-TSAK 79 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCT-TTTTTCSEEEECSCHH-HHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCH-HHhcCCCEEEECCChH-hHHH
Confidence 57999999 79999999999998765 333333 22 111111110011111 111 3357899999999753 3333
Q ss_pred HhcccccccccCCCCCEEEEecCC
Q 022909 144 VACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
.. -..++.|..+||.|..
T Consensus 80 ~a------~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 80 YA------PYAVKAGVVVVDNTSY 97 (366)
T ss_dssp HH------HHHHHTTCEEEECSST
T ss_pred HH------HHHHHCCCEEEEcCCc
Confidence 33 1224568889999864
No 373
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.07 E-value=0.002 Score=58.24 Aligned_cols=94 Identities=16% Similarity=0.112 Sum_probs=63.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-----CCHHHHhh------cCCeEEEEeCCh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA------SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDivv~~~p~~ 138 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+-++..+
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~ 293 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVP 293 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCc
Confidence 6899999999999999999999999 89999999988877777665321 22222222 488898888765
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
..+...+ .+.+...++++..++.++.
T Consensus 294 ~~~~~~~--~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 294 QLVWPQI--EEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHHHH--HHHHHHCSCCCCEEEECSC
T ss_pred HHHHHHH--HHHHHhccCCCcEEEEeCC
Confidence 3232222 0111133377777777754
No 374
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.04 E-value=0.0008 Score=60.06 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=64.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCc---cchhhHHhCCCccCC--CHHHHh----hcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTK---SKCDPLISLGAKYQP--SPDEVA----ASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~---~~~~~~~~~g~~~~~--~~~~~~----~~aDivv~~~p~~~~~ 141 (290)
+++|.|+|.|.+|...++.++..|.+|++.++++ ++.+.+++.|...++ ++.+.+ ...|+|+.++..+..+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 260 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNI 260 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 6899999999999999999999999999999988 776666666654331 111222 2479999888764444
Q ss_pred -HHHhcccccccccCCCCCEEEEecCC
Q 022909 142 -MDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 142 -~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
... ++.++++..+++++..
T Consensus 261 ~~~~-------~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 261 LGNV-------IPLLGRNGVLGLFGFS 280 (366)
T ss_dssp HHHH-------GGGEEEEEEEEECSCC
T ss_pred HHHH-------HHHHhcCCEEEEEecC
Confidence 333 3556777777777643
No 375
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.02 E-value=0.0009 Score=57.97 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=61.8
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCC------HHHHhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPS------PDEVAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~------~~~~~~~aDivv~~~p~~~~~~~ 143 (290)
+.+|.|+|+ |.+|...++.++..|.+|++.++++++.+.+++.|....-+ ..+.+...|+|+. +.. .....
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~~~~~ 203 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-KEVEE 203 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-TTHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-HHHHH
Confidence 689999998 99999999999999999999999988887777766542211 1222346788888 754 33332
Q ss_pred HhcccccccccCCCCCEEEEecC
Q 022909 144 VACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.++.++++..++.++.
T Consensus 204 -------~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 204 -------SLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -------HHTTEEEEEEEEEC--
T ss_pred -------HHHhhccCCEEEEEeC
Confidence 2456677777776643
No 376
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=97.01 E-value=0.0011 Score=57.90 Aligned_cols=66 Identities=20% Similarity=0.279 Sum_probs=48.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCcc-------CCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKY-------QPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~-------~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| .|.||+.+++.|...|++|++.+|++.+.+.+.+.++.. .+++.++++++|+||.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 46999999 599999999999999999999999887655443323321 1235567788999987654
No 377
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.00 E-value=0.00053 Score=61.10 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=64.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCC------CHHHHh-hcCCeEEEEeCC--hhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQP------SPDEVA-ASCDVTFAMLAD--PESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~------~~~~~~-~~aDivv~~~p~--~~~~ 141 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|...+- +..+.+ ...|+|+.+++. +...
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~ 259 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDF 259 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHHH
Confidence 6899999999999999999999999999999999888777776653221 222222 357999988865 2222
Q ss_pred HHHhcccccccccCCCCCEEEEecC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+..++.++++..++.++.
T Consensus 260 -------~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 260 -------NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp -------TTGGGGEEEEEEEEECCC
T ss_pred -------HHHHHHhcCCCEEEEecC
Confidence 233566777777777754
No 378
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.98 E-value=0.0012 Score=58.91 Aligned_cols=45 Identities=27% Similarity=0.266 Sum_probs=40.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA 115 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~ 115 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|.
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC
Confidence 689999999999999999999999999999999887776666554
No 379
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.97 E-value=0.0012 Score=58.21 Aligned_cols=88 Identities=15% Similarity=0.121 Sum_probs=62.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh----cCCeEEEEeCChhHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA----SCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~----~aDivv~~~p~~~~~ 141 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+..+.+. ..|+|+.++......
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~~ 246 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAF 246 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHHH
Confidence 689999999999999999999999999999999988887777665321 12322222 467777776554433
Q ss_pred HHHhcccccccccCCCCCEEEEec
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
... ++.++++..++.++
T Consensus 247 ~~~-------~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 247 SQA-------IGMVRRGGTIALNG 263 (340)
T ss_dssp HHH-------HHHEEEEEEEEECS
T ss_pred HHH-------HHHhccCCEEEEeC
Confidence 333 34556666666664
No 380
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.97 E-value=0.0042 Score=55.04 Aligned_cols=89 Identities=20% Similarity=0.289 Sum_probs=56.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHh------CCCccC-CCHHHHhhcCCeEEEEeCChhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLIS------LGAKYQ-PSPDEVAASCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~------~g~~~~-~~~~~~~~~aDivv~~~p~~~~~ 141 (290)
+.||+||| .|..|+.+.+.|..+.. ++.........-+.+.+ ..+... .+.+++..++|++++|+|... .
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~-s 91 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA-S 91 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH-H
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH-H
Confidence 47899998 69999999999998753 66544432211122221 122221 245555588999999998743 4
Q ss_pred HHHhcccccccccCCCCCEEEEecCCC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTVD 168 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~~ 168 (290)
+.+. +.+ .|..+||.|+.-
T Consensus 92 ~~~~-------~~~-~g~~VIDlSsdf 110 (351)
T 1vkn_A 92 YDLV-------REL-KGVKIIDLGADF 110 (351)
T ss_dssp HHHH-------TTC-CSCEEEESSSTT
T ss_pred HHHH-------HHh-CCCEEEECChhh
Confidence 4443 223 789999998654
No 381
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.97 E-value=0.00086 Score=55.74 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=48.1
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC--eEEEEeCCccchhhHHhCCC-------ccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC--DVTVWNRTKSKCDPLISLGA-------KYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~--~V~~~d~~~~~~~~~~~~g~-------~~~~~~~~~~~~aDivv~~~p~ 137 (290)
+|+|.|.| .|.||+.+++.|...|+ +|.+.+|++++.+.....++ ...++++++++..|+||.+...
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 68999999 69999999999999999 99999998765432211111 1123455566678888777643
No 382
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.96 E-value=0.00098 Score=59.22 Aligned_cols=66 Identities=17% Similarity=0.324 Sum_probs=49.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC-CCeEEEEeCCccchhhHHh-CCCc--------cCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLIS-LGAK--------YQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~-~g~~--------~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| .|.||+.+++.|... |++|++.+|++++...+.. .++. ...+++++++++|+||-+..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 58999999 699999999999987 9999999998876554433 2221 11234567778999987543
No 383
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.94 E-value=0.0012 Score=58.16 Aligned_cols=67 Identities=24% Similarity=0.324 Sum_probs=48.9
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCc----cchh---hHHhCCCcc-------CCCHHHHhh--cCCeEEE
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTK----SKCD---PLISLGAKY-------QPSPDEVAA--SCDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~----~~~~---~~~~~g~~~-------~~~~~~~~~--~aDivv~ 133 (290)
+++|.|.|. |.+|+.+++.|...|++|.+.+|++ ++.. .+...++.. .+++.++++ ++|+||.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 478999997 9999999999999999999999976 2222 122233322 234566788 8999988
Q ss_pred EeCC
Q 022909 134 MLAD 137 (290)
Q Consensus 134 ~~p~ 137 (290)
+...
T Consensus 90 ~a~~ 93 (346)
T 3i6i_A 90 TVGG 93 (346)
T ss_dssp CCCG
T ss_pred CCch
Confidence 7764
No 384
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.94 E-value=0.00085 Score=59.29 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=60.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCCccCCCHH---HH---hh---cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGAKYQPSPD---EV---AA---SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~~~~~~~~---~~---~~---~aDivv~~~p~~~ 139 (290)
+.+|.|+|.|.+|...++.++.. |.+|++.++++++.+.+++.|...+-+.. +. +. ..|+|+.++..+.
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~~ 250 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEE 250 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCChH
Confidence 78999999999999999999998 99999999998887777666653322221 11 11 3677777776533
Q ss_pred HHHHHhcccccccccCCCCCEEEEec
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
..... ++.++++..++.++
T Consensus 251 ~~~~~-------~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 251 TTYNL-------GKLLAQEGAIILVG 269 (344)
T ss_dssp HHHHH-------HHHEEEEEEEEECC
T ss_pred HHHHH-------HHHhhcCCEEEEeC
Confidence 33332 34455666666554
No 385
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.94 E-value=0.0009 Score=59.10 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=24.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVTVW 100 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~~~ 100 (290)
..||||+|+|+||+.+++.+... +++|...
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI 33 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAV 33 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCCeEEEEE
Confidence 36999999999999999999876 4566544
No 386
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.93 E-value=0.0009 Score=57.87 Aligned_cols=67 Identities=25% Similarity=0.345 Sum_probs=49.1
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCcc-----chhhH---HhCCCcc-------CCCHHHHhhcCCeEEEE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKS-----KCDPL---ISLGAKY-------QPSPDEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~-----~~~~~---~~~g~~~-------~~~~~~~~~~aDivv~~ 134 (290)
+|+|.|.| .|.+|+.+++.|.+.|++|.+.+|++. +.+.+ ...++.. .+++.++++++|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 57899999 599999999999999999999999843 22222 2233322 12456778899999987
Q ss_pred eCC
Q 022909 135 LAD 137 (290)
Q Consensus 135 ~p~ 137 (290)
.+.
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 754
No 387
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.93 E-value=0.0015 Score=52.74 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=37.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG 114 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g 114 (290)
+++|.|+| .|.+|..+++.++..|.+|++.++++++.+.+++.|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g 83 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG 83 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 68999999 699999999999999999999999887665554433
No 388
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.92 E-value=0.0021 Score=56.10 Aligned_cols=66 Identities=21% Similarity=0.155 Sum_probs=48.1
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-------CCC--------ccCCCHHHHhhcCCeEEEE
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-------LGA--------KYQPSPDEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-------~g~--------~~~~~~~~~~~~aDivv~~ 134 (290)
+++|.|.|. |.||+.+++.|...|++|++.+|++++.+.+.+ .++ ....++++++++.|+||.+
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 90 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI 90 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEe
Confidence 689999996 999999999999999999999998765433221 111 1123455666778988876
Q ss_pred eC
Q 022909 135 LA 136 (290)
Q Consensus 135 ~p 136 (290)
..
T Consensus 91 A~ 92 (342)
T 1y1p_A 91 AS 92 (342)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 389
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.92 E-value=0.0018 Score=57.83 Aligned_cols=89 Identities=21% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-----CCHHHHhhc--------CCeEEEEeC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAAS--------CDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~~--------aDivv~~~p 136 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .+..+.+.+ .|+|+-++.
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 6899999999999999999999999 89999999888776666665321 233333332 688887775
Q ss_pred ChhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 137 DPESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
........ ++.++++..++.++.
T Consensus 263 ~~~~~~~~-------~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 263 VAETVKQS-------TRLAKAGGTVVILGV 285 (370)
T ss_dssp CHHHHHHH-------HHHEEEEEEEEECSC
T ss_pred CHHHHHHH-------HHHhccCCEEEEEec
Confidence 44333332 345666666666653
No 390
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.90 E-value=0.0012 Score=57.18 Aligned_cols=65 Identities=9% Similarity=0.120 Sum_probs=40.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhc--CCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAAS--CDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~--aDivv~~~p 136 (290)
+|+|.|.|. |.||+.+++.|...|++|++.+|+++... .....+....+++++++. .|+||.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 689999996 99999999999999999999998754311 111122223456667765 899887654
No 391
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.89 E-value=0.001 Score=58.41 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=47.2
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCC-------eEEEEeCCcc--chh----hHHhCC------CccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGC-------DVTVWNRTKS--KCD----PLISLG------AKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~-------~V~~~d~~~~--~~~----~~~~~g------~~~~~~~~~~~~~aDi 130 (290)
.|||.|+|. |.||+.++..|...|+ +|.++|+.+. +.. .+.+.. +....++.++++++|+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~ 83 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY 83 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence 689999996 9999999999998886 8999998641 111 111111 1222467788899999
Q ss_pred EEEEeC
Q 022909 131 TFAMLA 136 (290)
Q Consensus 131 vv~~~p 136 (290)
|+.+..
T Consensus 84 Vih~Ag 89 (327)
T 1y7t_A 84 ALLVGA 89 (327)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 987643
No 392
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.88 E-value=0.0016 Score=56.97 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=48.0
Q ss_pred CCCCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh-------CCCcc-------CCCHHHHhh--cCCeE
Q 022909 69 ELPGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS-------LGAKY-------QPSPDEVAA--SCDVT 131 (290)
Q Consensus 69 ~~~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~-------~g~~~-------~~~~~~~~~--~aDiv 131 (290)
+++|+|.|.| .|.||+.+++.|...|++|.+.+|++++.....+ .++.. ..+++++++ ..|+|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 3468999998 5999999999999999999999998665433221 12211 123455666 68988
Q ss_pred EEEeC
Q 022909 132 FAMLA 136 (290)
Q Consensus 132 v~~~p 136 (290)
+.+..
T Consensus 83 ih~A~ 87 (341)
T 3enk_A 83 IHFAA 87 (341)
T ss_dssp EECCC
T ss_pred EECcc
Confidence 87653
No 393
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.86 E-value=0.00069 Score=59.72 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=31.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~ 104 (290)
..+|.|||+|.+|..+++.|...|. +++++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 7999999999999999999999997 788998754
No 394
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.86 E-value=0.0013 Score=54.67 Aligned_cols=65 Identities=12% Similarity=0.032 Sum_probs=48.6
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCCc-------cCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGAK-------YQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivv~~~p 136 (290)
+++|.|.| .|.||+.+++.|.+. |++|++.+|++++.+.+ ..++. ..+++++++++.|+||.+..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 78 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS 78 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence 68999999 699999999999998 89999999987654433 11121 11245667788999988754
No 395
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.84 E-value=0.0011 Score=57.17 Aligned_cols=67 Identities=21% Similarity=0.270 Sum_probs=49.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCc-------cchhhH---HhCCCcc-------CCCHHHHhhcCCeEE
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTK-------SKCDPL---ISLGAKY-------QPSPDEVAASCDVTF 132 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~-------~~~~~~---~~~g~~~-------~~~~~~~~~~aDivv 132 (290)
+++|.|.|. |.+|+.+++.|.+.|++|.+.+|++ ++.+.+ ...++.. .+++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999995 9999999999999999999999986 332222 2234322 124566788899999
Q ss_pred EEeCC
Q 022909 133 AMLAD 137 (290)
Q Consensus 133 ~~~p~ 137 (290)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 87764
No 396
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.84 E-value=0.0015 Score=58.27 Aligned_cols=89 Identities=15% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCccC-----CCHHHHhh-----cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA-----SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~-----~aDivv~~~p~~~ 139 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|...+ .++.+.+. ..|+|+.++..+.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~ 270 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPE 270 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHH
Confidence 6899999999999999999999998 69999999888777766664321 12323222 3688888876533
Q ss_pred HHHHHhcccccccccCCCCCEEEEecC
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
..... ++.++++..++.++.
T Consensus 271 ~~~~~-------~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 271 ILKQG-------VDALGILGKIAVVGA 290 (371)
T ss_dssp HHHHH-------HHTEEEEEEEEECCC
T ss_pred HHHHH-------HHHHhcCCEEEEeCC
Confidence 33332 455667777776653
No 397
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=96.82 E-value=0.0016 Score=55.41 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=35.3
Q ss_pred CCCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 70 LPGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 70 ~~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
+++++.|.|. |.||+++++.|...|++|.+.+|++++.+..
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 44 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAI 44 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3788888885 8999999999999999999999998765544
No 398
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.79 E-value=0.0011 Score=58.89 Aligned_cols=89 Identities=20% Similarity=0.166 Sum_probs=63.1
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-hCCCccC---CCHHH---HhhcCCeEEEEeCChhHHHH
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-SLGAKYQ---PSPDE---VAASCDVTFAMLADPESAMD 143 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-~~g~~~~---~~~~~---~~~~aDivv~~~p~~~~~~~ 143 (290)
+.+|.|+|+|.+|...++.++..|.+|++.++++++.+.+. +.|...+ .+.+. +....|+|+-++..+.....
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~~~ 260 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEP 260 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHHHH
Confidence 78999999999999999999999999999999988777666 5564321 22222 22347999988865333333
Q ss_pred HhcccccccccCCCCCEEEEecC
Q 022909 144 VACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
. ++.++++..++.++.
T Consensus 261 ~-------~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 261 Y-------LSLLKLDGKLILMGV 276 (357)
T ss_dssp H-------HTTEEEEEEEEECSC
T ss_pred H-------HHHhccCCEEEEeCC
Confidence 2 355677777777754
No 399
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=96.76 E-value=0.0017 Score=55.82 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=35.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
++++.|.| .|.||+++++.|++.|++|.+.+|+.++.++..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 69 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA 69 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 67888888 589999999999999999999999987655443
No 400
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.75 E-value=0.0028 Score=56.22 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=25.5
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVTVWN 101 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~~~d 101 (290)
+.||||+|+|+||+.+.+.|... .++|...+
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 46999999999999999999876 56766554
No 401
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.75 E-value=0.00091 Score=58.18 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=49.1
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCc-c-----chhhH---HhCCCcc-------CCCHHHHhhcCCeEEE
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTK-S-----KCDPL---ISLGAKY-------QPSPDEVAASCDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~-~-----~~~~~---~~~g~~~-------~~~~~~~~~~aDivv~ 133 (290)
+|+|.|.|. |.+|+.+++.|.+.|++|.+.+|++ . +.+.+ ...++.. .+++.++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 578999995 9999999999999999999999986 2 22211 2233321 1246677889999998
Q ss_pred EeCC
Q 022909 134 MLAD 137 (290)
Q Consensus 134 ~~p~ 137 (290)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 7653
No 402
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=96.74 E-value=0.00077 Score=56.37 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=32.1
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccch
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKC 107 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~ 107 (290)
++|.|.|. |.||+.+++.|...|++|++.+|++++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~ 38 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI 38 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc
Confidence 57999985 9999999999999999999999987653
No 403
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.74 E-value=0.0012 Score=56.35 Aligned_cols=65 Identities=22% Similarity=0.243 Sum_probs=49.3
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCCcc-------CCCHHHHhhcCCeEEEEeC
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGAKY-------QPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~~~-------~~~~~~~~~~aDivv~~~p 136 (290)
|+|.|.|. |.||+.+++.|... |++|.+.+|++++...+...++.. .+++.++++++|+|+.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 46899996 99999999999998 999999999887765554433321 1235567788999987654
No 404
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.73 E-value=0.0022 Score=57.55 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=40.0
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCC-CeEEEEeCCccchhhHHhCCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLISLGA 115 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~~g~ 115 (290)
+.+|.|+|.|.+|...++.++..| .+|++.++++++.+.+++.|.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa 241 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC
Confidence 689999999999999999999999 699999999888777766664
No 405
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.73 E-value=0.0021 Score=56.84 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=49.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC-CC-eEEEEeCCccchhhHHh----CCCc-------cCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA-GC-DVTVWNRTKSKCDPLIS----LGAK-------YQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~-g~-~V~~~d~~~~~~~~~~~----~g~~-------~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| .|.||+.+++.|... |+ +|++++|++.+...+.+ .++. -.+++.+++++.|+||.+..
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCC
Confidence 78999999 599999999999998 97 99999998766544332 1221 11234566778999988764
No 406
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.72 E-value=0.0021 Score=59.26 Aligned_cols=107 Identities=18% Similarity=0.199 Sum_probs=73.6
Q ss_pred CCeEEEEccc----HhHHHHHHHHHHCC-CeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHh
Q 022909 71 PGRIGFLGMG----IMGTPMAQNLLKAG-CDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 71 ~~~IgiiG~G----~iG~~la~~l~~~g-~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~ 145 (290)
.++|+|||.+ ++|..+.+.+...| ..|+.+++..+.. .|...+.++.|+.+..|++++++|. +.+..++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i-----~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~~v 81 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----QGVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTL 81 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----TTEECBSSTTSCSSCCSEEEECSCH-HHHHHHH
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE-----CCEeccCCHHHcCCCCCEEEEecCH-HHHHHHH
Confidence 6899999997 89999999999885 6777777653322 4677778888888889999999986 4555555
Q ss_pred cccccccccCCCCCEEEEecCCCh--hH-----HHHHHHHHHHcCCcEEe
Q 022909 146 CGKHGAASGMGPGKGYVDVSTVDG--DT-----SKLINGHIKATGASFLE 188 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~~~--~~-----~~~l~~~l~~~~~~~~~ 188 (290)
++..+. .-. .+|..+.+-+ .+ .+++.+.+++.+++++.
T Consensus 82 ---~e~~~~-Gi~-~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viG 126 (457)
T 2csu_A 82 ---IQCGEK-GVK-GVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIG 126 (457)
T ss_dssp ---HHHHHH-TCC-EEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEEC
T ss_pred ---HHHHHc-CCC-EEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEc
Confidence 222222 222 3344444332 22 66788888888888774
No 407
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.72 E-value=0.0014 Score=58.83 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=53.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCC-CeEE-EE-eCC-ccc-hhhH-------------HhCCCccCCCHHHHhhcCCeE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAG-CDVT-VW-NRT-KSK-CDPL-------------ISLGAKYQPSPDEVAASCDVT 131 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g-~~V~-~~-d~~-~~~-~~~~-------------~~~g~~~~~~~~~~~~~aDiv 131 (290)
++|||||| .|..|+.+.+.|..+. .++. ++ +++ ..+ .... .+.-+... +.++.++++|+|
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~-~~~~~~~~~Dvv 97 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQEC-KPEGNFLECDVV 97 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEES-SSCTTGGGCSEE
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeC-chhhhcccCCEE
Confidence 47899999 6999999999998765 3664 33 332 211 1110 11111111 112146789999
Q ss_pred EEEeCChhHHHHHhcccccccccCCCCCEEEEecCC
Q 022909 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 132 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
++|+|... .+... + ...+.|..+||.|..
T Consensus 98 f~alp~~~-s~~~~---~---~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 98 FSGLDADV-AGDIE---K---SFVEAGLAVVSNAKN 126 (381)
T ss_dssp EECCCHHH-HHHHH---H---HHHHTTCEEEECCST
T ss_pred EECCChhH-HHHHH---H---HHHhCCCEEEEcCCc
Confidence 99997633 33333 1 224568889999753
No 408
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.71 E-value=0.0027 Score=57.09 Aligned_cols=63 Identities=22% Similarity=0.245 Sum_probs=44.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchh-hHHhCCC-ccCCC---HHHHhhcCCeEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCD-PLISLGA-KYQPS---PDEVAASCDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~-~~~~~g~-~~~~~---~~~~~~~aDivv~ 133 (290)
+++|+|||.|.+|+.+++.+++.|++|+++|+++.... ...+..+ ....+ +.++++++|+|+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 78999999999999999999999999999998764321 1111000 11122 5567788998854
No 409
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.70 E-value=0.0042 Score=54.45 Aligned_cols=88 Identities=18% Similarity=0.106 Sum_probs=60.0
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC------CCHHHHhh-----cCCeEEEEeCCh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ------PSPDEVAA-----SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~------~~~~~~~~-----~aDivv~~~p~~ 138 (290)
+++|.|+|+ |.||..+++.++..|.+|++.++++++.+.+++.|.... .+..+.+. ..|+++.++..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~- 224 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG- 224 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH-
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh-
Confidence 689999997 999999999999999999999999877776655554211 23333332 35777776642
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.... ..++.++++..++.++.
T Consensus 225 ~~~~-------~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 EFLN-------TVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHH-------HHHTTEEEEEEEEECCC
T ss_pred HHHH-------HHHHHHhcCCEEEEEec
Confidence 2222 22455667777776653
No 410
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.68 E-value=0.002 Score=57.07 Aligned_cols=45 Identities=20% Similarity=0.326 Sum_probs=39.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGA 115 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~ 115 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa 212 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence 6899999999999999999999998 89999999887776666654
No 411
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.67 E-value=0.0022 Score=56.55 Aligned_cols=88 Identities=14% Similarity=0.084 Sum_probs=58.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCcc-----CCCHHHHhh-----cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAKY-----QPSPDEVAA-----SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~~-----~~~~~~~~~-----~aDivv~~~p~~~ 139 (290)
+.+|.|+|.|.+|...++.++..|. +|++.++++++.+.+++. ... ..++.+.+. ..|+|+.++..+.
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 7899999999999999999999999 999999988766554433 211 112333332 4677777775533
Q ss_pred HHHHHhcccccccccCCCCCEEEEecC
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
..... ++.++++..++.++.
T Consensus 244 ~~~~~-------~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 AIHQG-------LMALIPGGEARILGI 263 (343)
T ss_dssp HHHHH-------HHHEEEEEEEEECCC
T ss_pred HHHHH-------HHHHhcCCEEEEEec
Confidence 33332 344556666666643
No 412
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=96.67 E-value=0.019 Score=50.74 Aligned_cols=157 Identities=9% Similarity=0.003 Sum_probs=98.7
Q ss_pred CCeEEEEcccHhHHHHHHHH---HHC--CCeEE-EEeCCccchhhHHh------CCCccCCCHHHHhh-cCCeEEEEe-C
Q 022909 71 PGRIGFLGMGIMGTPMAQNL---LKA--GCDVT-VWNRTKSKCDPLIS------LGAKYQPSPDEVAA-SCDVTFAML-A 136 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l---~~~--g~~V~-~~d~~~~~~~~~~~------~g~~~~~~~~~~~~-~aDivv~~~-p 136 (290)
.+++.|.|.|.+|+..++.. ..+ ++++. ++ +.. .-..+.+ .|+....|++++++ .+|++++.+ |
T Consensus 22 ~~~~vi~~~g~~g~~~aKta~gllr~~~~~~iVgvi-~~~-~Gkd~ge~~~g~~~gipv~~d~~~al~~~~d~lvig~a~ 99 (350)
T 2g0t_A 22 GTPAAIVAWGQLGTAHAKTTYGLLRHSRLFKPVCVV-AEH-EGKMASDFVKPVRYDVPVVSSVEKAKEMGAEVLIIGVSN 99 (350)
T ss_dssp TEEEEEECTTTTTSGGGHHHHHHHHHCSSEEEEEEE-SSC-TTCBGGGTCC-CCSCCBEESSHHHHHHTTCCEEEECCCS
T ss_pred CCCEEEEeCCCCChHHHHHHHHHHhhCCCCeEEEEe-ecC-CCCcHHHhhCCCCCCceeeCCHHHHHhcCCCEEEEEecC
Confidence 57899999999999888854 554 46654 44 321 1111221 35777789999987 699999986 4
Q ss_pred ChhHHH-HHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCC-------CCccccCCceEEEec
Q 022909 137 DPESAM-DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG-------SKKPAEDGQLIFLAA 208 (290)
Q Consensus 137 ~~~~~~-~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~ 208 (290)
...... ... +.+.+.++.|.-+|+.......+..++.++.+++|..+++...-. +.......+.++++|
T Consensus 100 ~gg~l~~~~~---~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~p~~l~v~~g~i~~i~~~ri~v~G 176 (350)
T 2g0t_A 100 PGGYLEEQIA---TLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIPPLELDVLRGGIYRKKIKVVGVFG 176 (350)
T ss_dssp CCHHHHHHHH---HHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSCCSSCCCCCSGGGGCCSEEEEEEE
T ss_pred CCCCCCHHHH---HHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcCCCcccccccceeeecceEEEEec
Confidence 333333 222 445677889999999888877777888888888888888832111 111111234455566
Q ss_pred CCH-----HHHHHHHHHHHHhCCcEEEeC
Q 022909 209 GDK-----SLYNTVAPLLDIMGKSRFYLG 232 (290)
Q Consensus 209 ~~~-----~~~~~v~~ll~~~G~~~~~~~ 232 (290)
.+. .....+.+.+..-|.++.+++
T Consensus 177 TDt~vGKt~t~~~L~~~l~~~G~~v~~v~ 205 (350)
T 2g0t_A 177 TDCVVGKRTTAVQLWERALEKGIKAGFLA 205 (350)
T ss_dssp SSSSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCccCccHHHHHHHHHHhcCCeEEEEc
Confidence 542 333455566777788776654
No 413
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.66 E-value=0.0014 Score=57.60 Aligned_cols=65 Identities=14% Similarity=0.056 Sum_probs=46.1
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHH--hCCCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI--SLGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~--~~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.|. |.||+.+++.|...|++|++.+|++.. .... ...+.-..++.++++++|+|+.+..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 86 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA 86 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence 789999996 999999999999999999999998754 1100 0112222345677889999987654
No 414
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.66 E-value=0.0059 Score=55.85 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=48.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccch--hhHHhCCCccC--CCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKC--DPLISLGAKYQ--PSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~--~~~~~~g~~~~--~~~~~~~~~aDivv~~~ 135 (290)
+++|.|||.|..|.+.|+.|...|++|.++|.+.... ..++ .|+.+. ....+.++.+|.||+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 6899999999999999999999999999999865432 2344 465542 21345667899988863
No 415
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=96.64 E-value=0.0057 Score=53.37 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=47.3
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchh------hHHh-CC-------CccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCD------PLIS-LG-------AKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~------~~~~-~g-------~~~~~~~~~~~~~aDivv~~~ 135 (290)
+|+|.|.| +|.||+.+++.|...|++|.+..|++++.. .+.. .+ +....+++++++++|+||-+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 68999999 699999999999999999998888765321 1111 11 222245677888899988654
No 416
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.64 E-value=0.0061 Score=55.42 Aligned_cols=106 Identities=13% Similarity=0.156 Sum_probs=67.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCC----------ccchhhHHh-CC-------CccCCCHHHHhh-cCCe
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRT----------KSKCDPLIS-LG-------AKYQPSPDEVAA-SCDV 130 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~----------~~~~~~~~~-~g-------~~~~~~~~~~~~-~aDi 130 (290)
+++|.|.|+|++|+..++.|...|.+|+ +.|++ .+.+.++++ .+ .... +.++++. +||+
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i-~~~ei~~~~~DI 313 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPL-PAADFWGLPVEF 313 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEEC-CHHHHTTCCCSE
T ss_pred CCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEc-CchhhhcCCCcE
Confidence 7999999999999999999999999887 56652 223333332 21 1222 4556654 6999
Q ss_pred EEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 131 TFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 131 vv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
++-|...+. + +.+..+.+ .-.+|+-.+.+.. + .+-.+.|.++|+.++
T Consensus 314 lvPcA~~n~-----i--~~~na~~l-~ak~VvEgAN~p~-t-~eA~~iL~~~GI~~~ 360 (440)
T 3aog_A 314 LVPAALEKQ-----I--TEQNAWRI-RARIVAEGANGPT-T-PAADDILLEKGVLVV 360 (440)
T ss_dssp EEECSSSSC-----B--CTTTGGGC-CCSEEECCSSSCB-C-HHHHHHHHHHTCEEE
T ss_pred EEecCCcCc-----c--chhhHHHc-CCcEEEecCcccc-C-HHHHHHHHHCCCEEE
Confidence 998765432 2 23334445 3455665555553 3 345577888888775
No 417
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.63 E-value=0.0027 Score=56.73 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=48.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCc-------cCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAK-------YQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.|. |.||+.+++.|...|++|++.+|++.+.......++. ...+++++++.+|+||.+..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 589999996 9999999999999999999999987553322222221 11235567788999887654
No 418
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.63 E-value=0.0012 Score=57.22 Aligned_cols=113 Identities=8% Similarity=-0.037 Sum_probs=71.5
Q ss_pred CCCCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChh---------
Q 022909 69 ELPGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPE--------- 139 (290)
Q Consensus 69 ~~~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~--------- 139 (290)
+++|+|.|+|.........+.|.+.|++|.+.....+. ..+.|....+++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~---~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLD---HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSS---CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccc---cccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 33789999999999999999999999999877432211 112244445566777889999986332210
Q ss_pred -HHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCcc
Q 022909 140 -SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 191 (290)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~ 191 (290)
.....+ +++.++.+++..+++ ++ . +..++.+++.++++.+...|-
T Consensus 82 a~~~~~~--~~~~l~~~~~l~~i~-~g-~---~~~d~~~~~~~~gi~v~~~~~ 127 (300)
T 2rir_A 82 SNEEVVL--KQDHLDRTPAHCVIF-SG-I---SNAYLENIAAQAKRKLVKLFE 127 (300)
T ss_dssp CSSCEEC--CHHHHHTSCTTCEEE-ES-S---CCHHHHHHHHHTTCCEEEGGG
T ss_pred ccCCccc--hHHHHhhcCCCCEEE-Ee-c---CCHHHHHHHHHCCCEEEeecC
Confidence 001001 233456677777776 22 2 334555777788888877653
No 419
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=96.63 E-value=0.0026 Score=54.48 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=34.2
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
+++++.|.| .|.||+++++.|+..|++|.+.+|++++.+..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 64 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAA 64 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 378899998 48999999999999999999999987765543
No 420
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=96.62 E-value=0.0076 Score=50.59 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=35.0
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. |.||+++++.|.+.|++|.+.+|++++.+..
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 52 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQV 52 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 788889985 8999999999999999999999998765544
No 421
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.60 E-value=0.0043 Score=55.54 Aligned_cols=63 Identities=24% Similarity=0.261 Sum_probs=44.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchh-hHHhCCC-ccCCC---HHHHhhcCCeEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCD-PLISLGA-KYQPS---PDEVAASCDVTFA 133 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~-~~~~~g~-~~~~~---~~~~~~~aDivv~ 133 (290)
+++|+|+|.|.+|+.+++.+++.|++|+++|++++... ...+.-+ ....+ +.++++++|+|+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 68999999999999999999999999999998765321 1111100 01122 4556678998754
No 422
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.57 E-value=0.0014 Score=56.34 Aligned_cols=58 Identities=24% Similarity=0.319 Sum_probs=42.3
Q ss_pred CeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEe
Q 022909 72 GRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 72 ~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~ 135 (290)
|||.|.|. |.||+.+++.|.+.|++|++..|++.+.. +.......+.++++|.|+-+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 68999996 99999999999999999999999875421 111011223456788887543
No 423
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.57 E-value=0.0038 Score=55.00 Aligned_cols=65 Identities=14% Similarity=0.112 Sum_probs=47.3
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC--e-----EEEEeCCcc--chh----hHHhCC------CccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC--D-----VTVWNRTKS--KCD----PLISLG------AKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~--~-----V~~~d~~~~--~~~----~~~~~g------~~~~~~~~~~~~~aDi 130 (290)
.+||.|+| +|.||..++..|...|. + +.++|+++. +.+ ++.+.. +...++..+.+++||+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 58999999 79999999999988775 5 999999742 221 122211 2233567788999999
Q ss_pred EEEEe
Q 022909 131 TFAML 135 (290)
Q Consensus 131 vv~~~ 135 (290)
|+++.
T Consensus 83 VvitA 87 (333)
T 5mdh_A 83 AILVG 87 (333)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99875
No 424
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=96.56 E-value=0.01 Score=50.34 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=34.3
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP 109 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~ 109 (290)
+++|.|.| .|.||+.+++.|...|++|++.+|++++.+.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 70 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE 70 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHH
Confidence 68899998 5999999999999999999999998765443
No 425
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.56 E-value=0.0036 Score=55.88 Aligned_cols=66 Identities=15% Similarity=0.136 Sum_probs=44.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCC-----eEEEEeCCccch----h----hHHhC------CCccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGC-----DVTVWNRTKSKC----D----PLISL------GAKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~-----~V~~~d~~~~~~----~----~~~~~------g~~~~~~~~~~~~~aDi 130 (290)
..||+|+| .|.+|.+++-.+...+. ++.+++.+.+.. + ++... .+...++..+.+++||+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 68999999 79999999999988664 277765543321 1 11111 11234466778999999
Q ss_pred EEEEeC
Q 022909 131 TFAMLA 136 (290)
Q Consensus 131 vv~~~p 136 (290)
||++.-
T Consensus 112 VVitag 117 (375)
T 7mdh_A 112 ALLIGA 117 (375)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999753
No 426
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.56 E-value=0.014 Score=51.84 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=61.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCe-EEEEeCCccchhhHHhCCCcc----C--CCHHHH---h------hcCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCD-VTVWNRTKSKCDPLISLGAKY----Q--PSPDEV---A------ASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~-V~~~d~~~~~~~~~~~~g~~~----~--~~~~~~---~------~~aDivv~~ 134 (290)
+.+|.|+|+|.+|...++.++..|.+ |++.++++++.+.+++.+-.. . .+.+++ + ...|+|+-+
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~ 259 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALEC 259 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEEC
Confidence 78999999999999999999999997 999999988877665541111 0 111222 1 147888888
Q ss_pred eCChhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 135 LADPESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 135 ~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+..+...... ++.++++..++.++.
T Consensus 260 ~g~~~~~~~~-------~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 260 TGVESSIAAA-------IWAVKFGGKVFVIGV 284 (363)
T ss_dssp SCCHHHHHHH-------HHHSCTTCEEEECCC
T ss_pred CCChHHHHHH-------HHHhcCCCEEEEEcc
Confidence 8654333332 456778777777753
No 427
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.54 E-value=0.0033 Score=55.20 Aligned_cols=66 Identities=17% Similarity=0.136 Sum_probs=47.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh----HHh-------CCCc-------cCCCHHHHhhcCCeE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP----LIS-------LGAK-------YQPSPDEVAASCDVT 131 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~----~~~-------~g~~-------~~~~~~~~~~~aDiv 131 (290)
+|+|.|.| .|.||+.+++.|...|++|++.+|++..... +.. .++. -.++++++++++|+|
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 104 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHV 104 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEE
Confidence 68999999 5999999999999999999999997653221 111 1111 112356677789999
Q ss_pred EEEeC
Q 022909 132 FAMLA 136 (290)
Q Consensus 132 v~~~p 136 (290)
|-+..
T Consensus 105 ih~A~ 109 (351)
T 3ruf_A 105 LHQAA 109 (351)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 87764
No 428
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.52 E-value=0.0018 Score=61.18 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=31.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~ 104 (290)
..+|.|||+|.+|..+++.|+..|. +++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 6899999999999999999999997 799999864
No 429
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.52 E-value=0.022 Score=51.57 Aligned_cols=107 Identities=18% Similarity=0.197 Sum_probs=68.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeC----------CccchhhHHh-CC-Cc--cCCCHHHHhh-cCCeEEEE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNR----------TKSKCDPLIS-LG-AK--YQPSPDEVAA-SCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~----------~~~~~~~~~~-~g-~~--~~~~~~~~~~-~aDivv~~ 134 (290)
+++|.|.|+|++|+..++.|...|.+|. +.|+ +.+...++++ .+ +. .. +.++++. +||+++-|
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~-~~~e~~~~~~DVliP~ 296 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDL-APEEVFGLEAEVLVLA 296 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCB-CTTTGGGSSCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeec-cchhhhccCceEEEec
Confidence 7999999999999999999999999987 7777 3343433333 22 11 11 2234433 79999887
Q ss_pred eCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 135 LADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 135 ~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
...+.-+.. ..+.++ =.+|+.-++... + .+-.+.|.++|+.++.
T Consensus 297 A~~n~i~~~-------~A~~l~-ak~V~EgAN~p~-t-~~A~~~L~~~Gi~~~P 340 (419)
T 3aoe_E 297 AREGALDGD-------RARQVQ-AQAVVEVANFGL-N-PEAEAYLLGKGALVVP 340 (419)
T ss_dssp SCTTCBCHH-------HHTTCC-CSEEEECSTTCB-C-HHHHHHHHHHTCEEEC
T ss_pred ccccccccc-------hHhhCC-ceEEEECCCCcC-C-HHHHHHHHHCCCEEEC
Confidence 644332222 233342 346677666654 3 4455778888888763
No 430
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.51 E-value=0.0097 Score=53.82 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=67.2
Q ss_pred CCeEEEEcccHhHHHHHHHHHH-CCCeEE-EEeC----------CccchhhHHhC-C-------CccCCCHHHHhh-cCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLK-AGCDVT-VWNR----------TKSKCDPLISL-G-------AKYQPSPDEVAA-SCD 129 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~-~g~~V~-~~d~----------~~~~~~~~~~~-g-------~~~~~~~~~~~~-~aD 129 (290)
+++|.|.|+|++|+..++.|.. .|.+|+ +.|. +++...++++. + .... +.++++. +||
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~-~~~eil~~~~D 287 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-TNEELLELDVD 287 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEE-CHHHHTTCSCS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEc-CchhhhcCCCc
Confidence 7999999999999999999998 999887 5565 33333333331 1 1222 4456654 799
Q ss_pred eEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 130 VTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 130 ivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+++-|...+.-+..- .+.+ .-.+|+--+.+.. + .+-.+.|.++|+.++.
T Consensus 288 IliP~A~~n~i~~~~-------a~~l-~ak~V~EgAN~p~-t-~~a~~~l~~~Gi~~~P 336 (415)
T 2tmg_A 288 ILVPAALEGAIHAGN-------AERI-KAKAVVEGANGPT-T-PEADEILSRRGILVVP 336 (415)
T ss_dssp EEEECSSTTSBCHHH-------HTTC-CCSEEECCSSSCB-C-HHHHHHHHHTTCEEEC
T ss_pred EEEecCCcCccCccc-------HHHc-CCeEEEeCCCccc-C-HHHHHHHHHCCCEEEC
Confidence 999887654433322 2333 3445555555443 3 3455678888887653
No 431
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=96.50 E-value=0.0052 Score=53.16 Aligned_cols=41 Identities=10% Similarity=0.074 Sum_probs=35.5
Q ss_pred CCCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 70 LPGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 70 ~~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
.++++.|.|. |.||+++++.|...|++|++.+|++++.+..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 71 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQA 71 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3688999985 8999999999999999999999998765544
No 432
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.50 E-value=0.002 Score=57.60 Aligned_cols=88 Identities=10% Similarity=0.179 Sum_probs=50.4
Q ss_pred CeEEEEc-ccHhHHHHHH-HHHHCCC---eEEEEeCC-ccc-hhhHHhCCCcc--CCCHHHHhhcCCeEEEEeCChhHHH
Q 022909 72 GRIGFLG-MGIMGTPMAQ-NLLKAGC---DVTVWNRT-KSK-CDPLISLGAKY--QPSPDEVAASCDVTFAMLADPESAM 142 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~-~l~~~g~---~V~~~d~~-~~~-~~~~~~~g~~~--~~~~~~~~~~aDivv~~~p~~~~~~ 142 (290)
+||+|+| +|.+|+.+.+ .|...++ .+.....+ ..+ ...+....+.. ..+.++ ++++|+|+.|+|... ..
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~-s~ 79 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDY-TN 79 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHH-HH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchh-HH
Confidence 6899999 9999999999 5665543 44444332 111 11111112222 223444 578999999997533 33
Q ss_pred HHhcccccccccCCCCC--EEEEecCC
Q 022909 143 DVACGKHGAASGMGPGK--GYVDVSTV 167 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~--~lin~s~~ 167 (290)
... + ...+.|. ++||.|+.
T Consensus 80 ~~a---~---~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 80 EIY---P---KLRESGWQGYWIDAASS 100 (367)
T ss_dssp HHH---H---HHHHTTCCCEEEECSST
T ss_pred HHH---H---HHHHCCCCEEEEcCChh
Confidence 333 1 1223454 88988754
No 433
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=96.50 E-value=0.0016 Score=54.65 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=31.6
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccch
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKC 107 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~ 107 (290)
++|.|.| .|.||+++++.|.+.|++|++.+|++++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 38 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV 38 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 5688888 59999999999999999999999987653
No 434
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.49 E-value=0.0053 Score=53.89 Aligned_cols=88 Identities=19% Similarity=0.141 Sum_probs=61.0
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH-HhCCCccC-----CCHHHHhh-----cCCeEEEEeCCh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL-ISLGAKYQ-----PSPDEVAA-----SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~-~~~g~~~~-----~~~~~~~~-----~aDivv~~~p~~ 138 (290)
+++|.|+|+ |.||...++.++..|.+|++.++++++.+.+ ++.|.... .+..+.+. ..|+|+.++..
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~- 228 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG- 228 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc-
Confidence 689999998 9999999999999999999999998887777 55554321 12222222 36777776642
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.... ..++.++++..++.++.
T Consensus 229 ~~~~-------~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 229 EILD-------TVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHH-------HHHTTEEEEEEEEECCC
T ss_pred chHH-------HHHHHHhhCCEEEEEee
Confidence 2222 23456677777776654
No 435
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.49 E-value=0.0037 Score=59.02 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=50.7
Q ss_pred CeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh--CC-CccCCCHHHH-hhcCCeEEEEeCChhH
Q 022909 72 GRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS--LG-AKYQPSPDEV-AASCDVTFAMLADPES 140 (290)
Q Consensus 72 ~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~--~g-~~~~~~~~~~-~~~aDivv~~~p~~~~ 140 (290)
++|.|+|+|++|+.+|+.|...|++|.+.|.++++.+++.. .| ..-...++++ ++++|.++++++.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ 421 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDST 421 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchH
Confidence 78999999999999999999999999999999987665431 00 1111112222 4679999999877543
No 436
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=96.48 E-value=0.0053 Score=51.74 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=35.8
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS 112 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~ 112 (290)
|.|+|.|-| .+.||+++|+.|++.|.+|.+.|+++++.+++.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~ 44 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 468888887 5889999999999999999999999876655544
No 437
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.48 E-value=0.0033 Score=55.95 Aligned_cols=88 Identities=18% Similarity=0.117 Sum_probs=60.1
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh-----cCCeEEEEeCChh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA-----SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~-----~aDivv~~~p~~~ 139 (290)
+.+|.|+| .|.+|...++.++..|.+|++.++++++.+.+++.|.... .++.+.+. ..|+|+.++.. .
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 242 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG-A 242 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-H
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-H
Confidence 68999999 7999999999999999999999999887777766654321 12333332 35777777653 2
Q ss_pred HHHHHhcccccccccCCCCCEEEEecC
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
.... .++.++++..++.++.
T Consensus 243 ~~~~-------~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 243 MFDL-------AVDALATKGRLIVIGF 262 (362)
T ss_dssp HHHH-------HHHHEEEEEEEEECCC
T ss_pred HHHH-------HHHHHhcCCEEEEEeC
Confidence 2222 2445566666666643
No 438
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.47 E-value=0.0025 Score=55.71 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=45.5
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh--CCC-------ccCCCHHHHhh--cCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS--LGA-------KYQPSPDEVAA--SCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~--~g~-------~~~~~~~~~~~--~aDivv~~~p 136 (290)
+|+|.|.|. |.||+.+++.|...|++|++.+|++.......+ .++ .-..+++++++ ..|+||.+..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA 97 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCc
Confidence 789999996 999999999999999999999997543221101 011 11113455666 7888877654
No 439
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.47 E-value=0.0066 Score=55.05 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=60.6
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCCc---------------cchhhHHh-CC-------CccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRTK---------------SKCDPLIS-LG-------AKYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~~---------------~~~~~~~~-~g-------~~~~~~~~~~~~ 126 (290)
+++|.|.|+|++|+..++.|...|.+|+ +.|.++ +.+.++++ .+ .... +.++++.
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~~~~~ 290 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDEEFWT 290 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Cccchhc
Confidence 7899999999999999999999999987 667762 22222222 11 1222 2234433
Q ss_pred -cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 127 -SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 127 -~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+|||++-|.+.+.-+..- ...+ ...+|+-.+.++. + .+-.+.|.++|+.++
T Consensus 291 ~~~DIliP~A~~n~i~~~~-------A~~l-~ak~VvEgAN~P~-t-~ea~~il~~~GI~~~ 342 (421)
T 2yfq_A 291 KEYDIIVPAALENVITGER-------AKTI-NAKLVCEAANGPT-T-PEGDKVLTERGINLT 342 (421)
T ss_dssp ----CEEECSCSSCSCHHH-------HTTC-CCSEEECCSSSCS-C-HHHHHHHHHHTCEEE
T ss_pred CCccEEEEcCCcCcCCccc-------HHHc-CCeEEEeCCcccc-C-HHHHHHHHHCCCEEE
Confidence 699998876544333322 2334 4456666555554 3 345567778888765
No 440
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.47 E-value=0.0062 Score=55.14 Aligned_cols=107 Identities=19% Similarity=0.177 Sum_probs=65.3
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCC----------ccchhhHHhC-CC------------ccCCCHHHHhh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRT----------KSKCDPLISL-GA------------KYQPSPDEVAA 126 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~----------~~~~~~~~~~-g~------------~~~~~~~~~~~ 126 (290)
+++|.|.|+|++|+..++.|...|.+|+ +.|.+ .+.+.++++. +. ....+.++++.
T Consensus 210 gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~~ 289 (421)
T 1v9l_A 210 GKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFK 289 (421)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhhc
Confidence 7999999999999999999999999887 55652 2222222211 11 12213345554
Q ss_pred -cCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEE
Q 022909 127 -SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 187 (290)
Q Consensus 127 -~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~ 187 (290)
+||+++-|-- ...+ +.+..+.++ =.+|+--++... + .+-.+.|.++|+.++
T Consensus 290 ~~~Dil~P~A~-----~~~I--~~~~a~~l~-ak~V~EgAN~p~-t-~~a~~~l~~~Gi~~~ 341 (421)
T 1v9l_A 290 LDVDIFVPAAI-----ENVI--RGDNAGLVK-ARLVVEGANGPT-T-PEAERILYERGVVVV 341 (421)
T ss_dssp CCCSEEEECSC-----SSCB--CTTTTTTCC-CSEEECCSSSCB-C-HHHHHHHHTTTCEEE
T ss_pred CCccEEEecCc-----CCcc--chhhHHHcC-ceEEEecCCCcC-C-HHHHHHHHHCCCEEe
Confidence 6999886652 2333 333445553 245555555443 3 345577888888776
No 441
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.47 E-value=0.0031 Score=55.59 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=58.5
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHH-hCCCccC------CCHHHHhh-----cCCeEEEEeCC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI-SLGAKYQ------PSPDEVAA-----SCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~-~~g~~~~------~~~~~~~~-----~aDivv~~~p~ 137 (290)
+++|.|+|+ |.+|..+++.++..|.+|++.++++++.+.++ +.|.... .++.+.+. ..|+|+.++..
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 235 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGG 235 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCH
Confidence 689999997 99999999999999999999999988777666 4554211 12333332 36777766632
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEec
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
..... .++.++++..++.++
T Consensus 236 -~~~~~-------~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 236 -KMLDA-------VLVNMNMHGRIAVCG 255 (345)
T ss_dssp -HHHHH-------HHTTEEEEEEEEECC
T ss_pred -HHHHH-------HHHHHhcCCEEEEEc
Confidence 22222 245556666666654
No 442
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.47 E-value=0.021 Score=50.94 Aligned_cols=90 Identities=21% Similarity=0.151 Sum_probs=64.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh---cCCeEEEEeCChhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA---SCDVTFAMLADPESA 141 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~---~aDivv~~~p~~~~~ 141 (290)
+.+|.|+| .|.+|...++.++..|.+|++.+ ++++.+.+++.|...+ .+..+.+. ..|+|+.++.....+
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 68999999 79999999999999999999888 5566666666665321 23333332 489999988654221
Q ss_pred HHHhcccccccccCCCCCEEEEecCC
Q 022909 142 MDVACGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~lin~s~~ 167 (290)
+ ...++.++++..++.++..
T Consensus 263 ---~---~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 263 ---W---APDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp ---H---GGGGBCSSSCCEEEESCCS
T ss_pred ---h---HHHHHhhcCCcEEEEeCCC
Confidence 1 2336778888888888653
No 443
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.47 E-value=0.00091 Score=59.20 Aligned_cols=89 Identities=15% Similarity=0.132 Sum_probs=51.8
Q ss_pred CeEEEEc-ccHhHHHHHHHHHHCCC---eEEEEe-CCc-cchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHh
Q 022909 72 GRIGFLG-MGIMGTPMAQNLLKAGC---DVTVWN-RTK-SKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVA 145 (290)
Q Consensus 72 ~~IgiiG-~G~iG~~la~~l~~~g~---~V~~~d-~~~-~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~ 145 (290)
++|+||| .|..|+.+.+.|..+.+ ++.... ++. .+.-.+........+..++.++++|+|+.|+|.. ..+...
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~-~s~~~a 80 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSA-MSKVQA 80 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHH-HHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChH-HHHHHH
Confidence 6899999 79999999999998754 344443 221 1110111100111101123357899999999853 333333
Q ss_pred cccccccccCCCCCEEEEecCC
Q 022909 146 CGKHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~lin~s~~ 167 (290)
-...+.|..+||.|..
T Consensus 81 ------~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 81 ------PRFAAAGVTVIDNSSA 96 (344)
T ss_dssp ------HHHHHTTCEEEECSST
T ss_pred ------HHHHhCCCEEEECCCc
Confidence 1224568899999763
No 444
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=96.46 E-value=0.0095 Score=49.63 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=34.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|.+.|++|++.+|++++.+.+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~ 45 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF 45 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 68888888 59999999999999999999999988765543
No 445
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.45 E-value=0.0045 Score=54.34 Aligned_cols=45 Identities=20% Similarity=0.154 Sum_probs=39.8
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA 115 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~ 115 (290)
+.+|.|+| .|.+|...++.++..|.+|++.++++++.+.+++.|.
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 194 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA 194 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 68999999 8999999999999999999999999888776666554
No 446
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.44 E-value=0.0028 Score=53.93 Aligned_cols=64 Identities=16% Similarity=0.283 Sum_probs=47.8
Q ss_pred eEEEEcc-cHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhCCCcc-------CCCHHHHhhcCCeEEEEeC
Q 022909 73 RIGFLGM-GIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISLGAKY-------QPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 73 ~IgiiG~-G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~g~~~-------~~~~~~~~~~aDivv~~~p 136 (290)
+|.|.|. |.||+.+++.|... |++|.+.+|++++.+.+...++.. .+++.++++++|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4789995 99999999999988 999999999887665544433321 1235567788999987654
No 447
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=96.44 E-value=0.0042 Score=52.50 Aligned_cols=40 Identities=20% Similarity=0.172 Sum_probs=34.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|...|++|++.+|++++.+..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 69 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV 69 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 68888888 59999999999999999999999998765544
No 448
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=96.44 E-value=0.003 Score=54.39 Aligned_cols=66 Identities=23% Similarity=0.185 Sum_probs=46.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHC--CCeEEEEeCCccchhhHHhC-----CCccCCCHHHHhh--cCCeEEEEeC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKA--GCDVTVWNRTKSKCDPLISL-----GAKYQPSPDEVAA--SCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~--g~~V~~~d~~~~~~~~~~~~-----g~~~~~~~~~~~~--~aDivv~~~p 136 (290)
+|+|.|.|. |.||+.+++.|... |++|++.+|++.+....... .+....+++++++ ..|+||.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 77 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAA 77 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence 588999996 99999999999988 89999999987653211111 1111123455666 7899887754
No 449
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.44 E-value=0.0028 Score=55.91 Aligned_cols=87 Identities=17% Similarity=0.144 Sum_probs=57.1
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC----CCHHHHhh------cCCeEEEEeCChh
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ----PSPDEVAA------SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~----~~~~~~~~------~aDivv~~~p~~~ 139 (290)
+.+|.|+|+ |.+|...++.++..|.+|++.++++++.+.+++.|...+ .+..+.+. ..|+|+.++.. +
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~-~ 238 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG-P 238 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch-h
Confidence 689999998 999999999999999999999999888777666554321 22222221 35677666543 2
Q ss_pred HHHHHhcccccccccCCCCCEEEEec
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
.... .++.++++..++.++
T Consensus 239 ~~~~-------~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 AFDD-------AVRTLASEGRLLVVG 257 (342)
T ss_dssp CHHH-------HHHTEEEEEEEEEC-
T ss_pred HHHH-------HHHhhcCCCEEEEEE
Confidence 2222 234556666666554
No 450
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.43 E-value=0.0035 Score=55.66 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=58.9
Q ss_pred CeEEEEcccHhHHHH-HHHH-HHCCCe-EEEEeCCcc---chhhHHhCCCccC----CCHHHHhh----cCCeEEEEeCC
Q 022909 72 GRIGFLGMGIMGTPM-AQNL-LKAGCD-VTVWNRTKS---KCDPLISLGAKYQ----PSPDEVAA----SCDVTFAMLAD 137 (290)
Q Consensus 72 ~~IgiiG~G~iG~~l-a~~l-~~~g~~-V~~~d~~~~---~~~~~~~~g~~~~----~~~~~~~~----~aDivv~~~p~ 137 (290)
.+|.|+|+|.+|... ++.+ +..|.+ |++.+++++ +.+.+++.|...+ .+..+ +. ..|+|+-++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEATGF 252 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEECSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEECCCC
Confidence 899999999999999 9998 888997 999999988 7777777776432 12222 22 36777777654
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEec
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
+...... ++.++++..++.++
T Consensus 253 ~~~~~~~-------~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 253 PKHAIQS-------VQALAPNGVGALLG 273 (357)
T ss_dssp HHHHHHH-------HHHEEEEEEEEECC
T ss_pred hHHHHHH-------HHHHhcCCEEEEEe
Confidence 3333322 34455666666654
No 451
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=96.43 E-value=0.012 Score=48.93 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=34.7
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. |.||+++++.|...|++|.+.+|++++.+..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~ 43 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ 43 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 578889984 8999999999999999999999998765544
No 452
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.42 E-value=0.0033 Score=55.51 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=39.9
Q ss_pred CCeEEEE-cccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCC
Q 022909 71 PGRIGFL-GMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGA 115 (290)
Q Consensus 71 ~~~Igii-G~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~ 115 (290)
+.+|.|+ |.|.+|...++.++..|.+|++.++++++.+.+++.|.
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 196 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA 196 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 7899999 69999999999999999999999999888777766554
No 453
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=96.42 E-value=0.0043 Score=52.46 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=35.1
Q ss_pred CCeEEEEcc-c-HhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-G-IMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G-~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. | .||+++++.|...|++|++.+|+.++.+..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 63 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGET 63 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHH
Confidence 789999998 8 599999999999999999999997765543
No 454
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=96.41 E-value=0.0087 Score=50.50 Aligned_cols=41 Identities=15% Similarity=0.147 Sum_probs=35.4
Q ss_pred CCeEEEEccc---HhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLGMG---IMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG~G---~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
+|++.|-|.+ -||+++|+.|++.|.+|.+.+|+++..+++.
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~ 49 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE 49 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 7899999974 5999999999999999999999987665543
No 455
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=96.41 E-value=0.0098 Score=50.74 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=35.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
++++.|.| .|.||+++++.|++.|++|.+.+|++++.+.+.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 73 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA 73 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 68899998 599999999999999999999999987665543
No 456
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=96.40 E-value=0.0084 Score=50.15 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=35.0
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. |.||+++++.|.+.|++|++.+|++++.+.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 49 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV 49 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 688889985 9999999999999999999999988765544
No 457
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.39 E-value=0.0043 Score=54.28 Aligned_cols=88 Identities=16% Similarity=0.142 Sum_probs=60.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh------cCCeEEEEeCCh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA------SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDivv~~~p~~ 138 (290)
+.+|.|+| .|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+..+.+. ..|+|+.++..
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 219 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ- 219 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh-
Confidence 68999999 7999999999999999999999999888777766554211 12222221 36777777643
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
..... .++.++++..++.++.
T Consensus 220 ~~~~~-------~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 DTWLT-------SLDSVAPRGLVVSFGN 240 (325)
T ss_dssp GGHHH-------HHTTEEEEEEEEECCC
T ss_pred HHHHH-------HHHHhcCCCEEEEEec
Confidence 32222 2456677777777653
No 458
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.0047 Score=54.01 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=38.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG 114 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g 114 (290)
+++|.|+| .|.||..+++.++..|.+|++.++++++.+.+++.|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g 185 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG 185 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 68999999 799999999999999999999999987766665544
No 459
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=96.39 E-value=0.0046 Score=52.32 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=34.8
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|.+.|++|.+.+|++++.+..
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 50 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDAC 50 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 68888888 59999999999999999999999998765543
No 460
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.38 E-value=0.011 Score=53.94 Aligned_cols=88 Identities=16% Similarity=0.069 Sum_probs=63.6
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCH------------------------HHH-
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSP------------------------DEV- 124 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~------------------------~~~- 124 (290)
+.+|.|+|+ |.||...++.++..|.+|++.++++++.+.+++.|...+-+. +++
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVV 300 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHH
Confidence 689999998 999999999999999999999999888877777765422111 111
Q ss_pred --h-hcCCeEEEEeCChhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 125 --A-ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 125 --~-~~aDivv~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
. ...|+|+.++.. .... ..+..++++..+++++.
T Consensus 301 ~~~g~g~Dvvid~~G~-~~~~-------~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 301 EKAGREPDIVFEHTGR-VTFG-------LSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHSSCCSEEEECSCH-HHHH-------HHHHHSCTTCEEEESCC
T ss_pred HHhCCCceEEEECCCc-hHHH-------HHHHHHhcCCEEEEEec
Confidence 1 247999988753 3222 23566788888888764
No 461
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=96.38 E-value=0.0069 Score=51.24 Aligned_cols=40 Identities=20% Similarity=0.336 Sum_probs=34.8
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. |.||+++++.|.+.|++|.+.+|++++.+..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 51 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDV 51 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH
Confidence 688889985 8899999999999999999999987765544
No 462
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.37 E-value=0.012 Score=53.52 Aligned_cols=66 Identities=12% Similarity=0.125 Sum_probs=43.9
Q ss_pred CCeEEEEcccHh-HHHHHHHHHH----C-CCeEEEEeCCccchhhHHh-------C--CCccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMGIM-GTPMAQNLLK----A-GCDVTVWNRTKSKCDPLIS-------L--GAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G~i-G~~la~~l~~----~-g~~V~~~d~~~~~~~~~~~-------~--g~~~~~~~~~~~~~aDivv~~~ 135 (290)
.+||+|||.|.+ +..+...|.. . +.+|.++|.++++.+.... . .+..+.+..+.+++||+|+++.
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcC
Confidence 589999999985 2222223333 2 5689999999876443211 1 1233467778899999999998
Q ss_pred C
Q 022909 136 A 136 (290)
Q Consensus 136 p 136 (290)
-
T Consensus 82 g 82 (417)
T 1up7_A 82 R 82 (417)
T ss_dssp C
T ss_pred C
Confidence 4
No 463
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.37 E-value=0.006 Score=53.68 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=60.1
Q ss_pred CCeEEEEccc-HhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh------cCCeEEEEeCCh
Q 022909 71 PGRIGFLGMG-IMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA------SCDVTFAMLADP 138 (290)
Q Consensus 71 ~~~IgiiG~G-~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDivv~~~p~~ 138 (290)
+.+|.|+|+| .+|...++.++..|.+|++.++++++.+.+++.|...+ .+..+.+. ..|+|+.++..
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 223 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG- 223 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH-
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC-
Confidence 6899999987 99999999999999999999999988877776554321 12222221 36777776643
Q ss_pred hHHHHHhcccccccccCCCCCEEEEecC
Q 022909 139 ESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
..+... ++.++++..++.++.
T Consensus 224 ~~~~~~-------~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 PDGNEL-------AFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHHHHH-------HHTEEEEEEEEECCC
T ss_pred hhHHHH-------HHHhcCCCEEEEEee
Confidence 333222 245666667776653
No 464
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=96.37 E-value=0.01 Score=50.50 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=33.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP 109 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~ 109 (290)
++++.|.| .|.||+++++.|...|++|.+.+|++++.+.
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 61 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRT 61 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 67888888 5999999999999999999999998765443
No 465
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.36 E-value=0.0038 Score=58.31 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=48.3
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p 136 (290)
+|+|.|.| +|.||+.+++.|...|++|++.+|++.+.+... ....+...++++++|+||.+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~---~d~~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF---WDPLNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEE---CCTTSCCTTTTTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcccee---ecccchhHHhcCCCCEEEECCC
Confidence 58999999 699999999999999999999999876543211 1112345567788999987654
No 466
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=96.36 E-value=0.0099 Score=50.25 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=34.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP 109 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~ 109 (290)
++++.|.| .|.||+++++.|.+.|++|.+.+|++++.+.
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 52 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEA 52 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 68888888 5999999999999999999999998765544
No 467
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=96.35 E-value=0.0035 Score=50.52 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=41.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhc---CCeEEEEe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAAS---CDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~---aDivv~~~ 135 (290)
+|+|.|.| .|.||+.+++.|. .|++|++.+|+++.. ...+...+++++++++ .|+||.+.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~----~~D~~~~~~~~~~~~~~~~~d~vi~~a 66 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDV----TVDITNIDSIKKMYEQVGKVDAIVSAT 66 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSE----ECCTTCHHHHHHHHHHHCCEEEEEECC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccce----eeecCCHHHHHHHHHHhCCCCEEEECC
Confidence 35899998 5999999999999 999999999986411 1112111234445544 68887764
No 468
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.34 E-value=0.0036 Score=55.32 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCeEEEEccc-HhHHHHHHHHHHC-CCeEEEEeCCccchhhHHhCCCccC-----CC----HHHHh--hcCCeEEEEeCC
Q 022909 71 PGRIGFLGMG-IMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLISLGAKYQ-----PS----PDEVA--ASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G-~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~~g~~~~-----~~----~~~~~--~~aDivv~~~p~ 137 (290)
+++|.|+|.| .+|..+++.++.. |.+|++.++++++.+.+++.|.... .+ ..++. ...|+|+.++..
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS 250 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCCC
Confidence 6899999998 9999999999998 9999999999887776665554211 12 12222 246888877754
Q ss_pred hhHHHHHhcccccccccCCCCCEEEEecC
Q 022909 138 PESAMDVACGKHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~lin~s~ 166 (290)
+... +..++.++++..++.++.
T Consensus 251 ~~~~-------~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 251 EKTL-------SVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HHHH-------TTGGGGEEEEEEEEECCS
T ss_pred HHHH-------HHHHHHHhcCCEEEEECC
Confidence 3222 233566777777777653
No 469
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=96.33 E-value=0.0074 Score=50.71 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=33.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP 109 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~ 109 (290)
++++.|.| .|.||+++++.|...|++|.+.+|++++.+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 41 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA 41 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 57888998 5999999999999999999999998765544
No 470
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=96.33 E-value=0.0099 Score=51.85 Aligned_cols=65 Identities=20% Similarity=0.279 Sum_probs=47.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH---h------------CCCccCCCHHHHhhcCCeEEEE
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI---S------------LGAKYQPSPDEVAASCDVTFAM 134 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~---~------------~g~~~~~~~~~~~~~aDivv~~ 134 (290)
+++|.|.| +|.||+.+++.|...|++|.+..|+++...... + ..+....+++++++++|+|+-+
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 84 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHV 84 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence 68899999 799999999999999999999888865322111 0 1122234567788889988764
Q ss_pred e
Q 022909 135 L 135 (290)
Q Consensus 135 ~ 135 (290)
.
T Consensus 85 A 85 (337)
T 2c29_D 85 A 85 (337)
T ss_dssp C
T ss_pred c
Confidence 4
No 471
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=96.33 E-value=0.01 Score=50.00 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=34.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|.+.|++|.+.+|+.++.++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 48 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA 48 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 68899998 59999999999999999999999987765544
No 472
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.32 E-value=0.01 Score=53.73 Aligned_cols=107 Identities=16% Similarity=0.182 Sum_probs=68.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEE-EEeCC----------ccchhhHHh-CC------CccCCCHHHHhh-cCCeE
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVT-VWNRT----------KSKCDPLIS-LG------AKYQPSPDEVAA-SCDVT 131 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~-~~d~~----------~~~~~~~~~-~g------~~~~~~~~~~~~-~aDiv 131 (290)
++||.|-|+|++|+..++.|...|.+|+ +.|.+ .+.+.++++ .| .... +.++++. +|||+
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~-~~~~i~~~~~DIl 299 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVI-TNEELLEKDCDIL 299 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCB-CHHHHHHSCCSEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEe-cCccceeccccEE
Confidence 7999999999999999999999999874 66765 222222222 12 2222 4456554 69999
Q ss_pred EEEeCChhHHHHHhcccccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEe
Q 022909 132 FAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 188 (290)
Q Consensus 132 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~ 188 (290)
+-|... +.+ +.+..+.+ .-.+|+-.+.++. + .+..+.|.++|+.|+.
T Consensus 300 iPcA~~-----n~I--~~~~a~~l-~ak~V~EgAN~p~-t-~eA~~iL~~rGI~~~P 346 (424)
T 3k92_A 300 VPAAIS-----NQI--TAKNAHNI-QASIVVERANGPT-T-IDATKILNERGVLLVP 346 (424)
T ss_dssp EECSCS-----SCB--CTTTGGGC-CCSEEECCSSSCB-C-HHHHHHHHHTTCEEEC
T ss_pred eecCcc-----ccc--ChhhHhhc-CceEEEcCCCCCC-C-HHHHHHHHHCCCEEEC
Confidence 866543 334 33444455 3455665555553 3 4556788888887763
No 473
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=96.32 E-value=0.0068 Score=51.26 Aligned_cols=84 Identities=6% Similarity=0.009 Sum_probs=53.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEE--eCChhHHHHHhcc
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAM--LADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~--~p~~~~~~~~~~~ 147 (290)
+|++.|-| .+.||+++|+.|++.|.+|.+++|++++.++..+ ++.+. ..+++.+. +...++++.++
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~-------~i~~~--g~~~~~~~~Dvt~~~~v~~~~-- 75 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQ-------ELRGM--GKEVLGVKADVSKKKDVEEFV-- 75 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHHHT--TCCEEEEECCTTSHHHHHHHH--
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-------HHHhc--CCcEEEEEccCCCHHHHHHHH--
Confidence 78888887 4889999999999999999999999877655433 11111 12333322 33455666666
Q ss_pred cccccccCCCCCEEEEecC
Q 022909 148 KHGAASGMGPGKGYVDVST 166 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~ 166 (290)
++..+...+=.++||.+.
T Consensus 76 -~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 76 -RRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp -HHHHHHHSCCCEEEECCC
T ss_pred -HHHHHHcCCCCEEEECCc
Confidence 233343333346777653
No 474
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=96.31 E-value=0.007 Score=51.49 Aligned_cols=40 Identities=18% Similarity=0.132 Sum_probs=34.0
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|++.|++|++.+|++++.+..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 68 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGI 68 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 67777777 58999999999999999999999987665543
No 475
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.30 E-value=0.015 Score=50.80 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=50.8
Q ss_pred CCeEEEEccc--HhHHHHHHHHHHCCCeEEEEeCCccch-----hhHH----hCC--CccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMG--IMGTPMAQNLLKAGCDVTVWNRTKSKC-----DPLI----SLG--AKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G--~iG~~la~~l~~~g~~V~~~d~~~~~~-----~~~~----~~g--~~~~~~~~~~~~~aDivv~~~ 135 (290)
+.+|+++|-| ++..+++..+..+|++|.+..+..-.. +.++ +.| +..+.+++++++++|+|..-+
T Consensus 167 gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~ 244 (325)
T 1vlv_A 167 GVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 244 (325)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEecc
Confidence 7999999985 999999999999999999998753211 1111 345 455789999999999998743
No 476
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=96.29 E-value=0.0085 Score=50.34 Aligned_cols=41 Identities=22% Similarity=0.399 Sum_probs=35.7
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
++++.|.| .|.||+++++.|...|++|.+.+|++++.+...
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV 48 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 68888888 589999999999999999999999987766543
No 477
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.29 E-value=0.0037 Score=56.34 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=40.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCC-eEEEEeCCccchhhHHhCCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGC-DVTVWNRTKSKCDPLISLGAK 116 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~-~V~~~d~~~~~~~~~~~~g~~ 116 (290)
+.+|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|..
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE 232 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence 6899999999999999999999998 899999998887777666653
No 478
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.29 E-value=0.0044 Score=51.07 Aligned_cols=34 Identities=32% Similarity=0.573 Sum_probs=31.4
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCc
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~ 104 (290)
...|.|||+|.-|...|..|+..|++|+++++.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3569999999999999999999999999999865
No 479
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=96.28 E-value=0.0079 Score=51.74 Aligned_cols=66 Identities=15% Similarity=-0.011 Sum_probs=53.9
Q ss_pred CCeEEEEcc---cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGM---GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~---G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~ 137 (290)
+.+|+++|- +++..+++..+..+|++|.+..+..-..+.+.+.|+..+.+++++++++|+|.. +-.
T Consensus 146 gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 146 DLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp TCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 799999997 899999999999999999999875322222334567778899999999999998 543
No 480
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.27 E-value=0.011 Score=51.27 Aligned_cols=65 Identities=22% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCeEEEEccc--HhHHHHHHHHHHCCCeEEEEeCCccch-----hhHH----hCC--CccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLGMG--IMGTPMAQNLLKAGCDVTVWNRTKSKC-----DPLI----SLG--AKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG~G--~iG~~la~~l~~~g~~V~~~d~~~~~~-----~~~~----~~g--~~~~~~~~~~~~~aDivv~~~ 135 (290)
+.+|+++|-| ++..+++..+..+|++|.+..+..-.. +.++ +.| +..+.+++++++++|+|..-.
T Consensus 148 gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 148 GLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence 7899999985 999999999999999999998753211 1111 334 455789999999999998744
No 481
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=96.26 E-value=0.0067 Score=52.07 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=36.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS 112 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~ 112 (290)
++++.|.| .|.||+++++.|+..|++|++.+|++++.+...+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~ 58 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 78899998 4999999999999999999999999877665543
No 482
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=96.26 E-value=0.018 Score=47.53 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=57.6
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEE-EEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhccc
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVT-VWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACGK 148 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~~ 148 (290)
.|+.+|+|+ |+||+.+++.....|+++. .+|+... ++ ++++|++|=-. .|..+...+
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~-------------~~----l~~~DVvIDFT-~P~a~~~~~--- 70 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-------------EE----LDSPDVVIDFS-SPEALPKTV--- 70 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-------------EE----CSCCSEEEECS-CGGGHHHHH---
T ss_pred cceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc-------------cc----ccCCCEEEECC-CHHHHHHHH---
Confidence 589999997 9999999988777888755 5665431 11 13689877332 334444443
Q ss_pred ccccccCCCCCEEEEecCCChhHHHHHHHHHHHcCCcEEeCccCC
Q 022909 149 HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG 193 (290)
Q Consensus 149 ~~~~~~~~~~~~lin~s~~~~~~~~~l~~~l~~~~~~~~~~p~~~ 193 (290)
....+.+.-+|-.++|-.....+..+.+.++ +.++-+|++.
T Consensus 71 ---~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~-~~vv~apNfS 111 (228)
T 1vm6_A 71 ---DLCKKYRAGLVLGTTALKEEHLQMLRELSKE-VPVVQAYNFS 111 (228)
T ss_dssp ---HHHHHHTCEEEECCCSCCHHHHHHHHHHTTT-SEEEECSCCC
T ss_pred ---HHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh-CCEEEecccc
Confidence 1223345555544454444333344444333 6677677664
No 483
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=96.25 E-value=0.0036 Score=54.21 Aligned_cols=65 Identities=23% Similarity=0.233 Sum_probs=44.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH----HhCCCccCCCHHHHhhc--CCeEEEEeC
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL----ISLGAKYQPSPDEVAAS--CDVTFAMLA 136 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~----~~~g~~~~~~~~~~~~~--aDivv~~~p 136 (290)
.++|.|.| .|.||+.+++.|...|++|++.+|++.. +.+ ....+....+++++++. .|+||.+..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 58899998 5999999999999999999999998654 211 00111111234556665 899887754
No 484
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.24 E-value=0.0094 Score=52.49 Aligned_cols=88 Identities=11% Similarity=0.094 Sum_probs=57.9
Q ss_pred CCeEEEEcccHhHHHHHHHHHHC-CCeEEEEeCCccchhhHHhCCCccC----CCHHHHh----h--cCCeEEEEeCChh
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKA-GCDVTVWNRTKSKCDPLISLGAKYQ----PSPDEVA----A--SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~-g~~V~~~d~~~~~~~~~~~~g~~~~----~~~~~~~----~--~aDivv~~~p~~~ 139 (290)
+.+|.|+|+|.+|...++.++.. |.+|++.++++++.+.+++.|...+ ++..+.+ . ..|+|+-++..+.
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~~ 251 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQS 251 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCHH
Confidence 68999999999999999999887 7899999999988887777665321 1121111 1 3567776665433
Q ss_pred HHHHHhcccccccccCCCCCEEEEec
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
..... ++.++++..++.++
T Consensus 252 ~~~~~-------~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 252 TIDTA-------QQVVAVDGHISVVG 270 (345)
T ss_dssp HHHHH-------HHHEEEEEEEEECS
T ss_pred HHHHH-------HHHHhcCCEEEEEC
Confidence 33222 33445555555553
No 485
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=96.24 E-value=0.01 Score=49.43 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=35.1
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.|. |.||+++++.|...|++|.+.+|++++.+..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 54 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEV 54 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHH
Confidence 688889985 9999999999999999999999998765544
No 486
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=96.24 E-value=0.022 Score=47.89 Aligned_cols=86 Identities=14% Similarity=0.021 Sum_probs=51.8
Q ss_pred CCeEEEEcc---cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccCCCHHHHhhcCCeEEEEeCChhHHHHHhcc
Q 022909 71 PGRIGFLGM---GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQPSPDEVAASCDVTFAMLADPESAMDVACG 147 (290)
Q Consensus 71 ~~~IgiiG~---G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDivv~~~p~~~~~~~~~~~ 147 (290)
+++|.|.|. |.||+++++.|.+.|++|.+.+|+....+.+.+ +.+......++..=+....+++.++
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~-- 83 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE--------FAAEFGSELVFPCDVADDAQIDALF-- 83 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------HHHHTTCCCEEECCTTCHHHHHHHH--
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHH--------HHHHcCCcEEEECCCCCHHHHHHHH--
Confidence 799999995 689999999999999999999998543333222 1111112233332233455566665
Q ss_pred cccccccCCCCCEEEEecCC
Q 022909 148 KHGAASGMGPGKGYVDVSTV 167 (290)
Q Consensus 148 ~~~~~~~~~~~~~lin~s~~ 167 (290)
+++.+...+=.++||.+..
T Consensus 84 -~~~~~~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 84 -ASLKTHWDSLDGLVHSIGF 102 (271)
T ss_dssp -HHHHHHCSCEEEEEECCCC
T ss_pred -HHHHHHcCCCCEEEECCcc
Confidence 2233333333466776643
No 487
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.24 E-value=0.0077 Score=53.31 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=59.7
Q ss_pred CCeEEEE-cccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCCCccC-----CCHHHHhh-----cCCeEEEEeCChh
Q 022909 71 PGRIGFL-GMGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLGAKYQ-----PSPDEVAA-----SCDVTFAMLADPE 139 (290)
Q Consensus 71 ~~~Igii-G~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~~~~~-----~aDivv~~~p~~~ 139 (290)
+.+|.|+ |.|.+|...++.++..|.+|++.++++++.+.+++.|...+ .+..+.+. ..|+|+.++.. +
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~ 246 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA-A 246 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-G
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-H
Confidence 6899999 68999999999999999999999999988777766554321 12223222 36777777643 2
Q ss_pred HHHHHhcccccccccCCCCCEEEEec
Q 022909 140 SAMDVACGKHGAASGMGPGKGYVDVS 165 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~lin~s 165 (290)
.... .++.++++..++.++
T Consensus 247 ~~~~-------~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 247 YFER-------NIASLAKDGCLSIIA 265 (353)
T ss_dssp GHHH-------HHHTEEEEEEEEECC
T ss_pred HHHH-------HHHHhccCCEEEEEE
Confidence 2222 244566666666665
No 488
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=96.23 E-value=0.0046 Score=52.10 Aligned_cols=41 Identities=29% Similarity=0.290 Sum_probs=35.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHH
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLI 111 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~ 111 (290)
++++.|.|. |.||+++++.|.+.|++|.+.+|++++.++..
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 47 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK 47 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 688888884 89999999999999999999999987665543
No 489
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.23 E-value=0.005 Score=54.29 Aligned_cols=44 Identities=14% Similarity=0.044 Sum_probs=38.3
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCCeEEEEeCCccchhhHHhCC
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLISLG 114 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~~g 114 (290)
+++|.|+|. |.+|..+++.++..|.+|++.++++++.+.+++.|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g 211 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG 211 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC
Confidence 689999998 99999999999999999999999987766655444
No 490
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=96.23 E-value=0.01 Score=49.65 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=35.8
Q ss_pred CCCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh
Q 022909 70 LPGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS 112 (290)
Q Consensus 70 ~~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~ 112 (290)
|++++.|.| .|.||+++++.|.+.|++|.+.+|++++.++..+
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 368889998 4899999999999999999999999876655443
No 491
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.23 E-value=0.0061 Score=53.90 Aligned_cols=66 Identities=9% Similarity=0.128 Sum_probs=47.4
Q ss_pred CCeEEEEcc-cHhHHHHHHHHHHCCC-------eEEEEeCCccch--h----hHHhC------CCccCCCHHHHhhcCCe
Q 022909 71 PGRIGFLGM-GIMGTPMAQNLLKAGC-------DVTVWNRTKSKC--D----PLISL------GAKYQPSPDEVAASCDV 130 (290)
Q Consensus 71 ~~~IgiiG~-G~iG~~la~~l~~~g~-------~V~~~d~~~~~~--~----~~~~~------g~~~~~~~~~~~~~aDi 130 (290)
..||.|+|+ |.||+.++-+|+.... ++.++|..+... + ++... .+...++..+.+++||+
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~adv 103 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAI 103 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCE
Confidence 469999996 9999999999987433 789999875321 1 12221 12344678888999999
Q ss_pred EEEEeC
Q 022909 131 TFAMLA 136 (290)
Q Consensus 131 vv~~~p 136 (290)
||++--
T Consensus 104 Vvi~aG 109 (345)
T 4h7p_A 104 AIMCGA 109 (345)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998753
No 492
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=96.23 E-value=0.0074 Score=51.56 Aligned_cols=40 Identities=20% Similarity=0.212 Sum_probs=34.5
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|++.|++|++.+|++++.+..
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~ 69 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA 69 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 68888888 58999999999999999999999987665544
No 493
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.23 E-value=0.0072 Score=55.62 Aligned_cols=67 Identities=22% Similarity=0.144 Sum_probs=46.8
Q ss_pred CCeEEEEcccHhHHHHHHHHHHCCCeEEEEeCCccc-hhhHHh-CCCccC--CCHHHHhhcCCeEEEEeCC
Q 022909 71 PGRIGFLGMGIMGTPMAQNLLKAGCDVTVWNRTKSK-CDPLIS-LGAKYQ--PSPDEVAASCDVTFAMLAD 137 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~la~~l~~~g~~V~~~d~~~~~-~~~~~~-~g~~~~--~~~~~~~~~aDivv~~~p~ 137 (290)
+++|.|||.|.+|..-++.|...|.+|+++++.... ...+.+ .++... .-.++.+.++|+|+.+...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~ 82 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDD 82 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCC
Confidence 799999999999999999999999999999986432 222222 223221 1112346788988877544
No 494
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=96.22 E-value=0.0018 Score=54.87 Aligned_cols=65 Identities=14% Similarity=0.082 Sum_probs=46.9
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhHHh----CCCccCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPLIS----LGAKYQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~~~----~g~~~~~~~~~~~~~aDivv~~~ 135 (290)
+++|.|.| .|.||+.+++.|...|++|.+.+|++.+...... ..+.-.+++++++++.|+||.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A 72 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLG 72 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence 47899998 6999999999999999999999998765331000 11221224566778899988764
No 495
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=96.21 E-value=0.015 Score=49.23 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=34.6
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|.+.|++|.+.+|+.++.++.
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~ 67 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI 67 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 68888888 58999999999999999999999987665543
No 496
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=96.21 E-value=0.0066 Score=53.16 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=45.4
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHC--CCeEEEEeCCccc--hhhHHh---CCCc-------cCCCHHHHhhcCCeEEEEe
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKA--GCDVTVWNRTKSK--CDPLIS---LGAK-------YQPSPDEVAASCDVTFAML 135 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~--g~~V~~~d~~~~~--~~~~~~---~g~~-------~~~~~~~~~~~aDivv~~~ 135 (290)
+|+|.|.| .|.||+.+++.|... |++|++.+|++.. .+.+.+ .++. -..+++++++++|+||.+.
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 47899999 699999999999988 8999999986521 111111 1111 1123456777889888765
Q ss_pred C
Q 022909 136 A 136 (290)
Q Consensus 136 p 136 (290)
.
T Consensus 84 ~ 84 (348)
T 1oc2_A 84 A 84 (348)
T ss_dssp S
T ss_pred c
Confidence 4
No 497
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=96.20 E-value=0.017 Score=49.18 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCeEEEEcc-cH--hHHHHHHHHHHCCCeEEEEeCCc
Q 022909 71 PGRIGFLGM-GI--MGTPMAQNLLKAGCDVTVWNRTK 104 (290)
Q Consensus 71 ~~~IgiiG~-G~--iG~~la~~l~~~g~~V~~~d~~~ 104 (290)
++++.|.|. |. ||+++++.|...|++|.+.+|+.
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 688999985 55 99999999999999999999987
No 498
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.20 E-value=0.0068 Score=56.36 Aligned_cols=114 Identities=17% Similarity=0.196 Sum_probs=68.8
Q ss_pred CCeEEEEcccHhHHH-HHHHHHHCCCeEEEEeCCccc-hhhHHhCCCccCC-CHHHHhhcCCeEEEE--eCC-hhHHHHH
Q 022909 71 PGRIGFLGMGIMGTP-MAQNLLKAGCDVTVWNRTKSK-CDPLISLGAKYQP-SPDEVAASCDVTFAM--LAD-PESAMDV 144 (290)
Q Consensus 71 ~~~IgiiG~G~iG~~-la~~l~~~g~~V~~~d~~~~~-~~~~~~~g~~~~~-~~~~~~~~aDivv~~--~p~-~~~~~~~ 144 (290)
.++|.|||.|..|.+ +|+.|...|++|.++|..... .+.+++.|+.... ...+.+.++|+||+. +|. ++.....
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 589999999999996 999999999999999976433 3456666765432 223346789999876 332 2232222
Q ss_pred hc------cccccccc-CCCCCEE-EEecCCChhHHHHHHHHHHHcCC
Q 022909 145 AC------GKHGAASG-MGPGKGY-VDVSTVDGDTSKLINGHIKATGA 184 (290)
Q Consensus 145 ~~------~~~~~~~~-~~~~~~l-in~s~~~~~~~~~l~~~l~~~~~ 184 (290)
.. ...+++.. ++...++ |-=|.|+..+..-+...|+..+.
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 149 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL 149 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 10 00122222 3332233 32234555566666677777664
No 499
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=96.20 E-value=0.0095 Score=51.26 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=34.2
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhh
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDP 109 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~ 109 (290)
+++|.|.| .|.||+++++.|...|++|++.+|++++.+.
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~ 57 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKS 57 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 68899998 5999999999999999999999998765543
No 500
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=96.19 E-value=0.0097 Score=49.77 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=34.6
Q ss_pred CCeEEEEc-ccHhHHHHHHHHHHCCCeEEEEeCCccchhhH
Q 022909 71 PGRIGFLG-MGIMGTPMAQNLLKAGCDVTVWNRTKSKCDPL 110 (290)
Q Consensus 71 ~~~IgiiG-~G~iG~~la~~l~~~g~~V~~~d~~~~~~~~~ 110 (290)
++++.|.| .|.||+++++.|...|++|.+.+|++++.+.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 47 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRAL 47 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 68899998 59999999999999999999999987655443
Done!