Query 022910
Match_columns 290
No_of_seqs 590 out of 3556
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 13:10:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 2.4E-45 8.3E-50 299.7 35.3 234 54-290 3-240 (304)
2 1vyh_C Platelet-activating fac 100.0 8.5E-45 2.9E-49 308.4 35.3 233 54-290 98-350 (410)
3 3ow8_A WD repeat-containing pr 100.0 8.3E-45 2.8E-49 298.7 34.1 231 56-290 72-302 (321)
4 1vyh_C Platelet-activating fac 100.0 1.8E-44 6.2E-49 306.4 34.4 234 53-290 139-392 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 1.7E-43 5.8E-48 293.2 37.5 237 52-290 43-324 (340)
6 2pbi_B Guanine nucleotide-bind 100.0 3.2E-43 1.1E-47 293.1 37.7 237 52-290 52-338 (354)
7 3ow8_A WD repeat-containing pr 100.0 1.1E-43 3.6E-48 292.1 33.3 237 51-290 19-260 (321)
8 2ynn_A Coatomer subunit beta'; 100.0 3.8E-43 1.3E-47 286.7 34.3 233 54-290 45-282 (304)
9 3frx_A Guanine nucleotide-bind 100.0 5.8E-43 2E-47 287.5 35.4 232 54-290 7-249 (319)
10 4gqb_B Methylosome protein 50; 100.0 2.5E-43 8.4E-48 292.3 32.2 226 59-290 77-311 (344)
11 3iz6_a 40S ribosomal protein R 100.0 4.3E-42 1.5E-46 289.0 31.0 237 53-290 55-356 (380)
12 4ery_A WD repeat-containing pr 100.0 5.5E-41 1.9E-45 274.7 34.3 226 53-281 12-237 (312)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-41 7.5E-46 281.1 32.3 233 54-290 5-264 (345)
14 4ery_A WD repeat-containing pr 100.0 1.4E-40 4.9E-45 272.3 36.5 236 54-290 55-291 (312)
15 2xzm_R RACK1; ribosome, transl 100.0 3.5E-41 1.2E-45 279.7 33.1 234 52-290 9-267 (343)
16 2pm7_B Protein transport prote 100.0 5.4E-41 1.9E-45 273.1 32.6 230 57-290 2-266 (297)
17 2hes_X YDR267CP; beta-propelle 100.0 6.4E-41 2.2E-45 276.6 32.9 231 54-290 4-262 (330)
18 3frx_A Guanine nucleotide-bind 100.0 4E-40 1.4E-44 270.6 35.6 230 54-290 55-298 (319)
19 4g56_B MGC81050 protein; prote 100.0 6.1E-41 2.1E-45 279.6 28.8 228 55-288 85-321 (357)
20 1nr0_A Actin interacting prote 100.0 4.1E-40 1.4E-44 293.0 33.7 234 54-290 49-336 (611)
21 1erj_A Transcriptional repress 100.0 1.5E-39 5.1E-44 274.7 35.5 218 66-288 125-362 (393)
22 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-39 3.6E-44 271.0 32.2 228 60-290 57-315 (345)
23 4gqb_B Methylosome protein 50; 100.0 9.9E-40 3.4E-44 270.6 31.4 208 58-270 121-334 (344)
24 3bg1_A Protein SEC13 homolog; 100.0 9.2E-41 3.1E-45 274.1 23.7 233 57-290 6-274 (316)
25 1nr0_A Actin interacting prote 100.0 2.2E-39 7.4E-44 288.4 34.2 236 54-290 137-503 (611)
26 2xzm_R RACK1; ribosome, transl 100.0 3.7E-39 1.3E-43 267.5 33.3 229 54-290 66-321 (343)
27 1erj_A Transcriptional repress 100.0 4.8E-39 1.6E-43 271.6 34.4 227 61-290 61-322 (393)
28 3dwl_C Actin-related protein 2 100.0 2E-41 6.7E-46 284.3 19.3 228 58-290 5-263 (377)
29 3dm0_A Maltose-binding peripla 100.0 2.9E-39 1E-43 291.6 33.8 232 55-290 373-614 (694)
30 2hes_X YDR267CP; beta-propelle 100.0 4.3E-39 1.5E-43 265.7 32.0 228 57-288 49-305 (330)
31 3zwl_B Eukaryotic translation 100.0 4.8E-38 1.6E-42 262.1 37.6 231 54-290 22-327 (369)
32 2ymu_A WD-40 repeat protein; u 100.0 1.3E-38 4.3E-43 281.4 35.8 229 53-290 333-561 (577)
33 4g56_B MGC81050 protein; prote 100.0 6.2E-40 2.1E-44 273.5 25.9 230 58-290 36-281 (357)
34 3jrp_A Fusion protein of prote 100.0 5.5E-39 1.9E-43 268.9 31.3 232 55-290 2-268 (379)
35 3mmy_A MRNA export factor; mRN 100.0 1.1E-38 3.8E-43 265.8 32.1 240 50-290 25-327 (368)
36 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-38 3.7E-43 266.7 31.8 228 59-290 3-256 (372)
37 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-38 4.5E-43 263.1 31.3 233 56-290 3-318 (351)
38 1got_B GT-beta; complex (GTP-b 100.0 1.9E-38 6.3E-43 262.9 31.3 205 55-264 134-340 (340)
39 2xyi_A Probable histone-bindin 100.0 8.2E-39 2.8E-43 273.2 28.5 232 56-290 120-390 (430)
40 4aow_A Guanine nucleotide-bind 100.0 1.3E-37 4.6E-42 257.0 34.3 233 54-290 28-268 (340)
41 2pbi_B Guanine nucleotide-bind 100.0 6.3E-38 2.2E-42 261.1 32.3 206 55-264 145-354 (354)
42 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-38 3.6E-43 270.2 27.8 234 55-290 72-325 (402)
43 3mkq_A Coatomer beta'-subunit; 100.0 2.9E-38 1E-42 289.5 32.9 234 54-290 3-240 (814)
44 1gxr_A ESG1, transducin-like e 100.0 1.9E-37 6.5E-42 255.5 34.2 228 56-290 43-277 (337)
45 1gxr_A ESG1, transducin-like e 100.0 8.6E-37 2.9E-41 251.6 36.3 222 62-290 95-318 (337)
46 4e54_B DNA damage-binding prot 100.0 7.1E-39 2.4E-43 274.0 23.9 222 56-278 111-338 (435)
47 3ei3_B DNA damage-binding prot 100.0 1.4E-37 4.9E-42 261.5 31.2 219 53-277 62-292 (383)
48 1sq9_A Antiviral protein SKI8; 100.0 5.2E-38 1.8E-42 265.0 28.5 235 54-290 52-366 (397)
49 3dm0_A Maltose-binding peripla 100.0 2.7E-37 9.1E-42 278.8 34.3 231 54-290 420-674 (694)
50 2ymu_A WD-40 repeat protein; u 100.0 6.8E-37 2.3E-41 270.3 36.1 230 52-290 291-520 (577)
51 1sq9_A Antiviral protein SKI8; 100.0 4.6E-38 1.6E-42 265.3 26.7 232 55-290 7-303 (397)
52 1r5m_A SIR4-interacting protei 100.0 6.8E-37 2.3E-41 259.8 32.4 225 60-290 41-342 (425)
53 3i2n_A WD repeat-containing pr 100.0 1E-37 3.5E-42 259.2 26.5 234 53-290 7-271 (357)
54 3iz6_a 40S ribosomal protein R 100.0 6.7E-38 2.3E-42 263.4 25.3 216 54-269 147-377 (380)
55 3vl1_A 26S proteasome regulato 100.0 8.9E-38 3E-42 265.6 26.4 233 54-290 129-397 (420)
56 3sfz_A APAF-1, apoptotic pepti 100.0 1E-36 3.6E-41 290.8 36.4 236 54-290 605-894 (1249)
57 4aez_A CDC20, WD repeat-contai 100.0 1.8E-36 6.3E-41 256.4 32.5 229 55-290 124-361 (401)
58 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-36 9.1E-41 246.3 32.0 227 53-290 7-237 (313)
59 3k26_A Polycomb protein EED; W 100.0 1.2E-37 4E-42 259.6 24.3 223 63-290 68-347 (366)
60 4a11_B DNA excision repair pro 100.0 4.7E-36 1.6E-40 253.4 34.2 236 54-290 33-346 (408)
61 2pm7_B Protein transport prote 100.0 8.6E-37 2.9E-41 248.3 28.5 212 55-266 44-284 (297)
62 2pm9_A Protein WEB1, protein t 100.0 1.3E-37 4.5E-42 264.0 24.4 225 62-290 65-317 (416)
63 2j04_B YDR362CP, TAU91; beta p 100.0 7.8E-38 2.7E-42 271.9 23.3 205 58-266 201-427 (524)
64 1r5m_A SIR4-interacting protei 100.0 9.3E-37 3.2E-41 259.0 29.0 233 52-290 137-406 (425)
65 3vl1_A 26S proteasome regulato 100.0 5.5E-37 1.9E-41 260.7 27.5 220 66-288 99-345 (420)
66 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-36 4.7E-41 278.4 31.8 233 54-290 45-282 (814)
67 3gre_A Serine/threonine-protei 100.0 2E-37 6.7E-42 265.0 24.2 235 51-288 49-313 (437)
68 3i2n_A WD repeat-containing pr 100.0 9.4E-37 3.2E-41 253.4 27.3 230 60-290 61-333 (357)
69 2pm9_A Protein WEB1, protein t 100.0 1.5E-37 5.2E-42 263.7 21.9 213 55-270 104-340 (416)
70 3v7d_B Cell division control p 100.0 1.5E-35 5.2E-40 255.2 34.5 226 54-288 111-362 (464)
71 3jro_A Fusion protein of prote 100.0 2.6E-37 9E-42 280.8 24.6 230 57-290 2-266 (753)
72 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-36 1.3E-40 251.2 29.3 207 56-267 44-274 (372)
73 3ei3_B DNA damage-binding prot 100.0 5.3E-36 1.8E-40 251.9 29.3 225 61-290 115-364 (383)
74 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.4E-36 1.8E-40 257.3 29.7 231 57-289 95-365 (450)
75 2j04_B YDR362CP, TAU91; beta p 100.0 4.2E-37 1.5E-41 267.3 22.6 226 63-290 132-409 (524)
76 2oaj_A Protein SNI1; WD40 repe 100.0 6.9E-36 2.4E-40 275.5 31.9 226 58-288 11-281 (902)
77 3k26_A Polycomb protein EED; W 100.0 1.1E-36 3.8E-41 253.7 23.8 230 58-289 12-296 (366)
78 3odt_A Protein DOA1; ubiquitin 100.0 3.8E-35 1.3E-39 239.4 31.8 225 54-290 49-278 (313)
79 3dw8_B Serine/threonine-protei 100.0 1.5E-36 5.1E-41 260.0 23.8 225 63-290 27-354 (447)
80 4gga_A P55CDC, cell division c 100.0 1.3E-34 4.6E-39 246.4 35.5 224 60-290 143-376 (420)
81 3dwl_C Actin-related protein 2 100.0 8.8E-37 3E-41 256.0 21.6 206 55-266 46-280 (377)
82 1yfq_A Cell cycle arrest prote 100.0 4.3E-36 1.5E-40 248.2 24.6 225 58-290 5-263 (342)
83 3dw8_B Serine/threonine-protei 100.0 7.6E-36 2.6E-40 255.6 26.8 217 54-272 71-378 (447)
84 4aow_A Guanine nucleotide-bind 100.0 3.5E-34 1.2E-38 236.5 35.7 231 54-290 76-318 (340)
85 3bg1_A Protein SEC13 homolog; 100.0 1.4E-36 4.9E-41 249.1 21.1 221 56-279 49-308 (316)
86 3v7d_B Cell division control p 100.0 1.3E-34 4.4E-39 249.4 33.7 228 53-290 151-403 (464)
87 4h5i_A Guanine nucleotide-exch 100.0 3.3E-35 1.1E-39 245.7 27.6 200 63-267 132-343 (365)
88 4h5i_A Guanine nucleotide-exch 100.0 3.5E-35 1.2E-39 245.5 27.6 177 109-290 135-324 (365)
89 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-35 6.3E-40 250.3 25.9 222 66-290 36-279 (402)
90 4aez_A CDC20, WD repeat-contai 100.0 1E-34 3.4E-39 245.8 30.2 229 53-290 78-315 (401)
91 1yfq_A Cell cycle arrest prote 100.0 3.1E-35 1.1E-39 243.1 26.5 227 56-290 48-304 (342)
92 3gre_A Serine/threonine-protei 100.0 2.7E-35 9.4E-40 251.7 26.4 226 62-289 109-418 (437)
93 3f3f_A Nucleoporin SEH1; struc 100.0 1E-34 3.4E-39 239.8 28.1 217 55-274 48-344 (351)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-34 2.2E-38 243.9 33.0 226 54-290 189-419 (445)
95 3jrp_A Fusion protein of prote 100.0 2.2E-34 7.5E-39 240.9 29.3 216 54-269 45-289 (379)
96 4e54_B DNA damage-binding prot 100.0 2.6E-35 9E-40 251.9 23.7 235 55-290 155-412 (435)
97 1pgu_A Actin interacting prote 100.0 1.8E-34 6.2E-39 256.3 28.9 221 62-290 16-264 (615)
98 4gq1_A NUP37; propeller, trans 100.0 2.4E-35 8.3E-40 248.9 20.8 215 76-290 100-371 (393)
99 1p22_A F-BOX/WD-repeat protein 100.0 6.4E-34 2.2E-38 243.3 29.9 222 53-288 162-395 (435)
100 3sfz_A APAF-1, apoptotic pepti 100.0 9E-34 3.1E-38 270.6 33.7 209 53-265 646-911 (1249)
101 1p22_A F-BOX/WD-repeat protein 100.0 3.6E-33 1.2E-37 238.6 33.1 219 56-288 125-346 (435)
102 1pgu_A Actin interacting prote 100.0 4E-33 1.4E-37 247.6 34.3 230 55-287 54-307 (615)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.6E-34 2.6E-38 243.9 27.7 222 64-290 4-319 (450)
104 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.8E-33 1.6E-37 238.5 32.4 220 55-288 109-329 (445)
105 4ggc_A P55CDC, cell division c 100.0 2.1E-32 7E-37 223.8 33.4 230 54-290 55-296 (318)
106 2xyi_A Probable histone-bindin 100.0 2.4E-33 8.3E-38 239.4 28.3 212 54-268 171-411 (430)
107 3zwl_B Eukaryotic translation 100.0 1.3E-32 4.5E-37 229.1 31.6 213 53-271 63-350 (369)
108 4a11_B DNA excision repair pro 100.0 7.5E-33 2.5E-37 233.8 30.1 212 61-276 96-374 (408)
109 2j04_A TAU60, YPL007P, hypothe 100.0 3.3E-33 1.1E-37 239.0 25.1 217 61-290 12-279 (588)
110 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-32 5E-37 228.8 28.4 208 54-268 9-272 (355)
111 3lrv_A PRE-mRNA-splicing facto 100.0 2.9E-33 1E-37 232.0 22.4 201 64-269 76-294 (343)
112 2j04_A TAU60, YPL007P, hypothe 100.0 5.8E-33 2E-37 237.5 23.0 215 62-290 83-342 (588)
113 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-33 3.6E-38 234.6 17.6 207 76-290 47-272 (343)
114 2w18_A PALB2, fancn, partner a 100.0 2.2E-32 7.4E-37 220.6 23.7 175 86-265 156-355 (356)
115 3jro_A Fusion protein of prote 100.0 1.4E-32 4.7E-37 249.9 24.4 214 54-267 43-285 (753)
116 4gga_A P55CDC, cell division c 100.0 2.3E-31 7.7E-36 226.5 29.5 229 53-288 178-416 (420)
117 1l0q_A Surface layer protein; 100.0 2E-30 6.7E-35 218.4 34.8 228 54-290 22-255 (391)
118 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-32 7E-37 252.4 20.6 222 59-284 430-749 (902)
119 3mmy_A MRNA export factor; mRN 100.0 2.1E-31 7E-36 221.9 23.8 204 57-265 79-344 (368)
120 3bws_A Protein LP49; two-domai 100.0 3.5E-30 1.2E-34 219.7 30.8 224 59-290 164-412 (433)
121 4gq1_A NUP37; propeller, trans 100.0 7.4E-32 2.5E-36 227.6 19.4 206 56-265 128-387 (393)
122 3bws_A Protein LP49; two-domai 100.0 4E-30 1.4E-34 219.3 29.4 228 55-290 114-356 (433)
123 1l0q_A Surface layer protein; 100.0 2.1E-28 7.1E-33 206.0 34.9 219 54-280 64-288 (391)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.8E-29 1.3E-33 212.4 30.5 227 53-289 167-408 (415)
125 4ggc_A P55CDC, cell division c 100.0 1.4E-28 4.9E-33 200.9 32.8 231 51-290 8-252 (318)
126 2w18_A PALB2, fancn, partner a 100.0 3.1E-29 1.1E-33 202.3 26.1 234 54-290 25-338 (356)
127 3vu4_A KMHSV2; beta-propeller 100.0 8.7E-29 3E-33 206.0 27.1 202 65-267 59-336 (355)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-27 4.8E-32 202.7 22.9 224 58-290 111-365 (415)
129 2ojh_A Uncharacterized protein 100.0 2.8E-27 9.6E-32 190.8 21.2 230 54-290 31-283 (297)
130 3vgz_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 180.2 30.9 229 55-290 80-325 (353)
131 1nir_A Nitrite reductase; hemo 99.9 1.4E-24 5E-29 189.8 31.2 232 54-290 169-432 (543)
132 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-26 5.7E-31 196.9 17.4 202 64-268 36-279 (434)
133 3vgz_A Uncharacterized protein 99.9 4.6E-24 1.6E-28 176.8 29.4 225 63-290 39-283 (353)
134 3u4y_A Uncharacterized protein 99.9 2E-24 7E-29 177.5 26.6 231 54-290 30-284 (331)
135 2ecf_A Dipeptidyl peptidase IV 99.9 2E-25 6.9E-30 202.7 21.9 222 64-290 36-348 (741)
136 1ri6_A Putative isomerase YBHE 99.9 1.7E-24 5.9E-29 178.4 25.4 226 61-290 34-288 (343)
137 3u4y_A Uncharacterized protein 99.9 9.4E-24 3.2E-28 173.6 28.2 217 71-290 4-232 (331)
138 1pby_B Quinohemoprotein amine 99.9 1.3E-23 4.6E-28 172.7 25.9 203 66-277 35-320 (337)
139 1nir_A Nitrite reductase; hemo 99.9 2.1E-23 7.3E-28 182.4 28.0 199 71-276 144-364 (543)
140 1xfd_A DIP, dipeptidyl aminope 99.9 3.7E-25 1.3E-29 200.4 15.7 221 66-290 18-317 (723)
141 2z3z_A Dipeptidyl aminopeptida 99.9 5E-24 1.7E-28 192.6 23.0 221 65-290 82-367 (706)
142 2ecf_A Dipeptidyl peptidase IV 99.9 3.4E-24 1.2E-28 194.7 21.9 220 66-290 110-391 (741)
143 2ojh_A Uncharacterized protein 99.9 8.7E-24 3E-28 170.3 21.7 201 82-290 17-228 (297)
144 3hfq_A Uncharacterized protein 99.9 6.1E-23 2.1E-27 170.0 26.8 229 61-290 36-297 (347)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-24 1.3E-28 182.5 18.9 191 87-290 23-252 (434)
146 1ri6_A Putative isomerase YBHE 99.9 2.4E-22 8.3E-27 165.5 27.2 225 58-289 78-333 (343)
147 1xfd_A DIP, dipeptidyl aminope 99.9 8.7E-24 3E-28 191.4 20.1 233 54-290 47-371 (723)
148 1pby_B Quinohemoprotein amine 99.9 2E-22 7E-27 165.6 25.9 207 78-290 2-291 (337)
149 1k32_A Tricorn protease; prote 99.9 2.4E-23 8.2E-28 195.6 22.8 224 55-290 236-483 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-22 5E-27 167.3 23.6 214 69-290 4-306 (349)
151 2z3z_A Dipeptidyl aminopeptida 99.9 3.6E-23 1.2E-27 187.0 21.6 229 55-290 111-412 (706)
152 1jmx_B Amine dehydrogenase; ox 99.9 4.7E-22 1.6E-26 164.3 25.0 212 56-277 33-335 (349)
153 3scy_A Hypothetical bacterial 99.9 4.2E-21 1.4E-25 159.8 29.6 224 63-290 48-317 (361)
154 3o4h_A Acylamino-acid-releasin 99.9 5.1E-23 1.8E-27 182.1 17.4 215 64-290 21-257 (582)
155 1k32_A Tricorn protease; prote 99.9 4.2E-22 1.4E-26 187.2 22.8 195 63-266 294-501 (1045)
156 3scy_A Hypothetical bacterial 99.9 3.4E-20 1.2E-24 154.3 29.6 223 59-287 94-360 (361)
157 1z68_A Fibroblast activation p 99.9 1.6E-23 5.4E-28 189.7 10.1 218 69-290 20-323 (719)
158 3hfq_A Uncharacterized protein 99.9 2E-20 6.7E-25 154.9 27.0 211 57-271 78-323 (347)
159 3fvz_A Peptidyl-glycine alpha- 99.9 6.9E-20 2.4E-24 150.7 29.0 223 64-290 23-303 (329)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 7.2E-21 2.5E-25 158.8 23.3 224 63-288 38-316 (365)
161 3o4h_A Acylamino-acid-releasin 99.9 1.9E-21 6.4E-26 172.0 20.3 219 55-290 54-293 (582)
162 2oiz_A Aromatic amine dehydrog 99.9 1.3E-19 4.4E-24 150.9 25.5 225 55-290 42-359 (361)
163 1q7f_A NHL, brain tumor CG1071 99.9 2.4E-18 8.1E-23 138.5 31.5 222 62-290 27-262 (286)
164 4a5s_A Dipeptidyl peptidase 4 99.9 3.5E-21 1.2E-25 174.9 16.5 221 65-290 17-330 (740)
165 3pe7_A Oligogalacturonate lyas 99.9 4.7E-20 1.6E-24 154.8 21.2 214 53-270 19-276 (388)
166 1z68_A Fibroblast activation p 99.9 3.7E-21 1.3E-25 174.2 14.7 226 55-287 47-365 (719)
167 3e5z_A Putative gluconolactona 99.9 1E-18 3.5E-23 141.5 27.4 227 53-290 16-268 (296)
168 2dg1_A DRP35, lactonase; beta 99.9 6.7E-18 2.3E-22 138.8 31.1 233 54-290 34-291 (333)
169 3azo_A Aminopeptidase; POP fam 99.8 4.1E-19 1.4E-23 159.4 23.0 228 57-287 60-345 (662)
170 3azo_A Aminopeptidase; POP fam 99.8 2.4E-19 8.3E-24 160.8 20.1 228 57-290 16-305 (662)
171 2xdw_A Prolyl endopeptidase; a 99.8 2.7E-18 9.2E-23 155.3 26.9 225 62-290 122-391 (710)
172 3pe7_A Oligogalacturonate lyas 99.8 2E-19 6.9E-24 150.9 17.8 230 56-290 72-362 (388)
173 3no2_A Uncharacterized protein 99.8 6.7E-18 2.3E-22 135.1 25.2 205 77-290 5-224 (276)
174 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.4E-18 1.2E-22 142.6 23.0 198 67-268 85-342 (365)
175 3c5m_A Oligogalacturonate lyas 99.8 3E-19 1E-23 150.1 14.3 230 55-290 21-294 (396)
176 3fvz_A Peptidyl-glycine alpha- 99.8 2.8E-17 9.6E-22 135.1 25.7 202 62-266 88-321 (329)
177 1q7f_A NHL, brain tumor CG1071 99.8 1E-16 3.5E-21 128.9 28.5 201 62-268 74-281 (286)
178 1rwi_B Serine/threonine-protei 99.8 4.3E-17 1.5E-21 129.9 25.0 220 66-290 25-245 (270)
179 2gop_A Trilobed protease; beta 99.8 1.7E-17 5.7E-22 137.1 23.3 203 65-288 59-311 (347)
180 3c5m_A Oligogalacturonate lyas 99.8 2.5E-18 8.4E-23 144.4 15.7 224 58-290 73-362 (396)
181 2dg1_A DRP35, lactonase; beta 99.8 7.4E-17 2.5E-21 132.6 23.3 217 65-290 6-244 (333)
182 3g4e_A Regucalcin; six bladed 99.8 1.7E-15 5.9E-20 122.6 29.8 225 59-289 7-252 (297)
183 2bkl_A Prolyl endopeptidase; m 99.8 2.8E-17 9.6E-22 148.3 20.7 222 62-290 118-374 (695)
184 2z2n_A Virginiamycin B lyase; 99.8 1.4E-14 4.7E-19 116.8 33.5 222 60-290 10-236 (299)
185 2oiz_A Aromatic amine dehydrog 99.8 2.5E-16 8.5E-21 131.0 23.8 200 85-290 29-316 (361)
186 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-17 6.3E-22 150.5 17.3 176 109-290 18-271 (740)
187 3dsm_A Uncharacterized protein 99.8 6.3E-16 2.2E-20 126.9 24.6 215 65-289 44-277 (328)
188 2gop_A Trilobed protease; beta 99.7 2.9E-16 9.8E-21 129.7 21.2 202 65-290 15-274 (347)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2E-15 7E-20 122.7 25.8 227 59-290 12-279 (314)
190 3no2_A Uncharacterized protein 99.7 3.8E-15 1.3E-19 119.1 26.2 226 53-285 24-272 (276)
191 3dsm_A Uncharacterized protein 99.7 2.3E-15 7.9E-20 123.6 25.6 223 54-286 74-319 (328)
192 1rwi_B Serine/threonine-protei 99.7 1.4E-15 4.9E-20 121.0 23.2 201 64-269 66-266 (270)
193 2z2n_A Virginiamycin B lyase; 99.7 6.9E-14 2.4E-18 112.7 33.4 218 63-290 55-277 (299)
194 1qks_A Cytochrome CD1 nitrite 99.7 9.9E-15 3.4E-19 127.7 29.8 212 76-290 166-451 (567)
195 3e5z_A Putative gluconolactona 99.7 7.3E-15 2.5E-19 118.7 26.5 203 57-270 61-289 (296)
196 1xip_A Nucleoporin NUP159; bet 99.7 3.1E-16 1E-20 130.1 18.2 175 66-254 39-231 (388)
197 2ghs_A AGR_C_1268P; regucalcin 99.7 7.8E-14 2.7E-18 114.3 31.5 219 64-290 48-283 (326)
198 3hrp_A Uncharacterized protein 99.7 2.5E-14 8.4E-19 120.8 28.4 220 65-290 131-391 (409)
199 1yr2_A Prolyl oligopeptidase; 99.7 4.2E-15 1.4E-19 135.0 24.6 221 63-290 161-418 (741)
200 3dr2_A Exported gluconolactona 99.7 2E-14 6.7E-19 116.8 25.3 226 54-290 34-288 (305)
201 2qc5_A Streptogramin B lactona 99.7 5.3E-13 1.8E-17 107.5 33.2 221 61-290 16-241 (300)
202 1xip_A Nucleoporin NUP159; bet 99.7 1.2E-15 4.3E-20 126.5 17.4 165 109-290 39-225 (388)
203 2qc5_A Streptogramin B lactona 99.7 4.9E-13 1.7E-17 107.7 31.1 220 63-290 60-283 (300)
204 1qks_A Cytochrome CD1 nitrite 99.7 1.7E-13 5.9E-18 119.9 29.7 228 56-290 189-514 (567)
205 2mad_H Methylamine dehydrogena 99.7 7.7E-13 2.6E-17 110.3 30.7 207 56-274 59-357 (373)
206 2xdw_A Prolyl endopeptidase; a 99.6 4.1E-14 1.4E-18 127.9 23.7 198 67-269 173-416 (710)
207 2mad_H Methylamine dehydrogena 99.6 7.5E-13 2.6E-17 110.3 29.1 206 76-290 31-329 (373)
208 3c75_H MADH, methylamine dehyd 99.6 4.6E-14 1.6E-18 118.6 21.2 182 87-274 99-409 (426)
209 3sjl_D Methylamine dehydrogena 99.6 9.7E-14 3.3E-18 114.8 22.4 210 71-289 39-384 (386)
210 2hz6_A Endoplasmic reticulum t 99.6 1.2E-16 4E-21 133.3 4.4 201 76-289 8-214 (369)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 9.3E-13 3.2E-17 106.9 27.4 198 63-267 69-299 (314)
212 2bkl_A Prolyl endopeptidase; m 99.6 7E-14 2.4E-18 126.1 20.8 177 106-287 119-328 (695)
213 2qe8_A Uncharacterized protein 99.6 3.9E-13 1.3E-17 111.0 23.5 220 65-290 17-302 (343)
214 3iuj_A Prolyl endopeptidase; h 99.6 2E-13 6.7E-18 123.1 21.1 219 62-290 126-382 (693)
215 1npe_A Nidogen, entactin; glyc 99.6 3.9E-11 1.3E-15 95.3 31.0 221 65-290 36-262 (267)
216 3g4e_A Regucalcin; six bladed 99.6 5.6E-12 1.9E-16 101.8 25.4 187 63-256 52-261 (297)
217 2ece_A 462AA long hypothetical 99.5 6.3E-12 2.2E-16 104.9 24.8 216 74-290 93-392 (462)
218 1mda_H Methylamine dehydrogena 99.5 1.3E-12 4.5E-17 108.0 20.5 204 78-288 33-366 (368)
219 1yr2_A Prolyl oligopeptidase; 99.5 2.8E-12 9.6E-17 116.5 22.7 174 108-287 163-372 (741)
220 3hrp_A Uncharacterized protein 99.5 1.6E-11 5.6E-16 103.6 25.5 192 70-265 176-408 (409)
221 3dr2_A Exported gluconolactona 99.5 2.5E-11 8.7E-16 98.4 22.9 196 57-264 78-303 (305)
222 2ghs_A AGR_C_1268P; regucalcin 99.5 1.6E-10 5.5E-15 94.5 27.5 183 64-256 89-291 (326)
223 1yiq_A Quinohemoprotein alcoho 99.4 2.6E-11 8.9E-16 108.9 23.0 188 86-277 182-515 (689)
224 2qe8_A Uncharacterized protein 99.4 3.5E-11 1.2E-15 99.2 21.0 199 62-263 64-317 (343)
225 1kb0_A Quinohemoprotein alcoho 99.4 3.4E-11 1.2E-15 107.9 22.1 188 86-277 189-517 (677)
226 2iwa_A Glutamine cyclotransfer 99.4 5E-11 1.7E-15 93.6 20.1 195 67-268 23-238 (266)
227 3nol_A Glutamine cyclotransfer 99.4 4.4E-10 1.5E-14 87.3 21.5 191 58-256 35-244 (262)
228 2iwa_A Glutamine cyclotransfer 99.4 5.3E-10 1.8E-14 87.8 22.3 187 98-290 10-217 (266)
229 1fwx_A Nitrous oxide reductase 99.4 2.3E-11 7.8E-16 104.9 15.4 199 75-279 100-383 (595)
230 3nol_A Glutamine cyclotransfer 99.3 5.5E-10 1.9E-14 86.8 21.3 185 99-290 33-236 (262)
231 1fwx_A Nitrous oxide reductase 99.3 4.4E-10 1.5E-14 97.0 21.2 207 78-290 16-342 (595)
232 3nok_A Glutaminyl cyclase; bet 99.3 9.5E-10 3.2E-14 85.4 21.0 180 67-255 57-253 (268)
233 2ece_A 462AA long hypothetical 99.3 1.2E-09 4E-14 91.3 23.0 188 66-255 139-399 (462)
234 3hxj_A Pyrrolo-quinoline quino 99.3 3.8E-10 1.3E-14 92.1 18.9 197 79-289 109-305 (330)
235 3mbr_X Glutamine cyclotransfer 99.3 3.9E-09 1.3E-13 81.3 23.1 192 57-256 12-223 (243)
236 3c75_H MADH, methylamine dehyd 99.3 2.7E-10 9.2E-15 95.8 16.5 112 117-230 82-217 (426)
237 3nok_A Glutaminyl cyclase; bet 99.3 3.1E-09 1E-13 82.6 21.0 185 98-290 44-246 (268)
238 3iuj_A Prolyl endopeptidase; h 99.3 1.2E-09 3.9E-14 98.6 21.5 195 68-270 178-408 (693)
239 3v64_C Agrin; beta propeller, 99.2 3.8E-08 1.3E-12 81.1 28.6 219 64-286 72-294 (349)
240 3p5b_L Low density lipoprotein 99.2 2.2E-07 7.4E-12 78.1 33.1 222 63-286 110-339 (400)
241 3v65_B Low-density lipoprotein 99.2 4.1E-08 1.4E-12 82.1 28.3 219 64-286 115-337 (386)
242 3sjl_D Methylamine dehydrogena 99.2 7.6E-10 2.6E-14 91.6 17.4 150 113-270 38-212 (386)
243 3qqz_A Putative uncharacterize 99.2 4.5E-08 1.5E-12 76.4 25.9 205 58-265 20-251 (255)
244 1ijq_A LDL receptor, low-densi 99.2 2.2E-07 7.6E-12 75.5 30.7 211 64-276 29-247 (316)
245 3hxj_A Pyrrolo-quinoline quino 99.2 4.8E-10 1.6E-14 91.5 15.0 197 63-278 58-254 (330)
246 3mbr_X Glutamine cyclotransfer 99.2 3.1E-08 1.1E-12 76.3 23.3 185 99-290 11-215 (243)
247 2hz6_A Endoplasmic reticulum t 99.2 1.5E-12 5.3E-17 108.4 -0.9 148 118-275 8-157 (369)
248 2fp8_A Strictosidine synthase; 99.2 5.6E-08 1.9E-12 79.2 25.7 220 60-286 14-291 (322)
249 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.5E-08 5E-13 84.4 22.4 192 78-275 54-266 (376)
250 2p4o_A Hypothetical protein; p 99.2 1.7E-07 5.7E-12 75.8 28.0 216 65-290 32-269 (306)
251 1kv9_A Type II quinohemoprotei 99.1 1.7E-08 5.7E-13 90.5 23.5 188 86-277 177-498 (668)
252 1mda_H Methylamine dehydrogena 99.1 1.6E-09 5.4E-14 89.6 15.7 186 54-246 56-366 (368)
253 3q7m_A Lipoprotein YFGL, BAMB; 99.1 4E-08 1.4E-12 81.7 23.5 188 79-276 145-346 (376)
254 1npe_A Nidogen, entactin; glyc 99.1 3.3E-07 1.1E-11 72.5 27.5 183 87-272 10-203 (267)
255 1kb0_A Quinohemoprotein alcoho 99.1 1.3E-08 4.3E-13 91.4 19.8 193 79-275 79-354 (677)
256 1yiq_A Quinohemoprotein alcoho 99.1 7E-09 2.4E-13 93.2 17.9 195 79-275 72-346 (689)
257 2ad6_A Methanol dehydrogenase 99.1 6.5E-08 2.2E-12 85.0 22.6 187 86-277 175-504 (571)
258 1flg_A Protein (quinoprotein e 99.0 6.2E-08 2.1E-12 85.3 22.3 144 129-277 291-526 (582)
259 3sov_A LRP-6, low-density lipo 99.0 5.3E-07 1.8E-11 73.2 25.9 208 65-276 35-247 (318)
260 1w6s_A Methanol dehydrogenase 99.0 9.6E-08 3.3E-12 84.1 22.4 188 85-277 180-513 (599)
261 3v64_C Agrin; beta propeller, 99.0 1.9E-06 6.4E-11 71.0 28.2 216 64-286 33-253 (349)
262 3m0c_C LDL receptor, low-densi 99.0 2.4E-06 8.3E-11 77.5 30.7 212 63-276 422-641 (791)
263 2fp8_A Strictosidine synthase; 99.0 4.6E-07 1.6E-11 73.7 23.7 198 65-267 80-313 (322)
264 1n7d_A LDL receptor, low-densi 98.9 9.6E-09 3.3E-13 92.3 13.1 218 66-285 407-632 (699)
265 4a2l_A BT_4663, two-component 98.9 4.7E-06 1.6E-10 76.3 30.9 216 64-290 356-597 (795)
266 4a2l_A BT_4663, two-component 98.9 4.9E-06 1.7E-10 76.2 30.5 217 64-290 309-554 (795)
267 3v65_B Low-density lipoprotein 98.9 3.3E-06 1.1E-10 70.5 26.9 213 67-286 79-296 (386)
268 3qqz_A Putative uncharacterize 98.9 1.6E-06 5.6E-11 67.6 22.7 187 102-290 21-235 (255)
269 1kv9_A Type II quinohemoprotei 98.9 1.4E-07 4.6E-12 84.6 18.7 194 79-275 68-341 (668)
270 2xe4_A Oligopeptidase B; hydro 98.9 2.6E-07 8.9E-12 84.0 20.8 194 66-265 175-398 (751)
271 3amr_A 3-phytase; beta-propell 98.9 3.7E-06 1.3E-10 68.2 24.9 193 77-275 40-272 (355)
272 3tc9_A Hypothetical hydrolase; 98.9 2.5E-06 8.7E-11 72.3 25.1 218 66-289 138-409 (430)
273 1ijq_A LDL receptor, low-densi 98.8 2.1E-05 7.1E-10 63.8 30.2 177 87-267 10-195 (316)
274 4hw6_A Hypothetical protein, I 98.8 1.4E-05 4.8E-10 67.7 27.2 200 66-270 140-376 (433)
275 3p5b_L Low density lipoprotein 98.8 2.3E-05 8E-10 65.7 27.9 187 76-268 83-278 (400)
276 1w6s_A Methanol dehydrogenase 98.8 2.4E-06 8.4E-11 75.2 22.1 193 79-275 64-350 (599)
277 3v9f_A Two-component system se 98.8 9.2E-06 3.1E-10 74.3 26.6 217 64-289 362-593 (781)
278 3sov_A LRP-6, low-density lipo 98.7 1.7E-05 5.8E-10 64.3 24.9 204 77-286 5-216 (318)
279 3s94_A LRP-6, low-density lipo 98.7 8.9E-06 3E-10 72.1 24.7 209 64-276 39-252 (619)
280 2p9w_A MAL S 1 allergenic prot 98.7 3.6E-05 1.2E-09 61.9 25.5 207 61-267 9-265 (334)
281 4a0p_A LRP6, LRP-6, low-densit 98.7 5.2E-05 1.8E-09 67.3 28.3 206 65-276 37-246 (628)
282 3kya_A Putative phosphatase; s 98.7 3E-05 1E-09 66.3 24.9 207 66-275 140-416 (496)
283 3v9f_A Two-component system se 98.7 6.9E-05 2.3E-09 68.5 29.2 219 64-290 257-506 (781)
284 3m0c_C LDL receptor, low-densi 98.7 8.1E-05 2.8E-09 67.7 29.0 180 86-269 403-591 (791)
285 1flg_A Protein (quinoprotein e 98.6 1.5E-05 5.3E-10 70.1 22.7 198 76-277 68-365 (582)
286 2xe4_A Oligopeptidase B; hydro 98.6 1.6E-06 5.3E-11 78.9 16.8 154 109-267 175-354 (751)
287 2ad6_A Methanol dehydrogenase 98.6 1.3E-05 4.3E-10 70.5 22.0 193 79-276 64-344 (571)
288 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00028 9.6E-09 62.6 30.7 207 65-276 340-558 (628)
289 1k3i_A Galactose oxidase precu 98.6 4.7E-06 1.6E-10 74.6 18.7 114 69-182 190-325 (656)
290 3tc9_A Hypothetical hydrolase; 98.6 5.9E-06 2E-10 70.0 18.3 153 109-266 138-300 (430)
291 2p9w_A MAL S 1 allergenic prot 98.6 2.3E-05 7.9E-10 63.0 20.2 158 110-268 15-216 (334)
292 2p4o_A Hypothetical protein; p 98.6 8.1E-05 2.8E-09 59.9 23.9 188 65-258 72-279 (306)
293 2xbg_A YCF48-like protein; pho 98.5 0.00017 5.8E-09 58.7 25.5 192 65-265 122-320 (327)
294 3s94_A LRP-6, low-density lipo 98.5 0.00052 1.8E-08 60.9 29.3 215 65-284 349-567 (619)
295 4hw6_A Hypothetical protein, I 98.5 0.00014 4.9E-09 61.5 24.6 204 59-266 176-432 (433)
296 2ism_A Putative oxidoreductase 98.5 0.00015 5.2E-09 59.6 24.1 218 64-290 30-326 (352)
297 2xbg_A YCF48-like protein; pho 98.4 0.00043 1.5E-08 56.3 25.3 214 64-288 79-302 (327)
298 3sre_A PON1, serum paraoxonase 98.3 0.00039 1.3E-08 56.9 22.7 209 59-275 44-308 (355)
299 3amr_A 3-phytase; beta-propell 98.3 0.00017 5.8E-09 58.5 19.5 160 119-286 40-236 (355)
300 1k3i_A Galactose oxidase precu 98.3 8E-05 2.7E-09 66.7 19.5 188 67-256 245-530 (656)
301 2xzh_A Clathrin heavy chain 1; 98.2 0.001 3.5E-08 53.2 27.8 211 70-286 72-309 (365)
302 3kya_A Putative phosphatase; s 98.2 0.0013 4.5E-08 56.2 24.2 205 66-273 187-481 (496)
303 1n7d_A LDL receptor, low-densi 98.2 6.8E-06 2.3E-10 73.9 10.8 178 86-267 385-571 (699)
304 1bpo_A Protein (clathrin); cla 98.1 0.0028 9.4E-08 52.8 27.3 211 69-285 70-307 (494)
305 3a9g_A Putative uncharacterize 98.1 0.0027 9.4E-08 52.1 25.9 220 64-290 28-323 (354)
306 3pbp_A Nucleoporin NUP82; beta 98.1 0.00086 2.9E-08 55.7 19.4 147 116-264 29-209 (452)
307 3ii7_A Kelch-like protein 7; p 98.1 0.00081 2.8E-08 53.9 19.3 191 76-275 55-282 (306)
308 2vpj_A Kelch-like protein 12; 98.0 0.00059 2E-08 54.6 17.6 185 76-269 62-280 (301)
309 2xn4_A Kelch-like protein 2; s 98.0 0.00086 2.9E-08 53.7 17.1 185 76-269 61-278 (302)
310 2g8s_A Glucose/sorbosone dehyd 97.9 0.0056 1.9E-07 50.3 24.3 220 64-290 17-334 (353)
311 2vpj_A Kelch-like protein 12; 97.9 0.0017 5.8E-08 51.9 17.9 185 76-269 14-233 (301)
312 2be1_A Serine/threonine-protei 97.9 0.00027 9.2E-09 57.4 12.8 191 78-272 11-236 (339)
313 3ii7_A Kelch-like protein 7; p 97.8 0.0021 7.1E-08 51.5 17.6 184 77-269 12-227 (306)
314 3pbp_A Nucleoporin NUP82; beta 97.8 0.005 1.7E-07 51.2 19.3 131 87-219 41-209 (452)
315 4asc_A Kelch repeat and BTB do 97.7 0.0057 2E-07 49.2 18.8 185 76-269 45-279 (315)
316 1tl2_A L10, protein (tachylect 97.7 0.0061 2.1E-07 46.0 16.9 143 108-261 41-204 (236)
317 2xn4_A Kelch-like protein 2; s 97.7 0.0042 1.4E-07 49.6 16.6 184 77-269 16-231 (302)
318 1xi4_A Clathrin heavy chain; a 97.6 0.0028 9.4E-08 60.4 16.8 200 70-275 71-297 (1630)
319 1zgk_A Kelch-like ECH-associat 97.6 0.0028 9.6E-08 50.8 15.1 185 76-269 70-289 (308)
320 3sre_A PON1, serum paraoxonase 97.6 0.022 7.4E-07 46.6 21.0 152 110-267 52-252 (355)
321 1zgk_A Kelch-like ECH-associat 97.6 0.0036 1.2E-07 50.2 15.1 185 76-269 24-242 (308)
322 2woz_A Kelch repeat and BTB do 97.6 0.0095 3.2E-07 47.9 17.6 185 76-269 56-289 (318)
323 2ism_A Putative oxidoreductase 97.6 0.024 8.2E-07 46.4 20.6 187 64-255 74-333 (352)
324 3sbq_A Nitrous-oxide reductase 97.5 0.01 3.6E-07 51.0 17.6 87 192-278 323-429 (638)
325 1tl2_A L10, protein (tachylect 97.5 0.0042 1.4E-07 46.8 13.2 142 65-216 41-204 (236)
326 3das_A Putative oxidoreductase 97.5 0.028 9.6E-07 45.8 26.8 229 56-290 23-319 (347)
327 4asc_A Kelch repeat and BTB do 97.5 0.017 6E-07 46.3 18.2 183 78-269 6-223 (315)
328 3das_A Putative oxidoreductase 97.4 0.026 8.8E-07 46.0 18.5 143 144-290 26-213 (347)
329 3ei3_A DNA damage-binding prot 97.4 0.031 1.1E-06 53.2 20.9 187 72-264 839-1059(1158)
330 2uvk_A YJHT; unknown function, 97.4 0.0042 1.4E-07 50.9 13.5 192 76-275 65-350 (357)
331 1cru_A Protein (soluble quinop 97.4 0.052 1.8E-06 46.1 21.4 103 108-210 27-162 (454)
332 2zwa_A Leucine carboxyl methyl 97.4 0.012 4.2E-07 52.9 17.3 194 76-270 397-638 (695)
333 2g8s_A Glucose/sorbosone dehyd 97.3 0.011 3.8E-07 48.5 14.8 116 150-266 18-172 (353)
334 3ott_A Two-component system se 97.3 0.1 3.5E-06 47.4 26.6 213 64-288 21-241 (758)
335 2woz_A Kelch repeat and BTB do 97.2 0.049 1.7E-06 43.7 17.7 183 78-269 17-233 (318)
336 3ott_A Two-component system se 97.2 0.13 4.4E-06 46.7 29.3 192 64-270 62-263 (758)
337 1cru_A Protein (soluble quinop 97.1 0.095 3.2E-06 44.5 20.5 111 57-168 19-162 (454)
338 3a9g_A Putative uncharacterize 96.9 0.13 4.5E-06 42.0 23.6 190 64-255 72-330 (354)
339 2uvk_A YJHT; unknown function, 96.8 0.039 1.3E-06 45.1 14.0 91 76-170 19-128 (357)
340 3s25_A Hypothetical 7-bladed b 96.8 0.12 4.1E-06 41.2 16.4 170 76-267 25-216 (302)
341 3s25_A Hypothetical 7-bladed b 96.8 0.15 5.1E-06 40.7 19.5 174 71-266 59-254 (302)
342 2be1_A Serine/threonine-protei 96.7 0.028 9.5E-07 45.6 11.9 112 120-231 11-139 (339)
343 2xzh_A Clathrin heavy chain 1; 96.6 0.22 7.5E-06 40.1 23.8 198 65-269 107-334 (365)
344 1bpo_A Protein (clathrin); cla 96.6 0.28 9.5E-06 41.1 24.4 180 86-269 124-333 (494)
345 2zwa_A Leucine carboxyl methyl 96.3 0.1 3.5E-06 47.0 14.3 147 76-224 451-637 (695)
346 1xi4_A Clathrin heavy chain; a 96.1 0.42 1.4E-05 46.2 17.2 198 66-270 107-334 (1630)
347 3ei3_A DNA damage-binding prot 96.0 1.1 3.9E-05 42.7 29.6 204 79-289 525-747 (1158)
348 3qhy_B Beta-lactamase inhibito 95.7 0.55 1.9E-05 37.0 15.2 183 66-267 64-246 (282)
349 3qhy_B Beta-lactamase inhibito 95.5 0.53 1.8E-05 37.1 13.5 182 66-266 25-206 (282)
350 3sbq_A Nitrous-oxide reductase 95.3 0.15 5.1E-06 44.0 10.2 101 108-210 323-453 (638)
351 3b7f_A Glycosyl hydrolase, BNR 95.3 1 3.5E-05 37.1 21.8 219 65-287 115-391 (394)
352 3b7f_A Glycosyl hydrolase, BNR 94.7 1.6 5.3E-05 36.1 19.9 141 109-254 116-296 (394)
353 2wg3_C Hedgehog-interacting pr 94.3 1.4 4.6E-05 37.5 13.8 107 150-257 14-159 (463)
354 3q6k_A 43.2 kDa salivary prote 92.6 3.8 0.00013 33.7 20.0 159 108-267 87-306 (381)
355 3q6k_A 43.2 kDa salivary prote 91.8 4.8 0.00016 33.1 21.0 191 64-256 86-343 (381)
356 4gq2_M Nucleoporin NUP120; bet 91.7 6.2 0.00021 36.9 15.1 38 238-275 237-274 (950)
357 2wg3_C Hedgehog-interacting pr 91.0 6.6 0.00023 33.3 24.4 104 65-169 14-158 (463)
358 4gq2_M Nucleoporin NUP120; bet 90.1 8.8 0.0003 35.9 14.6 38 109-146 237-274 (950)
359 2cn3_A Xyloglucanase, beta-1,4 87.7 16 0.00053 33.1 23.1 187 66-254 24-261 (737)
360 1suu_A DNA gyrase subunit A; t 87.3 9.7 0.00033 30.3 21.8 186 76-266 7-230 (312)
361 4fhn_B Nucleoporin NUP120; pro 86.5 9.3 0.00032 36.6 12.5 38 238-275 239-276 (1139)
362 3zwu_A Alkaline phosphatase PH 86.5 4.1 0.00014 35.7 9.2 60 193-254 477-548 (592)
363 3no0_A DNA gyrase subunit A; D 86.0 11 0.00036 29.5 19.9 193 65-266 24-245 (276)
364 4hvt_A Ritya.17583.B, post-pro 85.9 19 0.00066 32.4 20.7 199 66-269 130-383 (711)
365 3uc1_A DNA gyrase subunit A; D 85.5 13 0.00043 29.9 19.8 184 77-265 3-226 (327)
366 4a9v_A PHOX; hydrolase, beta-p 83.3 10 0.00035 33.0 10.1 61 193-255 477-549 (592)
367 1sqj_A OXG-RCBH, oligoxylogluc 81.4 32 0.0011 31.4 25.3 148 64-212 14-190 (789)
368 3f7f_A Nucleoporin NUP120; nuc 79.9 10 0.00035 34.0 9.1 37 238-276 223-259 (729)
369 3l6v_A GYRA, DNA gyrase subuni 78.8 25 0.00087 28.7 20.8 144 73-220 4-178 (370)
370 3no0_A DNA gyrase subunit A; D 77.9 22 0.00077 27.6 18.5 154 64-221 67-245 (276)
371 4a9v_A PHOX; hydrolase, beta-p 76.7 20 0.0007 31.2 9.7 60 151-210 477-549 (592)
372 3zwu_A Alkaline phosphatase PH 76.5 15 0.00051 32.3 9.1 58 110-167 478-548 (592)
373 4fhn_B Nucleoporin NUP120; pro 74.1 64 0.0022 30.9 17.3 38 193-230 239-276 (1139)
374 1zi0_A DNA gyrase subunit A; b 72.7 33 0.0011 27.1 20.1 185 76-265 2-224 (307)
375 1wp5_A Topoisomerase IV; broke 72.7 35 0.0012 27.3 19.8 186 76-266 4-224 (323)
376 3f7f_A Nucleoporin NUP120; nuc 70.1 8.6 0.00029 34.5 6.1 37 109-147 223-259 (729)
377 3uc1_A DNA gyrase subunit A; D 67.0 47 0.0016 26.5 22.1 157 107-266 94-278 (327)
378 3a0f_A Xyloglucanase; beta-pro 63.7 86 0.003 28.4 21.7 150 63-213 19-203 (763)
379 1wp5_A Topoisomerase IV; broke 57.2 72 0.0025 25.4 23.6 157 108-266 92-276 (323)
380 1suu_A DNA gyrase subunit A; t 56.9 71 0.0024 25.2 23.7 140 79-221 60-230 (312)
381 1q47_A Semaphorin 3A; beta pro 55.1 73 0.0025 27.2 8.9 67 151-217 405-487 (495)
382 1zvt_A Topoisomerase IV subuni 55.0 69 0.0023 24.5 12.4 140 121-266 4-162 (256)
383 2cn3_A Xyloglucanase, beta-1,4 53.1 1.3E+02 0.0044 27.1 15.4 103 109-212 24-153 (737)
384 3kci_A Probable E3 ubiquitin-p 49.4 1.1E+02 0.0036 25.0 27.5 192 66-266 106-344 (389)
385 3al9_A Plexin-A2; beta-propell 48.8 85 0.0029 27.2 8.5 67 151-217 401-476 (539)
386 1q47_A Semaphorin 3A; beta pro 48.4 69 0.0024 27.4 7.8 68 194-262 406-487 (495)
387 3kci_A Probable E3 ubiquitin-p 46.4 1.2E+02 0.004 24.7 26.3 193 66-265 54-291 (389)
388 3al9_A Plexin-A2; beta-propell 44.4 72 0.0025 27.6 7.4 69 193-262 401-476 (539)
389 3mvd_K Regulator of chromosome 42.8 1.4E+02 0.0048 24.5 27.2 189 65-266 127-373 (423)
390 3l6v_A GYRA, DNA gyrase subuni 41.7 1.4E+02 0.0048 24.3 22.4 157 107-265 98-314 (370)
391 1zi0_A DNA gyrase subunit A; b 41.5 1.3E+02 0.0043 23.7 22.4 157 107-266 94-276 (307)
392 3oky_B Putative uncharacterize 38.6 1.5E+02 0.0052 25.8 8.3 68 151-218 404-496 (565)
393 1olz_A Semaphorin 4D; developm 37.6 1.5E+02 0.0052 26.4 8.5 57 205-262 417-477 (663)
394 4gz8_A Semaphorin-3A; multi-do 35.6 1.2E+02 0.0042 27.0 7.5 58 204-262 430-495 (667)
395 3nvq_A Semaphorin-7A; beta-pro 35.3 1.5E+02 0.005 26.1 7.8 58 204-262 381-444 (590)
396 3nvq_A Semaphorin-7A; beta-pro 35.2 1.5E+02 0.005 26.0 7.8 57 162-218 381-445 (590)
397 3a0f_A Xyloglucanase; beta-pro 33.6 2.7E+02 0.0093 25.2 18.1 151 106-258 19-203 (763)
398 1zvt_A Topoisomerase IV subuni 32.2 1.7E+02 0.0057 22.3 13.8 140 79-221 4-162 (256)
399 4gz8_A Semaphorin-3A; multi-do 30.1 1.3E+02 0.0045 26.8 6.8 56 162-217 430-495 (667)
400 3ol2_B Plexin-B1; beta-propell 29.5 2.4E+02 0.0081 24.4 8.1 67 194-262 389-461 (528)
401 3oky_B Putative uncharacterize 28.6 2.5E+02 0.0085 24.5 8.1 79 56-134 394-496 (565)
402 1sqj_A OXG-RCBH, oligoxylogluc 27.0 3.6E+02 0.012 24.5 19.4 152 107-260 14-194 (789)
403 2zux_A YESW protein; beta-prop 26.0 3.3E+02 0.011 23.8 22.2 180 88-276 152-409 (591)
404 1ukf_A Avirulence protein AVRP 25.5 98 0.0034 22.3 4.2 40 62-101 116-155 (188)
405 1sr4_A CDT A, cytolethal diste 25.3 1.4E+02 0.0049 21.9 5.1 101 165-273 63-165 (206)
406 1olz_A Semaphorin 4D; developm 25.2 3.2E+02 0.011 24.4 8.4 67 151-217 398-477 (663)
407 3ol2_B Plexin-B1; beta-propell 21.3 3E+02 0.01 23.7 7.2 68 151-218 388-462 (528)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-45 Score=299.73 Aligned_cols=234 Identities=23% Similarity=0.332 Sum_probs=217.9
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.+..++|.+|.+.|++++|+| ++.+|++|+.||.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|+.|++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 466789999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-cEEEeeecCCCCeEEEEEcC-CCCEEEEEeC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGSD 211 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 211 (290)
||+.+++.+..+.+|...|.+++|+|++++|++|+.||+|++||++++ .....+.+|...|.+++|+| ++.+|++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999887 45577889999999999999 6789999999
Q ss_pred CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
|+.|++||++++.....+... +...+..+.|+| ++.+|++|+.|+.|++||+++++++..+.+|...|++++|+|+
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 999999999988776666543 567899999987 7789999999999999999999999999999999999999998
Q ss_pred C
Q 022910 290 E 290 (290)
Q Consensus 290 ~ 290 (290)
+
T Consensus 240 ~ 240 (304)
T 2ynn_A 240 L 240 (304)
T ss_dssp S
T ss_pred C
Confidence 5
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.5e-45 Score=308.39 Aligned_cols=233 Identities=28% Similarity=0.473 Sum_probs=222.2
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|.++|++++|+| ++.+|++|+.||+|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 98 ~~~~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 98 PPEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp SSCSCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred CCceEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 345678999999999999999 7789999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 213 (290)
||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||++++.++..+.+|...|.++.|+|++.+|++|+.|+
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCC--------------------CCEEEEEeCCCcEEEEEcCCCcEEEE
Q 022910 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD--------------------STLALSGSKDGSVHMVNITTGKVVSS 273 (290)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~i~~wd~~~~~~~~~ 273 (290)
.|++||+++++....+.. |...|.+++|+|+ +.+|++|+.||.|++||+++++++..
T Consensus 257 ~v~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 257 TVRVWVVATKECKAELRE---HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp CEEEEETTTCCEEEEECC---CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCceeeEecC---CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999998888876 7889999999996 67899999999999999999999999
Q ss_pred EccCCCcEEEEEEecCC
Q 022910 274 LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 274 ~~~~~~~v~~i~~s~d~ 290 (290)
+.+|.+.|++++|+|+|
T Consensus 334 ~~~h~~~v~~v~~~~~g 350 (410)
T 1vyh_C 334 LVGHDNWVRGVLFHSGG 350 (410)
T ss_dssp EECCSSCEEEEEECSSS
T ss_pred EECCCCcEEEEEEcCCC
Confidence 99999999999999986
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.3e-45 Score=298.70 Aligned_cols=231 Identities=23% Similarity=0.374 Sum_probs=221.1
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEc
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (290)
....+.+|...|.+++|+| ++.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.+|.|++|+
T Consensus 72 ~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEE
T ss_pred eeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 4557899999999999999 778999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 022910 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 215 (290)
+.+++....+..+...+.+++|+|++++|++|+.||.|++||+++++.+..+.+|..+|.+++|+|++++|++++.|+.|
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i 230 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYI 230 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCE
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++||+++++....+.+ |...|.+++|+|++.+|++|+.|++|++||+.+++++.++.+|...|++++|+|+|
T Consensus 231 ~iwd~~~~~~~~~~~~---h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSG---HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 302 (321)
T ss_dssp EEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred EEEECCCcceeEEEcC---CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence 9999999998888876 78899999999999999999999999999999999999999999999999999985
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-44 Score=306.36 Aligned_cols=234 Identities=21% Similarity=0.399 Sum_probs=223.2
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
.......+.+|.+.|++++|+| ++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|+
T Consensus 139 ~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 139 TGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp TCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3456788999999999999999 778999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCC----------
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD---------- 202 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---------- 202 (290)
+||+.++.++..+.+|...|.++.|+|++.+|++|+.|+.|++||+++++....+..|...|.+++|+|+
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ----------CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 022910 203 ----------GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS 272 (290)
Q Consensus 203 ----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 272 (290)
+.+|++|+.|+.|++||++++.++..+.+ |...|++++|+|++++|++|+.||.|++||+.+++++.
T Consensus 298 ~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~---h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374 (410)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE
T ss_pred cccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 67899999999999999999999888887 78899999999999999999999999999999999999
Q ss_pred EEccCCCcEEEEEEecCC
Q 022910 273 SLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 273 ~~~~~~~~v~~i~~s~d~ 290 (290)
.+.+|...|++++|+|++
T Consensus 375 ~~~~h~~~v~~l~~~~~~ 392 (410)
T 1vyh_C 375 TLNAHEHFVTSLDFHKTA 392 (410)
T ss_dssp EEECCSSCEEEEEECSSS
T ss_pred EEcCCCCcEEEEEEcCCC
Confidence 999999999999999985
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-43 Score=293.22 Aligned_cols=237 Identities=23% Similarity=0.427 Sum_probs=208.0
Q ss_pred CCCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
.+......+++|.+.|++++|+| ++.+|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred ccchhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 34667889999999999999999 78899999999999999998888777777777777777777777766666655555
Q ss_pred EEEc---------------------------------------------CCCCceEEEEecCCCCEEEEEEcCCCCEEEE
Q 022910 132 QIWD---------------------------------------------PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLA 166 (290)
Q Consensus 132 ~i~d---------------------------------------------~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~ 166 (290)
++|+ +.+++.+..+.+|.+.|.+++|+|++++|++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 5554 4445555566778889999999999999999
Q ss_pred eeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC
Q 022910 167 GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 167 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (290)
|+.||.|++||+++++.+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.. ..+...|++++|+|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~ 280 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSK 280 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc-CCcccceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999888776653 22456799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 247 DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 247 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++++|++|+.||.|++||+.+++.+..+.+|.++|++++|+|+|
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg 324 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC
Confidence 99999999999999999999999999999999999999999986
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.2e-43 Score=293.09 Aligned_cols=237 Identities=21% Similarity=0.395 Sum_probs=214.7
Q ss_pred CCCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee------------------------------
Q 022910 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS------------------------------ 101 (290)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~------------------------------ 101 (290)
........+.+|.+.|++++|+| ++.+|++|+.||+|++||..+++...
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred cccEEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 34567889999999999999999 77899999999999999986654322
Q ss_pred ------------------eeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcC--CC
Q 022910 102 ------------------EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP--RG 161 (290)
Q Consensus 102 ------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~--~~ 161 (290)
.+..|...|.+++|+|++.+|++++.|++|++||+.+++.+..+.+|...|.+++|+| ++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 2335778899999999999999999999999999999999999999999999999988 46
Q ss_pred CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEE
Q 022910 162 HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTC 241 (290)
Q Consensus 162 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 241 (290)
++|++|+.||.|++||+++++++..+..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+.... +...+.+
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~-~~~~~~~ 289 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES-IIFGASS 289 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-CCSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-cccceeE
Confidence 899999999999999999999999999999999999999999999999999999999999988776665422 4457899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 242 LTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++|+|++++|++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|+|
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999986
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=292.12 Aligned_cols=237 Identities=21% Similarity=0.373 Sum_probs=217.3
Q ss_pred CCCCCceeeeccCCcCEEEEEECCC---CCcEEEEecCCCcEEEEEccCCee--eeeeccccCCEEEEEECCCCCEEEEE
Q 022910 51 EQPDDSTHIFSGHSDEVYSVACSPT---DATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSMDGQLLASG 125 (290)
Q Consensus 51 ~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~ 125 (290)
+......+.+.+|.+.|++++|+|+ ++.+|++|+.|++|++|++..++. ...+.+|...|.+++|++++.+++++
T Consensus 19 ~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~ 98 (321)
T 3ow8_A 19 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASS 98 (321)
T ss_dssp --CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred hhhhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEE
Confidence 3445556778899999999999984 356899999999999999987654 44688999999999999999999999
Q ss_pred eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCE
Q 022910 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (290)
+.|++|++||+.+++.+..+..+...+.+++|+|++++|++++.+|.|++|++++++....+..+...|.+++|+|++++
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 99999999999999999999988888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEE
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~ 285 (290)
|++++.||.|++||+++++.+..+.. |...|++++|+|++++|++|+.||.|++||+++++++..+.+|...|++++
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEG---HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC---CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcc---cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 99999999999999999999888876 788999999999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 022910 286 FSRSE 290 (290)
Q Consensus 286 ~s~d~ 290 (290)
|+|+|
T Consensus 256 ~sp~~ 260 (321)
T 3ow8_A 256 FCPDD 260 (321)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 99986
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-43 Score=286.71 Aligned_cols=233 Identities=22% Similarity=0.330 Sum_probs=214.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
...++.+.+|..+|.+++|+| ++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 45 QVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp TEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred CceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 456788999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCC-ceEEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEeee-cCCCCeEEEEEcC--CCCEEEE
Q 022910 134 WDPSSG-NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTP--DGKTICT 208 (290)
Q Consensus 134 ~d~~~~-~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~ 208 (290)
||+.++ .....+.+|...|.+++|+| ++.+|++|+.|+.|++||+++......+. .+...+..+.|+| ++.+|++
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 203 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE
Confidence 999887 45567888999999999999 67899999999999999998877655554 4667899999987 6789999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.|+.|++||+++++++..+.+ |...|.+++|+|++++|++|+.||+|++||+.+++++..+..|...+++++|+|
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECT
T ss_pred EcCCCeEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECC
Confidence 99999999999999999998887 788999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
+|
T Consensus 281 ~~ 282 (304)
T 2ynn_A 281 TG 282 (304)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.8e-43 Score=287.52 Aligned_cols=232 Identities=24% Similarity=0.394 Sum_probs=212.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC-----CeeeeeeccccCCEEEEEECCCCCEEEEEeCC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-----GDWASEIQGHKDSVSSLAFSMDGQLLASGGLD 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 128 (290)
......|.+|.+.|++++|+|.++.+|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++++.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 3456789999999999999996678999999999999999864 34567788999999999999999999999999
Q ss_pred CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCC------
Q 022910 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD------ 202 (290)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------ 202 (290)
++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++ ++.+..+.+|...|.+++|+|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 999999999999999999999999999999999999999999999999996 4567788889999999999985
Q ss_pred CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEE
Q 022910 203 GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIE 282 (290)
Q Consensus 203 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 282 (290)
+.+|++++.|+.|++||+++.+....+.+ |...|++++|+|++++|++|+.||.|++||+.+++++..+..+ ..|.
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~ 241 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIG---HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVF 241 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECC---CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEE
Confidence 44899999999999999999988877776 7889999999999999999999999999999999999999864 6899
Q ss_pred EEEEecCC
Q 022910 283 CIGFSRSE 290 (290)
Q Consensus 283 ~i~~s~d~ 290 (290)
+++|+|++
T Consensus 242 ~~~~sp~~ 249 (319)
T 3frx_A 242 SLAFSPNR 249 (319)
T ss_dssp EEEECSSS
T ss_pred EEEEcCCC
Confidence 99999986
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=292.30 Aligned_cols=226 Identities=17% Similarity=0.237 Sum_probs=198.9
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee----eccccCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE----IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (290)
....|...|.+++|+| ++ .|++|+.||+|+|||+.+++.... +.+|...|++++|+|++++|++|+.|++|++|
T Consensus 77 ~~~~~~~~v~~~~~s~-d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVG-ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEEEESSCEEEEEEET-TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCEEEEEEeC-CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3445678899999999 54 567999999999999998765443 44799999999999999999999999999999
Q ss_pred cCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeee--cCCCCeEEEEEcC-CCCEEEEEe
Q 022910 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTP-DGKTICTGS 210 (290)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~ 210 (290)
|+.+++++..+.+|...|.+++|+|++. +|++++.|+.|++||+++++....+. .+...+.+++|+| ++++|++|+
T Consensus 155 d~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 9999999999999999999999999875 78999999999999999998887764 3556799999999 567889999
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
.||.|++||+++++++..+.+ |...|++++|+|++ ++|++|+.|++|++||+.+++++ .+.+|.+.|++++|+|+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPL 310 (344)
T ss_dssp TTSEEEEEESCC--CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSS
T ss_pred cCCcEEEEECCCCcEEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCC
Confidence 999999999999999998887 78899999999987 58999999999999999988765 57899999999999998
Q ss_pred C
Q 022910 290 E 290 (290)
Q Consensus 290 ~ 290 (290)
|
T Consensus 311 ~ 311 (344)
T 4gqb_B 311 N 311 (344)
T ss_dssp S
T ss_pred C
Confidence 5
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-42 Score=288.98 Aligned_cols=237 Identities=25% Similarity=0.447 Sum_probs=202.0
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCE-----------
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQL----------- 121 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 121 (290)
...+.+.|.+|.+.|++++|+| ++.+|++|+.||+|+|||+.+++....+..|...|.+++|+|++++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~ 133 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACS 133 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCE
T ss_pred eeEEeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE
Confidence 4556788999999999999999 7788999999999999999998888777777777777777776554
Q ss_pred ---------------------------------------EEEEeCCCcEEEEcCCCCceEEEE-----ecCCCCEEEEEE
Q 022910 122 ---------------------------------------LASGGLDGLVQIWDPSSGNLKCTL-----EGPGGGVEWVSW 157 (290)
Q Consensus 122 ---------------------------------------l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~i~~ 157 (290)
|++|+.|++|++||+.+++.+..+ .+|...|.+++|
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 445555566666666666665555 457788999999
Q ss_pred cC-CCCEEEEeeCCCeEEEEECC-cccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC-
Q 022910 158 HP-RGHIVLAGSEDSTVWMWNAD-RAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY- 234 (290)
Q Consensus 158 ~~-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 234 (290)
++ ++++|++|+.||.|++||++ ..+.+..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+..+.....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 293 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR 293 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc
Confidence 87 78999999999999999998 4577888999999999999999999999999999999999999998887765321
Q ss_pred ---cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE----ccCCCcEEEEEEecCC
Q 022910 235 ---HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL----VSHTDSIECIGFSRSE 290 (290)
Q Consensus 235 ---~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~----~~~~~~v~~i~~s~d~ 290 (290)
+...+++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCC
Confidence 2235899999999999999999999999999999998888 6799999999999986
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.5e-41 Score=274.71 Aligned_cols=226 Identities=26% Similarity=0.473 Sum_probs=211.9
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
.......+.+|.+.|++++|+| ++.+|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceeEEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 3556788899999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
+||+.+++.+..+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+..|..+|.+++|+|++++|++++.|
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcE
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI 281 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v 281 (290)
|.|++||+++++.+..+... +...+..++|+|++++|++++.||.|++||+++++++..+.+|...+
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 237 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 237 (312)
T ss_dssp SCEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS
T ss_pred CcEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce
Confidence 99999999999887776543 56789999999999999999999999999999999999999887643
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=281.08 Aligned_cols=233 Identities=24% Similarity=0.435 Sum_probs=203.7
Q ss_pred CCceeeeccCCc-CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee---eeccccCCEEEEEECCCCCEEEEEeCCC
Q 022910 54 DDSTHIFSGHSD-EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS---EIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (290)
Q Consensus 54 ~~~~~~~~~h~~-~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (290)
...+..+.+|.+ .|.+++|+| ++.+||+|+.|++|+||++.++.... ...+|...|.+++|+|++++|++++.|+
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 456788999998 999999999 78899999999999999998876432 2367999999999999999999999999
Q ss_pred cEEEEcCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc---cEEEeeecCCCCeEEEEEcCCCC
Q 022910 130 LVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 130 ~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
.|++|++..+. .+..+.+|...|.+++|+|++++|++|+.|+.|++||++++ ..+..+..|...|.+++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999988764 56788899999999999999999999999999999999875 34667788999999999999999
Q ss_pred EEEEEeCCCeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC---------------
Q 022910 205 TICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT--------------- 267 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~--------------- 267 (290)
+|++++.|+.|++||.+++.. ...+.+ |...|++++|+|++++|++|+.||+|++|+...
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~---h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEG---HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecC---CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCc
Confidence 999999999999999987753 345555 788999999999999999999999999999632
Q ss_pred CcEEEEEcc-CCCcEEEEEEecCC
Q 022910 268 GKVVSSLVS-HTDSIECIGFSRSE 290 (290)
Q Consensus 268 ~~~~~~~~~-~~~~v~~i~~s~d~ 290 (290)
.+++..+.+ |...|++++|+|++
T Consensus 241 ~~~~~~~~~~h~~~v~~v~~~~~~ 264 (345)
T 3fm0_A 241 WKCICTLSGFHSRTIYDIAWCQLT 264 (345)
T ss_dssp EEEEEEECSSCSSCEEEEEECTTT
T ss_pred cceeEEecCCCCCcEEEEEEecCC
Confidence 235566665 88899999999874
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-40 Score=272.26 Aligned_cols=236 Identities=25% Similarity=0.422 Sum_probs=214.3
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|...|.+++|+| ++.+|++|+.|+.|++|++.+++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 55 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 55 GKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 133 (312)
T ss_dssp CCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred cccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 456778899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee-cCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
||+.+++.+..+..|..+|.+++|+|++++|++++.||.|++||+++++.+..+. .+..++..++|+|++++|++++.|
T Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 9999999999999999999999999999999999999999999999998877654 466789999999999999999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
|.|++||+++++.+..+..+......+......+++.+|++|+.||.|++||+.+++++..+.+|...|.+++|+|++
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 291 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 291 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSS
T ss_pred CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcC
Confidence 999999999999988887754322333333344688999999999999999999999999999999999999999975
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-41 Score=279.67 Aligned_cols=234 Identities=21% Similarity=0.339 Sum_probs=202.1
Q ss_pred CCCCceeeeccCCcCEEEEEE-----CCCCCcEEEEecCCCcEEEEEccCC-------eeeeeeccccCCEEEEEECCCC
Q 022910 52 QPDDSTHIFSGHSDEVYSVAC-----SPTDATLVATGGGDDKGFFWRINQG-------DWASEIQGHKDSVSSLAFSMDG 119 (290)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~-----~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~i~~~~~~~~~ 119 (290)
........|.+|.+.|++++| ++.++.+|++|+.|++|++|++... .....+.+|...|.+++|+|++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 345567889999999999999 6657789999999999999999753 4566788999999999999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee--ecCCCCeEEE
Q 022910 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF--SGHGSSVTCG 197 (290)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~ 197 (290)
.++++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......... ..|...|.++
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999844332222 2688899999
Q ss_pred EEcCCC----------CEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 198 DFTPDG----------KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 198 ~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
+|+|++ .+|++++.||.|++||. ..+....+.. |...|++++|+|++++|++|+.||.|++||+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA---HESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC---ccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999986 78999999999999994 4566666665 788999999999999999999999999999944
Q ss_pred -CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 -GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 -~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
..+...+. +...|++++|+|++
T Consensus 245 ~~~~~~~~~-~~~~v~~v~~sp~~ 267 (343)
T 2xzm_R 245 LTYPQREFD-AGSTINQIAFNPKL 267 (343)
T ss_dssp CSSCSEEEE-CSSCEEEEEECSSS
T ss_pred Ccccceeec-CCCcEEEEEECCCC
Confidence 44444443 45679999999985
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.4e-41 Score=273.07 Aligned_cols=230 Identities=20% Similarity=0.294 Sum_probs=198.9
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC--CeeeeeeccccCCEEEEEECCC--CCEEEEEeCCCcEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ--GDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLVQ 132 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~ 132 (290)
+..+.+|.+.|++++|+| ++.+||+|+.|++|+||++.. .+.+..+.+|..+|.+++|+|. +++|++++.|++|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp CEECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred ceeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 457889999999999999 788999999999999999974 3677889999999999999864 88999999999999
Q ss_pred EEcCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEeeCCCeEEEEECCccc--EEEeeecCCCCeEEEEEcCC----
Q 022910 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPD---- 202 (290)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~---- 202 (290)
+||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+++.. ....+.+|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 55677789999999999997 8899999999999999998763 24566789999999999996
Q ss_pred ---------CCEEEEEeCCCeEEEEcCCCCe----eeEEEeCCCCcccCeEEEEEcCCC---CEEEEEeCCCcEEEEEcC
Q 022910 203 ---------GKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADS---TLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 203 ---------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~wd~~ 266 (290)
+++|++|+.|+.|++||++++. ....+.+ |...|.+++|+|++ .+|++++.|++|++|++.
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~---H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC---CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5799999999999999998765 3445554 88899999999984 899999999999999998
Q ss_pred CCc---EEEEE--ccCCCcEEEEEEecCC
Q 022910 267 TGK---VVSSL--VSHTDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~---~~~~~--~~~~~~v~~i~~s~d~ 290 (290)
+.. ....+ ..|...|.+++|+|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 266 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSG 266 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSS
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCC
Confidence 743 22333 4678899999999986
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-41 Score=276.63 Aligned_cols=231 Identities=22% Similarity=0.371 Sum_probs=196.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC--eeeeee-cc-ccCCEEEEEECCCCCEEEEEeCCC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEI-QG-HKDSVSSLAFSMDGQLLASGGLDG 129 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~dg 129 (290)
.+.+..+.+|.++|.+++|+| + +|++|+.|++|++|++..+ .....+ .. |...|.+++|+|++++|++++.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 456788999999999999998 4 8999999999999999875 344455 34 999999999999999999999999
Q ss_pred cEEEEcCCC-------CceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCc----ccEEEeeecCCCCeEEEE
Q 022910 130 LVQIWDPSS-------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGD 198 (290)
Q Consensus 130 ~i~i~d~~~-------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~ 198 (290)
+|+||++.. .+.+..+.+|...|.+++|+|++++|++|+.|+.|++||++. .+++..+.+|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999999853 345677889999999999999999999999999999999953 256778889999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEcCCCC--eeeEEEeCCCCcccCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCC------
Q 022910 199 FTPDGKTICTGSDDATLRVWNPKSG--ENIHVIRGHPYHTEGLTCLTISAD--STLALSGSKDGSVHMVNITTG------ 268 (290)
Q Consensus 199 ~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~------ 268 (290)
|+|++.+|++++.|+.|++||..++ +++..+.+ |...|.+++|+|+ +.+|++|+.|++|++|++.++
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG---HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC---CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 9999999999999999999998776 45666665 7889999999998 678999999999999998765
Q ss_pred --cEEEEEcc-CCCcEEEEEEecCC
Q 022910 269 --KVVSSLVS-HTDSIECIGFSRSE 290 (290)
Q Consensus 269 --~~~~~~~~-~~~~v~~i~~s~d~ 290 (290)
.++..+.. |...|++++|++++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eeEEeeecccccccceEEEEEcCCC
Confidence 45566665 89999999999764
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4e-40 Score=270.60 Aligned_cols=230 Identities=20% Similarity=0.347 Sum_probs=209.9
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
..++..+.+|...|.+++|+| ++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++
T Consensus 55 ~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 55 GVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred cccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 346788999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCC------CCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEE
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPR------GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC 207 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 207 (290)
|++. ++.+..+.+|...+.++.|+|. +..|++++.|+.|++||+++.+....+.+|...|.+++|+|++++|+
T Consensus 134 wd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp EETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred EECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE
Confidence 9986 5667788889999999999985 44899999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc--------CCC
Q 022910 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS--------HTD 279 (290)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--------~~~ 279 (290)
+++.||.|++||+++++.+..+.. ...|.+++|+|++.+|++++.+ .|++|++..+..+..+.. |..
T Consensus 213 s~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAKKAMYTLSA----QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp EEETTCEEEEEETTTTEEEEEEEC----CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred EEeCCCeEEEEECCCCcEEEEecC----CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCc
Confidence 999999999999999998888873 4679999999999999988755 599999998888877753 356
Q ss_pred cEEEEEEecCC
Q 022910 280 SIECIGFSRSE 290 (290)
Q Consensus 280 ~v~~i~~s~d~ 290 (290)
.|.+++|+|||
T Consensus 288 ~v~~~~~spdg 298 (319)
T 3frx_A 288 HAVSLAWSADG 298 (319)
T ss_dssp CEEEEEECTTS
T ss_pred ceeEEEECCCC
Confidence 79999999996
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.1e-41 Score=279.62 Aligned_cols=228 Identities=21% Similarity=0.288 Sum_probs=195.1
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee----eeccccCCEEEEEECCCCCEEEEEeCCCc
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS----EIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (290)
.......+|...|++++|+| ++.++ +++.||+|+|||+.+++... ...+|...|++++|+|++++|++++.|+.
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~-d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVS-EKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp GGCSEEEECSSCEEEEEEET-TTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred eEecccCCCCCCEEEEEEcC-CCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 34455678999999999999 55554 67789999999998876543 33479999999999999999999999999
Q ss_pred EEEEcCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeee--cCCCCeEEEEEcCC-CCEE
Q 022910 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTPD-GKTI 206 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l 206 (290)
|++||+.+++.+..+..|...|++++|+|++. ++++++.||.|++||+++++....+. .+...+.+++|+|+ +.+|
T Consensus 163 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 163 VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence 99999999999999999999999999999875 78999999999999999988766543 46778999999996 5788
Q ss_pred EEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEE
Q 022910 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (290)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~ 285 (290)
++|+.|+.|++||+++++.+..+.. |...|++++|+|++ ++|++|+.||+|++||+++++++..+ +|.+.|++|+
T Consensus 243 a~g~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va 318 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPDSAQTSAV---HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA 318 (357)
T ss_dssp EEEESSSCEEEEESSCGGGCEEECC---CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE
T ss_pred EEeecccceeEEECCCCcEeEEEec---cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE
Confidence 9999999999999999999888877 78899999999986 68999999999999999999887655 7999999999
Q ss_pred Eec
Q 022910 286 FSR 288 (290)
Q Consensus 286 ~s~ 288 (290)
|+|
T Consensus 319 fsP 321 (357)
T 4g56_B 319 WSP 321 (357)
T ss_dssp ECS
T ss_pred EeC
Confidence 998
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.1e-40 Score=293.01 Aligned_cols=234 Identities=23% Similarity=0.349 Sum_probs=207.5
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC--eeeeeeccccCCEEEEEECCCCCEEEEEeCC---
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLD--- 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--- 128 (290)
......|.+|...|++++|+| ++.+||+|+.||+|+|||+.++ .....+.+|.++|.+++|+|++++|++++.+
T Consensus 49 ~~~~~~~~~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred cccCeEecCCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 457788999999999999999 8899999999999999999754 3455678899999999999999999998865
Q ss_pred -CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEE
Q 022910 129 -GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (290)
Q Consensus 129 -g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 206 (290)
+.|++|| .++....+.+|...|.+++|+|++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++++|
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence 4788887 4566677889999999999999987 69999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEcCCCCeeeEEEeCC----CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE---------
Q 022910 207 CTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS--------- 273 (290)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~--------- 273 (290)
++++.|+.|++||+.+++....+... ..|...|.+++|+|++++|++++.|++|++||+.+++++.+
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 99999999999999999887776421 13888999999999999999999999999999998776543
Q ss_pred ----------------------------------EccCCCcEEEEEEecCC
Q 022910 274 ----------------------------------LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 274 ----------------------------------~~~~~~~v~~i~~s~d~ 290 (290)
+.+|...|++++|+|+|
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg 336 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG 336 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC
Confidence 35788999999999986
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-39 Score=274.71 Aligned_cols=218 Identities=30% Similarity=0.478 Sum_probs=198.0
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (290)
.|.+++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 599999999 7889999999999999999999999999999999999999999999999999999999999999888777
Q ss_pred ecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEee-------ecCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 022910 146 EGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF-------SGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 146 ~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 217 (290)
. +...+.+++|+| ++++|++|+.||.|++||+++++.+..+ .+|...|.+++|+|++++|++++.||.|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 6 455699999999 8999999999999999999998877766 568899999999999999999999999999
Q ss_pred EcCCCCe------------eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEE
Q 022910 218 WNPKSGE------------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (290)
Q Consensus 218 ~d~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~ 285 (290)
||+++.. +...+.+ |...|.+++|+|++.+|++|+.||.|++||+.+++++..+.+|.+.|.+++
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIG---HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp EEC---------------CEEEEEEC---CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEec---ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE
Confidence 9997643 2334444 778899999999999999999999999999999999999999999999999
Q ss_pred Eec
Q 022910 286 FSR 288 (290)
Q Consensus 286 ~s~ 288 (290)
|+|
T Consensus 360 ~~~ 362 (393)
T 1erj_A 360 VAN 362 (393)
T ss_dssp ECS
T ss_pred ecC
Confidence 986
No 22
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=270.98 Aligned_cols=228 Identities=24% Similarity=0.437 Sum_probs=197.6
Q ss_pred eccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC--eeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC
Q 022910 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (290)
..+|...|.+++|+| ++.+|++|+.|+++++|++..+ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 57 ~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp CSSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 478999999999999 7889999999999999999876 4567788999999999999999999999999999999998
Q ss_pred CCc---eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc--EEEeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 138 SGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 138 ~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
++. .+..+..|...|.+++|+|++++|++++.|+.|++|+++++. +...+.+|...|.+++|+|++++|++++.|
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp TTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 764 356677899999999999999999999999999999998764 456788999999999999999999999999
Q ss_pred CeEEEEcCCCC---------------eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--------
Q 022910 213 ATLRVWNPKSG---------------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK-------- 269 (290)
Q Consensus 213 g~i~i~d~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-------- 269 (290)
+.|++|+.... +++..+.+. |...|.+++|+|++.+|++++.|+.|++|+...+.
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF--HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS--CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCC--CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 99999996322 122333332 67889999999999999999999999999987542
Q ss_pred -EEEEEccCCCcEEEEEEecCC
Q 022910 270 -VVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 270 -~~~~~~~~~~~v~~i~~s~d~ 290 (290)
......+|...|++++|+|++
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSSS
T ss_pred EEeeecccccCcEeEeEEeCCC
Confidence 123346899999999999974
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=270.65 Aligned_cols=208 Identities=21% Similarity=0.243 Sum_probs=182.7
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCC-EEEEEeCCCcEEEEcC
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDP 136 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~ 136 (290)
..+.+|.+.|++++|+| ++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +|++++.|++|++||+
T Consensus 121 ~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 121 FCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp EEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 34568999999999999 788999999999999999999999999999999999999999885 7899999999999999
Q ss_pred CCCceEEEEe--cCCCCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCC-CEEEEEeCC
Q 022910 137 SSGNLKCTLE--GPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG-KTICTGSDD 212 (290)
Q Consensus 137 ~~~~~~~~~~--~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d 212 (290)
.+++....+. .+...+.+++|+|+ +++|++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++|+.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 200 RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred cccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 9999887764 35567999999995 5689999999999999999999999999999999999999987 578999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcE
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~ 270 (290)
++|+|||+++++... +.+ |...|++++|+|++. +|++|+.||+|++|++.+...
T Consensus 280 ~~i~vwd~~~~~~~~-~~~---H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 280 CSLAVLDSSLSELFR-SQA---HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SCEEEECTTCCEEEE-ECC---CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEECCCCcEEE-EcC---CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999999887653 444 889999999999876 677899999999999987543
No 24
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.2e-41 Score=274.06 Aligned_cols=233 Identities=19% Similarity=0.301 Sum_probs=191.4
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECC--CCCEEEEEeCCCcEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~ 132 (290)
...+.+|.+.|++++|+| ++.+||+|+.|++|+|||+.++. .+..+.+|..+|.+++|+| ++++|++++.|++|+
T Consensus 6 ~~~~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp --------CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eeecccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 345679999999999999 78899999999999999998864 4667889999999999986 488999999999999
Q ss_pred EEcCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEeeCCCeEEEEECCccc---EEEeeecCCCCeEEEEEcCC---
Q 022910 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA---YLNMFSGHGSSVTCGDFTPD--- 202 (290)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~--- 202 (290)
+||+.+++ ....+.+|...|.+++|+|+ +.+|++|+.|+.|++|+++... ....+.+|...|.+++|+|+
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998874 56677889999999999997 7899999999999999998763 24556678899999999997
Q ss_pred --------------CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC----CEEEEEeCCCcEEEEE
Q 022910 203 --------------GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS----TLALSGSKDGSVHMVN 264 (290)
Q Consensus 203 --------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~wd 264 (290)
+++|++|+.|+.|++||++.......+.....|...|.+++|+|++ .+|++|+.||+|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 4689999999999999997653222333333488999999999986 8999999999999999
Q ss_pred cCCCc----EEEEEccCCCcEEEEEEecCC
Q 022910 265 ITTGK----VVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 265 ~~~~~----~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+.+.. ....+..|...|++++|+|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g 274 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITA 274 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTT
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCC
Confidence 87631 223456788999999999986
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-39 Score=288.38 Aligned_cols=236 Identities=23% Similarity=0.425 Sum_probs=203.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|...|++++|+|+++.+|++|+.|++|++|+..+++....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 34566789999999999999965567999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEe-------cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEE---------------------
Q 022910 134 WDPSSGNLKCTLE-------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN--------------------- 185 (290)
Q Consensus 134 ~d~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------- 185 (290)
|++.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+++++.+.
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 9999999888874 689999999999999999999999999999998765443
Q ss_pred ----------------------eeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeC-CC---------
Q 022910 186 ----------------------MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRG-HP--------- 233 (290)
Q Consensus 186 ----------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~--------- 233 (290)
.+.+|...|.+++|+|++++|++++.|+.|++||+.++.....+.. +.
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s 376 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 376 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEEC
Confidence 3346888999999999999999999999999999987654322100 00
Q ss_pred ---------------------------------------------------------------------CcccCeEEEEE
Q 022910 234 ---------------------------------------------------------------------YHTEGLTCLTI 244 (290)
Q Consensus 234 ---------------------------------------------------------------------~~~~~v~~~~~ 244 (290)
.+...+.+++|
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL 456 (611)
T ss_dssp TTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEE
Confidence 01235788999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCcE--EEEEccCCCcEEEEEEecCC
Q 022910 245 SADSTLALSGSKDGSVHMVNITTGKV--VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 245 ~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~~~~~~~v~~i~~s~d~ 290 (290)
+|+|++|++|+.|++|++|++.+++. +.. .+|...|++++|||||
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg 503 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG 503 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCC
Confidence 99999999999999999999987654 334 6799999999999986
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-39 Score=267.46 Aligned_cols=229 Identities=19% Similarity=0.301 Sum_probs=196.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
..+...+.+|...|.+++|+| ++.++++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 66 ~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~ 144 (343)
T 2xzm_R 66 GIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKL 144 (343)
T ss_dssp EEEEEEECCCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEE
T ss_pred ccccchhccCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEE
Confidence 345778999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEe---cCCCCEEEEEEcCCC----------CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEc
Q 022910 134 WDPSSGNLKCTLE---GPGGGVEWVSWHPRG----------HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT 200 (290)
Q Consensus 134 ~d~~~~~~~~~~~---~~~~~i~~i~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 200 (290)
||+... ...... .|...|.+++|+|++ .+|++++.||.|++||. ..+....+.+|...|.+++|+
T Consensus 145 wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 145 WNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS 222 (343)
T ss_dssp EESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC
T ss_pred EeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEEC
Confidence 999843 333333 577889999999986 79999999999999994 556677888999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEcCCC-CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE--EEc--
Q 022910 201 PDGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS--SLV-- 275 (290)
Q Consensus 201 ~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~-- 275 (290)
|++++|++|+.||.|++||++. ......+. +...|.+++|+|++.+|+++ .|+.|++|++.+++... .+.
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~ 297 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE 297 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC
Confidence 9999999999999999999954 34444443 34569999999999888755 57889999998766433 443
Q ss_pred ---------cCCCcEEEEEEecCC
Q 022910 276 ---------SHTDSIECIGFSRSE 290 (290)
Q Consensus 276 ---------~~~~~v~~i~~s~d~ 290 (290)
+|...|++++|+|+|
T Consensus 298 ~~~~~~~~~~~~~~v~~~~~sp~g 321 (343)
T 2xzm_R 298 PITKAEGQKGKNPQCTSLAWNALG 321 (343)
T ss_dssp SGGGBTTBCCSCCCEEEEEECSSS
T ss_pred cchhhhhhcCCCCceEEEEECCCC
Confidence 677899999999986
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-39 Score=271.58 Aligned_cols=227 Identities=26% Similarity=0.472 Sum_probs=199.7
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC------------------CEEEEEECCCCCEE
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD------------------SVSSLAFSMDGQLL 122 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l 122 (290)
.+|.+.|.+++|+| ++.+||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++|
T Consensus 61 ~~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 61 LDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred cCCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 37999999999999 778888876 78999999999988877765432 49999999999999
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcC-
Q 022910 123 ASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP- 201 (290)
Q Consensus 123 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~- 201 (290)
++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999998877776 567899999999
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCC----CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC----------
Q 022910 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT---------- 267 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~---------- 267 (290)
++++|++|+.||.|++||++++..+..+... ..|...|.+++|+|++++|++|+.||.|++||+++
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8999999999999999999998877766321 23788999999999999999999999999999975
Q ss_pred --CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 --GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 --~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+.+...+.+|...|.+++|+|++
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~ 322 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQND 322 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGG
T ss_pred CCCcceEEEecccCcEEEEEECCCC
Confidence 34567788999999999999975
No 28
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-41 Score=284.29 Aligned_cols=228 Identities=11% Similarity=0.133 Sum_probs=196.9
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC--eeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEc
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (290)
..+..|.++|++++|+| ++.+|++|+.|+.|++|++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 5 ~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred eeEecCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45566788999999999 7889999999999999999988 77888999999999999999999999999999999999
Q ss_pred CCCCc---eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc---EEEeeec-CCCCeEEEEEcCCCCEEEE
Q 022910 136 PSSGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA---YLNMFSG-HGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 136 ~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~ 208 (290)
+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99877 667778899999999999999999999999999999999887 3677777 9999999999999999999
Q ss_pred EeCCCeEEEEcCCC------------------CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 022910 209 GSDDATLRVWNPKS------------------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 209 ~~~dg~i~i~d~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
++.|+.|++||++. ++.+..+ .|...|++++|+|++++|++++.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999999853 2233333 4888999999999999999999999999999999987
Q ss_pred ----EEEEccCCCcEEEEEEecCC
Q 022910 271 ----VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 271 ----~~~~~~~~~~v~~i~~s~d~ 290 (290)
+..+.+|..+|++++|+|+|
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~ 263 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANES 263 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETT
T ss_pred cceeeEeecCCCCceEEEEEcCCC
Confidence 88889999999999999986
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.9e-39 Score=291.61 Aligned_cols=232 Identities=27% Similarity=0.455 Sum_probs=209.4
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC-----eeeeeeccccCCEEEEEECCCCCEEEEEeCCC
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----DWASEIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (290)
.....+++|.+.|++++|+|+++.+|++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++|+.||
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3456789999999999999977789999999999999999763 34567889999999999999999999999999
Q ss_pred cEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee---ecCCCCeEEEEEcCCC--C
Q 022910 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTPDG--K 204 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~--~ 204 (290)
+|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|++ .
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 9999999999999999999999999999999999999999999999998765443332 4588899999999976 6
Q ss_pred EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEE
Q 022910 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECI 284 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i 284 (290)
+|++++.|+.|++||+++++....+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+.. ...|.++
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~ 608 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHAL 608 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEE
Confidence 899999999999999999988888876 788999999999999999999999999999999999988875 5689999
Q ss_pred EEecCC
Q 022910 285 GFSRSE 290 (290)
Q Consensus 285 ~~s~d~ 290 (290)
+|+|++
T Consensus 609 ~~sp~~ 614 (694)
T 3dm0_A 609 CFSPNR 614 (694)
T ss_dssp EECSSS
T ss_pred EEcCCC
Confidence 999985
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-39 Score=265.67 Aligned_cols=228 Identities=26% Similarity=0.443 Sum_probs=188.8
Q ss_pred eeee-cc-CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC-------CeeeeeeccccCCEEEEEECCCCCEEEEEeC
Q 022910 57 THIF-SG-HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-------GDWASEIQGHKDSVSSLAFSMDGQLLASGGL 127 (290)
Q Consensus 57 ~~~~-~~-h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 127 (290)
...+ .+ |.+.|.+++|+| ++.+|++|+.|++|++|++.. .+.+..+.+|...|.+++|+|++++|++++.
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp EEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred EEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 4445 44 999999999999 788999999999999999853 3456778899999999999999999999999
Q ss_pred CCcEEEEcCCCC----ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc--cEEEeeecCCCCeEEEEEcC
Q 022910 128 DGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA--AYLNMFSGHGSSVTCGDFTP 201 (290)
Q Consensus 128 dg~i~i~d~~~~----~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~ 201 (290)
|++|++||+... +.+..+..|...|.+++|+|++.+|++++.|+.|++|++.++ +++..+.+|...|.+++|+|
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC
Confidence 999999999432 456778889999999999999999999999999999998765 67888999999999999999
Q ss_pred C--CCEEEEEeCCCeEEEEcCCCC--------eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--
Q 022910 202 D--GKTICTGSDDATLRVWNPKSG--------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK-- 269 (290)
Q Consensus 202 ~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-- 269 (290)
+ +.+|++++.|++|++||++.+ .....+.. .|...|.+++|++++ +|++++.||.|++|+..+++
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~ 284 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD--VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS--CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE
T ss_pred CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc--ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE
Confidence 8 678999999999999998754 22222222 277899999999765 89999999999999998774
Q ss_pred EEEE-EccCCC-cEEEEEEec
Q 022910 270 VVSS-LVSHTD-SIECIGFSR 288 (290)
Q Consensus 270 ~~~~-~~~~~~-~v~~i~~s~ 288 (290)
.+.. +.+|.. .|++++|+|
T Consensus 285 ~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 285 VFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp EEEEESCTTTTSCEEEEEEC-
T ss_pred EEeccccccccceEEEEEEec
Confidence 3433 357877 899999998
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-38 Score=262.09 Aligned_cols=231 Identities=16% Similarity=0.272 Sum_probs=208.4
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|.+.|++++|+| ++.+|++|+.||.|++|++.+++.+..+..|...|.+++|+|++++|++++.||.|++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 445566899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCC------------------------------------------------------------CEE
Q 022910 134 WDPSSGNLKCTLEGPGG------------------------------------------------------------GVE 153 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~------------------------------------------------------------~i~ 153 (290)
||+.+++.+..+. +.. .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9998877655543 222 566
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCc-ccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCC
Q 022910 154 WVSWHPRGHIVLAGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGH 232 (290)
Q Consensus 154 ~i~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 232 (290)
+++|+|++++|++++.+|.|++||+++ .+.+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 257 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-- 257 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--
Confidence 777777777888888889999999988 67788888899999999999999999999999999999999999888887
Q ss_pred CCcccCeEEEEEcCCCCEEEEEeCCC--------------cEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 233 PYHTEGLTCLTISADSTLALSGSKDG--------------SVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~l~~~~~dg--------------~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+...+..++|+|+++++++++.++ .|++||+.+++.+..+.+|...|++++|+|+|
T Consensus 258 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 258 --TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp --CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred --CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 577899999999999999999988 89999999999999999999999999999985
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-38 Score=281.40 Aligned_cols=229 Identities=33% Similarity=0.584 Sum_probs=211.6
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
....+..+.+|...|.+++|+| ++.+|++|+.+|.|++|+. +++.+..+..|...|.+++|+|++++|++++.|+.|+
T Consensus 333 ~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 333 NGQHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 4556778899999999999999 7889999999999999995 5677888889999999999999999999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
+|+. +++.+..+..|...|++++|+|++++|++++.|+.|++|++ +++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 9995 57788889999999999999999999999999999999996 567788889999999999999999999999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+.|++||. +++.+..+.+ |...|++++|+|++++|++++.||.|++||. +++++..+.+|.+.|++++|+|||
T Consensus 489 ~~i~iw~~-~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDG 561 (577)
T ss_dssp SEEEEEET-TSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTS
T ss_pred CEEEEEcC-CCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCC
Confidence 99999995 6777788876 7889999999999999999999999999995 789999999999999999999986
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.2e-40 Score=273.53 Aligned_cols=230 Identities=16% Similarity=0.243 Sum_probs=190.4
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecC------CCcEEEEEccCCeeee----eeccccCCEEEEEECCCCCEEEEEeC
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGG------DDKGFFWRINQGDWAS----EIQGHKDSVSSLAFSMDGQLLASGGL 127 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~ 127 (290)
....+|...|++++|+| ++.+||+|+. |+.|++|+..++.... ....|...|.+++|+|++. +++++.
T Consensus 36 ~~p~~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~ 113 (357)
T 4g56_B 36 TAPACMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASD 113 (357)
T ss_dssp ----CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEET
T ss_pred CCcccccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEEC
Confidence 34467999999999999 8889999987 7789999987765433 3346888999999999875 556788
Q ss_pred CCcEEEEcCCCCceEE----EEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCC
Q 022910 128 DGLVQIWDPSSGNLKC----TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 128 dg~i~i~d~~~~~~~~----~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
||+|+|||+.+++... ...+|...|++++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 9999999998876542 334688899999999999999999999999999999999999999999999999999987
Q ss_pred C-EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcE
Q 022910 204 K-TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI 281 (290)
Q Consensus 204 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v 281 (290)
. ++++++.||.|++||+++++....+.... +...+++++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCA-SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTT-CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeecc-ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 4 78999999999999999988766554332 6778999999996 5789999999999999999999999999999999
Q ss_pred EEEEEecCC
Q 022910 282 ECIGFSRSE 290 (290)
Q Consensus 282 ~~i~~s~d~ 290 (290)
++++|+|++
T Consensus 273 ~~l~~sp~~ 281 (357)
T 4g56_B 273 TGLAYSYHS 281 (357)
T ss_dssp EEEEECSSS
T ss_pred EEEEEcCCC
Confidence 999999975
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-39 Score=268.90 Aligned_cols=232 Identities=19% Similarity=0.303 Sum_probs=202.3
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc--CCeeeeeeccccCCEEEEEECCC--CCEEEEEeCCCc
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGL 130 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~ 130 (290)
.++..+.+|.+.|++++|+| ++.+|++|+.||.|++|++. +++.+..+.+|...|++++|+++ +++|++++.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 46788999999999999999 78899999999999999998 56677788899999999999987 899999999999
Q ss_pred EEEEcCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEeeCCCeEEEEECCccc--EEEeeecCCCCeEEEEEcC---
Q 022910 131 VQIWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTP--- 201 (290)
Q Consensus 131 i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~--- 201 (290)
|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.+|.|++||+++.. ....+..|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 67777889999999999999 9999999999999999998873 4456678999999999999
Q ss_pred ----------CCCEEEEEeCCCeEEEEcCCCCeee----EEEeCCCCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEE
Q 022910 202 ----------DGKTICTGSDDATLRVWNPKSGENI----HVIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVN 264 (290)
Q Consensus 202 ----------~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~wd 264 (290)
++.+|++++.||.|++||++++... ..+.. |...|.+++|+|+ +.+|++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec---ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999999999876532 33443 7889999999999 89999999999999999
Q ss_pred cCCCc---EEEEE--ccCCCcEEEEEEecCC
Q 022910 265 ITTGK---VVSSL--VSHTDSIECIGFSRSE 290 (290)
Q Consensus 265 ~~~~~---~~~~~--~~~~~~v~~i~~s~d~ 290 (290)
+.++. ....+ ..|...|++++|+|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 268 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSG 268 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSS
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCC
Confidence 99864 22333 3488899999999986
No 35
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=265.83 Aligned_cols=240 Identities=15% Similarity=0.249 Sum_probs=203.7
Q ss_pred CCCCCCceeeeccCCcCEEEEEECCCC--CcEEEEecCCCcEEEEEccC-Ceee-eeeccccCCEEEEEECCCCCEEEEE
Q 022910 50 TEQPDDSTHIFSGHSDEVYSVACSPTD--ATLVATGGGDDKGFFWRINQ-GDWA-SEIQGHKDSVSSLAFSMDGQLLASG 125 (290)
Q Consensus 50 ~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~~~~~dg~i~iw~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~ 125 (290)
...+...+..+.+|.+.|++++|+|+. +.+|++|+.||.|++|++.+ +..+ ..+.+|...|++++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 445678889999999999999999954 68999999999999999997 4444 6788899999999999999999999
Q ss_pred eCCCcEEEEcCCCCceEEEEecCCCCEEEEEE--cCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC------------
Q 022910 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSW--HPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG------------ 191 (290)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------ 191 (290)
+.||.|++||+.+++.+. +..|...|.+++| +|++++|++++.||.|++||+++++.+..+..+.
T Consensus 105 ~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp ETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred cCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 999999999999988766 5568899999999 8999999999999999999999887655554332
Q ss_pred -----------------------------CCeEEEEEcCCCCE----EEEEeCCCeEEEEcCCCC---eeeEEEeCCCC-
Q 022910 192 -----------------------------SSVTCGDFTPDGKT----ICTGSDDATLRVWNPKSG---ENIHVIRGHPY- 234 (290)
Q Consensus 192 -----------------------------~~i~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~- 234 (290)
..+.++.+.+.... +++++.||.|++|+++.. .....+..+..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 23444555444333 999999999999999887 45566665321
Q ss_pred --------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 235 --------HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 235 --------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
|...|++++|+|++++|++|+.||.|++||+.+++++..+..|..+|++++|+|+|
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTS
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCC
Confidence 11279999999999999999999999999999999999999999999999999986
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-38 Score=266.70 Aligned_cols=228 Identities=18% Similarity=0.212 Sum_probs=205.4
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcC
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (290)
.+..|.++|++++|+| ++.+|++|+.++.|++|++.+++ .+..+.+|...|.+++|+|++++|++++.||.|++|++
T Consensus 3 ~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 4566999999999999 78899999999999999999987 78888899999999999999999999999999999999
Q ss_pred CCCceEEEE--ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE----EEeeecCCCCeEEEEEcCCCCEEEEEe
Q 022910 137 SSGNLKCTL--EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 137 ~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
.+++....+ ..|...|.+++|+|++++|++++.+|.|++|+++.... ......|...|.+++|+|++++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 888755444 56888999999999999999999999999999988762 333356889999999999999999999
Q ss_pred CCCeEEEEcCC------------------CCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 022910 211 DDATLRVWNPK------------------SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS 272 (290)
Q Consensus 211 ~dg~i~i~d~~------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 272 (290)
.||.|++||++ .++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++++.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS---SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC---CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCC---CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99999999954 5666666654 78899999999999999999999999999999999999
Q ss_pred EEccCCCcEEEEEEecCC
Q 022910 273 SLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 273 ~~~~~~~~v~~i~~s~d~ 290 (290)
.+..|..+|++++|+|++
T Consensus 239 ~~~~~~~~v~~~~~~~~~ 256 (372)
T 1k8k_C 239 TLASETLPLLAVTFITES 256 (372)
T ss_dssp EEECSSCCEEEEEEEETT
T ss_pred EEccCCCCeEEEEEecCC
Confidence 999999999999999985
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-38 Score=263.08 Aligned_cols=233 Identities=20% Similarity=0.333 Sum_probs=203.5
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC----eeeeeeccccCCEEEEEECC--CCCEEEEEeCCC
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSM--DGQLLASGGLDG 129 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg 129 (290)
....+.+|.+.|++++|+| ++.+|++|+.||.|++|++.++ +....+.+|...|.+++|+| ++++|++++.||
T Consensus 3 ~~~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCCEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 4567889999999999999 7889999999999999999876 46667788999999999999 589999999999
Q ss_pred cEEEEcCCCC---------ceEEEEecCCCCEEEEEEcCC--CCEEEEeeCCCeEEEEECCcccEEEeee----------
Q 022910 130 LVQIWDPSSG---------NLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAAYLNMFS---------- 188 (290)
Q Consensus 130 ~i~i~d~~~~---------~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------- 188 (290)
.|++||+.++ +.+..+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999887 557778889999999999999 9999999999999999998876544332
Q ss_pred ---cCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC----CEEEEEeCCC
Q 022910 189 ---GHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS----TLALSGSKDG 258 (290)
Q Consensus 189 ---~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg 258 (290)
.+...+.+++|+|+ +.+|++++.++.+.+|+...+... .+.....|...|++++|+|++ ++|++|+.||
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLH-VAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEE-EEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCcee-eeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 57788999999997 899999999999988888776542 222223388899999999998 8999999999
Q ss_pred cEEEEEcCCC----------------------------------------------cEEEEEccCCCcEEEEEEecCC
Q 022910 259 SVHMVNITTG----------------------------------------------KVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 259 ~i~~wd~~~~----------------------------------------------~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.|++||++++ +++..+.+|...|++++|+|+|
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 9999999875 6788889999999999999986
No 38
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-38 Score=262.95 Aligned_cols=205 Identities=24% Similarity=0.469 Sum_probs=190.6
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (290)
.....+.+|.+.|.+++|++ ++. +++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~-~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLD-DNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEE-TTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCCCccEEEEEECC-CCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 45667889999999999998 554 7789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeec--CCCCeEEEEEcCCCCEEEEEeCC
Q 022910 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG--HGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
|+.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.. +...|.+++|+|++++|++|+.|
T Consensus 212 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC
Confidence 9999999999999999999999999999999999999999999999887776653 33579999999999999999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
|.|++||+.+++.+..+.+ |...|.+++|+|++.+|++|+.||.|++||
T Consensus 292 ~~i~vwd~~~~~~~~~~~~---h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAG---HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CeEEEEEcccCcEeeEeec---CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999998888887 788999999999999999999999999996
No 39
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.2e-39 Score=273.25 Aligned_cols=232 Identities=20% Similarity=0.341 Sum_probs=206.1
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC----------CeeeeeeccccCCEEEEEECCCCC-EEEE
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----------GDWASEIQGHKDSVSSLAFSMDGQ-LLAS 124 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 124 (290)
......+|.+.|++++|+|+++.+|++++.+|.|++|++.+ .+....+.+|...|.+++|+|++. +|++
T Consensus 120 ~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 34667889999999999996578999999999999999987 567778889999999999999988 9999
Q ss_pred EeCCCcEEEEcCCCCce-------EEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcc---cEEEeeecCCCC
Q 022910 125 GGLDGLVQIWDPSSGNL-------KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSS 193 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~-------~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~ 193 (290)
++.||.|++|++.++.. ...+..|...|.+++|+| ++.+|++++.+|.|++||++++ +.+..+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999987432 456678999999999999 6789999999999999999987 567778889999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEcCCC-CeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCC---
Q 022910 194 VTCGDFTPDGK-TICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITT--- 267 (290)
Q Consensus 194 i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~--- 267 (290)
|++++|+|++. +|++|+.||.|++||+++ ..++..+.. |...|++++|+|++. +|++++.||.|++||+..
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 99999999886 688999999999999998 456777776 788999999999885 799999999999999987
Q ss_pred -----------CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 -----------GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 -----------~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.+++..+.+|...|++++|+|++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 390 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390 (430)
T ss_dssp CCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS
T ss_pred ccCccccccCCcceEEEcCCCCCCceEEEECCCC
Confidence 47888889999999999999985
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-37 Score=257.00 Aligned_cols=233 Identities=26% Similarity=0.435 Sum_probs=209.4
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe-----eeeeeccccCCEEEEEECCCCCEEEEEeCC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----WASEIQGHKDSVSSLAFSMDGQLLASGGLD 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 128 (290)
.....+|+||.+.|++|+|+|+++.+|+||+.|++|+||++.+.+ ....+.+|...|.+++|+|++++|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 345567999999999999999768899999999999999987643 456778999999999999999999999999
Q ss_pred CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE-EEeeecCCCCeEEEEEcCCC--CE
Q 022910 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY-LNMFSGHGSSVTCGDFTPDG--KT 205 (290)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~--~~ 205 (290)
+.|++|+............+...+..+.+++.+++|++++.|+.+++||+..... .....+|...+..++|++++ .+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 9999999999998888888888999999999999999999999999999976644 34556788999999999854 57
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEE
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~ 285 (290)
+++++.|+.|++||+++++....+.. |...|++++|+|++++|++|+.||.|++||+++++++..+..+ ..|.+++
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIG---HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecC---CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 88999999999999999998888876 7889999999999999999999999999999999999988864 6899999
Q ss_pred EecCC
Q 022910 286 FSRSE 290 (290)
Q Consensus 286 ~s~d~ 290 (290)
|+|++
T Consensus 264 ~~~~~ 268 (340)
T 4aow_A 264 FSPNR 268 (340)
T ss_dssp ECSSS
T ss_pred cCCCC
Confidence 99974
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.3e-38 Score=261.13 Aligned_cols=206 Identities=23% Similarity=0.423 Sum_probs=190.9
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECC--CCCEEEEEeCCCcEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~ 132 (290)
.....+.+|.+.|.+++|+| ++..|++++.|++|++||+.+++.+..+.+|...|.+++|+| ++++|++|+.||.|+
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp GGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred ccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 45677889999999999999 777889999999999999999999999999999999999987 468999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecC--CCCeEEEEEcCCCCEEEEEe
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--GSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~ 210 (290)
+||+.+++++..+..|...|.+++|+|++.+|++|+.|++|++||+++.+.+..+..+ ...+.+++|+|++++|++|+
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999998877666543 35789999999999999999
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
.|+.|++||+.+++.+..+.+ |...|++++|+|++++|++|+.||+|++|+
T Consensus 304 ~d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999998888876 788999999999999999999999999995
No 42
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-38 Score=270.22 Aligned_cols=234 Identities=21% Similarity=0.397 Sum_probs=205.2
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC-------eeeeeeccccCCEEEEEECCCC-CEEEEEe
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-------DWASEIQGHKDSVSSLAFSMDG-QLLASGG 126 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~ 126 (290)
.....+.+|.+.|++++|+|.++.+|++|+.||.|++|++.++ +.+..+.+|...|.+++|+|++ .+|++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 4566788999999999999977789999999999999999987 5677888999999999999998 6999999
Q ss_pred CCCcEEEEcCCCCceEEEE--ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee-ecCCCC-eEEEEEcCC
Q 022910 127 LDGLVQIWDPSSGNLKCTL--EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSS-VTCGDFTPD 202 (290)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~~~ 202 (290)
.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|... +.++.|+|+
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 9999999999999999998 789999999999999999999999999999999999998888 677765 899999999
Q ss_pred CCEEEEE---eCCCeEEEEcCCCCee-eEEEeCCCCcccCeEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCcE-EEEEcc
Q 022910 203 GKTICTG---SDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALS-GSKDGSVHMVNITTGKV-VSSLVS 276 (290)
Q Consensus 203 ~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~~-~~~~~~ 276 (290)
+.+|++| +.++.|++||++++.. ....... +...+.+++|+|++++|++ |+.||.|++|++.+++. +..+..
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELD--TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC--CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEecc--CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 9999999 7899999999998765 3333211 5678999999999999865 55799999999999883 444443
Q ss_pred --CCCcEEEEEEecCC
Q 022910 277 --HTDSIECIGFSRSE 290 (290)
Q Consensus 277 --~~~~v~~i~~s~d~ 290 (290)
|..+|++++|+|++
T Consensus 310 ~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 310 FSSKESQRGMGYMPKR 325 (402)
T ss_dssp ECCSSCCSEEEECCGG
T ss_pred cccCCcccceEEeccc
Confidence 56899999999985
No 43
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.9e-38 Score=289.53 Aligned_cols=234 Identities=23% Similarity=0.331 Sum_probs=220.2
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
....+.+.+|.+.|++++|+| ++.+|++|+.+|.|++|++.+++.+..+..|..+|++++|+|++++|++++.||.|++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred cccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 456789999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-cEEEeeecCCCCeEEEEEcC-CCCEEEEEeC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGSD 211 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 211 (290)
|++.+++.+..+..|...|++++|+|++++|++++.+|.|++|+++++ .....+.+|...|.+++|+| ++.+|++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999987 67788888999999999999 8899999999
Q ss_pred CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
||.|++||+.++.....+... +...+.+++|+| ++.+|++++.||.|++||+.+++.+..+.+|...|++++|+|+
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 999999999988887777753 457899999999 9999999999999999999999999999999999999999998
Q ss_pred C
Q 022910 290 E 290 (290)
Q Consensus 290 ~ 290 (290)
|
T Consensus 240 ~ 240 (814)
T 3mkq_A 240 L 240 (814)
T ss_dssp S
T ss_pred C
Confidence 6
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.9e-37 Score=255.49 Aligned_cols=228 Identities=20% Similarity=0.355 Sum_probs=204.9
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee---ec--cccCCEEEEEECCCCCEEEEEeCCCc
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE---IQ--GHKDSVSSLAFSMDGQLLASGGLDGL 130 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~---~~--~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (290)
......+|...|++++|+| ++.+|++++ +|.|++|++.+++.... +. .|...|.+++|+|++++|++++.+|.
T Consensus 43 ~~~~~~~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EEEEEECCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred ccceeccCCCceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 3444558999999999999 778888888 99999999987653332 22 68899999999999999999999999
Q ss_pred EEEEcCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE
Q 022910 131 VQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 131 i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 208 (290)
|++|++.+++ ....+..|...+.+++|+|++++|++++.+|.|++||+++++.+..+..|...|.+++|+|++++|++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEE
Confidence 9999999887 56677788899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.||.|++||+++++.+..+. +...+.+++|+|++++|++++.+|.|++|++.+++.. .+..|...|++++|+|
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY 275 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT
T ss_pred EecCCcEEEEECCCCceEeeec----CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECC
Confidence 9999999999999998887775 6778999999999999999999999999999988764 6778999999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
++
T Consensus 276 ~~ 277 (337)
T 1gxr_A 276 CG 277 (337)
T ss_dssp TS
T ss_pred CC
Confidence 85
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.6e-37 Score=251.59 Aligned_cols=222 Identities=18% Similarity=0.275 Sum_probs=203.4
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (290)
+|...|.+++|+| ++.+|++++.+|.|++|++.+++ ....+..|...|.+++|+|++++|++++.+|.|++||+.++
T Consensus 95 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~ 173 (337)
T 1gxr_A 95 NRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 173 (337)
T ss_dssp CTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 8999999999999 77889999999999999999877 56677889999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEc
Q 022910 140 NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (290)
Q Consensus 140 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 219 (290)
+.+..+..|...+.+++|+|++++|++++.+|.|++||+++++.+..+. +...+.+++|+|++++|++++.++.|++||
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 9999999999999999999999999999999999999999998887775 678899999999999999999999999999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+++++.. .+.. |...+.+++|+|++++|++++.||.|++|++.+++.+... .|...|++++|+|++
T Consensus 253 ~~~~~~~-~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 318 (337)
T 1gxr_A 253 VNKPDKY-QLHL---HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD 318 (337)
T ss_dssp TTSSCEE-EECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTS
T ss_pred CCCCCeE-EEcC---CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCC
Confidence 9987754 3433 7889999999999999999999999999999999988554 478899999999985
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.1e-39 Score=274.03 Aligned_cols=222 Identities=17% Similarity=0.190 Sum_probs=189.6
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee--eeeeccccCCEEEEEECC-CCCEEEEEeCCCcEE
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQ 132 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 132 (290)
......+|...|+||+|+|.++.+||+|+.||.|+|||+.++.. ...+.+|.+.|++|+|+| ++++|++++.||+|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 34556788999999999998888999999999999999987654 345568999999999998 688999999999999
Q ss_pred EEcCCCCceEEEEec--CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCC-EEEEE
Q 022910 133 IWDPSSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTG 209 (290)
Q Consensus 133 i~d~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 209 (290)
+||+.++........ +...+.+++|+|++.+|++|+.+|.|++||++. +.+..+.+|...|.+++|+|++. +|+++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEe
Confidence 999987654433333 334678999999999999999999999999974 55777889999999999999875 78899
Q ss_pred eCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC
Q 022910 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT 278 (290)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 278 (290)
+.|+.|++||+++.+....+.....|...|++++|+|++++|++++.||.|++||+.+++....+..|.
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 999999999999877655554444588899999999999999999999999999999998888777654
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.4e-37 Score=261.47 Aligned_cols=219 Identities=18% Similarity=0.238 Sum_probs=193.3
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec--cccCCEEEEEECC-CCCEEEEEeCCC
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSM-DGQLLASGGLDG 129 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~dg 129 (290)
+......+.+|...|++++|+|++..+|++|+.||.|++|++.+++....+. +|...|.+++|+| ++++|++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3556778899999999999999444899999999999999999887776665 6999999999999 678999999999
Q ss_pred cEEEEcCCCCceEEEEecC---CCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCC-E
Q 022910 130 LVQIWDPSSGNLKCTLEGP---GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-T 205 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~---~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 205 (290)
.|++||+.+ ..+..+..+ ...|.+++|+|++++|++++.+|.|++||+ +++.+..+..|...|.+++|+|+++ +
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 999999986 455555444 378999999999999999999999999999 5778888999999999999999998 9
Q ss_pred EEEEeCCCeEEEEcCCC----CeeeEEEeCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEEccC
Q 022910 206 ICTGSDDATLRVWNPKS----GENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
|++++.|+.|++||+++ +..+..+. |...|++++|+| ++.+|++++.|+.|++||+++++.+..+..|
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 99999999999999997 55555553 788999999999 9999999999999999999998877777655
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.2e-38 Score=265.03 Aligned_cols=235 Identities=19% Similarity=0.235 Sum_probs=210.5
Q ss_pred CCceeeeccCCcCEEEEEECCCC----C---cEEEEecCCCcEEEEEccCCee-----eeeeccc-----cCCEEEEEEC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTD----A---TLVATGGGDDKGFFWRINQGDW-----ASEIQGH-----KDSVSSLAFS 116 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~----~---~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~-----~~~i~~~~~~ 116 (290)
...+..+.+|...|++++|+| + + .+|++++.||.|++|++.+++. ...+..| ...|.+++|+
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred CCcceEEecCCCcEEEEEEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEe
Confidence 457888999999999999999 6 7 8999999999999999998876 7788888 5999999999
Q ss_pred ----CCCCE-EEEEeCCCcEEEEcCCC------CceEE-----EEe-------cCCCCEEEEEEcCCCCEEEEeeCCCeE
Q 022910 117 ----MDGQL-LASGGLDGLVQIWDPSS------GNLKC-----TLE-------GPGGGVEWVSWHPRGHIVLAGSEDSTV 173 (290)
Q Consensus 117 ----~~~~~-l~~~~~dg~i~i~d~~~------~~~~~-----~~~-------~~~~~i~~i~~~~~~~~l~~~~~dg~i 173 (290)
|++++ |++++.+|.|++||+.+ ++.+. .+. .|...|.+++|+|++ +|++++.+|.|
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999998 66655 663 478889999999999 99999999999
Q ss_pred EEEECCcccEEEeeec---C---CCCeEEEEEcCCCCEEEEEeCC---CeEEEEcCCCCeeeEEEeCCC----------C
Q 022910 174 WMWNADRAAYLNMFSG---H---GSSVTCGDFTPDGKTICTGSDD---ATLRVWNPKSGENIHVIRGHP----------Y 234 (290)
Q Consensus 174 ~i~d~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~----------~ 234 (290)
++||+++++.+..+.. | ...|.+++|+|++++|++++.| |.|++||+++++.+..+.... .
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 9999999999999998 8 9999999999999999999999 999999999998888776511 1
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc------cC---------------CCcEEEEEEecCC
Q 022910 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV------SH---------------TDSIECIGFSRSE 290 (290)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~------~~---------------~~~v~~i~~s~d~ 290 (290)
|...|.+++|+|++++|++++.||.|++||+.+++++..+. +| ..+|++++|+|+|
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 57889999999999999999999999999999999999999 88 9999999999985
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-37 Score=278.82 Aligned_cols=231 Identities=21% Similarity=0.360 Sum_probs=204.5
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
....+.+.+|...|.+++|+| ++.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 420 ~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 498 (694)
T 3dm0_A 420 GVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 498 (694)
T ss_dssp CEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred ccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEE
Confidence 345678999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEE---ecCCCCEEEEEEcCCC--CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE
Q 022910 134 WDPSSGNLKCTL---EGPGGGVEWVSWHPRG--HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 134 ~d~~~~~~~~~~---~~~~~~i~~i~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 208 (290)
||+......... .+|...|.+++|+|++ ..|++++.|+.|++||+++++....+.+|...|++++|+|++++|++
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 998755433332 3577789999999986 58999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC----------
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT---------- 278 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---------- 278 (290)
++.||.|++||+++++.+..+. +...+.+++|+|++.+|++++ ++.|++||+.+++.+..+..+.
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLE----ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCB----CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------
T ss_pred EeCCCeEEEEECCCCceEEEec----CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccc
Confidence 9999999999999998876665 456799999999998887765 5669999999999988876432
Q ss_pred ---------CcEEEEEEecCC
Q 022910 279 ---------DSIECIGFSRSE 290 (290)
Q Consensus 279 ---------~~v~~i~~s~d~ 290 (290)
-.+++++|||+|
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp -------CCCCEEEEEECTTS
T ss_pred ccccCCceeEEeeeEEEcCCC
Confidence 137899999986
No 50
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.8e-37 Score=270.34 Aligned_cols=230 Identities=33% Similarity=0.579 Sum_probs=210.2
Q ss_pred CCCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
........+.+|...|.+++|+| ++.+|++++.|+.|++|++.. ..+..+.+|...|.+++|+|++++|++++.+|.|
T Consensus 291 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 368 (577)
T 2ymu_A 291 RNGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 368 (577)
T ss_dssp TTSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCcEEEEEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 34567788899999999999999 788999999999999999765 4456678899999999999999999999999999
Q ss_pred EEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC
Q 022910 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (290)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 211 (290)
++|+. +++.+..+..|...|++++|+|++++|++++.|+.|++|+. +++.+..+.+|...|++++|+|++++|++++.
T Consensus 369 ~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 369 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp EEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence 99995 57788889999999999999999999999999999999995 56778888999999999999999999999999
Q ss_pred CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
|+.|++||+ +++.+..+.. |...|++++|+|++++|++++.|+.|++|+. +++++..+.+|...|++++|+|+|
T Consensus 447 d~~v~~w~~-~~~~~~~~~~---~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 447 DKTVKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp TSEEEEEET-TSCEEEEEEC---CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS
T ss_pred CCEEEEEEC-CCCEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCC
Confidence 999999996 5666677776 7889999999999999999999999999995 789999999999999999999986
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.6e-38 Score=265.32 Aligned_cols=232 Identities=15% Similarity=0.208 Sum_probs=207.8
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe------eeeeeccccCCEEEEEECCC----C---CE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD------WASEIQGHKDSVSSLAFSMD----G---QL 121 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~i~~~~~~~~----~---~~ 121 (290)
.....+.+|.+.|++++|+| .+|++|+.||.|++|++.+++ ....+..|...|.+++|+|+ + ++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 45677889999999999998 689999999999999999887 77888899999999999999 9 99
Q ss_pred EEEEeCCCcEEEEcCCCCce-----EEEEecC-----CCCEEEEEEc----CCCCE-EEEeeCCCeEEEEECCc------
Q 022910 122 LASGGLDGLVQIWDPSSGNL-----KCTLEGP-----GGGVEWVSWH----PRGHI-VLAGSEDSTVWMWNADR------ 180 (290)
Q Consensus 122 l~~~~~dg~i~i~d~~~~~~-----~~~~~~~-----~~~i~~i~~~----~~~~~-l~~~~~dg~i~i~d~~~------ 180 (290)
|++++.||.|++|++.+++. ...+..| ...|.+++|+ |++++ |++++.+|.|++||+++
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999998887 8888888 4889999999 99999 99999999999999998
Q ss_pred ccEEE-----ee-------ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCc---ccCeEEEEEc
Q 022910 181 AAYLN-----MF-------SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH---TEGLTCLTIS 245 (290)
Q Consensus 181 ~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~v~~~~~~ 245 (290)
++.+. .+ ..|...|.+++|+|++ +|++++.||.|++||+++++.+..+.....| ...|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 66555 66 3488899999999999 9999999999999999999988888762224 7889999999
Q ss_pred CCCCEEEEEeCC---CcEEEEEcCCCcEEEEEcc-------------CCCcEEEEEEecCC
Q 022910 246 ADSTLALSGSKD---GSVHMVNITTGKVVSSLVS-------------HTDSIECIGFSRSE 290 (290)
Q Consensus 246 ~~~~~l~~~~~d---g~i~~wd~~~~~~~~~~~~-------------~~~~v~~i~~s~d~ 290 (290)
|++++|++++.| |.|++||+++++++..+.. |...|++++|+|++
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 999999999999 9999999999999999998 99999999999985
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-37 Score=259.82 Aligned_cols=225 Identities=22% Similarity=0.386 Sum_probs=197.5
Q ss_pred eccCCcCEEEEEECCCCCc-EEEEecCCCcEEEEEc----cCCe------eeeeecc----------ccCCEEEEEECCC
Q 022910 60 FSGHSDEVYSVACSPTDAT-LVATGGGDDKGFFWRI----NQGD------WASEIQG----------HKDSVSSLAFSMD 118 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~----~~~~------~~~~~~~----------~~~~i~~~~~~~~ 118 (290)
...|.++|++++|+| ++. +|++|+.||.|++|++ .+++ ....+.. |...|++++|+|+
T Consensus 41 ~~~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEEECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeeccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 344569999999999 566 9999999999999999 8777 3444443 6779999999999
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEE-------------
Q 022910 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN------------- 185 (290)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------------- 185 (290)
+++|++++.+|.|++|+ .+++.+..+..|...|.+++|+|++++|++++.+|.|++||+++++.+.
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 99999999999999999 6778888999999999999999999999999999999999998765433
Q ss_pred -------------------------------------------eeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCC
Q 022910 186 -------------------------------------------MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (290)
Q Consensus 186 -------------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 222 (290)
.+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 2335678899999999999999999999999999999
Q ss_pred CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++....+.. |...+.+++|+|++ +|++++.||.|++||+++++++..+..|...|++++|+|+|
T Consensus 279 ~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 279 GNSQNCFYG---HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp BSCSEEECC---CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTS
T ss_pred CccceEecC---CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCC
Confidence 988888876 77899999999999 99999999999999999999999999999999999999985
No 53
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=259.23 Aligned_cols=234 Identities=15% Similarity=0.275 Sum_probs=200.6
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecC---CCcEEEEEccCCeeeeee-ccccCCEEEEEECCC---CCEEEEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGG---DDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMD---GQLLASG 125 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~l~~~ 125 (290)
|......+.+|...|++++|+|++..++++|+. ||.|++|++.+++..... ..|...|.+++|+|+ +++|+++
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 444556678999999999999966678888876 999999999988765443 368999999999998 6999999
Q ss_pred eCCCcEEEEcCCCCc-eEEEEecCCCCEEEEEE------cCCCCEEEEeeCCCeEEEEECCccc-EEEeeecCCC----C
Q 022910 126 GLDGLVQIWDPSSGN-LKCTLEGPGGGVEWVSW------HPRGHIVLAGSEDSTVWMWNADRAA-YLNMFSGHGS----S 193 (290)
Q Consensus 126 ~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~i~~------~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~----~ 193 (290)
+.||.|++|++.+++ .+..+..|...|.++.| +|++++|++++.||.|++||++++. .+..+..+.. .
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999999988 88899999999999954 6789999999999999999999886 6777765544 8
Q ss_pred eEEEE----EcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC---CCCEEEEEeCCCcEEEEEcC
Q 022910 194 VTCGD----FTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA---DSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 194 i~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~wd~~ 266 (290)
+.+++ |+|++++|++++.||.|++||+++++...... +...|.+++|+| ++.+|++++.||.|++||++
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 89998 78899999999999999999999988755544 678999999999 99999999999999999998
Q ss_pred CCcEEEEE-----ccCCCcEEEEEEecCC
Q 022910 267 TGKVVSSL-----VSHTDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~~~~~~-----~~~~~~v~~i~~s~d~ 290 (290)
+++.+..+ .+|...|++++|+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 271 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQN 271 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTE
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCC
Confidence 77654444 4899999999999974
No 54
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.7e-38 Score=263.44 Aligned_cols=216 Identities=23% Similarity=0.426 Sum_probs=192.5
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeee-----ccccCCEEEEEECC-CCCEEEEEeC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-----QGHKDSVSSLAFSM-DGQLLASGGL 127 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~~~~i~~~~~~~-~~~~l~~~~~ 127 (290)
......+.+|.+.|.+++|.|.++..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 34566789999999999999977778999999999999999999888766 57899999999987 7889999999
Q ss_pred CCcEEEEcCC-CCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC-------CCeEEEEE
Q 022910 128 DGLVQIWDPS-SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-------SSVTCGDF 199 (290)
Q Consensus 128 dg~i~i~d~~-~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~ 199 (290)
|++|++||++ .++.+..+.+|.+.|.+++|+|++++|++|+.||+|++||+++++.+..+..+. ..|++++|
T Consensus 227 D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (380)
T 3iz6_a 227 DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAF 306 (380)
T ss_dssp TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEE
T ss_pred CCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEE
Confidence 9999999997 557788899999999999999999999999999999999999998887776533 24899999
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCC-CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 022910 200 TPDGKTICTGSDDATLRVWNPKSGENIHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (290)
Q Consensus 200 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 269 (290)
+|++++|++|+.||.|++||+.+++.+..+... ..|...|++++|+|++++|++|+.||+|++|++...+
T Consensus 307 s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 307 SISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999999999998887777432 3488899999999999999999999999999987654
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.9e-38 Score=265.60 Aligned_cols=233 Identities=19% Similarity=0.298 Sum_probs=200.5
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|.+.|++++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 445566689999999999999 7789999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEec---CCCCEEE---------------------EEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee-
Q 022910 134 WDPSSGNLKCTLEG---PGGGVEW---------------------VSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS- 188 (290)
Q Consensus 134 ~d~~~~~~~~~~~~---~~~~i~~---------------------i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 188 (290)
||+.+++.+..+.. +...+.+ ++|+|++++|++|+.+|.|++||+++++.+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 99999998888875 3334444 4557899999999999999999999988776664
Q ss_pred cCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEcCCCCee-eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 189 GHGSSVTCGDFTPDGK-TICTGSDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 189 ~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
.|...|.+++|+|++. +|++++.||.|++||+++++. +..+..+ +...++++.+ +++++|++++.||.|++|++.
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN--EGTPINNVYF-AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES--TTSCEEEEEE-ETTEEEEEETTTEEEEEEEEC
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc--CCCCceEEEe-CCCCEEEEecCCccEEEEecc
Confidence 4788999999999998 999999999999999998754 5666653 5677888865 478899999999999999987
Q ss_pred CC---------cEEEEEccCCCcEEEEEEecCC
Q 022910 267 TG---------KVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~---------~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.. .....+..|.+.|.+++|+|++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 365 DPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp CTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred CCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 63 2233466788999999999986
No 56
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1e-36 Score=290.81 Aligned_cols=236 Identities=25% Similarity=0.382 Sum_probs=218.3
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
......+.+|.+.|++++|+| ++.+|++|+.||+|++|++.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 605 ~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 605 NLSRLVVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp CCCSEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ccceEEEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 445667899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcC--CCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHP--RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 211 (290)
||+.+++.+..+..|...|.+++|+| ++.++++|+.||.|++||+++++.+..+.+|...|.+++|+|++++|++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 5568999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEcCCCCeeeEEEeCC----------------------------------------------------CCcccCe
Q 022910 212 DATLRVWNPKSGENIHVIRGH----------------------------------------------------PYHTEGL 239 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~----------------------------------------------------~~~~~~v 239 (290)
||.|++||+.+++....+... ..|...+
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999999877655443211 1356788
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 240 TCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 240 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.+++|+|+++++++++.+|.|++|++.+++.+..+.+|.+.|++++|+|+|
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999986
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-36 Score=256.40 Aligned_cols=229 Identities=20% Similarity=0.325 Sum_probs=204.5
Q ss_pred Cceeeecc-CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 55 DSTHIFSG-HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 55 ~~~~~~~~-h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.....+.. |...|++++|+| ++.+|++|+.||.|++|++.+++.+..+..|...|.+++| ++++|++++.||.|++
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 200 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHH 200 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred cEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEE
Confidence 33444444 899999999999 7889999999999999999999999999999999999999 5679999999999999
Q ss_pred EcCC-CCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCC-CEEEEEe-
Q 022910 134 WDPS-SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG-KTICTGS- 210 (290)
Q Consensus 134 ~d~~-~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~- 210 (290)
||+. ....+..+..|.+.|.+++|+|++++|++|+.||.|++||+++++.+..+..|...|.+++|+|++ .++++++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 9998 566778888999999999999999999999999999999999999999999999999999999966 5556654
Q ss_pred -CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCcEEE--EEccCCCcEEEEE
Q 022910 211 -DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG--SKDGSVHMVNITTGKVVS--SLVSHTDSIECIG 285 (290)
Q Consensus 211 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~i~ 285 (290)
.|+.|++||+++++.+..+. +...+.+++|+|++++|+++ +.||.|++|++.+++... .+.+|...|++++
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~ 356 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVD----AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEE
T ss_pred CCCCEEEEEECCCCCEEEEEe----CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEE
Confidence 69999999999999888886 56789999999999999994 489999999999976554 4678999999999
Q ss_pred EecCC
Q 022910 286 FSRSE 290 (290)
Q Consensus 286 ~s~d~ 290 (290)
|+|+|
T Consensus 357 ~s~dg 361 (401)
T 4aez_A 357 LSPDG 361 (401)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 99986
No 58
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-36 Score=246.27 Aligned_cols=227 Identities=22% Similarity=0.357 Sum_probs=205.2
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
+.+..+.+.+|.+.|++++| | ++.+|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.+|.|+
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 45778899999999999999 7 777899999999999999999998999999999999999999999999999999999
Q ss_pred EEcCCCC---ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcC-CCCEEEE
Q 022910 133 IWDPSSG---NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP-DGKTICT 208 (290)
Q Consensus 133 i~d~~~~---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 208 (290)
+|++... +.+..+..|...|.++.| ++++|++++.+|.|++|| .++.+..+..|...+.+++|+| ++++|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 9998654 566778889999999999 577999999999999999 6777888888999999999998 8999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.||.|++|| ..+....+... +...+.+++|+|++. |++++.||.|++||+++++++..+.+|.+.|++++|+|
T Consensus 161 ~~~d~~i~i~d--~~~~~~~~~~~--~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 161 ASADKTIKLWQ--NDKVIKTFSGI--HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp EETTSCEEEEE--TTEEEEEECSS--CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EECCCCEEEEe--cCceEEEEecc--CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec
Confidence 99999999999 34555555543 678899999999988 88999999999999999999999999999999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
+|
T Consensus 236 ~~ 237 (313)
T 3odt_A 236 NG 237 (313)
T ss_dssp TS
T ss_pred CC
Confidence 85
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-37 Score=259.60 Aligned_cols=223 Identities=19% Similarity=0.306 Sum_probs=199.0
Q ss_pred CCcCEEEEEECCCC---CcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECC-CCCEEEEEeCCCcEEEEcCCC
Q 022910 63 HSDEVYSVACSPTD---ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSS 138 (290)
Q Consensus 63 h~~~v~~~~~~~~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~ 138 (290)
|...|++++|+|+. +.+|++|+.||.|++|++.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 56789999999942 57999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CceEEEE---ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee---------------------------
Q 022910 139 GNLKCTL---EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS--------------------------- 188 (290)
Q Consensus 139 ~~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------------- 188 (290)
++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9998888 6789999999999999999999999999999999876544333
Q ss_pred -cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee--------------eEEEeCCCCcccCeEEEEEcCC--CCEE
Q 022910 189 -GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN--------------IHVIRGHPYHTEGLTCLTISAD--STLA 251 (290)
Q Consensus 189 -~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~--~~~l 251 (290)
.|...|.+++|+ +++|++++.||.|++||++++.. +..+.. |...|++++|+|+ +++|
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---SQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---SSCCSSCCCCEECTTSSEE
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccc---cCCcEEEEEEcCCCCCcEE
Confidence 388999999998 77999999999999999987643 445554 7788999999999 9999
Q ss_pred EEEeCCCcEEEEEcCCCc----EEEEEccC--CCcEEEEEEecCC
Q 022910 252 LSGSKDGSVHMVNITTGK----VVSSLVSH--TDSIECIGFSRSE 290 (290)
Q Consensus 252 ~~~~~dg~i~~wd~~~~~----~~~~~~~~--~~~v~~i~~s~d~ 290 (290)
++|+.||.|++||+.+++ .+..+..| ...|++++|+|+|
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 347 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDS 347 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTS
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCC
Confidence 999999999999999875 55678887 7899999999985
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=253.43 Aligned_cols=236 Identities=16% Similarity=0.323 Sum_probs=205.6
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec-------------cccCCEEEEEECC-CC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-------------GHKDSVSSLAFSM-DG 119 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------~~~~~i~~~~~~~-~~ 119 (290)
......+.+|.+.|++++|+|.++.+|++|+.||.|++|++.++.....+. +|...|.+++|+| ++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 456778899999999999999667889999999999999999876555443 5999999999999 77
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCC---CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEE
Q 022910 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRG---HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC 196 (290)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 196 (290)
.+|++++.||.|++|++.+++....+. +...+.++.|+|.+ .++++++.+|.|++||+++++.+..+..|...|.+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 799999999999999999999888877 66779999999854 49999999999999999999999999999999999
Q ss_pred EEEcCCCC-EEEEEeCCCeEEEEcCCCCe-eeEEEeCC------------CCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 022910 197 GDFTPDGK-TICTGSDDATLRVWNPKSGE-NIHVIRGH------------PYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 197 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
++|+|++. +|++++.||.|++||++++. .+..+... ..|...|.+++|+|++++|++++.||.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 99999988 58899999999999998775 33333211 237788999999999999999999999999
Q ss_pred EEcCCC-----------------------------------------------cEEEEEccCCCcEEEEEEecCC
Q 022910 263 VNITTG-----------------------------------------------KVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 263 wd~~~~-----------------------------------------------~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
||+.++ +++..+.+|.+.|++++|+|++
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 998653 5677888899999999999985
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.6e-37 Score=248.28 Aligned_cols=212 Identities=19% Similarity=0.291 Sum_probs=182.4
Q ss_pred CceeeeccCCcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCC--CCEEEEEeCCC
Q 022910 55 DSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLDG 129 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg 129 (290)
..+..+.+|.++|++++|+|. .+.+|++|+.|++|++|++.+++ .+..+..|...|.+++|+|+ +.+|++++.|+
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 567899999999999999873 47899999999999999998874 45667789999999999997 88999999999
Q ss_pred cEEEEcCCCCc--eEEEEecCCCCEEEEEEcCC-------------CCEEEEeeCCCeEEEEECCccc----EEEeeecC
Q 022910 130 LVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPR-------------GHIVLAGSEDSTVWMWNADRAA----YLNMFSGH 190 (290)
Q Consensus 130 ~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~ 190 (290)
.|++|++.++. ....+..|...|.+++|+|+ +++|++|+.|+.|++||+++++ ....+.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 24567789999999999996 5799999999999999998765 56778899
Q ss_pred CCCeEEEEEcCCC---CEEEEEeCCCeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 191 GSSVTCGDFTPDG---KTICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 191 ~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
...|.+++|+|++ .+|++++.|++|++||+++... .........+...|.+++|+|++++|++++.||.|++|+.
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 9999999999984 8999999999999999986431 1222212236788999999999999999999999999998
Q ss_pred C
Q 022910 266 T 266 (290)
Q Consensus 266 ~ 266 (290)
.
T Consensus 284 ~ 284 (297)
T 2pm7_B 284 N 284 (297)
T ss_dssp C
T ss_pred C
Confidence 6
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=264.02 Aligned_cols=225 Identities=17% Similarity=0.310 Sum_probs=202.6
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC----CeeeeeeccccCCEEEEEECCC-CCEEEEEeCCCcEEEEcC
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMD-GQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~ 136 (290)
.|...|++++|+| ++.+|++|+.||.|++|++.. .+.+..+..|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 65 ~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 65 QVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred ecCCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 5899999999999 778899999999999999987 4577888899999999999998 889999999999999999
Q ss_pred CCCc------eEEE---EecCCCCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeecC------CCCeEEEEEc
Q 022910 137 SSGN------LKCT---LEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGH------GSSVTCGDFT 200 (290)
Q Consensus 137 ~~~~------~~~~---~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~ 200 (290)
.+++ .... +..|...|.+++|+|+ +.+|++++.+|.|++||+++++.+..+..+ ...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 9886 3322 3568889999999998 789999999999999999999988888776 7899999999
Q ss_pred CCC-CEEEEEeCCC---eEEEEcCCCC-eeeEEEe-CCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEE
Q 022910 201 PDG-KTICTGSDDA---TLRVWNPKSG-ENIHVIR-GHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVVSS 273 (290)
Q Consensus 201 ~~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~ 273 (290)
|++ .+|++++.++ .|++||++++ .....+. . |...|++++|+| ++++|++++.||.|++||+.+++++..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG---HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ 300 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC---CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC---ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee
Confidence 987 6899999998 9999999986 4444444 3 788999999999 999999999999999999999999999
Q ss_pred EccCCCcEEEEEEecCC
Q 022910 274 LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 274 ~~~~~~~v~~i~~s~d~ 290 (290)
+..|...|++++|+|++
T Consensus 301 ~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPEA 317 (416)
T ss_dssp EECSSSCCCCEEECTTC
T ss_pred ecCCCCceEEEEECCCC
Confidence 99999999999999985
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-38 Score=271.90 Aligned_cols=205 Identities=13% Similarity=0.120 Sum_probs=178.9
Q ss_pred eeeccCCcCEEEEEECCC-----CCcEEEEecCCCcEEEEEccCCee-----------eeeeccccCCEEEEEECCCCCE
Q 022910 58 HIFSGHSDEVYSVACSPT-----DATLVATGGGDDKGFFWRINQGDW-----------ASEIQGHKDSVSSLAFSMDGQL 121 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~ 121 (290)
..+.+|.+.|.+++|+|. ++.+||+++.||+|++|++..+.. ...+.+|...|++++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 456788999999999994 257999999999999999986532 2356789999999999986 48
Q ss_pred EEEEeCCCcEEEEcCCCC-ceEEEEecCCCCEEEE--EEcCCC-CEEEEeeCCCeEEEEECCcccEEEeeecCCC--CeE
Q 022910 122 LASGGLDGLVQIWDPSSG-NLKCTLEGPGGGVEWV--SWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGS--SVT 195 (290)
Q Consensus 122 l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~i--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~ 195 (290)
|++|+.||+|++||+.++ .+...+..|...|.++ +|+|++ .+|++|+.|++|++||+++++++..+.+|.. .|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 999999999999999976 4456788999999999 578887 8999999999999999999887766666543 588
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 196 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
+++|+|++..|++++.|++|++||++++.++..+.+ |...|++++|+|++++|++|+.||+|++|++.
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS---RETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE---CSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec---CCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 999999999999999999999999999988777776 88999999999999999999999999999853
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-37 Score=258.98 Aligned_cols=233 Identities=17% Similarity=0.272 Sum_probs=214.5
Q ss_pred CCCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCC---------------EEEEEEC
Q 022910 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------------VSSLAFS 116 (290)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------------i~~~~~~ 116 (290)
.....+..+.+|...|.+++|+| ++.+|++++.+|.|++|++.+++.+..+..+... +.++.|+
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (425)
T 1r5m_A 137 KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWV 215 (425)
T ss_dssp TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEE
T ss_pred CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEc
Confidence 45677888999999999999999 7788999999999999999999998888877776 8999999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEE
Q 022910 117 MDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC 196 (290)
Q Consensus 117 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 196 (290)
|++ .+++++.+|.|++|++.+++.+..+..|...|.+++|+|++++|++++.+|.|++||+++++.+..+..|...|.+
T Consensus 216 ~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 216 DDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp ETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEE
T ss_pred CCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEE
Confidence 875 5888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-------
Q 022910 197 GDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK------- 269 (290)
Q Consensus 197 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~------- 269 (290)
++|+|++ +|++++.||.|++||+++++.+..+.. |...+.+++|+|++++|++++.||.|++|++.+++
T Consensus 295 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 370 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV---DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLY 370 (425)
T ss_dssp EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC---TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------
T ss_pred EEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc---CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeee
Confidence 9999999 999999999999999999998888876 67899999999999999999999999999999988
Q ss_pred -------------EEEEEccCCC--cEEEEEEecCC
Q 022910 270 -------------VVSSLVSHTD--SIECIGFSRSE 290 (290)
Q Consensus 270 -------------~~~~~~~~~~--~v~~i~~s~d~ 290 (290)
++..+..|.. .|++++|+|++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 371 GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp --------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred cccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 8999999976 99999999986
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.5e-37 Score=260.71 Aligned_cols=220 Identities=20% Similarity=0.235 Sum_probs=194.1
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (290)
.+....|+| ++.+|++|+.||.|++|++.+++....+..|...|++++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus 99 ~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 99 YTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred ceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 344456787 7889999999999999999999988888899999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeec---CCCCeEE---------------------EEEcC
Q 022910 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG---HGSSVTC---------------------GDFTP 201 (290)
Q Consensus 146 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~---------------------~~~~~ 201 (290)
..|...|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+ ++|+|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 99999999999999999999999999999999999998888764 3334444 45578
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCc-EEEEEcc-CC
Q 022910 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGK-VVSSLVS-HT 278 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~-~~~~~~~-~~ 278 (290)
++++|++++.||.|++||+++++.+..+... |...|++++|+|++. +|++|+.||.|++||+++++ ++..+.. |.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSK--FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCT--TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccc--cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC
Confidence 8999999999999999999999887776542 678999999999998 99999999999999999875 4777776 67
Q ss_pred CcEEEEEEec
Q 022910 279 DSIECIGFSR 288 (290)
Q Consensus 279 ~~v~~i~~s~ 288 (290)
..|+++.|++
T Consensus 336 ~~v~~~~~~~ 345 (420)
T 3vl1_A 336 TPINNVYFAA 345 (420)
T ss_dssp SCEEEEEEET
T ss_pred CCceEEEeCC
Confidence 7888886653
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-36 Score=278.44 Aligned_cols=233 Identities=21% Similarity=0.315 Sum_probs=217.6
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
...+..+.+|.++|++++|+| ++.+|++|+.||.|++|++.+++.+..+.+|...|++++|+|++++|++++.||.|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred CceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 557788999999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCC-ceEEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEeeecCC-CCeEEEEEcC--CCCEEEE
Q 022910 134 WDPSSG-NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-SSVTCGDFTP--DGKTICT 208 (290)
Q Consensus 134 ~d~~~~-~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~ 208 (290)
|++.++ .....+..|...|.+++|+| ++..|++++.+|.|++||++++.....+..+. ..+.+++|+| ++.+|++
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 203 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE
Confidence 999987 66778888999999999999 88999999999999999999887777766554 8899999999 9999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.+|.|++||+.+++.+..+.. |...|++++|+|++++|++++.||.|++||+.+++.+..+..|...|++++|+|
T Consensus 204 ~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp ECTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EeCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 99999999999999998888876 778999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
+|
T Consensus 281 ~~ 282 (814)
T 3mkq_A 281 TG 282 (814)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 67
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-37 Score=265.01 Aligned_cols=235 Identities=12% Similarity=0.171 Sum_probs=196.5
Q ss_pred CCCCCceeee-ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC---Ce---eeeeeccccCCEEEEEECCCCCEEE
Q 022910 51 EQPDDSTHIF-SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ---GD---WASEIQGHKDSVSSLAFSMDGQLLA 123 (290)
Q Consensus 51 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~---~~---~~~~~~~~~~~i~~~~~~~~~~~l~ 123 (290)
......+..+ .+|.+.|++++|+|.++.+|++|+.||+|++|++.+ +. ....+ .|...|.+++|+|++++|+
T Consensus 49 ~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 49 NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp GCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEE
T ss_pred cccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEE
Confidence 4567788888 999999999999995667899999999999999977 43 22333 4899999999999999999
Q ss_pred EEeCCCcEEEEcCC---CCceEEEEec------------CCCCEEEEE--EcCCCCEEEEeeCCCeEEEEECCcccEEEe
Q 022910 124 SGGLDGLVQIWDPS---SGNLKCTLEG------------PGGGVEWVS--WHPRGHIVLAGSEDSTVWMWNADRAAYLNM 186 (290)
Q Consensus 124 ~~~~dg~i~i~d~~---~~~~~~~~~~------------~~~~i~~i~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 186 (290)
+++.||.|++|++. +++....+.. +...+.++. +++++.+|++++.+|.|++||+++++.+..
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 99999999999994 5555443332 344566666 557899999999999999999999999999
Q ss_pred eec--CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC----CCCEEEEEeCCCcE
Q 022910 187 FSG--HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA----DSTLALSGSKDGSV 260 (290)
Q Consensus 187 ~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i 260 (290)
+.. |...|++++|+|++++|++|+.||.|++||+++++.+..+... +...|++++|+| ++.+|++|+.||.|
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG--DHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT--TCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC--CCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 988 8899999999999999999999999999999999988877522 567899996664 67899999999999
Q ss_pred EEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 261 HMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 261 ~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++||+++++++..+.+|...+..+.|+|
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 313 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLP 313 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecc
Confidence 9999999999999887654444444433
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.4e-37 Score=253.44 Aligned_cols=230 Identities=15% Similarity=0.250 Sum_probs=199.3
Q ss_pred eccCCcCEEEEEECCCC--CcEEEEecCCCcEEEEEccCCe-eeeeeccccCCEEEEEE------CCCCCEEEEEeCCCc
Q 022910 60 FSGHSDEVYSVACSPTD--ATLVATGGGDDKGFFWRINQGD-WASEIQGHKDSVSSLAF------SMDGQLLASGGLDGL 130 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~ 130 (290)
..+|..+|.+++|+|+. +.+|++|+.||.|++|++.+++ .+..+.+|...|.++.| +|++++|++++.||.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 34799999999999953 6899999999999999999987 88889999999999955 688999999999999
Q ss_pred EEEEcCCCCc-eEEEEecCCC----CEEEEE----EcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcC
Q 022910 131 VQIWDPSSGN-LKCTLEGPGG----GVEWVS----WHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP 201 (290)
Q Consensus 131 i~i~d~~~~~-~~~~~~~~~~----~i~~i~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 201 (290)
|++||+.+++ .+..+..+.+ .+.+++ |+|++++|++++.+|.|++||+++++.... ..|...|.+++|+|
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDR 219 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESC
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCC
Confidence 9999999887 6777766554 799998 788999999999999999999999887544 55889999999999
Q ss_pred ---CCCEEEEEeCCCeEEEEcCCCCeeeEEEe--CCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC-------
Q 022910 202 ---DGKTICTGSDDATLRVWNPKSGENIHVIR--GHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTG------- 268 (290)
Q Consensus 202 ---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~------- 268 (290)
++.+|++++.||.|++||+++++....+. ....|...|++++|+|+++ +|++|+.||.|++||++++
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 89999999999999999998876654443 1112788999999999998 8999999999999999754
Q ss_pred ------------cEEEEEccCCCcEEEEEEecCC
Q 022910 269 ------------KVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 269 ------------~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+++..+.+|..+|++++|+|+|
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCC
Confidence 4788889999999999999986
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-37 Score=263.65 Aligned_cols=213 Identities=22% Similarity=0.388 Sum_probs=192.6
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe------eeee---eccccCCEEEEEECCC-CCEEEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD------WASE---IQGHKDSVSSLAFSMD-GQLLAS 124 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~---~~~~~~~i~~~~~~~~-~~~l~~ 124 (290)
..+..+.+|...|++++|+|+++.+|++++.||.|++|++.+++ .... +..|...|.+++|+|+ +.+|++
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEE
Confidence 47888999999999999999558899999999999999999876 3333 3678999999999998 789999
Q ss_pred EeCCCcEEEEcCCCCceEEEEecC------CCCEEEEEEcCCC-CEEEEeeCCC---eEEEEECCcc-cEEEeee-cCCC
Q 022910 125 GGLDGLVQIWDPSSGNLKCTLEGP------GGGVEWVSWHPRG-HIVLAGSEDS---TVWMWNADRA-AYLNMFS-GHGS 192 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~i~~~~~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~ 192 (290)
++.+|.|++||+.+++.+..+..+ ...+.+++|+|++ .+|++++.++ .|++||++++ .++..+. +|..
T Consensus 184 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~ 263 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK 263 (416)
T ss_dssp ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS
T ss_pred EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC
Confidence 999999999999999998888876 7889999999997 6999999998 9999999986 6677777 8999
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcE
Q 022910 193 SVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 193 ~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
.|.+++|+| ++++|++++.||.|++||+++++.+..+.. |...|++++|+|++ .+|++++.||.|++|++.+++.
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 999999999 999999999999999999999999888886 77889999999998 8999999999999999987653
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-35 Score=255.17 Aligned_cols=226 Identities=23% Similarity=0.401 Sum_probs=205.7
Q ss_pred CCceeeeccCCcCE-EEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 54 DDSTHIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 54 ~~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
......+.+|...| .++.+.+ .+|++|+.||.|++|++.+++.+..+.+|...|.+++|+|++ +|++|+.||+|+
T Consensus 111 ~~~~~~l~~h~~~v~~~~~~~~---~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 111 VPQRTTLRGHMTSVITCLQFED---NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp CCEEEEEECCSSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred CcceEEEcCCCCCcEEEEEECC---CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 34567899999885 6777753 589999999999999999999999999999999999999888 999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEc--CCCCEEEEeeCCCeEEEEECCcccE-----------------------EEee
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWH--PRGHIVLAGSEDSTVWMWNADRAAY-----------------------LNMF 187 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~--~~~~~l~~~~~dg~i~i~d~~~~~~-----------------------~~~~ 187 (290)
+||+.+++.+..+.+|...|.+++|+ +++++|++|+.||.|++||+++... +..+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 5778999999999999999987642 4566
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 188 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
.+|...+.++ ++++++|++++.||.|++||+++++.+..+.. |...|.+++|+|++++|++|+.||.|++||+.+
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---HTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 7788888876 56789999999999999999999999888876 788999999999999999999999999999999
Q ss_pred CcEEEEEccCCCcEEEEEEec
Q 022910 268 GKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 268 ~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++++..+.+|...|++++|++
T Consensus 342 ~~~~~~~~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 342 GELMYTLQGHTALVGLLRLSD 362 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECS
T ss_pred CcEEEEEeCCCCcEEEEEEcC
Confidence 999999999999999999985
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-37 Score=280.84 Aligned_cols=230 Identities=19% Similarity=0.294 Sum_probs=198.8
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc--CCeeeeeeccccCCEEEEEECCC--CCEEEEEeCCCcEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLVQ 132 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~ 132 (290)
+..+.+|.++|++++|+| ++.+|++|+.||.|++|++. +++....+.+|..+|++++|+|+ +++|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 467899999999999999 77789999999999999998 55677788899999999999988 89999999999999
Q ss_pred EEcCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEeeCCCeEEEEECCccc--EEEeeecCCCCeEEEEEcC-----
Q 022910 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTP----- 201 (290)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~----- 201 (290)
+|++.+++ .+..+..|...|++++|+|+ ++++++|+.||.|++||++++. ....+..|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999987 66777889999999999999 9999999999999999998873 4456678999999999999
Q ss_pred --------CCCEEEEEeCCCeEEEEcCCCCe----eeEEEeCCCCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEEcC
Q 022910 202 --------DGKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 202 --------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~wd~~ 266 (290)
++.+|++|+.||.|++||++++. ....+.. |...|++++|+|+ +.+|++|+.||.|++||+.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~---h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC---CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 58999999999999999998773 3344444 7889999999999 8999999999999999998
Q ss_pred CCc-----EEEEEccCCCcEEEEEEecCC
Q 022910 267 TGK-----VVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~-----~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+++ .+.....|...|++++|+|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg 266 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSG 266 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTT
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCC
Confidence 864 334445688999999999986
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.9e-36 Score=251.20 Aligned_cols=207 Identities=19% Similarity=0.266 Sum_probs=187.1
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.+..+.+|...|.+++|+| ++.+|++++.||.|++|++.+++.... +..|...|.+++|+|++++|++++.+|.|++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 122 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 122 (372)
T ss_dssp EEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred eeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEE
Confidence 7888999999999999999 788999999999999999998875444 4678999999999999999999999999999
Q ss_pred EcCCCCce---EEEE-ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECC------------------cccEEEeeecCC
Q 022910 134 WDPSSGNL---KCTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD------------------RAAYLNMFSGHG 191 (290)
Q Consensus 134 ~d~~~~~~---~~~~-~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~ 191 (290)
|++..+.. ...+ ..|...|.+++|+|++++|++++.+|.|++||++ .++.+..+..|.
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 99988773 2333 5578899999999999999999999999999954 678888888999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 192 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
..|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+++|+|++.+|++| .|+.|++|++.+
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC---SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc---CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999999999999999999998888886 67889999999999988887 899999999987
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.3e-36 Score=251.89 Aligned_cols=225 Identities=17% Similarity=0.226 Sum_probs=192.8
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc---ccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG---HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (290)
.+|...|.+++|+|.++.+|++++.|+.|++|++.. .....+.. |...|.+++|+|++++|++++.|+.|++||+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~- 192 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL- 192 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-
Confidence 479999999999997778999999999999999986 44444443 4488999999999999999999999999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCc----ccEEEeeecCCCCeEEEEEcC-CCCEEEEEeC
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGDFTP-DGKTICTGSD 211 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 211 (290)
+++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+ .|...|.+++|+| ++.+|++++.
T Consensus 193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 5778889999999999999999999 999999999999999998 5666666 5899999999999 9999999999
Q ss_pred CCeEEEEcCCCCeeeEEEeCCCC----cc----------cCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc-
Q 022910 212 DATLRVWNPKSGENIHVIRGHPY----HT----------EGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS- 276 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~----~~----------~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~- 276 (290)
|+.|++||+++++....+..+.. +. ..+..++|+|++++ +|+.||.|++||+.+++++..+.+
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC
Confidence 99999999998887666654321 11 33445667777766 777899999999999999999987
Q ss_pred -CCCcEEEEEEecCC
Q 022910 277 -HTDSIECIGFSRSE 290 (290)
Q Consensus 277 -~~~~v~~i~~s~d~ 290 (290)
|...+..++|+|+|
T Consensus 350 ~~~~~~~~~~~s~~g 364 (383)
T 3ei3_B 350 NAAGIISLNKFSPTG 364 (383)
T ss_dssp TBCSCCCEEEECTTS
T ss_pred CCCceEEEEEEecCc
Confidence 45778888999986
No 74
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-36 Score=257.25 Aligned_cols=231 Identities=9% Similarity=0.055 Sum_probs=199.7
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc--CCeeeeeec--cccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
.....+|.+.|++++|+|++..++++|+.||.|++|++. +++.+..+. .|...|.+++|+|++++|++++.+|.|+
T Consensus 95 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 95 GLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp -----CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 344568899999999999444446999999999999999 788777776 4668999999999999999999999999
Q ss_pred EEcCCCCceEE----EEecCCCCEEEEEEcCC---CCEEEEeeCCCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCCC
Q 022910 133 IWDPSSGNLKC----TLEGPGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 133 i~d~~~~~~~~----~~~~~~~~i~~i~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~ 204 (290)
+|++.+++... .+.+|...|++++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|...|.+++|+ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 99998876543 67789999999999999 99999999999999999999988777 56899999999999 999
Q ss_pred EEEEEeCCCeEEEEcCCCCeeeEEEeCCC----------------------CcccCeEEEEEcCCCCEEEEEe-CCCcEE
Q 022910 205 TICTGSDDATLRVWNPKSGENIHVIRGHP----------------------YHTEGLTCLTISADSTLALSGS-KDGSVH 261 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~ 261 (290)
+|++++.|+.|++||+++++.+..+.... .....+..++|+|++++|++++ .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 99999999999999999999888776321 1345789999999999999998 899999
Q ss_pred EEEc--CCC---cEEEEEccCCCcEEEEEEecC
Q 022910 262 MVNI--TTG---KVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 262 ~wd~--~~~---~~~~~~~~~~~~v~~i~~s~d 289 (290)
+|++ .++ +.+..+..| +.|++++|+|+
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~ 365 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP-YNVISLSAHND 365 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS-SCEEEEEEETT
T ss_pred EEEeccCCCCceeeccEeccC-CceEEEEecCC
Confidence 9999 565 778888887 89999999985
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-37 Score=267.29 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=187.0
Q ss_pred CCcCEEEEEECCCC-C-------cEEEE-------------------ecCCCcEEEEEccCCeee----eeeccccCCEE
Q 022910 63 HSDEVYSVACSPTD-A-------TLVAT-------------------GGGDDKGFFWRINQGDWA----SEIQGHKDSVS 111 (290)
Q Consensus 63 h~~~v~~~~~~~~~-~-------~~l~~-------------------~~~dg~i~iw~~~~~~~~----~~~~~~~~~i~ 111 (290)
+.+.|.+|+|+|.. + .+||+ ++.|++|+||++.+++.. ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 67899999999943 1 56665 457889999999877642 34566788999
Q ss_pred EEEECCC------CCEEEEEeCCCcEEEEcCCCCce-----------EEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEE
Q 022910 112 SLAFSMD------GQLLASGGLDGLVQIWDPSSGNL-----------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVW 174 (290)
Q Consensus 112 ~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~ 174 (290)
+++|+|+ +.+||+++.||+|+||++.++.. ...+.+|...|++++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999987642 2467788899999999985 4899999999999
Q ss_pred EEECCcc-cEEEeeecCCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCE
Q 022910 175 MWNADRA-AYLNMFSGHGSSVTCG--DFTPDG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTL 250 (290)
Q Consensus 175 i~d~~~~-~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 250 (290)
+||++++ .+...+.+|...|.++ +|+|++ .+|++++.|++|++||+++++....+.++. ....|.+++|+|+++.
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCe
Confidence 9999976 4456688899999999 567887 899999999999999999888766665421 1235789999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 251 ALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 251 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
|++++.|++|++||++++.++.++.+|.+.|++|+|||+|
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH 409 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC
T ss_pred EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC
Confidence 9999999999999999999989999999999999999986
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-36 Score=275.52 Aligned_cols=226 Identities=13% Similarity=0.110 Sum_probs=197.0
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (290)
....+|.+.|++++|+| ++.+||+|+.||+|+||+....+....+. |..+|.+++|+| +++|++++.|++|++||+.
T Consensus 11 ~~~~gh~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEECSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccccCCCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 34458999999999999 78899999999999999998877666554 788999999999 8899999999999999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEE-----------EeeecCCCCeEEEEEcCC-CCE
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL-----------NMFSGHGSSVTCGDFTPD-GKT 205 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~-~~~ 205 (290)
+++.+..+. +...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|..+|.+++|+|+ +..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999988886 6678999999999999999999999999999988753 234568899999999995 578
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeCC---------------CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRGH---------------PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
|++|+.||.| +||+++++.+..+..+ ..|...|++++|+|+|++|++|+.||.|++||++++++
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9999999988887653 22357799999999999999999999999999999998
Q ss_pred EEE--Ec---c-------------CCCcEEEEEEec
Q 022910 271 VSS--LV---S-------------HTDSIECIGFSR 288 (290)
Q Consensus 271 ~~~--~~---~-------------~~~~v~~i~~s~ 288 (290)
+.. +. . |..+|++++|++
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 764 21 1 345899999964
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-36 Score=253.68 Aligned_cols=230 Identities=20% Similarity=0.334 Sum_probs=199.6
Q ss_pred eeeccCCcCEEEEEECCC---CCcEEEEecCCCcEEEEEccCCeeeeeecc-----ccCCEEEEEECCC----CCEEEEE
Q 022910 58 HIFSGHSDEVYSVACSPT---DATLVATGGGDDKGFFWRINQGDWASEIQG-----HKDSVSSLAFSMD----GQLLASG 125 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~i~~~~~~~~----~~~l~~~ 125 (290)
....+|.++|++++|+|. +..++++++.++.|++|++.+++.+..+.. |...|.+++|+|+ +++|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345589999999999983 345566666677999999998877766654 4577999999998 6699999
Q ss_pred eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEee---ecCCCCeEEEEEcC
Q 022910 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTP 201 (290)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~ 201 (290)
+.||.|++|++.+++.+..+..|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999999999999999999999999999999 8999999999999999999999988887 67999999999999
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCeeeEEEe-------------------------CCCCcccCeEEEEEcCCCCEEEEEeC
Q 022910 202 DGKTICTGSDDATLRVWNPKSGENIHVIR-------------------------GHPYHTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
++++|++++.||.|++||+++++....+. ....|...|.+++|+ +.+|++++.
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 99999999999999999998765432221 111277889999998 779999999
Q ss_pred CCcEEEEEcCCCc--------------EEEEEccCCCcEEEEEEecC
Q 022910 257 DGSVHMVNITTGK--------------VVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 257 dg~i~~wd~~~~~--------------~~~~~~~~~~~v~~i~~s~d 289 (290)
||.|++||+.+++ .+..+..|...|++++|+|+
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC
Confidence 9999999998874 48888999999999999998
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-35 Score=239.40 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=203.5
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC---eeeeeeccccCCEEEEEECCCCCEEEEEeCCCc
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG---DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (290)
......+..|...|.+++|+| ++.+|++|+.||.|++|++... +....+..|...|.++.| ++++|++++.+|.
T Consensus 49 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~ 125 (313)
T 3odt_A 49 QWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT 125 (313)
T ss_dssp SEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred CEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC
Confidence 456778889999999999999 7889999999999999998764 556778889999999999 6789999999999
Q ss_pred EEEEcCCCCceEEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEeeec-CCCCeEEEEEcCCCCEEEE
Q 022910 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSG-HGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~ 208 (290)
|++|| .++....+..|...+.+++|+| +++++++++.+|.|++|| ..+....+.. +...+.+++|+|++. +++
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 200 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FIS 200 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEE
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEE
Confidence 99999 6778888889999999999998 899999999999999999 4455666666 889999999999988 999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.+|.|++||+++++.+..+.. |...|++++|+|++ .|++++.||.|++||+.+++++..+..|...|++++|+|
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMS 276 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECT
T ss_pred ccCCCeEEEEECCchhhhhhhhc---CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEcc
Confidence 99999999999999999888876 78899999999998 688999999999999999999999999999999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
++
T Consensus 277 ~~ 278 (313)
T 3odt_A 277 NG 278 (313)
T ss_dssp TS
T ss_pred CC
Confidence 85
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=259.98 Aligned_cols=225 Identities=14% Similarity=0.208 Sum_probs=190.2
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe-----------eeeeecccc------------CCEEEEEECCCC
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------WASEIQGHK------------DSVSSLAFSMDG 119 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~~ 119 (290)
|.+.|++++|+| ++.+||+|+.||.|+||++.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 678999999999 88899999999999999998876 477788898 889999999998
Q ss_pred --CEEEEEeCCCcEEEEcCCCCceE---------------------------------------EE-EecCCCCEEEEEE
Q 022910 120 --QLLASGGLDGLVQIWDPSSGNLK---------------------------------------CT-LEGPGGGVEWVSW 157 (290)
Q Consensus 120 --~~l~~~~~dg~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~i~~i~~ 157 (290)
.+|++++.|+.|++|++.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 12 3568899999999
Q ss_pred cCCCCEEEEeeCCCeEEEEECCc-ccEEE-------eeecCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEcCCCCee---
Q 022910 158 HPRGHIVLAGSEDSTVWMWNADR-AAYLN-------MFSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKSGEN--- 225 (290)
Q Consensus 158 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~--- 225 (290)
+|++++|++| .|+.|++||+++ .+.+. .+..|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 799999999994 44444 356789999999999998 9999999999999999999886
Q ss_pred -eEEEeCCCC---------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CcEEEEEccCCCc--------------
Q 022910 226 -IHVIRGHPY---------HTEGLTCLTISADSTLALSGSKDGSVHMVNITT-GKVVSSLVSHTDS-------------- 280 (290)
Q Consensus 226 -~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~-------------- 280 (290)
...+..+.. |...|.+++|+|++++|++++. +.|++||+++ ++++..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 677765310 1138999999999999999999 9999999997 8889999888542
Q ss_pred -EEEEEEecCC
Q 022910 281 -IECIGFSRSE 290 (290)
Q Consensus 281 -v~~i~~s~d~ 290 (290)
+..++|+|+|
T Consensus 344 ~~~~~~~s~~~ 354 (447)
T 3dw8_B 344 DKFECCWNGSD 354 (447)
T ss_dssp CCCCEEECTTS
T ss_pred cceEEEECCCC
Confidence 3348999985
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-34 Score=246.45 Aligned_cols=224 Identities=22% Similarity=0.368 Sum_probs=199.9
Q ss_pred eccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 022910 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (290)
+.+|...|++|+|+| ++.+|++|+.||.|+||++.+++.+..+.+|...+.++.+ ++.+|++|+.|+.+++|+....
T Consensus 143 ~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 143 MEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred ecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeeccc
Confidence 346888999999999 7889999999999999999999999999999999999888 5679999999999999998865
Q ss_pred -ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc----EEEeeecCCCCeEEEEEcCCC-CEEEEE--eC
Q 022910 140 -NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA----YLNMFSGHGSSVTCGDFTPDG-KTICTG--SD 211 (290)
Q Consensus 140 -~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~-~~l~~~--~~ 211 (290)
..+..+.+|...+..+.|+|++.++++++.|+.+++|++.+++ .+.....|...|.+++|+|.+ .+++++ +.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 4567788999999999999999999999999999999998764 345667789999999999954 555553 57
Q ss_pred CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS--KDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
|+.|++||+.+++....+. ....+.++.|+|+++.|++++ .|+.|++||+.+++++.++.+|.+.|++++|+||
T Consensus 300 D~~I~iwd~~t~~~~~~~~----~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd 375 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 375 (420)
T ss_dssp TCEEEEEETTTTEEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCEEEEEeCCccccceeec----cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 9999999999999988887 456799999999999888765 6899999999999999999999999999999998
Q ss_pred C
Q 022910 290 E 290 (290)
Q Consensus 290 ~ 290 (290)
|
T Consensus 376 g 376 (420)
T 4gga_A 376 G 376 (420)
T ss_dssp S
T ss_pred C
Confidence 6
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.8e-37 Score=255.98 Aligned_cols=206 Identities=16% Similarity=0.263 Sum_probs=173.8
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe---eeeeeccccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
..+..+.+|...|.+++|+| ++.+|++++.|+.|++|++.+++ ....+..|...|.+++|+|++++|++++.|+.|
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI 124 (377)
T ss_dssp EECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE
T ss_pred EEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE
Confidence 56778899999999999999 67889999999999999999877 666777899999999999999999999999999
Q ss_pred EEEcCCCCc---eEEEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECC------------------cccEEEeeec
Q 022910 132 QIWDPSSGN---LKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD------------------RAAYLNMFSG 189 (290)
Q Consensus 132 ~i~d~~~~~---~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~ 189 (290)
++|++.+++ ....+.. |...|.+++|+|++++|++++.||.|++||++ .++++..+ .
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 999999887 4677777 89999999999999999999999999999985 35566667 8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee----eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN----IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 190 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
|...|.+++|+|++++|++++.||.|++||+++++. +..+.. |...|.+++|+|++++|++|+.++.+ +|+.
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL---SQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC---SSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC---CCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 999999999999999999999999999999999887 555555 78899999999999999998766655 6665
Q ss_pred C
Q 022910 266 T 266 (290)
Q Consensus 266 ~ 266 (290)
.
T Consensus 280 ~ 280 (377)
T 3dwl_C 280 N 280 (377)
T ss_dssp C
T ss_pred C
Confidence 4
No 82
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.3e-36 Score=248.23 Aligned_cols=225 Identities=12% Similarity=0.078 Sum_probs=197.0
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe---eeeeeccccCCEEEEEECCCCC-EEEEEeCCCcEEE
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQI 133 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i 133 (290)
....+|.+.|++++|+| ++.+|++++.||.|++|++.++. ....+..|...|.+++|+|+++ +|++++.+|.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 44568999999999999 77889999999999999998876 3444557999999999999999 9999999999999
Q ss_pred EcC-CCCceEEEEec--CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCc---------ccEEEeeecCCCCeEEEEEcC
Q 022910 134 WDP-SSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---------AAYLNMFSGHGSSVTCGDFTP 201 (290)
Q Consensus 134 ~d~-~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~~ 201 (290)
|++ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+. +...|.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 77765 67778 999999999999 99999999999999999998 77777776 889999999998
Q ss_pred CCCEEEEEeCCCeEEEEcCCC-Ceee-EEEeCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC------cEEE
Q 022910 202 DGKTICTGSDDATLRVWNPKS-GENI-HVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTG------KVVS 272 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~------~~~~ 272 (290)
++ +++++.++.|++||+++ +... ..... .+...+.+++|+| ++++|++++.||.|++|++... +.+.
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeec--CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 76 99999999999999998 5432 22222 2678899999999 9999999999999999999887 7888
Q ss_pred EEccCCC---------cEEEEEEecCC
Q 022910 273 SLVSHTD---------SIECIGFSRSE 290 (290)
Q Consensus 273 ~~~~~~~---------~v~~i~~s~d~ 290 (290)
.+..|.. .|++++|+|++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred eeecccccccccccceeEEEEEEcCCC
Confidence 8888865 99999999985
No 83
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.6e-36 Score=255.56 Aligned_cols=217 Identities=15% Similarity=0.254 Sum_probs=181.0
Q ss_pred CCceeeeccCC------------cCEEEEEECCCCC-cEEEEecCCCcEEEEEccCCeee--------------------
Q 022910 54 DDSTHIFSGHS------------DEVYSVACSPTDA-TLVATGGGDDKGFFWRINQGDWA-------------------- 100 (290)
Q Consensus 54 ~~~~~~~~~h~------------~~v~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~-------------------- 100 (290)
......+.+|. +.|++++|+|++. .+|++++.|+.|++|++.++...
T Consensus 71 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 150 (447)
T 3dw8_B 71 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVT 150 (447)
T ss_dssp EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCC
T ss_pred eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCccccc
Confidence 34578899998 8899999999432 68889999999999999764432
Q ss_pred -------------------ee-eccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEE-------EEecCCCCE
Q 022910 101 -------------------SE-IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKC-------TLEGPGGGV 152 (290)
Q Consensus 101 -------------------~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-------~~~~~~~~i 152 (290)
.. ..+|...|.+++|+|++++|+++ .|+.|++||+.+ ++.+. .+..|...|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 229 (447)
T 3dw8_B 151 TLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVI 229 (447)
T ss_dssp SCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCE
T ss_pred ceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcce
Confidence 12 35799999999999999999998 799999999984 34443 245788899
Q ss_pred EEEEEcCCC-CEEEEeeCCCeEEEEECCcccE----EEeeecCCC------------CeEEEEEcCCCCEEEEEeCCCeE
Q 022910 153 EWVSWHPRG-HIVLAGSEDSTVWMWNADRAAY----LNMFSGHGS------------SVTCGDFTPDGKTICTGSDDATL 215 (290)
Q Consensus 153 ~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i 215 (290)
.+++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV 308 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE
Confidence 999999998 9999999999999999999886 677777775 8999999999999999999 999
Q ss_pred EEEcCCC-CeeeEEEeCCCCccc------------CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 022910 216 RVWNPKS-GENIHVIRGHPYHTE------------GLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS 272 (290)
Q Consensus 216 ~i~d~~~-~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 272 (290)
++||+++ ++++..+..+..... .+..++|+|++++|++|+.||.|++||+.+++.+.
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 9999997 777777776421111 13358999999999999999999999999988763
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.5e-34 Score=236.47 Aligned_cols=231 Identities=20% Similarity=0.339 Sum_probs=206.3
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
..+.+.+.+|...|.+++|+| ++.+|++|+.|+.|++|+............+...+..+.+++++++|++++.|+.+++
T Consensus 76 ~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 76 GIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred ceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 456788999999999999999 7889999999999999999999988888888999999999999999999999999999
Q ss_pred EcCCCCceE-EEEecCCCCEEEEEEcCCC--CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe
Q 022910 134 WDPSSGNLK-CTLEGPGGGVEWVSWHPRG--HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 134 ~d~~~~~~~-~~~~~~~~~i~~i~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
|++...... .....|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|..+|++++|+|++++|++|+
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 998766543 3445688899999998864 5789999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc---------cCCCcE
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV---------SHTDSI 281 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~---------~~~~~v 281 (290)
.||.|++||+++.+.+..+. +...+.+++|+|++.++ +++.|+.|++||++++..+..+. +|...|
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLD----GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEE----CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred CCCeEEEEEeccCceeeeec----CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 99999999999999988887 45689999999987655 56679999999999888776654 578899
Q ss_pred EEEEEecCC
Q 022910 282 ECIGFSRSE 290 (290)
Q Consensus 282 ~~i~~s~d~ 290 (290)
++++|+|+|
T Consensus 310 ~~l~~s~dg 318 (340)
T 4aow_A 310 TSLAWSADG 318 (340)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 999999986
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-36 Score=249.10 Aligned_cols=221 Identities=20% Similarity=0.313 Sum_probs=183.3
Q ss_pred ceeeeccCCcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCC--CCEEEEEeCCCc
Q 022910 56 STHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLDGL 130 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~ 130 (290)
.+..+.+|.++|.+++|+|. ++.+|++|+.|++|++||+.+++ ....+.+|...|.+++|+|+ +.+|++++.|+.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 46789999999999999863 47899999999999999998863 55677889999999999998 789999999999
Q ss_pred EEEEcCCCCce---EEEEecCCCCEEEEEEcCC-----------------CCEEEEeeCCCeEEEEECCcc---cEEEee
Q 022910 131 VQIWDPSSGNL---KCTLEGPGGGVEWVSWHPR-----------------GHIVLAGSEDSTVWMWNADRA---AYLNMF 187 (290)
Q Consensus 131 i~i~d~~~~~~---~~~~~~~~~~i~~i~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~ 187 (290)
|++|++..+.. ...+..|...+.+++|+|+ +++|++|+.|+.|++||++.. +.+..+
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 99999987642 2345678888999999997 468999999999999999754 467788
Q ss_pred ecCCCCeEEEEEcCCC----CEEEEEeCCCeEEEEcCCCCe----eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCc
Q 022910 188 SGHGSSVTCGDFTPDG----KTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (290)
Q Consensus 188 ~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (290)
.+|...|.+++|+|++ .+|++++.||+|++|++.+.. ....+.. |...|.+++|+|++++|++++.||.
T Consensus 209 ~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~---~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK---FNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE---CSSCEEEEEECTTTCCEEEEESSSC
T ss_pred ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc---CCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 8999999999999986 899999999999999987631 1223333 6788999999999999999999999
Q ss_pred EEEEEcCC-C--cEEEEEccCCC
Q 022910 260 VHMVNITT-G--KVVSSLVSHTD 279 (290)
Q Consensus 260 i~~wd~~~-~--~~~~~~~~~~~ 279 (290)
|++|+... + .++..+....+
T Consensus 286 v~lw~~~~~g~~~~~~~~~~~~~ 308 (316)
T 3bg1_A 286 VTLWKESVDGQWVCISDVNKGQG 308 (316)
T ss_dssp EEEEEECTTSCEEEEEECC----
T ss_pred EEEEEECCCCcEEEeeeccCCCC
Confidence 99999863 3 45555654443
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-34 Score=249.41 Aligned_cols=228 Identities=24% Similarity=0.397 Sum_probs=205.2
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEEC--CCCCEEEEEeCCCc
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFS--MDGQLLASGGLDGL 130 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~ 130 (290)
..+.+..+.+|.+.|.+++|+| ++ +|++|+.||+|++|++.+++.+..+.+|...|.+++|+ +++++|++++.||.
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred CCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 3567888999999999999998 54 88999999999999999999999999999999999998 57789999999999
Q ss_pred EEEEcCCCCce-----------------------EEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee
Q 022910 131 VQIWDPSSGNL-----------------------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (290)
Q Consensus 131 i~i~d~~~~~~-----------------------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 187 (290)
|++|++.++.. +..+.+|...+.++ +++++++++++.||.|++||+++++.+..+
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 99999987653 44567788888877 567899999999999999999999999999
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 188 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.. |...|.+++|+ +.+|++|+.||.|++||+.+
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG---HTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999999999999999888877 78899999997 57999999999999999999
Q ss_pred CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 ~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++....+. |...+..++|+|++
T Consensus 382 ~~~~~~~~-~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 382 YSRKFSYH-HTNLSAITTFYVSD 403 (464)
T ss_dssp CCEEEEEE-CTTCCCEEEEEECS
T ss_pred Cceeeeec-CCCCccEEEEEeCC
Confidence 88776664 56778888898875
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.3e-35 Score=245.67 Aligned_cols=200 Identities=17% Similarity=0.140 Sum_probs=169.9
Q ss_pred CCcCEEEEEECCCCCcEEE--EecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc
Q 022910 63 HSDEVYSVACSPTDATLVA--TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (290)
+...+.+++|+| ++++++ +++.|++|+|||+.+++.+..+. |...|.+++|+|++++|++++.+ .+++|+..+++
T Consensus 132 ~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~ 208 (365)
T 4h5i_A 132 ADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGS 208 (365)
T ss_dssp TTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCC
T ss_pred cccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCc
Confidence 445689999999 555544 55678999999999999988886 77889999999999999999855 56677777776
Q ss_pred eEEE--EecCCCCEEEEEEcCCCCEEEEeeCCC----eEEEEECCcccE----EEeeecCCCCeEEEEEcCCCCEEEEEe
Q 022910 141 LKCT--LEGPGGGVEWVSWHPRGHIVLAGSEDS----TVWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 141 ~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
.+.. ...|...|.+++|+|+++++++++.++ .+++|++..... ...+.+|..+|++++|+|+|++|++|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 5543 345777899999999999999998877 688899876543 356678999999999999999999999
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
.|+.|+|||+++++++..+.. .|...|++++|+|+|++|++|+.|++|+||++..
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~--gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQ--AHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETT--SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEECCCCcEEEEecC--cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999998877632 2889999999999999999999999999999964
No 88
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.5e-35 Score=245.48 Aligned_cols=177 Identities=18% Similarity=0.230 Sum_probs=150.5
Q ss_pred CEEEEEECCCCCEEEEEe--CCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEE-
Q 022910 109 SVSSLAFSMDGQLLASGG--LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN- 185 (290)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~- 185 (290)
.+.+++|+|+|+++++++ .|++|+|||+.+++.+..+. |.+.|.+++|+|++++|++++.+ .+++|+..+++.+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceee
Confidence 477899999999877554 68999999999999988886 66789999999999999999865 56666666665543
Q ss_pred -eeecCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEcCCCCeee----EEEeCCCCcccCeEEEEEcCCCCEEEEEeC
Q 022910 186 -MFSGHGSSVTCGDFTPDGKTICTGSDDA----TLRVWNPKSGENI----HVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 186 -~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
....|...|.+++|+|+++++++++.++ .+++|++...... ..+.. |...|++++|+|+|++||+|+.
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN---RFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES---SCSCEEEEEECTTSCEEEEEET
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC---CCCCeEeEEECCCCCceEEEcC
Confidence 3456888999999999999999998887 6888998776542 23333 7789999999999999999999
Q ss_pred CCcEEEEEcCCCcEEEEE-ccCCCcEEEEEEecCC
Q 022910 257 DGSVHMVNITTGKVVSSL-VSHTDSIECIGFSRSE 290 (290)
Q Consensus 257 dg~i~~wd~~~~~~~~~~-~~~~~~v~~i~~s~d~ 290 (290)
|++|+|||+.+++++..+ .+|..+|++++|||||
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 999999999999999986 6899999999999996
No 89
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-35 Score=250.28 Aligned_cols=222 Identities=21% Similarity=0.350 Sum_probs=193.3
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCe----eeeeeccccCCEEEEEECC-CCCEEEEEeCCCcEEEEcCCCC-
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD----WASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSSG- 139 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~- 139 (290)
....++++|....++++++.+|.|+||++.... ....+.+|...|++++|+| ++++|++++.||.|++|++.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 345688998555566678999999999996642 3445778999999999999 8999999999999999999988
Q ss_pred ------ceEEEEecCCCCEEEEEEcCCC-CEEEEeeCCCeEEEEECCcccEEEee--ecCCCCeEEEEEcCCCCEEEEEe
Q 022910 140 ------NLKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMF--SGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 140 ------~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 6678889999999999999998 69999999999999999999999998 78999999999999999999999
Q ss_pred CCCeEEEEcCCCCeeeEEE-eCCCCccc-CeEEEEEcCCCCEEEEE---eCCCcEEEEEcCCCcE-EEEEc-cCCCcEEE
Q 022910 211 DDATLRVWNPKSGENIHVI-RGHPYHTE-GLTCLTISADSTLALSG---SKDGSVHMVNITTGKV-VSSLV-SHTDSIEC 283 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~-~~~~~~~~-~v~~~~~~~~~~~l~~~---~~dg~i~~wd~~~~~~-~~~~~-~~~~~v~~ 283 (290)
.||.|++||+++++.+..+ .. |.. .+.++.|+|++.+|++| +.|+.|++||+++++. +.... .|...|.+
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRP---HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECS---SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred cCCcEEEEeCCCCceeeeeccC---CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 9999999999999988887 44 444 48999999999999999 7899999999998664 33333 46788999
Q ss_pred EEEecCC
Q 022910 284 IGFSRSE 290 (290)
Q Consensus 284 i~~s~d~ 290 (290)
++|+|++
T Consensus 273 ~~~s~~~ 279 (402)
T 2aq5_A 273 PFFDPDT 279 (402)
T ss_dssp EEEETTT
T ss_pred EEEcCCC
Confidence 9999985
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-34 Score=245.77 Aligned_cols=229 Identities=21% Similarity=0.360 Sum_probs=198.8
Q ss_pred CCCceeee--ccCCcC--EEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc-ccCCEEEEEECCCCCEEEEEeC
Q 022910 53 PDDSTHIF--SGHSDE--VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGGL 127 (290)
Q Consensus 53 ~~~~~~~~--~~h~~~--v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 127 (290)
+..+.+.+ .+|... +.+++|++ ..+++++.++.|++|++.+++....+.. |...|.+++|+|++++|++++.
T Consensus 78 ~~~p~~~~~~~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~ 154 (401)
T 4aez_A 78 NTTPERVLDAPGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG 154 (401)
T ss_dssp CCSCSEEEECTTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCcceeeeCCCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC
Confidence 44444444 477765 45577765 2356777899999999999988777665 7899999999999999999999
Q ss_pred CCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECC-cccEEEeeecCCCCeEEEEEcCCCCEE
Q 022910 128 DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (290)
Q Consensus 128 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l 206 (290)
+|.|++|++.+++.+..+..|...|.+++| ++++|++++.+|.|++||++ ....+..+..|...|.+++|+|++++|
T Consensus 155 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 232 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQL 232 (401)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEE
Confidence 999999999999999999999999999999 46799999999999999999 567788888999999999999999999
Q ss_pred EEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC-CEEEEEe--CCCcEEEEEcCCCcEEEEEccCCCcEEE
Q 022910 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGS--KDGSVHMVNITTGKVVSSLVSHTDSIEC 283 (290)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 283 (290)
++++.||.|++||+++++....+.. |...|.+++|+|++ .++++|+ .|+.|++||+.+++++..+. +...|++
T Consensus 233 ~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~ 308 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSIPKFTKTN---HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTS 308 (401)
T ss_dssp EEEETTSCEEEEETTCSSEEEEECC---CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred EEEeCCCeEEEccCCCCCccEEecC---CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEE
Confidence 9999999999999999988888776 78899999999966 5666654 69999999999999999886 5678999
Q ss_pred EEEecCC
Q 022910 284 IGFSRSE 290 (290)
Q Consensus 284 i~~s~d~ 290 (290)
++|+|+|
T Consensus 309 ~~~s~~~ 315 (401)
T 4aez_A 309 LIWSPHS 315 (401)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 9999985
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-35 Score=243.08 Aligned_cols=227 Identities=12% Similarity=0.100 Sum_probs=199.2
Q ss_pred ceeeeccCCcCEEEEEECCCCCc-EEEEecCCCcEEEEEc-cCCeeeeeecc--ccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 56 STHIFSGHSDEVYSVACSPTDAT-LVATGGGDDKGFFWRI-NQGDWASEIQG--HKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
....+.+|...|.+++|+| ++. +|++|+.+|.|++|++ .+++. ..+.. |...|.+++|+| +++|++++.|+.|
T Consensus 48 ~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i 124 (342)
T 1yfq_A 48 DLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLI 124 (342)
T ss_dssp EEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEE
T ss_pred cceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeE
Confidence 3566779999999999999 677 8999999999999999 77654 66777 999999999999 9999999999999
Q ss_pred EEEcCCC---------CceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCc-cc--EEEeeecCCCCeEEEEE
Q 022910 132 QIWDPSS---------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-AA--YLNMFSGHGSSVTCGDF 199 (290)
Q Consensus 132 ~i~d~~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~~~~~i~~~~~ 199 (290)
++||+.+ ++++..+. +...+.+++|+|++ +++++.++.|++||+++ +. .......+...+.+++|
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 125 EVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp EEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred EEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 9999987 77666666 78889999999887 99999999999999998 54 33444567889999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEcCCCC------eeeEEEeCCCC------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 200 TP-DGKTICTGSDDATLRVWNPKSG------ENIHVIRGHPY------HTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 200 ~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
+| ++++|++++.+|.|++|++... +....+..+.. |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 202 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 99 9999999999999999999877 67777776421 24489999999999999999999999999999
Q ss_pred CCcEEEEEccC-CCcEEEEEEecCC
Q 022910 267 TGKVVSSLVSH-TDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~~~~~~~~~-~~~v~~i~~s~d~ 290 (290)
+++++..+.+| ..+|++++ |+|
T Consensus 282 ~~~~~~~~~~~h~~~v~~~~--~~~ 304 (342)
T 1yfq_A 282 TRKKIKNFAKFNEDSVVKIA--CSD 304 (342)
T ss_dssp TTEEEEECCCCSSSEEEEEE--ECS
T ss_pred cHhHhhhhhcccCCCceEec--CCC
Confidence 99999999998 99999998 764
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-35 Score=251.73 Aligned_cols=226 Identities=16% Similarity=0.233 Sum_probs=195.3
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc---CCeeeeeecc------------ccCCEEEEE--ECCCCCEEEE
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN---QGDWASEIQG------------HKDSVSSLA--FSMDGQLLAS 124 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~~~~~~~------------~~~~i~~~~--~~~~~~~l~~ 124 (290)
+|...|++++|+| ++.+|++|+.||.|++|++. .++....+.. +...+.++. +++++.+|++
T Consensus 109 ~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 5999999999999 88899999999999999995 4444333321 455677776 5678999999
Q ss_pred EeCCCcEEEEcCCCCceEEEEec--CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee-cCCCCeEEEEEcC
Q 022910 125 GGLDGLVQIWDPSSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTP 201 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~ 201 (290)
++.||.|++||+.+++.+..+.. |...|++++|+|++++|++|+.||.|++||+++++++..+. .|..+|.+++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999999999988 78899999999999999999999999999999999988876 6788999997665
Q ss_pred ----CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCC-----------------------CcccCeEEEEEcCCCCEEEEE
Q 022910 202 ----DGKTICTGSDDATLRVWNPKSGENIHVIRGHP-----------------------YHTEGLTCLTISADSTLALSG 254 (290)
Q Consensus 202 ----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~ 254 (290)
++.+|++++.||.|++||+++++.+..+..+. .|...|++++|+ ++++|++|
T Consensus 268 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 346 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD 346 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec
Confidence 57799999999999999999999888887542 156679999999 77999999
Q ss_pred eCCCcEEEEEcCCCcEEEEEcc-------------------------------------CCCcEEEEEEecC
Q 022910 255 SKDGSVHMVNITTGKVVSSLVS-------------------------------------HTDSIECIGFSRS 289 (290)
Q Consensus 255 ~~dg~i~~wd~~~~~~~~~~~~-------------------------------------~~~~v~~i~~s~d 289 (290)
+.||.|++||+.+++.+..+.+ |...|++++|+++
T Consensus 347 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 347 EATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp GGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred CCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 9999999999999987777765 7889999999886
No 93
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-34 Score=239.76 Aligned_cols=217 Identities=16% Similarity=0.258 Sum_probs=188.6
Q ss_pred CceeeeccCCcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCC---------eeeeeeccccCCEEEEEECCC--CCEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQG---------DWASEIQGHKDSVSSLAFSMD--GQLL 122 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l 122 (290)
.....+.+|...|++++|+|. ++.+|++|+.||.|++|++.++ +.+..+..|...|.+++|+|+ +++|
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 567788999999999999995 4789999999999999999886 557778889999999999999 9999
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEe-------------cCCCCEEEEEEcCC---CCEEEEeeCCCeEEEEECCcccE--E
Q 022910 123 ASGGLDGLVQIWDPSSGNLKCTLE-------------GPGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAAY--L 184 (290)
Q Consensus 123 ~~~~~dg~i~i~d~~~~~~~~~~~-------------~~~~~i~~i~~~~~---~~~l~~~~~dg~i~i~d~~~~~~--~ 184 (290)
++++.||.|++||+.+++.+..+. .+...+.+++|+|+ +.+|++++.++.+.+|+...++. +
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 999999999999998876543332 46778999999997 89999999999998888887764 6
Q ss_pred EeeecCCCCeEEEEEcCCC----CEEEEEeCCCeEEEEcCCCC-------------------------------------
Q 022910 185 NMFSGHGSSVTCGDFTPDG----KTICTGSDDATLRVWNPKSG------------------------------------- 223 (290)
Q Consensus 185 ~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~------------------------------------- 223 (290)
..+.+|...|.+++|+|++ ++|++++.||.|++||++.+
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 7778899999999999998 89999999999999999864
Q ss_pred ---------eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE
Q 022910 224 ---------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (290)
Q Consensus 224 ---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 274 (290)
+.+..+.. |...|++++|+|++++|++|+.||.|++|++.+++.+..+
T Consensus 288 ~~~~~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDD---HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ---CCSEEEEEEEEECT---TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeecccccccEEEEEec---ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 33344444 7889999999999999999999999999999987655444
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.4e-34 Score=243.93 Aligned_cols=226 Identities=24% Similarity=0.512 Sum_probs=193.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.+.+..+.+|...|.+++|++ ..+++|+.||.|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE
T ss_pred CcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE
Confidence 455677778888888888854 46778888888888888888888888888888888888 6778888888888888
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 213 (290)
||+.+++.+..+..|...|.++.| ++.++++++.||.|++||+++++.+..+.+|...+.++.++ +++|++++.||
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg 339 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADS 339 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTS
T ss_pred EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCC
Confidence 888888888888888888888888 67889999999999999999888888888888888888774 66899999999
Q ss_pred eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE-----ccCCCcEEEEEEec
Q 022910 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL-----VSHTDSIECIGFSR 288 (290)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-----~~~~~~v~~i~~s~ 288 (290)
.|++||+++++.+..+.....|...|++++|+ +++|++|+.||.|++||+.+++.+..+ ..|.+.|++++|+|
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 99999999999888888766688899999996 579999999999999999999999988 46788999999999
Q ss_pred CC
Q 022910 289 SE 290 (290)
Q Consensus 289 d~ 290 (290)
+|
T Consensus 418 ~~ 419 (445)
T 2ovr_B 418 TK 419 (445)
T ss_dssp SE
T ss_pred CE
Confidence 85
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=240.92 Aligned_cols=216 Identities=19% Similarity=0.290 Sum_probs=188.2
Q ss_pred CCceeeeccCCcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCC--CCEEEEEeCC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLD 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d 128 (290)
...+..+.+|...|++++|+|. ++.+|++|+.||.|++|++.+++ .+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 45 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 4567788999999999999973 27899999999999999999987 67778889999999999999 9999999999
Q ss_pred CcEEEEcCCCCc--eEEEEecCCCCEEEEEEcC-------------CCCEEEEeeCCCeEEEEECCccc----EEEeeec
Q 022910 129 GLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHP-------------RGHIVLAGSEDSTVWMWNADRAA----YLNMFSG 189 (290)
Q Consensus 129 g~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~ 189 (290)
|.|++||+.++. ....+..|...|.+++|+| ++.+|++++.||.|++||++++. ....+.+
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 999999998873 4456678899999999999 69999999999999999998754 4567778
Q ss_pred CCCCeEEEEEcCC---CCEEEEEeCCCeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 190 HGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 190 ~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
|...|.+++|+|+ +++|++++.||.|++||++++.. ...+.....+...|++++|+|++++|++++.||.|++|+
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 9999999999999 89999999999999999988642 223333334778899999999999999999999999999
Q ss_pred cCCCc
Q 022910 265 ITTGK 269 (290)
Q Consensus 265 ~~~~~ 269 (290)
+....
T Consensus 285 ~~~~~ 289 (379)
T 3jrp_A 285 ENLEG 289 (379)
T ss_dssp EEETT
T ss_pred CCCCC
Confidence 98543
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.6e-35 Score=251.91 Aligned_cols=235 Identities=15% Similarity=0.151 Sum_probs=191.9
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec--cccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
.....+.+|.+.|++|+|+|.++.+|++|+.||+|++||+.++....... .+...+.+++|+|++++|++|+.||.|+
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 34456679999999999999778899999999999999998765444333 3345678999999999999999999999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEE---eeecCCCCeEEEEEcCCCCEEEE
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN---MFSGHGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~ 208 (290)
+||+.. +.+..+..|...|.+++|+|++. +|++|+.|+.|++||+++.+... ...+|...|++++|+|++.+|++
T Consensus 235 ~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s 313 (435)
T 4e54_B 235 LLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLT 313 (435)
T ss_dssp EEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEE
T ss_pred eeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEE
Confidence 999864 55677888999999999999876 78899999999999998875443 33568999999999999999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCc---ccCeEEEEEcCCCCEEEEEeC------------CCcEEEEEcCCCcEEEE
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYH---TEGLTCLTISADSTLALSGSK------------DGSVHMVNITTGKVVSS 273 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~------------dg~i~~wd~~~~~~~~~ 273 (290)
++.||.|++||++++.....+..+... ...+..+.|+|++.++++++. ++.|++||..+++++..
T Consensus 314 ~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~ 393 (435)
T 4e54_B 314 TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ 393 (435)
T ss_dssp EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE
T ss_pred EcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE
Confidence 999999999999998887776553211 112334567777777766642 35799999999999988
Q ss_pred Ec-cCCCcEEEE-EEecCC
Q 022910 274 LV-SHTDSIECI-GFSRSE 290 (290)
Q Consensus 274 ~~-~~~~~v~~i-~~s~d~ 290 (290)
+. +|...|.++ +|||+|
T Consensus 394 l~~~~~~~v~s~~~fspdg 412 (435)
T 4e54_B 394 LYDPESSGISSLNEFNPMG 412 (435)
T ss_dssp ECCSSCCCCCCEEEECTTS
T ss_pred EeCCCCCcEEEEEEECCCC
Confidence 75 677889887 699986
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-34 Score=256.27 Aligned_cols=221 Identities=18% Similarity=0.270 Sum_probs=203.1
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC----eeeeeeccccCC-EEEEEECC--CCCEEEEEeCCCcEEEE
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDS-VSSLAFSM--DGQLLASGGLDGLVQIW 134 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~-i~~~~~~~--~~~~l~~~~~dg~i~i~ 134 (290)
.|.+.|.+++|+| ++.+|++++ ++.|++|++.++ +....+.+|... |++++|+| ++++|++++.||.|++|
T Consensus 16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6889999999999 777888887 789999999998 888999999999 99999999 99999999999999999
Q ss_pred cCCCC--------ceEEEEecCCCCEEEEEEcCCCCEEEEeeCC----CeEEEEECCcccEEEeeecCCCCeEEEEEcCC
Q 022910 135 DPSSG--------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFSGHGSSVTCGDFTPD 202 (290)
Q Consensus 135 d~~~~--------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (290)
++.++ +....+..|..+|.+++|+|++++|++++.+ +.|++|+ .++.+..+.+|...|.+++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence 99754 6677888899999999999999999999987 6888888 56778888999999999999999
Q ss_pred CC-EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCccc---CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEE-c-
Q 022910 203 GK-TICTGSDDATLRVWNPKSGENIHVIRGHPYHTE---GLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSL-V- 275 (290)
Q Consensus 203 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~-~- 275 (290)
++ +|++++.|+.|++||+.+++.+..+.. |.. .|++++|+|+ +++|++++.||.|++||+.+++.+..+ .
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 248 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRT---HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD 248 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECS---SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecc---cCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc
Confidence 97 899999999999999999998888887 566 8999999999 999999999999999999999999999 6
Q ss_pred --cCCCcEEEEEEecCC
Q 022910 276 --SHTDSIECIGFSRSE 290 (290)
Q Consensus 276 --~~~~~v~~i~~s~d~ 290 (290)
.|...|++++|+ ++
T Consensus 249 ~~~~~~~v~~~~~~-~~ 264 (615)
T 1pgu_A 249 QEPVQGGIFALSWL-DS 264 (615)
T ss_dssp TBCCCSCEEEEEES-SS
T ss_pred ccccCCceEEEEEc-CC
Confidence 899999999998 54
No 98
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.4e-35 Score=248.90 Aligned_cols=215 Identities=15% Similarity=0.123 Sum_probs=167.9
Q ss_pred CCcEEEEecCCCcEEEEEccCCeee-----eeeccccCCEEEEEECC--------CCCEEEEEeCCCcEEEEcCCCCceE
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWA-----SEIQGHKDSVSSLAFSM--------DGQLLASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~i~~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (290)
++.+|++|+.|++|+||++..+... ..+.+|.+.|.+++|+| ++++||+++.|++|+|||+.++..+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 6678999999999999999887543 34678999999999997 7889999999999999999998888
Q ss_pred EEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEe-------------------------eecCCCCeEE
Q 022910 143 CTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNM-------------------------FSGHGSSVTC 196 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~-------------------------~~~~~~~i~~ 196 (290)
..+..|..++.+++|+|++. +|++++.||.|++||+++++.... ..+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 88888999999999999874 899999999999999988754322 1346678888
Q ss_pred EEEc-CCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC---------------cccCeEEEEEcC--CCCEEEEEeCCC
Q 022910 197 GDFT-PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY---------------HTEGLTCLTISA--DSTLALSGSKDG 258 (290)
Q Consensus 197 ~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~--~~~~l~~~~~dg 258 (290)
+.|+ |+++.|++++.|+.+++||+..++....+..+.. .........|+| ++.++++|+.||
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg 339 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG 339 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC
Confidence 9887 7999999999999999999988766555443110 001111223443 455777888999
Q ss_pred cEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 259 SVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 259 ~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.|++||+.+++++..+..|..+|++++|||||
T Consensus 340 ~V~lwd~~~~~~~~~~~~~~~~V~svafspdG 371 (393)
T 4gq1_A 340 LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDG 371 (393)
T ss_dssp EEEEEETTCTTCCEEEEECSSCEEEEEECTTS
T ss_pred EEEEEECCCCcEEEEecCCCCcEEEEEEcCCC
Confidence 99999999999999888999999999999997
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.4e-34 Score=243.29 Aligned_cols=222 Identities=23% Similarity=0.522 Sum_probs=202.9
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
..+....+.+|.+.|.+++| ++.+|++|+.||.|++|++.+++.+..+..|...|.+++|+ +.++++++.||.|+
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~ 236 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIA 236 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEE
T ss_pred CCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEE
Confidence 35677889999999999999 44689999999999999999999999999999999999996 45999999999999
Q ss_pred EEcCCCCceE---EEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE
Q 022910 133 IWDPSSGNLK---CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (290)
Q Consensus 133 i~d~~~~~~~---~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 209 (290)
+||+.++... ..+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+.+|...|.++.|+ +++|++|
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g 312 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSG 312 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEE
Confidence 9999988765 667789999999999 68899999999999999999999999999999999999994 6799999
Q ss_pred eCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc---------EEEEEccCCCc
Q 022910 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK---------VVSSLVSHTDS 280 (290)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---------~~~~~~~~~~~ 280 (290)
+.||.|++||+++++.+..+.. |...|.+++| ++.+|++|+.||.|++||+.+++ ++..+.+|.+.
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~ 387 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEG---HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR 387 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECC---CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC
T ss_pred eCCCeEEEEECCCCCEEEEEeC---CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC
Confidence 9999999999999999888887 7889999999 68899999999999999998776 89999999999
Q ss_pred EEEEEEec
Q 022910 281 IECIGFSR 288 (290)
Q Consensus 281 v~~i~~s~ 288 (290)
|++++|.+
T Consensus 388 v~~l~~~~ 395 (435)
T 1p22_A 388 VFRLQFDE 395 (435)
T ss_dssp CCCEEECS
T ss_pred eEEEEeCC
Confidence 99999843
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9e-34 Score=270.59 Aligned_cols=209 Identities=23% Similarity=0.389 Sum_probs=186.9
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECC--CCCEEEEEeCCCc
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGL 130 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~ 130 (290)
....+..+.+|.+.|.+++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.++++++.||.
T Consensus 646 ~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 646 TGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 3567888999999999999999 778999999999999999999999999999999999999999 4558999999999
Q ss_pred EEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee-----------------------
Q 022910 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF----------------------- 187 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------------------- 187 (290)
|++||+.+++.+..+.+|...|++++|+|++++|++++.||.|++||+++++....+
T Consensus 725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 999999999999999999999999999999999999999999999999876543322
Q ss_pred --------------------------------ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCc
Q 022910 188 --------------------------------SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH 235 (290)
Q Consensus 188 --------------------------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 235 (290)
.+|...|.+++|+|+++++++++.+|.|++|++.++..+..+.+ |
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---h 881 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG---H 881 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC---C
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC---C
Confidence 15677899999999999999999999999999999988887776 6
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 236 TEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 236 ~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
...|++++|+|++++|++++.||.|++|++
T Consensus 882 ~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 882 LSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 778888888888888888888888777774
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.6e-33 Score=238.63 Aligned_cols=219 Identities=27% Similarity=0.530 Sum_probs=199.1
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEc
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (290)
.+....+|...|++++| ++.+|++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||
T Consensus 125 ~~~~~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 125 RIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp CEECCCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred EEecccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEE
Confidence 34444567788999988 4578999999999999999999999999999999999999 788999999999999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEE---EeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL---NMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
+.+++.+..+..|...|.+++|+ +.++++|+.||.|++||++++... ..+.+|...|.+++| ++++|++|+.|
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 99999999999999999999997 459999999999999999987654 667789999999999 68899999999
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
|.|++||+++++.+..+.. |...|.++.| ++.+|++|+.||.|++||+++++++..+.+|...|++++|.+
T Consensus 276 g~i~vwd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 346 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNG---HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN 346 (435)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCS
T ss_pred CeEEEEECCcCcEEEEEcC---CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecC
Confidence 9999999999999888886 7788999999 467999999999999999999999999999999999999853
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4e-33 Score=247.61 Aligned_cols=230 Identities=21% Similarity=0.301 Sum_probs=207.1
Q ss_pred CceeeeccCCcC-EEEEEECCC-CCcEEEEecCCCcEEEEEccCC--------eeeeeeccccCCEEEEEECCCCCEEEE
Q 022910 55 DSTHIFSGHSDE-VYSVACSPT-DATLVATGGGDDKGFFWRINQG--------DWASEIQGHKDSVSSLAFSMDGQLLAS 124 (290)
Q Consensus 55 ~~~~~~~~h~~~-v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~ 124 (290)
.....+.+|.+. |++++|+|. ++.+|++|+.||.|++|++.++ +....+..|..+|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 688999999999 999999993 4568889999999999999754 667778889999999999999999999
Q ss_pred EeCC----CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeeecCCC---CeEE
Q 022910 125 GGLD----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGS---SVTC 196 (290)
Q Consensus 125 ~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~i~~ 196 (290)
++.+ +.|++|+ .++.+..+..|...|.+++|+|+++ ++++++.++.|++||+.+++.+..+..|.. .|.+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9987 6888988 6778888999999999999999998 899999999999999999999999999998 9999
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEE-eCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE
Q 022910 197 GDFTPD-GKTICTGSDDATLRVWNPKSGENIHVI-RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (290)
Q Consensus 197 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 274 (290)
++|+|+ +++|++++.||.|++||+++++.+..+ .....|...|.+++|+ ++.+|++++.||.|++||+.+++.+..+
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999 999999999999999999999988877 3111278899999999 9999999999999999999999999999
Q ss_pred ccC----CCcEEEEEEe
Q 022910 275 VSH----TDSIECIGFS 287 (290)
Q Consensus 275 ~~~----~~~v~~i~~s 287 (290)
..+ ...+.++.|+
T Consensus 291 ~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp ECCTTCGGGCEEEEEEE
T ss_pred cCCCCcccCceeEEEeC
Confidence 876 3677787775
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-34 Score=243.88 Aligned_cols=222 Identities=16% Similarity=0.092 Sum_probs=190.4
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe---eeeeecc-----------------------------------
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQG----------------------------------- 105 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~----------------------------------- 105 (290)
..++.+++|+| ++.+|+++ .++.|++|++.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 35889999999 55666555 47899999999887 5444432
Q ss_pred -------------------ccCCEEEEEECCCCCEE-EEEeCCCcEEEEcCC--CCceEEEEe--cCCCCEEEEEEcCCC
Q 022910 106 -------------------HKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPS--SGNLKCTLE--GPGGGVEWVSWHPRG 161 (290)
Q Consensus 106 -------------------~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~--~~~~~~~~~--~~~~~i~~i~~~~~~ 161 (290)
|...|++++|+|++++| ++++.||.|++|++. +++.+..+. .+...|.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 33379999999999996 889999999999999 888888876 566889999999999
Q ss_pred CEEEEeeCCCeEEEEECCcccEEE----eeecCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC
Q 022910 162 HIVLAGSEDSTVWMWNADRAAYLN----MFSGHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENIHVIRGHPY 234 (290)
Q Consensus 162 ~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 234 (290)
++|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+.. .
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~ 239 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF--G 239 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC--C
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec--C
Confidence 999999999999999998876544 77889999999999999 99999999999999999999887776432 2
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccC-------------------------CCcEEEEEEecC
Q 022910 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH-------------------------TDSIECIGFSRS 289 (290)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------------------------~~~v~~i~~s~d 289 (290)
|...|++++|+ ++++|++|+.|+.|++||+.+++++..+..+ ...|.+++|+|+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 78899999999 9999999999999999999999999888632 357999999997
Q ss_pred C
Q 022910 290 E 290 (290)
Q Consensus 290 ~ 290 (290)
+
T Consensus 319 ~ 319 (450)
T 2vdu_B 319 L 319 (450)
T ss_dssp S
T ss_pred C
Confidence 5
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.8e-33 Score=238.51 Aligned_cols=220 Identities=25% Similarity=0.526 Sum_probs=202.6
Q ss_pred CceeeeccCCcCE-EEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 55 DSTHIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 55 ~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.....+.+|.+.| .++.+ ++.+|++|+.||.|++|++.+++.+..+.+|...|.+++|+ +++|++++.||.|++
T Consensus 109 ~~~~~l~~h~~~v~~~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 109 KSPKVLKGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp CCCEEEECSTTSCEEEEEE---ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred ceeEEecccCCCcEEEEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 4567899999875 66555 45789999999999999999999999999999999999996 679999999999999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 213 (290)
||+.+++.+..+..|...|.++.|+ ++.+++|+.||.|++||+++++.+..+.+|...|.+++| ++++|++++.||
T Consensus 184 wd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 184 WNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred EECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 9999999999999999999999995 578999999999999999999999999999999999999 688999999999
Q ss_pred eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
.|++||+++++.+..+.. |...|.++.| ++.+|++|+.||.|++||+++++++..+.+|...+.++.+++
T Consensus 260 ~i~iwd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 329 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQG---HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 329 (445)
T ss_dssp CEEEEEGGGTEEEEEECC---CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET
T ss_pred EEEEEECCCCcEeEEecC---CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC
Confidence 999999999998888876 7789999999 788999999999999999999999999999999999998865
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=223.81 Aligned_cols=230 Identities=21% Similarity=0.356 Sum_probs=198.5
Q ss_pred CCceeee--ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 54 DDSTHIF--SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 54 ~~~~~~~--~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
.+.++.+ .+|...|++++|+| ++.+|++|+.||+|++|++.+++.+..+.+|...+.++.+ ++..+++++.++.+
T Consensus 55 g~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~ 131 (318)
T 4ggc_A 55 GDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHI 131 (318)
T ss_dssp CCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred CCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCce
Confidence 3444444 57888999999999 7889999999999999999999999999999998887666 56799999999999
Q ss_pred EEEcCCCC-ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE----EEeeecCCCCeEEEEEcCCCC-E
Q 022910 132 QIWDPSSG-NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGK-T 205 (290)
Q Consensus 132 ~i~d~~~~-~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ 205 (290)
++|+.... ..+..+.+|...+..+.+++++++|++++.||.|++||+++++. ......+...|.++.++|.+. .
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 99998876 45567788999999999999999999999999999999987653 344556788999999999654 3
Q ss_pred E--EEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCcEEEEEccCCCcE
Q 022910 206 I--CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS--KDGSVHMVNITTGKVVSSLVSHTDSI 281 (290)
Q Consensus 206 l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v 281 (290)
+ ++++.++.|++||........... +...+..+.|+|.+..+++++ .|+.|++||+++++++.++.+|.+.|
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V 287 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 287 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred EEEEecCCCCEEEEEeccccccccccc----ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 3 356678999999999888776665 567899999999988887654 79999999999999999999999999
Q ss_pred EEEEEecCC
Q 022910 282 ECIGFSRSE 290 (290)
Q Consensus 282 ~~i~~s~d~ 290 (290)
++++|+|+|
T Consensus 288 ~~l~~spdg 296 (318)
T 4ggc_A 288 LSLTMSPDG 296 (318)
T ss_dssp EEEEECTTS
T ss_pred EEEEEcCCC
Confidence 999999986
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.4e-33 Score=239.40 Aligned_cols=212 Identities=21% Similarity=0.384 Sum_probs=184.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee-------eeeeccccCCEEEEEECC-CCCEEEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-------ASEIQGHKDSVSSLAFSM-DGQLLASG 125 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~ 125 (290)
..+...+.+|...|++++|+|.+..+|++|+.||.|++|++..+.. ...+..|...|.+++|+| ++.+|+++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 5678889999999999999995555999999999999999987322 345668999999999999 67799999
Q ss_pred eCCCcEEEEcCCCC---ceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCc-ccEEEeeecCCCCeEEEEEc
Q 022910 126 GLDGLVQIWDPSSG---NLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFT 200 (290)
Q Consensus 126 ~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~ 200 (290)
+.+|.|++||++++ +.+..+..|...|++++|+|++. +|++|+.+|.|++||+++ ..++..+..|...|.+++|+
T Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC
Confidence 99999999999987 57778888999999999999887 789999999999999998 56788888899999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEcCCCC--------------eeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEE
Q 022910 201 PDGK-TICTGSDDATLRVWNPKSG--------------ENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVN 264 (290)
Q Consensus 201 ~~~~-~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd 264 (290)
|+++ +|++++.||.|++||+... +.+..+.+ |...|++++|+|+++ +|++++.||.|++|+
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC---CSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC---CCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9884 7899999999999999862 33344433 788999999999998 899999999999999
Q ss_pred cCCC
Q 022910 265 ITTG 268 (290)
Q Consensus 265 ~~~~ 268 (290)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 8653
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=229.14 Aligned_cols=213 Identities=17% Similarity=0.283 Sum_probs=188.5
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC------------------------
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD------------------------ 108 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------------------ 108 (290)
....+..+.+|...|.+++|+| ++.+|++++.||.|++|++.+++.+..+. +..
T Consensus 63 ~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 63 NGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTB
T ss_pred CchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCC
Confidence 4567888999999999999999 78899999999999999998776554432 222
Q ss_pred ------------------------------------CEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEEEEecCCCC
Q 022910 109 ------------------------------------SVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGPGGG 151 (290)
Q Consensus 109 ------------------------------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~ 151 (290)
.+.+++|+|++++|++++.+|.|++||+.+ .+.+..+..|...
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 677777777778888888889999999988 6778888889999
Q ss_pred EEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC--------------eEEE
Q 022910 152 VEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA--------------TLRV 217 (290)
Q Consensus 152 i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~i 217 (290)
|.+++|+|++++|++++.+|.|++||+++++.+..+. +...+.+++|+|+++++++++.++ .|++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEE
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEE
Confidence 9999999999999999999999999999999888887 778999999999999999999988 8999
Q ss_pred EcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 022910 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVV 271 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 271 (290)
||+.+++.+..+.. |...|++++|+|++++|++++.||.|++|++.++...
T Consensus 300 ~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 300 YHKIFEEEIGRVQG---HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred EecCCCcchhheec---ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 99999999888887 7889999999999999999999999999999876543
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=233.83 Aligned_cols=212 Identities=27% Similarity=0.349 Sum_probs=180.4
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCC---CCEEEEEeCCCcEEEEcCC
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMD---GQLLASGGLDGLVQIWDPS 137 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~ 137 (290)
.+|...|.+++|+|.++.+|++++.||.|++|++.+++....+. +...+.++.|+|. +.++++++.+|.|++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999777899999999999999999998888777 7788999999984 4499999999999999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCccc-EEEee---------------ecCCCCeEEEEEc
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAA-YLNMF---------------SGHGSSVTCGDFT 200 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~~ 200 (290)
+++.+..+..|...|.+++|+|+++ +|++++.+|.|++||+++.. .+..+ ..|...|.+++|+
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 9999999999999999999999998 59999999999999998765 33333 5688899999999
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCee-----------------------------------------------eEEEeCCC
Q 022910 201 PDGKTICTGSDDATLRVWNPKSGEN-----------------------------------------------IHVIRGHP 233 (290)
Q Consensus 201 ~~~~~l~~~~~dg~i~i~d~~~~~~-----------------------------------------------~~~~~~~~ 233 (290)
|++++|++++.||.|++||+.+++. +..+.
T Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--- 331 (408)
T 4a11_B 255 SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK--- 331 (408)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC---
T ss_pred CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec---
Confidence 9999999999999999999886543 22223
Q ss_pred CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 234 YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 234 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
.|...|++++|+|++++|++|+.||.|++|++.+++++.....
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 3778999999999999999999999999999999988765543
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-33 Score=238.97 Aligned_cols=217 Identities=14% Similarity=0.138 Sum_probs=174.5
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC-----------------------------eeeeeec-cccCCE
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----------------------------DWASEIQ-GHKDSV 110 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-----------------------------~~~~~~~-~~~~~i 110 (290)
+.-...|.+++|+| ++.++|+++.|++|+ +...+ +....+. .|...|
T Consensus 12 ~~~~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V 88 (588)
T 2j04_A 12 KEFEDWKNNLTWAR-DGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP 88 (588)
T ss_dssp CCCSSSSCCEEECT-TSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred hHhhccEEEEEECC-CCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE
Confidence 34456788888888 778888888888885 33222 1111122 357889
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCC-----CEEEEEEcCCCCEEEEeeCCCeEEEEECCccc---
Q 022910 111 SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGG-----GVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--- 182 (290)
Q Consensus 111 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~--- 182 (290)
.+++|+|+|++||+++.||.|++|+... ++..+. |.. .+.+++|+|+|++|++|+.||+|++|++.++.
T Consensus 89 ~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 9999999999999999999999999644 566666 654 49999999999999999999999999999875
Q ss_pred ----EEEee----ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee---eEEEeCCCCcccCeEEEEEcCCCCEE
Q 022910 183 ----YLNMF----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN---IHVIRGHPYHTEGLTCLTISADSTLA 251 (290)
Q Consensus 183 ----~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l 251 (290)
.+..+ .+|...|.+++|+|+| +++++.|+.|++|++..+.. ...+... |...|.+++|+ +++|
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~--h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA--SRRKITDLKIV--DYKV 239 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC--CSSCCCCEEEE--TTEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc--ccCcEEEEEEE--CCEE
Confidence 35665 5677899999999999 88889999999999988774 2445321 67889999999 6899
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE--ecCC
Q 022910 252 LSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF--SRSE 290 (290)
Q Consensus 252 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~--s~d~ 290 (290)
|+++ ++.|++|++.+++......+|.+.|++++| +|++
T Consensus 240 ASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 240 VLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp EEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC
T ss_pred EEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC
Confidence 9887 699999999988875544489999999999 9885
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-32 Score=228.81 Aligned_cols=208 Identities=12% Similarity=0.116 Sum_probs=165.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEE-EEEeCCCcEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQ 132 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~ 132 (290)
..++..+.+|...|++++|+| ++.+|++|+.++ +++|++.+++...... ...+..+++.++++.+ ++++.+++|+
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp ----------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred cCCccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 445667789999999999999 778999888665 7899998876665443 2357788899888877 5677789999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCC-----------------------------------CEEEE--eeCCCeEEE
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRG-----------------------------------HIVLA--GSEDSTVWM 175 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~-----------------------------------~~l~~--~~~dg~i~i 175 (290)
+||+.+++.+..+. +...|.+++|+++. .++++ |+.+|.|++
T Consensus 85 iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 99999999988887 55678888887642 23444 578899999
Q ss_pred EECCccc---------------E-EEeeecCCCCeEEEEEcCCCCEEEEEeCCCe-EEEEcCCCCeeeEEEe-CCCCccc
Q 022910 176 WNADRAA---------------Y-LNMFSGHGSSVTCGDFTPDGKTICTGSDDAT-LRVWNPKSGENIHVIR-GHPYHTE 237 (290)
Q Consensus 176 ~d~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~-~~~~~~~ 237 (290)
||++++. + +..+.+|...|.+++|+|++++|++|+.||+ |++||+++++.+..+. +. |..
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~--h~~ 241 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL--DRA 241 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT--CCS
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CCC
Confidence 9998765 2 6778899999999999999999999999998 9999999999988887 32 678
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 022910 238 GLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 268 (290)
.|++++|+|++++|++++.|++|++||+..+
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999999999999999999999999999765
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=231.97 Aligned_cols=201 Identities=8% Similarity=0.037 Sum_probs=165.8
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEcc---------CCeeeeeec-cccCCEEEEEECC--CCCEEEEEeCCCcE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRIN---------QGDWASEIQ-GHKDSVSSLAFSM--DGQLLASGGLDGLV 131 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~---------~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i 131 (290)
...|.++.|+| . +++++.|++|++|+.. +++.+..+. .|..+|.+++|+| ++++|++++.||+|
T Consensus 76 ~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i 151 (343)
T 3lrv_A 76 TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTI 151 (343)
T ss_dssp EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCE
T ss_pred cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcE
Confidence 46778888888 3 8899999999999765 344343333 5678999999999 99999999999999
Q ss_pred EEEcCCCCceEEEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEE-Eeeec-CCCCeEEEEEcCCCCEEEE
Q 022910 132 QIWDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL-NMFSG-HGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 132 ~i~d~~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~ 208 (290)
++||+.+++....... +...+.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |..+|.+++|+|++.+|++
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 9999999998766643 4557999999999999999999999999999999877 77887 9999999999999999999
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCe--EEEEEcCCCCEEEEEeC-CCcEEEEEcCCCc
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGL--TCLTISADSTLALSGSK-DGSVHMVNITTGK 269 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~ 269 (290)
++ ++.|++||+++++.+..+.....+...+ .+++|+|++++|++++. ++.|++|++.+..
T Consensus 232 ~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 232 EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 99 5599999999987765554322222333 46999999999999998 9999999986543
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-33 Score=237.48 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=177.4
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC-----CEEEEEECCCCCEEEEEeCCCcEEEEcC
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD-----SVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (290)
+|...|.+++|+| ++.+||+++.||.|++|+... .+..+. |.. .|.+++|+|+|++||+|+.||+|+||++
T Consensus 83 ~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 5588999999999 888999999999999999654 555566 665 4999999999999999999999999999
Q ss_pred CCCce-------EEEE----ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE---EEee-ecCCCCeEEEEEcC
Q 022910 137 SSGNL-------KCTL----EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY---LNMF-SGHGSSVTCGDFTP 201 (290)
Q Consensus 137 ~~~~~-------~~~~----~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~-~~~~~~i~~~~~~~ 201 (290)
.++.. +.++ .+|...|.+++|+|++ +++++.|+.|++|++.++.. .+.+ .+|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 98863 5666 5567899999999999 88899999999999988773 3455 3688899999999
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEE--cCCCCEEEEEeCCCcEEEEEcCC------------
Q 022910 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI--SADSTLALSGSKDGSVHMVNITT------------ 267 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~~wd~~~------------ 267 (290)
+++|++++ ++.|++||+.+++......+ |...+..++| +|++..|++++.+|+ ++|....
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~g---h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~ 309 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTG---SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPY 309 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECS---CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHH
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcC---CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEE
Confidence 68899887 69999999998776433334 8899999999 999999999999999 9998742
Q ss_pred -----------CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 -----------GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 -----------~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+..+..+.+ ...|++++|||||
T Consensus 310 ~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG 342 (588)
T 2j04_A 310 LEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDG 342 (588)
T ss_dssp HHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTS
T ss_pred cCCEEEEEECCCCceeeecc-ceEEEEEEECCCC
Confidence 111122222 3459999999997
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=234.63 Aligned_cols=207 Identities=11% Similarity=0.067 Sum_probs=172.1
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC---------CCceEEEEe
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS---------SGNLKCTLE 146 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~---------~~~~~~~~~ 146 (290)
++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 66789999999999999999998888776 466788889888 9999999999999665 555455554
Q ss_pred -cCCCCEEEEEEcC--CCCEEEEeeCCCeEEEEECCcccEEEeee-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCC
Q 022910 147 -GPGGGVEWVSWHP--RGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (290)
Q Consensus 147 -~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 222 (290)
.|..+|.+++|+| ++++|++++.||.|++||+++++.+.... .+...+.+++|+|++.+|++|+.||.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 5667899999999 99999999999999999999998876664 3556899999999999999999999999999999
Q ss_pred Ceee-EEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc---CCCcEE--EEEEecCC
Q 022910 223 GENI-HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS---HTDSIE--CIGFSRSE 290 (290)
Q Consensus 223 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~v~--~i~~s~d~ 290 (290)
++.+ ..+.. .|...|++++|+|++.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|+|
T Consensus 202 ~~~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 202 PDQASSRFPV--DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp TTSCCEECCC--CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred CCCCccEEec--cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 9876 56654 2678999999999999999999 55999999999887665543 434444 69999986
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.2e-32 Score=220.65 Aligned_cols=175 Identities=14% Similarity=0.192 Sum_probs=142.4
Q ss_pred CCcEEEEEcc-CCeeeeeeccccCCEEEEEECC---CCCEEEEEeCCCcEEEEcCCCCceEEEEecCC---CCEEEEEEc
Q 022910 86 DDKGFFWRIN-QGDWASEIQGHKDSVSSLAFSM---DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG---GGVEWVSWH 158 (290)
Q Consensus 86 dg~i~iw~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~i~~~ 158 (290)
++.|++|++. .++.+..+..|...++.++|+| ++.+|++++.|++|+|||+.+++.+.++.+|. ..+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 7788888884 4777777777888888888888 66889999999999999999999999998654 367788999
Q ss_pred CCCCEE------------EEeeCCCeEEEEECCcccEEEee-----ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCC
Q 022910 159 PRGHIV------------LAGSEDSTVWMWNADRAAYLNMF-----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK 221 (290)
Q Consensus 159 ~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 221 (290)
|++.++ ++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECC
Confidence 999876 56778999999999999887665 3555555544444 7889999999999999999
Q ss_pred CCeeeEEEeCCCCcccC-eEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 222 SGENIHVIRGHPYHTEG-LTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
+++.+.++.+ |... +.+++|+|+|++|++|+.|++|++||+
T Consensus 314 tGk~l~tL~g---H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPP---VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECC---C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecC---CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999986 4444 456899999999999999999999995
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=249.88 Aligned_cols=214 Identities=19% Similarity=0.291 Sum_probs=187.6
Q ss_pred CCceeeeccCCcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCC--CCEEEEEeCC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLD 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d 128 (290)
......+.+|.++|++++|+|. ++.+|++|+.||.|++|++.+++ ....+..|...|++++|+|+ ++++++++.|
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 4567889999999999999983 27899999999999999999987 67778889999999999999 9999999999
Q ss_pred CcEEEEcCCCC--ceEEEEecCCCCEEEEEEcC-------------CCCEEEEeeCCCeEEEEECCcc----cEEEeeec
Q 022910 129 GLVQIWDPSSG--NLKCTLEGPGGGVEWVSWHP-------------RGHIVLAGSEDSTVWMWNADRA----AYLNMFSG 189 (290)
Q Consensus 129 g~i~i~d~~~~--~~~~~~~~~~~~i~~i~~~~-------------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~ 189 (290)
|.|++||+.++ .....+..|...|.+++|+| ++.+|++|+.||.|++||++++ .....+.+
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 99999999887 34456678889999999999 5899999999999999999876 56677888
Q ss_pred CCCCeEEEEEcCC---CCEEEEEeCCCeEEEEcCCCCeee--EEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 190 HGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENI--HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 190 ~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
|..+|.+++|+|+ +.+|++++.||.|++||++++... ..+.....+...|++++|+|++++|++|+.||.|++|+
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 9999999999999 899999999999999999886421 12222233778899999999999999999999999999
Q ss_pred cCC
Q 022910 265 ITT 267 (290)
Q Consensus 265 ~~~ 267 (290)
+.+
T Consensus 283 ~~~ 285 (753)
T 3jro_A 283 ENL 285 (753)
T ss_dssp CCS
T ss_pred cCC
Confidence 985
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.3e-31 Score=226.54 Aligned_cols=229 Identities=22% Similarity=0.379 Sum_probs=186.6
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC-eeeeeeccccCCEEEEEECCCCCEEEEEeCCCcE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (290)
..+.++.+.+|...|.+++|++ .+|++|+.|+.+++|+.... ..+..+.+|...+..+.|+|+++++++++.|+.+
T Consensus 178 ~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v 254 (420)
T 4gga_A 178 QQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 254 (420)
T ss_dssp TTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccc
Confidence 3567888999999999999865 68999999999999998864 4567788999999999999999999999999999
Q ss_pred EEEcCCCCc----eEEEEecCCCCEEEEEEcCCCC-EEEE--eeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCC
Q 022910 132 QIWDPSSGN----LKCTLEGPGGGVEWVSWHPRGH-IVLA--GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 132 ~i~d~~~~~----~~~~~~~~~~~i~~i~~~~~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
++|+..+++ .+.....|...|.+++|+|.+. ++++ |+.|+.|++||+++++....+..+ ..+.++.|+|+++
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~ 333 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYK 333 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTT
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCC
Confidence 999998765 3456677889999999999654 5554 457999999999999988888754 6788999999999
Q ss_pred EEEEEe--CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEE
Q 022910 205 TICTGS--DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIE 282 (290)
Q Consensus 205 ~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 282 (290)
.+++++ .|+.|+|||+.+++++..+.+ |...|++++|+|+|++|++|+.|++|++||+....+.+....+...+.
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~g---H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 988765 689999999999999999987 788999999999999999999999999999988777666666655554
Q ss_pred EEEEec
Q 022910 283 CIGFSR 288 (290)
Q Consensus 283 ~i~~s~ 288 (290)
...|..
T Consensus 411 ~~s~~~ 416 (420)
T 4gga_A 411 KSSLIH 416 (420)
T ss_dssp ------
T ss_pred ccccCC
Confidence 444433
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2e-30 Score=218.36 Aligned_cols=228 Identities=16% Similarity=0.173 Sum_probs=194.0
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQ 132 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~ 132 (290)
.+.+..+.+|. .+.+++|+|++..++++++.++.|++||+.+++.+..+..+. .+.+++|+|++++|+++ +.++.|+
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEE
Confidence 34566667665 589999999555566888899999999999999888887554 89999999999987554 5679999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEE-EEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEE-EEEe
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CTGS 210 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~ 210 (290)
+||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++
T Consensus 100 v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 100 VIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEET
T ss_pred EEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeC
Confidence 9999999988887755 468999999999977 67888999999999999988888755 567999999999887 5677
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe---CCCcEEEEEcCCCcEEEEEccCCCcEEEEEEe
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS---KDGSVHMVNITTGKVVSSLVSHTDSIECIGFS 287 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s 287 (290)
.++.|++||+++++....+. +...+.+++|+|++++|++++ .++.|++||+.+++.+..+..|. .+.+++|+
T Consensus 178 ~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s 252 (391)
T 1l0q_A 178 DSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVT 252 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEc
Confidence 89999999999998877776 456789999999999999888 68999999999999999998765 58999999
Q ss_pred cCC
Q 022910 288 RSE 290 (290)
Q Consensus 288 ~d~ 290 (290)
|+|
T Consensus 253 ~dg 255 (391)
T 1l0q_A 253 PDG 255 (391)
T ss_dssp TTS
T ss_pred cCC
Confidence 986
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=252.44 Aligned_cols=222 Identities=13% Similarity=0.162 Sum_probs=180.6
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeee--eee----c-----cccCCEEEEEECCCCCEEEEEeC
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEI----Q-----GHKDSVSSLAFSMDGQLLASGGL 127 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~----~-----~~~~~i~~~~~~~~~~~l~~~~~ 127 (290)
.+.||...+.+++|+| ++.+|++|+.|++|++||+.++... ..+ . +|...|.+++|+|++++||+|+.
T Consensus 430 ~l~G~~~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp SCCCSBCCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred cccCCcCCCCcccccc-cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 4567777777778888 8889999999999999999876422 111 1 78899999999999999999999
Q ss_pred CCcEEEEcCCCCc---------------------------------------------eEEEEecCCCCEEEEEEcCCCC
Q 022910 128 DGLVQIWDPSSGN---------------------------------------------LKCTLEGPGGGVEWVSWHPRGH 162 (290)
Q Consensus 128 dg~i~i~d~~~~~---------------------------------------------~~~~~~~~~~~i~~i~~~~~~~ 162 (290)
||+|+||++.+++ ++..+.+|.+.|++++|+|+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 9999999997662 356778899999999999999
Q ss_pred EEEEeeCCCeEEEEECCcccEEE-----eee-cCCCCeEEEEEc-----CCC---CEEEEEeCCCeEEEEcC---CCCee
Q 022910 163 IVLAGSEDSTVWMWNADRAAYLN-----MFS-GHGSSVTCGDFT-----PDG---KTICTGSDDATLRVWNP---KSGEN 225 (290)
Q Consensus 163 ~l~~~~~dg~i~i~d~~~~~~~~-----~~~-~~~~~i~~~~~~-----~~~---~~l~~~~~dg~i~i~d~---~~~~~ 225 (290)
+||+|+.|++|++||+++...+. .+. +|...|++++|+ |+| .+|++|+.|++|++||+ .+++.
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcE
Confidence 99999999999999998876653 233 788999999999 885 89999999999999999 77777
Q ss_pred eEEEeCCCC--cccCeEEEE-Ec----------------------CCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCc
Q 022910 226 IHVIRGHPY--HTEGLTCLT-IS----------------------ADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDS 280 (290)
Q Consensus 226 ~~~~~~~~~--~~~~v~~~~-~~----------------------~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 280 (290)
...+.++.. +...|..++ |+ +++.+|+++ +..|++|++.+++++++...|...
T Consensus 668 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~~~~~~ 745 (902)
T 2oaj_A 668 DVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGFKYPLA 745 (902)
T ss_dssp EEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEECSSCEE
T ss_pred EEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeEccccee
Confidence 777765421 245666665 55 445444444 779999999999999888777666
Q ss_pred EEEE
Q 022910 281 IECI 284 (290)
Q Consensus 281 v~~i 284 (290)
+.++
T Consensus 746 ~~~v 749 (902)
T 2oaj_A 746 ATGL 749 (902)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 6665
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=221.86 Aligned_cols=204 Identities=17% Similarity=0.219 Sum_probs=173.0
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEE--CCCCCEEEEEeCCCcEEEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAF--SMDGQLLASGGLDGLVQIW 134 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~ 134 (290)
...+.+|...|++++|+| ++.+|++++.||.|++|++.+++.+. +..|...|.+++| +|++++|++++.||.|++|
T Consensus 79 ~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred EEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 378899999999999999 88899999999999999999988776 4559999999999 8999999999999999999
Q ss_pred cCCCCceEEEEecCC-----------------------------------------CCEEEEEEcCCCCE----EEEeeC
Q 022910 135 DPSSGNLKCTLEGPG-----------------------------------------GGVEWVSWHPRGHI----VLAGSE 169 (290)
Q Consensus 135 d~~~~~~~~~~~~~~-----------------------------------------~~i~~i~~~~~~~~----l~~~~~ 169 (290)
|+.+++.+..+..+. ..+.++.+.+.... +++++.
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp CSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred ECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 999888776665433 22344444443333 999999
Q ss_pred CCeEEEEECCcc---cEEEeeecCCC------------CeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC
Q 022910 170 DSTVWMWNADRA---AYLNMFSGHGS------------SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY 234 (290)
Q Consensus 170 dg~i~i~d~~~~---~~~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 234 (290)
+|.|++|+++.. ..+..+..|.. +|.+++|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--- 313 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ--- 313 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC---
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC---
Confidence 999999999877 45666666665 799999999999999999999999999999998888776
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
|...|++++|+|++++|++++.|+..+.|++
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CCCCceEEEECCCCCeEEEEecccccccccc
Confidence 7889999999999999999999886555544
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.5e-30 Score=219.68 Aligned_cols=224 Identities=9% Similarity=0.051 Sum_probs=195.6
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEE-EeCCCcEEEEcCC
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLAS-GGLDGLVQIWDPS 137 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~ 137 (290)
.+.+|.+.|.+++|+| ++.++++++.++.|++|++.+++.+..+..|...+.+++|+|+++++++ ++.++.|++||+.
T Consensus 164 ~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 164 KYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 4568999999999988 8889999999999999999999999888889999999999999998754 4579999999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEee--------CCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEE-EE
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS--------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CT 208 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~ 208 (290)
+++.+..+..+ ..+.+++|+|++++|++++ .+|.|++||+++++.+..+. +...+.+++|+|+++.+ ++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEE
Confidence 99888777754 4599999999999999988 48899999999988776653 55688999999999755 56
Q ss_pred EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC---------------CCcEEEEEcCCCcEEEE
Q 022910 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK---------------DGSVHMVNITTGKVVSS 273 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~~wd~~~~~~~~~ 273 (290)
++.++.|++||+.+++....+. +...+.+++|+|++++|++++. ||.|++||+.+++.+..
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIP----VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCcEEEEec----CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 6889999999999998887776 5677999999999999888876 57999999999999998
Q ss_pred EccCCCcEEEEEEecCC
Q 022910 274 LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 274 ~~~~~~~v~~i~~s~d~ 290 (290)
+.. ...+.+++|+|+|
T Consensus 397 ~~~-~~~~~~~~~s~dg 412 (433)
T 3bws_A 397 WEA-GNQPTGLDVSPDN 412 (433)
T ss_dssp EEC-SSSEEEEEECTTS
T ss_pred ecC-CCCCceEEEcCCC
Confidence 886 4679999999986
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7.4e-32 Score=227.59 Aligned_cols=206 Identities=15% Similarity=0.114 Sum_probs=155.0
Q ss_pred ceeeeccCCcCEEEEEECC-------CCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCC-EEEEEeC
Q 022910 56 STHIFSGHSDEVYSVACSP-------TDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGL 127 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~-------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 127 (290)
.+..+.||.+.|++++|+| .++++||+|+.|++|+|||+.++..+..+..|..+|.+++|+|++. +|++++.
T Consensus 128 ~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 207 (393)
T 4gq1_A 128 VLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER 207 (393)
T ss_dssp EECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET
T ss_pred eecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC
Confidence 3445789999999999987 2568999999999999999999888888888999999999999875 7999999
Q ss_pred CCcEEEEcCCCCceEEE-------------------------EecCCCCEEEEEEc-CCCCEEEEeeCCCeEEEEECCcc
Q 022910 128 DGLVQIWDPSSGNLKCT-------------------------LEGPGGGVEWVSWH-PRGHIVLAGSEDSTVWMWNADRA 181 (290)
Q Consensus 128 dg~i~i~d~~~~~~~~~-------------------------~~~~~~~i~~i~~~-~~~~~l~~~~~dg~i~i~d~~~~ 181 (290)
||+|++||+.+++.... ..+|...+.++.|+ |+++.|++++.|+.+++||+..+
T Consensus 208 d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 208 NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 99999999988754332 13456678888886 79999999999999999999887
Q ss_pred cEEEeeecCCCCeEEE------------------EEcC--CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEE
Q 022910 182 AYLNMFSGHGSSVTCG------------------DFTP--DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTC 241 (290)
Q Consensus 182 ~~~~~~~~~~~~i~~~------------------~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 241 (290)
+....+..+...+..+ .|+| ++.++++|+.||.|++||+.+++....+.. |..+|.+
T Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---~~~~V~s 364 (393)
T 4gq1_A 288 NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---LGMPIVD 364 (393)
T ss_dssp ----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE---CSSCEEE
T ss_pred CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC---CCCcEEE
Confidence 6655554444333333 3333 334567788899999999999988777665 6789999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 242 LTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
++|+|+|++||+++.+| +.+|.+
T Consensus 365 vafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 365 FCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEcCCCCEEEEEeCCC-eEEEEE
Confidence 99999999999998766 556654
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4e-30 Score=219.31 Aligned_cols=228 Identities=14% Similarity=0.087 Sum_probs=196.6
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee-----eeccccCCEEEEEECCCCCEEEEEeCCC
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-----EIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (290)
..+..+..+. .+.+++|+| ++.++++++.++.|++||+.+++... .+.+|...|.+++|+|+++++++++.++
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp EEEEEEECSS-CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred eEEEEEcCCC-CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC
Confidence 3444455444 456999999 88999999999999999999988776 4457888999999999999999999999
Q ss_pred cEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEE-eeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE
Q 022910 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLA-GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 208 (290)
.|++||+.+++.+..+..+...+.+++|+|+++++++ ++.++.|++||+++++.+..+.. ...+.+++|+|++++|++
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEE
Confidence 9999999999999999888889999999999998855 44799999999999988887775 456899999999999998
Q ss_pred Ee--------CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCcEEEEEccCCC
Q 022910 209 GS--------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTL-ALSGSKDGSVHMVNITTGKVVSSLVSHTD 279 (290)
Q Consensus 209 ~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 279 (290)
++ .||.|++||+.+++....+. +...+.+++|+|+++. +++++.++.|++||+.+++.+..+. +..
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~ 345 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIG----PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFD 345 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEE----EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSS
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeecc----CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCC
Confidence 87 58899999999998777664 5668899999999975 4666889999999999999888886 577
Q ss_pred cEEEEEEecCC
Q 022910 280 SIECIGFSRSE 290 (290)
Q Consensus 280 ~v~~i~~s~d~ 290 (290)
.+.+++|+|+|
T Consensus 346 ~~~~~~~s~dg 356 (433)
T 3bws_A 346 KPNTIALSPDG 356 (433)
T ss_dssp SEEEEEECTTS
T ss_pred CCCeEEEcCCC
Confidence 89999999986
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-28 Score=205.98 Aligned_cols=219 Identities=13% Similarity=0.135 Sum_probs=184.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEE-EEEeCCCcEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQ 132 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~ 132 (290)
.+.+..+..|. .+.+++|+|++..++++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|+
T Consensus 64 ~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 64 NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 34455555555 99999999955556667778899999999999988877744 568999999999977 6778899999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEE-EEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe-
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS- 210 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~- 210 (290)
+||+.+++.+..+..+. .+.+++|+|++++| ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++
T Consensus 142 ~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 142 VINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEec
Confidence 99999999888887654 57999999999877 567788999999999998887776 456889999999999999887
Q ss_pred --CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEEccCCCc
Q 022910 211 --DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKVVSSLVSHTDS 280 (290)
Q Consensus 211 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 280 (290)
.++.|++||+.+++.+..+.. ...+.+++|+|++++| ++++.|+.|++||+.+++++..+..|..+
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred CcCCCcEEEEECCCCeEEEEEec----CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 689999999999988888775 2357899999999877 56688999999999999999999877654
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.8e-29 Score=212.37 Aligned_cols=227 Identities=18% Similarity=0.211 Sum_probs=187.3
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCC---cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEE-EEeCC
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDD---KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLD 128 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d 128 (290)
.....+.+.+|...|.+++|+| ++..|++++.++ .|++||+.+++.. .+..|...+.+++|+|++++|+ +++.+
T Consensus 167 ~g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 167 DGYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp TSCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred CCCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 3456788889999999999999 777788887775 9999999988765 4666888999999999999888 56655
Q ss_pred Cc--EEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeC-CC--eEEEEECCcccEEEeeecCCCCeEEEEEcCCC
Q 022910 129 GL--VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DS--TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 129 g~--i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
+. |++||+.+++. ..+..+...+.+++|+|++++|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|
T Consensus 245 g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG 322 (415)
T 2hqs_A 245 GSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDG 322 (415)
T ss_dssp SSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTS
T ss_pred CCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCC
Confidence 54 99999998876 566677788999999999999988876 44 788889988764 4455567789999999999
Q ss_pred CEEEEEeCC---CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCcEEEEEccC
Q 022910 204 KTICTGSDD---ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG---SVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 204 ~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~wd~~~~~~~~~~~~~ 277 (290)
++|++++.+ ..|++||+.+++.. .+.. + ..+.+++|+|+|++|++++.++ .|++||+. ++....+..|
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~---~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~ 396 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS---T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPAT 396 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCCEE-ECCC---S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCS
T ss_pred CEEEEEECcCCceEEEEEECCCCCEE-EecC---C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCC
Confidence 999887764 58999999988763 3433 3 2789999999999999988877 79999986 6667889999
Q ss_pred CCcEEEEEEecC
Q 022910 278 TDSIECIGFSRS 289 (290)
Q Consensus 278 ~~~v~~i~~s~d 289 (290)
.+.|++++|+|-
T Consensus 397 ~~~v~~~~~~~~ 408 (415)
T 2hqs_A 397 DGQVKFPAWSPY 408 (415)
T ss_dssp SSEEEEEEECCC
T ss_pred CCCCcCCccccc
Confidence 999999999985
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.4e-28 Score=200.94 Aligned_cols=231 Identities=21% Similarity=0.351 Sum_probs=190.3
Q ss_pred CCCCCceeeecc--CCc--CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec--cccCCEEEEEECCCCCEEEE
Q 022910 51 EQPDDSTHIFSG--HSD--EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSMDGQLLAS 124 (290)
Q Consensus 51 ~~~~~~~~~~~~--h~~--~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~ 124 (290)
..|..|.+.|.+ ..+ .+++|+|++ ++ +||+|. |++|+|||+.+++.+..+. .|...|++++|+|++++|++
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 456667777753 333 257899998 44 777764 8999999999998877654 67788999999999999999
Q ss_pred EeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-cEEEeeecCCCCeEEEEEcCCC
Q 022910 125 GGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
|+.||+|++|++.+++.+..+.+|...+.++.+ .+..+++++.++.+++|+.... ..+..+.+|...+..+.+++++
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 999999999999999999999999988877655 5679999999999999998875 4567788899999999999999
Q ss_pred CEEEEEeCCCeEEEEcCCCCeee----EEEeCCCCcccCeEEEEEcCCCCE---EEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 204 KTICTGSDDATLRVWNPKSGENI----HVIRGHPYHTEGLTCLTISADSTL---ALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
++|++++.||.|++||+++++.. ..... +...|.++.++|.+.. +++++.++.|++|+...........
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~- 238 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ---HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD- 238 (318)
T ss_dssp SEEEEEETTSCEEEEESSCBTTBSCCSEEECC---CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-
T ss_pred CEEEEEecCcceeEEECCCCcccccceeeecc---cCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-
Confidence 99999999999999999876532 22222 6778999999996543 3456778999999999888777655
Q ss_pred CCCcEEEEEEecCC
Q 022910 277 HTDSIECIGFSRSE 290 (290)
Q Consensus 277 ~~~~v~~i~~s~d~ 290 (290)
+...+..+.|+|++
T Consensus 239 ~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 239 AHSQVCSILWSPHY 252 (318)
T ss_dssp CSSCEEEEEEETTT
T ss_pred ceeeeeeeeecccc
Confidence 56789999998864
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.1e-29 Score=202.30 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=169.1
Q ss_pred CCceeeeccCCc----CEEEEEECCCCC--cEEEEecCCCcEEEEEccCC---eeeeeeccccC----------------
Q 022910 54 DDSTHIFSGHSD----EVYSVACSPTDA--TLVATGGGDDKGFFWRINQG---DWASEIQGHKD---------------- 108 (290)
Q Consensus 54 ~~~~~~~~~h~~----~v~~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~---------------- 108 (290)
.+.+..|+...+ .+.++.|-..+. ..+++++ ...|++|+...+ +.+.++..|..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 25 LQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceee
Confidence 344555555544 355666655332 2555665 579999999987 66676665554
Q ss_pred ---------CEEEEEECCC----CCEEEEEeC--------------------CCcEEEEcC-CCCceEEEEecCCCCEEE
Q 022910 109 ---------SVSSLAFSMD----GQLLASGGL--------------------DGLVQIWDP-SSGNLKCTLEGPGGGVEW 154 (290)
Q Consensus 109 ---------~i~~~~~~~~----~~~l~~~~~--------------------dg~i~i~d~-~~~~~~~~~~~~~~~i~~ 154 (290)
.|+.++|+|+ ++++++++. |+.|++|++ .+++.+..+..|...++.
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~ 183 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETI 183 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCE
T ss_pred eeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceee
Confidence 4566777778 777776553 788888888 447777777788888888
Q ss_pred EEEcC---CCCEEEEeeCCCeEEEEECCcccEEEeeecCC---CCeEEEEEcCCCCEE------------EEEeCCCeEE
Q 022910 155 VSWHP---RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG---SSVTCGDFTPDGKTI------------CTGSDDATLR 216 (290)
Q Consensus 155 i~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~~~~~dg~i~ 216 (290)
++|++ ++.+|++++.|++|+|||++++++++++.+|. ..+.+++|+|+|.++ ++|+.|++|+
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 88888 67899999999999999999999999998654 367788999999876 5678899999
Q ss_pred EEcCCCCeeeEEEeC--CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEE-EEEEecCC
Q 022910 217 VWNPKSGENIHVIRG--HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIE-CIGFSRSE 290 (290)
Q Consensus 217 i~d~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~-~i~~s~d~ 290 (290)
+||..+++.+..+.. ...|...+.+..+ ++.++++|+.|++|+|||+.+++++.++.+|...+. +++|||||
T Consensus 264 lWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 264 VINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred EEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 999999988765521 1124444444444 478999999999999999999999999999987655 68999996
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=8.7e-29 Score=206.01 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=163.8
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCC-------------------------
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDG------------------------- 119 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------- 119 (290)
..+..+++.+....++++++.+++|++||+.+++.+..+. +...|.+++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 137 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDI 137 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCE
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEec
Confidence 3577888888555555778888999999999999888887 66788988887642
Q ss_pred ----------CEEEE--EeCCCcEEEEcCCCCc----------------eEEEEecCCCCEEEEEEcCCCCEEEEeeCCC
Q 022910 120 ----------QLLAS--GGLDGLVQIWDPSSGN----------------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS 171 (290)
Q Consensus 120 ----------~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg 171 (290)
.++++ |+.+|.|++||+.+++ .+..+.+|..+|++++|+|++++|++|+.||
T Consensus 138 ~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 138 RFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp EEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred cCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCC
Confidence 23444 5778999999998765 2677889999999999999999999999999
Q ss_pred e-EEEEECCcccEEEeee-c-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee--eEEEe----------------
Q 022910 172 T-VWMWNADRAAYLNMFS-G-HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN--IHVIR---------------- 230 (290)
Q Consensus 172 ~-i~i~d~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---------------- 230 (290)
+ |++||+++++.+..+. + |...|.+++|+|++++|++++.|+.|++||++.+.. ...+.
T Consensus 218 ~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (355)
T 3vu4_A 218 TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCN 297 (355)
T ss_dssp SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEE
T ss_pred CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeE
Confidence 8 9999999999999998 5 999999999999999999999999999999976532 11111
Q ss_pred --CCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 231 --GHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 231 --~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
...........++|++++++|++++.||.+++|++..
T Consensus 298 ~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 298 FKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 0111122346789999999999999999999999764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.4e-27 Score=202.69 Aligned_cols=224 Identities=15% Similarity=0.089 Sum_probs=176.5
Q ss_pred eeeccCCcCEEEEEECCC-------------CCcEEEEecCC------CcEEEEEccCCeeeeeeccccCCEEEEEECCC
Q 022910 58 HIFSGHSDEVYSVACSPT-------------DATLVATGGGD------DKGFFWRINQGDWASEIQGHKDSVSSLAFSMD 118 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~-------------~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~ 118 (290)
..+.+|...+..+++++. .+..++.++.+ +.|++||+.. .....+..|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 457778777777766541 03344444333 7999999974 456677779999999999999
Q ss_pred CCEEEEEeCCC---cEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEE-EeeCCC--eEEEEECCcccEEEeeecCCC
Q 022910 119 GQLLASGGLDG---LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDS--TVWMWNADRAAYLNMFSGHGS 192 (290)
Q Consensus 119 ~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~ 192 (290)
+++|++++.++ .|++||+.+++.. .+..+...+.+++|+|++++|+ +++.++ .|++||+.+++. ..+..+..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC
Confidence 99999999875 9999999998875 4566777899999999999888 555555 499999998875 56667888
Q ss_pred CeEEEEEcCCCCEEEEEeC-CC--eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC---CcEEEEEcC
Q 022910 193 SVTCGDFTPDGKTICTGSD-DA--TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD---GSVHMVNIT 266 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~wd~~ 266 (290)
.+.+++|+|+|++|++++. ++ .|++||+.+++. ..+.. +...+..++|+|+|++|++++.+ +.|++||+.
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITW---EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCC---SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEec---CCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 9999999999999988876 44 788889988764 33332 45678899999999999988764 589999999
Q ss_pred CCcEEEEEccCCCcEEEEEEecCC
Q 022910 267 TGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+++. ..+..+. .+.+++|+|||
T Consensus 344 ~~~~-~~l~~~~-~~~~~~~spdg 365 (415)
T 2hqs_A 344 TGGV-QVLSSTF-LDETPSLAPNG 365 (415)
T ss_dssp TCCE-EECCCSS-SCEEEEECTTS
T ss_pred CCCE-EEecCCC-CcCCeEEcCCC
Confidence 8887 4566554 89999999986
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=2.8e-27 Score=190.85 Aligned_cols=230 Identities=15% Similarity=0.208 Sum_probs=177.2
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC-Ceeeeeeccc-cCCEEEEEECCCCCEEEEEeC--C-
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH-KDSVSSLAFSMDGQLLASGGL--D- 128 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~--d- 128 (290)
......+..|...|.+++|+| ++.+|++++ ++.|++|++.+ ++.......+ ...+.+++|+|++++|++++. +
T Consensus 31 ~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 108 (297)
T 2ojh_A 31 TRKMRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG 108 (297)
T ss_dssp TTEEEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS
T ss_pred CCceeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC
Confidence 344556778999999999999 677777776 78999999998 7777666555 367899999999999999983 3
Q ss_pred -CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEE-EeeCCCeEEEEECCc-ccEEEeeecCCCCeEEEEEcCCCCE
Q 022910 129 -GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 129 -g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (290)
..|.+|++.+++ ...+..+. .+..++|+|++++|+ ++..++.+++|++.. ......+..+...+.+++|+|++++
T Consensus 109 ~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 109 KSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp SCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSE
T ss_pred cceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCE
Confidence 345555555555 33444333 489999999999877 677889999998532 2334556667788999999999998
Q ss_pred EEEEe-CCCeEEEEcCC-CCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----------CcEEEEEcCCCcE--
Q 022910 206 ICTGS-DDATLRVWNPK-SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----------GSVHMVNITTGKV-- 270 (290)
Q Consensus 206 l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~~wd~~~~~~-- 270 (290)
|++++ .++.+++|++. .+.....+.. +...+..++|+|++++|++++.+ +.|++||+.+++.
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITD---SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCC---CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEec---CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 88766 58899999876 4445555554 55678999999999999888765 5699999988765
Q ss_pred EEEEccCCCcEEEEEEecCC
Q 022910 271 VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 271 ~~~~~~~~~~v~~i~~s~d~ 290 (290)
+..+.+|...|.+++|+|+|
T Consensus 264 ~~~~~~~~~~~~~~~~spdg 283 (297)
T 2ojh_A 264 LFDLFGGQGTMNSPNWSPDG 283 (297)
T ss_dssp EEEEEESTTTSCSCCBCTTS
T ss_pred eeccCCCCcccccceECCCC
Confidence 45555788899999999986
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1.2e-24 Score=180.24 Aligned_cols=229 Identities=10% Similarity=0.088 Sum_probs=185.7
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCC---------EEEEEECCCCCEEEEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------VSSLAFSMDGQLLASG 125 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~ 125 (290)
+.+..+.. ...+.+++|+|+++.+++++..++.|.+||..+++.+..+..+... +.+++|+|++++++++
T Consensus 80 ~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 158 (353)
T 3vgz_A 80 EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYIS 158 (353)
T ss_dssp CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEE
T ss_pred eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEE
Confidence 33444443 3457789999955557777787899999999999888777654322 7899999999987777
Q ss_pred e--CCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeec----CCCCeEEEEE
Q 022910 126 G--LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG----HGSSVTCGDF 199 (290)
Q Consensus 126 ~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~ 199 (290)
+ .++.|.+||+.+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+.. +...+..++|
T Consensus 159 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 159 GIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred ecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 6 478899999999998888875566688999999999999999999999999999988877664 4556888999
Q ss_pred cCCCCEEEEEeC-CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEEccC
Q 022910 200 TPDGKTICTGSD-DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 200 ~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
+|+++++++++. ++.|.+||+.+++.+..+... . ...++|+|+++++++++ .++.|.+||+.+++.+..+...
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP---E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP 313 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS---S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC---C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC
Confidence 999998776665 599999999999988777742 1 25689999999666555 6899999999999999888764
Q ss_pred CCcEEEEEEecCC
Q 022910 278 TDSIECIGFSRSE 290 (290)
Q Consensus 278 ~~~v~~i~~s~d~ 290 (290)
..+.+++|+|+|
T Consensus 314 -~~~~~~~~s~dg 325 (353)
T 3vgz_A 314 -THPNSLALSADG 325 (353)
T ss_dssp -SEEEEEEECTTS
T ss_pred -CCCCeEEEcCCC
Confidence 578999999986
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.4e-24 Score=189.82 Aligned_cols=232 Identities=13% Similarity=0.079 Sum_probs=184.8
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEc--cCCeeeeeeccccCCEEEEEECC----CCCEEEEEeC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRI--NQGDWASEIQGHKDSVSSLAFSM----DGQLLASGGL 127 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~--~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~ 127 (290)
.+.+..+..+.. +.+++|+| ++++|++++.++.|++||+ .+++.+..+. +...+..++|+| +++++++++.
T Consensus 169 ~~~~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 169 KKIVKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp CCEEEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred ceEEEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 455666663333 89999999 7788888889999999999 8888888887 455679999999 9999999874
Q ss_pred -CCcEEEEcCCCCceEEEEecC-----------CCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEE--eeecCCC
Q 022910 128 -DGLVQIWDPSSGNLKCTLEGP-----------GGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN--MFSGHGS 192 (290)
Q Consensus 128 -dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~ 192 (290)
+++|.+||..+++++..+..+ ...+..+.++|++. ++++...++.|.+||+.+.+.+. .+. +..
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~ 324 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAP 324 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCS
T ss_pred cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCc
Confidence 899999999999998887642 23688999999766 55566778999999998765433 333 566
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCeEEEEcCCCCeeeEEEeCCC-CcccCeEEEEEcCC-CCEEEEEe-CCCcEEEEEcCC-
Q 022910 193 SVTCGDFTPDGKTICTGS-DDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISAD-STLALSGS-KDGSVHMVNITT- 267 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~-~dg~i~~wd~~~- 267 (290)
.+..+.|+|++++|++++ .+++|.+||+.+++++..+.... .|......+ ++|+ +.+++++. .+++|.+|++.+
T Consensus 325 ~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp SCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 788899999999877654 58899999999999888876422 133333333 4676 66677765 589999999998
Q ss_pred ------CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 ------GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 ------~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+++++++..|.+.+..|+|||+|
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg 432 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKS 432 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTC
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCC
Confidence 89999999999999999999986
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=1.7e-26 Score=196.93 Aligned_cols=202 Identities=19% Similarity=0.229 Sum_probs=157.9
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe----------eeee-----eccccCCEEEEEECCCCCEEE----E
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD----------WASE-----IQGHKDSVSSLAFSMDGQLLA----S 124 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----------~~~~-----~~~~~~~i~~~~~~~~~~~l~----~ 124 (290)
...++.+++++ .+.++++++.++ +++|+..... .... ...+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 34678999999 666777888777 8898764211 0100 112556799999999999999 7
Q ss_pred EeCCCcEEEEcCCCC--------ce---EEEEecCCCCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeecCCC
Q 022910 125 GGLDGLVQIWDPSSG--------NL---KCTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS 192 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~--------~~---~~~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 192 (290)
++.|+.|+|||+.++ +. +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 888999999998654 22 3455668889999999998 78999999999999999999877767777889
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC----cccCeEEEEEcCCCCEEEEE-eCCC------cEE
Q 022910 193 SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY----HTEGLTCLTISADSTLALSG-SKDG------SVH 261 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~-~~dg------~i~ 261 (290)
.|.+++|+|+|++|++|+.||.|++||++ ++....+..+.. |...+.+++|++++.++++. +.+| .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 99999999999999999999999999998 555555554321 23479999999988877553 3443 389
Q ss_pred EEEcCCC
Q 022910 262 MVNITTG 268 (290)
Q Consensus 262 ~wd~~~~ 268 (290)
+|++++.
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999864
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=4.6e-24 Score=176.76 Aligned_cols=225 Identities=12% Similarity=0.121 Sum_probs=180.7
Q ss_pred CCcCEEEEEECCCCCcEEEEecC------CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEc
Q 022910 63 HSDEVYSVACSPTDATLVATGGG------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWD 135 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d 135 (290)
....+..++|+|+++.++++... ++.|.+||..+++.+..+.. ...+..++|+|++++++++ ..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 44578899999944444444432 56899999999988887763 3457889999999965554 5579999999
Q ss_pred CCCCceEEEEecCCCC---------EEEEEEcCCCCEEEEee--CCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCC
Q 022910 136 PSSGNLKCTLEGPGGG---------VEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~---------i~~i~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+.+++|+|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 9999988888764432 78899999999887776 478999999999998888875666788999999999
Q ss_pred EEEEEeCCCeEEEEcCCCCeeeEEEeCCC-CcccCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCcEEEEEccCCCcEE
Q 022910 205 TICTGSDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSK-DGSVHMVNITTGKVVSSLVSHTDSIE 282 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~~~v~ 282 (290)
+|++++.++.|.+||+.+++....+.... .+...+..++|+|++++|++++. ++.|.+||+.+++.+..+.... ..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SL 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--Cc
Confidence 99999999999999999998887776422 13556888999999997777665 4899999999999998887643 26
Q ss_pred EEEEecCC
Q 022910 283 CIGFSRSE 290 (290)
Q Consensus 283 ~i~~s~d~ 290 (290)
+++|+|+|
T Consensus 276 ~~~~s~dg 283 (353)
T 3vgz_A 276 AVLFNPAR 283 (353)
T ss_dssp CEEEETTT
T ss_pred eEEECCCC
Confidence 78999986
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=2e-24 Score=177.55 Aligned_cols=231 Identities=15% Similarity=0.117 Sum_probs=172.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee-eeeeccccCCEEEEEECCCCCEEEEEeCCC---
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASGGLDG--- 129 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 129 (290)
.+.+..+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...+..+..+..+++|+|++++++++..++
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 108 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPF 108 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSC
T ss_pred cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcc
Confidence 34455556666667 9999995555666666689999999999887 666776666666699999999999655553
Q ss_pred cEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEe-eCCCe-EEEEECCcccEE----EeeecCCCCeEEEEEcCCC
Q 022910 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDST-VWMWNADRAAYL----NMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~dg~-i~i~d~~~~~~~----~~~~~~~~~i~~~~~~~~~ 203 (290)
.|.+||+.+++.+..+..+ ....+++|+|++++++++ ..++. |.+|++.....+ .........+..++|+|++
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred cEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 8999999999988877654 457999999999855554 55578 999998754322 1222345668999999999
Q ss_pred CEEEEE-eCCCeEEEEcCCCCee---eEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcE--EEEEcc
Q 022910 204 KTICTG-SDDATLRVWNPKSGEN---IHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKV--VSSLVS 276 (290)
Q Consensus 204 ~~l~~~-~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~--~~~~~~ 276 (290)
++++++ ..++.|++||+.+++. +..+.. ...+..++|+|+|++|++++ .++.|.+||+.+++. +..+..
T Consensus 188 ~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 188 NFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp SEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 976554 4689999999998887 666653 45678899999999777665 477899999999887 555443
Q ss_pred C----CCc---EEEEEEecCC
Q 022910 277 H----TDS---IECIGFSRSE 290 (290)
Q Consensus 277 ~----~~~---v~~i~~s~d~ 290 (290)
+ ..+ ...++|+|||
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg 284 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTE 284 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTS
T ss_pred ccccCCCCcccccceEECCCC
Confidence 2 222 2458999986
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=2e-25 Score=202.68 Aligned_cols=222 Identities=14% Similarity=0.120 Sum_probs=176.6
Q ss_pred CcCEEEEEECCCCCcEEEEecC-CC-----cEEEEEccCCeeeeeeccccC------------------------CEEEE
Q 022910 64 SDEVYSVACSPTDATLVATGGG-DD-----KGFFWRINQGDWASEIQGHKD------------------------SVSSL 113 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~------------------------~i~~~ 113 (290)
...|.+++|+| ++.+|++++. ++ .|++|++.+++....+..+.. .+.++
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45799999999 7777888777 88 899999999887666654433 27899
Q ss_pred EECCCCCEEEEEeCCCcEEEEcCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC
Q 022910 114 AFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG 191 (290)
Q Consensus 114 ~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 191 (290)
+|+|+|++|++++. +.|++|++.++. ....+..+...+..++|+|+|++|++++. +.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 99999999999886 999999999883 34456667778999999999999999885 699999999887665544433
Q ss_pred CC----------------eEEEEEcCCCCEEEEEeCCC---------------------------------eEEEEcCCC
Q 022910 192 SS----------------VTCGDFTPDGKTICTGSDDA---------------------------------TLRVWNPKS 222 (290)
Q Consensus 192 ~~----------------i~~~~~~~~~~~l~~~~~dg---------------------------------~i~i~d~~~ 222 (290)
.. +..++|+|+|++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47799999999999887765 899999988
Q ss_pred -CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcCCCcEEEEEccCCC----cEEEEEEecCC
Q 022910 223 -GENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-----DGSVHMVNITTGKVVSSLVSHTD----SIECIGFSRSE 290 (290)
Q Consensus 223 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~~~~~~~~~~~----~v~~i~~s~d~ 290 (290)
++....... ..+...+..++| |+|++|++++. +..|++||+.+++....+..+.. .+.+++|+|||
T Consensus 273 ~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 273 QAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp TCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 775443322 125678999999 99999987754 56899999999998877766543 45789999986
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.7e-24 Score=178.45 Aligned_cols=226 Identities=15% Similarity=0.204 Sum_probs=163.4
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCC-CcEEEEEcc--CCe--eeeeeccccCCEEEEEECCCCCEEEEEeC-CCcEEEE
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGD-DKGFFWRIN--QGD--WASEIQGHKDSVSSLAFSMDGQLLASGGL-DGLVQIW 134 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~d-g~i~iw~~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~ 134 (290)
..|...+.+++|+| ++.+|++++.+ +.|++|++. +++ .+..+..+. .+..++|+|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 35777899999999 55655555554 999999997 444 334444333 7889999999998877665 8899999
Q ss_pred cCC---CCceEEEEecCCCCEEEEEEcCCCCEEEEee-CCCeEEEEECCc-ccEEE----eeec-CCCCeEEEEEcCCCC
Q 022910 135 DPS---SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADR-AAYLN----MFSG-HGSSVTCGDFTPDGK 204 (290)
Q Consensus 135 d~~---~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~----~~~~-~~~~i~~~~~~~~~~ 204 (290)
++. ..+....+..+ ..+.+++|+|+++++++++ .++.|++|++.+ ++... .+.. ....+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 33444444433 4588999999999888877 889999999987 54432 2222 345788999999999
Q ss_pred EEEEEe-CCCeEEEEcCCC--Cee--eEEEeCCCC---cccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcC----CCcEE
Q 022910 205 TICTGS-DDATLRVWNPKS--GEN--IHVIRGHPY---HTEGLTCLTISADSTLALSG-SKDGSVHMVNIT----TGKVV 271 (290)
Q Consensus 205 ~l~~~~-~dg~i~i~d~~~--~~~--~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~----~~~~~ 271 (290)
+|++++ .++.|++|++.. +.. ...+..... ....+..++|+|++++|+++ ..++.|++|++. +.+.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 776554 789999999953 332 223332111 13457789999999887754 478999999998 34556
Q ss_pred EEEccCCCcEEEEEEecCC
Q 022910 272 SSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 272 ~~~~~~~~~v~~i~~s~d~ 290 (290)
..+..+.. +.+++|+|+|
T Consensus 271 ~~~~~~~~-~~~~~~s~dg 288 (343)
T 1ri6_A 271 GFQPTETQ-PRGFNVDHSG 288 (343)
T ss_dssp EEEECSSS-CCCEEECTTS
T ss_pred eeecCCCc-cceEEECCCC
Confidence 66665544 8999999986
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=9.4e-24 Score=173.58 Aligned_cols=217 Identities=9% Similarity=0.040 Sum_probs=168.4
Q ss_pred EECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeC-CCcEEEEcCCCCce-EEEEecC
Q 022910 71 ACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL-DGLVQIWDPSSGNL-KCTLEGP 148 (290)
Q Consensus 71 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~ 148 (290)
.|.+....++++++.++.|++||+.+++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4566567788899999999999999999888877666667 9999999997776665 88999999999988 7777766
Q ss_pred CCCEEEEEEcCCCCEEEEeeCCC---eEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE-EeCCCe-EEEEcCCCC
Q 022910 149 GGGVEWVSWHPRGHIVLAGSEDS---TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDAT-LRVWNPKSG 223 (290)
Q Consensus 149 ~~~i~~i~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~-i~i~d~~~~ 223 (290)
..+..+++|+|++++++++..++ .|++||+.+++.+..+.. ...+.+++|+|++++|++ ...++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66665599999999999666553 899999999988887764 455689999999986554 455678 999998754
Q ss_pred eeeEEEe-CCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcE---EEEEccCCCcEEEEEEecCC
Q 022910 224 ENIHVIR-GHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKV---VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 224 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~---~~~~~~~~~~v~~i~~s~d~ 290 (290)
..+.... ........+..++|+|+|++|+++ ..++.|++||+.+++. +..+.. ...+.+++|+|||
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg 232 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDG 232 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCC
Confidence 4331110 000134568999999999966555 4688999999999988 777775 4678899999986
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.3e-23 Score=172.67 Aligned_cols=203 Identities=12% Similarity=0.098 Sum_probs=165.2
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc-c----cCCEEEEEECCCCCEEEEEe------------CC
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-H----KDSVSSLAFSMDGQLLASGG------------LD 128 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~----~~~i~~~~~~~~~~~l~~~~------------~d 128 (290)
.+.+++|+|++..+++++..++.|.+||+.+++.+..+.. + ...+.+++|+|++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4788999995556777788889999999999887776652 1 22567899999999988886 57
Q ss_pred CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC-----------------
Q 022910 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG----------------- 191 (290)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------- 191 (290)
+.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|++||+.+++.+..+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 9999999999888877765 4457889999999988887 5889999998876654433211
Q ss_pred -------------------------------------------------CCeEEEEEcCCCCEEEEEeCCCeEEEEcCCC
Q 022910 192 -------------------------------------------------SSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (290)
Q Consensus 192 -------------------------------------------------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 222 (290)
..+.+++|+|++++++++ ++.|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 234568999999999888 69999999999
Q ss_pred CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccC
Q 022910 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus 270 ~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 270 NASIKRVPL----PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TEEEEEEEC----SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CcCcceecC----CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 988777763 345789999999999999999999999999999999988754
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=2.1e-23 Score=182.42 Aligned_cols=199 Identities=11% Similarity=0.032 Sum_probs=167.0
Q ss_pred EECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcC--CCCceEEEEecC
Q 022910 71 ACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP--SSGNLKCTLEGP 148 (290)
Q Consensus 71 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~ 148 (290)
+|+| ++.++++++.+++|.+||..+++.+..+..+.. +..++|+|++++|++++.++.|++||+ .+++.+..+..
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI- 220 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-
Confidence 3788 678899999999999999999999988874333 899999999999999999999999999 88888888874
Q ss_pred CCCEEEEEEcC----CCCEEEEeeC-CCeEEEEECCcccEEEeeecC-----------CCCeEEEEEcCCCCE-EEEEeC
Q 022910 149 GGGVEWVSWHP----RGHIVLAGSE-DSTVWMWNADRAAYLNMFSGH-----------GSSVTCGDFTPDGKT-ICTGSD 211 (290)
Q Consensus 149 ~~~i~~i~~~~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~-l~~~~~ 211 (290)
...+..++|+| +++++++++. +++|.+||..+++++..+..+ ...+..+.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45689999999 9999999885 899999999999988887642 236889999997655 456677
Q ss_pred CCeEEEEcCCCCeeeE--EEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEEcc
Q 022910 212 DATLRVWNPKSGENIH--VIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~ 276 (290)
++.|.+||+.+.+.+. .+. +...+..+.|+|+|++|++++ .+++|.+||+.+++++..+..
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~----~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG----AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE----CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEecCCCcceeEEec----cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 8999999998876544 333 345677899999999876654 588999999999999998874
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.7e-25 Score=200.40 Aligned_cols=221 Identities=13% Similarity=0.146 Sum_probs=171.4
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC---CEEEEEECCCCCEEEEEeCC---------CcEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGLD---------GLVQI 133 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~d---------g~i~i 133 (290)
.+.+++|+| ++.++++ +.||+|++|++.+++....+..|.. .|.+++|+|+|++|++++.+ +.|++
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 467889999 5566665 6899999999999988777776654 48999999999999999764 78889
Q ss_pred EcCCCCceEEEEec---CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCe----------------
Q 022910 134 WDPSSGNLKCTLEG---PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV---------------- 194 (290)
Q Consensus 134 ~d~~~~~~~~~~~~---~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i---------------- 194 (290)
||+.+++. ..+.. +...+..++|+|+|++|++++. +.|++|++.+++..+....+...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99999876 33332 3334888999999999999887 899999999887666555433333
Q ss_pred --EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEcCCCCeeeEEEeCCC---Cc
Q 022910 195 --TCGDFTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENIHVIRGHP---YH 235 (290)
Q Consensus 195 --~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~~~~~~~~---~~ 235 (290)
.+++|+|+|++|++++.++ .|++||+.+++....+.... .+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 7899999999999887543 79999999887655555321 12
Q ss_pred ccCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCcEEEEEcc-CCCcE----EEEEEecCC
Q 022910 236 TEGLTCLTISADSTLALSGSK----DGSVHMVNITTGKVVSSLVS-HTDSI----ECIGFSRSE 290 (290)
Q Consensus 236 ~~~v~~~~~~~~~~~l~~~~~----dg~i~~wd~~~~~~~~~~~~-~~~~v----~~i~~s~d~ 290 (290)
...+..++|+|||++|++... +..|++||+.++++...+.. +.+.+ ..++|||||
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCC
Confidence 567899999999998877643 35799999999988776654 33444 388999986
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=5e-24 Score=192.59 Aligned_cols=221 Identities=13% Similarity=0.119 Sum_probs=172.5
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-----C
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-----G 139 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----~ 139 (290)
..|.+++|+|+ +.++++. ++.|++||+.+++.... ..+...+.+++|+|+|++|+++ .++.|++|++.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 57999999995 6555553 49999999998876543 4466778899999999999985 579999999998 7
Q ss_pred ceEEEEecCCCC--------------EEEEEEcCCCCEEEEee---------------------------------CCCe
Q 022910 140 NLKCTLEGPGGG--------------VEWVSWHPRGHIVLAGS---------------------------------EDST 172 (290)
Q Consensus 140 ~~~~~~~~~~~~--------------i~~i~~~~~~~~l~~~~---------------------------------~dg~ 172 (290)
+.......+... +.++.|+|+|++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 766544433332 47899999999999987 4467
Q ss_pred EEEEECCcccEEEeee--cCCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEcCCCCeeeEEEeCC--CCcccCeEEEE
Q 022910 173 VWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSGENIHVIRGH--PYHTEGLTCLT 243 (290)
Q Consensus 173 i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~ 243 (290)
|++||+.+++...... .+...+..++|+|+|++|++++.++ .|++||+.+++....+... ......+..++
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 9999999887655442 4567799999999999999887765 8999999998433333211 10112246789
Q ss_pred EcC--CCCEEEEEeCCCcEEEEEcC-CCcEEEEEccCCCcEEE-EEEecCC
Q 022910 244 ISA--DSTLALSGSKDGSVHMVNIT-TGKVVSSLVSHTDSIEC-IGFSRSE 290 (290)
Q Consensus 244 ~~~--~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~-i~~s~d~ 290 (290)
|+| +|++|++++.+|.+++|.+. +++.+..+..+...+.. ++|+|+|
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC
Confidence 999 99999999999999999886 67888888888888887 7999986
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3.4e-24 Score=194.66 Aligned_cols=220 Identities=13% Similarity=0.102 Sum_probs=172.2
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
.|.+++|+| ++++|++++. +.|++|++.++. ....+..|...+..++|+|+|++|++++ ++.|++|++.+++...
T Consensus 110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 488999999 6677777665 999999999873 4455666888899999999999999987 5689999999887665
Q ss_pred EEecCCCC----------------EEEEEEcCCCCEEEEeeCCC---------------------------------eEE
Q 022910 144 TLEGPGGG----------------VEWVSWHPRGHIVLAGSEDS---------------------------------TVW 174 (290)
Q Consensus 144 ~~~~~~~~----------------i~~i~~~~~~~~l~~~~~dg---------------------------------~i~ 174 (290)
....+... +..++|+|+|++|++++.++ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 54433332 47799999999999987765 899
Q ss_pred EEECCc-ccEEEeee--cCCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEcCCCCeeeEEEeCCCC-cccCeEEEEEc
Q 022910 175 MWNADR-AAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD-----DATLRVWNPKSGENIHVIRGHPY-HTEGLTCLTIS 245 (290)
Q Consensus 175 i~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~~ 245 (290)
+||+.+ ++...... .+...+..++| |+|++|++++. +..|++||+.+++....+..... ....+..++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999988 77554433 36678999999 99999987654 56899999999887666654210 00134678999
Q ss_pred CCCCEEEEEeCCCcEEEEEcC-CCcEEEEEccCCCcEEEE-EEecCC
Q 022910 246 ADSTLALSGSKDGSVHMVNIT-TGKVVSSLVSHTDSIECI-GFSRSE 290 (290)
Q Consensus 246 ~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~i-~~s~d~ 290 (290)
|+|+++++++.+|.+++|.+. .++ +..+..|...|..+ .|+|+|
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKA 391 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTT
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCC
Confidence 999999999999988888765 455 78888888889887 599986
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=8.7e-24 Score=170.32 Aligned_cols=201 Identities=14% Similarity=0.136 Sum_probs=158.3
Q ss_pred EecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEEEEecC-CCCEEEEEEcC
Q 022910 82 TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP-GGGVEWVSWHP 159 (290)
Q Consensus 82 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~-~~~i~~i~~~~ 159 (290)
.++.++.|++|++.+++... +..|...|.+++|+|++++|++++ ++.|++|++.+ ++.......+ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 45678999999999887664 445889999999999999999987 78999999999 8877666555 36788999999
Q ss_pred CCCEEEEeeC--C--CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEcC--CCCeeeEEEeCC
Q 022910 160 RGHIVLAGSE--D--STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC-TGSDDATLRVWNP--KSGENIHVIRGH 232 (290)
Q Consensus 160 ~~~~l~~~~~--d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~--~~~~~~~~~~~~ 232 (290)
++++|++++. + ..|..|++.+++ ...+..+ ..+..++|+|++++|+ ++..++.+++|++ .++.. ..+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~- 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTH- 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCC-
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEccc-
Confidence 9999999983 3 455555665554 3344433 3588999999999887 7778999999985 33333 33333
Q ss_pred CCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcC-CCcEEEEEccCCCcEEEEEEecCC
Q 022910 233 PYHTEGLTCLTISADSTLALSGS-KDGSVHMVNIT-TGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~-~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+...+.+++|+|++++|++++ .++.+++|++. .+..+..+..|...+.+++|+|+|
T Consensus 171 --~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 171 --GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp --SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS
T ss_pred --CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC
Confidence 567899999999999887766 58899999986 566778888888899999999986
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=6.1e-23 Score=169.98 Aligned_cols=229 Identities=14% Similarity=0.225 Sum_probs=163.5
Q ss_pred ccCCcCEEEEEECCCCCcEEEEec--CCCcEEEEEccCCe--eeeeeccccCCEEEEEECCCCCEEEEEe-CCCcEEEEc
Q 022910 61 SGHSDEVYSVACSPTDATLVATGG--GDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQIWD 135 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d 135 (290)
..+...+..++|+| ++++++++. .++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 44556778899999 566555543 26899999998765 3444455677889999999999888887 679999999
Q ss_pred CCC-Cc--eEEEEecC---------CCCEEEEEEcCCCCEEEEeeCCCeEEEEECC-cccEE--Eeeec-CCCCeEEEEE
Q 022910 136 PSS-GN--LKCTLEGP---------GGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYL--NMFSG-HGSSVTCGDF 199 (290)
Q Consensus 136 ~~~-~~--~~~~~~~~---------~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~--~~~~~-~~~~i~~~~~ 199 (290)
+.. +. .+..+... ...+.+++|+|+++++++...++.|++|++. +++.. ..+.. ....+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 963 32 22333221 1248899999999966666678899999998 44432 22222 3346788999
Q ss_pred cCCCCEEEE-EeCCCeEEEEcCCC--Cee--eEEEeCCCC---cccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcC---C
Q 022910 200 TPDGKTICT-GSDDATLRVWNPKS--GEN--IHVIRGHPY---HTEGLTCLTISADSTLAL-SGSKDGSVHMVNIT---T 267 (290)
Q Consensus 200 ~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~~---~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~---~ 267 (290)
+|+|++|++ +..++.|++|++.. ++. ...+..... ....+..++|+|+|++|+ +...++.|.+|++. .
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 999997665 56688999999874 443 223332211 114588999999999774 55568999999997 3
Q ss_pred CcEEEEEccCCCcEEEEEEecCC
Q 022910 268 GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 ~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.+.+..+..+...+.+++|+|||
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTS
T ss_pred EEEeEEEecCCCCcCeEEECCCC
Confidence 35667777777788999999986
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=3.7e-24 Score=182.49 Aligned_cols=191 Identities=14% Similarity=0.108 Sum_probs=150.1
Q ss_pred CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCC----------ceE------EEEecCCC
Q 022910 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG----------NLK------CTLEGPGG 150 (290)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----------~~~------~~~~~~~~ 150 (290)
+.+++|+.... + +...+..+++++++.++++++.++ +++|+.... ..+ ..+ .+..
T Consensus 23 ~~vri~~~~~~-----~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE-----L--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKF 93 (434)
T ss_dssp CEEECSCCCSS-----C--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSS
T ss_pred eeEEecCCccc-----c--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCC
Confidence 45777654211 1 234578899999999999999888 888764210 011 111 2456
Q ss_pred CEEEEEEcCCCCEEE----EeeCCCeEEEEECCcc--------c---EEEeeecCCCCeEEEEEcCC-CCEEEEEeCCCe
Q 022910 151 GVEWVSWHPRGHIVL----AGSEDSTVWMWNADRA--------A---YLNMFSGHGSSVTCGDFTPD-GKTICTGSDDAT 214 (290)
Q Consensus 151 ~i~~i~~~~~~~~l~----~~~~dg~i~i~d~~~~--------~---~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~ 214 (290)
.|.+++|+|++++|+ +|+.|+.|++||+++. + .+..+.+|...|.+++|+|+ +.+|++++.||.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 799999999999999 7889999999998765 2 24556678999999999997 899999999999
Q ss_pred EEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC-------CcEEEEEEe
Q 022910 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT-------DSIECIGFS 287 (290)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------~~v~~i~~s 287 (290)
|++||++++........ |...|++++|+|+|++|++|+.||.|++||++ ++....+..|. ..|.+++|+
T Consensus 174 v~iwD~~~~~~~~~~~~---~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 174 IAVLQVTETVKVCATLP---STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp EEEEEESSSEEEEEEEC---GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred EEEEEcCCCcceeeccC---CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 99999999866555544 77899999999999999999999999999998 67777665543 389999999
Q ss_pred cCC
Q 022910 288 RSE 290 (290)
Q Consensus 288 ~d~ 290 (290)
+++
T Consensus 250 ~~~ 252 (434)
T 2oit_A 250 GTY 252 (434)
T ss_dssp ETT
T ss_pred cCc
Confidence 864
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=2.4e-22 Score=165.54 Aligned_cols=225 Identities=11% Similarity=0.123 Sum_probs=158.8
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc---CCeeeeeeccccCCEEEEEECCCCCEEEEEe-CCCcEEE
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN---QGDWASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQI 133 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 133 (290)
..+..+. .+.+++|+|++..+++++..++.|.+|++. ..+....+..+ ..+.+++|+|++++|++++ .++.|++
T Consensus 78 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 78 AESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICL 155 (343)
T ss_dssp EEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred cccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEE
Confidence 3444444 788999999544455566668999999994 44444555433 4588999999999888877 8899999
Q ss_pred EcCCC-CceEE----EEec-CCCCEEEEEEcCCCCEEEEee-CCCeEEEEECCc--ccE--EEeee---cC---CCCeEE
Q 022910 134 WDPSS-GNLKC----TLEG-PGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADR--AAY--LNMFS---GH---GSSVTC 196 (290)
Q Consensus 134 ~d~~~-~~~~~----~~~~-~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~--~~~--~~~~~---~~---~~~i~~ 196 (290)
|++.+ ++... .+.. ....+..++|+|+++++++++ .++.|.+|++.. ++. ...+. .. ...+..
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred EEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 99987 65432 2232 344788999999999776554 789999999954 322 22222 11 235678
Q ss_pred EEEcCCCCEEEEE-eCCCeEEEEcCC--CC--eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEE--cCCC
Q 022910 197 GDFTPDGKTICTG-SDDATLRVWNPK--SG--ENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVN--ITTG 268 (290)
Q Consensus 197 ~~~~~~~~~l~~~-~~dg~i~i~d~~--~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd--~~~~ 268 (290)
++|+|++++|+++ ..++.|++|++. ++ +.+..+.. + ..+..++|+|++++|++++ .++.|.+|+ ..++
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g 311 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT---E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 311 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC---S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC---C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCc
Confidence 9999999888754 478999999998 22 33334442 2 3388899999999888887 579999995 4466
Q ss_pred c--EEEEEccCCCcEEEEEEecC
Q 022910 269 K--VVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 269 ~--~~~~~~~~~~~v~~i~~s~d 289 (290)
+ .+..+.. .....+++|.|+
T Consensus 312 ~~~~~~~~~~-g~~p~~i~~~~~ 333 (343)
T 1ri6_A 312 LLHEKGRYAV-GQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEEEEC-SSSCCEEEEEEE
T ss_pred eeeEcccccc-CCCCeeEEEEcc
Confidence 4 4455554 356778888875
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=8.7e-24 Score=191.42 Aligned_cols=233 Identities=12% Similarity=0.057 Sum_probs=169.4
Q ss_pred CCceeeeccCCc---CEEEEEECCCCCcEEEEecCC---------CcEEEEEccCCeee--eeeccccCCEEEEEECCCC
Q 022910 54 DDSTHIFSGHSD---EVYSVACSPTDATLVATGGGD---------DKGFFWRINQGDWA--SEIQGHKDSVSSLAFSMDG 119 (290)
Q Consensus 54 ~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~~--~~~~~~~~~i~~~~~~~~~ 119 (290)
.+....+.+|.. .|.+++|+| ++++|++++.+ +.+++||+.+++.. .....|...+..++|+|+|
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred CcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 345566666665 499999999 67777777653 78899999988752 2223445558899999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEEecCCCCE------------------EEEEEcCCCCEEEEeeCCC----------
Q 022910 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGV------------------EWVSWHPRGHIVLAGSEDS---------- 171 (290)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i------------------~~i~~~~~~~~l~~~~~dg---------- 171 (290)
++|++++. +.|++|++.+++.......+...+ .+++|+|+|++|++++.++
T Consensus 126 ~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~ 204 (723)
T 1xfd_A 126 QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPT 204 (723)
T ss_dssp TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECC
T ss_pred CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeec
Confidence 99999886 799999999988776665443333 7899999999999987543
Q ss_pred ------------------------eEEEEECCcccEEEeeecC------CCCeEEEEEcCCCCEEEEEeC----CCeEEE
Q 022910 172 ------------------------TVWMWNADRAAYLNMFSGH------GSSVTCGDFTPDGKTICTGSD----DATLRV 217 (290)
Q Consensus 172 ------------------------~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~----dg~i~i 217 (290)
.|++||+.+++....+..+ ...+..++|+|+|++|++.+. +..|++
T Consensus 205 ~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 205 YTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp CSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE
T ss_pred cCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE
Confidence 7999999988765555543 567899999999998876643 357999
Q ss_pred EcCCCCeeeEEEeCCCCcccCe----EEEEEcCCCCEEEE--EeCCC------cEEEEE-cCCCc--EEEEEccCCCcEE
Q 022910 218 WNPKSGENIHVIRGHPYHTEGL----TCLTISADSTLALS--GSKDG------SVHMVN-ITTGK--VVSSLVSHTDSIE 282 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~--~~~dg------~i~~wd-~~~~~--~~~~~~~~~~~v~ 282 (290)
||+.+++....+... +...+ ..++|+|+|+.|+. +..++ .|++|| ..+++ +...+..+...+.
T Consensus 285 ~d~~~g~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 362 (723)
T 1xfd_A 285 CDATTGVCTKKHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVT 362 (723)
T ss_dssp EETTTCCEEEEEEEE--CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEE
T ss_pred EeCCCCcceEEEEec--cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEE
Confidence 999998876655431 22222 37899999997765 45566 577787 34444 1455554444555
Q ss_pred E-EEEecCC
Q 022910 283 C-IGFSRSE 290 (290)
Q Consensus 283 ~-i~~s~d~ 290 (290)
. ++|+|||
T Consensus 363 ~~~~~spdg 371 (723)
T 1xfd_A 363 KILAYDEKG 371 (723)
T ss_dssp EEEEEETTT
T ss_pred eeeEEcCCC
Confidence 5 6999986
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=2e-22 Score=165.60 Aligned_cols=207 Identities=11% Similarity=0.070 Sum_probs=165.1
Q ss_pred cEEEEecCCCcEEEEEccCCeeeeeeccccC--CEEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceEEEEecCC-----
Q 022910 78 TLVATGGGDDKGFFWRINQGDWASEIQGHKD--SVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLEGPG----- 149 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~----- 149 (290)
.+|++++.++.|++||+.+++.+..+..... .+..++|+|++++++ +++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999988877763321 478899999998664 55567899999999999887766322
Q ss_pred CCEEEEEEcCCCCEEEEee------------CCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 022910 150 GGVEWVSWHPRGHIVLAGS------------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 150 ~~i~~i~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 217 (290)
..+..++|+|++++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 1467899999999998886 579999999999888777764 4567889999999988887 688999
Q ss_pred EcCCCCeeeEEEeCCC--C-------------------------------------------------------------
Q 022910 218 WNPKSGENIHVIRGHP--Y------------------------------------------------------------- 234 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~~--~------------------------------------------------------------- 234 (290)
||+.+++....+.... .
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 9999887765554321 0
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+...+.+++|+|++++|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|+|
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg 291 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDG 291 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTS
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCC
Confidence 01234568999999999988 789999999999998888753 567899999986
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=2.4e-23 Score=195.60 Aligned_cols=224 Identities=14% Similarity=0.137 Sum_probs=182.4
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc-----------ccCCEEEEEEC-CCCCEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-----------HKDSVSSLAFS-MDGQLL 122 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l 122 (290)
.....+..|. .+..++|+| ++..|+.+ .++.|++|++...+ +..+.. |...+.+++|+ |+|++|
T Consensus 236 ~~~~~l~~~~-~~~~~~~Sp-DG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~l 311 (1045)
T 1k32_A 236 KDLRKHTSFT-DYYPRHLNT-DGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLI 311 (1045)
T ss_dssp CSCEECCCCC-SSCEEEEEE-SSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCE
T ss_pred CcceEecCCC-CcceeeEcC-CCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEE
Confidence 3445555565 466789999 66666665 48999999995443 334443 34468999999 999999
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEecCCC-CEEEEEEcCCCCEEEEeeCCCeEE-EEECCcccEEEeeecCCCCeEEEEEc
Q 022910 123 ASGGLDGLVQIWDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGSEDSTVW-MWNADRAAYLNMFSGHGSSVTCGDFT 200 (290)
Q Consensus 123 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~ 200 (290)
++++ ++.|++|++.+++.. .+..+.. .+..++|+ +++.|++++.++.+. +|++.+++..... .+...+..++|+
T Consensus 312 a~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~S 387 (1045)
T 1k32_A 312 AFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVD 387 (1045)
T ss_dssp EEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEEC
T ss_pred EEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEEC
Confidence 9888 789999999887754 3555666 79999999 999999998888899 9999887655443 777889999999
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC----------cEEEEEcCCCcE
Q 022910 201 PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG----------SVHMVNITTGKV 270 (290)
Q Consensus 201 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------~i~~wd~~~~~~ 270 (290)
|+|++|++++.++.|++||+.+++....+.. +...+..++|+|+|++|++++.++ .|++||+.+++
T Consensus 388 pDG~~la~~~~~~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~- 463 (1045)
T 1k32_A 388 RNGKFAVVANDRFEIMTVDLETGKPTVIERS---REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK- 463 (1045)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEEC---SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-
T ss_pred CCCCEEEEECCCCeEEEEECCCCceEEeccC---CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-
Confidence 9999999999999999999999887766655 667789999999999998887654 89999999887
Q ss_pred EEEEccCCCcEEEEEEecCC
Q 022910 271 VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 271 ~~~~~~~~~~v~~i~~s~d~ 290 (290)
+..+..|...+..++|+|||
T Consensus 464 ~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 464 IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp EEECSCSSSBEEEEEECTTS
T ss_pred EEEeeCCCcccCCceEcCCC
Confidence 77788888899999999986
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.5e-22 Score=167.34 Aligned_cols=214 Identities=10% Similarity=0.028 Sum_probs=165.8
Q ss_pred EEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecccc-CCEEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceEEEEe
Q 022910 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLE 146 (290)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~ 146 (290)
.+++++ ++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 456777 78899999999999999999998887776443 2578899999998655 45568999999999998887776
Q ss_pred cCC------CCEEEEEEcCCCCEEEEeeCC------------CeEEEEECCcccE---EEeeecCCCCeEEEEEcCCCCE
Q 022910 147 GPG------GGVEWVSWHPRGHIVLAGSED------------STVWMWNADRAAY---LNMFSGHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 147 ~~~------~~i~~i~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~ 205 (290)
... ..+..++|+|++++|++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 432 236789999999999998865 8999999988543 33333 344688999999999
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeCCCC---------------------------------------------------
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRGHPY--------------------------------------------------- 234 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------------------------- 234 (290)
+++++ +.|++||+.+++....+.....
T Consensus 161 l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 66654 3499999999887766643210
Q ss_pred --------------cccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 235 --------------HTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 235 --------------~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
....+..++|+| ++++|+++ ++.|++||+.+++.+..+.. ...+.+++|+|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg 306 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKG 306 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSS
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCC
Confidence 011355778889 99999988 88999999999999888874 3457899999985
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=3.6e-23 Score=186.99 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=171.1
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccC-----CeeeeeeccccCC--------------EEEEEE
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-----GDWASEIQGHKDS--------------VSSLAF 115 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~--------------i~~~~~ 115 (290)
.....+..+...+.+++|+| +++.|+++ .++.|++|++.+ ++.......+... +.++.|
T Consensus 111 ~~~~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 111 RKVTYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW 188 (706)
T ss_dssp TEEEEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE
T ss_pred CceEEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE
Confidence 34455666778889999999 66667664 579999999998 7766544434333 478999
Q ss_pred CCCCCEEEEEe---------------------------------CCCcEEEEcCCCCceEEEEe--cCCCCEEEEEEcCC
Q 022910 116 SMDGQLLASGG---------------------------------LDGLVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPR 160 (290)
Q Consensus 116 ~~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~~~~ 160 (290)
+|+|++|++++ .+..|++||+.+++...... .+...+.+++|+|+
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 99999999987 44689999999887654442 35567999999999
Q ss_pred CCEEEEeeCCC-----eEEEEECCcccEEEeee-c-CCC---CeEEEEEcC--CCCEEEEEeCCCeEEEEcCC-CCeeeE
Q 022910 161 GHIVLAGSEDS-----TVWMWNADRAAYLNMFS-G-HGS---SVTCGDFTP--DGKTICTGSDDATLRVWNPK-SGENIH 227 (290)
Q Consensus 161 ~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~-~-~~~---~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~~~~~ 227 (290)
+++|++++.++ .|++||+.+++....+. . +.. .+..++|+| +|++++++..+|.+++|.+. ++..+.
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE
Confidence 99999987765 89999999883333332 1 222 246789999 99999999999998998775 555556
Q ss_pred EEeCCCCcccCeEE-EEEcCCCCEEEEEeC-CC----cEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 228 VIRGHPYHTEGLTC-LTISADSTLALSGSK-DG----SVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 228 ~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~-dg----~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.+.. +...+.. ++|+|+++.|+.++. ++ .|+.|++.+++ +..+. |...+.+++|||||
T Consensus 349 ~l~~---~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg 412 (706)
T 2z3z_A 349 QVTK---GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDG 412 (706)
T ss_dssp ECCC---SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTS
T ss_pred ecCC---CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCC
Confidence 6554 5556766 799999987766554 44 67778887766 34444 66789999999986
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=4.7e-22 Score=164.33 Aligned_cols=212 Identities=12% Similarity=0.052 Sum_probs=163.1
Q ss_pred ceeeeccCC-cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccc------cCCEEEEEECCCCCEEEEEeCC
Q 022910 56 STHIFSGHS-DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH------KDSVSSLAFSMDGQLLASGGLD 128 (290)
Q Consensus 56 ~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~d 128 (290)
.+..+..+. ..+..++|+|++..+++++..++.|.+|++.+++.+..+... ...+..++|+|++++|++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 33 VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccc
Confidence 344444333 257889999955556677778899999999998887766532 2237789999999999998865
Q ss_pred ------------CcEEEEcCCCCce---EEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC--
Q 022910 129 ------------GLVQIWDPSSGNL---KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-- 191 (290)
Q Consensus 129 ------------g~i~i~d~~~~~~---~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-- 191 (290)
+.|.+||+.+++. +..+..+ ..+.+++|+|+++ +++++. .|++||+.+++.+..+....
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~ 188 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWN 188 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCC
T ss_pred ccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccC
Confidence 8999999988543 3444433 3588899999999 555543 49999999887766554221
Q ss_pred ------------------------------------------------------------------CCeEEEEEcC-CCC
Q 022910 192 ------------------------------------------------------------------SSVTCGDFTP-DGK 204 (290)
Q Consensus 192 ------------------------------------------------------------------~~i~~~~~~~-~~~ 204 (290)
..+..++|+| +++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~ 268 (349)
T 1jmx_B 189 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN 268 (349)
T ss_dssp CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT
T ss_pred CccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC
Confidence 1345677889 999
Q ss_pred EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccC
Q 022910 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
+++++ ++.|++||+.+++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus 269 ~l~~~--~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 269 QIYGV--LNRLAKYDLKQRKLIKAANL----DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEE--ESEEEEEETTTTEEEEEEEC----SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEE--cCeEEEEECccCeEEEEEcC----CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99888 88999999999988777763 345678999999999988888999999999999999988765
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=4.2e-21 Score=159.82 Aligned_cols=224 Identities=14% Similarity=0.148 Sum_probs=159.2
Q ss_pred CCcCEEEEEECCCCCcEEEEecCC----CcEEEEEccC--Cee--eeeeccccCCEEEEEECCCCCEEEEEe-CCCcEEE
Q 022910 63 HSDEVYSVACSPTDATLVATGGGD----DKGFFWRINQ--GDW--ASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQI 133 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 133 (290)
+...+..++|+| ++++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.|.+
T Consensus 48 ~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 677788899999 66667776664 7999999876 432 3333434556777888 788777766 5789999
Q ss_pred EcCCCCceEEE----Ee--c--------CCCCEEEEEEcCCCCEEEEee-CCCeEEEEECCcccE------E-------E
Q 022910 134 WDPSSGNLKCT----LE--G--------PGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAAY------L-------N 185 (290)
Q Consensus 134 ~d~~~~~~~~~----~~--~--------~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~------~-------~ 185 (290)
|++.....+.. +. + +...+.+++|+|++++|++++ .++.|++|++..... + .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99975433211 11 1 122358899999999766655 478999999875431 1 1
Q ss_pred eeecCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC--CcE
Q 022910 186 MFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKD--GSV 260 (290)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i 260 (290)
........+..++|+|+++++++++ .++.|.+|++.++.. +..+.....+......++|+|+|++|+++..+ +.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1223455678999999999888777 689999999987754 33344333344567899999999998777665 899
Q ss_pred EEEEcC--CCc--EEEEEccCCCcEEEEEEecCC
Q 022910 261 HMVNIT--TGK--VVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 261 ~~wd~~--~~~--~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.+|++. +++ .+..+.. ...+++++|+|||
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred EEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC
Confidence 999995 455 4555555 5678899999986
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.1e-23 Score=182.05 Aligned_cols=215 Identities=14% Similarity=0.101 Sum_probs=159.8
Q ss_pred CcCEEEEEECCCCCcEEEEecC-CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeC---CCcEEEEcCCC-
Q 022910 64 SDEVYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL---DGLVQIWDPSS- 138 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~- 138 (290)
..+|++++|+| +++.||+++. +|+++||++..++.......+...+..++|+|+ +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 56899999999 6667777665 999999999766654444333368999999999 77777664 45556655432
Q ss_pred --CceEEEEecCCCCEEEEEEcCCCCE-EEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCC---
Q 022910 139 --GNLKCTLEGPGGGVEWVSWHPRGHI-VLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD--- 212 (290)
Q Consensus 139 --~~~~~~~~~~~~~i~~i~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--- 212 (290)
+... .+.... .+...+|+|+++. +++++..+.+.+||+.+++.......+. .+++|+|+|++|++++.+
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC
Confidence 2322 333332 3556788888763 3344444556699998887655544333 789999999999988777
Q ss_pred -CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCcEEEEEccCCCcEEEEE----
Q 022910 213 -ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG--SVHMVNITTGKVVSSLVSHTDSIECIG---- 285 (290)
Q Consensus 213 -g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~v~~i~---- 285 (290)
+.|++||+.+++.. .+.. +...+..++|+|||++|+++..++ .|++||+.+++.. .+..|...+..++
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~---~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDS---GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEEETTTCCCE-EECC---SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred CeEEEEEcCCCCCce-Eeec---CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 78999999888764 4444 567789999999999999888888 8999999999888 7777877777777
Q ss_pred ----EecCC
Q 022910 286 ----FSRSE 290 (290)
Q Consensus 286 ----~s~d~ 290 (290)
|+|||
T Consensus 249 ~~~~~spdg 257 (582)
T 3o4h_A 249 TWLGYLPDG 257 (582)
T ss_dssp EEEEECTTS
T ss_pred cceeEcCCC
Confidence 99986
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=4.2e-22 Score=187.22 Aligned_cols=195 Identities=12% Similarity=0.045 Sum_probs=162.8
Q ss_pred CCcCEEEEEEC-CCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC-CEEEEEECCCCCEEEEEeCCCcEE-EEcCCCC
Q 022910 63 HSDEVYSVACS-PTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASGGLDGLVQ-IWDPSSG 139 (290)
Q Consensus 63 h~~~v~~~~~~-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~-i~d~~~~ 139 (290)
|...|.+++|+ | ++..|++++ ++.|.+|++..+.... +..|.. .+..++|+ +++.|++++.++.+. +|++.++
T Consensus 294 ~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp ECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred cccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 45578999999 9 666666666 7899999998776543 556777 89999999 999999998888888 9999887
Q ss_pred ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC------
Q 022910 140 NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA------ 213 (290)
Q Consensus 140 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------ 213 (290)
+.... ..+...+..++|+|++++|++++.++.|++||+.+++.......|...+.+++|+|+|++|++++.++
T Consensus 370 ~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 370 KAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred CceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 65543 46778899999999999999999999999999999988887778888999999999999998877654
Q ss_pred ----eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 214 ----TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 214 ----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
.|++||+.+++ ...+.. +...+..++|+|+|++|++++.++...+|+..
T Consensus 449 ~~~~~i~l~d~~~g~-~~~l~~---~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRK-IFAATT---ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECSC---SSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred CCCCeEEEEECCCCc-EEEeeC---CCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 89999999877 444444 56678889999999999999987777766643
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=3.4e-20 Score=154.29 Aligned_cols=223 Identities=11% Similarity=0.141 Sum_probs=154.7
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec--------------cccCCEEEEEECCCCCEEEE
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--------------GHKDSVSSLAFSMDGQLLAS 124 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~ 124 (290)
....+......+++ ++..++++...++.|.+|++.....+..+. .+...+.+++|+|++++|++
T Consensus 94 ~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 94 TQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred EeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 33445567778888 366666666678999999997543322111 12234688999999997766
Q ss_pred Ee-CCCcEEEEcCCCCc-------eE------EEEecCCCCEEEEEEcCCCCEEEEee-CCCeEEEEECCcccE--EEee
Q 022910 125 GG-LDGLVQIWDPSSGN-------LK------CTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAAY--LNMF 187 (290)
Q Consensus 125 ~~-~dg~i~i~d~~~~~-------~~------~~~~~~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~ 187 (290)
++ .++.|.+|++.... +. .........+..++|+|+++++++++ .++.|.+|++.+++. +..+
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 55 47899999887543 21 11223445688999999999887777 689999999986643 2222
Q ss_pred e---cCCCCeEEEEEcCCCCEEEEEeCC--CeEEEEcCC--CCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CC
Q 022910 188 S---GHGSSVTCGDFTPDGKTICTGSDD--ATLRVWNPK--SGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGS-KD 257 (290)
Q Consensus 188 ~---~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~--~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 257 (290)
. .+...+..++|+|+|++|+++..+ +.|.+|++. +++. +..+.. ...+..++|+|+|++|++++ .+
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~----g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT----GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC----SSCCCEEEECTTSCEEEEEETTT
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC----CCCCceEEECCCCCEEEEEECCC
Confidence 2 233457899999999999776654 899999985 3442 223331 34678899999999888887 57
Q ss_pred CcEEEE--EcCCCcEEEEEc-cCCCcEEEEEEe
Q 022910 258 GSVHMV--NITTGKVVSSLV-SHTDSIECIGFS 287 (290)
Q Consensus 258 g~i~~w--d~~~~~~~~~~~-~~~~~v~~i~~s 287 (290)
+.|.+| |..++++..... .+...+.||+|.
T Consensus 328 ~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 328 NVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 889996 555777655432 345679999997
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=189.71 Aligned_cols=218 Identities=13% Similarity=0.139 Sum_probs=161.2
Q ss_pred EEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccC---CEEEEEECCCCCEEEEEeC---------CCcEEEEcC
Q 022910 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGL---------DGLVQIWDP 136 (290)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~ 136 (290)
+++|+| ++.+++++ .++.|++|++.+++....+..+.. .+.+++|+|+|++|++++. ++.|++||+
T Consensus 20 ~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWIS-GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESS-SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECC-CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 779999 55666554 699999999999987776665543 4889999999999998876 689999999
Q ss_pred CCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee-ecCCCCe-----------------EEEE
Q 022910 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSSV-----------------TCGD 198 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i-----------------~~~~ 198 (290)
.+++.+.... ....+..++|+|+|+.|+++. ++.|++|++.+++..+.. .++...| .+++
T Consensus 98 ~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 98 SNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 9887621111 124588899999999999986 689999999888765432 2222222 4899
Q ss_pred EcCCCCEEEEEeCCC----------------------------------eEEEEcCCCCeee--EEEeC---CCCcccCe
Q 022910 199 FTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENI--HVIRG---HPYHTEGL 239 (290)
Q Consensus 199 ~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~--~~~~~---~~~~~~~v 239 (290)
|+|+|++|++++.|. .|++||+.+++.. ..+.. ...+...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999887552 7889999887642 12211 01256678
Q ss_pred EEEEEcCCCCEEEEEeCC----CcEEEEE----cCCCcEEEEE----ccCCCcEE-----EEEEecCC
Q 022910 240 TCLTISADSTLALSGSKD----GSVHMVN----ITTGKVVSSL----VSHTDSIE-----CIGFSRSE 290 (290)
Q Consensus 240 ~~~~~~~~~~~l~~~~~d----g~i~~wd----~~~~~~~~~~----~~~~~~v~-----~i~~s~d~ 290 (290)
..++|+||++++++.... ..|++|| +.++++...+ ..|.+.|. .++|+|||
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 999999998877774432 2489999 8777765544 36666676 88999986
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=2e-20 Score=154.89 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=147.3
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEec-CCCcEEEEEccC-C--eeeeeecc---------ccCCEEEEEECCCCCEEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGG-GDDKGFFWRINQ-G--DWASEIQG---------HKDSVSSLAFSMDGQLLA 123 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~-~--~~~~~~~~---------~~~~i~~~~~~~~~~~l~ 123 (290)
+..+..+...+..++|+| ++.+|++++ .++.|.+|++.. + +.+..+.. +...+.+++|+|++++++
T Consensus 78 ~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 78 LNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp EEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred eeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 344455777889999999 555555554 789999999963 2 22233321 123488999999999666
Q ss_pred EEeCCCcEEEEcCC-CCceEE--EEec-CCCCEEEEEEcCCCCEEEE-eeCCCeEEEEECCc--ccE--EEeeecCC---
Q 022910 124 SGGLDGLVQIWDPS-SGNLKC--TLEG-PGGGVEWVSWHPRGHIVLA-GSEDSTVWMWNADR--AAY--LNMFSGHG--- 191 (290)
Q Consensus 124 ~~~~dg~i~i~d~~-~~~~~~--~~~~-~~~~i~~i~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~--- 191 (290)
+...++.|++|++. +++... .+.. ....+..++|+|+++++++ +..++.|.+|++.. ++. +..+....
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 66678899999998 554332 2222 2336788999999996665 55688999999874 432 22333222
Q ss_pred ---CCeEEEEEcCCCCEEE-EEeCCCeEEEEcCCCC---eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-CcEEEE
Q 022910 192 ---SSVTCGDFTPDGKTIC-TGSDDATLRVWNPKSG---ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-GSVHMV 263 (290)
Q Consensus 192 ---~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~w 263 (290)
..+..++|+|+|++|+ +...++.|.+|++... ..+..+.. +...+..++|+|+|++|++++.+ +.|.+|
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST---EGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC---SSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec---CCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 4588999999999875 5566899999998732 33333333 45567899999999988888764 899999
Q ss_pred --EcCCCcEE
Q 022910 264 --NITTGKVV 271 (290)
Q Consensus 264 --d~~~~~~~ 271 (290)
|..++++.
T Consensus 314 ~~d~~tg~l~ 323 (347)
T 3hfq_A 314 ARDLTSGKLS 323 (347)
T ss_dssp EECTTTCCEE
T ss_pred EEeCCCCeEE
Confidence 55567655
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.89 E-value=6.9e-20 Score=150.68 Aligned_cols=223 Identities=14% Similarity=0.147 Sum_probs=173.2
Q ss_pred CcCEEEEEECCCCCcEEEEecCC------------------------CcEEEEEccCCeeeeeec-cccCCEEEEEECCC
Q 022910 64 SDEVYSVACSPTDATLVATGGGD------------------------DKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMD 118 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~d------------------------g~i~iw~~~~~~~~~~~~-~~~~~i~~~~~~~~ 118 (290)
-+.+.+++++| +++++++...+ +.|.+||..+++....+. .+-.....++++|+
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 46899999999 67788887766 479999998888776554 34457899999999
Q ss_pred CCEEEEEeCCCcEEEEcCCCCc-eEEEEe---------cCCCCEEEEEEcC-CCCEEEEee-CCCeEEEEECCcccEEEe
Q 022910 119 GQLLASGGLDGLVQIWDPSSGN-LKCTLE---------GPGGGVEWVSWHP-RGHIVLAGS-EDSTVWMWNADRAAYLNM 186 (290)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~-~~~~~~---------~~~~~i~~i~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~ 186 (290)
++++++...++.|++|+..... .+..+. .+......++++| ++.++++.+ .++.|++|+ ..++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888889999999986542 455552 3344689999999 788888876 689999999 45666666
Q ss_pred eecCC----------CCeEEEEEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE-
Q 022910 187 FSGHG----------SSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG- 254 (290)
Q Consensus 187 ~~~~~----------~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 254 (290)
+.... ..+..|+++|+ +.++++...++.|++|+..+++.+..+.... +...+..++|+| +..+++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTTCEEEEEEET-TEEEEEEC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCCCcceeeecC-CEEEEeCC
Confidence 54222 34899999998 7777777889999999999888888775432 556788999999 4333333
Q ss_pred ------eCCCcEEEEEcCCCcEEEEEc---cCCCcEEEEEEecCC
Q 022910 255 ------SKDGSVHMVNITTGKVVSSLV---SHTDSIECIGFSRSE 290 (290)
Q Consensus 255 ------~~dg~i~~wd~~~~~~~~~~~---~~~~~v~~i~~s~d~ 290 (290)
..+..|++|++.+++.+..+. ++...+.+|+++|+|
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 335589999999999999884 566789999999986
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=7.2e-21 Score=158.77 Aligned_cols=224 Identities=8% Similarity=0.102 Sum_probs=156.9
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc-CCeeeeeeccc-cCCEEEEEECCCCCE--EEEEe------------
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRIN-QGDWASEIQGH-KDSVSSLAFSMDGQL--LASGG------------ 126 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~--l~~~~------------ 126 (290)
+...+..++|+| ++++|++++.+ .|.+|++. +++........ .+.+.+++|+|++++ ++++.
T Consensus 38 ~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 334678899999 66777777766 99999997 77654432211 123456899999994 45553
Q ss_pred -CCCcEEEEcCC-CCceEEEEe----cCCCCEEEEEEcCCCCEEEEeeC-CCeEEEEECC-cccEE--Eeee--cCCCCe
Q 022910 127 -LDGLVQIWDPS-SGNLKCTLE----GPGGGVEWVSWHPRGHIVLAGSE-DSTVWMWNAD-RAAYL--NMFS--GHGSSV 194 (290)
Q Consensus 127 -~dg~i~i~d~~-~~~~~~~~~----~~~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i 194 (290)
.+|.+.+|++. .++....+. .+...+.+++|+|+|++|+++.. ++.|++|++. +++.. ..+. .+...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999997 466544443 24567999999999998887764 6799999998 66543 3333 235678
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEcCC--CCeee---EEEeCCCC----ccc------CeEEEE-EcCCCCEEEEEeCC
Q 022910 195 TCGDFTPDGKTICTGSD-DATLRVWNPK--SGENI---HVIRGHPY----HTE------GLTCLT-ISADSTLALSGSKD 257 (290)
Q Consensus 195 ~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~~~~~----~~~------~v~~~~-~~~~~~~l~~~~~d 257 (290)
..++|+|+|++|++++. ++.|.+|++. +++.. ..+...+. +.. .+..++ |+|+|++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999999987775 7899998754 55542 22332211 121 478999 99999998877643
Q ss_pred C------cEEEEEcC-CCcEEE---EEccCCCcEEEEEEec
Q 022910 258 G------SVHMVNIT-TGKVVS---SLVSHTDSIECIGFSR 288 (290)
Q Consensus 258 g------~i~~wd~~-~~~~~~---~~~~~~~~v~~i~~s~ 288 (290)
. .|.+|++. ++++.. .+..+...+..++|+|
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 2 89999996 676543 2333455677888998
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=1.9e-21 Score=172.05 Aligned_cols=219 Identities=13% Similarity=0.153 Sum_probs=160.6
Q ss_pred CceeeeccCC-cCEEEEEECCCCCcEEEEecC---CCcEEEEEccC--CeeeeeeccccCCEEEEEECCCCCE-EEEEeC
Q 022910 55 DSTHIFSGHS-DEVYSVACSPTDATLVATGGG---DDKGFFWRINQ--GDWASEIQGHKDSVSSLAFSMDGQL-LASGGL 127 (290)
Q Consensus 55 ~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~ 127 (290)
...+.+..|. ..+..++|+| + +++++++. +...++|.+.. ......+.... .+...+|+|+++. +++.+.
T Consensus 54 g~~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~ 130 (582)
T 3o4h_A 54 GETVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PMRILSGVDTGEAVVFTGAT 130 (582)
T ss_dssp TEEEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSC-SBEEEEEEECSSCEEEEEEC
T ss_pred CCcEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccCCCccccccCCC-CceeeeeCCCCCeEEEEecC
Confidence 3345566666 6899999999 5 67777664 45566766543 22222333222 3446688888863 333344
Q ss_pred CCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCC----CeEEEEECCcccEEEeeecCCCCeEEEEEcCCC
Q 022910 128 DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 128 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
++.+.+||+.+++.......+. .+++|+|+|++|++++.+ +.|++||+.+++.. .+..+...+..++|+|+|
T Consensus 131 ~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG 206 (582)
T 3o4h_A 131 EDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGM 206 (582)
T ss_dssp SSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTS
T ss_pred CCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCC
Confidence 4556699999887665554433 789999999999988876 78999999888754 567788889999999999
Q ss_pred CEEEEEeCCC--eEEEEcCCCCeeeEEEeCCCCcccCeEEEE--------EcCCCCEEEEEeCCCcEEEEEcCCCcEEEE
Q 022910 204 KTICTGSDDA--TLRVWNPKSGENIHVIRGHPYHTEGLTCLT--------ISADSTLALSGSKDGSVHMVNITTGKVVSS 273 (290)
Q Consensus 204 ~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 273 (290)
++|+++..++ .|++||+.+++.. .+.. +...+..++ |+|+|.++++++.+|.+++|++ ++.+.
T Consensus 207 ~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~- 279 (582)
T 3o4h_A 207 KVTAGLETAREARLVTVDPRDGSVE-DLEL---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE- 279 (582)
T ss_dssp CEEEEEECSSCEEEEEECTTTCCEE-ECCC---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-
T ss_pred CEEEEccCCCeeEEEEEcCCCCcEE-EccC---CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-
Confidence 9999888888 8999999988876 4443 444455555 9999999999999999999999 66554
Q ss_pred EccCCCcEEEEEEecCC
Q 022910 274 LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 274 ~~~~~~~v~~i~~s~d~ 290 (290)
.+.+.|.+++|+ +|
T Consensus 280 --~~~~~v~~~~~s-dg 293 (582)
T 3o4h_A 280 --APQGNHGRVVLW-RG 293 (582)
T ss_dssp --CCSSEEEEEEEE-TT
T ss_pred --cCCCceEEEEec-CC
Confidence 345788899998 64
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=1.3e-19 Score=150.89 Aligned_cols=225 Identities=15% Similarity=0.130 Sum_probs=156.8
Q ss_pred CceeeeccCCcCEEEEEECCCCCcEEEEec----------CCCcEEEEEccCCeeeeeeccc------cCCEEEEEECCC
Q 022910 55 DSTHIFSGHSDEVYSVACSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQGH------KDSVSSLAFSMD 118 (290)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~------~~~i~~~~~~~~ 118 (290)
+.+..+..+..+ .++|+| ++++++++. .++.|.+||+.+++.+..+... ......++|+|+
T Consensus 42 ~~~~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spd 118 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTD 118 (361)
T ss_dssp CEEEEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTT
T ss_pred eEEEEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCC
Confidence 345566666666 899999 666666654 3567999999998887776532 234567999999
Q ss_pred CCEEEEEeC--CCcEEEEcCCCCceEEE-EecCCCCEEEEEEcCCC-CEEEEeeCC------------------------
Q 022910 119 GQLLASGGL--DGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRG-HIVLAGSED------------------------ 170 (290)
Q Consensus 119 ~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~~~~~-~~l~~~~~d------------------------ 170 (290)
|++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|.+ ..+++.+.+
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~ 196 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMF 196 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCS
T ss_pred CCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceE
Confidence 999998864 58999999999988776 43211 1112233322 233333333
Q ss_pred ------------------------CeEEEEECCccc--EEEeeecC----------CCCeEEEEEcCCCCEEEEEeC---
Q 022910 171 ------------------------STVWMWNADRAA--YLNMFSGH----------GSSVTCGDFTPDGKTICTGSD--- 211 (290)
Q Consensus 171 ------------------------g~i~i~d~~~~~--~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~--- 211 (290)
+.|+++|+.... ....+... ......++|+|+++.++++..
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp CTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred cCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 344444443221 11111000 011112688999888877643
Q ss_pred --------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--cEEEEEccCCCcE
Q 022910 212 --------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG--KVVSSLVSHTDSI 281 (290)
Q Consensus 212 --------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~v 281 (290)
.+.|.+||+.+++.+..+.. +. +.+++|+|+|++|++++. +.|.+||+.++ +++.++..+....
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~---~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P 350 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPG---RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEAS 350 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEEC---TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSE
T ss_pred CcccccCCCceEEEEECCCCcEEEEEec---CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCc
Confidence 34899999999999988886 33 899999999999999887 99999999999 9999987777889
Q ss_pred EEEEEecCC
Q 022910 282 ECIGFSRSE 290 (290)
Q Consensus 282 ~~i~~s~d~ 290 (290)
..++|+|+|
T Consensus 351 ~~~~~~p~G 359 (361)
T 2oiz_A 351 LQVQFHPVG 359 (361)
T ss_dssp EEEEECCCS
T ss_pred EEEEecCCC
Confidence 999999997
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=2.4e-18 Score=138.54 Aligned_cols=222 Identities=13% Similarity=0.190 Sum_probs=168.7
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec------cccCCEEEEEE-CCCCCEEEEEeC-CCcEEE
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ------GHKDSVSSLAF-SMDGQLLASGGL-DGLVQI 133 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~~~i~~~~~-~~~~~~l~~~~~-dg~i~i 133 (290)
+|-..+.+++++| ++.++++...++.|.+|+.. ++.+..+. .+...+..+++ .+++.++++... ++.|++
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4556789999999 66788888888999999987 55555543 24457899999 467766666543 789999
Q ss_pred EcCCCCceEEEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee--cCCCCeEEEEEcCCCCEEEEEe
Q 022910 134 WDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 134 ~d~~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
|+ .+++.+..+.. +...+..++++|+++++++...++.|++|+.. ++.+..+. .+...+..++++|+++++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 56776666643 33568999999999988887888999999964 45555553 3445689999999999888878
Q ss_pred CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC-cEEEEEcCCCcEEEEEccCC--CcEEEEEEe
Q 022910 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-SVHMVNITTGKVVSSLVSHT--DSIECIGFS 287 (290)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~~~~~~~~~~--~~v~~i~~s 287 (290)
.++.|++|+.. ++.+..+... .+...+..++++++|+++++...++ .|++|+. +++.+..+..+. ..+.+++|+
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGE-GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCT-TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCEEEEEcCC-CCEEEEEccC-CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 89999999984 5555555432 1235688999999999888888776 9999995 677787776543 347899999
Q ss_pred cCC
Q 022910 288 RSE 290 (290)
Q Consensus 288 ~d~ 290 (290)
|+|
T Consensus 260 ~~g 262 (286)
T 1q7f_A 260 DDG 262 (286)
T ss_dssp TTT
T ss_pred CCC
Confidence 986
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=3.5e-21 Score=174.88 Aligned_cols=221 Identities=14% Similarity=0.182 Sum_probs=160.2
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCC-----EEEEEECCCCCEEEEEeCC---------Cc
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS-----VSSLAFSMDGQLLASGGLD---------GL 130 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~d---------g~ 130 (290)
....+++|+| ++.+++++ ++.|++|++.+++....+..|... ...+.|||+|++|+.++.+ +.
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3456899999 77888876 899999999999877777766532 2447899999999998875 66
Q ss_pred EEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee-ecCCCCe---------------
Q 022910 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSSV--------------- 194 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i--------------- 194 (290)
+.+||+.+++.. .+..+...+...+|||+|+.||.+. ++.|++|++.++...+.. .++...+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 779999998755 4555677899999999999999885 689999999887654322 2222222
Q ss_pred --EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEcCCC---Ce--eeEEEeC
Q 022910 195 --TCGDFTPDGKTICTGSDDA------------------------------------TLRVWNPKS---GE--NIHVIRG 231 (290)
Q Consensus 195 --~~~~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~--~~~~~~~ 231 (290)
..+.|||+|++|+.++.|. .|++||+.+ ++ ....+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 3589999999998775221 588899988 63 2233332
Q ss_pred CC---CcccCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCc----EE--EEE--ccCCCcEE-----EEEEecCC
Q 022910 232 HP---YHTEGLTCLTISADSTLALSGSK----DGSVHMVNITTGK----VV--SSL--VSHTDSIE-----CIGFSRSE 290 (290)
Q Consensus 232 ~~---~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~wd~~~~~----~~--~~~--~~~~~~v~-----~i~~s~d~ 290 (290)
.. .+...+..++|+|||++++.... +..|++||+.+++ +. ..+ ..|...|. .++|+|||
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 10 15567899999999997665533 3479999999887 22 122 34555554 78899986
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=4.7e-20 Score=154.76 Aligned_cols=214 Identities=12% Similarity=0.033 Sum_probs=156.9
Q ss_pred CCCceeeeccCCcCEEE-----EEECCCCCcEEEEecC-CC--cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEE
Q 022910 53 PDDSTHIFSGHSDEVYS-----VACSPTDATLVATGGG-DD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLAS 124 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~-----~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 124 (290)
....+..+..|...... .+|+| +++.|+.++. ++ .|.+|++.+++.......+...+..+.|+|++++|+.
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence 35567788888877776 88999 5555555554 66 4888899888877766666555556789999999999
Q ss_pred EeCCCcEEEEcCCCCceEEEEecCCCCEEEEE--EcCCCCEEEEe----------------------eCCCeEEEEECCc
Q 022910 125 GGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVS--WHPRGHIVLAG----------------------SEDSTVWMWNADR 180 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~--~~~~~~~l~~~----------------------~~dg~i~i~d~~~ 180 (290)
++.++.|++||+.+++....+..+...+.... ++|++.+++.. ..+..|++||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999999988777776665554444 48999988742 2447899999998
Q ss_pred ccEEEeeecCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEE
Q 022910 181 AAYLNMFSGHGSSVTCGDFTP-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS 253 (290)
Q Consensus 181 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 253 (290)
++.... ..+...+..++|+| +++.|+..... ..|.++|+..+.. ..+.... ....+..+.|+|+|+.|+.
T Consensus 178 g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~-~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 178 GESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA-EGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp CCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC-TTEEEEEEEECTTSSCEEE
T ss_pred CceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC-CCcccccceECCCCCEEEE
Confidence 875444 34567789999999 99988877653 3788888876543 3333211 1135778899999997765
Q ss_pred EeC-CC----cEEEEEcCCCcE
Q 022910 254 GSK-DG----SVHMVNITTGKV 270 (290)
Q Consensus 254 ~~~-dg----~i~~wd~~~~~~ 270 (290)
.+. ++ .|++||+.+++.
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCE
T ss_pred EecCCCCCcceEEEEecCCCce
Confidence 443 22 399999998874
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.7e-21 Score=174.15 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=158.6
Q ss_pred CceeeeccCCc---CEEEEEECCCCCcEEEEecC---------CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEE
Q 022910 55 DSTHIFSGHSD---EVYSVACSPTDATLVATGGG---------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL 122 (290)
Q Consensus 55 ~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 122 (290)
.....+.+|.. .|.+++|+| ++++|++++. ++.|++|++.+++.+.... ....+..++|+|+|++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~l 124 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKL 124 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCE
T ss_pred cEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEE
Confidence 34455555544 489999999 7777777665 6899999999887631111 12468889999999999
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEe-cCCCCE-----------------EEEEEcCCCCEEEEeeCCC-------------
Q 022910 123 ASGGLDGLVQIWDPSSGNLKCTLE-GPGGGV-----------------EWVSWHPRGHIVLAGSEDS------------- 171 (290)
Q Consensus 123 ~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i-----------------~~i~~~~~~~~l~~~~~dg------------- 171 (290)
+.+. ++.|++|++.+++...... ++...+ .+++|+|+|++|++++.+.
T Consensus 125 a~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~ 203 (719)
T 1z68_A 125 AYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD 203 (719)
T ss_dssp EEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCS
T ss_pred EEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCC
Confidence 9986 7899999999887654332 222222 4899999999999987652
Q ss_pred ---------------------eEEEEECCcccEE--------EeeecCCCCeEEEEEcCCCCEEEEEeCC----CeEEEE
Q 022910 172 ---------------------TVWMWNADRAAYL--------NMFSGHGSSVTCGDFTPDGKTICTGSDD----ATLRVW 218 (290)
Q Consensus 172 ---------------------~i~i~d~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~ 218 (290)
.|++||+.+++.. ..+..+...+..++|+|+++++++.... ..|.+|
T Consensus 204 ~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~ 283 (719)
T 1z68_A 204 EQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSIC 283 (719)
T ss_dssp SSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEE
T ss_pred CCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEE
Confidence 7899999987642 1233577789999999998777764432 248889
Q ss_pred c----CCCCeeeEEE----eCCCCcccCeE-----EEEEcCCCCEEEE--EeCCC--cEEEEEcCCCcEEEEEccCCCcE
Q 022910 219 N----PKSGENIHVI----RGHPYHTEGLT-----CLTISADSTLALS--GSKDG--SVHMVNITTGKVVSSLVSHTDSI 281 (290)
Q Consensus 219 d----~~~~~~~~~~----~~~~~~~~~v~-----~~~~~~~~~~l~~--~~~dg--~i~~wd~~~~~~~~~~~~~~~~v 281 (290)
| +.+++....+ .. +...+. .+.|+|+|+.|+. +..+| .|++|++.+++ ...+..+...|
T Consensus 284 d~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v 359 (719)
T 1z68_A 284 DFREDWQTWDCPKTQEHIEES---RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEA 359 (719)
T ss_dssp EECSSSSSEECCGGGEEEEEC---SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCE
T ss_pred cccCCCCCCceEEEEeccccc---CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEE
Confidence 9 7777654333 12 344454 7899999986554 44555 57778887766 45566556667
Q ss_pred EEEEEe
Q 022910 282 ECIGFS 287 (290)
Q Consensus 282 ~~i~~s 287 (290)
..+.++
T Consensus 360 ~~~~~~ 365 (719)
T 1z68_A 360 INIFRV 365 (719)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776655
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.86 E-value=1e-18 Score=141.47 Aligned_cols=227 Identities=12% Similarity=0.131 Sum_probs=171.9
Q ss_pred CCCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
+...+..+..+.....+++|+|++..+++++..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 455666777777888999999944448889988999999999877 555666777899999999999887777778999
Q ss_pred EEcCCCCceEEEEecC----CCCEEEEEEcCCCCEEEE----ee-------------CCCeEEEEECCcccEEEeeecCC
Q 022910 133 IWDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLA----GS-------------EDSTVWMWNADRAAYLNMFSGHG 191 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~ 191 (290)
+|+..+++........ ...+..++++|+|+++++ |+ ..+.|..++.. ++ +..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCC
Confidence 9999888765443321 224667999999998887 33 13467777665 44 33444556
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEcCC-CCee---eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPK-SGEN---IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 192 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
..+..++|+|+++.|++.+.++.|++|++. ++.. ...+ .. ....+..++++++|+++++. ++.|.+|+..
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~--~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV--EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC--SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC--CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 678999999999999777788999999986 4443 2333 21 44566789999999877666 7899999986
Q ss_pred CcEEEEEccCCCcEEEEEEe-cCC
Q 022910 268 GKVVSSLVSHTDSIECIGFS-RSE 290 (290)
Q Consensus 268 ~~~~~~~~~~~~~v~~i~~s-~d~ 290 (290)
++.+..+..+.. +++++|. |++
T Consensus 246 g~~~~~~~~~~~-~~~~~f~~~d~ 268 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLCFGGPEG 268 (296)
T ss_dssp SCEEEEEECSSC-CCEEEEESTTS
T ss_pred CCEEEEEECCCC-ceeEEEECCCC
Confidence 888888887777 9999994 663
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=6.7e-18 Score=138.80 Aligned_cols=233 Identities=14% Similarity=0.103 Sum_probs=170.9
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC----C
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD----G 129 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g 129 (290)
......+..+...+.+++|+| ++.+++++..++.|.+|+..+++.......+...+.+++|+|+++++++...+ +
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCc
Confidence 345566777778889999999 66788888889999999998877655443466789999999999987777666 6
Q ss_pred cEEEEcCCCCceEEEEe--cCCCCEEEEEEcCCCCEEEEeeC------CCeEEEEECCcccEEEeeecCCCCeEEEEEcC
Q 022910 130 LVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP 201 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 201 (290)
.|.+|+..++.....+. .....+..++++|+++++++... .+.|..|+..+++..... .....+..++|+|
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALST 191 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECC
Confidence 89999998887654443 23456899999999987777654 356777777655543322 2334578999999
Q ss_pred CCCEEEE-EeCCCeEEEEcCCC-CeeeEEE-----eCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE
Q 022910 202 DGKTICT-GSDDATLRVWNPKS-GENIHVI-----RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (290)
Q Consensus 202 ~~~~l~~-~~~dg~i~i~d~~~-~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 274 (290)
++++|++ .+.++.|++|++.+ +..+..+ .... ....+..++++++|+++++...++.|.+|+. .++.+..+
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC-CCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 9986654 45678999999864 3322211 1111 1135788999999998888878899999998 57777777
Q ss_pred ccCCC------cEEEEEEecCC
Q 022910 275 VSHTD------SIECIGFSRSE 290 (290)
Q Consensus 275 ~~~~~------~v~~i~~s~d~ 290 (290)
..+.. .+.+++|+||+
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTTS
T ss_pred EcCCCccccccCcceEEECCCC
Confidence 65443 68999999874
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=4.1e-19 Score=159.35 Aligned_cols=228 Identities=13% Similarity=0.122 Sum_probs=160.3
Q ss_pred eeeeccCCcCEE---------EEEEC--CCCCc-EEEEecCCCcEEEEEcc--CCeeeeeecc-----ccCCEEEEEECC
Q 022910 57 THIFSGHSDEVY---------SVACS--PTDAT-LVATGGGDDKGFFWRIN--QGDWASEIQG-----HKDSVSSLAFSM 117 (290)
Q Consensus 57 ~~~~~~h~~~v~---------~~~~~--~~~~~-~l~~~~~dg~i~iw~~~--~~~~~~~~~~-----~~~~i~~~~~~~ 117 (290)
.+.+..|...+. ..+|+ |++.. ++++...+..|.++++. .......+.. |...+..++|+|
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC
Confidence 455566655555 55565 85555 44444446677777765 2033444444 566789999999
Q ss_pred CCCEEEEEeCC----------CcEEEEcCCC------CceEEEEe-cCCCCEEEEEEcCCCCEEEEeeCC--------Ce
Q 022910 118 DGQLLASGGLD----------GLVQIWDPSS------GNLKCTLE-GPGGGVEWVSWHPRGHIVLAGSED--------ST 172 (290)
Q Consensus 118 ~~~~l~~~~~d----------g~i~i~d~~~------~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d--------g~ 172 (290)
+|++|++++.+ ..|++|++.+ ++.. .+. .+...+..++|+|+|++|+.++.+ ..
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 99999998876 5899999988 5543 444 455668889999999999987754 37
Q ss_pred EEEEECC-cc---cEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC--eEEEEcCCCCeeeEEEeCCCCcc-----cCeEE
Q 022910 173 VWMWNAD-RA---AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA--TLRVWNPKSGENIHVIRGHPYHT-----EGLTC 241 (290)
Q Consensus 173 i~i~d~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~-----~~v~~ 241 (290)
|++||+. ++ +.......+...+..+.|+|+|++++++..++ .|.+||+.+++............ ..+..
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCS
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCce
Confidence 9999998 56 44444444578899999999999888888888 78888876666533332211000 01567
Q ss_pred EEEcCCCCEEEEEeCCCcEEEE--EcCCCcEEEEEccCCCcEEEE-EEe
Q 022910 242 LTISADSTLALSGSKDGSVHMV--NITTGKVVSSLVSHTDSIECI-GFS 287 (290)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~~w--d~~~~~~~~~~~~~~~~v~~i-~~s 287 (290)
++|+|+++++++++. +.+++| ++.+++ +..+..|...+..+ +++
T Consensus 299 ~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~ 345 (662)
T 3azo_A 299 FAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVS 345 (662)
T ss_dssp EEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEE
T ss_pred EeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecC
Confidence 899999999999998 999999 555454 67788887778776 444
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=2.4e-19 Score=160.78 Aligned_cols=228 Identities=15% Similarity=0.110 Sum_probs=164.0
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEe--cCCCcEEEEEccCCeeeeeeccccCCEE---------EEEEC--CCCCE-E
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATG--GGDDKGFFWRINQGDWASEIQGHKDSVS---------SLAFS--MDGQL-L 122 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~i~---------~~~~~--~~~~~-l 122 (290)
...+.+|...|..++|++ +..++++. +.++...||....+.....+..+...+. ...|+ |++++ |
T Consensus 16 ~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 16 AALVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 456788999999999998 66666666 5678999999655555556665665555 56565 99998 7
Q ss_pred EEEeC-CCcEEEEcCC--C-CceEEEEec-----CCCCEEEEEEcCCCCEEEEeeCC----------CeEEEEECCc---
Q 022910 123 ASGGL-DGLVQIWDPS--S-GNLKCTLEG-----PGGGVEWVSWHPRGHIVLAGSED----------STVWMWNADR--- 180 (290)
Q Consensus 123 ~~~~~-dg~i~i~d~~--~-~~~~~~~~~-----~~~~i~~i~~~~~~~~l~~~~~d----------g~i~i~d~~~--- 180 (290)
+.++. +..|.++++. . +. ...+.. +...+..++|+|+|+.|++++.+ ..|++|++.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 76654 5677777776 3 44 344444 45678899999999999998876 5899999988
Q ss_pred ---ccEEEeee-cCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEcCC-CC---eeeEEEeCCCCcccCeEEEEE
Q 022910 181 ---AAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDD--------ATLRVWNPK-SG---ENIHVIRGHPYHTEGLTCLTI 244 (290)
Q Consensus 181 ---~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~~~~v~~~~~ 244 (290)
++. ..+. .+...+..++|+|+|++|+.++.+ ..|++||+. ++ +....... +...+..+.|
T Consensus 174 ~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~~~~~~~~~~ 249 (662)
T 3azo_A 174 ADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---PEEAIAQAEW 249 (662)
T ss_dssp TCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---TTBCEEEEEE
T ss_pred ccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---CCceEcceEE
Confidence 554 3444 455678889999999999877754 379999998 56 33333332 4577899999
Q ss_pred cCCCCEEEEEeCCC--cEEEEEcCCCcEEEEEccCCCc--------EEEEEEecCC
Q 022910 245 SADSTLALSGSKDG--SVHMVNITTGKVVSSLVSHTDS--------IECIGFSRSE 290 (290)
Q Consensus 245 ~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~--------v~~i~~s~d~ 290 (290)
+|+|++++++..++ .|++|++.+++.......+... +..++|+|++
T Consensus 250 spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~ 305 (662)
T 3azo_A 250 APDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANG 305 (662)
T ss_dssp CTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTS
T ss_pred CCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCC
Confidence 99999888888888 6777777677654433333221 4567777764
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=2.7e-18 Score=155.27 Aligned_cols=225 Identities=12% Similarity=0.074 Sum_probs=164.1
Q ss_pred cCCcCEEEEEECCCCCcEEEEecC-CC----cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCc------
Q 022910 62 GHSDEVYSVACSPTDATLVATGGG-DD----KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL------ 130 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------ 130 (290)
+|...+..++|+| ++++||.+.. .| .|++||+.+++.......+. .+..++|+|+|+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccc
Confidence 3555788999999 5666655433 33 89999999988765433222 3677999999999999888766
Q ss_pred ----------EEEEcCCCCce--EEEEec--CCCCEEEEEEcCCCCEEEEeeC-----CCeEEEEECCc------cc-EE
Q 022910 131 ----------VQIWDPSSGNL--KCTLEG--PGGGVEWVSWHPRGHIVLAGSE-----DSTVWMWNADR------AA-YL 184 (290)
Q Consensus 131 ----------i~i~d~~~~~~--~~~~~~--~~~~i~~i~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~-~~ 184 (290)
|++|++.+++. ...+.. +...+..+.|+|+|++|+.++. +..|++||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 99999988763 233332 3455789999999999888765 56899999986 43 35
Q ss_pred EeeecCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC
Q 022910 185 NMFSGHGSSVTCGDFTPDGKTICTGSDD----ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (290)
Q Consensus 185 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (290)
..+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+. ....+..+.|++++.++++...++
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEETTTEEEEEEEETT
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEEcCCEEEEEEEECC
Confidence 555556555554 488888888766553 3699999987642 34444321 113578899998888888888888
Q ss_pred --cEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 259 --SVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 259 --~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.|++|++.+++.+..+..+.+.|..++++|++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence 46777877888888888888889999998874
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=2e-19 Score=150.87 Aligned_cols=230 Identities=16% Similarity=0.129 Sum_probs=157.6
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEE--ECCCCCEEEEE--------
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLA--FSMDGQLLASG-------- 125 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~-------- 125 (290)
......+|...+..++|+| ++..|+.++.++.|++|++.+++....+..+...+.... ++|++++++..
T Consensus 72 ~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 72 ATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWV 150 (388)
T ss_dssp EEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred eEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccc
Confidence 3344445555666788999 777788888889999999999887766665555554444 48999988743
Q ss_pred --------------eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcC-CCCEEEEeeCC------CeEEEEECCcccEE
Q 022910 126 --------------GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSED------STVWMWNADRAAYL 184 (290)
Q Consensus 126 --------------~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~ 184 (290)
..+..|++||+.+++..... .+...+..+.|+| +++.|+.+... ..|.++++..+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~ 229 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE
Confidence 23478999999998765444 4556789999999 99988877653 37888888766543
Q ss_pred EeeecCC--CCeEEEEEcCCCCEEEEEeC-CC----eEEEEcCCCCeeeEEEeCCCCccc---CeEEEEEcCCCCEEEEE
Q 022910 185 NMFSGHG--SSVTCGDFTPDGKTICTGSD-DA----TLRVWNPKSGENIHVIRGHPYHTE---GLTCLTISADSTLALSG 254 (290)
Q Consensus 185 ~~~~~~~--~~i~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~ 254 (290)
.+..+. ..+..++|+|+|+.|+..+. ++ .|++||+.+++....... ..+.. ....+.|+|+|+.|+..
T Consensus 230 -~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 230 -KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM-PACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp -ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE-CCEEEEEECTTSSEEEEEECCC---
T ss_pred -EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC-CCceeeeecCCCCeEccCCCcceeE
Confidence 333333 35788899999997755432 22 399999998875332221 11100 01123699999888754
Q ss_pred ---------eCCCcEEEEEcCCCcEEEEEccCCC-----------cEEEEEEecCC
Q 022910 255 ---------SKDGSVHMVNITTGKVVSSLVSHTD-----------SIECIGFSRSE 290 (290)
Q Consensus 255 ---------~~dg~i~~wd~~~~~~~~~~~~~~~-----------~v~~i~~s~d~ 290 (290)
..+..|++||+.+++. ..+..+.. .+.+++|+|||
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg 362 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDD 362 (388)
T ss_dssp ---------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred eeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCC
Confidence 4566899999988765 55555555 57889999986
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.83 E-value=6.7e-18 Score=135.15 Aligned_cols=205 Identities=12% Similarity=0.089 Sum_probs=165.6
Q ss_pred CcEEEEecCCCcEEEEEccCCeeeeeecccc-CCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCC-CCEEE
Q 022910 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG-GGVEW 154 (290)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~ 154 (290)
+++|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++|+ +.++.|+.||. +++.+..+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4788899999999999999999999998765 4788999999999888 34778999999 899998888653 46888
Q ss_pred EEEcCCCCEEEEeeC-CCeEEEEECCcccEEEeeec------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeE
Q 022910 155 VSWHPRGHIVLAGSE-DSTVWMWNADRAAYLNMFSG------HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIH 227 (290)
Q Consensus 155 i~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 227 (290)
+.+.++|+++++.+. ++.|..++. +++.+..+.. +......+++.++|+++++...++.|..||.. ++.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 999999999999887 788888886 6666665542 11234556789999999999999999999998 99888
Q ss_pred EEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC------CcEEEEEEecCC
Q 022910 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT------DSIECIGFSRSE 290 (290)
Q Consensus 228 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~~v~~i~~s~d~ 290 (290)
.+... ..+.++.+.+++++|++++.+++|..+|..+|+.+.++..+. ..+.+++..++|
T Consensus 160 ~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G 224 (276)
T 3no2_A 160 SVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNG 224 (276)
T ss_dssp EEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTS
T ss_pred EEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCC
Confidence 88752 345567788999999999888899999999999999986432 225666665554
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=3.4e-18 Score=142.58 Aligned_cols=198 Identities=15% Similarity=0.194 Sum_probs=141.5
Q ss_pred EEEEEECCCCCc--EEEEec-------------CCCcEEEEEcc-CCeeeeeec----cccCCEEEEEECCCCCEEEEEe
Q 022910 67 VYSVACSPTDAT--LVATGG-------------GDDKGFFWRIN-QGDWASEIQ----GHKDSVSSLAFSMDGQLLASGG 126 (290)
Q Consensus 67 v~~~~~~~~~~~--~l~~~~-------------~dg~i~iw~~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~ 126 (290)
+.+++|+| +++ +++++. .+|.+.+|++. .++....+. .+...+.+++|+|+|++|+++.
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 45688999 555 455553 68999999997 455544333 2456799999999999888775
Q ss_pred C-CCcEEEEcCC-CCceE--EEEe--cCCCCEEEEEEcCCCCEEEEeeC-CCeEEEEECC--cccEE---Eeeec-----
Q 022910 127 L-DGLVQIWDPS-SGNLK--CTLE--GPGGGVEWVSWHPRGHIVLAGSE-DSTVWMWNAD--RAAYL---NMFSG----- 189 (290)
Q Consensus 127 ~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~~----- 189 (290)
. ++.|++|++. +++.. ..+. .+...+..++|+|+++++++++. ++.|.+|++. +++.. ..+..
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 4 6799999998 67653 2333 23566999999999999888775 6899999865 45432 12221
Q ss_pred --CCC------CeEEEE-EcCCCCEEEEEeCCC------eEEEEcCC-CCeeeEE---EeCCCCcccCeEEEEEcC---C
Q 022910 190 --HGS------SVTCGD-FTPDGKTICTGSDDA------TLRVWNPK-SGENIHV---IRGHPYHTEGLTCLTISA---D 247 (290)
Q Consensus 190 --~~~------~i~~~~-~~~~~~~l~~~~~dg------~i~i~d~~-~~~~~~~---~~~~~~~~~~v~~~~~~~---~ 247 (290)
+.. .+..++ |+|+|++|+++..+. .|.+|++. +++.... +.. +...+..++|+| +
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~---~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT---PTSGGHSNAVSPCPWS 320 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC---SSCCTTCCCEEECTTC
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec---CCCCcccceecCCCcC
Confidence 121 488999 999999988765432 89999986 5554331 222 334456789999 8
Q ss_pred CCEEEEEeCC-CcEEEEEcCCC
Q 022910 248 STLALSGSKD-GSVHMVNITTG 268 (290)
Q Consensus 248 ~~~l~~~~~d-g~i~~wd~~~~ 268 (290)
|++|++++.+ +.|.+|++...
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 9999999874 89999998765
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=3e-19 Score=150.06 Aligned_cols=230 Identities=11% Similarity=0.011 Sum_probs=153.3
Q ss_pred CceeeeccCCcC-----EEEEEECCCCCcEEEEecCC--CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeC
Q 022910 55 DSTHIFSGHSDE-----VYSVACSPTDATLVATGGGD--DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL 127 (290)
Q Consensus 55 ~~~~~~~~h~~~-----v~~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 127 (290)
..+..+..+... +.+++|+|++..++++...+ ..|.+|++.+++.......+......+.|+|++++|+.++.
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 100 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN 100 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc
Confidence 344555554333 67889999444444444333 36888898887755443333222334789999999999999
Q ss_pred CCcEEEEcCCCCceEEEEecCCCCEEE-------------------EEEcCCCCEEEEe-----eCCCeEEEEECCcccE
Q 022910 128 DGLVQIWDPSSGNLKCTLEGPGGGVEW-------------------VSWHPRGHIVLAG-----SEDSTVWMWNADRAAY 183 (290)
Q Consensus 128 dg~i~i~d~~~~~~~~~~~~~~~~i~~-------------------i~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~ 183 (290)
++.|++|++.+++.......+...... +.|+|+++.++.+ ..+..|++||+.+++.
T Consensus 101 ~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL 180 (396)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE
T ss_pred CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE
Confidence 999999999998876666544442222 3467777766654 3567899999998876
Q ss_pred EEeeecCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC
Q 022910 184 LNMFSGHGSSVTCGDFTP-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
.... .+...+..+.|+| +++.|+..+.+ ..|.+|++..++. ..+... .....+..+.|+|+|++|+.++.
T Consensus 181 ~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 181 EVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEH-AEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCC-CTTEEEEEEEECTTSSCEEEEEE
T ss_pred Eeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeecc-CCCccccceEECCCCCEEEEEec
Confidence 5544 4567789999999 78877765543 4688999876543 333221 01335788999999998777654
Q ss_pred C-----CcEEEEEcCCCcEEEEEccCCCcEEEEEEec-CC
Q 022910 257 D-----GSVHMVNITTGKVVSSLVSHTDSIECIGFSR-SE 290 (290)
Q Consensus 257 d-----g~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~-d~ 290 (290)
+ +.|++||+.+++....... .. .. +.|+| ||
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg 294 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMVM-PP-CS-HLMSNFDG 294 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEEC-CS-EE-EEEECSSS
T ss_pred CCCCccceEEEEECCCCCeEEeeeC-CC-CC-CCccCCCC
Confidence 3 4499999988875443322 12 33 88988 75
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=2.8e-17 Score=135.07 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=156.2
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe-eeeee---------ccccCCEEEEEECC-CCCEEEEEe-CCC
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-WASEI---------QGHKDSVSSLAFSM-DGQLLASGG-LDG 129 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~dg 129 (290)
++-.....++++| ++.++++...++.|++|+..... .+..+ ..+......++++| ++..+++.+ .++
T Consensus 88 ~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 88 NLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 3445788999999 66788888889999999986542 34444 23445689999999 788777776 689
Q ss_pred cEEEEcCCCCceEEEEecCC----------CCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeee--cCCCCeEE
Q 022910 130 LVQIWDPSSGNLKCTLEGPG----------GGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTC 196 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~----------~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~ 196 (290)
.|++|+ .+++.+..+.... .....++++|+ +.++++...++.|++|+..+++.+..+. .+...+..
T Consensus 167 ~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 167 RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA 245 (329)
T ss_dssp EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE
T ss_pred eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce
Confidence 999999 5677776664322 23889999998 7777777788999999999888887774 35667889
Q ss_pred EEEcCCCCEEEEE-------eCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 197 GDFTPDGKTICTG-------SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 197 ~~~~~~~~~l~~~-------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
++|+| +..+++. ..+..|++|++.+++.+..+.....+...+..++++|+|.++++...+++|++|++.
T Consensus 246 ~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 246 ISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 99999 3333332 334589999999999888875333366778999999999888888889999999975
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1e-16 Score=128.92 Aligned_cols=201 Identities=13% Similarity=0.163 Sum_probs=151.5
Q ss_pred cCCcCEEEEEECCCCCcEEEEecC-CCcEEEEEccCCeeeeeec-cccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 022910 62 GHSDEVYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (290)
+|...+.++++.+.++.++++... ++.|++|+ .+++.+..+. .+...+.+++++|+++.+++...++.|.+|+.. +
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 151 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-G 151 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-C
Confidence 355678999994327777776643 78999999 5566666554 244578999999999988887778999999964 5
Q ss_pred ceEEEEe--cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecC--CCCeEEEEEcCCCCEEEEEeCCC-e
Q 022910 140 NLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--GSSVTCGDFTPDGKTICTGSDDA-T 214 (290)
Q Consensus 140 ~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-~ 214 (290)
+.+..+. .+...+..++++++++++++...++.|++|+.. ++.+..+... ...+..++++|+|+++++...++ .
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 5555554 344568999999999988887888999999974 4555555433 35789999999999888887776 9
Q ss_pred EEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 022910 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (290)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 268 (290)
|++|+. +++.+..+.... ....+..++++|+|+++++ +.+++|++|++...
T Consensus 231 i~~~~~-~g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 231 LTIFTQ-DGQLISALESKV-KHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEECT-TSCEEEEEEESS-CCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEECC-CCCEEEEEcccC-CCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999996 456666665422 2335789999999987776 57999999998654
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=4.3e-17 Score=129.85 Aligned_cols=220 Identities=9% Similarity=-0.016 Sum_probs=155.5
Q ss_pred CEEEEEECCCCCcEEE-EecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEE
Q 022910 66 EVYSVACSPTDATLVA-TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (290)
...++++.+ ++.+++ +...++.|.+|+..+.........+...+.++++.++++.+++.. ++.|.+|+.........
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 778999999 666777 557788999999766543332223335678899999998666655 88999999876554322
Q ss_pred EecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCe
Q 022910 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (290)
Q Consensus 145 ~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 224 (290)
.......+..++++++++++++...++.|.+|+..+.............+.+++++|+++++++...++.|.+|+.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 22233568999999999988877778899999876554333222333467889999999977777778899999988765
Q ss_pred eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 225 NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
....... ....+..++++++|.++++...++.|.+|+............+...+.+++++|+|
T Consensus 183 ~~~~~~~---~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 183 QVVLPFT---DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp EEECCCS---SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC
T ss_pred eEeeccc---CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC
Confidence 4332221 23668899999999888777778899999987655433222333578999999876
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=1.7e-17 Score=137.14 Aligned_cols=203 Identities=15% Similarity=0.210 Sum_probs=142.4
Q ss_pred cCEEEEEECCCCCcEEEEecCC---C--cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC-----------
Q 022910 65 DEVYSVACSPTDATLVATGGGD---D--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD----------- 128 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~d---g--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------- 128 (290)
..+..++|+| ++..|+.++.+ + .|.+|++.+++.......+ . +..++|+|++++|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 5688999999 55555555432 3 4788888887765544433 3 9999999999998888642
Q ss_pred ----------------CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCC---------eEEEEECCcccE
Q 022910 129 ----------------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS---------TVWMWNADRAAY 183 (290)
Q Consensus 129 ----------------g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~ 183 (290)
..|++|++.+++.+..+.. . .+..+.|+|++ +++++..++ .|++++ +++.
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~ 210 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE 210 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce
Confidence 5799999998877445544 3 68899999999 777775532 455555 4443
Q ss_pred EEeeecCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEcCCCCeeeEEEeCCCCcccCeEE-EEEcCCCCEEEEE
Q 022910 184 LNMFSGHGSSVTCGDFTPDGKTICTGSDD--------ATLRVWNPKSGENIHVIRGHPYHTEGLTC-LTISADSTLALSG 254 (290)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~ 254 (290)
..+..+ ..+..+ +|+|++|+.++.+ ..|.+|| +++....... +...+.. +.|+ ++ +++++
T Consensus 211 -~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 211 -EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDE---VDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp -EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTT---CCSEEEEEEEET-TE-EEEEE
T ss_pred -EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecccc---CCcccCCccEEc-Cc-EEEEE
Confidence 333334 455544 9999988877644 4788888 5543322222 4566775 8999 88 89999
Q ss_pred eCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 255 SKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 255 ~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
+.++.+++| +.+++... +..+.+.|.+++|+|
T Consensus 280 ~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 280 FEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE 311 (347)
T ss_dssp EETTEEEEE-EESSSEEE-EECSSSEEEEEEESS
T ss_pred ecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC
Confidence 999999999 87776644 444577899999986
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=2.5e-18 Score=144.45 Aligned_cols=224 Identities=14% Similarity=0.079 Sum_probs=152.0
Q ss_pred eeeccCCcCE-EEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEE-------------------EEECC
Q 022910 58 HIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSS-------------------LAFSM 117 (290)
Q Consensus 58 ~~~~~h~~~v-~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~-------------------~~~~~ 117 (290)
..+..+...+ ..+.|+| ++..|+.++.++.|++|++.+++.......+...... +.|+|
T Consensus 73 ~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp 151 (396)
T 3c5m_A 73 VQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP 151 (396)
T ss_dssp EECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC
Confidence 3343333333 3478999 6777777777889999999887765554433332222 35677
Q ss_pred CCCEEEEE-----eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcC-CCCEEEEeeCC------CeEEEEECCcccEEE
Q 022910 118 DGQLLASG-----GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSED------STVWMWNADRAAYLN 185 (290)
Q Consensus 118 ~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~ 185 (290)
++++++.+ ..+..|++||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+|++..++...
T Consensus 152 dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (396)
T 3c5m_A 152 LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK 230 (396)
T ss_dssp CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE
T ss_pred CCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE
Confidence 77766654 35678999999988766554 4556789999999 78877766543 468999987665333
Q ss_pred eeecC-CCCeEEEEEcCCCCEEEEEeCC-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC-CCCEEEEEe---
Q 022910 186 MFSGH-GSSVTCGDFTPDGKTICTGSDD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGS--- 255 (290)
Q Consensus 186 ~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--- 255 (290)
..... ...+..++|+|+|++|+.++.+ +.|++||+.+++....... . ... +.|+| +|++|++++
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~----~-~~~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM----P-PCS-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC----C-SEE-EEEECSSSSEEEEEECCC
T ss_pred eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC----C-CCC-CCccCCCCceEEEecCCc
Confidence 33321 2357889999999987766543 4599999988765443321 1 123 88999 999888765
Q ss_pred -------------CCCcEEEEEcCCCcEEEEEccCCC-----------cEEEEEEecCC
Q 022910 256 -------------KDGSVHMVNITTGKVVSSLVSHTD-----------SIECIGFSRSE 290 (290)
Q Consensus 256 -------------~dg~i~~wd~~~~~~~~~~~~~~~-----------~v~~i~~s~d~ 290 (290)
.++.|++||+.+++. ..+..+.. .+..++|+|||
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg 362 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPND 362 (396)
T ss_dssp ----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred ceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCC
Confidence 347899999988764 34444443 25677899886
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=7.4e-17 Score=132.58 Aligned_cols=217 Identities=11% Similarity=0.140 Sum_probs=158.6
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (290)
..|.+++|++ +...++..+.++.++.| .++....+..+...+.+++|++++++++++..++.|.+|+..+++....
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecC-CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 4577888998 55666666778899999 3455566666777789999999999888888899999999998876655
Q ss_pred EecCCCCEEEEEEcCCCCEEEEeeCC----CeEEEEECCcccEEEeee--cCCCCeEEEEEcCCCCEEEEEeC------C
Q 022910 145 LEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD------D 212 (290)
Q Consensus 145 ~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------d 212 (290)
...+...+.+++++|+++++++...+ +.|.+||..++.....+. .....+..++++|+++++++... .
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 54556779999999999988877766 689999998876543332 24457899999999987776654 3
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC-CcEEEE--------EccCCCcEE
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGSVHMVNITT-GKVVSS--------LVSHTDSIE 282 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~-~~~~~~--------~~~~~~~v~ 282 (290)
+.|..|+..+++...... ....+..++|+|++++|+ +.+.++.|++|++.+ ++.+.. +.++ ..+.
T Consensus 162 ~~l~~~~~~~~~~~~~~~----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPIIQ----NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp EEEEEECTTSCCEEEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred ceEEEEeCCCCEEEEeec----CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 678888876655433222 334578999999998654 445678999999964 332221 1222 4678
Q ss_pred EEEEecCC
Q 022910 283 CIGFSRSE 290 (290)
Q Consensus 283 ~i~~s~d~ 290 (290)
.++++++|
T Consensus 237 ~i~~d~~G 244 (333)
T 2dg1_A 237 SCCIDSDD 244 (333)
T ss_dssp EEEEBTTC
T ss_pred ceEECCCC
Confidence 88888875
No 182
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.78 E-value=1.7e-15 Score=122.59 Aligned_cols=225 Identities=12% Similarity=0.078 Sum_probs=159.9
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS 138 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 138 (290)
.+..+..-.-+..|+|.++.++++....+.|..|+..+++.. .+. ....+.+++++++++++++ . ++.|.+||..+
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCC
Confidence 344445556789999977888888888999999999877642 233 4567999999999995554 4 56799999988
Q ss_pred CceEEEEecC----CCCEEEEEEcCCCCEEEEeeC-----------CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCC
Q 022910 139 GNLKCTLEGP----GGGVEWVSWHPRGHIVLAGSE-----------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 139 ~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
++........ ...+..++++|+|+++++... .+.|+.++.. ++... +.........++|+|++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTS
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCC
Confidence 7654333321 234788999999997665432 2344444443 33322 22233456899999999
Q ss_pred CEEE-EEeCCCeEEEEcC--CCCeee--EEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC
Q 022910 204 KTIC-TGSDDATLRVWNP--KSGENI--HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT 278 (290)
Q Consensus 204 ~~l~-~~~~dg~i~i~d~--~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 278 (290)
+.|+ +.+..+.|.+|++ .++... ..+.........+..++++++|+++++....+.|.+|+..+++.+..+..+.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 8775 4556789999986 455431 2222221134567899999999888888778899999999999999998877
Q ss_pred CcEEEEEEe-cC
Q 022910 279 DSIECIGFS-RS 289 (290)
Q Consensus 279 ~~v~~i~~s-~d 289 (290)
..+++++|. |+
T Consensus 241 ~~~t~~~f~g~d 252 (297)
T 3g4e_A 241 DKTTSCCFGGKN 252 (297)
T ss_dssp SBEEEEEEESGG
T ss_pred CCceEEEEeCCC
Confidence 889999998 65
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=2.8e-17 Score=148.27 Aligned_cols=222 Identities=12% Similarity=0.068 Sum_probs=153.9
Q ss_pred cCCcCEEEEEECCCCCcEEE-----EecCCCcEEEEEccCCeee-ee-eccccCCEEEEEECCCCCEEEEEeCCCc----
Q 022910 62 GHSDEVYSVACSPTDATLVA-----TGGGDDKGFFWRINQGDWA-SE-IQGHKDSVSSLAFSMDGQLLASGGLDGL---- 130 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~-----~~~~dg~i~iw~~~~~~~~-~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~---- 130 (290)
+|...+.+++|+| ++++|| .|+.+..|++||+.+++.+ .. +.. .....++|+|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCc
Confidence 4666799999999 666665 3344568999999998765 21 211 11267899999999999988776
Q ss_pred ---------EEEEcCCCCce--EEEEe--cCCCCEEEEEEcCCCCEEEEeeCCC----eEEEEECCcccEEEeeecCCCC
Q 022910 131 ---------VQIWDPSSGNL--KCTLE--GPGGGVEWVSWHPRGHIVLAGSEDS----TVWMWNADRAAYLNMFSGHGSS 193 (290)
Q Consensus 131 ---------i~i~d~~~~~~--~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~ 193 (290)
|++|++.++.. ...+. .+...+..+.|+|+|++|++++.++ .|++|+..+++. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 99999988762 23333 3445788999999999988887666 677787655543 344445555
Q ss_pred eEEEEEcCCCCEEEEEe---CCCeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-C
Q 022910 194 VTCGDFTPDGKTICTGS---DDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT-T 267 (290)
Q Consensus 194 i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-~ 267 (290)
+....+ +++.+++.+. .++.|.+||+.++.. ...+..+. ....+..++|+ ++.++++...++..++|.+. +
T Consensus 274 ~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 274 KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 666666 5566444443 258999999987653 23333221 24457888888 67888888899988887654 4
Q ss_pred CcEEEEEccC-CCcEEEEEEecCC
Q 022910 268 GKVVSSLVSH-TDSIECIGFSRSE 290 (290)
Q Consensus 268 ~~~~~~~~~~-~~~v~~i~~s~d~ 290 (290)
++.+..+..+ .+.|..++++|++
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTC
T ss_pred CCeeEEecCCCCeEEEEeecCCCC
Confidence 6677777655 5677888888764
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.4e-14 Score=116.82 Aligned_cols=222 Identities=12% Similarity=0.122 Sum_probs=163.0
Q ss_pred eccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee-eccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC
Q 022910 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS 138 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 138 (290)
+..+...+.++++.+ ++.++++...++.|.+|+.. ++.... +..+...+.++++.+++..+++...++.|..|+..
T Consensus 10 ~~~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCSSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 445567899999999 66777776667899999988 543332 22345678999999999988777768889999986
Q ss_pred CceEEEEe--cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 022910 139 GNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (290)
Q Consensus 139 ~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 215 (290)
++. ..+. .....+..+++.++++++++...++.|.+|+. +++.... .......+..+++.++++++++....+.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 433 3333 24457899999999988888777889999998 5543322 22345678999999999888877778899
Q ss_pred EEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE-EccCCCcEEEEEEecCC
Q 022910 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS-LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~i~~s~d~ 290 (290)
.+||. +++... +... .....+..++++++++++++....+.|.+|+. +++.... +..+...+.+++++++|
T Consensus 165 ~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp EEECT-TCCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred EEEcC-CCcEEE-eeCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 99999 665433 2211 13456889999999998777777889999998 6664432 23345678999998875
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=2.5e-16 Score=131.04 Aligned_cols=200 Identities=11% Similarity=0.129 Sum_probs=138.4
Q ss_pred CCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeC----------CCcEEEEcCCCCceEEEEecC------
Q 022910 85 GDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL----------DGLVQIWDPSSGNLKCTLEGP------ 148 (290)
Q Consensus 85 ~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~------ 148 (290)
.++.|.+||..+++.+..+..+..+ .++|+|+++++++++. ++.|.+||+.+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3679999999999988888766655 8999999999998863 578999999999988887643
Q ss_pred CCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEcC----
Q 022910 149 GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNP---- 220 (290)
Q Consensus 149 ~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~---- 220 (290)
......++++|++++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|.+ ..+++.+.||.+.+|+.
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 234677999999999998874 57899999999988777 54211 1122334432 33344444444444443
Q ss_pred --------------------------------------------CCCee--eEEEeCCC-------CcccCeEEEEEcCC
Q 022910 221 --------------------------------------------KSGEN--IHVIRGHP-------YHTEGLTCLTISAD 247 (290)
Q Consensus 221 --------------------------------------------~~~~~--~~~~~~~~-------~~~~~v~~~~~~~~ 247 (290)
..... ...+.... ........++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 22211 00110000 00011112688999
Q ss_pred CCEEEEEeC-----------CCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 248 STLALSGSK-----------DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 248 ~~~l~~~~~-----------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
++.++++.. .+.|.+||+.+++.+.++..+. +.+|+|+|||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg 316 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQR 316 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTT
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCC
Confidence 887777643 3489999999999999999876 9999999986
No 186
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=1.8e-17 Score=150.47 Aligned_cols=176 Identities=12% Similarity=0.131 Sum_probs=134.8
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCC-----EEEEEEcCCCCEEEEeeCC---------CeEE
Q 022910 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-----VEWVSWHPRGHIVLAGSED---------STVW 174 (290)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----i~~i~~~~~~~~l~~~~~d---------g~i~ 174 (290)
....+.|+|++++++++ ++.|++|++.+++....+..+... ...+.|||+|++|++++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45679999999988886 899999999999988777766532 2347899999999998875 6678
Q ss_pred EEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCccc-----------------
Q 022910 175 MWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTE----------------- 237 (290)
Q Consensus 175 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----------------- 237 (290)
+||+.+++.. .+..+...+...+|||+|+.|+.+. ++.|++|++.++...+..... +..
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g--~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG--KEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC--BTTTEEESBCCHHHHHHTSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC--CccceecCcccccccchhcC
Confidence 9999998754 4566778899999999999998875 689999999887754322111 111
Q ss_pred CeEEEEEcCCCCEEEEEeCCC------------------------------------cEEEEEcCC---Cc--EEEEEc-
Q 022910 238 GLTCLTISADSTLALSGSKDG------------------------------------SVHMVNITT---GK--VVSSLV- 275 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~~wd~~~---~~--~~~~~~- 275 (290)
....+.|||||++||.++.|. .|++||+.+ ++ ....+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 123589999999999875321 588999988 73 233343
Q ss_pred -----cCCCcEEEEEEecCC
Q 022910 276 -----SHTDSIECIGFSRSE 290 (290)
Q Consensus 276 -----~~~~~v~~i~~s~d~ 290 (290)
+|...+..++|||||
T Consensus 252 ~~~~~~~~~~~~~~~wspdg 271 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQE 271 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETT
T ss_pred CccCCCCCeEEEEEEEeCCC
Confidence 377789999999997
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=6.3e-16 Score=126.93 Aligned_cols=215 Identities=12% Similarity=0.034 Sum_probs=161.0
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (290)
.....+++. +++++++...++.|.+||..+++.+.++. .......++++++++.+++...++.|.+||+.+++....
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 345677774 55677777778999999999999888885 346688999988885444444789999999999988877
Q ss_pred EecCC-----CCEEEEEEcCCCCEEEEee--CCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCC-----
Q 022910 145 LEGPG-----GGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD----- 212 (290)
Q Consensus 145 ~~~~~-----~~i~~i~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----- 212 (290)
+.... .....+++ ++..++++. .++.|.++|+.+++.+..+.. ......++++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCc
Confidence 76433 13556777 344455544 488999999999988877764 3445788999999877776654
Q ss_pred -----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE--EccCCCcEEEEE
Q 022910 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS--LVSHTDSIECIG 285 (290)
Q Consensus 213 -----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~--~~~~~~~v~~i~ 285 (290)
+.|.+||..+++....+... .......++|+|++++|+++.. .|.+||+.+++.... +........+|+
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~--~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFK--LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECC--TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred cccCCceEEEEECCCCeEEEEEecC--CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 78999999999877666532 1346889999999999988765 899999998876421 122245788999
Q ss_pred EecC
Q 022910 286 FSRS 289 (290)
Q Consensus 286 ~s~d 289 (290)
++|+
T Consensus 274 vdp~ 277 (328)
T 3dsm_A 274 VNPN 277 (328)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 9984
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=2.9e-16 Score=129.70 Aligned_cols=202 Identities=11% Similarity=0.146 Sum_probs=140.7
Q ss_pred cCEEEEEECCCCCcEEEEe--------cCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC---C--cE
Q 022910 65 DEVYSVACSPTDATLVATG--------GGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD---G--LV 131 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g--~i 131 (290)
..+..+++ ++..++++. ..++.|.+|++.+++... + ..+..++|+|+|++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 35667777 355544442 125679999998876433 3 467889999999999887754 2 48
Q ss_pred EEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCC---------------------------CeEEEEECCcccEE
Q 022910 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED---------------------------STVWMWNADRAAYL 184 (290)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---------------------------g~i~i~d~~~~~~~ 184 (290)
.+|++.+++.......+ . +..++|+|+++.|+.++.+ ..|++|++.+++.+
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88898888766555444 3 9999999999988887642 57999999988764
Q ss_pred EeeecCCCCeEEEEEcCCCCEEEEEeCCC---------eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe
Q 022910 185 NMFSGHGSSVTCGDFTPDGKTICTGSDDA---------TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 185 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
..+.. . .+..+.|+|+| +++++..++ .|.++| +++. ..+.. + ..+..+ +|+|++|+.++
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~---~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFE---K-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEE---E-ESEEEE--EECSSCEEEEE
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEecc---C-cceeeE--CCCCCEEEEEE
Confidence 55554 3 78899999999 777776542 455556 5543 33332 2 344443 89999888777
Q ss_pred CC--------CcEEEEEcCCCcEEEEEccCCCcEEE-EEEecCC
Q 022910 256 KD--------GSVHMVNITTGKVVSSLVSHTDSIEC-IGFSRSE 290 (290)
Q Consensus 256 ~d--------g~i~~wd~~~~~~~~~~~~~~~~v~~-i~~s~d~ 290 (290)
.+ ..|++|| +++.......+...+.. +.|+ ||
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg 274 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK 274 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE
T ss_pred ccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc
Confidence 54 3688888 66655545566778886 8887 64
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.75 E-value=2e-15 Score=122.74 Aligned_cols=227 Identities=8% Similarity=0.074 Sum_probs=159.6
Q ss_pred eeccCCcCEEEEEECCCCCcEEEE-------ecCCCcEEEEEccCCeeeeeec----cccCCEEEEEECCC-CCEEEEEe
Q 022910 59 IFSGHSDEVYSVACSPTDATLVAT-------GGGDDKGFFWRINQGDWASEIQ----GHKDSVSSLAFSMD-GQLLASGG 126 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~----~~~~~i~~~~~~~~-~~~l~~~~ 126 (290)
.+...-....+++|.+ ++.++++ +..++.|.+|+..+++...... ++...+.+++++++ ++++++.
T Consensus 12 ~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~- 89 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD- 89 (314)
T ss_dssp EEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-
T ss_pred hhhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-
Confidence 3444555678999998 6677777 5678899999988776543221 25567899999999 6544444
Q ss_pred CCCcEEEEcCCCCceEEE-Eec----CCCCEEEEEEcCCCCEEEEeeCC---------------CeEEEEECCcccEEEe
Q 022910 127 LDGLVQIWDPSSGNLKCT-LEG----PGGGVEWVSWHPRGHIVLAGSED---------------STVWMWNADRAAYLNM 186 (290)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~-~~~----~~~~i~~i~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~ 186 (290)
..+.|.+|+.. ++.... ... ....+.+++++++++++++...+ +.|..|+.. ++....
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 44579999988 665433 221 12347899999999888777654 568888766 544333
Q ss_pred eecCCCCeEEEEEc----CCCCEEEEE-eCCCeEEEEcCC-CCeee--EEEeCCCCcc-cCeEEEEEcCCCCEEEEEeCC
Q 022910 187 FSGHGSSVTCGDFT----PDGKTICTG-SDDATLRVWNPK-SGENI--HVIRGHPYHT-EGLTCLTISADSTLALSGSKD 257 (290)
Q Consensus 187 ~~~~~~~i~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d 257 (290)
. .+......++|+ |+++.|+++ ..++.|.+|++. +++.. ..+.....+. ..+..++++++|+++++...+
T Consensus 168 ~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 168 D-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp E-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred c-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 2 233456889999 998766555 567899999976 44321 1222211122 557889999999988888788
Q ss_pred CcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 258 GSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 258 g~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
+.|.+|+..+++.+..+..+...+.+++|+|+|
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg 279 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECTTS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCC
Confidence 999999998788777777777889999999875
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=3.8e-15 Score=119.14 Aligned_cols=226 Identities=14% Similarity=0.084 Sum_probs=173.5
Q ss_pred CCCceeeeccCC-cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccc-cCCEEEEEECCCCCEEEEEeC-CC
Q 022910 53 PDDSTHIFSGHS-DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH-KDSVSSLAFSMDGQLLASGGL-DG 129 (290)
Q Consensus 53 ~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-dg 129 (290)
..+.+..+..+. ..+.++++.| ++++|++ .++.|..||. +++.+..+..+ ...+.++.+.++|+.+++.+. .+
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~p-dG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATK-AGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECT-TSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CCeEEEEeCCCccCCCcCeEECC-CCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence 466677777766 5789999999 6777773 4688999999 88888888764 357889999999999999887 77
Q ss_pred cEEEEcCCCCceEEEEecC------CCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCC
Q 022910 130 LVQIWDPSSGNLKCTLEGP------GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (290)
.|..++. +++.+..+... ......+++.++++++++...++.|..||.. ++.+.++... ..+.++.+.+++
T Consensus 100 ~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g 176 (276)
T 3no2_A 100 TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNG 176 (276)
T ss_dssp EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTS
T ss_pred EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCC
Confidence 8888885 67777666522 1234556788999999999999999999998 9888888754 445667888999
Q ss_pred CEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC---cccCeEEEEEcCCCCEEEEEeCC--------CcEEEEEc-CCCcEE
Q 022910 204 KTICTGSDDATLRVWNPKSGENIHVIRGHPY---HTEGLTCLTISADSTLALSGSKD--------GSVHMVNI-TTGKVV 271 (290)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~wd~-~~~~~~ 271 (290)
+++++++.++.|..+|..+++.+..+..... ....+..++..++|+++++.... +..+++.+ .+++.+
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 256 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 256 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEE
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEE
Confidence 9999999888999999999999888864211 12337888999999998887421 23356666 589999
Q ss_pred EEEccCC--CcEEEEE
Q 022910 272 SSLVSHT--DSIECIG 285 (290)
Q Consensus 272 ~~~~~~~--~~v~~i~ 285 (290)
.++..+. +.|++++
T Consensus 257 W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 257 WQLNDKVKFGMISTIC 272 (276)
T ss_dssp EEECCTTTSCCCCEEE
T ss_pred EEecCcccccceeeee
Confidence 9987653 4566654
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.3e-15 Score=123.57 Aligned_cols=223 Identities=9% Similarity=-0.014 Sum_probs=162.3
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecccc-----CCEEEEEECCCCCEEEEEe--
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK-----DSVSSLAFSMDGQLLASGG-- 126 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-- 126 (290)
.+.+..+. .......+++++ ++.++++...++.|.+||..+++....+.... .....+++ ++..++++.
T Consensus 74 ~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~ 149 (328)
T 3dsm_A 74 FKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS 149 (328)
T ss_dssp CCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT
T ss_pred cEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC
Confidence 34445553 346788999988 55666666578999999999998877665332 14456777 455555554
Q ss_pred CCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCC----------CeEEEEECCcccEEEeeecC-CCCeE
Q 022910 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----------STVWMWNADRAAYLNMFSGH-GSSVT 195 (290)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~i~ 195 (290)
.++.|.++|+.+++.+..+.... ....++++|++++++++..+ +.|.++|..+++....+... ...+.
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred CCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 48899999999999888776533 35789999999977777654 78999999998877766532 34689
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC-CCCEEEEE----eCCCcEEEEEcCCCcE
Q 022910 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSG----SKDGSVHMVNITTGKV 270 (290)
Q Consensus 196 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~----~~dg~i~~wd~~~~~~ 270 (290)
.++|+|++++|+++.. .|.+||+.+++.... ............++++| ++.++++. ..++.|.+|+.. ++.
T Consensus 229 ~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN--DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp EEEECTTSCEEEEESS--SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred eEEEecCCCEEEEEcc--EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 9999999999988765 899999988775311 11111145688999999 55666665 568899999998 999
Q ss_pred EEEEccCCCcEEEEEE
Q 022910 271 VSSLVSHTDSIECIGF 286 (290)
Q Consensus 271 ~~~~~~~~~~v~~i~~ 286 (290)
+.++.. ......++|
T Consensus 305 ~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 305 IDEFYV-GIIPGAFCW 319 (328)
T ss_dssp EEEEEE-EESEEEEEE
T ss_pred EEEEEe-ccCcceEEE
Confidence 998875 334556655
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=1.4e-15 Score=121.00 Aligned_cols=201 Identities=9% Similarity=-0.006 Sum_probs=148.7
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
...+.++++.+ ++.++++.. ++.|.+|+................+..+++.++++.+++...++.|.+|+..+.....
T Consensus 66 ~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 66 LYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp CCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred cCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 35678899999 566666665 8899999987654332222233578999999999977777778899999876655433
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCC
Q 022910 144 TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (290)
Q Consensus 144 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 223 (290)
........+..++++++++++++...++.|.+|+................+.+|+++++|.++++...++.|.+|+....
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 32233345788999999997777777889999999877654433333467899999999987777777889999998765
Q ss_pred eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 022910 224 ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (290)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 269 (290)
... .... .+...+.+++++++|+++++...++.|++|++...+
T Consensus 224 ~~~-~~~~--~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 224 TST-VLPF--TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCE-ECCC--CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred cce-eecc--CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 432 2221 123568999999999988888899999999987654
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=6.9e-14 Score=112.67 Aligned_cols=218 Identities=10% Similarity=0.028 Sum_probs=158.7
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee-eeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCce
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (290)
+...+.++++.+ ++.++++...++.|..|+.. ++. ...+......+..+++.+++.++++...++.|.+|+. +++.
T Consensus 55 ~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 456789999999 66777777768889999976 332 2222234557899999999988887777889999998 5554
Q ss_pred EEE-EecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEc
Q 022910 142 KCT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (290)
Q Consensus 142 ~~~-~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 219 (290)
... .......+..+++.++++++++....+.|..|+. +++.... .......+..+++.++++++++....+.|.+|+
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 432 2224456899999999988887777889999999 6654432 233455688999999999777776788999999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEE--ccCCCcEEEEEEecCC
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL--VSHTDSIECIGFSRSE 290 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~i~~s~d~ 290 (290)
. ++... .+... .....+.+++++++|+++++...++.|.+|+. +++. ..+ ..+...+.++++ ++|
T Consensus 211 ~-~g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 211 T-SGEIT-EFKIP-TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGE 277 (299)
T ss_dssp T-TCCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSS
T ss_pred C-CCcEE-EEECC-CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCC
Confidence 9 66543 33221 14467899999999987777667889999998 4543 333 344567888888 664
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=9.9e-15 Score=127.72 Aligned_cols=212 Identities=12% Similarity=0.059 Sum_probs=157.3
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC--CCceEEEEecCCCCEE
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS--SGNLKCTLEGPGGGVE 153 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~i~ 153 (290)
+..++++...++.|.++|..+++.+..+... ..+..+.|+|+++++++++.++.|.+||+. +++.+..+.... ...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 4567778888999999999999998888743 356799999999999999999999999996 888887777543 468
Q ss_pred EEEEc----CCCCEEEEeeC-CCeEEEEECCcccEEEeeecC--------------------------------------
Q 022910 154 WVSWH----PRGHIVLAGSE-DSTVWMWNADRAAYLNMFSGH-------------------------------------- 190 (290)
Q Consensus 154 ~i~~~----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-------------------------------------- 190 (290)
.++|+ |+|++++++.. .+.|.++|..+.+.+..+...
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 89999 69998887765 589999999888776654311
Q ss_pred -----------------CCCeEEEEEcCCCCEEEEEe-CCCeEEEEcCCCCeeeEEEeC-CC-CcccCeEEEEEcCCC-C
Q 022910 191 -----------------GSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGENIHVIRG-HP-YHTEGLTCLTISADS-T 249 (290)
Q Consensus 191 -----------------~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~-~ 249 (290)
......+.|+|++++|+++. .++.|.++|+.+++.+..+.. .. .|......+ ++|++ .
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~ 402 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGP 402 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCc
Confidence 01123567999999887665 578999999999988777654 21 233222222 57874 4
Q ss_pred EEEEEe-CCCcEEEEEcCC-------CcEEEEEccCCCcEEEEEEecCC
Q 022910 250 LALSGS-KDGSVHMVNITT-------GKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 250 ~l~~~~-~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.++++. .++.|.+++..+ .+.++++......-..|.++|++
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~ 451 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS 451 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCC
Confidence 445553 468999999988 77889888654443446667764
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=7.3e-15 Score=118.68 Aligned_cols=203 Identities=13% Similarity=0.119 Sum_probs=147.7
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccc----cCCEEEEEECCCCCEEEEE----e--
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH----KDSVSSLAFSMDGQLLASG----G-- 126 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~----~-- 126 (290)
...+..+...+.+++++| ++.++++...++.|.+|+..+++........ ...+..++++|+|+++++. +
T Consensus 61 ~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~ 139 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDK 139 (296)
T ss_dssp EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHC
T ss_pred eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccc
Confidence 566677788899999999 6778877777789999999877654433211 2346789999999988873 2
Q ss_pred -----------CCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECC-cccE---EEeeecCC
Q 022910 127 -----------LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAY---LNMFSGHG 191 (290)
Q Consensus 127 -----------~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~ 191 (290)
..+.|..++.. ++ ...+..+......++|+|+++.+++.+.++.|++|++. .++. ...+..+.
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 217 (296)
T 3e5z_A 140 PEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEP 217 (296)
T ss_dssp GGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSS
T ss_pred ccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCC
Confidence 13466666655 44 34445556678999999999988777788999999987 4443 23333345
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEE-cCCCCEEEEEeCCCcEEEEEcCCCcE
Q 022910 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI-SADSTLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 192 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
..+..++++++|+++++. ++.|.+|+.. ++.+..+.. +.. +++++| .|+++.|++++.+ .+..++..+.++
T Consensus 218 ~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~---~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT---PQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC---SSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred CCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC---CCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 567789999999866665 7899999986 676666665 334 888999 5899988888876 466667766553
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.73 E-value=3.1e-16 Score=130.11 Aligned_cols=175 Identities=11% Similarity=-0.003 Sum_probs=136.0
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCe---------eee-eeccccCCEEEEEECCCCCEEEEEeCCCcEEEEc
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD---------WAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (290)
+++.+++++ ...++++|+.+ .+++|++...+ ... ....+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999 66677788776 46669976543 111 1223556 999999 89999998 789999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 022910 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 215 (290)
+.+.........+..++.++.+.+. .+++++.+|.|.+|++..+.... +...|++++|+|.| ++.|..||.|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9888766667777778888877654 38889999999999999877653 34589999999999 7889999999
Q ss_pred EEEcCCCCee--eEEEeCCC------CcccCeEEEEEcCCCCEEEEE
Q 022910 216 RVWNPKSGEN--IHVIRGHP------YHTEGLTCLTISADSTLALSG 254 (290)
Q Consensus 216 ~i~d~~~~~~--~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~ 254 (290)
++|+...+.. ...+...+ .+...|.+++|.+++.+|++-
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999887774 45552211 256789999999999988874
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.72 E-value=7.8e-14 Score=114.33 Aligned_cols=219 Identities=15% Similarity=0.065 Sum_probs=154.6
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
..-..+.+|+|+++.++++...++.|.+|+..+++... +. ....+.+++|+++++++++. .+ .|.+|+..+++...
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTL 123 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEE
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEE
Confidence 33457889999667888888888999999998776432 32 34679999999999877654 34 49999998887543
Q ss_pred EEecC----CCCEEEEEEcCCCCEEEEeeC------CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCC
Q 022910 144 TLEGP----GGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDD 212 (290)
Q Consensus 144 ~~~~~----~~~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d 212 (290)
..... ...+..++++|+|+++++... .+.|+.++ +++.. .+.........++|+|+++.|+.+ +.+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 33211 235889999999997665542 25666666 44433 232233456789999999877554 457
Q ss_pred CeEEEEcCC--CC-ee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEe
Q 022910 213 ATLRVWNPK--SG-EN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFS 287 (290)
Q Consensus 213 g~i~i~d~~--~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s 287 (290)
+.|.+|++. ++ .. ...+.........+..++++++|.++++...++.|.+|+. +++.+..+..+...+++++|+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999985 55 32 1222211112345678999999988877767789999998 688888888777789999998
Q ss_pred -cCC
Q 022910 288 -RSE 290 (290)
Q Consensus 288 -~d~ 290 (290)
|++
T Consensus 280 g~d~ 283 (326)
T 2ghs_A 280 GPDA 283 (326)
T ss_dssp STTS
T ss_pred cCCC
Confidence 763
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.71 E-value=2.5e-14 Score=120.84 Aligned_cols=220 Identities=14% Similarity=0.114 Sum_probs=156.0
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCC--cEEEEcCCCCceE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLK 142 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~ 142 (290)
.....|+|++ ++.++++...++.|++|+..++.......... ... ++|+++++.|+++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4678999998 77788888888999999998877665554332 233 99999999998888766 7999988766554
Q ss_pred EEE----ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEe----eecCCCCe-E-EEEEcCC-CCEEEEEeC
Q 022910 143 CTL----EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM----FSGHGSSV-T-CGDFTPD-GKTICTGSD 211 (290)
Q Consensus 143 ~~~----~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~i-~-~~~~~~~-~~~l~~~~~ 211 (290)
..+ ......+.+++++|++..|+++..++.|+.|+..++..... ..+....- . .++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 444 21445678899999655566677789999999987753322 22222222 3 8999995 555566667
Q ss_pred CCeEEEEcCCCCeeeEEEeCCC------------CcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEEccC-
Q 022910 212 DATLRVWNPKSGENIHVIRGHP------------YHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVVSSLVSH- 277 (290)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~- 277 (290)
.+.|+.|+.... ...+.+.. ..-.....++++|+|+++++-+ .+++|+.|++.+++. .++.++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 889999998643 23333211 0123478999999999888877 889999999877764 444443
Q ss_pred --------------CCcEEEEEEecCC
Q 022910 278 --------------TDSIECIGFSRSE 290 (290)
Q Consensus 278 --------------~~~v~~i~~s~d~ 290 (290)
-....+|+++|+|
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCC
Confidence 2458899998875
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=4.2e-15 Score=134.99 Aligned_cols=221 Identities=13% Similarity=0.027 Sum_probs=150.6
Q ss_pred CCcCEEEEEECCCCCcEEEEecC-C----CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCc-------
Q 022910 63 HSDEVYSVACSPTDATLVATGGG-D----DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL------- 130 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------- 130 (290)
|...+..++|+| ++++||.+.. . ..|++||+.+++.+.... +...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 445788999999 5555555433 2 359999999988754321 2222357899999 98888876654
Q ss_pred -------EEEEcCCCCce--EEEEec--CCCCEEEEEEcCCCCEEEEeeCCC-----eEEEEECCcc--cEEEeeecCCC
Q 022910 131 -------VQIWDPSSGNL--KCTLEG--PGGGVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRA--AYLNMFSGHGS 192 (290)
Q Consensus 131 -------i~i~d~~~~~~--~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~ 192 (290)
|++|++.++.. ...+.. +...+..+.|+|+|++|+..+.++ .|++||+.++ +....+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999987752 233333 223588999999999888877544 8999999876 31444544544
Q ss_pred CeEEEEEcCCCCEEEEEeC----CCeEEEEcCCCCe-eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-
Q 022910 193 SVTCGDFTPDGKTICTGSD----DATLRVWNPKSGE-NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT- 266 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~- 266 (290)
.+.... +|+++.|+..+. .+.|.+||+.++. ....+... +...+..+.|+ ++.++++...++..++|.+.
T Consensus 318 ~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 318 AQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE--SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp SCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC--CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET
T ss_pred ceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC--CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 555543 488888887765 3469999998752 33333322 34456777887 66788888889877777554
Q ss_pred CCcEEEEEccC-CCcEEEEEEecCC
Q 022910 267 TGKVVSSLVSH-TDSIECIGFSRSE 290 (290)
Q Consensus 267 ~~~~~~~~~~~-~~~v~~i~~s~d~ 290 (290)
+++.+..+..+ .+.|..++++|++
T Consensus 394 ~g~~~~~l~~~~~~~v~~~~~s~d~ 418 (741)
T 1yr2_A 394 DGKPAGAVSLPGIGSASGLSGRPGD 418 (741)
T ss_dssp TSCEEEECBCSSSCEEEEEECCBTC
T ss_pred CCCceeeccCCCCeEEEEeecCCCC
Confidence 56677777653 5788999999875
No 200
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.70 E-value=2e-14 Score=116.77 Aligned_cols=226 Identities=12% Similarity=0.084 Sum_probs=157.7
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
...+..+..+........|+|++..+++++..++.|..|+. +++ ...+..+...+..++++++|+++++....+.|.+
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 34555666666778899999955558888888999999988 444 3444445677899999999997766666688999
Q ss_pred EcCCCCceEEEEecC----CCCEEEEEEcCCCCEEEE----eeC-------------CCeEEEEECCcccEEEeeecCCC
Q 022910 134 WDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLA----GSE-------------DSTVWMWNADRAAYLNMFSGHGS 192 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~ 192 (290)
|+.. ++........ ...+..++++|+|+++++ |.. .+.|+.|+..+++..... ...
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 9986 5543222111 124677999999998886 432 356888887666544333 334
Q ss_pred CeEEEEEcCCCCEEEEEeCC------CeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 193 SVTCGDFTPDGKTICTGSDD------ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
....++|+|+++.|+++... +.|++|++..+.. ...+... .......++++++|++++ ++.+ .|.+|+
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~ 264 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGGWLWS-SSGT-GVCVFD 264 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTSCEEE-CCSS-EEEEEC
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCCCEEE-ecCC-cEEEEC
Confidence 56889999999988877665 7899999876541 1122111 233456789999998554 4444 599999
Q ss_pred cCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 265 ITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 265 ~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
. .++.+..+..+. .+.+++|+|++
T Consensus 265 ~-~g~~~~~~~~~~-~~~~~~f~~d~ 288 (305)
T 3dr2_A 265 S-DGQLLGHIPTPG-TASNCTFDQAQ 288 (305)
T ss_dssp T-TSCEEEEEECSS-CCCEEEECTTS
T ss_pred C-CCCEEEEEECCC-ceeEEEEeCCC
Confidence 7 688888887655 58899998764
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.69 E-value=5.3e-13 Score=107.48 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=161.6
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee-eeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (290)
......+.++++.+ ++.++++...++.|.+|+.. ++... .+......+.++++.++++.+++...++.|..|+.. +
T Consensus 16 ~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 16 SIPDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34456889999999 67777777778999999987 55433 223334678999999999877777667889999988 5
Q ss_pred ceEEEEe--cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEE-eeecCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 022910 140 NLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN-MFSGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (290)
Q Consensus 140 ~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 216 (290)
+.. .+. .....+..+++.++++++++...++.|..|+.. ++... .+......+..+++.++++++++....+.|.
T Consensus 93 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 543 332 234568999999999988887778899999987 55432 2333456789999999999777766688999
Q ss_pred EEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE-EccCCCcEEEEEEecCC
Q 022910 217 VWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS-LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 217 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~i~~s~d~ 290 (290)
.|+. +++... +.. ......+..+++++++.++++....+.|.+|+. +++.... +..+...+.+|+++++|
T Consensus 171 ~~~~-~g~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 171 RITN-TGKLEE-YPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp EECT-TCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred EECC-CCcEEE-eeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCC
Confidence 9998 555433 322 113456889999999988877777788999998 5554443 33345678899998875
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.69 E-value=1.2e-15 Score=126.47 Aligned_cols=165 Identities=12% Similarity=0.102 Sum_probs=131.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc-----------eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEE
Q 022910 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN-----------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (290)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d 177 (290)
+++.+++++...++++|+.++ +++|++.... ...... +.. |++++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999999999999875 6669864322 222333 455 999999 89999999 789999999
Q ss_pred CCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC
Q 022910 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (290)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 257 (290)
+++.........+..++..+.+.+. .+++++.||.|.+||+.++.... +...|++++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEEEcC
Confidence 9887766666677788888887764 38888999999999999877542 34579999999999 6789999
Q ss_pred CcEEEEEcCCCcE--EEEE------c---cCCCcEEEEEEecCC
Q 022910 258 GSVHMVNITTGKV--VSSL------V---SHTDSIECIGFSRSE 290 (290)
Q Consensus 258 g~i~~wd~~~~~~--~~~~------~---~~~~~v~~i~~s~d~ 290 (290)
|.|++|+...+.. .+++ . +|...|.+|.|.+++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 9999999877775 5666 2 367899999998764
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.68 E-value=4.9e-13 Score=107.70 Aligned_cols=220 Identities=9% Similarity=0.059 Sum_probs=157.2
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee-eeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCce
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (290)
+...+.++++.+ ++.++++...++.|..|+.. ++... .+......+.++++.++++++++...++.|..++.. ++.
T Consensus 60 ~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 60 PDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 346789999998 66777777667889999987 54432 222234678999999999888777768899999987 554
Q ss_pred EEE-EecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEc
Q 022910 142 KCT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (290)
Q Consensus 142 ~~~-~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 219 (290)
... +......+..+++.++++++++....+.|..|+. +++.... .......+..+++.++++++++....+.|.+|+
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 422 2223457899999999997777766789999998 5544332 223445689999999998777777778899999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE-EccCCCcEEEEEEecCC
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS-LVSHTDSIECIGFSRSE 290 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~i~~s~d~ 290 (290)
. ++.... +... .....+.+++++++|+++++...++.|..|+. +++.... +......+.++++.++|
T Consensus 216 ~-~g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 216 T-TGEISE-YDIP-TPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp T-TCCEEE-EECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTS
T ss_pred C-CCcEEE-EECC-CCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCC
Confidence 8 444333 2211 13466889999999987777767789999998 4554322 33334567888888765
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.67 E-value=1.7e-13 Score=119.91 Aligned_cols=228 Identities=11% Similarity=0.062 Sum_probs=159.6
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEcc--CCeeeeeeccccCCEEEEEEC----CCCCEEEEEeC-C
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFS----MDGQLLASGGL-D 128 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~-d 128 (290)
.+..+.. ...+..+.|+| +++++++++.++.|.+||+. +++.+..+.... ....++|+ |+|+++++++. .
T Consensus 189 v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~ 265 (567)
T 1qks_A 189 IKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWP 265 (567)
T ss_dssp EEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEET
T ss_pred EEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccC
Confidence 3444432 23567999999 66777778889999999996 777777776433 45789999 69998887765 5
Q ss_pred CcEEEEcCCCCceEEEEecCC-------------------------------------------------------CCEE
Q 022910 129 GLVQIWDPSSGNLKCTLEGPG-------------------------------------------------------GGVE 153 (290)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~-------------------------------------------------------~~i~ 153 (290)
++|.|+|..+.+++..+.... ....
T Consensus 266 ~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~ 345 (567)
T 1qks_A 266 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH 345 (567)
T ss_dssp TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccccc
Confidence 999999998887776553210 1123
Q ss_pred EEEEcCCCCEEEEee-CCCeEEEEECCcccEEEeeec-----CCCCeEEEEEcCCCCEE-EEEe-CCCeEEEEcCCC---
Q 022910 154 WVSWHPRGHIVLAGS-EDSTVWMWNADRAAYLNMFSG-----HGSSVTCGDFTPDGKTI-CTGS-DDATLRVWNPKS--- 222 (290)
Q Consensus 154 ~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l-~~~~-~dg~i~i~d~~~--- 222 (290)
.+.|+|++++|+++. .++.|.++|+.+++.+..+.. |.+.-..+ ++|++..+ +++. .++.|.++|..+
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGH 424 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCC
Confidence 567999999887765 578899999999987766653 22211122 57875444 4443 468999999987
Q ss_pred ----CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC-------CCcEEEEEcCCC-----c-EEEEEc--------cC
Q 022910 223 ----GENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-------DGSVHMVNITTG-----K-VVSSLV--------SH 277 (290)
Q Consensus 223 ----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------dg~i~~wd~~~~-----~-~~~~~~--------~~ 277 (290)
.+.++.+... ...-..+..+|++++|++... .++|.++|+.+. . .+..+. ..
T Consensus 425 ~~~~~kvv~~i~~~---g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~ 501 (567)
T 1qks_A 425 PDNAWKILDSFPAL---GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEG 501 (567)
T ss_dssp TTTBTSEEEEEECS---CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSS
T ss_pred ccccCEEEEEEecC---CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCC
Confidence 5666777652 233345778999999998763 359999999876 2 223332 12
Q ss_pred CCcEEEEEEecCC
Q 022910 278 TDSIECIGFSRSE 290 (290)
Q Consensus 278 ~~~v~~i~~s~d~ 290 (290)
...+..+.|+|+|
T Consensus 502 ~~~~~~~~~~~~G 514 (567)
T 1qks_A 502 QPRVVQGEFNKDG 514 (567)
T ss_dssp CCEEEEEEECTTS
T ss_pred CcceEeeeECCCC
Confidence 3578999999986
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=7.7e-13 Score=110.25 Aligned_cols=207 Identities=10% Similarity=-0.031 Sum_probs=137.3
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEec----------CCCcEEEEEccCCeeeeeeccc-------cCCEEEEEECCC
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQGH-------KDSVSSLAFSMD 118 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~-------~~~i~~~~~~~~ 118 (290)
.+..+.....+ .++++| +++.++++. .++.|.+||..+.+.+..+... ......+.|+|+
T Consensus 59 ~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 59 ILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred EEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC
Confidence 34445444444 999999 555555543 3678999999988877765422 123458999999
Q ss_pred CCEEEEEeC--CCcEEEEcCCCCceEEE-EecCCCCEEEEEEcCCC-CEEEEeeCC------------------------
Q 022910 119 GQLLASGGL--DGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRG-HIVLAGSED------------------------ 170 (290)
Q Consensus 119 ~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~~~~~-~~l~~~~~d------------------------ 170 (290)
|++|+++.. ++.|.++| .+++.+.. +..... +.+.|.+ +.+++.+.+
T Consensus 136 G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 136 NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC----YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce----EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 999998874 57899999 99988777 543221 1222221 122222233
Q ss_pred -----------------------CeEEEEECCccc--EEEeeec----------CCCCeEEEEEcCCCCEEEEEeC----
Q 022910 171 -----------------------STVWMWNADRAA--YLNMFSG----------HGSSVTCGDFTPDGKTICTGSD---- 211 (290)
Q Consensus 171 -----------------------g~i~i~d~~~~~--~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~---- 211 (290)
+.+.+.|+.... .+..+.. .......+.++|+++.++++..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 344444443221 1111110 0122334778998888887653
Q ss_pred ------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCCCcEEEEE
Q 022910 212 ------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITTGKVVSSL 274 (290)
Q Consensus 212 ------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~~wd~~~~~~~~~~ 274 (290)
.+.|.++|+.+++.+..+.. .....++.|+|+|+ +|+++. .++.|.+||+.+++.+.++
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i~~----g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEEEC----CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 35799999999999888863 44688999999999 787777 4899999999999999984
No 206
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=4.1e-14 Score=127.94 Aligned_cols=198 Identities=9% Similarity=0.011 Sum_probs=141.7
Q ss_pred EEEEEECCCCCcEEEEecCCCc----------------EEEEEccCCee----eeeeccccCCEEEEEECCCCCEEEEEe
Q 022910 67 VYSVACSPTDATLVATGGGDDK----------------GFFWRINQGDW----ASEIQGHKDSVSSLAFSMDGQLLASGG 126 (290)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~----------------i~iw~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 126 (290)
+..++|+| +++.|+.++.++. |++|++.+++. +.....+...+..+.|+|+|++|+.++
T Consensus 173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 56799999 6666666666554 99999987652 222333556688999999999988876
Q ss_pred C-----CCcEEEEcCCC------Cc-eEEEEecCCCCEEEEEEcCCCCEEEEeeCC----CeEEEEECCccc--EEEeee
Q 022910 127 L-----DGLVQIWDPSS------GN-LKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAA--YLNMFS 188 (290)
Q Consensus 127 ~-----dg~i~i~d~~~------~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~--~~~~~~ 188 (290)
. +..|++||+.+ +. ....+..+...+.. .|+|++..|+..+.. +.|.+|++.++. ....+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 5 56899999976 43 34555555555554 488888887776653 469999998764 123444
Q ss_pred cCCC--CeEEEEEcCCCCEEEEEeCCCe--EEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE-e---CCCcE
Q 022910 189 GHGS--SVTCGDFTPDGKTICTGSDDAT--LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG-S---KDGSV 260 (290)
Q Consensus 189 ~~~~--~i~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i 260 (290)
.+.. .+..++|++++.++++...++. |++|++.+++.+..+.. +...+..+.++|++..|+.. + ..+.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 4433 6888999987778888888884 66778877776666665 45678889999988766543 2 24789
Q ss_pred EEEEcCCCc
Q 022910 261 HMVNITTGK 269 (290)
Q Consensus 261 ~~wd~~~~~ 269 (290)
++||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999998876
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.64 E-value=7.5e-13 Score=110.31 Aligned_cols=206 Identities=13% Similarity=0.069 Sum_probs=138.8
Q ss_pred CCcEEEEecC--CC---cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe----------CCCcEEEEcCCCCc
Q 022910 76 DATLVATGGG--DD---KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGN 140 (290)
Q Consensus 76 ~~~~l~~~~~--dg---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~ 140 (290)
++..+++... .. .|.+||..+++.+..+.....+ .++++|++++++++. .++.|.+||..+.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 4455555442 22 8899999999988888754444 899999999988886 36789999999988
Q ss_pred eEEEEecC-------CCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEe-eecCCCCeEEEEEcCCC-CEEEEE
Q 022910 141 LKCTLEGP-------GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTG 209 (290)
Q Consensus 141 ~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~ 209 (290)
.+..+... ......+.|+|+|++|+++.. ++.|.++| .+++.+.. +.... . +.+.|.+ +.+++.
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~---~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-C---YHIHPGAPSTFYLL 183 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-e---EEEEeCCCceEEEE
Confidence 88776543 123457999999999999874 47899999 99988777 54221 1 2223322 233344
Q ss_pred eCCCeEEEEcCCCCeeeE--------------------------------------------------EEeCC-------
Q 022910 210 SDDATLRVWNPKSGENIH--------------------------------------------------VIRGH------- 232 (290)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~--------------------------------------------------~~~~~------- 232 (290)
+.||.+.+++. +++... .+...
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~ 262 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKAD 262 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccc
Confidence 44555544444 332221 11000
Q ss_pred CCcccCeEEEEEcCCCCEEEEEeC----------CCcEEEEEcCCCcEEEEEccCCCcEEEEEEecCC
Q 022910 233 PYHTEGLTCLTISADSTLALSGSK----------DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
.........+.++|+++.|+++.. .+.|.++|+.+++.+.++.. .....+++|+|||
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg 329 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDG 329 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCC
Confidence 000122334778998888877653 35799999999999999975 3468999999986
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=4.6e-14 Score=118.65 Aligned_cols=182 Identities=18% Similarity=0.194 Sum_probs=138.9
Q ss_pred CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe----------CCCcEEEEcCCCCceEEEEecC-------C
Q 022910 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGP-------G 149 (290)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-------~ 149 (290)
+.|.++|..+++.+..+.....+ .+.++|++++++++. .++.|.++|..+++.+..+... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999999988865556 899999999888876 3678999999999998887642 1
Q ss_pred CCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCC----------------------------CC------
Q 022910 150 GGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHG----------------------------SS------ 193 (290)
Q Consensus 150 ~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~----------------------------~~------ 193 (290)
.....+.|+|++++++++.. ++.|.++|+.+++.+.++.... ..
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 23567899999999999874 5789999998876554432100 00
Q ss_pred -------------------------------e---------------------------------EEEEEcCCCCEEEEE
Q 022910 194 -------------------------------V---------------------------------TCGDFTPDGKTICTG 209 (290)
Q Consensus 194 -------------------------------i---------------------------------~~~~~~~~~~~l~~~ 209 (290)
+ ..++++|+++.+++.
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 0 014556666665554
Q ss_pred eC----------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCCCcEEEEE
Q 022910 210 SD----------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITTGKVVSSL 274 (290)
Q Consensus 210 ~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~~wd~~~~~~~~~~ 274 (290)
.. .+.|.++|+.+.+.+..+.. ......+.|+|+++ +|++.. .++.|.++|+.+++.++++
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 32 34688888888888777763 34578899999999 888888 5899999999999999998
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=9.7e-14 Score=114.75 Aligned_cols=210 Identities=16% Similarity=0.173 Sum_probs=142.0
Q ss_pred EECCCCCcEEEEecC-----CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe----------CCCcEEEEc
Q 022910 71 ACSPTDATLVATGGG-----DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWD 135 (290)
Q Consensus 71 ~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d 135 (290)
...| ++..+++... ++.|.++|..+++.+..+.....+ . ++++|+++++++++ .++.|.+||
T Consensus 39 ~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 39 APAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 3456 4444444433 679999999999999988765555 4 99999999888775 367899999
Q ss_pred CCCCceEEEEecCC-------CCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeec-----------------
Q 022910 136 PSSGNLKCTLEGPG-------GGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSG----------------- 189 (290)
Q Consensus 136 ~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~----------------- 189 (290)
..+++.+..+.... .....+.|+|+|++++++.. ++.|.++|+.+++.+.++..
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH 195 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEE
Confidence 99999988876432 24567999999999888864 68899999998766544421
Q ss_pred ------------CCCCeEE----------------EEEc-CCCCEEEEEeCCCeEEEEcCCCC-----------------
Q 022910 190 ------------HGSSVTC----------------GDFT-PDGKTICTGSDDATLRVWNPKSG----------------- 223 (290)
Q Consensus 190 ------------~~~~i~~----------------~~~~-~~~~~l~~~~~dg~i~i~d~~~~----------------- 223 (290)
....+.. ..|. ++|++++ .+.+|.|+++|+.+.
T Consensus 196 ~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 196 CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccc
Confidence 0011100 1121 2333333 334566666666432
Q ss_pred -----------------------------------------------eeeEEEeCCCCcccCeEEEEEcCCCC-EEEEE-
Q 022910 224 -----------------------------------------------ENIHVIRGHPYHTEGLTCLTISADST-LALSG- 254 (290)
Q Consensus 224 -----------------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~- 254 (290)
+.+..+. ....+.+|.++|+++ +|+++
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~----vg~~~~~lavs~D~~~~ly~tn 350 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE----MGHEIDSINVSQDEKPLLYALS 350 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE----EEEEECEEEECSSSSCEEEEEE
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE----CCCCcceEEECCCCCeEEEEEc
Confidence 2222221 123456899999986 66665
Q ss_pred eCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 255 SKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 255 ~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
..++.|.++|..+++.++++... +.-..|.+++|
T Consensus 351 ~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 351 TGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 45899999999999999999863 44556677765
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.63 E-value=1.2e-16 Score=133.35 Aligned_cols=201 Identities=13% Similarity=0.080 Sum_probs=118.5
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCC-EE-
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VE- 153 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~- 153 (290)
.+..+++++.+|.|+.||..+++.+..+.. ..+.+..+..++..+++++.+|.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 345777888999999999999999888875 45555556667778888889999999999999876665432110 00
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCC
Q 022910 154 WVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP 233 (290)
Q Consensus 154 ~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 233 (290)
...+. .+..+++++.++.|+.||.++++.+..+..+. ...++|.+..+++++.++.|+.||.++++.+..+...
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~- 159 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF- 159 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE-
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc-
Confidence 00111 34578888889999999999999887776443 2345678888999999999999999999876665421
Q ss_pred CcccCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEE-EEEEecC
Q 022910 234 YHTEGLTCLTISADS---TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIE-CIGFSRS 289 (290)
Q Consensus 234 ~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~-~i~~s~d 289 (290)
. .....+.++. ..+++++.+|.|+.||..+|+.+.++... .++. ...++++
T Consensus 160 --~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~d 214 (369)
T 2hz6_A 160 --D--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQRE 214 (369)
T ss_dssp --E--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTS
T ss_pred --c--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCC
Confidence 1 1222333322 56777889999999999999999887743 4443 3444444
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=9.3e-13 Score=106.95 Aligned_cols=198 Identities=12% Similarity=0.172 Sum_probs=140.5
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee-ecc----ccCCEEEEEECCCCCEEEEEeCC---------
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQG----HKDSVSSLAFSMDGQLLASGGLD--------- 128 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d--------- 128 (290)
+...+.+++++++++.++++.. .+.|.+|+.. ++.... ... ....+.++++.++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 5577999999994266665554 3478899988 665433 221 12357899999999877776654
Q ss_pred ------CcEEEEcCCCCceEEEEecCCCCEEEEEEc----CCCCEEEEe-eCCCeEEEEECC-ccc-----EEEeeecCC
Q 022910 129 ------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWH----PRGHIVLAG-SEDSTVWMWNAD-RAA-----YLNMFSGHG 191 (290)
Q Consensus 129 ------g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~~ 191 (290)
+.|..|+.. ++..... .+......++|+ |+++.|+++ ..++.|.+|++. .++ ....+..+.
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC
Confidence 567888766 5544333 233457889999 999765555 567899999976 333 222333333
Q ss_pred -CCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC
Q 022910 192 -SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGSVHMVNITT 267 (290)
Q Consensus 192 -~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~ 267 (290)
..+..++++++|+++++...++.|.+||..+++....+.. +...+.+++|+|+++.|+ +...++.|..|++..
T Consensus 225 ~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC---PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC---SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC---CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 5678999999999888888889999999987777666654 446789999999999554 455568899999864
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.61 E-value=7e-14 Score=126.12 Aligned_cols=177 Identities=13% Similarity=0.102 Sum_probs=121.5
Q ss_pred ccCCEEEEEECCCCCEEEEE-----eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCe--------
Q 022910 106 HKDSVSSLAFSMDGQLLASG-----GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST-------- 172 (290)
Q Consensus 106 ~~~~i~~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~-------- 172 (290)
|...+..++|||+|++||.+ +.+..|++||+.+++.+............++|+|+|+.|+.++.+..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 44578999999999998843 34568999999998864111111111267999999999999988765
Q ss_pred -----EEEEECCccc----EEEeeecCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEcCCCCeeeEEEeCCCCcccCe
Q 022910 173 -----VWMWNADRAA----YLNMFSGHGSSVTCGDFTPDGKTICTGSDDA----TLRVWNPKSGENIHVIRGHPYHTEGL 239 (290)
Q Consensus 173 -----i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~v 239 (290)
|++|++.+++ .+.....+...+..+.|+|+|++|+.++.++ .|++|+..++.. ..+.. +...+
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~---~~~~~ 274 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVK---GVGAK 274 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEE---CSSCC
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeec---CCCce
Confidence 9999998775 3333344556788999999999998877666 788887765544 33333 33445
Q ss_pred EEEEEcCCCCEEEEEe---CCCcEEEEEcCCCcE--EEEEcc-C-CCcEEEEEEe
Q 022910 240 TCLTISADSTLALSGS---KDGSVHMVNITTGKV--VSSLVS-H-TDSIECIGFS 287 (290)
Q Consensus 240 ~~~~~~~~~~~l~~~~---~dg~i~~wd~~~~~~--~~~~~~-~-~~~v~~i~~s 287 (290)
....+ ++|.+++.+. .++.|++|++.+++. ...+.. + ...|..++|+
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 55566 5566444444 257899999987653 233333 3 4567778776
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=3.9e-13 Score=110.98 Aligned_cols=220 Identities=9% Similarity=0.045 Sum_probs=148.6
Q ss_pred cCEEEEEECCCCCcEEEEec--CCCcEEEEEccCCeeeeee-------ccccCCEEEEEECCCCCEEEEEeC-----CCc
Q 022910 65 DEVYSVACSPTDATLVATGG--GDDKGFFWRINQGDWASEI-------QGHKDSVSSLAFSMDGQLLASGGL-----DGL 130 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~-----dg~ 130 (290)
..+..++++| +++++++.. .++.++||.+.+++.. .+ ..+...+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6889999999 677777753 2343566666555433 22 134567999999999876665433 578
Q ss_pred EEEEcCCCCceEEEEecC------CCCEEEEEEcCCCCEE-EEee---CCCeEEEEECCcccEEEeeecC----------
Q 022910 131 VQIWDPSSGNLKCTLEGP------GGGVEWVSWHPRGHIV-LAGS---EDSTVWMWNADRAAYLNMFSGH---------- 190 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~---------- 190 (290)
|.+||+.+++.+..+..+ ...+..+++++++..+ ++.. .++.|.+||+.+++..+.+..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877766532 2346889999865444 4444 5789999999887766554321
Q ss_pred -------------------CCCeEEEEEcCCCCEEEEEeCCC-eEEEEcCC---CCe--------eeEEEeCCCCcccCe
Q 022910 191 -------------------GSSVTCGDFTPDGKTICTGSDDA-TLRVWNPK---SGE--------NIHVIRGHPYHTEGL 239 (290)
Q Consensus 191 -------------------~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~--------~~~~~~~~~~~~~~v 239 (290)
...+..|+|+|+++.|+++...+ .|..++.. .+. .+..+ + +....
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g---~~g~p 250 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-S---EKPIC 250 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-E---ECCSC
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-c---cCCCC
Confidence 12368899999999888877666 55555431 110 01111 1 22345
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc-CCCcEEEEEEecCC
Q 022910 240 TCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS-HTDSIECIGFSRSE 290 (290)
Q Consensus 240 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~i~~s~d~ 290 (290)
..++++++|.++++...++.|.+|+..+++....... +...+.+++|.++|
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 6789999999999998899999999856664333322 23568899998875
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.58 E-value=2e-13 Score=123.09 Aligned_cols=219 Identities=9% Similarity=0.028 Sum_probs=143.2
Q ss_pred cCCcCEEEEEECCCCCcEEE-Eec----CCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCC-------
Q 022910 62 GHSDEVYSVACSPTDATLVA-TGG----GDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG------- 129 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~-~~~----~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------- 129 (290)
+|...+..++|+| ++++|| +.+ ....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4566789999999 555555 332 23579999999988654311 11113567899 999999888774
Q ss_pred ------cEEEEcCCCCce--EEEEe--c-CCCCEEEEEEcCCCCEEEEeeC----CCeEEEEECCccc-EEEeeecCCCC
Q 022910 130 ------LVQIWDPSSGNL--KCTLE--G-PGGGVEWVSWHPRGHIVLAGSE----DSTVWMWNADRAA-YLNMFSGHGSS 193 (290)
Q Consensus 130 ------~i~i~d~~~~~~--~~~~~--~-~~~~i~~i~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~~~~~~~~~~~ 193 (290)
.|++|++.+... ...+. . +......+.|+|++++|+.... ...|+++++.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999987653 23333 2 3445788999999998865442 3589999998763 34455555555
Q ss_pred eEEEEEcCCCCEEEEEe-CC---CeEEEEcCCCCee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC---cEEEEE
Q 022910 194 VTCGDFTPDGKTICTGS-DD---ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG---SVHMVN 264 (290)
Q Consensus 194 i~~~~~~~~~~~l~~~~-~d---g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~wd 264 (290)
.... |++++..|+..+ .+ +.|..+++.++.. ...+.. +...+. .|+++++.|+....++ .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP---ERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC---CCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec---CCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 5554 666666665444 33 6899999987654 234443 333333 7888888777665543 689999
Q ss_pred cCCCcEEEEEcc-CCCcEEEEEEecCC
Q 022910 265 ITTGKVVSSLVS-HTDSIECIGFSRSE 290 (290)
Q Consensus 265 ~~~~~~~~~~~~-~~~~v~~i~~s~d~ 290 (290)
+.. .....+.. ..+.+..+.++|++
T Consensus 357 ~~g-~~~~~l~~p~~~~~~~~~~~~d~ 382 (693)
T 3iuj_A 357 YEG-KRVREVALPGLGSVSGFNGKHDD 382 (693)
T ss_dssp TTS-CEEEEECCSSSSEEEECCCCTTC
T ss_pred CCC-CeeEEeecCCCceEEeeecCCCC
Confidence 874 44555542 34567777776653
No 215
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.57 E-value=3.9e-11 Score=95.30 Aligned_cols=221 Identities=11% Similarity=0.033 Sum_probs=149.0
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~ 143 (290)
..+.+++|++.++.++++....+.|..+++........+.........+++.+++..|+.+ ...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 4678999999677788787778999999987655433333233567899999976655554 456789999987544333
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEeeC---CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE-EeCCCeEEEEc
Q 022910 144 TLEGPGGGVEWVSWHPRGHIVLAGSE---DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDATLRVWN 219 (290)
Q Consensus 144 ~~~~~~~~i~~i~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d 219 (290)
...........++++|++..|+.+.. .+.|..+++..................++++|++..|+. -...+.|.+++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 33323346789999997666555553 468988888643322222223346789999998766654 45568999999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC-CcEEEEEEecCC
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT-DSIECIGFSRSE 290 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~i~~s~d~ 290 (290)
+........+.. ......++.. .+.++++....+.|.+++..+++.+..+.... ....+|++.|++
T Consensus 196 ~~g~~~~~~~~~----~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 196 PAQPGRRKVLEG----LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TTEEEEEEEEEC----CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred cCCCceEEEecC----CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 976544333332 2234566664 34444444556899999999999999987543 257889998874
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=5.6e-12 Score=101.84 Aligned_cols=187 Identities=11% Similarity=0.031 Sum_probs=128.5
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc----ccCCEEEEEECCCCCEEEEEeCC---------C
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG----HKDSVSSLAFSMDGQLLASGGLD---------G 129 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d---------g 129 (290)
....+.+++++| ++.++++. ++.|.+|+..+++....... ....+..++++|+|+++++.... .
T Consensus 52 ~~~~~~~i~~~~-dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 52 MDAPVSSVALRQ-SGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp CSSCEEEEEEBT-TSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred CCCceEEEEECC-CCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 346789999999 55555543 46899999988765433221 12357899999999966654321 2
Q ss_pred cEEEEcCCC-CceEEEEecCCCCEEEEEEcCCCCEEEE-eeCCCeEEEEEC--CcccE-----EEeeecCCCCeEEEEEc
Q 022910 130 LVQIWDPSS-GNLKCTLEGPGGGVEWVSWHPRGHIVLA-GSEDSTVWMWNA--DRAAY-----LNMFSGHGSSVTCGDFT 200 (290)
Q Consensus 130 ~i~i~d~~~-~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~dg~i~i~d~--~~~~~-----~~~~~~~~~~i~~~~~~ 200 (290)
.-.||.+.. ++.. .+.........++|+|+++.|+. .+..+.|.+|++ .++.. +..+......+..+++.
T Consensus 129 ~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 129 QGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp CEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred CcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 234444432 3333 23333345788999999986654 555789999997 34432 22233334567899999
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEc-CCCCEEEEEeC
Q 022910 201 PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSK 256 (290)
Q Consensus 201 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 256 (290)
++|++.++....+.|.+||..+++.+..+.. ....+++++|. |+++.|++++.
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEEeCCCCCEEEEEcC
Confidence 9999888888888999999998988888775 44679999998 78776665544
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.54 E-value=6.3e-12 Score=104.86 Aligned_cols=216 Identities=13% Similarity=0.101 Sum_probs=151.9
Q ss_pred CCCCcEEEEecCCCcEEEEEccCC----eeeeeec-------cccCCEEEEEECCCCCEEEEEeCC------CcEEEEcC
Q 022910 74 PTDATLVATGGGDDKGFFWRINQG----DWASEIQ-------GHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDP 136 (290)
Q Consensus 74 ~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~ 136 (290)
++..++++++..++.|.++|+.+. +....+. .....-..+...|++ .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 656678888889999999999754 5555552 111245677889999 76666555 78999999
Q ss_pred CCCceEEEEecCCC---CEEEEEEcCCCCEEEEee-------------------CCCeEEEEECCcccEEEeeecC--CC
Q 022910 137 SSGNLKCTLEGPGG---GVEWVSWHPRGHIVLAGS-------------------EDSTVWMWNADRAAYLNMFSGH--GS 192 (290)
Q Consensus 137 ~~~~~~~~~~~~~~---~i~~i~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~--~~ 192 (290)
.+++.+.++..... --..+.|+|+++.++++. ...+|.+||+.+++.+.++... ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999988873322 234588899999999885 3689999999998888877653 13
Q ss_pred CeEEEEE--cCCCCEEEEEe------CCCeEEEEcCCCCee--eEEE--eCCCC-------------cccCeEEEEEcCC
Q 022910 193 SVTCGDF--TPDGKTICTGS------DDATLRVWNPKSGEN--IHVI--RGHPY-------------HTEGLTCLTISAD 247 (290)
Q Consensus 193 ~i~~~~~--~~~~~~l~~~~------~dg~i~i~d~~~~~~--~~~~--~~~~~-------------~~~~v~~~~~~~~ 247 (290)
....+.| +|+++++++++ .+++|.+|....+.. .+.+ ...+. .......+.++||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4455656 99999988777 566887766544321 1111 11000 0245788999999
Q ss_pred CCEEEEEeC-CCcEEEEEcC---CCcEEEEEccCC--------------CcEEEEEEecCC
Q 022910 248 STLALSGSK-DGSVHMVNIT---TGKVVSSLVSHT--------------DSIECIGFSRSE 290 (290)
Q Consensus 248 ~~~l~~~~~-dg~i~~wd~~---~~~~~~~~~~~~--------------~~v~~i~~s~d~ 290 (290)
|++|+++.. .+.|.+||+. +.+++..+.... +.-+.++++|||
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 999988876 6799999985 346666665421 135888999986
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.54 E-value=1.3e-12 Score=108.05 Aligned_cols=204 Identities=12% Similarity=0.012 Sum_probs=147.2
Q ss_pred cEEEEecCCC----cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe----------CCCcEEEEcCCCCceEE
Q 022910 78 TLVATGGGDD----KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 78 ~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~ 143 (290)
..+++...++ .|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3444544444 8889999999999998866666 799999999888886 36889999999999999
Q ss_pred EEecC-------CCCEEEEEEcCCCCEEEEeeC--CCeEEE--EECCcccEEE---------------------------
Q 022910 144 TLEGP-------GGGVEWVSWHPRGHIVLAGSE--DSTVWM--WNADRAAYLN--------------------------- 185 (290)
Q Consensus 144 ~~~~~-------~~~i~~i~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~--------------------------- 185 (290)
++..+ ......++++|+|++++++.. ...+.+ +|+.+...+.
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 88654 123567999999999998864 356777 7774300000
Q ss_pred eeec----------------------------------------------CC---------------------CCeEEEE
Q 022910 186 MFSG----------------------------------------------HG---------------------SSVTCGD 198 (290)
Q Consensus 186 ~~~~----------------------------------------------~~---------------------~~i~~~~ 198 (290)
.+.. .. .....++
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 0000 00 0001167
Q ss_pred EcCCCCEEEEEeC---------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCC
Q 022910 199 FTPDGKTICTGSD---------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITT 267 (290)
Q Consensus 199 ~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~~wd~~~ 267 (290)
++|+++.++++.. .+.+.++|+.+.+.+..+.. ......++|+|+|+ ++++.. .++.|.++|+.+
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 8889888886543 23566999999988877763 34688999999997 456666 589999999999
Q ss_pred CcEEEEEccCCCcEEEEEEec
Q 022910 268 GKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 268 ~~~~~~~~~~~~~v~~i~~s~ 288 (290)
++.+.++... ....++++.+
T Consensus 347 ~kvv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 347 DQDQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp CEEEEECCCC-SCCCEEECCC
T ss_pred CcEEEEEECC-CCCCEEEeec
Confidence 9999999864 4455666654
No 219
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=2.8e-12 Score=116.51 Aligned_cols=174 Identities=15% Similarity=0.153 Sum_probs=119.4
Q ss_pred CCEEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCe----------
Q 022910 108 DSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST---------- 172 (290)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~---------- 172 (290)
..+..++|+|+|++|+.++.+ ..|++||+.+++.+.... +...+..++|+|+ +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 468899999999998887653 469999999998764321 2112356899999 98888876543
Q ss_pred ----EEEEECCccc----EEEeeecCCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEcCCCC--eeeEEEeCCCCccc
Q 022910 173 ----VWMWNADRAA----YLNMFSGHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSG--ENIHVIRGHPYHTE 237 (290)
Q Consensus 173 ----i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~~~~ 237 (290)
|++|++.++. .+.....+...+..+.|+|+|++|+..+.++ .|++||+.++ +....+.. +..
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~ 317 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP---DLK 317 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---SSS
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---CCC
Confidence 8999997765 2222222334588999999999988776543 8999999877 31445543 233
Q ss_pred CeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCC--cEEEEEccCCCcEEEEEEe
Q 022910 238 GLTCLTISADSTLALSGSKD----GSVHMVNITTG--KVVSSLVSHTDSIECIGFS 287 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~--~~~~~~~~~~~~v~~i~~s 287 (290)
.+.... +|+|..|+..+.. +.|++|++.++ +....+..+...+.+++|+
T Consensus 318 ~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 318 AQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp SCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE
T ss_pred ceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE
Confidence 344443 4888888777653 45999999875 3333344455566677776
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=1.6e-11 Score=103.58 Aligned_cols=192 Identities=11% Similarity=0.092 Sum_probs=132.5
Q ss_pred EEECCCCCcEEEEecCCC--cEEEEEccCCeeeeee----ccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE
Q 022910 70 VACSPTDATLVATGGGDD--KGFFWRINQGDWASEI----QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
++|+| ++..|+++..++ .|.+|+...+.....+ ......+.+++++|++..|+++..++.|+.|+..++....
T Consensus 176 ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE
T ss_pred eeEec-CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE
Confidence 88888 555566665544 7888888765543333 2144567889999965666667778899999998776432
Q ss_pred E----EecCCCCE--EEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeecC---------------CCCeEEEEEcC
Q 022910 144 T----LEGPGGGV--EWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGH---------------GSSVTCGDFTP 201 (290)
Q Consensus 144 ~----~~~~~~~i--~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------------~~~i~~~~~~~ 201 (290)
. ........ ..++|+|+ +.++++-...+.|+.|+.... +..+.++ -.....++++|
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 2 12222222 38999995 556666667889999997654 2223222 13478999999
Q ss_pred CCCEEEEEe-CCCeEEEEcCCCCeeeEEEeCCC------------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 202 DGKTICTGS-DDATLRVWNPKSGENIHVIRGHP------------YHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 202 ~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
+|+++++-+ .++.|+.|++.++... .+.+.. ..-.....+++++++.++++-..+++|+.+.+
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999777777 8899999998777643 333220 01245889999999888888888889988875
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=2.5e-11 Score=98.36 Aligned_cols=196 Identities=13% Similarity=0.057 Sum_probs=133.2
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec---c-ccCCEEEEEECCCCCEEEE----EeC-
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ---G-HKDSVSSLAFSMDGQLLAS----GGL- 127 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~l~~----~~~- 127 (290)
...+..+...+.++++.+ +++++++...++.|.+|+.. ++...... + ....+..+++.++|+++++ |..
T Consensus 78 ~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 78 VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 455666777899999999 66777666666889999976 44322211 1 1234678999999998776 332
Q ss_pred ------------CCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCC------CeEEEEECCcccEE--Eee
Q 022910 128 ------------DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED------STVWMWNADRAAYL--NMF 187 (290)
Q Consensus 128 ------------dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~ 187 (290)
.+.|..|+..+++..... .......++|+|+++.|+++... +.|++|++...... ..+
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 256888888777655443 33457889999999988877665 78999998754311 111
Q ss_pred -ecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 188 -SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 188 -~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
......+..+++.++|++.+ +..+ .|.+|+. .++.+..+... ..+.+++|+|+++.|+.++.++ ++.++
T Consensus 234 ~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~~----~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPTP----GTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp ECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEECS----SCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEECC----CceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 11234456788999998544 4444 5999998 56666666642 2588899999998888887754 44444
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=1.6e-10 Score=94.54 Aligned_cols=183 Identities=12% Similarity=0.061 Sum_probs=124.9
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc----ccCCEEEEEECCCCCEEEEEeC------CCcEEE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG----HKDSVSSLAFSMDGQLLASGGL------DGLVQI 133 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~------dg~i~i 133 (290)
...+.+++|+| ++.++++. . ..|.+|+..+++....... ....+.+++++|+|+++++... .+.|..
T Consensus 89 ~~~v~~i~~~~-dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 89 PFMGSALAKIS-DSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SSCEEEEEEEE-TTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCcceEEEEeC-CCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 46799999999 66666654 3 4499999887765432221 1235889999999997665432 245666
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEe-eCCCeEEEEECC--cc-c-----EEEeeecCCCCeEEEEEcCCCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNAD--RA-A-----YLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~-----~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
++ +++.. .+.........++|+|+++.|+.+ +.++.|.+|++. ++ . .+..+......+..+++.++|+
T Consensus 166 ~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 166 VA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred Ee--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 66 45433 332233457889999999876555 457899999986 44 2 1222323345678899999998
Q ss_pred EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEc-CCCCEEEEEeC
Q 022910 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSK 256 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 256 (290)
++++....+.|.+|+. +++.+..+.. ....+++++|+ |++..|++++.
T Consensus 243 lwva~~~~~~v~~~d~-~g~~~~~i~~---~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DGNHIARYEV---PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEETTTEEEEECT-TCCEEEEEEC---SCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEEeCCCEEEEECC-CCCEEEEEEC---CCCCcEEEEEecCCCCEEEEEec
Confidence 8887777789999998 5666666654 34569999998 88776655544
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=2.6e-11 Score=108.92 Aligned_cols=188 Identities=14% Similarity=0.142 Sum_probs=134.9
Q ss_pred CCcEEEEEccCCeeeeeeccc-------------------------------cCCEEEEEECCCCCEEEEEeCCCc----
Q 022910 86 DDKGFFWRINQGDWASEIQGH-------------------------------KDSVSSLAFSMDGQLLASGGLDGL---- 130 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~-------------------------------~~~i~~~~~~~~~~~l~~~~~dg~---- 130 (290)
+|.|+.||..+++.+..+... ...-..+++.|+...++.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999988765410 001125778888889998887763
Q ss_pred ---------------EEEEcCCCCceEEEEecC--C-------CCEEEEEEcCCCC---EEEEeeCCCeEEEEECCcccE
Q 022910 131 ---------------VQIWDPSSGNLKCTLEGP--G-------GGVEWVSWHPRGH---IVLAGSEDSTVWMWNADRAAY 183 (290)
Q Consensus 131 ---------------i~i~d~~~~~~~~~~~~~--~-------~~i~~i~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 183 (290)
|..+|..+++.+-.++.. . .++.......+|+ .++.++.+|.++++|.++++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999999999998877642 1 1222222223554 788999999999999999988
Q ss_pred EEeeecCCC---------------------------------------CeEEEEEcCCCCEEEEEeC-------------
Q 022910 184 LNMFSGHGS---------------------------------------SVTCGDFTPDGKTICTGSD------------- 211 (290)
Q Consensus 184 ~~~~~~~~~---------------------------------------~i~~~~~~~~~~~l~~~~~------------- 211 (290)
+........ .-..++|+|+..++++...
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 743321110 0112678888888877532
Q ss_pred --------------------------------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCc
Q 022910 212 --------------------------------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (290)
Q Consensus 212 --------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (290)
+|.|+.||+.+++.+..+... ..+..-.+...+.++++|+.||.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~gt~dg~ 497 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV----TIFNGGTLSTAGNLVFEGSADGR 497 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC----CCccCccceECCCEEEEECCCCc
Confidence 378999999999988877642 22223345556789999999999
Q ss_pred EEEEEcCCCcEEEEEccC
Q 022910 260 VHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 260 i~~wd~~~~~~~~~~~~~ 277 (290)
|+.||.++|+.+.++...
T Consensus 498 l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 498 VIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEETTTCCEEEEEECS
T ss_pred EEEEECCCCccceeeeCC
Confidence 999999999999998754
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=3.5e-11 Score=99.20 Aligned_cols=199 Identities=11% Similarity=0.036 Sum_probs=136.4
Q ss_pred cCCcCEEEEEECCCCCcEEEEecC-----CCcEEEEEccCCeeeeeecc------ccCCEEEEEECCCCCEE-EEEe---
Q 022910 62 GHSDEVYSVACSPTDATLVATGGG-----DDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDGQLL-ASGG--- 126 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l-~~~~--- 126 (290)
+|-..+.++++.+ ++.++++... .+.|.+||+.+++.+..+.. +...+..+++++++..+ ++..
T Consensus 64 ~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 5667899999999 5666665533 57899999999887665542 22356889999865554 4444
Q ss_pred CCCcEEEEcCCCCceEEEEecC-----------------------------CCCEEEEEEcCCCCEEEEeeCCC-eEEEE
Q 022910 127 LDGLVQIWDPSSGNLKCTLEGP-----------------------------GGGVEWVSWHPRGHIVLAGSEDS-TVWMW 176 (290)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~~~~-----------------------------~~~i~~i~~~~~~~~l~~~~~dg-~i~i~ 176 (290)
.++.|.+||+.+++....+..| ...+..|+|+|+++.|+++...+ .|+.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 5789999999888766554321 02368899999999888887665 55555
Q ss_pred ECCc---c-----cEEE--eeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC
Q 022910 177 NADR---A-----AYLN--MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 177 d~~~---~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (290)
+... + +... ...++......++++++|+++++....+.|.+||..+++....... . ....+++++|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~-~~~~p~~va~~~ 300 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-E-KLSWTDSFNFGS 300 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-G-GGSCEEEEEECT
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-C-ceecCCeeEECC
Confidence 5321 1 0000 1112334566789999999999998899999999866664333322 1 345689999999
Q ss_pred CCCEEEEEeCCCcEEEE
Q 022910 247 DSTLALSGSKDGSVHMV 263 (290)
Q Consensus 247 ~~~~l~~~~~dg~i~~w 263 (290)
++.++++.+..+.+.+|
T Consensus 301 ~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 301 DGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp TSCEEEEECCGGGSGGG
T ss_pred CCcEEEEeCcccccccc
Confidence 99888887765554333
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.42 E-value=3.4e-11 Score=107.92 Aligned_cols=188 Identities=12% Similarity=0.180 Sum_probs=138.2
Q ss_pred CCcEEEEEccCCeeeeeeccccC--------------------------------CEEEEEECCCCCEEEEEeCCC----
Q 022910 86 DDKGFFWRINQGDWASEIQGHKD--------------------------------SVSSLAFSMDGQLLASGGLDG---- 129 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~--------------------------------~i~~~~~~~~~~~l~~~~~dg---- 129 (290)
+|.|+.||..+++.+..+..... ....++++|++..++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 68999999999998876643211 112567888888888887654
Q ss_pred ---------------cEEEEcCCCCceEEEEecCC---------CCEEEEEEcCCC---CEEEEeeCCCeEEEEECCccc
Q 022910 130 ---------------LVQIWDPSSGNLKCTLEGPG---------GGVEWVSWHPRG---HIVLAGSEDSTVWMWNADRAA 182 (290)
Q Consensus 130 ---------------~i~i~d~~~~~~~~~~~~~~---------~~i~~i~~~~~~---~~l~~~~~dg~i~i~d~~~~~ 182 (290)
.|..+|..+++.+..++... .....+....+| ..++.++.+|.|+++|.++++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 59999999999987776421 122223333467 689999999999999999999
Q ss_pred EEEeeecCC-----------CCe------------------------EEEEEcCCCCEEEEEeC----------------
Q 022910 183 YLNMFSGHG-----------SSV------------------------TCGDFTPDGKTICTGSD---------------- 211 (290)
Q Consensus 183 ~~~~~~~~~-----------~~i------------------------~~~~~~~~~~~l~~~~~---------------- 211 (290)
.+..+.... .++ ..++++|+..++++...
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 876654221 111 14688998888877543
Q ss_pred ---------------------------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 022910 212 ---------------------------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (290)
Q Consensus 212 ---------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 264 (290)
.|.|..||+.+++.+..+.. ...+....+...+.++++++.+|.+++||
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH----VSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC----CCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 27899999999998887763 33334444556778888999999999999
Q ss_pred cCCCcEEEEEccC
Q 022910 265 ITTGKVVSSLVSH 277 (290)
Q Consensus 265 ~~~~~~~~~~~~~ 277 (290)
+.+++++.++...
T Consensus 505 ~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 505 AATGEKLWEAPTG 517 (677)
T ss_dssp TTTCCEEEEEECS
T ss_pred CCCCceeeeeeCC
Confidence 9999999999754
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.42 E-value=5e-11 Score=93.63 Aligned_cols=195 Identities=9% Similarity=0.035 Sum_probs=139.0
Q ss_pred EEEEEECCCCCcEEEEecC--CCcEEEEEccCCeeeeeeccccC-CEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceE
Q 022910 67 VYSVACSPTDATLVATGGG--DDKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 142 (290)
...++|+| ++.++++.+. ++.|+++|+.+++.+..+..... ....+++. ++.|+.+ -.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 58999998 4666665543 57999999999998887652221 22345554 4455444 45789999999999999
Q ss_pred EEEecC-CCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC-----CCeEEEEEcCCCCEEEEEeCCCeEE
Q 022910 143 CTLEGP-GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGSDDATLR 216 (290)
Q Consensus 143 ~~~~~~-~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~ 216 (290)
.++... .. ...++++++.++++..++.|.++|..+.+.+..+.... ..+..+.|. ++..++....++.|.
T Consensus 100 ~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 100 KNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 888643 22 23355577777777778999999999988887776321 236778888 665555555688999
Q ss_pred EEcCCCCeeeEEEeCCCC----------cccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC
Q 022910 217 VWNPKSGENIHVIRGHPY----------HTEGLTCLTISADST-LALSGSKDGSVHMVNITTG 268 (290)
Q Consensus 217 i~d~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~ 268 (290)
+.|..+++.+..+..... .....+.++|+|+++ +++++...+.|++.++...
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999999888874210 113568999999876 5555666788988887653
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.36 E-value=4.4e-10 Score=87.29 Aligned_cols=191 Identities=11% Similarity=0.102 Sum_probs=133.1
Q ss_pred eeeccCCcC--EEEEEECCCCCcEEEEecCCC--cEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEE
Q 022910 58 HIFSGHSDE--VYSVACSPTDATLVATGGGDD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQ 132 (290)
Q Consensus 58 ~~~~~h~~~--v~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~ 132 (290)
..+ .|... ...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........+.++.|+.. -.++.+.
T Consensus 35 ~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 35 HSY-PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEE-ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEe-cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEE
Confidence 344 44444 3788898 346666766665 89999999999888876433 23232222245555554 4588999
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecC--C---CCeEEEEEcCCCCEEE
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--G---SSVTCGDFTPDGKTIC 207 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~ 207 (290)
+||..+.+.+.++...... ..+ ++++..|+.+...+.|.++|..+.+.+.++... . ..+..+.|. +|..++
T Consensus 111 v~D~~t~~~~~ti~~~~eG-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEG-WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEETTTCCEEEEEECSSCC-CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECccCcEEEEEECCCCc-eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 9999999999998854322 233 356777777777889999999999888776642 2 334557776 676555
Q ss_pred EEeCCCeEEEEcCCCCeeeEEEeCCCC---------cccCeEEEEEcCCCCEEEEEeC
Q 022910 208 TGSDDATLRVWNPKSGENIHVIRGHPY---------HTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
..-.+..|.+.|.++++.+..+..... .....+.++|+|+++.|++.+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 555788999999999999888875321 1245799999998776666654
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.36 E-value=5.3e-10 Score=87.80 Aligned_cols=187 Identities=12% Similarity=0.123 Sum_probs=131.3
Q ss_pred eeeeeeccccC--CEEEEEECCCCCEEEEEeC--CCcEEEEcCCCCceEEEEecCCC-CEEEEEEcCCCCEEE-EeeCCC
Q 022910 98 DWASEIQGHKD--SVSSLAFSMDGQLLASGGL--DGLVQIWDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVL-AGSEDS 171 (290)
Q Consensus 98 ~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~-~~~~dg 171 (290)
+.+.++. |.. ....+.|++++.++++.+. ++.|+++|+.+++.+..+..... ....+++. +..|+ +.-.++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 3455554 443 3689999998654444443 58999999999999988764332 23345554 44444 445678
Q ss_pred eEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC--cccCeEEEEEcCCCC
Q 022910 172 TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY--HTEGLTCLTISADST 249 (290)
Q Consensus 172 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~ 249 (290)
.+.++|..+.+.+.++...... ...++++++.++++..++.|.++|..+.+.+..+..... .-..++.+.|. ++.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 9999999999988888643111 233555777777777889999999999988877764211 11246788888 676
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEEccC-------------CCcEEEEEEecCC
Q 022910 250 LALSGSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSE 290 (290)
Q Consensus 250 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~i~~s~d~ 290 (290)
.++....++.|.+.|..+++.+..+... .....+|+|+|++
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 6655556789999999999999998642 1356899999875
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.35 E-value=2.3e-11 Score=104.92 Aligned_cols=199 Identities=12% Similarity=0.073 Sum_probs=146.2
Q ss_pred CCCcEEEEecCCCcEEEEEccCCeeeeeecc-ccCCEEEEEE-C-CCCCEEEEEe------------------CCCcEEE
Q 022910 75 TDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAF-S-MDGQLLASGG------------------LDGLVQI 133 (290)
Q Consensus 75 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~-~-~~~~~l~~~~------------------~dg~i~i 133 (290)
++..++++...++.|.+.|+.+.+....+.- .......+++ . |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 3455666667778899999999998774432 2345788888 5 9999998884 2468999
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCC--------------------------------------eEEE
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS--------------------------------------TVWM 175 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg--------------------------------------~i~i 175 (290)
.|..+.+...++.... ....++++|+|+++++++.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999999888877543 456788999999999888553 3667
Q ss_pred EECCc--ccE-EEeeecCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEcCCCCe------------eeEEEeCCCCcccCe
Q 022910 176 WNADR--AAY-LNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGE------------NIHVIRGHPYHTEGL 239 (290)
Q Consensus 176 ~d~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~~~~v 239 (290)
.|.++ ++. +..+.. .....++.++|+|+++++++ .+.+|.++|+.+.+ ....+. .....
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~----vG~gP 333 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE----LGLGP 333 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----CCSCE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----CCCCc
Confidence 77776 333 334432 33557889999999887665 57899999998653 122222 45678
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCC----------CcEEEEEccCCC
Q 022910 240 TCLTISADSTLALSGSKDGSVHMVNITT----------GKVVSSLVSHTD 279 (290)
Q Consensus 240 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~----------~~~~~~~~~~~~ 279 (290)
..++|+|+|..+++.-.+++|.+|++.+ .+.+.++..|..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 8999999995555666799999999977 678888887654
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.34 E-value=5.5e-10 Score=86.76 Aligned_cols=185 Identities=15% Similarity=0.180 Sum_probs=129.8
Q ss_pred eeeeeccccCC--EEEEEECCCCCEEEEEeCCC--cEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEee-CCCeE
Q 022910 99 WASEIQGHKDS--VSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTV 173 (290)
Q Consensus 99 ~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~dg~i 173 (290)
.+.++. |... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+..... .......+.+..|+... .++.+
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEeeCCEE
Confidence 445554 5433 4788898 666666666665 899999999999988875443 33322223344555444 58899
Q ss_pred EEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCC-C-cccCeEEEEEcCCCCEE
Q 022910 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP-Y-HTEGLTCLTISADSTLA 251 (290)
Q Consensus 174 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l 251 (290)
.+||..+.+.+.++...... ..++ +++..|+.+..++.|.++|..+.+.+..+.... . .-..++.+.|. +|+++
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG-~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG-WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC-CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECccCcEEEEEECCCCc-eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 99999999999988754322 3343 567777777778899999999999888776421 0 11345567776 67666
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEEccC------------CCcEEEEEEecCC
Q 022910 252 LSGSKDGSVHMVNITTGKVVSSLVSH------------TDSIECIGFSRSE 290 (290)
Q Consensus 252 ~~~~~dg~i~~wd~~~~~~~~~~~~~------------~~~v~~i~~s~d~ 290 (290)
+..-.++.|.+.|..+++.+..+... ....++|+|+|++
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 65556889999999999999988642 1356899999874
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=4.4e-10 Score=96.98 Aligned_cols=207 Identities=14% Similarity=0.067 Sum_probs=149.8
Q ss_pred cEEEEecCCCcEEEEEccCCeeeeeecc---------------------------------c------cCCEEEEEECC-
Q 022910 78 TLVATGGGDDKGFFWRINQGDWASEIQG---------------------------------H------KDSVSSLAFSM- 117 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~---------------------------------~------~~~i~~~~~~~- 117 (290)
+.|.+|+..|.++|+-+.+++.+..+.. + .+.......|.
T Consensus 16 ~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t 95 (595)
T 1fwx_A 16 YGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFT 95 (595)
T ss_dssp EEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEE
T ss_pred EEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCC
Confidence 3577899999999999988876665410 0 11122344443
Q ss_pred ----CCCEEEEEeC-CCcEEEEcCCCCceEEEEecC-CCCEEEEEE-c-CCCCEEEEee------------------CCC
Q 022910 118 ----DGQLLASGGL-DGLVQIWDPSSGNLKCTLEGP-GGGVEWVSW-H-PRGHIVLAGS------------------EDS 171 (290)
Q Consensus 118 ----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~~~i~~i~~-~-~~~~~l~~~~------------------~dg 171 (290)
+|+++++... ++.|.+.|+.+.+....+... ...+..+++ + |++.++++++ .++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 7777777654 567999999999988866543 345888888 5 8999998885 245
Q ss_pred eEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------
Q 022910 172 TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA-------------------------------------- 213 (290)
Q Consensus 172 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------------------------------------- 213 (290)
.+.++|..+.+...++.... ....++++|+|+++++.+.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 79999999998888877433 467788999999999888553
Q ss_pred eEEEEcCCC--Cee-eEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCc------------EEEEEccC
Q 022910 214 TLRVWNPKS--GEN-IHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGK------------VVSSLVSH 277 (290)
Q Consensus 214 ~i~i~d~~~--~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~------------~~~~~~~~ 277 (290)
.|.|.|.++ ++. +..+. ......++.++|||+++++++ .+.+|.++|+.+.+ .+..+..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ip----vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v- 329 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIP----IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL- 329 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEE----EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-
T ss_pred cEEEEeCcccCCceeEEEEe----cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-
Confidence 367777776 444 34444 234567789999999887776 47899999998653 4555543
Q ss_pred CCcEEEEEEecCC
Q 022910 278 TDSIECIGFSRSE 290 (290)
Q Consensus 278 ~~~v~~i~~s~d~ 290 (290)
....+.++|+|+|
T Consensus 330 G~gP~h~aF~~dG 342 (595)
T 1fwx_A 330 GLGPLHTAFDGRG 342 (595)
T ss_dssp CSCEEEEEECTTS
T ss_pred CCCcceEEECCCC
Confidence 4578999999987
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.31 E-value=9.5e-10 Score=85.45 Aligned_cols=180 Identities=11% Similarity=0.051 Sum_probs=129.0
Q ss_pred EEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEE--EEEECCCCCEEEEEeCCCcEEEEcCCCCceEEE
Q 022910 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVS--SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (290)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (290)
...|.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -. .... .+++.. ++.+++.-.++.+.+||..+.+.+.+
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4688887 4677888888899999999999988776 22 2332 355532 33444445689999999999999999
Q ss_pred EecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecC--C---CCeEEEEEcCCCCEEEEEeCCCeEEEEc
Q 022910 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--G---SSVTCGDFTPDGKTICTGSDDATLRVWN 219 (290)
Q Consensus 145 ~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~~~~~dg~i~i~d 219 (290)
+..... -..++ +++..|+.+..++.|.++|..+.+.+.++... . ..+..+.|. +|..++.......|.+.|
T Consensus 132 i~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 885433 23444 46778888777899999999999888777642 2 244667777 666555555688999999
Q ss_pred CCCCeeeEEEeCCC----------CcccCeEEEEEcCCCCEEEEEe
Q 022910 220 PKSGENIHVIRGHP----------YHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 220 ~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
.++++.+..+.... ......+.|+++|+++.|++.+
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999988876431 1224679999999765554444
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.31 E-value=1.2e-09 Score=91.33 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=129.8
Q ss_pred CEEEEEECCCCCcEEEEecCC------CcEEEEEccCCeeeeeeccccC---CEEEEEECCCCCEEEEEe----------
Q 022910 66 EVYSVACSPTDATLVATGGGD------DKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGG---------- 126 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~---------- 126 (290)
.-..+...| ++ +++++..+ |.|.++|..+.+.+.++..... --..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 139 RLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred cccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccc
Confidence 345667888 55 66665444 7899999999998888863322 234578899999888874
Q ss_pred ---------CCCcEEEEcCCCCceEEEEecC-C-CCEEEEEE--cCCCCEEEEee------CCCeEEEEECCcccE--EE
Q 022910 127 ---------LDGLVQIWDPSSGNLKCTLEGP-G-GGVEWVSW--HPRGHIVLAGS------EDSTVWMWNADRAAY--LN 185 (290)
Q Consensus 127 ---------~dg~i~i~d~~~~~~~~~~~~~-~-~~i~~i~~--~~~~~~l~~~~------~dg~i~i~d~~~~~~--~~ 185 (290)
...+|.+||+.+++.+.++... . .....+.| +|+++++++++ .+++|.+|....++. .+
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 3689999999999888887753 1 23455656 99999888877 456787766544321 11
Q ss_pred ee--ec----------------CCCCeEEEEEcCCCCEEEEEeC-CCeEEEEcCCC---CeeeEEEeCCC----------
Q 022910 186 MF--SG----------------HGSSVTCGDFTPDGKTICTGSD-DATLRVWNPKS---GENIHVIRGHP---------- 233 (290)
Q Consensus 186 ~~--~~----------------~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~---~~~~~~~~~~~---------- 233 (290)
.+ .. ....+..|.++|++++|+++.. .+.|.+||+.. .+.+..+....
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G 376 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAG 376 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTS
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccc
Confidence 11 00 0245788999999999987765 68999999853 34444444310
Q ss_pred -CcccCeEEEEEcCCCCEEEEEe
Q 022910 234 -YHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 234 -~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
........+.++|+|++|+++.
T Consensus 377 ~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 377 HKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccCCCCCCEEEEcCCCCEEEEEc
Confidence 0011357899999999999998
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=3.8e-10 Score=92.08 Aligned_cols=197 Identities=18% Similarity=0.145 Sum_probs=137.2
Q ss_pred EEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEc
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWH 158 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 158 (290)
.+..++.++.|..++.. ++.......+...+.++...+++. ++.++.++.|..++.. ++....+......+.++...
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEc
Confidence 45567778999999988 776666655555566677776666 6667778999999998 88777776655667777787
Q ss_pred CCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccC
Q 022910 159 PRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEG 238 (290)
Q Consensus 159 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (290)
+++.+++.. +.|..|| .+++.+..+......+.++...+++. |.+++.++.|..++. +++.+..+.. ....
T Consensus 186 ~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~---~~~~ 256 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT---GKRI 256 (330)
T ss_dssp TTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC---SSCC
T ss_pred CCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC---CCCc
Confidence 777755544 7899999 67776666665556678888888775 556667888999985 5555555553 2222
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEecC
Q 022910 239 LTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 239 v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~d 289 (290)
+..+.+.+++ .|.+++.+|.|..+|. +++.+..+......+.++...++
T Consensus 257 ~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~ 305 (330)
T 3hxj_A 257 ESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDEN 305 (330)
T ss_dssp CSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTT
T ss_pred cccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCC
Confidence 3345555555 5667888889999995 78877777654455555555443
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.29 E-value=3.9e-09 Score=81.29 Aligned_cols=192 Identities=9% Similarity=0.073 Sum_probs=131.9
Q ss_pred eeeeccCCc--CEEEEEECCCCCcEEEEecCC--CcEEEEEccCCeeeeeeccccCC-EEEEEECCCCCEEEEEeCCCcE
Q 022910 57 THIFSGHSD--EVYSVACSPTDATLVATGGGD--DKGFFWRINQGDWASEIQGHKDS-VSSLAFSMDGQLLASGGLDGLV 131 (290)
Q Consensus 57 ~~~~~~h~~--~v~~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i 131 (290)
+..+ .|.. -...|.|++ +.++.+.+.. ..|+.+|+.+++.+..+...... --.+++. .++.++..-.++.+
T Consensus 12 ~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEE
T ss_pred EEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEE
Confidence 3444 4543 356899986 4566666665 48999999999988877633321 1233443 23344444568999
Q ss_pred EEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCC-----CCeEEEEEcCCCCEE
Q 022910 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTI 206 (290)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l 206 (290)
.+||..+.+.+.++...... ..++ +++..|+.+..++.|.++|..+.+.+.++.... ..+..+.|. +|+.+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 99999999999998864432 3444 467777777778999999999998887776421 345667765 56655
Q ss_pred EEEeCCCeEEEEcCCCCeeeEEEeCCCC----------cccCeEEEEEcCCCCEEEEEeC
Q 022910 207 CTGSDDATLRVWNPKSGENIHVIRGHPY----------HTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
+....+..|.+.|.++++.+..+..... .....+.++++|+++.|++.+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5555688999999999999888764311 2246799999997665555554
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=2.7e-10 Score=95.80 Aligned_cols=112 Identities=13% Similarity=0.007 Sum_probs=89.1
Q ss_pred CCCCEEEEEeCC-----CcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEee----------CCCeEEEEECCcc
Q 022910 117 MDGQLLASGGLD-----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNADRA 181 (290)
Q Consensus 117 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~----------~dg~i~i~d~~~~ 181 (290)
++++++++.... +.|.++|+.+++.+.++.....+ .++++|++++++++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466766666542 69999999999999999876665 899999999888876 3678999999999
Q ss_pred cEEEeeecC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEcCCCCeeeEEEe
Q 022910 182 AYLNMFSGH-------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIR 230 (290)
Q Consensus 182 ~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~ 230 (290)
+.+..+... ......+.|+|+|++|+++.. ++.|.++|+.+++.+..+.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 988877532 234567899999999998874 5789999999887765543
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.25 E-value=3.1e-09 Score=82.59 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=130.8
Q ss_pred eeeeeeccccC--CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCC-EEEEEEcCCCCEEEEeeCCCeEE
Q 022910 98 DWASEIQGHKD--SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLAGSEDSTVW 174 (290)
Q Consensus 98 ~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~~~dg~i~ 174 (290)
+.+..+. |.. -...+.|+ ++.++++.+.+|.|+++|+.+++.+..+ ..... -..+++.. ++++++.-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3444553 443 34788887 4566777788889999999999998887 33321 23355542 34444455689999
Q ss_pred EEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC--cccCeEEEEEcCCCCEEE
Q 022910 175 MWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY--HTEGLTCLTISADSTLAL 252 (290)
Q Consensus 175 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~ 252 (290)
+||..+.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+.+..+..... .-..++.+.|. +|.+++
T Consensus 120 V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence 999999999998875433 23444 4678888887899999999999998887764221 11245677777 676665
Q ss_pred EEeCCCcEEEEEcCCCcEEEEEccC-------------CCcEEEEEEecCC
Q 022910 253 SGSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSE 290 (290)
Q Consensus 253 ~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~i~~s~d~ 290 (290)
..-....|.+.|..+++.+..+... ....++|||+|++
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence 5556889999999999999888632 1367899999864
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.2e-09 Score=98.59 Aligned_cols=195 Identities=10% Similarity=0.071 Sum_probs=127.8
Q ss_pred EEEEECCCCCcEEEEecCC-------------CcEEEEEccCCe----eeeeecc-ccCCEEEEEECCCCCEEEEEeC--
Q 022910 68 YSVACSPTDATLVATGGGD-------------DKGFFWRINQGD----WASEIQG-HKDSVSSLAFSMDGQLLASGGL-- 127 (290)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~d-------------g~i~iw~~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-- 127 (290)
..++|+ ++..++++ +.+ ..|++|++.++. .+..... |...+..+.|+|++++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYS-SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEE-ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEE-EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 467888 56555544 444 349999987754 2333333 4556788999999998765432
Q ss_pred --CCcEEEEcCCCCc-eEEEEecCCCCEEEEEEcCCCCEEEEeeC----CCeEEEEECCcccE--EEeeecCCCCeEEEE
Q 022910 128 --DGLVQIWDPSSGN-LKCTLEGPGGGVEWVSWHPRGHIVLAGSE----DSTVWMWNADRAAY--LNMFSGHGSSVTCGD 198 (290)
Q Consensus 128 --dg~i~i~d~~~~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~~----dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~ 198 (290)
...|+++++.++. ....+..+....... |++++..|+..+. .+.|..+++.++.. .+.+..+...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 3589999998763 344555555555554 5666665554443 36799999987653 244555555554 8
Q ss_pred EcCCCCEEEEEeC-CC--eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCcE
Q 022910 199 FTPDGKTICTGSD-DA--TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD----GSVHMVNITTGKV 270 (290)
Q Consensus 199 ~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~ 270 (290)
|+++++.|+.... ++ .|++|++..+. ...+... ....+..+.+++++..|+....+ +.|+.||+.+++.
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 8898888876655 43 68999987543 3444321 33457777888888766655444 7899999987753
No 239
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.24 E-value=3.8e-08 Score=81.13 Aligned_cols=219 Identities=11% Similarity=-0.010 Sum_probs=142.4
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEE-EEEeCCCcEEEEcCCCCceE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~ 142 (290)
...+..++|.+..+.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 34578999998677777777778899999988765444333223345788898755544 44455688999998765544
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEee-CC-CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEc
Q 022910 143 CTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWN 219 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d 219 (290)
..+.........++++|.+..|+.+. .. +.|..+++............-.....|+++|++..|+.+ ...+.|..++
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 44444445688999999666555544 34 789999887544333333334467899999866666544 4567899999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
+........+.. .......+++. .+.++++-...+.|..++..+|+.+..+........+|++
T Consensus 232 ~dG~~~~~~~~~---~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 232 LDGSHRKAVISQ---GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp TTSCSCEEEECS---SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCCceEEEEeC---CCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 875443333332 23456677773 4556666667788999997777766666543333444443
No 240
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.23 E-value=2.2e-07 Score=78.08 Aligned_cols=222 Identities=9% Similarity=0.017 Sum_probs=145.6
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC----eeeeeeccccCCEEEEEECCCCC-EEEEEeCCCcEEEEcCC
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDPS 137 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~ 137 (290)
....+.+|+|.+.++.++++-...+.|+.+++... .....+.........+++.+.+. ++++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34567899999867777777777888988888652 22233332345678899987544 44454567899999988
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCe
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDAT 214 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~ 214 (290)
.......+.........|++.|.+.+|+.+.. .+.|...++............-.....|+++|.+..|+.+ ...+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 66655555545556899999997666665553 4789999987654333333334577999999877766655 45678
Q ss_pred EEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
|..+|+........+.... .......+++. .+.++++-...+.|..++..+|+.+..+........+|..
T Consensus 270 I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEK-RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEETTSCCCEEEEECSS-TTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEeCCCCccEEEEeCCC-CCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 9999987544433333211 22345567763 3456666667789999998888877777654444555543
No 241
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.23 E-value=4.1e-08 Score=82.13 Aligned_cols=219 Identities=11% Similarity=-0.010 Sum_probs=143.8
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEE-EEEeCCCcEEEEcCCCCceE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~ 142 (290)
...+..++|.+.++.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 34577899998677788787778899999988765444333223345678888765554 44455678999988765544
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEeeC-C-CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE-EeCCCeEEEEc
Q 022910 143 CTLEGPGGGVEWVSWHPRGHIVLAGSE-D-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDATLRVWN 219 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d 219 (290)
..+.........++++|.+..|+.+.. . +.|..+++............-.....|+|+|++..|+. -+..+.|..++
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 444444456899999987666655543 3 68999988755433333333445789999986666654 45577899999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
+........+.. .......+++. .+.++++-...+.|..++..+++.+..+........+|++
T Consensus 275 ~dG~~~~~~~~~---~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 275 LDGSHRKAVISQ---GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTSCSCEEEECS---SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCCeeEEEEEC---CCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 875443333332 23456777773 4566666667889999997777776666543344444444
No 242
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=7.6e-10 Score=91.58 Aligned_cols=150 Identities=14% Similarity=0.049 Sum_probs=113.7
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEee----------CCCeEEEEE
Q 022910 113 LAFSMDGQLLASGGL-----DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWN 177 (290)
Q Consensus 113 ~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~----------~dg~i~i~d 177 (290)
....|+++.+++... ++.|.++|..+++.+..+.....+ . ++++|++++++++. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345689998888765 679999999999999998866665 4 99999999888776 357899999
Q ss_pred CCcccEEEeeecCC-------CCeEEEEEcCCCCEEEEEeC--CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCC
Q 022910 178 ADRAAYLNMFSGHG-------SSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS 248 (290)
Q Consensus 178 ~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (290)
..+.+.+..+.... .....+.|+|+|++++++.. ++.|.++|+.+++.+..+... . . ...+....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~----g-~-~~~~P~g~ 189 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP----D-C-YHIFPTAP 189 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----S-E-EEEEEEET
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC----C-c-ceeecCCC
Confidence 99999888775322 24567899999999998864 689999999999998888642 1 1 12222234
Q ss_pred CEEEEEeCCCcEEEEEcCC-CcE
Q 022910 249 TLALSGSKDGSVHMVNITT-GKV 270 (290)
Q Consensus 249 ~~l~~~~~dg~i~~wd~~~-~~~ 270 (290)
+.+++.+.||.+.+.++.+ ++.
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCC
T ss_pred ceeEEECCCCCEEEEECCCCCeE
Confidence 5566677777777777765 554
No 243
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.21 E-value=4.5e-08 Score=76.38 Aligned_cols=205 Identities=13% Similarity=0.123 Sum_probs=138.0
Q ss_pred eeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc-ccCCEEEEEECCCCCEEEEEeCCCcEEEEcC
Q 022910 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (290)
+.+.+-.+.+..++|+|+++.++++...++.|...|.. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 34556667899999999767788778889999999988 777776642 2256788999988877676656788999987
Q ss_pred CCCce---EEEEe------cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCc---ccEEEeee-------cCCCCeEEE
Q 022910 137 SSGNL---KCTLE------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---AAYLNMFS-------GHGSSVTCG 197 (290)
Q Consensus 137 ~~~~~---~~~~~------~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~~~~~i~~~ 197 (290)
..... +.... ........++|+|.++.|+++.......+|.+.. ...+..+. .....+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65542 22221 1233468999999988777777655555554431 11112111 123457899
Q ss_pred EEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCc------ccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 198 DFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYH------TEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 198 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
+++|. +.+++.+.....|.++|.. ++.+..+.-.... -...-.|+|.++|+++++ +.-+.++++.-
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 99994 4556667778889999976 5555555433211 236789999999985554 66677777654
No 244
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.20 E-value=2.2e-07 Score=75.48 Aligned_cols=211 Identities=9% Similarity=0.010 Sum_probs=135.7
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccC----CeeeeeeccccCCEEEEEECCCCCEE-EEEeCCCcEEEEcCCC
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSS 138 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~ 138 (290)
-..+.+++|.+.++.++++-...+.|..+++.. ......+...-.....+++.+.+..| ++-...+.|.++++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 446789999986777887877789999999876 22222232222345788998755544 4445678999999875
Q ss_pred CceEEEEecCCCCEEEEEEcCCCCEEEEeeC-C-CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeE
Q 022910 139 GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-D-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATL 215 (290)
Q Consensus 139 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 215 (290)
......+.........++++|.+..|+.+.. . +.|..+++............-.....|+++|++..|+.+ +..+.|
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 5444344434456889999997666555544 2 689988886543322222234567899999877666554 456799
Q ss_pred EEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
..+|+..... ..+............+++. .+.++++-...+.|..++..+++.+..+..
T Consensus 189 ~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 189 SSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 9999874333 3332211122345677775 456666666778999999878876666653
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.20 E-value=4.8e-10 Score=91.50 Aligned_cols=197 Identities=18% Similarity=0.153 Sum_probs=129.8
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceE
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (290)
+...+.++...+ ++.++ .++.+ |..++. +++....+...........+. +..+++++.++.|..++.. ++..
T Consensus 58 ~~~~~~~~~~~~-~g~l~-v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~ 129 (330)
T 3hxj_A 58 GEIIECRPSIGK-DGTIY-FGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEK 129 (330)
T ss_dssp GGEEEECCEETT-TTEEC-CSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEE
T ss_pred CCCcccceEEec-CCcEE-EecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEE
Confidence 344556777766 55444 45544 888885 555554444332222233333 5567888888999999988 7777
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCC
Q 022910 143 CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 222 (290)
..+......+.++...+++. +++++.++.|..||.. ++.+..+......+.++.+.+++.++ +++ +.|..|| .+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~ 203 (330)
T 3hxj_A 130 WRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PD 203 (330)
T ss_dssp EEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TT
T ss_pred EEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CC
Confidence 66665555566677776666 5667778999999998 77776666555667777777777644 444 7899999 67
Q ss_pred CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC
Q 022910 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT 278 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 278 (290)
++....+.. ....+.++...++|. |.+++.++.|..++ .+++.+..+....
T Consensus 204 g~~~~~~~~---~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~~~ 254 (330)
T 3hxj_A 204 GTEKWNFYA---GYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKTGK 254 (330)
T ss_dssp SCEEEEECC---SSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEECSS
T ss_pred CcEEEEEcc---CCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeCCC
Confidence 776665553 335577788888775 44566778888887 4677766665433
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.18 E-value=3.1e-08 Score=76.27 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=128.7
Q ss_pred eeeeecccc--CCEEEEEECCCCCEEEEEeCC--CcEEEEcCCCCceEEEEecCCCC-EEEEEEcCCCCEEEEeeCCCeE
Q 022910 99 WASEIQGHK--DSVSSLAFSMDGQLLASGGLD--GLVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLAGSEDSTV 173 (290)
Q Consensus 99 ~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~~~dg~i 173 (290)
.+..+. |. .-...+.|++ +.++.+.+.. ..|+++|+.+++.+..+...... --.+++. .++++...-.++.+
T Consensus 11 v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 11 VVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEE
T ss_pred EEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEE
Confidence 344453 54 3466899976 5555555554 48999999999999888754432 1234443 23444445568999
Q ss_pred EEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC--cccCeEEEEEcCCCCEE
Q 022910 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY--HTEGLTCLTISADSTLA 251 (290)
Q Consensus 174 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 251 (290)
.+||..+.+.+.++...... ..++ +++..|+++..++.|.++|..+.+.+..+..... .-..++.+.|. +|+++
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 99999999999988854433 4454 4677777777789999999999988877764210 11345667765 67666
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEEccC-------------CCcEEEEEEecCC
Q 022910 252 LSGSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSE 290 (290)
Q Consensus 252 ~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~i~~s~d~ 290 (290)
+..-.+..|.+.|..+++.+..+... ....++|+|+|++
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 55556789999999999999988622 1356899999863
No 247
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=1.5e-12 Score=108.41 Aligned_cols=148 Identities=17% Similarity=0.177 Sum_probs=86.2
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCC-CeE-
Q 022910 118 DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS-SVT- 195 (290)
Q Consensus 118 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~- 195 (290)
++..+++++.+|.|+.||..+++.+..+.. +.+.+..+..++..+++++.+|.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999888876 4455555556777888888999999999988876655543211 010
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 196 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
+..+. .+..+++++.++.|+.||..+++.+..+... . ...++|++..|++++.++.|+.||..+|+.+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~---~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA---F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC---C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 00111 3456788888999999999999987776542 1 23456788899999999999999999998765543
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.17 E-value=5.6e-08 Score=79.17 Aligned_cols=220 Identities=9% Similarity=0.011 Sum_probs=139.0
Q ss_pred eccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec-------------------cccCCEEEEEECCCCC
Q 022910 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-------------------GHKDSVSSLAFSMDGQ 120 (290)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~ 120 (290)
+.+.-....+++|.+ ++.+++++..++.|..|+..+++...... .....+..+++.++..
T Consensus 14 ~~g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp EECSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred cCCccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 444334567889998 56766678888999999887654332110 0123578999997333
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEEec----CCCCEEEEEEcC-CCCEEEEeeC-----------------CCeEEEEEC
Q 022910 121 LLASGGLDGLVQIWDPSSGNLKCTLEG----PGGGVEWVSWHP-RGHIVLAGSE-----------------DSTVWMWNA 178 (290)
Q Consensus 121 ~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~i~~~~-~~~~l~~~~~-----------------dg~i~i~d~ 178 (290)
.|+++...+.|..++..++........ .......+++.+ +|+++++-.. .+.|..|+.
T Consensus 93 ~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 93 QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 455554455588888776543221111 123478899999 8987666432 367999998
Q ss_pred CcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEcCCCCe--eeEEEeCCCCcccCeEEEEEcCCCCEEEEEe
Q 022910 179 DRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
.+++....... ......|+++|++++|+++ +..+.|.+|++.... ....+.. ... ...+++.++|+++++..
T Consensus 173 ~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 173 STKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp TTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEec
Confidence 76654332221 2345679999999876655 556899999987421 1122221 122 78899999998777664
Q ss_pred C----------CCcEEEEEcCCCcEEEEEccCC----CcEEEEEE
Q 022910 256 K----------DGSVHMVNITTGKVVSSLVSHT----DSIECIGF 286 (290)
Q Consensus 256 ~----------dg~i~~wd~~~~~~~~~~~~~~----~~v~~i~~ 286 (290)
. .+.|..++. .++.+..+.... ..++++++
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp EETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE
T ss_pred CcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE
Confidence 4 467888886 578777776432 34555555
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.16 E-value=1.5e-08 Score=84.42 Aligned_cols=192 Identities=11% Similarity=0.080 Sum_probs=124.4
Q ss_pred cEEEEecCCCcEEEEEccCCeeeeeeccc---------cCCEE-EEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEec
Q 022910 78 TLVATGGGDDKGFFWRINQGDWASEIQGH---------KDSVS-SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---------~~~i~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (290)
..+++++.++.|..+|..+++.+...... ...+. .+.. .+..+++++.++.|..+|..+++.+..+..
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 35556777899999999999887665532 22232 2222 456788888899999999999998877665
Q ss_pred CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCe-----EEEEEcCCCCEEEEEeCCCeEEEEcCCC
Q 022910 148 PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV-----TCGDFTPDGKTICTGSDDATLRVWNPKS 222 (290)
Q Consensus 148 ~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 222 (290)
.......... .+..+++++.++.|..+|.++++.+..+....... ..... .+..+++++.++.|..+|..+
T Consensus 132 ~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 132 AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTT
T ss_pred CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCC
Confidence 4322111222 24578888889999999999998877665432111 11122 245788888899999999999
Q ss_pred CeeeEEEeCCCCccc----CeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 223 GENIHVIRGHPYHTE----GLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~----~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
++.+........... .+..+...| .+..+++++.++.|..+|..+++.+....
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 988776653210000 000011111 24566777778888888888888776654
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.16 E-value=1.7e-07 Score=75.84 Aligned_cols=216 Identities=13% Similarity=0.057 Sum_probs=136.9
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC--CcEEEEcCCCCceE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD--GLVQIWDPSSGNLK 142 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~ 142 (290)
.....++|.+ ++.++++....+.|..|+.... ....+. .......+++.++++++++.... ..|..++..+++..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 5678999999 6677777777899999987653 333332 23468899999999966555432 24777777777754
Q ss_pred EEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE-EEee-------e--cCCCCeEEEEEcCCCCEEEEE-e
Q 022910 143 CTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY-LNMF-------S--GHGSSVTCGDFTPDGKTICTG-S 210 (290)
Q Consensus 143 ~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~-------~--~~~~~i~~~~~~~~~~~l~~~-~ 210 (290)
..... .......++..+.+..+++-...+.|+++|..+++. +... . ..-.....| +|++++|+++ .
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 33332 122345555555555555554688999999875421 1110 0 111234555 7778766554 5
Q ss_pred CCCeEEEEcCCC-Cee--eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE--EEccCCCcEEEEE
Q 022910 211 DDATLRVWNPKS-GEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS--SLVSHTDSIECIG 285 (290)
Q Consensus 211 ~dg~i~i~d~~~-~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~i~ 285 (290)
..+.|.+|++.. +.. ...+.. ......++++++|+++++....+.|.+++.. ++... .+.......++++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 578999999864 321 122221 1235668999999887777778899999975 66533 3444345789999
Q ss_pred Ee---cCC
Q 022910 286 FS---RSE 290 (290)
Q Consensus 286 ~s---~d~ 290 (290)
|. |++
T Consensus 262 ~~g~~~d~ 269 (306)
T 2p4o_A 262 FGQTEGDC 269 (306)
T ss_dssp ECCSTTTT
T ss_pred EecccCCC
Confidence 98 663
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=1.7e-08 Score=90.50 Aligned_cols=188 Identities=13% Similarity=0.193 Sum_probs=131.4
Q ss_pred CCcEEEEEccCCeeeeeecccc-------------------------------CCEEEEEECCCCCEEEEEeCCC-----
Q 022910 86 DDKGFFWRINQGDWASEIQGHK-------------------------------DSVSSLAFSMDGQLLASGGLDG----- 129 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~-------------------------------~~i~~~~~~~~~~~l~~~~~dg----- 129 (290)
+|.|+.+|..+++.+..+.... .....+++.|....++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999887664210 0112467888888888887765
Q ss_pred --------------cEEEEcCCCCceEEEEecC--C-------CCEEEEEEcCCCC---EEEEeeCCCeEEEEECCcccE
Q 022910 130 --------------LVQIWDPSSGNLKCTLEGP--G-------GGVEWVSWHPRGH---IVLAGSEDSTVWMWNADRAAY 183 (290)
Q Consensus 130 --------------~i~i~d~~~~~~~~~~~~~--~-------~~i~~i~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 183 (290)
.|..+|..+++.+-.++.. . .+.....+..+++ .++.++.+|.++++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 4999999999998877642 1 2333333333565 689999999999999999988
Q ss_pred EEeeecCC------------CCe------------------------EEEEEcCCCCEEEEEe-----------------
Q 022910 184 LNMFSGHG------------SSV------------------------TCGDFTPDGKTICTGS----------------- 210 (290)
Q Consensus 184 ~~~~~~~~------------~~i------------------------~~~~~~~~~~~l~~~~----------------- 210 (290)
+....... .++ ..++++|+..++++..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 74432111 000 1257788766665421
Q ss_pred -------------------CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 022910 211 -------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVV 271 (290)
Q Consensus 211 -------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 271 (290)
.+|.|..||+.+++.+..+... .......+...+.++++++.+|.|++||.++++.+
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP----THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC----CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 2378999999999988777632 22222233446778999999999999999999999
Q ss_pred EEEccC
Q 022910 272 SSLVSH 277 (290)
Q Consensus 272 ~~~~~~ 277 (290)
.++...
T Consensus 493 ~~~~~~ 498 (668)
T 1kv9_A 493 WQFEAQ 498 (668)
T ss_dssp EEEECS
T ss_pred eEecCC
Confidence 988754
No 252
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.15 E-value=1.6e-09 Score=89.62 Aligned_cols=186 Identities=11% Similarity=0.003 Sum_probs=126.0
Q ss_pred CCceeeeccCCcCEEEEEECCCCCcEEEEec---------CCCcEEEEEccCCeeeeeeccc-------cCCEEEEEECC
Q 022910 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGG---------GDDKGFFWRINQGDWASEIQGH-------KDSVSSLAFSM 117 (290)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~-------~~~i~~~~~~~ 117 (290)
.+.+..+.....+ .++++|+++.++++.+ .++.|.+||+.+++.+.++..+ ......++|+|
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA 133 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence 4455556555556 7999995555544431 3688999999999999887633 12346799999
Q ss_pred CCCEEEEEeC--CCcEEE--EcCCCCceE---------------------------EEEec-------------------
Q 022910 118 DGQLLASGGL--DGLVQI--WDPSSGNLK---------------------------CTLEG------------------- 147 (290)
Q Consensus 118 ~~~~l~~~~~--dg~i~i--~d~~~~~~~---------------------------~~~~~------------------- 147 (290)
+|++++++.. ...|.+ +|+.+-+.+ ..+..
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg 213 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS 213 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC
T ss_pred CCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCC
Confidence 9999998864 456888 887430000 00000
Q ss_pred ---------------------------CC---------------------CCEEEEEEcCCCCEEEEeeC-C--------
Q 022910 148 ---------------------------PG---------------------GGVEWVSWHPRGHIVLAGSE-D-------- 170 (290)
Q Consensus 148 ---------------------------~~---------------------~~i~~i~~~~~~~~l~~~~~-d-------- 170 (290)
.. .....++++|+++.++++.. .
T Consensus 214 ~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 214 SQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp SCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred CCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 00 00011668888888887643 2
Q ss_pred CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCC-EEEEEe-CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcC
Q 022910 171 STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTGS-DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 171 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (290)
+.+.++|+.+.+.+.++.... ....|+|+|+++ .+++.. .++.|.++|+.+++.+..+.. ......+++.+
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v----g~~P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL----DKGPESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC----CSCCCEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC----CCCCCEEEeec
Confidence 356699999999988887443 688999999997 556666 599999999999999888874 33444555543
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.12 E-value=4e-08 Score=81.75 Aligned_cols=188 Identities=15% Similarity=0.072 Sum_probs=123.8
Q ss_pred EEEEecCCCcEEEEEccCCeeeeeeccccCCE-----EEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCC--
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDSV-----SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-- 151 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-- 151 (290)
.++.++.++.|..+|..+++.+.......... ..... .+..+++++.++.|..+|..+++.+.........
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 222 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGS 222 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC----
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCC
Confidence 44556667777777777777666554321110 11111 2456778888999999999999987766532110
Q ss_pred -----EEEEEEcC--CCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCe
Q 022910 152 -----VEWVSWHP--RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (290)
Q Consensus 152 -----i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 224 (290)
+..+...| .+..+++++.++.+..+|.++++.+..... .....+.. .+..+++++.++.|..+|..+++
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp -------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred cccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 00011111 256778888899999999999987766542 23444444 36678888899999999999999
Q ss_pred eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 225 NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
........ ....+..... .+..|++++.+|.|+++|..+++.+..+..
T Consensus 299 ~~w~~~~~--~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 299 TLWTQSDL--LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EEEEECTT--TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEeeccc--CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 87766522 1112222222 256788899999999999999999888765
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=3.3e-07 Score=72.46 Aligned_cols=183 Identities=10% Similarity=-0.044 Sum_probs=117.3
Q ss_pred CcEEEEEccCCeee-----eeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCC
Q 022910 87 DKGFFWRINQGDWA-----SEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPR 160 (290)
Q Consensus 87 g~i~iw~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~ 160 (290)
+.|+.+++...... ..+......+..++|++++..|+.+ ...+.|..+++........+.........++++++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 57888888754321 1122223457899999976655555 45789999999876554444333356889999997
Q ss_pred CCEEEE-eeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEcCCCCeeeEEEeCCCCcc
Q 022910 161 GHIVLA-GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD---DATLRVWNPKSGENIHVIRGHPYHT 236 (290)
Q Consensus 161 ~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~ 236 (290)
+..|+. -...+.|.++++..................++++|++..|+.+.. .+.|..+++... ....+... ..
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~--~~ 166 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQD--NL 166 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECT--TC
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEEC--CC
Confidence 655554 455688999998754322222222256789999997666655543 468888887543 33333221 23
Q ss_pred cCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEE
Q 022910 237 EGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVVS 272 (290)
Q Consensus 237 ~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~ 272 (290)
.....++++|++..|+.+ ...+.|.++++.......
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 467899999976655544 456799999987544333
No 255
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=1.3e-08 Score=91.40 Aligned_cols=193 Identities=14% Similarity=0.132 Sum_probs=134.7
Q ss_pred EEEEecCCCcEEEEEccCCeeeeeeccccC-----------CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEec
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEIQGHKD-----------SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (290)
.|++++.++.|..+|..+++.+.++..... ....+.+ .+..|++++.++.|..+|..+++.+..+..
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 455566688999999999998887653321 0112333 466888889999999999999999888775
Q ss_pred C-C----CCEEE-EEEcCCCCEEEEeeC------CCeEEEEECCcccEEEeeecCCCC----------------------
Q 022910 148 P-G----GGVEW-VSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSS---------------------- 193 (290)
Q Consensus 148 ~-~----~~i~~-i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~---------------------- 193 (290)
. . ..+.. ... .+..+++++. +|.|+.||.++++.+-++......
T Consensus 157 ~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 4 1 11111 111 2345565553 689999999999988766532211
Q ss_pred ----------eEEEEEcCCCCEEEEEeCCC-------------------eEEEEcCCCCeeeEEEeCCCCc------ccC
Q 022910 194 ----------VTCGDFTPDGKTICTGSDDA-------------------TLRVWNPKSGENIHVIRGHPYH------TEG 238 (290)
Q Consensus 194 ----------i~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~~~~------~~~ 238 (290)
...++++|++.++++++.++ .|..+|..+++.+..++..... ...
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 13577889888999887664 5999999999998887753210 122
Q ss_pred eEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 239 LTCLTISADS---TLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 239 v~~~~~~~~~---~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
...+....+| ..|++++.+|.|+++|..+|+++..+.
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 2233333467 689999999999999999999998775
No 256
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.08 E-value=7e-09 Score=93.20 Aligned_cols=195 Identities=16% Similarity=0.191 Sum_probs=131.0
Q ss_pred EEEEecCCCcEEEEEccCCeeeeeeccccCC----------E-EEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEec
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDS----------V-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~----------i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (290)
.+++++.++.|+.+|..+++.+.++...... + ..+.. .+..+++++.++.|+.+|..+|+.+-.+..
T Consensus 72 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp EEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 4556667889999999999988877532210 0 11222 356788889999999999999999877764
Q ss_pred C-C-CCEEEEEEcC--CCCEEEEee------CCCeEEEEECCcccEEEeeecCC--------------------------
Q 022910 148 P-G-GGVEWVSWHP--RGHIVLAGS------EDSTVWMWNADRAAYLNMFSGHG-------------------------- 191 (290)
Q Consensus 148 ~-~-~~i~~i~~~~--~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~-------------------------- 191 (290)
. . .....+..+| .+..+++++ .+|.|+.||.++++.+-++....
T Consensus 150 ~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~ 229 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE 229 (689)
T ss_dssp CSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred cCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence 2 1 1111111122 133455544 36899999999999876654210
Q ss_pred -----CCeEEEEEcCCCCEEEEEeCCCe-------------------EEEEcCCCCeeeEEEeCCCC------cccCeEE
Q 022910 192 -----SSVTCGDFTPDGKTICTGSDDAT-------------------LRVWNPKSGENIHVIRGHPY------HTEGLTC 241 (290)
Q Consensus 192 -----~~i~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~~~~------~~~~v~~ 241 (290)
.....++++|...++++++.++. |..+|..+++.+..++.... ....+..
T Consensus 230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l 309 (689)
T 1yiq_A 230 QGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMIL 309 (689)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred cCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEE
Confidence 01125788898889999888764 99999999999888765321 1112222
Q ss_pred EEEcCCCC---EEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 242 LTISADST---LALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 242 ~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
.....+|+ .|+.++.+|.++++|..+|+++....
T Consensus 310 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 310 AELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 22223564 78899999999999999999986554
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.05 E-value=6.5e-08 Score=85.03 Aligned_cols=187 Identities=12% Similarity=0.104 Sum_probs=127.0
Q ss_pred CCcEEEEEccCCeeeeeeccccCC-------------------------------------E-EEEEECCCCCEEEEEeC
Q 022910 86 DDKGFFWRINQGDWASEIQGHKDS-------------------------------------V-SSLAFSMDGQLLASGGL 127 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~~~~~l~~~~~ 127 (290)
++.|..+|..+++.+.++...... + ..+++.+....++.++.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 789999999999888765421110 0 12456666666766653
Q ss_pred C----------------CcEEEEcCCCCceEEEEecCC----------CCEEEEEEcCCCC---EEEEeeCCCeEEEEEC
Q 022910 128 D----------------GLVQIWDPSSGNLKCTLEGPG----------GGVEWVSWHPRGH---IVLAGSEDSTVWMWNA 178 (290)
Q Consensus 128 d----------------g~i~i~d~~~~~~~~~~~~~~----------~~i~~i~~~~~~~---~l~~~~~dg~i~i~d~ 178 (290)
+ +.|..+|..+++.+-.++... .++. +...++|+ .++.++.+|.++++|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 359999999999887776321 2221 22234663 6778899999999999
Q ss_pred CcccEEEeeecCC-------------CCe--------------------------EEEEEcCCCCEEEEEe---------
Q 022910 179 DRAAYLNMFSGHG-------------SSV--------------------------TCGDFTPDGKTICTGS--------- 210 (290)
Q Consensus 179 ~~~~~~~~~~~~~-------------~~i--------------------------~~~~~~~~~~~l~~~~--------- 210 (290)
.+++.+..+.... .++ ..++++|+..+|++.+
T Consensus 334 ~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 413 (571)
T 2ad6_A 334 ENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP 413 (571)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccc
Confidence 9998876654221 111 2357888777777653
Q ss_pred ----------------------------CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 022910 211 ----------------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 211 ----------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
.+|.|..||+.+++.+..+... ..+....+...+.++++++.||.|+.
T Consensus 414 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~v~~g~~dg~l~a 489 (571)
T 2ad6_A 414 FMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK----FAAWGGTLYTKGGLVWYATLDGYLKA 489 (571)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTSEEEE
T ss_pred cccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC----CCccceeEEECCCEEEEEcCCCeEEE
Confidence 3578999999999988777532 22222222224567788999999999
Q ss_pred EEcCCCcEEEEEccC
Q 022910 263 VNITTGKVVSSLVSH 277 (290)
Q Consensus 263 wd~~~~~~~~~~~~~ 277 (290)
||.++++++.++...
T Consensus 490 ~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 490 LDNKDGKELWNFKMP 504 (571)
T ss_dssp EETTTCCEEEEEECS
T ss_pred EECCCCCEEEEEeCC
Confidence 999999999988743
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.05 E-value=6.2e-08 Score=85.29 Aligned_cols=144 Identities=17% Similarity=0.212 Sum_probs=97.8
Q ss_pred CcEEEEcCCCCceEEEEec--CC--------CCEEEEEEc-CCCC---EEEEeeCCCeEEEEECCcccEEEeeecCC---
Q 022910 129 GLVQIWDPSSGNLKCTLEG--PG--------GGVEWVSWH-PRGH---IVLAGSEDSTVWMWNADRAAYLNMFSGHG--- 191 (290)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~--~~--------~~i~~i~~~-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--- 191 (290)
+.|..+|..+++.+-.++. |. .++. +... .+|+ .++.++.+|.++++|.++++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999887753 21 1222 2222 4563 78889999999999999998876554321
Q ss_pred ----------CCe--------------------------------EEEEEcCCCCEEEEEe-------------------
Q 022910 192 ----------SSV--------------------------------TCGDFTPDGKTICTGS------------------- 210 (290)
Q Consensus 192 ----------~~i--------------------------------~~~~~~~~~~~l~~~~------------------- 210 (290)
.++ ..++++|...++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 1345666555555432
Q ss_pred --------------CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 211 --------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 211 --------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
.+|.|..||+.+++.+....... .+..-.+...+.+++.|+.||.|+.||.++|+.+.+++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 25789999999999877765321 111111112466788899999999999999999999875
Q ss_pred C
Q 022910 277 H 277 (290)
Q Consensus 277 ~ 277 (290)
.
T Consensus 526 ~ 526 (582)
T 1flg_A 526 G 526 (582)
T ss_dssp S
T ss_pred C
Confidence 4
No 259
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.04 E-value=5.3e-07 Score=73.24 Aligned_cols=208 Identities=10% Similarity=-0.016 Sum_probs=136.2
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeee-eeeccccCCEEEEEECCCCCE-EEEEeCCCcEEEEcCCCCceE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA-SEIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~ 142 (290)
..+.+++|.+.++.++.+-...+.|..+++...... ..+...-.....+++.+.+.. +++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 356789999867778888778889999998765321 122222234567888875554 444456788999998765444
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEc
Q 022910 143 CTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWN 219 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d 219 (290)
..+.........+++.|.+..|+.+.. .+.|..+++............-.....|+++|++..|+.+ +..+.|..++
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 444344556889999987666666553 5789999887543222222233467899999966666544 5578899999
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
+........+.. .......+++.. +.++++-...+.|..++..+++.+..+..
T Consensus 195 ~dG~~~~~~~~~---~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 195 LDGTNRQAVVKG---SLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTSCSCEEEECS---CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCceEEEecC---CCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 864433223322 234456777753 45556666678999999888876666554
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.02 E-value=9.6e-08 Score=84.10 Aligned_cols=188 Identities=12% Similarity=0.106 Sum_probs=126.1
Q ss_pred CCCcEEEEEccCCeeeeeeccccCC-------------------------------------E-EEEEECCCCCEEEEEe
Q 022910 85 GDDKGFFWRINQGDWASEIQGHKDS-------------------------------------V-SSLAFSMDGQLLASGG 126 (290)
Q Consensus 85 ~dg~i~iw~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~~~~~l~~~~ 126 (290)
.+|.|+.+|..+++.+.++...... + ..+++.+....++.++
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999988765422110 0 1345566777777776
Q ss_pred CC----------------CcEEEEcCCCCceEEEEecCCC----------CEEEEEEc-CCC---CEEEEeeCCCeEEEE
Q 022910 127 LD----------------GLVQIWDPSSGNLKCTLEGPGG----------GVEWVSWH-PRG---HIVLAGSEDSTVWMW 176 (290)
Q Consensus 127 ~d----------------g~i~i~d~~~~~~~~~~~~~~~----------~i~~i~~~-~~~---~~l~~~~~dg~i~i~ 176 (290)
.+ +.|..+|..+++.+-.++.... ++. +... .+| ..++.++.+|.++++
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEE
Confidence 54 3799999999999877764321 122 2222 466 567788999999999
Q ss_pred ECCcccEEEeeecCC-------------CCe--------------------------EEEEEcCCCCEEEEEe-------
Q 022910 177 NADRAAYLNMFSGHG-------------SSV--------------------------TCGDFTPDGKTICTGS------- 210 (290)
Q Consensus 177 d~~~~~~~~~~~~~~-------------~~i--------------------------~~~~~~~~~~~l~~~~------- 210 (290)
|.++++.+....... .++ ..++++|+..++++..
T Consensus 339 D~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~ 418 (599)
T 1w6s_A 339 DRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDW 418 (599)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceee
Confidence 999998876544211 111 2356777666655431
Q ss_pred --------------------------------CCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC
Q 022910 211 --------------------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (290)
Q Consensus 211 --------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (290)
..|.|..||+.+++.+...... .+...-.+...+.+++.++.||
T Consensus 419 ~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagg~vf~gt~dg 494 (599)
T 1w6s_A 419 EPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER----FAVWGGTMATAGDLVFYGTLDG 494 (599)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTS
T ss_pred ecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC----CCccCcceEecCCEEEEECCCC
Confidence 3478999999999987776521 1111111122466788899999
Q ss_pred cEEEEEcCCCcEEEEEccC
Q 022910 259 SVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 259 ~i~~wd~~~~~~~~~~~~~ 277 (290)
.|+.||.++|+.+.+++..
T Consensus 495 ~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp EEEEEETTTCCEEEEEECS
T ss_pred eEEEEECCCCCEEEEeeCC
Confidence 9999999999999988743
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.00 E-value=1.9e-06 Score=71.01 Aligned_cols=216 Identities=11% Similarity=-0.019 Sum_probs=134.4
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 142 (290)
.+..+|.+..+ .+.++++- ...|+..++........+.. ...+..++|++....|+.+ ...+.|+.+++......
T Consensus 33 ~d~~~C~~~~~-~~~ll~~~--~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGP-EPVLLFAN--RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSS-CCEEEEEC--BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCccccccc-CceeEeec--ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 34456666666 55555543 35688888876554444443 3457899999866655554 45788999998876655
Q ss_pred EEEecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCC-CeEEEEc
Q 022910 143 CTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDD-ATLRVWN 219 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d-g~i~i~d 219 (290)
..+.........+++.+.+. ++++-...+.|.+.++........+...-.....+++.|.+..|+.+ ... +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 44443334467889987554 44555567899999987654333333344567899999966655544 444 7899998
Q ss_pred CCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
+..... ..+... .....+.++++|++..|+.+ ...+.|..+++........+........+|++
T Consensus 189 ~dG~~~-~~~~~~--~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav 253 (349)
T 3v64_C 189 MDGSGR-RIIADT--HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 253 (349)
T ss_dssp TTSCSC-EESCCS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred CCCCCc-EEEEEC--CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE
Confidence 864332 333211 23457899999866555554 45678999998643332223322334455554
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.99 E-value=2.4e-06 Score=77.54 Aligned_cols=212 Identities=8% Similarity=0.008 Sum_probs=137.7
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCC----eeeeeeccccCCEEEEEECCCCCEEEE-EeCCCcEEEEcCC
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLLAS-GGLDGLVQIWDPS 137 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~ 137 (290)
....+.+|+|.+..+.++++-...+.|+.+++... .....+.........|++.+.++.|+. -...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34567789998866777777777788988888753 222333323345678899877765554 4557899999988
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCe
Q 022910 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDAT 214 (290)
Q Consensus 138 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~ 214 (290)
.......+.........|++.|...+|+.+.. .+.|.+.++........+...-.....|++.+.+..|+.+ ...+.
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 65544444445556899999997666666553 3689999987655444444444678999999866666655 45678
Q ss_pred EEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
|..+++........+.... .-.....|++.. +.++++-...+.|...+..+|+.+..+..
T Consensus 582 I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEK-RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp EEEEETTSCSCEEEEECTT-TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEEecCCCceEEEecCCC-ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 9999986554444443211 123345666643 34555555678899999888876666643
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=4.6e-07 Score=73.73 Aligned_cols=198 Identities=13% Similarity=0.061 Sum_probs=123.3
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeee---cc-ccCCEEEEEECC-CCCEEEEEeC------------
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI---QG-HKDSVSSLAFSM-DGQLLASGGL------------ 127 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~-~~~~i~~~~~~~-~~~~l~~~~~------------ 127 (290)
..+.++++.+.++.++++.. .+.|..++..++...... .+ .......+++.+ +|+.+++-..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 35788999874455554433 345888887654322111 11 123578899999 8886665432
Q ss_pred -----CCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEe-eCCCeEEEEECCccc--EEEeeecCCCCeEEEEE
Q 022910 128 -----DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDF 199 (290)
Q Consensus 128 -----dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~ 199 (290)
.+.|..|+..+++....... ......++++|+++.|+++ +..+.|.+|++.... ....+..... ...+++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 36788898877764433222 2235679999999866655 556899999987521 1111211223 788999
Q ss_pred cCCCCEEEEEeC----------CCeEEEEcCCCCeeeEEEeCCCCc-ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 200 TPDGKTICTGSD----------DATLRVWNPKSGENIHVIRGHPYH-TEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 200 ~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
.++|+++++... .+.|..+|.. ++.+..+...... ...++.+++ .+++++++....+.|.++++..
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 999987776544 4678899874 6666666543211 234666666 3566666666678899998753
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.94 E-value=9.6e-09 Score=92.34 Aligned_cols=218 Identities=10% Similarity=0.014 Sum_probs=131.1
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccC----CeeeeeeccccCCEEEEEECCCCCE-EEEEeCCCcEEEEcCCCCc
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSSGN 140 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~ 140 (290)
.+.+|+|.+..+.++++-...+.|+.+++.. ......+.........|++.+.+.. +++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 4567889885666666666678899998875 2222222212223456788755544 4444557889999987655
Q ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEE-EEEeCCCeEEE
Q 022910 141 LKCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CTGSDDATLRV 217 (290)
Q Consensus 141 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i 217 (290)
....+.........|+++|.+.+|+.+.. .+.|.++++........+...-.....|+|+|++..| ++-+..+.|.+
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 44444333345678899997665555543 2678888876433222222223456789999865544 55556788999
Q ss_pred EcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEE
Q 022910 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~ 285 (290)
+++..... ..+............|++..+ .++++....+.|..++..+++.+..+.......++|+
T Consensus 567 ~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 567 IDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp ECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCC
T ss_pred EccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEE
Confidence 99865433 333321111223345555543 4555556678999999888988887764333344443
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.93 E-value=4.7e-06 Score=76.28 Aligned_cols=216 Identities=11% Similarity=0.064 Sum_probs=141.8
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc--------ccCCEEEEEECCCCCEEEEEeCCCcEEEEc
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG--------HKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (290)
...|.++...+ ++.+. .|+.++-|..|+..+++....... ....|.++...++++.|.+|+.++-|.+|+
T Consensus 356 ~~~V~~i~~d~-~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDK-DKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECT-TSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECC-CCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 45689999887 55444 566677799999877654432211 235789999988888566777767799999
Q ss_pred CCCCceEEEEe----cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee------cCCCCeEEEEEcCCCCE
Q 022910 136 PSSGNLKCTLE----GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 136 ~~~~~~~~~~~----~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~ 205 (290)
..+++...... .....|.++...+++++.+.. . +-|.+|+..+++...... .....|.++...+++++
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 88876543221 134569999998888755544 4 458889988765433221 12357899999988876
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeC----CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc----C
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRG----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS----H 277 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~----~ 277 (290)
.+.. . +-|..|+..+++. .+.. .......|.++...++|.+.++.. . -|..|+..+++.. .+.. .
T Consensus 512 Wigt-~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~gl~ 584 (795)
T 4a2l_A 512 WIGG-E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIK-RYNTTNGLP 584 (795)
T ss_dssp EEEE-S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEE-EECGGGTCS
T ss_pred EEEe-C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEE-EeCCCCCCc
Confidence 5554 4 4588899877654 3321 112345789999999888666543 3 5888998766543 3321 1
Q ss_pred CCcEEEEEEecCC
Q 022910 278 TDSIECIGFSRSE 290 (290)
Q Consensus 278 ~~~v~~i~~s~d~ 290 (290)
...|.++...++|
T Consensus 585 ~~~i~~i~~d~~g 597 (795)
T 4a2l_A 585 NNVVYGILEDSFG 597 (795)
T ss_dssp CSCEEEEEECTTS
T ss_pred hhheEEEEECCCC
Confidence 3467777766554
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=4.9e-06 Score=76.22 Aligned_cols=217 Identities=13% Similarity=0.095 Sum_probs=142.9
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec------cccCCEEEEEECCCCCEEEEEeCCCcEEEEcCC
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ------GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (290)
...|.++...+ .+.+. .|+.++-|..|+..+........ .....|.++...+++. |..|+.++-|..|+..
T Consensus 309 ~~~i~~i~~D~-~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 309 QRSVRSIFMDS-QGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPI 385 (795)
T ss_dssp SSCEEEEEECT-TSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTT
T ss_pred CCcEEEEEEeC-CcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCC
Confidence 35789998887 44444 56666778888876554322111 1245699999988876 4456667679999988
Q ss_pred CCceEEEEec--------CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee----cCCCCeEEEEEcCCCCE
Q 022910 138 SGNLKCTLEG--------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS----GHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 138 ~~~~~~~~~~--------~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~ 205 (290)
+++....... ....|.++...++++.|.+|+.++-|.+|+..+++...... .....|.++...+++++
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 7765432211 23568999998888857777777789999998776433221 13457899999888875
Q ss_pred EEEEeCCCeEEEEcCCCCeeeEEEeCC----CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc------
Q 022910 206 ICTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV------ 275 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~------ 275 (290)
.+.. .. .|.+|+..+++.. .+... ......|.++...++|.+.+... +-|..|+..+++. .+.
T Consensus 466 wigt-~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~ 538 (795)
T 4a2l_A 466 WLGT-LS-ALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVS 538 (795)
T ss_dssp EEEE-SS-CEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSC
T ss_pred EEEe-cC-ceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCC
Confidence 5544 44 5889998876543 22211 11335789999999888766554 5688899877665 332
Q ss_pred -cCCCcEEEEEEecCC
Q 022910 276 -SHTDSIECIGFSRSE 290 (290)
Q Consensus 276 -~~~~~v~~i~~s~d~ 290 (290)
.+...|.+|...++|
T Consensus 539 ~l~~~~i~~i~~d~~g 554 (795)
T 4a2l_A 539 NVTKLFTNCIYEASNG 554 (795)
T ss_dssp GGGGSCEEEEEECTTS
T ss_pred CCCCCeeEEEEECCCC
Confidence 123467888776654
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.91 E-value=3.3e-06 Score=70.53 Aligned_cols=213 Identities=10% Similarity=-0.037 Sum_probs=132.0
Q ss_pred EEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceEEEE
Q 022910 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~ 145 (290)
-.|.+..+ .+.++++. ...|+.+++........+. ....+..++|.+.+..|+.+ ...+.|+.+++........+
T Consensus 79 ~~C~~~~~-~~~l~~~~--~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 79 RSCKALGP-EPVLLFAN--RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCEEECSS-CCEEEEEC--BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred CeECCccc-cceeEeec--CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 34555555 45555443 3678888887765544444 33457899999766655544 45788999998876654444
Q ss_pred ecCCCCEEEEEEcCCCC-EEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEcCCC
Q 022910 146 EGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DD-ATLRVWNPKS 222 (290)
Q Consensus 146 ~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~ 222 (290)
.........+++.+.+. ++++-...+.|.+.++........+.........|++.|.+..|+.+. .. +.|..+++..
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 43333456788887554 445555577899998876543333443445679999999766665544 34 7899998865
Q ss_pred CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
......+.. .....+.|+|+|++..|+.+ +..+.|..+++........+........+|++
T Consensus 235 ~~~~~~~~~---~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav 296 (386)
T 3v65_B 235 SGRRIIADT---HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 296 (386)
T ss_dssp CSCEEEECS---SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE
T ss_pred CCcEEEEEC---CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE
Confidence 443333322 23457899999865555544 55678999998644333233322334455554
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.90 E-value=1.6e-06 Score=67.60 Aligned_cols=187 Identities=14% Similarity=0.242 Sum_probs=125.0
Q ss_pred eeccccCCEEEEEECCCCCEE-EEEeCCCcEEEEcCCCCceEEEEecC-CCCEEEEEEcCCCCEEEEeeCCCeEEEEECC
Q 022910 102 EIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLKCTLEGP-GGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (290)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~ 179 (290)
.+.+-...+..++|+|+++.| ++...++.|...|.. ++.+..+... ....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344555679999999987654 456778899999988 8887777532 2468889999888776766667889999876
Q ss_pred cccE---EEeee------cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCC---CCeeeEEEeC----CCCcccCeEEEE
Q 022910 180 RAAY---LNMFS------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK---SGENIHVIRG----HPYHTEGLTCLT 243 (290)
Q Consensus 180 ~~~~---~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~----~~~~~~~v~~~~ 243 (290)
.... +.... ..+.....|+|+|.++.|+++.......+|.+. ....+..+.. .......+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 234456899999998878777765554555443 1112222211 011234578999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEEccCC---------CcEEEEEEecCC
Q 022910 244 ISA-DSTLALSGSKDGSVHMVNITTGKVVSSLVSHT---------DSIECIGFSRSE 290 (290)
Q Consensus 244 ~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---------~~v~~i~~s~d~ 290 (290)
++| .+++++.......|..+|.. ++++..+.-.. ..--+|+|.|+|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 999 55677777777889999965 66776665332 256789998876
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=1.4e-07 Score=84.62 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=130.3
Q ss_pred EEEEecCCCcEEEEEccCCeeeeeeccccCC----------E-EEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEec
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDS----------V-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~----------i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (290)
.+++++.++.|..+|..+++.+.++...... + ..+.+ .+..+++++.++.|..+|..+++.+-.+..
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 4455666889999999999988776532110 0 11222 356788888999999999999999877764
Q ss_pred CCC-CEEEEEEcC--CCCEEEEeeC------CCeEEEEECCcccEEEeeecCC---------------------------
Q 022910 148 PGG-GVEWVSWHP--RGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHG--------------------------- 191 (290)
Q Consensus 148 ~~~-~i~~i~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~--------------------------- 191 (290)
... ....+..+| .+..++++.. +|.|+.+|.++++.+-++....
T Consensus 146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~ 225 (668)
T 1kv9_A 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (668)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence 211 000011111 1345555543 5899999999999887664211
Q ss_pred ----CCeEEEEEcCCCCEEEEEeCCCe-------------------EEEEcCCCCeeeEEEeCCCCcc-------cCeEE
Q 022910 192 ----SSVTCGDFTPDGKTICTGSDDAT-------------------LRVWNPKSGENIHVIRGHPYHT-------EGLTC 241 (290)
Q Consensus 192 ----~~i~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~~~~~~-------~~v~~ 241 (290)
.....+++.|...++++++.++. |..+|..+++.+..++... |. .+...
T Consensus 226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~~~~~~~~~ 304 (668)
T 1kv9_A 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDFTATQQITL 304 (668)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCCCCSCEEE
T ss_pred CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-CccccccCCCCcEE
Confidence 01124678888888988887763 9999999999988877532 11 22222
Q ss_pred EEEcCCCC---EEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 242 LTISADST---LALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 242 ~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
..+..+|+ .|+.++.+|.++++|..+|+++..+.
T Consensus 305 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 305 AELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 23333565 78899999999999999999986554
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.89 E-value=2.6e-07 Score=83.99 Aligned_cols=194 Identities=12% Similarity=0.073 Sum_probs=115.1
Q ss_pred CEEEEEEC-CCCCcEEE-EecCCC----cEEEEEccCC-eeeee-eccccCCEEEEEECCCCCEEEEEeCC-----CcEE
Q 022910 66 EVYSVACS-PTDATLVA-TGGGDD----KGFFWRINQG-DWASE-IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQ 132 (290)
Q Consensus 66 ~v~~~~~~-~~~~~~l~-~~~~dg----~i~iw~~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~ 132 (290)
.+...+|+ | ++++|| +...+| +|+++++.++ +.+.. +. .....+.|+|+++.|+....+ ..|+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 9 555444 444333 4999999988 63221 21 113468899999988877664 3688
Q ss_pred EEcCCCCce--EEEEec-CCCCEEEEEEcCCCCEEEEeeC---CCeEEEEECCcc--cE--EEeeecCCCCeEEEEEcCC
Q 022910 133 IWDPSSGNL--KCTLEG-PGGGVEWVSWHPRGHIVLAGSE---DSTVWMWNADRA--AY--LNMFSGHGSSVTCGDFTPD 202 (290)
Q Consensus 133 i~d~~~~~~--~~~~~~-~~~~i~~i~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~~~~~~i~~~~~~~~ 202 (290)
++++.++.. ...+.. .......+.|+|++++|+..+. ...|+++|+.++ .. .............+.|+..
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGT 330 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETT
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeC
Confidence 888887642 233332 2234677899999998887653 346899999875 22 2222333455566665544
Q ss_pred CCEEEEEeCC----CeEEEEcCCCCeeeEE-EeCCCCcccCeEEEEEcCCCCEEEEEeCCCc--EEEEEc
Q 022910 203 GKTICTGSDD----ATLRVWNPKSGENIHV-IRGHPYHTEGLTCLTISADSTLALSGSKDGS--VHMVNI 265 (290)
Q Consensus 203 ~~~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--i~~wd~ 265 (290)
+.+++.+..+ ..|..+++.++..... +..+. ....+..+.+. .+.++++...+|. |+++++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~-~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS-EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC-SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC-CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 4444444433 3677788765322122 22211 12245556665 3455666666774 556665
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.88 E-value=3.7e-06 Score=68.16 Aligned_cols=193 Identities=13% Similarity=0.190 Sum_probs=129.2
Q ss_pred CcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCC----CC---EEEEEeC---CCcEEEEcC--CCCceEEE
Q 022910 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMD----GQ---LLASGGL---DGLVQIWDP--SSGNLKCT 144 (290)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---dg~i~i~d~--~~~~~~~~ 144 (290)
..+++.....+-+.+||+ +++.+..+.. +.++.+..-|. ++ ++++... +++|.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666667788999999 7888887763 55666666552 22 2233333 578999966 3443 444
Q ss_pred Eec-------CCCCEEEEEE--cCC-CC-EEEEeeCCCeEEEEECC-------cccEEEeeecCCCCeEEEEEcCCCCEE
Q 022910 145 LEG-------PGGGVEWVSW--HPR-GH-IVLAGSEDSTVWMWNAD-------RAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (290)
Q Consensus 145 ~~~-------~~~~i~~i~~--~~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l 206 (290)
+.. ....+..+++ +|. +. ++++...+|.+..|.+. +.+.++++.. .+.+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 421 1134556777 664 43 68888889999999983 3456777764 5678899999988999
Q ss_pred EEEeCCCeEEEEcCC-----CCeeeEEEeCCCCcccCeEEEEEc--CCCC-EEEEEe-CCCcEEEEEcC-CCcEEEEEc
Q 022910 207 CTGSDDATLRVWNPK-----SGENIHVIRGHPYHTEGLTCLTIS--ADST-LALSGS-KDGSVHMVNIT-TGKVVSSLV 275 (290)
Q Consensus 207 ~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~-~dg~i~~wd~~-~~~~~~~~~ 275 (290)
+++-.+.-|..|+.. +++.+..+.. ......+..|++- ++++ +|++++ .++++.+||.. +.+.+..|.
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~-g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADG-RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSS-SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecC-CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 999999888888855 2344444332 1133468888884 4555 666665 57799999996 778888875
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=2.5e-06 Score=72.26 Aligned_cols=218 Identities=10% Similarity=0.125 Sum_probs=131.1
Q ss_pred CEEEEEECC-CCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC-C----cEEEEcCCCC
Q 022910 66 EVYSVACSP-TDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD-G----LVQIWDPSSG 139 (290)
Q Consensus 66 ~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g----~i~i~d~~~~ 139 (290)
....|+++| .++.++++-.. +.|+.+++..+....... .......++|++++++|+++... + .+.+++. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457889998 35665555444 889999988766544433 44567899999999966666542 2 2333432 23
Q ss_pred ceE--EEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEeeec-CCCCeEEEEEcCCCCEEE-EEeCCCe
Q 022910 140 NLK--CTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSG-HGSSVTCGDFTPDGKTIC-TGSDDAT 214 (290)
Q Consensus 140 ~~~--~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~-~~~~dg~ 214 (290)
... ..+.. ......++++| ++.++++-...+.|+.++...+........ .......|+|+|++++|+ +-...+.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 22322 23356788999 677676666788999999987654222221 224578899999999555 4556788
Q ss_pred EEEEcCCC--Cee--eEEEeCCC---C---------cccCeE-EEEEc--------CCCCEEEEEeCCCcEEEEEcCCCc
Q 022910 215 LRVWNPKS--GEN--IHVIRGHP---Y---------HTEGLT-CLTIS--------ADSTLALSGSKDGSVHMVNITTGK 269 (290)
Q Consensus 215 i~i~d~~~--~~~--~~~~~~~~---~---------~~~~v~-~~~~~--------~~~~~l~~~~~dg~i~~wd~~~~~ 269 (290)
|+.++... +.. +..+.+.. . .-.... .++.. +++.++++-...+.|+.++ ..++
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 99987653 221 22222210 0 011223 45553 4466666666678899988 4564
Q ss_pred EEEEEccC---------C---------CcEEEEEEecC
Q 022910 270 VVSSLVSH---------T---------DSIECIGFSRS 289 (290)
Q Consensus 270 ~~~~~~~~---------~---------~~v~~i~~s~d 289 (290)
.. ++.+. . ...+.|++.|+
T Consensus 373 v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~ 409 (430)
T 3tc9_A 373 VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEE 409 (430)
T ss_dssp EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETT
T ss_pred EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECC
Confidence 43 33221 1 14788888873
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.85 E-value=2.1e-05 Score=63.79 Aligned_cols=177 Identities=11% Similarity=-0.012 Sum_probs=114.8
Q ss_pred CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCC----CceEEEEecCCCCEEEEEEcCCC
Q 022910 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSS----GNLKCTLEGPGGGVEWVSWHPRG 161 (290)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~i~~~~~~ 161 (290)
..|+..++........+. ....+..++|++.+..|+.+ ...+.|..+++.. ......+.........+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 578999998876555444 34567899999876655554 4568999999876 22222333232346788998755
Q ss_pred C-EEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEcCCCCeeeEEEeCCCCcccC
Q 022910 162 H-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D-ATLRVWNPKSGENIHVIRGHPYHTEG 238 (290)
Q Consensus 162 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (290)
. ++++-...+.|.++++........+.........+++.|.+..|+.+.. . +.|..+++.. .....+... .-..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~--~~~~ 165 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTE--NIQW 165 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECS--SCSC
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEEC--CCCC
Confidence 4 4455566789999998765444334434456789999996666655544 3 7898888854 333333221 2356
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEEcCC
Q 022910 239 LTCLTISADSTLALSG-SKDGSVHMVNITT 267 (290)
Q Consensus 239 v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~ 267 (290)
.+.++++|++..|+.+ +..+.|..+++..
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 7899999876655555 4567899999864
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=1.4e-05 Score=67.71 Aligned_cols=200 Identities=12% Similarity=0.133 Sum_probs=122.9
Q ss_pred CEEEEEECCC--CCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCC-----cEEEEcCCC
Q 022910 66 EVYSVACSPT--DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG-----LVQIWDPSS 138 (290)
Q Consensus 66 ~v~~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 138 (290)
....|+|.|+ ++.++++-.. +.|+.++..++....... .......++|+++++ |+.+...+ .+..++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 4568999983 4666655444 899999998776655443 445689999999999 44444321 133333222
Q ss_pred Cce-EEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECCcccEEEee-ec-CCCCeEEEEEcCCCCEEEE-EeCCC
Q 022910 139 GNL-KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF-SG-HGSSVTCGDFTPDGKTICT-GSDDA 213 (290)
Q Consensus 139 ~~~-~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~-~~~dg 213 (290)
+.. ...+. .......++++| ++.++++-..++.|+.++..++.....+ .. .......|+|+|++++|++ -...+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 11222 223456688999 6766666667789999999877652222 21 1223357999999995554 45578
Q ss_pred eEEEEcCC--CCee--eEEEeCC---C---------CcccCeEEEEE---------cCCCCEEEEEeCCCcEEEEEcCCC
Q 022910 214 TLRVWNPK--SGEN--IHVIRGH---P---------YHTEGLTCLTI---------SADSTLALSGSKDGSVHMVNITTG 268 (290)
Q Consensus 214 ~i~i~d~~--~~~~--~~~~~~~---~---------~~~~~v~~~~~---------~~~~~~l~~~~~dg~i~~wd~~~~ 268 (290)
.|+.+++. ++.. ...+.+. . ..-.....+++ .+++.++++-...+.|+.++. +|
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 89997754 3321 1222221 0 01124677899 777877777777889999984 56
Q ss_pred cE
Q 022910 269 KV 270 (290)
Q Consensus 269 ~~ 270 (290)
..
T Consensus 375 ~v 376 (433)
T 4hw6_A 375 RV 376 (433)
T ss_dssp EE
T ss_pred CE
Confidence 43
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.79 E-value=2.3e-05 Score=65.70 Aligned_cols=187 Identities=12% Similarity=0.005 Sum_probs=123.0
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCC----ceEEEEecCCC
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSG----NLKCTLEGPGG 150 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~----~~~~~~~~~~~ 150 (290)
...++++. ...|+..++........+. ....+..++|++....|+.+ ...+.|+.+++... .....+.....
T Consensus 83 ~~~ll~~~--~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 83 IAYLFFTN--RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp SCEEEEEE--TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred cceeEEec--cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 33444443 3788888888765544444 44568899999876666555 45678988988752 23334443445
Q ss_pred CEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC--CCeEEEEcCCCCeeeE
Q 022910 151 GVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIH 227 (290)
Q Consensus 151 ~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~ 227 (290)
....+++.+. ++++++-...+.|.+.++........+.........|++.|.+.+|+.... .+.|...++.......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 6788999874 445555556789999999876655555444556899999997666665542 3789999986544333
Q ss_pred EEeCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCC
Q 022910 228 VIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTG 268 (290)
Q Consensus 228 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~ 268 (290)
.+.. .-...+.|++++++..|+.+ ...+.|..+++...
T Consensus 240 ~~~~---~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LVTE---NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EECS---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEC---CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 3332 23567899999876666655 44678999998643
No 276
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.77 E-value=2.4e-06 Score=75.21 Aligned_cols=193 Identities=16% Similarity=0.154 Sum_probs=128.9
Q ss_pred EEEEecC-CCcEEEEEc-cCCeeeeeeccccC-----------CEEEEEECCCCCE----EEEEeCCCcEEEEcCCCCce
Q 022910 79 LVATGGG-DDKGFFWRI-NQGDWASEIQGHKD-----------SVSSLAFSMDGQL----LASGGLDGLVQIWDPSSGNL 141 (290)
Q Consensus 79 ~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~-----------~i~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~~ 141 (290)
.+++++. ++.|.-+|. .+++.+.++..... ....+++.|.+.. |++++.++.|..+|..+++.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 4445555 789999999 89988877653211 0123455444444 88888899999999999998
Q ss_pred EEEEecCCC----CEEE-EEEcCCCCEEEEee------CCCeEEEEECCcccEEEeeecCCCC-----------------
Q 022910 142 KCTLEGPGG----GVEW-VSWHPRGHIVLAGS------EDSTVWMWNADRAAYLNMFSGHGSS----------------- 193 (290)
Q Consensus 142 ~~~~~~~~~----~i~~-i~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~----------------- 193 (290)
+-....... .+.+ ..+. ++ .+++++ .+|.|+.+|.++++.+-++......
T Consensus 144 ~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 144 VWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 876653220 1111 1111 34 555555 3799999999999987665532111
Q ss_pred --------------------e-EEEEEcCCCCEEEEEeCC----------------CeEEEEcCCCCeeeEEEeCCCCcc
Q 022910 194 --------------------V-TCGDFTPDGKTICTGSDD----------------ATLRVWNPKSGENIHVIRGHPYHT 236 (290)
Q Consensus 194 --------------------i-~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~~~ 236 (290)
+ ..+++.+...+++.++.+ +.|..+|..+++.+..++... |.
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~-~d 300 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP-HD 300 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST-TC
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC-Cc
Confidence 0 134566777788887765 389999999999988877542 21
Q ss_pred --------cCeEEEEEc-CCC---CEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 237 --------EGLTCLTIS-ADS---TLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 237 --------~~v~~~~~~-~~~---~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
.++ -+... .+| ..++.++.+|.++++|..+|+++....
T Consensus 301 ~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 301 EWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 112 12222 467 578889999999999999999988765
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=9.2e-06 Score=74.25 Aligned_cols=217 Identities=12% Similarity=0.080 Sum_probs=134.8
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeee---ccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI---QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (290)
...|.++...+ ++.+. .|+.++-|.+|+..++...... ......|.++...+++.+. +|+..+-|..++..+++
T Consensus 362 ~~~v~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 362 NKVVSSVCDDG-QGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSCEEEEEECT-TSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCE
T ss_pred CcceEEEEEcC-CCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCc
Confidence 35688998887 44444 4555566888887654432211 1234678999988777644 46666668999987765
Q ss_pred eEEEEe--cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecC-----CCCeEEEEEcCCCCEEEEEeCCC
Q 022910 141 LKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH-----GSSVTCGDFTPDGKTICTGSDDA 213 (290)
Q Consensus 141 ~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg 213 (290)
...... .....|.++...+++.+.+ |+. +-|..|+..+++........ ...|.++...++|++.+ |+..+
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~ 515 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGG 515 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCC
Confidence 433221 1345799999888776444 455 56899998876543322211 46789999998887555 44434
Q ss_pred eEEEEcCCCCeeeEEEeC-CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc----CCCcEEEEEEec
Q 022910 214 TLRVWNPKSGENIHVIRG-HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS----HTDSIECIGFSR 288 (290)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~v~~i~~s~ 288 (290)
-|..||..+++. ..+.. .......|.++...++|.+.++. ..|.|..||..+++. ..+.. ....|.++...+
T Consensus 516 Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~ 592 (781)
T 3v9f_A 516 GVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDK 592 (781)
T ss_dssp CEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECS
T ss_pred CEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECC
Confidence 478899876653 33332 11234568999998888866654 466658888876653 22321 123466665554
Q ss_pred C
Q 022910 289 S 289 (290)
Q Consensus 289 d 289 (290)
+
T Consensus 593 ~ 593 (781)
T 3v9f_A 593 N 593 (781)
T ss_dssp S
T ss_pred C
Confidence 4
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.74 E-value=1.7e-05 Score=64.35 Aligned_cols=204 Identities=8% Similarity=-0.007 Sum_probs=123.3
Q ss_pred CcEEEEecCCCcEEEEEccCCe--eeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCCce-EEEEecCCCCE
Q 022910 77 ATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNL-KCTLEGPGGGV 152 (290)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~-~~~~~~~~~~i 152 (290)
+.+|++. ...|+..++.... ....+. .......+.|.+....|+.+ ...+.|..+++..... ...+.......
T Consensus 5 p~ll~~~--~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 5 PLLLYAN--RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp CEEEEEC--EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred cEEEEEc--cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 3445443 4678999987753 222222 22356789999865555444 5578899999876642 22233333346
Q ss_pred EEEEEcCCC-CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe--CCCeEEEEcCCCCeeeEEE
Q 022910 153 EWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS--DDATLRVWNPKSGENIHVI 229 (290)
Q Consensus 153 ~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~ 229 (290)
..+++.+.+ +++++-...+.|.++++........+.........+++.|.+..|+.+. ..+.|..+++..... ..+
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~ 160 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FII 160 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEE
Confidence 678888744 4555555678999999876543333334455678999999766666555 257899998864333 333
Q ss_pred eCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEEEccCCCcEEEEEE
Q 022910 230 RGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (290)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~ 286 (290)
... .-...+.++++|++..|+.+ +..+.|..+++........+........++++
T Consensus 161 ~~~--~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav 216 (318)
T 3sov_A 161 INS--EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL 216 (318)
T ss_dssp ECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE
T ss_pred EEC--CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 211 23457899999966555554 45678999998643322222222334455554
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.73 E-value=8.9e-06 Score=72.09 Aligned_cols=209 Identities=11% Similarity=-0.012 Sum_probs=131.5
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee-eeeeccccCCEEEEEECCCCCEEEE-EeCCCcEEEEcCCCCce
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLAS-GGLDGLVQIWDPSSGNL 141 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~ 141 (290)
-+.+.+++|++.++.++++-...+.|..+++..... ...+...-.....+++.+.+..|+. -...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345789999987777777777778899888876532 2233323356789999986665544 45678999999876554
Q ss_pred EEEEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEE
Q 022910 142 KCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVW 218 (290)
Q Consensus 142 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~ 218 (290)
...+.........|++.|.+.+|+.+.. .+.|...++............-.....|++++.+..|+.+ ...+.|..+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 4344344455778999997666665553 4678878876544333333344567899999976666544 456789999
Q ss_pred cCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
++............ ......+++..+ .++++-...+.|...|..+++.+..+..
T Consensus 199 ~~dG~~~~~~~~~~---~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~ 252 (619)
T 3s94_A 199 NLDGTNRQAVVKGS---LPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHS 252 (619)
T ss_dssp SSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCS
T ss_pred cCCCCccEEEEeCC---CCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEec
Confidence 99765443333211 122345677655 4444555678899999988876665544
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.72 E-value=3.6e-05 Score=61.87 Aligned_cols=207 Identities=10% Similarity=0.031 Sum_probs=131.0
Q ss_pred ccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeee-ecc----c--cCCEEEEEE---CCCCCEEEEEe----
Q 022910 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQG----H--KDSVSSLAF---SMDGQLLASGG---- 126 (290)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~~l~~~~---- 126 (290)
....----+++|.+..+.++++.-..++|..|+...+..... +.. . ...+..|.| .|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 333334457899886666776666899999999875543332 221 1 114689999 58877776543
Q ss_pred ---------CCCcEEEEcCC---CCceEEEEec-------------CCCCEEEEEEcCCCCEEEEeeCC-CeEEEEECCc
Q 022910 127 ---------LDGLVQIWDPS---SGNLKCTLEG-------------PGGGVEWVSWHPRGHIVLAGSED-STVWMWNADR 180 (290)
Q Consensus 127 ---------~dg~i~i~d~~---~~~~~~~~~~-------------~~~~i~~i~~~~~~~~l~~~~~d-g~i~i~d~~~ 180 (290)
.+..|..||+. +++.+..... .......++..++|+..++++.. +.|..++...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 25779999999 7877655431 11247899999999999999888 8888888764
Q ss_pred ccEEEeee-----cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeee-EEEe--CCCCcccCeEEE-EEcCCCCE-
Q 022910 181 AAYLNMFS-----GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENI-HVIR--GHPYHTEGLTCL-TISADSTL- 250 (290)
Q Consensus 181 ~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~--~~~~~~~~v~~~-~~~~~~~~- 250 (290)
.....-+. ......+.|+++|+++.|++....|.|..+|+.+.... ..+. +....-.....| ..-.+|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 43221111 11223679999999999988877999999999853320 1111 211111233443 22236777
Q ss_pred EEEEeCCCcEEEEEcCC
Q 022910 251 ALSGSKDGSVHMVNITT 267 (290)
Q Consensus 251 l~~~~~dg~i~~wd~~~ 267 (290)
|++....+.+.+.+...
T Consensus 249 lV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 249 LVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEETTEEEEEECSST
T ss_pred EEEcCCCCEEEEECCCC
Confidence 45555566666665443
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.69 E-value=5.2e-05 Score=67.32 Aligned_cols=206 Identities=10% Similarity=-0.050 Sum_probs=138.0
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEE-EeCCCcEEEEcCCCCceEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLAS-GGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~ 143 (290)
..+.+|+|.+.++.++++-..++.|+.+++........+.........+++.+.+..|+. -...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 467899999977788888888899999998765443333322245678888876655544 4556889999987654433
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEcC
Q 022910 144 TLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP 220 (290)
Q Consensus 144 ~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~ 220 (290)
.+.........|++.|....|+.+.. .+.|...++.......... .-.....|++++.+..|+.+ ...+.|..+++
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 33344456899999996666665553 5688888887554333333 44567899999976666554 55678999998
Q ss_pred CCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
..... ..+.. .......+++.. +.++++-...+.|...|..+++....+..
T Consensus 196 dG~~~-~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 196 LGLNR-EVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp TSCSC-EEEEE---CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCce-EEeec---cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 76444 33332 223456777765 45555555678999999877775555544
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=3e-05 Score=66.28 Aligned_cols=207 Identities=14% Similarity=0.105 Sum_probs=125.7
Q ss_pred CEEEEEECCC-CCcEEEEecCCCcEEEEEccCCeeeeeeccc---cCCEEEEEE-------CCCCCEEEEEeCCC-----
Q 022910 66 EVYSVACSPT-DATLVATGGGDDKGFFWRINQGDWASEIQGH---KDSVSSLAF-------SMDGQLLASGGLDG----- 129 (290)
Q Consensus 66 ~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~~l~~~~~dg----- 129 (290)
....|+|.|. .++++++....+.|++.|+..+.....+... ......++| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 5666666665577999998887665544321 235899999 99999777766544
Q ss_pred --cEEEEcCCC-CceE-----EEEecCCCCEEEEEEcC-CCCEEEEeeCCCeEEEEECC-------cccE----------
Q 022910 130 --LVQIWDPSS-GNLK-----CTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNAD-------RAAY---------- 183 (290)
Q Consensus 130 --~i~i~d~~~-~~~~-----~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~---------- 183 (290)
.|.+++... +... ..+.... ....++++| ++.++++-...+.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665433 2221 2222212 245678899 45566666678899999987 4432
Q ss_pred -EEe-ee-cCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEcC--CCCee--eEEEeCC---CC---------cccCeE-EE
Q 022910 184 -LNM-FS-GHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP--KSGEN--IHVIRGH---PY---------HTEGLT-CL 242 (290)
Q Consensus 184 -~~~-~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~--~~~~~--~~~~~~~---~~---------~~~~v~-~~ 242 (290)
... +. +.....+.|+|+|++++|+.+ +....|+.++. ..+.. ...+.+. .. .-.... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 21 223456899999999965544 56778988654 33322 1233221 00 011234 45
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 243 TIS-------ADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 243 ~~~-------~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
+.. +++.++++=....+|+.++ .+|. +.++.
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 554 4667777777788999998 4564 44443
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=6.9e-05 Score=68.49 Aligned_cols=219 Identities=11% Similarity=0.108 Sum_probs=135.6
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeee--------------ccccCCEEEEEECCCCCEEEEEeCCC
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI--------------QGHKDSVSSLAFSMDGQLLASGGLDG 129 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (290)
...|.++...+ ++.+. .|+..+-|.+++..+....... ......|.++...+++. |..|+.++
T Consensus 257 ~~~i~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLK-DNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGG 333 (781)
T ss_dssp CCCEEEEEECT-TSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSS
T ss_pred CceEEEEEECC-CCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCC
Confidence 35688888876 54444 4555456888888765432211 11345799999988876 55566566
Q ss_pred cEEEEcCCCCceEEEEe---------cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEee---ecCCCCeEEE
Q 022910 130 LVQIWDPSSGNLKCTLE---------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCG 197 (290)
Q Consensus 130 ~i~i~d~~~~~~~~~~~---------~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~ 197 (290)
-|..++..+........ .....|.++...+++. |.+|+.++-|..|+..++...... ......|.++
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 68889887655432211 1234689999888776 445665566889998765432211 1234678999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccC
Q 022910 198 DFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 198 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
...+++.+ .+|+.++-|..|+..+++. ..+.........|.++...+++.+.+ |+. +-|.+|+..+++........
T Consensus 413 ~~d~~g~l-Wigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 413 LKDSEGNL-WFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EECTTSCE-EEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred EECCCCCE-EEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 88877764 4567667799999877654 23321112346789999888877555 444 56889998776543332222
Q ss_pred -----CCcEEEEEEecCC
Q 022910 278 -----TDSIECIGFSRSE 290 (290)
Q Consensus 278 -----~~~v~~i~~s~d~ 290 (290)
...|.++...++|
T Consensus 489 ~~~~~~~~i~~i~~d~~g 506 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEG 506 (781)
T ss_dssp TSSCSCSCEEEEEECTTC
T ss_pred ccccccceeEEEEEcCCC
Confidence 3567887766553
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.66 E-value=8.1e-05 Score=67.66 Aligned_cols=180 Identities=10% Similarity=-0.004 Sum_probs=116.5
Q ss_pred CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEE-eCCCcEEEEcCCCC----ceEEEEecCCCCEEEEEEcCC
Q 022910 86 DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHPR 160 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~i~~~~~ 160 (290)
...|+..++........+. ....+..|+|.+....|+.+ ...+.|+.+++... .....+.........|++.+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 3568888887655444443 34567899999866555544 45678888888753 233334434445678999877
Q ss_pred CCE-EEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEcCCCCeeeEEEeCCCCccc
Q 022910 161 GHI-VLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DD-ATLRVWNPKSGENIHVIRGHPYHTE 237 (290)
Q Consensus 161 ~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~ 237 (290)
+.. +++-...+.|.+.++........+.........|++.|...+|+.+. .. +.|.+.++........+.. ...
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---~l~ 558 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQ 558 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCS
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---CCC
Confidence 654 44555678999999986654444444455689999999766666554 33 7899999865444333332 335
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCc
Q 022910 238 GLTCLTISADSTLALSG-SKDGSVHMVNITTGK 269 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~ 269 (290)
..+.|++++.+..|+.+ ...+.|..+++....
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 68899999866655555 445689999986443
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=1.5e-05 Score=70.09 Aligned_cols=198 Identities=16% Similarity=0.195 Sum_probs=126.1
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeeeeeccccCC---------EEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEe
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 146 (290)
++.++++ +..+.|.-+|..+++.+.++...... ...+.+ .+..+++++.++.|..+|..+++.+-.+.
T Consensus 68 ~g~vyv~-~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVT-ASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEE-ETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEE-cCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 4444444 44344999999999988776533211 011222 35678888889999999999999887765
Q ss_pred cCCC----CEE---EEEEc-CCCC-EEEEeeC------CCeEEEEECCcccEEEeeecCCCCe-----------------
Q 022910 147 GPGG----GVE---WVSWH-PRGH-IVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSV----------------- 194 (290)
Q Consensus 147 ~~~~----~i~---~i~~~-~~~~-~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i----------------- 194 (290)
.... .+. .+.=. .+++ .+++++. +|.|+.+|..+++.+-........+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 4320 111 11111 1223 5666653 7899999999998776543211000
Q ss_pred ------------------------EEEEEcCCCCEEEEEeC--------------------C----CeEEEEcCCCCeee
Q 022910 195 ------------------------TCGDFTPDGKTICTGSD--------------------D----ATLRVWNPKSGENI 226 (290)
Q Consensus 195 ------------------------~~~~~~~~~~~l~~~~~--------------------d----g~i~i~d~~~~~~~ 226 (290)
..+++.|...+++++.. | +.|..+|..+++.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 13456677777877663 2 58999999999998
Q ss_pred EEEeCCCCcc-------cCeEEEEEc-CCC---CEEEEEeCCCcEEEEEcCCCcEEEEEccC
Q 022910 227 HVIRGHPYHT-------EGLTCLTIS-ADS---TLALSGSKDGSVHMVNITTGKVVSSLVSH 277 (290)
Q Consensus 227 ~~~~~~~~~~-------~~v~~~~~~-~~~---~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 277 (290)
..++... |. ....-+... .+| ..|+.++.+|.++++|..+|+++..+...
T Consensus 305 W~~q~~~-~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 305 WFYQHTP-NDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp EEEESST-TCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEeCCC-CCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 8876432 11 111112221 466 47888999999999999999999877643
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.61 E-value=1.6e-06 Score=78.91 Aligned_cols=154 Identities=14% Similarity=0.188 Sum_probs=97.8
Q ss_pred CEEEEEEC-CCCCEEEEEeC-CC----cEEEEcCCCC-ceEE-EEecCCCCEEEEEEcCCCCEEEEeeCC-----CeEEE
Q 022910 109 SVSSLAFS-MDGQLLASGGL-DG----LVQIWDPSSG-NLKC-TLEGPGGGVEWVSWHPRGHIVLAGSED-----STVWM 175 (290)
Q Consensus 109 ~i~~~~~~-~~~~~l~~~~~-dg----~i~i~d~~~~-~~~~-~~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i 175 (290)
.+...+|| |+|++||.+.. +| .|+++|+.++ +.+. .+.. ....+.|+|+++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998876543 23 4999999998 6321 1111 12457899999888877654 36888
Q ss_pred EECCcccE--EEeee-cCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEcCCCCe-ee--EEEeCCCCcccCeEEEEEcC
Q 022910 176 WNADRAAY--LNMFS-GHGSSVTCGDFTPDGKTICTGSD---DATLRVWNPKSGE-NI--HVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 176 ~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~-~~--~~~~~~~~~~~~v~~~~~~~ 246 (290)
+++.+++. ...+. ........+.|+|+|++|+..+. ...|+++|+.++. .. ..+... .......+.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR--EKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC--CTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC--CCCceEEEeeee
Confidence 99877642 22222 22334677899999999886553 3468889988752 22 333221 234455666555
Q ss_pred CCCEEEEEeCC----CcEEEEEcCC
Q 022910 247 DSTLALSGSKD----GSVHMVNITT 267 (290)
Q Consensus 247 ~~~~l~~~~~d----g~i~~wd~~~ 267 (290)
.+.+++....+ ..|..+++.+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 45555555443 3677777764
No 287
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.61 E-value=1.3e-05 Score=70.51 Aligned_cols=193 Identities=12% Similarity=0.128 Sum_probs=125.5
Q ss_pred EEEEecC-CCcEEEEEc-cCCeeeeeeccccC----------C-EEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEE
Q 022910 79 LVATGGG-DDKGFFWRI-NQGDWASEIQGHKD----------S-VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 79 ~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~----------~-i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (290)
.+++++. ++.|.-+|. .+++.+.++..... . ...+.. .+..+++++.++.|..+|..+++.+-.+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 3445555 789999999 89988876642211 0 011222 3567888888999999999999988776
Q ss_pred ecCCC----CEEE-EEEcCCCCEEEEeeC------CCeEEEEECCcccEEEeeecCCCC---------------------
Q 022910 146 EGPGG----GVEW-VSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSS--------------------- 193 (290)
Q Consensus 146 ~~~~~----~i~~-i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~--------------------- 193 (290)
..... .+.+ ... .+..+++++. ++.|+.+|.++++.+-++......
T Consensus 142 ~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~ 219 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp ECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred cCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccc
Confidence 53220 1111 111 1345555554 799999999999987765532110
Q ss_pred -----------------eEEEEEcCCCCEEEEEeCC----------------CeEEEEcCCCCeeeEEEeCCCC------
Q 022910 194 -----------------VTCGDFTPDGKTICTGSDD----------------ATLRVWNPKSGENIHVIRGHPY------ 234 (290)
Q Consensus 194 -----------------i~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~------ 234 (290)
...+++.+....++.++.+ +.|..+|..+++.+..++....
T Consensus 220 g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~ 299 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA 299 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred ccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccc
Confidence 0235667766777776642 3699999999999888764320
Q ss_pred -cccCeEEEEEcCCCC---EEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 235 -HTEGLTCLTISADST---LALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 235 -~~~~v~~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
...++ -+...++|+ .++.++.+|.++++|..+|+++..+..
T Consensus 300 ~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 300 GVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred cCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 11222 122224673 677889999999999999999887753
No 288
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.60 E-value=0.00028 Score=62.64 Aligned_cols=207 Identities=10% Similarity=0.031 Sum_probs=133.3
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc------ccCCEEEEEECCCCCEEE-EEeCCCcEEEEcCC
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPS 137 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~ 137 (290)
..+.+|+|.+.++.++.+-...+.|+.++.........+.. ....+..+++...++.|+ +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 45788999987777777777778898888765432222321 234678999988766554 55567889999986
Q ss_pred CCceEEEE-ecCCCCEEEEEEcCC-CCEEEEeeCCC--eEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe-CC
Q 022910 138 SGNLKCTL-EGPGGGVEWVSWHPR-GHIVLAGSEDS--TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DD 212 (290)
Q Consensus 138 ~~~~~~~~-~~~~~~i~~i~~~~~-~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d 212 (290)
++....+ .......+.|+++|. +.++++-.... .|...++............-.....|++.+....|+.+. ..
T Consensus 420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp -SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred -CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 4444333 334567899999994 54444433222 577777764433333333345678999999877776554 46
Q ss_pred CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
+.|..+++... ....+... ......++++.. +.++++=...+.|...+..+|+....+..
T Consensus 499 ~~I~~~~~dG~-~r~~~~~~--~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i~~ 558 (628)
T 4a0p_A 499 RRIESSDLSGA-NRIVLEDS--NILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKVQA 558 (628)
T ss_dssp TEEEEEETTSC-SCEEEECS--SCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEEEC
T ss_pred CEEEEEeCCCC-ceEEEEcC--CCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEEec
Confidence 88999998543 34444421 233456777764 55555555677898899887776555543
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.58 E-value=4.7e-06 Score=74.64 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=73.2
Q ss_pred EEEECCCCCcEEEEecCCC-----------cEEEEEccCCeeee--eec-cccCCEEEEEECCCCCEEEEEeC-CCcEEE
Q 022910 69 SVACSPTDATLVATGGGDD-----------KGFFWRINQGDWAS--EIQ-GHKDSVSSLAFSMDGQLLASGGL-DGLVQI 133 (290)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg-----------~i~iw~~~~~~~~~--~~~-~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i 133 (290)
++++.|.++++++.|+.+. .+.+||..+++... .+. .+.....++++.++++.+++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4455554667777776542 58899988876433 222 12233445778889999999884 568999
Q ss_pred EcCCCCceEEEEecCCC-CEEEEEEcCCCCEEEEee-CC-----CeEEEEECCccc
Q 022910 134 WDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGS-ED-----STVWMWNADRAA 182 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~ 182 (290)
||..+.+....-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99987754432221211 123455667899999988 34 468999987654
No 290
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=5.9e-06 Score=70.03 Aligned_cols=153 Identities=8% Similarity=0.107 Sum_probs=100.5
Q ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeCC-C----eEEEEECCccc
Q 022910 109 SVSSLAFSM-DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED-S----TVWMWNADRAA 182 (290)
Q Consensus 109 ~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-g----~i~i~d~~~~~ 182 (290)
....|+++| ++..|+++...+.|+.+++..+....... .......++|++++++|+++... + .+.+++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 346889998 45566666655889999988766544433 45568899999999966666542 2 3444443 232
Q ss_pred EE--EeeecCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEE-EEeCCC
Q 022910 183 YL--NMFSGHGSSVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDG 258 (290)
Q Consensus 183 ~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg 258 (290)
.. ..+.. ......++++| ++.++++-...+.|+.|+...+......... .......++|+|++++|+ +-...+
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECCCC
Confidence 11 22221 23456788999 7777777777889999999876543332221 224577899999999554 445677
Q ss_pred cEEEEEcC
Q 022910 259 SVHMVNIT 266 (290)
Q Consensus 259 ~i~~wd~~ 266 (290)
.|+.++..
T Consensus 293 ~I~~~~~d 300 (430)
T 3tc9_A 293 YILRSDYD 300 (430)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 89998765
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.57 E-value=2.3e-05 Score=62.99 Aligned_cols=158 Identities=8% Similarity=0.075 Sum_probs=110.2
Q ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEcCCCCceEEEEecC-----C--CCEEEEEE---cCCCCEEEEee----------
Q 022910 110 VSSLAFSMDGQLLASGG-LDGLVQIWDPSSGNLKCTLEGP-----G--GGVEWVSW---HPRGHIVLAGS---------- 168 (290)
Q Consensus 110 i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-----~--~~i~~i~~---~~~~~~l~~~~---------- 168 (290)
--+++|.+....|+.++ ..++|..|+...+......-.. . ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34688987666666665 6899999999766544332111 1 13578999 68877777644
Q ss_pred ---CCCeEEEEECC---cccEEEeee--c-----------CCCCeEEEEEcCCCCEEEEEeCC-CeEEEEcCCCCeeeEE
Q 022910 169 ---EDSTVWMWNAD---RAAYLNMFS--G-----------HGSSVTCGDFTPDGKTICTGSDD-ATLRVWNPKSGENIHV 228 (290)
Q Consensus 169 ---~dg~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~ 228 (290)
.+..|..||+. +++.+.... . .......++..++|+..++++.. +.|..++.... .+..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEee
Confidence 25779999999 776554433 1 11347899999999999999988 99888887644 3332
Q ss_pred Ee-CC--CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 022910 229 IR-GH--PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (290)
Q Consensus 229 ~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 268 (290)
+. .. .......+.|+++|+|..|++....|.|..+|+.+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 22 11 112335779999999999988877999999998743
No 292
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.56 E-value=8.1e-05 Score=59.92 Aligned_cols=188 Identities=14% Similarity=0.078 Sum_probs=111.9
Q ss_pred cCEEEEEECCCCCcEEEEecCC--CcEEEEEccCCeeeeeec-cccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCce
Q 022910 65 DEVYSVACSPTDATLVATGGGD--DKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (290)
....++++.+ +++++++.... ..|..++..+++...... ........++..+.+..+++-...+.|+++|..+++.
T Consensus 72 ~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 4678999999 55565554332 246667777766543222 1122334555555554455544688999999876432
Q ss_pred -EEEEe---------cCCCCEEEEEEcCCCCEEEEe-eCCCeEEEEECCc-ccE--EEeeecCCCCeEEEEEcCCCCEEE
Q 022910 142 -KCTLE---------GPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADR-AAY--LNMFSGHGSSVTCGDFTPDGKTIC 207 (290)
Q Consensus 142 -~~~~~---------~~~~~i~~i~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~l~ 207 (290)
+.... ........+ +|+++.|+++ ...+.|..|++.. ++. ...+.. ......+++.++|++++
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEE
Confidence 11111 111234555 7787766555 4568899999874 321 111111 13456788999998877
Q ss_pred EEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEc---CCCCEEEEEeCCC
Q 022910 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS---ADSTLALSGSKDG 258 (290)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg 258 (290)
+....+.|.+++.. ++... +..........++++|. |+++.|++++..+
T Consensus 228 a~~~~~~V~~~~~~-G~~~~-~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 228 ATHIYNSVVRIAPD-RSTTI-IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECBTTCCEEEECTT-CCEEE-EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EeCCCCeEEEECCC-CCEEE-EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 77778899999975 54422 22211123568999998 8877777766543
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.54 E-value=0.00017 Score=58.69 Aligned_cols=192 Identities=9% Similarity=0.110 Sum_probs=109.8
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEcc-CCe-eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRIN-QGD-WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (290)
+.+..+.+.+ .+.+++++. +|.| |... .++ ...........+..+.+.+++.+++++...+.++-+|- .+..-
T Consensus 122 ~~~~~i~~~~-~~~~~~~~~-~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMITN-VGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAW 196 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEET-TCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSC
T ss_pred CCeEEEEEEC-CCCEEEEeC-CccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCce
Confidence 3467777765 556666554 4543 3222 222 22222345567899999998887777654433333442 12221
Q ss_pred EEE-ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeec----CCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 022910 143 CTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG----HGSSVTCGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 143 ~~~-~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i 217 (290)
..+ ......+..+.+.+++..++ ++.+|.+++.....++.-..+.. ....+..+.+.+++.+++++ .+|.| +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~ 273 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-L 273 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-E
T ss_pred eECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-E
Confidence 222 23445688999999887654 45568887775443443333221 22358899999877766665 46766 3
Q ss_pred EcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
+....++....+.........+..+.|.+++. +++++.+|.|..++-
T Consensus 274 ~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 274 CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 44445555444442111235677888875554 556677888776653
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.50 E-value=0.00052 Score=60.85 Aligned_cols=215 Identities=8% Similarity=-0.012 Sum_probs=130.5
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCC-EEEEEeCCCcEEEEcCCCCceEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
..+.+++|.+.++.++++-...+.|+.+++........+...-.....+++...+. .+++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 35678889886677777776778888888876443333332334567888986555 44444567889999987654433
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEeeC--CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEcC
Q 022910 144 TLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP 220 (290)
Q Consensus 144 ~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~ 220 (290)
.+.........|++.|....|+.+.. .+.|...++............-.....|++++.+..|+.+ +..+.|..+++
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 33334456899999997555555443 3678777776543333333334567899999876666655 45678999998
Q ss_pred CCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEE
Q 022910 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECI 284 (290)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i 284 (290)
........+.....+ ...+++..+ .++++-...+.|...+..++.. ..+......+..|
T Consensus 509 dG~~~~~~~~~~l~~---P~glav~~~-~ly~tD~~~~~I~~~~k~~g~~-~~~~~~~~~~~~i 567 (619)
T 3s94_A 509 DGTGRRVLVEDKIPH---IFGFTLLGD-YVYWTDWQRRSIERVHKRSAER-EVIIDQLPDLMGL 567 (619)
T ss_dssp SSCCCEEEEECCCCS---SCCEEEETT-EEEEECTTSSCEEEEESSSCCE-EEEECSCCCEEEE
T ss_pred CCCceEEEeccCCCC---cEEEEEECC-EEEEeecCCCeEEEEEcCCCce-EEEecCCCCCcee
Confidence 654433333322113 234555433 4444444567888888887743 3333333344444
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.49 E-value=0.00014 Score=61.55 Aligned_cols=204 Identities=14% Similarity=0.195 Sum_probs=118.5
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEecCC---Cc-EEEEEccCCee-eeeeccccCCEEEEEECC-CCCEEEEEeCCCcEE
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATGGGD---DK-GFFWRINQGDW-ASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQ 132 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~d---g~-i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 132 (290)
.+........+++|++ ++.++++.... .. +..++...+.. ...+. .-.....++++| ++.++++-...+.|+
T Consensus 176 ~~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~ 253 (433)
T 4hw6_A 176 IKTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMIS 253 (433)
T ss_dssp EECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEE
T ss_pred EeecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEE
Confidence 3333445578899998 44555554321 12 32333222111 01111 223446688999 666555555678899
Q ss_pred EEcCCCCceEEEE-ec-CCCCEEEEEEcCCCCEEEEe-eCCCeEEEEECCc--ccE--EEeeec---------------C
Q 022910 133 IWDPSSGNLKCTL-EG-PGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADR--AAY--LNMFSG---------------H 190 (290)
Q Consensus 133 i~d~~~~~~~~~~-~~-~~~~i~~i~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~~---------------~ 190 (290)
.++..++.....+ .. .......++|+|++++|+.+ ...+.|+.+++.. +.. ...+.+ .
T Consensus 254 ~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~ 333 (433)
T 4hw6_A 254 SYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGAR 333 (433)
T ss_dssp EECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSB
T ss_pred EEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceE
Confidence 9999877763322 22 12233579999999955554 4567899988652 221 111111 1
Q ss_pred CCCeEEEEE---------cCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC---------------cccCeEEEEEc-
Q 022910 191 GSSVTCGDF---------TPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY---------------HTEGLTCLTIS- 245 (290)
Q Consensus 191 ~~~i~~~~~---------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~~~v~~~~~~- 245 (290)
-.....+++ .+++.++++-...+.|+.++. ++.. .++.+... .-.....|+++
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred EcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence 124677999 777777777777889999986 5543 34332210 11236788888
Q ss_pred CCCCEEEEEeCCCcEEEEEcC
Q 022910 246 ADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 246 ~~~~~l~~~~~dg~i~~wd~~ 266 (290)
+++.++++=...++|+.+++.
T Consensus 412 ~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 412 KRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEecC
Confidence 566666666667788877753
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.49 E-value=0.00015 Score=59.63 Aligned_cols=218 Identities=11% Similarity=0.116 Sum_probs=120.2
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCee--eeeec---cccCCEEEEEECCC---CCEEEEEeC-C-----C
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW--ASEIQ---GHKDSVSSLAFSMD---GQLLASGGL-D-----G 129 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~---~~~~~i~~~~~~~~---~~~l~~~~~-d-----g 129 (290)
-..-..++|.| ++.++++ ...|.|++++ .++. +..+. ........|+|+|+ +.+|+++.. . +
T Consensus 30 l~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 34567999999 6666655 4569999988 3332 11111 12456889999998 555555443 2 5
Q ss_pred cEEEEcCCCCce-----E-EEEe---cCCCCEEEEEEcCCCCEEEEeeC-------------CCeEEEEECCcc------
Q 022910 130 LVQIWDPSSGNL-----K-CTLE---GPGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRA------ 181 (290)
Q Consensus 130 ~i~i~d~~~~~~-----~-~~~~---~~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~------ 181 (290)
.|..|+...+.. + ..+. ........++|.|+|.++++.+. .|.|..++....
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 688888764421 1 1122 11112467999999976666432 256666665431
Q ss_pred ------cEEEeeecCCCCeEEEEEcC-CCCEEEEEeCCCe--------EEEEcCCC--------C--------eeeEEEe
Q 022910 182 ------AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDDAT--------LRVWNPKS--------G--------ENIHVIR 230 (290)
Q Consensus 182 ------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~--------i~i~d~~~--------~--------~~~~~~~ 230 (290)
.....+...-.....++|+| .+.++++-..... |.+...-. + .+...+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 00111111123457789999 6666655433332 33332111 0 0111111
Q ss_pred CCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc----E--EEEEccCCCcEEEEEEecCC
Q 022910 231 GHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK----V--VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 231 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~----~--~~~~~~~~~~v~~i~~s~d~ 290 (290)
.......++| .+|.++++.-..+.|...++.... . ...+......++.+++.|||
T Consensus 266 ----~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 266 ----QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp ----TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred ----CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 2234567777 367777766667788888776432 1 22222223678999999986
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.42 E-value=0.00043 Score=56.30 Aligned_cols=214 Identities=16% Similarity=0.110 Sum_probs=117.4
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe---eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (290)
...+.+|.|.+ +..++++ ..+.|.. ....++ .+.....+...+..+.+.+++..++++ ..|.|..- ...++
T Consensus 79 ~~~~~~i~~~~--~~~~~~g-~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWIVG-EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGK 152 (327)
T ss_dssp CCEEEEEEEET--TEEEEEE-ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTS
T ss_pred CccEEEEEecC--CeEEEEE-CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCC
Confidence 34688899876 3445444 4554432 222232 111111233457788877666666555 45544332 23343
Q ss_pred eEEEE-ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEEC--CcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 022910 141 LKCTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNA--DRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 141 ~~~~~-~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 217 (290)
.-... ......+..+.+.+++.+++++...+..+-.|- .+-+.+. ......+..+.+.+++.++ +++.+|.+++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 33222 334457899999998888877755444444442 2223332 2345678899999988755 4456788877
Q ss_pred EcCCCCeeeEEEeCC-CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc---CCCcEEEEEEec
Q 022910 218 WNPKSGENIHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS---HTDSIECIGFSR 288 (290)
Q Consensus 218 ~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~v~~i~~s~ 288 (290)
.....++....+... ......+..+.+.+++.+++++. +|.| ++....|+.-..+.. ....+.++.|.+
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~ 302 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS 302 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC
Confidence 643223332222211 01223588899998877776654 6766 345555554444432 234567777754
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.34 E-value=0.00039 Score=56.94 Aligned_cols=209 Identities=11% Similarity=0.111 Sum_probs=121.6
Q ss_pred eeccCCcCEEEEEECCCCCcEEEEe------------cCCCcEEEEEccCC--eee-eeecc-----ccCCEEEEEECC-
Q 022910 59 IFSGHSDEVYSVACSPTDATLVATG------------GGDDKGFFWRINQG--DWA-SEIQG-----HKDSVSSLAFSM- 117 (290)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~------------~~dg~i~iw~~~~~--~~~-~~~~~-----~~~~i~~~~~~~- 117 (290)
.+.+-....-.++..| ++.+++++ ..+|.|.++|+.+. +.. ..+.+ .......+.+.+
T Consensus 44 ~i~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 44 LVKGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp ECTTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC
T ss_pred EeCCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC
Confidence 3444233445666777 56555554 26899999998742 211 12222 234677788765
Q ss_pred -CCC-EEEEEeC---CCcEEEEcCCCCce----EEEEec-CCCCEEEEEEcCCCCEEEEee-----------------CC
Q 022910 118 -DGQ-LLASGGL---DGLVQIWDPSSGNL----KCTLEG-PGGGVEWVSWHPRGHIVLAGS-----------------ED 170 (290)
Q Consensus 118 -~~~-~l~~~~~---dg~i~i~d~~~~~~----~~~~~~-~~~~i~~i~~~~~~~~l~~~~-----------------~d 170 (290)
++. +|+++.. ..+|.+|++..... +..+.+ .-...+.+.+.++|.++++.. ..
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 454 4555432 46777877654322 223332 223678999999998777654 12
Q ss_pred CeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEcCCC-Cee--eEEEeCCCCcccCeEEEEEcC
Q 022910 171 STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKS-GEN--IHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 171 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~~~~~~~~v~~~~~~~ 246 (290)
|.|+.++.. + +..+...-.....++|+|+++.|+++. ..+.|..|++.. +.. ...+. .......+++.+
T Consensus 203 g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~----~~g~PDGi~vD~ 275 (355)
T 3sre_A 203 SFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS----FDTLVDNISVDP 275 (355)
T ss_dssp EEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE----CSSEEEEEEECT
T ss_pred cEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe----CCCCCceEEEeC
Confidence 456666553 2 222222234568999999998887654 578999999863 322 22332 245678899999
Q ss_pred -CCCEEEEEeCC-CcEEEEEcC--CCcEEEEEc
Q 022910 247 -DSTLALSGSKD-GSVHMVNIT--TGKVVSSLV 275 (290)
Q Consensus 247 -~~~~l~~~~~d-g~i~~wd~~--~~~~~~~~~ 275 (290)
+|++.+++..+ +.|..|+.. .+..+.++.
T Consensus 276 e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 276 VTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp TTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 59888866544 355555543 244555544
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.31 E-value=0.00017 Score=58.51 Aligned_cols=160 Identities=14% Similarity=0.232 Sum_probs=108.2
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEEecCCCCEEEEEEcCC----CC---EEEEeeC---CCeEEEEECC--cccEEEe
Q 022910 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPR----GH---IVLAGSE---DSTVWMWNAD--RAAYLNM 186 (290)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~----~~---~l~~~~~---dg~i~i~d~~--~~~~~~~ 186 (290)
..+++.....+-|.+||+ +++.++.+.. +.++.+..-|. ++ ++++... +++|.+|++. +++ +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 346666677788999999 8888888754 55777777663 22 2333333 5789999773 333 444
Q ss_pred eec------CC-CCeEEEEE--cCC-CC-EEEEEeCCCeEEEEcCC-------CCeeeEEEeCCCCcccCeEEEEEcCCC
Q 022910 187 FSG------HG-SSVTCGDF--TPD-GK-TICTGSDDATLRVWNPK-------SGENIHVIRGHPYHTEGLTCLTISADS 248 (290)
Q Consensus 187 ~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (290)
+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++.+. ..+.+-.+...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~----lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK----MNSQTEGMAADDEY 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE----CSSCEEEEEEETTT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec----CCCCcceEEEcCCC
Confidence 421 11 55677787 774 44 67888889999999883 334556665 35678899999988
Q ss_pred CEEEEEeCCCcEEEEEcC-----CCcEEEEEc-cC-CCcEEEEEE
Q 022910 249 TLALSGSKDGSVHMVNIT-----TGKVVSSLV-SH-TDSIECIGF 286 (290)
Q Consensus 249 ~~l~~~~~dg~i~~wd~~-----~~~~~~~~~-~~-~~~v~~i~~ 286 (290)
..|+.+-.+.-|..|+.. +++++..+. ++ ...+..|++
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE
Confidence 899999998778888865 355666553 21 236777776
No 300
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.31 E-value=8e-05 Score=66.66 Aligned_cols=188 Identities=15% Similarity=0.167 Sum_probs=111.9
Q ss_pred EEEEEECCCCCcEEEEecC-CCcEEEEEccCCeeeeeeccccC-CEEEEEECCCCCEEEEEe-CC-----CcEEEEcCCC
Q 022910 67 VYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASGG-LD-----GLVQIWDPSS 138 (290)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~ 138 (290)
..++++.+ ++.+++.|+. +..+.+||..+.+....-..+.. .-.++++.++++.++.|+ .+ ..+.+||..+
T Consensus 245 ~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 245 CPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 34566777 7778888874 45899999988765543222221 123456667899888888 34 5689999877
Q ss_pred CceEEE-------------------------EecCC---------------------------------------CCEEE
Q 022910 139 GNLKCT-------------------------LEGPG---------------------------------------GGVEW 154 (290)
Q Consensus 139 ~~~~~~-------------------------~~~~~---------------------------------------~~i~~ 154 (290)
++.... +-+.. ..-.+
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 643321 00000 01122
Q ss_pred EEEc-CCCCEEEEeeCCC-----------eEEEEECCcccEEEee--ecCCC-CeEEEEEcCCCCEEEEEeCC-------
Q 022910 155 VSWH-PRGHIVLAGSEDS-----------TVWMWNADRAAYLNMF--SGHGS-SVTCGDFTPDGKTICTGSDD------- 212 (290)
Q Consensus 155 i~~~-~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~-~i~~~~~~~~~~~l~~~~~d------- 212 (290)
+.|. .+++++++|+.++ .|.+||..+....... ..... .-.++...|+++++++|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCC
Confidence 3332 2567778877532 6788888776644432 11122 22345667899999998754
Q ss_pred ----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC
Q 022910 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 213 ----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (290)
..+.+||..+.+- ..+..............+.|++++++.|+.
T Consensus 484 ~~~~~~v~~ydp~t~~W-~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDTF-YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTEE-EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccceEEEcCCCCce-eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 4689999876542 223222212223345566789999999985
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.25 E-value=0.001 Score=53.17 Aligned_cols=211 Identities=13% Similarity=0.126 Sum_probs=136.2
Q ss_pred EEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEEEEecC
Q 022910 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP 148 (290)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~ 148 (290)
.-.+| ..+.+|.-. ..++.+|++++...++.+.- ...|.--.|-... .|+..+ +..|+-|++.. ..+.+.+..|
T Consensus 72 AIMnP-~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 72 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeCC-CccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 34588 666666544 58899999999888887773 4578888886444 455444 46799999974 4566666544
Q ss_pred ----CCCEEEEEEcCCCCEEEEeeC-------CCeEEEEECCcccEEEeeecCCCCeEEEEEcC--CC-CEEEEEeC---
Q 022910 149 ----GGGVEWVSWHPRGHIVLAGSE-------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP--DG-KTICTGSD--- 211 (290)
Q Consensus 149 ----~~~i~~i~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~-~~l~~~~~--- 211 (290)
...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+.+|......+.+.- .. .+|+.+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 345667777888888776543 377889998754 3455566654433332221 11 12322222
Q ss_pred CCeEEEEcCCCC---ee------eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEE
Q 022910 212 DATLRVWNPKSG---EN------IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIE 282 (290)
Q Consensus 212 dg~i~i~d~~~~---~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 282 (290)
.+.++|.++... .. +..+........-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|.
T Consensus 226 g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 258999887432 11 111111122344567888888778899999999999999999999987776556665
Q ss_pred EEEE
Q 022910 283 CIGF 286 (290)
Q Consensus 283 ~i~~ 286 (290)
.-+-
T Consensus 306 ~ta~ 309 (365)
T 2xzh_A 306 VTAP 309 (365)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 4443
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.0013 Score=56.21 Aligned_cols=205 Identities=12% Similarity=0.079 Sum_probs=119.1
Q ss_pred CEEEEEE-------CCCCCcEEEEecCCCc------EEEEEccC-Ceee-----eeeccccCCEEEEEECCCCC-EEEEE
Q 022910 66 EVYSVAC-------SPTDATLVATGGGDDK------GFFWRINQ-GDWA-----SEIQGHKDSVSSLAFSMDGQ-LLASG 125 (290)
Q Consensus 66 ~v~~~~~-------~~~~~~~l~~~~~dg~------i~iw~~~~-~~~~-----~~~~~~~~~i~~~~~~~~~~-~l~~~ 125 (290)
....|+| ++++..++++...++. |.+++... +... ..+... .....++++|++. ++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEE
Confidence 5789999 9844446655544422 55665333 2221 122222 2345778899544 55556
Q ss_pred eCCCcEEEEcCC-------CCce-----------EEE-Eec-CCCCEEEEEEcCCCCEEEEe-eCCCeEEEEECC--ccc
Q 022910 126 GLDGLVQIWDPS-------SGNL-----------KCT-LEG-PGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNAD--RAA 182 (290)
Q Consensus 126 ~~dg~i~i~d~~-------~~~~-----------~~~-~~~-~~~~i~~i~~~~~~~~l~~~-~~dg~i~i~d~~--~~~ 182 (290)
...+.|..+++. ++.. ... +.. .......|+|+|+++.|+.+ +....|+.++.. .+.
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~ 345 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKE 345 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcce
Confidence 677889999987 5543 112 222 23446899999999965555 456788886653 322
Q ss_pred E--EEeeecC---------------CCCeE-EEEEc-------CCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCC----
Q 022910 183 Y--LNMFSGH---------------GSSVT-CGDFT-------PDGKTICTGSDDATLRVWNPKSGENIHVIRGHP---- 233 (290)
Q Consensus 183 ~--~~~~~~~---------------~~~i~-~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 233 (290)
. ...+-+. -.... .++.. +.+.++++=.....|+.++. ++. +.++.+..
T Consensus 346 ~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~ 423 (496)
T 3kya_A 346 FITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTS 423 (496)
T ss_dssp ECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHH
T ss_pred ecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEeccccccc
Confidence 1 0122111 01234 45554 45677777777889999994 554 44443320
Q ss_pred -------C----------cccCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEE
Q 022910 234 -------Y----------HTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSS 273 (290)
Q Consensus 234 -------~----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~ 273 (290)
. .-.....|+++++ +.++++=....+|+.+++.....+..
T Consensus 424 ~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 424 LADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp HHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred ccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence 0 1124678999986 77776666778999999876555443
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.23 E-value=6.8e-06 Score=73.93 Aligned_cols=178 Identities=10% Similarity=-0.009 Sum_probs=108.0
Q ss_pred CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe-CCCcEEEEcCCC----CceEEEEecCCCCEEEEEEcCC
Q 022910 86 DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQIWDPSS----GNLKCTLEGPGGGVEWVSWHPR 160 (290)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~----~~~~~~~~~~~~~i~~i~~~~~ 160 (290)
.+.|+..++........+.. ...+..|+|.+.+..|+.+. ..+.|+.+++.. ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35788888877665544443 33567899998777666654 457899998875 2222222222223456788754
Q ss_pred C-CEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEcCCCCeeeEEEeCCCCccc
Q 022910 161 G-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D-ATLRVWNPKSGENIHVIRGHPYHTE 237 (290)
Q Consensus 161 ~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~ 237 (290)
+ +++++-...+.|.++++........+.........|++.|.+.+|+.+.. . +.|.++++..... ..+... ...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~--~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE--NIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCS--SCS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeC--CCC
Confidence 4 44455456788999998766544444333345678899996655554432 2 7888888754332 223211 234
Q ss_pred CeEEEEEcCCCCE-EEEEeCCCcEEEEEcCC
Q 022910 238 GLTCLTISADSTL-ALSGSKDGSVHMVNITT 267 (290)
Q Consensus 238 ~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~ 267 (290)
..+.|+|+|++.. +++-+..+.|.++++..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 4678999986554 44555567899999864
No 304
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.11 E-value=0.0028 Score=52.81 Aligned_cols=211 Identities=13% Similarity=0.124 Sum_probs=136.0
Q ss_pred EEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEEEEec
Q 022910 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEG 147 (290)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~ 147 (290)
+.-.+| ..+.+|.-. ..++.||++.+...++.+.- ...|.--.|-.. +.|+..+ +..|+-|++.. ..+...+..
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred eeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheec
Confidence 344678 556666543 58999999999888877763 446767777533 3455554 46799999974 356666654
Q ss_pred C----CCCEEEEEEcCCCCEEEEeeC-------CCeEEEEECCcccEEEeeecCCCCeEEEEEcCC--C-CEEEEEeC--
Q 022910 148 P----GGGVEWVSWHPRGHIVLAGSE-------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD--G-KTICTGSD-- 211 (290)
Q Consensus 148 ~----~~~i~~i~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~l~~~~~-- 211 (290)
| ...|..-..+++.++++..+- .|.+.+|..+.+. .+.+.+|......+.+.-+ . .+|+.+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 4 345777777888998776542 4778899987553 4555666554444433211 1 23333333
Q ss_pred -CCeEEEEcCCCC---ee---eEE---EeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcE
Q 022910 212 -DATLRVWNPKSG---EN---IHV---IRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI 281 (290)
Q Consensus 212 -dg~i~i~d~~~~---~~---~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v 281 (290)
.+.++|.++... .. .+. +........-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCce
Confidence 378999988543 11 111 11111234456788899888889999999999999999999988766555555
Q ss_pred EEEE
Q 022910 282 ECIG 285 (290)
Q Consensus 282 ~~i~ 285 (290)
..-+
T Consensus 304 F~t~ 307 (494)
T 1bpo_A 304 FVTA 307 (494)
T ss_dssp EEEE
T ss_pred EEec
Confidence 4433
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.10 E-value=0.0027 Score=52.14 Aligned_cols=220 Identities=10% Similarity=0.077 Sum_probs=123.6
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCe-eeeeec---cccCCEEEEEECCC---CCEEEEEeC----C----
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-WASEIQ---GHKDSVSSLAFSMD---GQLLASGGL----D---- 128 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~---~~~~~i~~~~~~~~---~~~l~~~~~----d---- 128 (290)
-.....++|.| ++.++++ ...|.|++++ ..++ .+..+. ........|+|+|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~p-dG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLG-GGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEE-TTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcC-CCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45678999999 6666655 4559999887 3444 222211 12356889999997 555555443 2
Q ss_pred CcEEEEcCCCC--c-----eE-EEEec-CCCCEEEEEEcCCCCEEEEeeC-------------CCeEEEEECCccc----
Q 022910 129 GLVQIWDPSSG--N-----LK-CTLEG-PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRAA---- 182 (290)
Q Consensus 129 g~i~i~d~~~~--~-----~~-~~~~~-~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~---- 182 (290)
..|..|+.... . .+ ..+.. .......|+|.|+|.++++.+. .|.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777776544 1 11 11221 1112467999999987776432 2456666654320
Q ss_pred ---EEEee-ecCCCCeEEEEEcC-CCCEEEEEeCCC---eEEEEcCCC--------C--------eeeEEEeCCCCcccC
Q 022910 183 ---YLNMF-SGHGSSVTCGDFTP-DGKTICTGSDDA---TLRVWNPKS--------G--------ENIHVIRGHPYHTEG 238 (290)
Q Consensus 183 ---~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~--------~--------~~~~~~~~~~~~~~~ 238 (290)
....+ .++ .....++|+| .++++++-.... .|.+...-. + .++..+.. ....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~---~~~a 260 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS---ETWA 260 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT---CCCC
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC---CCcC
Confidence 01111 122 3456899999 666555533222 244332110 0 11111110 2345
Q ss_pred eEEEEEc-------CCCCEEEEEeCCCcEEEEEcCCC-cEE--EEEc-cCCCcEEEEEEecCC
Q 022910 239 LTCLTIS-------ADSTLALSGSKDGSVHMVNITTG-KVV--SSLV-SHTDSIECIGFSRSE 290 (290)
Q Consensus 239 v~~~~~~-------~~~~~l~~~~~dg~i~~wd~~~~-~~~--~~~~-~~~~~v~~i~~s~d~ 290 (290)
...++|. .+|.++++.-..+.|...++... +.. ..+. .....+..+++.|||
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 7788884 46777777777788999998753 332 2332 224578999999986
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.09 E-value=0.00086 Score=55.66 Aligned_cols=147 Identities=14% Similarity=0.145 Sum_probs=97.3
Q ss_pred CCCCCEEEEEeCCCcEEEEcCCCCceEEEEecC----CCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc---------
Q 022910 116 SMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--------- 182 (290)
Q Consensus 116 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~--------- 182 (290)
+.++..++.+- ++.||.-++.....-+.++.. ...|..+..+|+|++||..+. ..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34566555544 477888777744444455443 235788999999999999876 578888876221
Q ss_pred ---EEEeeec------CCCCeEEEEEcC---CCCEEEEEeCCCeEEEEcCCCCe-eeEEEeCC------CCcccCeEEEE
Q 022910 183 ---YLNMFSG------HGSSVTCGDFTP---DGKTICTGSDDATLRVWNPKSGE-NIHVIRGH------PYHTEGLTCLT 243 (290)
Q Consensus 183 ---~~~~~~~------~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~------~~~~~~v~~~~ 243 (290)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++||+.... ....+... ......|.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 1122222 257899999999 45789999999999999998522 11233211 11225688999
Q ss_pred EcCCCCEEEEEe--CCCcEEEEE
Q 022910 244 ISADSTLALSGS--KDGSVHMVN 264 (290)
Q Consensus 244 ~~~~~~~l~~~~--~dg~i~~wd 264 (290)
|.+++-.|+..+ ..|.|+..-
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEES
T ss_pred EcCCCcEEEEEecCCCCCEEEEC
Confidence 998777666644 677776543
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.08 E-value=0.00081 Score=53.91 Aligned_cols=191 Identities=16% Similarity=0.251 Sum_probs=104.7
Q ss_pred CCcEEEEecCC----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC------CcEEEEcCCCCceEE
Q 022910 76 DATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDPSSGNLKC 143 (290)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~ 143 (290)
++.+++.|+.+ ..+.+||..+.+.... +.........+.+ +++.++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 55677777754 5688899888765432 2211122222233 66677777654 468899998876443
Q ss_pred EEecCC--CCEEEEEEcCCCCEEEEeeC---------CCeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEe
Q 022910 144 TLEGPG--GGVEWVSWHPRGHIVLAGSE---------DSTVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 144 ~~~~~~--~~i~~i~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
.-.... ....++.+ ++++++.|+. -..+.+||+.+.+-... +......-..+.+ ++++++.|+
T Consensus 133 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeC
Confidence 221111 11222222 5677777764 34588999987753332 2111122222333 566666665
Q ss_pred CC-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc--EEEEEc
Q 022910 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK--VVSSLV 275 (290)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~--~~~~~~ 275 (290)
.+ ..+.+||+.+.+ ...+...+........+.+ ++++++.|+.+ ..+.+||+.+.+ .+..+.
T Consensus 209 ~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp EETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred CCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 43 358899998754 2233222222223333333 67788888754 468999988754 444444
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.04 E-value=0.00059 Score=54.58 Aligned_cols=185 Identities=14% Similarity=0.193 Sum_probs=101.8
Q ss_pred CCcEEEEecCC-----CcEEEEEccCCe---eeee--eccccCCEEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCc
Q 022910 76 DATLVATGGGD-----DKGFFWRINQGD---WASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN 140 (290)
Q Consensus 76 ~~~~l~~~~~d-----g~i~iw~~~~~~---~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 140 (290)
++.+++.|+.+ ..+.+||+.+.+ .... +.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45677777754 368899988765 3322 2222222222333 56666666543 368899988776
Q ss_pred eEEEEecCC--CCEEEEEEcCCCCEEEEeeCC-----CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeC
Q 022910 141 LKCTLEGPG--GGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD 211 (290)
Q Consensus 141 ~~~~~~~~~--~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~ 211 (290)
....-.... ....++.+ ++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 443322111 11222222 67777777754 4588999887754332 2211122233333 5666677765
Q ss_pred C-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 212 d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
+ ..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..|.+||+.+.+
T Consensus 216 ~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCcE-EECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 3 4689999987643 233322212222233333 67777777765 368889987654
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.95 E-value=0.00086 Score=53.66 Aligned_cols=185 Identities=22% Similarity=0.304 Sum_probs=100.5
Q ss_pred CCcEEEEecCC-----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCCC-----cEEEEcCCCCceEE
Q 022910 76 DATLVATGGGD-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLDG-----LVQIWDPSSGNLKC 143 (290)
Q Consensus 76 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~ 143 (290)
++.+++.|+.+ ..+.+||..+.+.... +.........+.+ ++..++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 55677777754 3588899887664432 2211112222233 566777776543 57788988775443
Q ss_pred EEecC--CCCEEEEEEcCCCCEEEEeeCC-------CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 144 TLEGP--GGGVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 144 ~~~~~--~~~i~~i~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
.-... .....++.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 22111 111222222 56777777642 3588999987653332 2211222223333 56677777654
Q ss_pred -----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCc
Q 022910 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGK 269 (290)
Q Consensus 213 -----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~ 269 (290)
..+.+||+.+.+= ..+...+........+.+ ++++++.|+.++ .|.+||+.+.+
T Consensus 215 ~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAW-RQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCCE-eeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3688999987642 233322212222222333 677778877653 58999988764
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.94 E-value=0.0056 Score=50.27 Aligned_cols=220 Identities=11% Similarity=0.114 Sum_probs=120.4
Q ss_pred CcCEEEEEECCCCCc-EEEEecCCCcEEEEEccCCeee---eee----ccccCCEEEEEECCC---CCEEEEEeC-----
Q 022910 64 SDEVYSVACSPTDAT-LVATGGGDDKGFFWRINQGDWA---SEI----QGHKDSVSSLAFSMD---GQLLASGGL----- 127 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~---~~~----~~~~~~i~~~~~~~~---~~~l~~~~~----- 127 (290)
-.....|+|.| ++. ++++ ...|.|++++.. +... ..+ .........|+|+|+ +.+|+++..
T Consensus 17 l~~P~~i~~~p-dG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 17 LDHPWALAFLP-DNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp ESSEEEEEECS-TTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCcEEEEEcC-CCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 44668999999 666 6654 457999998853 3321 111 112346789999996 555554432
Q ss_pred ---CCcEEEEcCCCC--ce--EE-EEec------CCCCEEEEEEcCCCCEEEEeeC-------------CCeEEEEECCc
Q 022910 128 ---DGLVQIWDPSSG--NL--KC-TLEG------PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADR 180 (290)
Q Consensus 128 ---dg~i~i~d~~~~--~~--~~-~~~~------~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~ 180 (290)
...|..|++... .. .. .+.. .......|+|.|+|.++++.+. .|.|.-++...
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 235666665433 11 11 1111 1112457999999975555433 24677777653
Q ss_pred cc------------EEEeeecCCCCeEEEEEcC-CCCEEEEEeC-CCeEEEEcCCCCee---------------------
Q 022910 181 AA------------YLNMFSGHGSSVTCGDFTP-DGKTICTGSD-DATLRVWNPKSGEN--------------------- 225 (290)
Q Consensus 181 ~~------------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~-dg~i~i~d~~~~~~--------------------- 225 (290)
.- ....+...-.....++|.| .++++++-.. ++.=.|.-+..+..
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 20 1111221224578899999 5554444221 11112221111110
Q ss_pred ----------eEEEeCCCCcccCeEEEEEcC-------CCCEEEEEeCCCcEEEEEcCCCcEEEE--E-ccCCCcEEEEE
Q 022910 226 ----------IHVIRGHPYHTEGLTCLTISA-------DSTLALSGSKDGSVHMVNITTGKVVSS--L-VSHTDSIECIG 285 (290)
Q Consensus 226 ----------~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~~wd~~~~~~~~~--~-~~~~~~v~~i~ 285 (290)
+..+. +...+..+.|.. ++.++++.-..+.|...++..++.+.. + ......+..|+
T Consensus 254 ~~~~~~~~~P~~~~~----~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~ 329 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWK----DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVR 329 (353)
T ss_dssp BSSCTTSCCCSEEES----SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEE
T ss_pred CCCCCCccCCeEEeC----CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEE
Confidence 11111 223567788864 477777777788898888876654433 2 22235799999
Q ss_pred EecCC
Q 022910 286 FSRSE 290 (290)
Q Consensus 286 ~s~d~ 290 (290)
+.|||
T Consensus 330 ~~pdG 334 (353)
T 2g8s_A 330 TGPDG 334 (353)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 99986
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.89 E-value=0.0017 Score=51.86 Aligned_cols=185 Identities=17% Similarity=0.255 Sum_probs=100.3
Q ss_pred CCcEEEEec-CC-----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCc--
Q 022910 76 DATLVATGG-GD-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN-- 140 (290)
Q Consensus 76 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-- 140 (290)
++.+++.|+ .+ ..+.+||+.+.+.... +.........+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666666 32 3688999887764432 2211112222222 56677777654 468999998876
Q ss_pred -eEEEEecC--CCCEEEEEEcCCCCEEEEeeCC-----CeEEEEECCcccEEE--eeecCCCCeEEEEEcCCCCEEEEEe
Q 022910 141 -LKCTLEGP--GGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 141 -~~~~~~~~--~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
....-... ......+.+ ++.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++++++.|+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 43322111 111222222 57777777653 368899988765332 22212222223333 566667766
Q ss_pred CC-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
.+ ..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..|.+||+.+.+
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 54 4588999887643 233222212222233333 56777777764 468999987654
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.00027 Score=57.42 Aligned_cols=191 Identities=13% Similarity=0.052 Sum_probs=111.3
Q ss_pred cEEEEecCCCcEEEEEccCCeeeeeeccc-cCCEEEEEE--CCCCCEEEEE--eCCCcEEEEcCCCCceEEEEec----C
Q 022910 78 TLVATGGGDDKGFFWRINQGDWASEIQGH-KDSVSSLAF--SMDGQLLASG--GLDGLVQIWDPSSGNLKCTLEG----P 148 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~i~~~~~--~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~----~ 148 (290)
.+++.++.||.|.-+|..+|+.+..++.. ..++....- .+.+..++.+ +.||.|+.++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46778899999999999999999888744 122222111 0112234433 5799999999988855544432 1
Q ss_pred CCCEEE---EEE-c----CCCCEEEEeeCCCeEEEEECCcccEEEeeecCCC--C-----eEEEEEc-----CCCCEEEE
Q 022910 149 GGGVEW---VSW-H----PRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS--S-----VTCGDFT-----PDGKTICT 208 (290)
Q Consensus 149 ~~~i~~---i~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~-----i~~~~~~-----~~~~~l~~ 208 (290)
..++.. ... . ..+..+++|+.+|.+...|+++++.+..+..... . ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222321 000 0 1456889999999999999999999988864321 0 1111111 12456778
Q ss_pred EeCCCeEEEEcCCCCeeeEEEe-----CCCCcccCe-EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 022910 209 GSDDATLRVWNPKSGENIHVIR-----GHPYHTEGL-TCLTISADSTLALSGSKDGSVHMVNITTGKVVS 272 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 272 (290)
+..+..+.+.+ ++++ ...+. ... ....+ .+-..+.++.+ ++++.||.|..+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~-~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNV-LDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCT-TTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccc-cccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 87777787777 4553 21111 000 00000 00001224566 457889999999999998876
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.84 E-value=0.0021 Score=51.49 Aligned_cols=184 Identities=11% Similarity=0.160 Sum_probs=100.1
Q ss_pred CcEEEEecC--CCcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC----CcEEEEcCCCCceEEEEecC
Q 022910 77 ATLVATGGG--DDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD----GLVQIWDPSSGNLKCTLEGP 148 (290)
Q Consensus 77 ~~~l~~~~~--dg~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~ 148 (290)
+.+++.|+. ...+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+||+.+.+....-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 456666765 35788999888765432 2211122222333 56677777654 67889999887644332211
Q ss_pred C--CCEEEEEEcCCCCEEEEeeCC------CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeC-------
Q 022910 149 G--GGVEWVSWHPRGHIVLAGSED------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD------- 211 (290)
Q Consensus 149 ~--~~i~~i~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~------- 211 (290)
. .....+.+ ++.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++++++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc
Confidence 1 11222222 67777787765 4589999987754332 2111122222223 5566666653
Q ss_pred --CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 212 --DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 212 --dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
-..+.+||+.+.+= ..+...+.....-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 166 ~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 166 RVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred cccceEEEeCCCCCeE-EECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 34588999987642 333322212222223333 56777777653 368899987653
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.82 E-value=0.005 Score=51.20 Aligned_cols=131 Identities=15% Similarity=0.201 Sum_probs=90.7
Q ss_pred CcEEEEEccCCeeeeeeccc----cCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc------------eEEEEec---
Q 022910 87 DKGFFWRINQGDWASEIQGH----KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN------------LKCTLEG--- 147 (290)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~--- 147 (290)
+.||.-++.....-+.+... -..|..+..+|+|++||..+ +..|.|..+..+. ....+..
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 67887787744333333321 23578899999999999987 4679998887332 1123332
Q ss_pred ---CCCCEEEEEEcCC---CCEEEEeeCCCeEEEEECCccc--EEEeee---------cCCCCeEEEEEcCCCCEEEEEe
Q 022910 148 ---PGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAA--YLNMFS---------GHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 148 ---~~~~i~~i~~~~~---~~~l~~~~~dg~i~i~d~~~~~--~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
...+|..+.|||- +..|++-..|+.|++||+.... +. .+. .....|.+++|.+++-.|++.+
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 2467999999994 5689999999999999998631 11 221 1225788999999888888765
Q ss_pred --CCCeEEEEc
Q 022910 211 --DDATLRVWN 219 (290)
Q Consensus 211 --~dg~i~i~d 219 (290)
..|.|+-..
T Consensus 199 ~t~~GDIYAlc 209 (452)
T 3pbp_A 199 TTEGGDIFAFY 209 (452)
T ss_dssp CTTSCEEEEES
T ss_pred cCCCCCEEEEC
Confidence 789887653
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.74 E-value=0.0057 Score=49.16 Aligned_cols=185 Identities=13% Similarity=0.140 Sum_probs=97.8
Q ss_pred CCcEEEEecC-----C------CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC--------CcEEEE
Q 022910 76 DATLVATGGG-----D------DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD--------GLVQIW 134 (290)
Q Consensus 76 ~~~~l~~~~~-----d------g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~ 134 (290)
++.+++.|+. . ..+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEE
Confidence 5567777763 1 1277888887664332 2111111122222 56666666632 458899
Q ss_pred cCCCCceEEEEecCC--CCEEEEEEcCCCCEEEEeeC------CCeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCC
Q 022910 135 DPSSGNLKCTLEGPG--GGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 135 d~~~~~~~~~~~~~~--~~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~ 204 (290)
|+.+.+-...-..+. ....++. .++++++.|+. -..+.+||+.+.+-... +........++.+ +++
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 198 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGR 198 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE
T ss_pred CCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCE
Confidence 998775432211111 1122222 35677777776 24689999987653322 2111112223333 567
Q ss_pred EEEEEeCCC-----eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC--------------CcEEEEEc
Q 022910 205 TICTGSDDA-----TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--------------GSVHMVNI 265 (290)
Q Consensus 205 ~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~~wd~ 265 (290)
+++.|+.++ .+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..|.+||+
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDNKW-APFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNE 275 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred EEEEeccCCCCccceEEEEECCCCeE-EECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecC
Confidence 777777654 588999987642 333322212222233333 56777777763 24778998
Q ss_pred CCCc
Q 022910 266 TTGK 269 (290)
Q Consensus 266 ~~~~ 269 (290)
.+.+
T Consensus 276 ~~~~ 279 (315)
T 4asc_A 276 EEKK 279 (315)
T ss_dssp TTTE
T ss_pred CCCh
Confidence 7764
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.73 E-value=0.0061 Score=45.95 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=85.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceE------EEEe--cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECC
Q 022910 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK------CTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (290)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~ 179 (290)
..+..++|+|++.+.++ .+|.|+-.+..+.... ..+- +-. ...++.|.|++.+.++ .||.|+-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999998886666 6788877776553211 1111 111 1478999999988887 55999888753
Q ss_pred cccE-------EEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCe------eeEEEeCCCCcccCeEEEEEcC
Q 022910 180 RAAY-------LNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE------NIHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 180 ~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~v~~~~~~~ 246 (290)
+... ...-...=..+..|.+.|+|.+.++. ++.++-....++. ....+... .-...+.+.|.+
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~--g~~~yr~l~f~~ 191 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQG--GWDTFKFLFFSS 191 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESS--SGGGEEEEEECT
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccC--CcceEEEEEECC
Confidence 3211 01111112467999999999877776 7876544333221 11222211 222345577888
Q ss_pred CCCEEEEEeCCCcEE
Q 022910 247 DSTLALSGSKDGSVH 261 (290)
Q Consensus 247 ~~~~l~~~~~dg~i~ 261 (290)
++.++++. +|.|+
T Consensus 192 ~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 192 VGTLFGVQ--GGKFY 204 (236)
T ss_dssp TSCEEEEE--TTEEE
T ss_pred CCcEEEEe--CCeEE
Confidence 88877766 66544
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.66 E-value=0.0042 Score=49.57 Aligned_cols=184 Identities=19% Similarity=0.288 Sum_probs=97.2
Q ss_pred CcEEEEecCC----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCceEEEE
Q 022910 77 ATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 77 ~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~ 145 (290)
+.+++.|+.+ ..+.+||+.+.+.... +......-..+.+ ++..++.|+.+ ..+.+||..+.+....-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3566666643 3588899887664332 2211111122223 56677777654 35888998877543322
Q ss_pred ecCC--CCEEEEEEcCCCCEEEEeeCCC-----eEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeCC----
Q 022910 146 EGPG--GGVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD---- 212 (290)
Q Consensus 146 ~~~~--~~i~~i~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d---- 212 (290)
.... .....+.+ ++.+++.|+.++ .+.+||+.+.+-... +........++.+ ++++++.|+.+
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTT
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCC
Confidence 1111 11222222 567777777553 578899887653332 2211122222223 45666666532
Q ss_pred ---CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 213 ---ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 213 ---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 170 ~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 170 QCLSTVECYNATTNEW-TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ccccEEEEEeCCCCcE-EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 3588999987642 222222212222223333 57777777764 368899987654
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.63 E-value=0.0028 Score=60.43 Aligned_cols=200 Identities=13% Similarity=0.138 Sum_probs=121.1
Q ss_pred EEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceEEEEecC
Q 022910 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP 148 (290)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~ 148 (290)
.-.+| ..+++|.-. ..++.||++.+...+..+. ...+|.--.|-... .|+..+ +..|+-|++.. ..+...+..|
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hccCC-CcceEEEec-CCeEEEeehHHhhhhcccc-cCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 34677 556666543 6899999999877777666 34567777886443 344444 45799999964 2344444333
Q ss_pred ----CCCEEEEEEcCCCCEEEEee-------CCCeEEEEECCcccEEEeeecCCCCeEEEEEc--CCC-CEEEEEe---C
Q 022910 149 ----GGGVEWVSWHPRGHIVLAGS-------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT--PDG-KTICTGS---D 211 (290)
Q Consensus 149 ----~~~i~~i~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~-~~l~~~~---~ 211 (290)
...|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+|......+.+. +.. ..++.+. .
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34566677788888877644 34789999887543 33444454433333321 111 2222221 1
Q ss_pred CCeEEEEcCCCC---eeeE------EEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 212 DATLRVWNPKSG---ENIH------VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 212 dg~i~i~d~~~~---~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
.+.++|.++... .+.. .+........-..++..++.-..++.-+.-|.|++||+.++.++..-.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 368888887543 1111 111111123345677888877788888999999999999998765443
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.62 E-value=0.0028 Score=50.84 Aligned_cols=185 Identities=15% Similarity=0.181 Sum_probs=99.8
Q ss_pred CCcEEEEecC----C-----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC-----CcEEEEcCCCC
Q 022910 76 DATLVATGGG----D-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSG 139 (290)
Q Consensus 76 ~~~~l~~~~~----d-----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 139 (290)
++.+++.|+. + ..+.+||+.+.+.... +.........+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4567777765 2 4588899887654432 2211122222333 56666666543 46888998877
Q ss_pred ceEEEEecC--CCCEEEEEEcCCCCEEEEeeCC-----CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEe
Q 022910 140 NLKCTLEGP--GGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 140 ~~~~~~~~~--~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~ 210 (290)
+....-... .....++.+ ++.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 543321111 111222233 66777777754 4589999887653322 1111222233333 566677776
Q ss_pred CC-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
.+ ..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..|.+||+.+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETW-TFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCcE-EECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 54 4689999987642 223222212222223333 57777777754 468899987654
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.58 E-value=0.022 Score=46.65 Aligned_cols=152 Identities=14% Similarity=0.086 Sum_probs=91.5
Q ss_pred EEEEEECCCCCEEEEE------------eCCCcEEEEcCCCC--ceEE-EEec-----CCCCEEEEEEcC--CCC-EEEE
Q 022910 110 VSSLAFSMDGQLLASG------------GLDGLVQIWDPSSG--NLKC-TLEG-----PGGGVEWVSWHP--RGH-IVLA 166 (290)
Q Consensus 110 i~~~~~~~~~~~l~~~------------~~dg~i~i~d~~~~--~~~~-~~~~-----~~~~i~~i~~~~--~~~-~l~~ 166 (290)
.-.+...|+|..++++ ..+|.|.++|+.+. +... .+.+ .......+.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4566677776544444 16899999998742 3211 1222 123567777765 343 4444
Q ss_pred eeC---CCeEEEEECCcc----cEEEeeecC-CCCeEEEEEcCCCCEEEEEe-----------------CCCeEEEEcCC
Q 022910 167 GSE---DSTVWMWNADRA----AYLNMFSGH-GSSVTCGDFTPDGKTICTGS-----------------DDATLRVWNPK 221 (290)
Q Consensus 167 ~~~---dg~i~i~d~~~~----~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~ 221 (290)
+.. ...|.+|++... ..+..+.+. -.....+.+.++|.++++.. ..|.|+.|+..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 432 457778776543 223333322 23578899999998777654 13567777663
Q ss_pred CCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCC
Q 022910 222 SGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITT 267 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~ 267 (290)
+. ..+.. .-...+.++|+||++.|+++. ..+.|+.|++..
T Consensus 212 --~~-~~~~~---~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 212 --DV-RVVAE---GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp --CC-EEEEE---EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred --eE-EEeec---CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 22 22221 345678999999998777664 567999999863
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.57 E-value=0.0036 Score=50.21 Aligned_cols=185 Identities=17% Similarity=0.236 Sum_probs=98.6
Q ss_pred CCcEEEEecCC----CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeC----C-----CcEEEEcCCCCc
Q 022910 76 DATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGL----D-----GLVQIWDPSSGN 140 (290)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~----d-----g~i~i~d~~~~~ 140 (290)
++.+++.|+.. ..+.+||..+.+.... +.........+.+ ++..++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45677777632 3688999887765432 2211111122222 5666666664 2 468889988775
Q ss_pred eEEEEe--cCCCCEEEEEEcCCCCEEEEeeCC-----CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeC
Q 022910 141 LKCTLE--GPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD 211 (290)
Q Consensus 141 ~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~ 211 (290)
....-. ........+.+ ++++++.|+.+ ..+.+||+.+.+-... +......-.++.+ ++.+++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 433211 11111222222 66777777643 3588999887653322 2211122223333 5666667665
Q ss_pred C-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 212 d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
+ ..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 178 ~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 4 4588999876542 222222212222233333 67777777664 468999987654
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.56 E-value=0.0095 Score=47.92 Aligned_cols=185 Identities=15% Similarity=0.255 Sum_probs=96.8
Q ss_pred CCcEEEEecC----CC-------cEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCC-------CcEEEEc
Q 022910 76 DATLVATGGG----DD-------KGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-------GLVQIWD 135 (290)
Q Consensus 76 ~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~i~d 135 (290)
++.+++.|+. ++ .+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEe
Confidence 5667777773 12 177888877665432 2222222222333 56667777653 3578889
Q ss_pred CCCCceEEEEecCCC--CEEEEEEcCCCCEEEEeeC------CCeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCE
Q 022910 136 PSSGNLKCTLEGPGG--GVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~ 205 (290)
+.+.+....-..... ...++. .++.+++.|+. -..+.+||+.+.+-... +........++.+ ++++
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 209 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKI 209 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEE
T ss_pred CCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEE
Confidence 887754432211111 111222 36677777764 23589999987753332 2211122223333 5667
Q ss_pred EEEEeCC-----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC--------------CcEEEEEcC
Q 022910 206 ICTGSDD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--------------GSVHMVNIT 266 (290)
Q Consensus 206 l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~~wd~~ 266 (290)
++.|+.+ ..+.+||+.+.+ ...+...+........+.+ ++++++.|+.+ ..+.+||+.
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCC-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEEcCcCCCCccceEEEEECCCCe-EEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 7777643 357789987654 2223222212222222333 56777777653 358899988
Q ss_pred CCc
Q 022910 267 TGK 269 (290)
Q Consensus 267 ~~~ 269 (290)
+.+
T Consensus 287 ~~~ 289 (318)
T 2woz_A 287 KKE 289 (318)
T ss_dssp TTE
T ss_pred CCE
Confidence 765
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.55 E-value=0.024 Score=46.42 Aligned_cols=187 Identities=16% Similarity=0.122 Sum_probs=98.9
Q ss_pred CcCEEEEEECCC---CCcEEEEecCC-----CcEEEEEccCCe-----ee-eeec---cccCCEEEEEECCCCCEEEEEe
Q 022910 64 SDEVYSVACSPT---DATLVATGGGD-----DKGFFWRINQGD-----WA-SEIQ---GHKDSVSSLAFSMDGQLLASGG 126 (290)
Q Consensus 64 ~~~v~~~~~~~~---~~~~l~~~~~d-----g~i~iw~~~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~l~~~~ 126 (290)
......|+|+|+ ++.++++-... +.|..|+..... .+ ..+. ........++|.|+|.++++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 356789999994 35555554432 567778776431 11 1132 1112236899999997655543
Q ss_pred C-------------CCcEEEEcCCCC------------ceEEEEecCCCCEEEEEEcC-CCCEEEEeeCCCeE------E
Q 022910 127 L-------------DGLVQIWDPSSG------------NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTV------W 174 (290)
Q Consensus 127 ~-------------dg~i~i~d~~~~------------~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i------~ 174 (290)
. .|.|.-++.... .....+.........++|+| ++.++++-.....+ .
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 2 245666665430 01111221122366789999 56655543322221 1
Q ss_pred EEECCccc------------------EEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee------eEEEe
Q 022910 175 MWNADRAA------------------YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN------IHVIR 230 (290)
Q Consensus 175 i~d~~~~~------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~ 230 (290)
+.-+..+. ++..+. +......++| .++.++++....+.|...++..... ...+.
T Consensus 234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~ 311 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL 311 (352)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec
Confidence 22222221 122221 2234567777 4666666666677888877654321 11221
Q ss_pred CCCCcccCeEEEEEcCCCCEEEEEe
Q 022910 231 GHPYHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 231 ~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
. ....+..+++.|+|.++++..
T Consensus 312 ~---~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 312 S---GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp E---SSCCEEEEEECTTSCEEEEEC
T ss_pred c---cCCCeeEEEECCCCcEEEEEe
Confidence 1 235688999999998777654
No 324
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.54 E-value=0.01 Score=50.96 Aligned_cols=87 Identities=17% Similarity=0.092 Sum_probs=59.0
Q ss_pred CCeEEEEEcCCCCEEEEEeC-CCeEEEEcCCCCee---------eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEE
Q 022910 192 SSVTCGDFTPDGKTICTGSD-DATLRVWNPKSGEN---------IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVH 261 (290)
Q Consensus 192 ~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 261 (290)
.....+.++|+|+++++++. +.++.++|+..... ...+.......-.....+|.++|....+---|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 34466889999999987654 77899999874211 001111111345677889999996666667899999
Q ss_pred EEEcCCC----------cEEEEEccCC
Q 022910 262 MVNITTG----------KVVSSLVSHT 278 (290)
Q Consensus 262 ~wd~~~~----------~~~~~~~~~~ 278 (290)
-|++... ..+.++..|-
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred EEeccHHHHHhcCccCCeeeecccccc
Confidence 9998754 4666676554
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.50 E-value=0.0042 Score=46.79 Aligned_cols=142 Identities=14% Similarity=0.121 Sum_probs=82.5
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCC--------EEEEEECCCCCEEEEEeCCCcEEEEcC
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS--------VSSLAFSMDGQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (290)
..+..++|+| ++.+.++ .+|.+.-.+..+.....-+. .... -.++.|.|+|.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 4777999999 7777776 56776555544322111111 1112 368899999987777 4699988876
Q ss_pred CCCceE------EEE-ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc------EEEeee-cCCCCeEEEEEcCC
Q 022910 137 SSGNLK------CTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA------YLNMFS-GHGSSVTCGDFTPD 202 (290)
Q Consensus 137 ~~~~~~------~~~-~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~-~~~~~i~~~~~~~~ 202 (290)
.+.... ..+ ...=..+..|.+.|+|.+.++. ++.++-....+.. ....+. ..-...+-+.|.|+
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 442211 111 1111358999999999888777 7776543322111 011111 12223445668888
Q ss_pred CCEEEEEeCCCeEE
Q 022910 203 GKTICTGSDDATLR 216 (290)
Q Consensus 203 ~~~l~~~~~dg~i~ 216 (290)
+.++++. +|.++
T Consensus 193 G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 193 GTLFGVQ--GGKFY 204 (236)
T ss_dssp SCEEEEE--TTEEE
T ss_pred CcEEEEe--CCeEE
Confidence 8777666 67544
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.50 E-value=0.028 Score=45.80 Aligned_cols=229 Identities=9% Similarity=0.094 Sum_probs=127.1
Q ss_pred ceeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeee--eee----ccccCCEEEEEECCC---CCEEEEE-
Q 022910 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEI----QGHKDSVSSLAFSMD---GQLLASG- 125 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~----~~~~~~i~~~~~~~~---~~~l~~~- 125 (290)
.+..+...-..-..|+|.| ++.++++-...|.|++++...++.. ..+ .........|+|+|+ +.+|++.
T Consensus 23 ~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 3444545556778999999 6777777665899999986555432 112 123456899999995 4444443
Q ss_pred --eCCCcEEEEcCCCC--------ceEE---EEec-CCCCEEEEEEcCCCCEEEEeeC-------------CCeEEEEEC
Q 022910 126 --GLDGLVQIWDPSSG--------NLKC---TLEG-PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNA 178 (290)
Q Consensus 126 --~~dg~i~i~d~~~~--------~~~~---~~~~-~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~ 178 (290)
..++.|.-|.+..+ .... .+.. .......|.|.|+|.++++.+. .|.|.-++.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 23455666655431 1111 1221 1123467999999987777542 355555555
Q ss_pred Cccc-------EEEeee-cCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEcCCCCe------------------eeEEEeC
Q 022910 179 DRAA-------YLNMFS-GHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGE------------------NIHVIRG 231 (290)
Q Consensus 179 ~~~~-------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------------~~~~~~~ 231 (290)
...- ....+. ++ .....++|+|++.++++=. .++.=.|.-+..+. ++..+..
T Consensus 182 dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~ 260 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST 260 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT
T ss_pred CCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC
Confidence 4320 011222 33 3456899999877665532 22211221111111 1111111
Q ss_pred CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE----EEEEccCCCcEEEEEEecCC
Q 022910 232 HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV----VSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 232 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~~v~~i~~s~d~ 290 (290)
+......++|. ++.+++..-..+.|....+..... ...+.+..+.++.|+..|||
T Consensus 261 ---~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG 319 (347)
T 3das_A 261 ---DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD 319 (347)
T ss_dssp ---TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred ---CCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence 11355677776 466666666667787777765432 23344445789999999987
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.49 E-value=0.017 Score=46.28 Aligned_cols=183 Identities=11% Similarity=0.080 Sum_probs=97.5
Q ss_pred cEEEEecCCCcEEEEEccCCeeee-eeccccCCEEEEEECCCCCEEEEEeC-----C------CcEEEEcCCCCceEEEE
Q 022910 78 TLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGL-----D------GLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~-----d------g~i~i~d~~~~~~~~~~ 145 (290)
.+++.|+ ..+.+||..+.+... .+..............++..++.|+. . ..+.+||..+.+....-
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 3555666 679999999887643 12212122233334457777777773 1 12778888877643221
Q ss_pred ecCCC--CEEEEEEcCCCCEEEEeeCC--------CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeC-C
Q 022910 146 EGPGG--GVEWVSWHPRGHIVLAGSED--------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD-D 212 (290)
Q Consensus 146 ~~~~~--~i~~i~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~-d 212 (290)
..... ....+.+ ++.+++.|+.+ ..+.+||+.+.+-... +........++. -++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 159 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGS 159 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCC
Confidence 11111 1112222 56677777732 4589999987653322 211112222222 25566667765 2
Q ss_pred -----CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCc
Q 022910 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGK 269 (290)
Q Consensus 213 -----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~ 269 (290)
..+.+||+.+.+= ..+...+........+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 160 ~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 4689999887542 222222111222223333 667888887654 58889987653
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.44 E-value=0.026 Score=46.02 Aligned_cols=143 Identities=11% Similarity=0.118 Sum_probs=83.6
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccE--EEee----ecCCCCeEEEEEcCC---CCEEEEE-e--C
Q 022910 144 TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY--LNMF----SGHGSSVTCGDFTPD---GKTICTG-S--D 211 (290)
Q Consensus 144 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~----~~~~~~i~~~~~~~~---~~~l~~~-~--~ 211 (290)
.+...-...+.|+|.|++.++++--..|.|++++...++. +..+ .........|+++|+ ..+|++. + .
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 4444445688999999999777766589999998765543 2212 123456889999995 4455543 2 3
Q ss_pred CCeEEEEcCCCC----------eee-EEEeCCCCcccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcCC
Q 022910 212 DATLRVWNPKSG----------ENI-HVIRGHPYHTEGLTCLTISADSTLALSGSK-------------DGSVHMVNITT 267 (290)
Q Consensus 212 dg~i~i~d~~~~----------~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~wd~~~ 267 (290)
+..|.-|.+..+ +.+ ..+... .......|.|.|+|.++++.+. -|.|.-++...
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~--~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKG--VIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCC--SSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCC--CCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 456666655431 111 112221 1223567999999987776542 35666666542
Q ss_pred C---------cEEEEEccCCCcEEEEEEecCC
Q 022910 268 G---------KVVSSLVSHTDSIECIGFSRSE 290 (290)
Q Consensus 268 ~---------~~~~~~~~~~~~v~~i~~s~d~ 290 (290)
. ..+.. .+|. ....++|+|+|
T Consensus 184 ~ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G 213 (347)
T 3das_A 184 EPAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQ 213 (347)
T ss_dssp SBCTTCSSTTCCEEE-BCCS-BCCEEEECTTC
T ss_pred CccCCCCCCCCeEEe-eCCC-CcceEEECCCC
Confidence 1 11221 2443 45678888864
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.39 E-value=0.031 Score=53.19 Aligned_cols=187 Identities=12% Similarity=0.143 Sum_probs=108.9
Q ss_pred ECCCCCcEEEEec----------CCCcEEEEEccCCeeeeeec-cccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCc
Q 022910 72 CSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (290)
Q Consensus 72 ~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (290)
|......+|++|+ ..|.|++|++..++.....+ ...++|++++-. +| +|++|- ...|++|++...+
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTS
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCc
Confidence 4332346777775 45889999997554332222 346788888754 45 444443 4789999998765
Q ss_pred eEE-EEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEE--CCcccEEEee-ecCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 022910 141 LKC-TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN--ADRAAYLNMF-SGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (290)
Q Consensus 141 ~~~-~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d--~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 216 (290)
.+. ...... .+..+.....++++++|..-..|.++. ....+....- ......++++.+-.+ ..++.+..+|.|.
T Consensus 916 ~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 916 ELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLF 993 (1158)
T ss_dssp CEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEE
T ss_pred eEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEE
Confidence 444 111121 233223333578899998877766654 3333332222 225567888888754 4778899999999
Q ss_pred EEcCCCC-------eeeEEEeCCCCcccCeEEEE---EcCC---------CCEEEEEeCCCcEEEEE
Q 022910 217 VWNPKSG-------ENIHVIRGHPYHTEGLTCLT---ISAD---------STLALSGSKDGSVHMVN 264 (290)
Q Consensus 217 i~d~~~~-------~~~~~~~~~~~~~~~v~~~~---~~~~---------~~~l~~~~~dg~i~~wd 264 (290)
++..... +.+....... ....|+++. +.+. ...++.++.+|.|.+.-
T Consensus 994 vl~~~~~~~~~~~~~~L~~~~~fh-lG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 994 VCQKDSAATTDEERQHLQEVGLFH-LGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEEECTTCCSTTGGGBEEEEEEEE-CSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred EEecCCCCCCccccceeeeEEEEe-CCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence 8865431 2222222111 345567765 2232 23467777888887653
No 330
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.38 E-value=0.0042 Score=50.89 Aligned_cols=192 Identities=14% Similarity=0.162 Sum_probs=96.6
Q ss_pred CCcEEEEecC-C---------CcEEEEEccCCeeeeee--c-cccCCEEEEEECCCCCEEEEEeCC--------------
Q 022910 76 DATLVATGGG-D---------DKGFFWRINQGDWASEI--Q-GHKDSVSSLAFSMDGQLLASGGLD-------------- 128 (290)
Q Consensus 76 ~~~~l~~~~~-d---------g~i~iw~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~l~~~~~d-------------- 128 (290)
++.+++.|+. + ..+.+||+.+.+....- . .......++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 4567777765 2 46889998887654332 2 1112222233 367777777754
Q ss_pred -------------------------CcEEEEcCCCCceEEEEecCCC-CE-EEEEEcCCCCEEEEeeC------CCeEEE
Q 022910 129 -------------------------GLVQIWDPSSGNLKCTLEGPGG-GV-EWVSWHPRGHIVLAGSE------DSTVWM 175 (290)
Q Consensus 129 -------------------------g~i~i~d~~~~~~~~~~~~~~~-~i-~~i~~~~~~~~l~~~~~------dg~i~i 175 (290)
..+.+||+.+.+....-..... .. .+++.. ++.+++.|+. ...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEE
Confidence 5788999988765433222211 11 222222 5667777764 345777
Q ss_pred EEC--CcccEEE--eeecCCC--CeEEEEEcCCCCEEEEEeCC----------------------CeEEEEcCCCCeeeE
Q 022910 176 WNA--DRAAYLN--MFSGHGS--SVTCGDFTPDGKTICTGSDD----------------------ATLRVWNPKSGENIH 227 (290)
Q Consensus 176 ~d~--~~~~~~~--~~~~~~~--~i~~~~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~~~~ 227 (290)
|++ .+.+-.. .+..... ...++.+ ++.+++.|+.+ ..+.+||+.+.+= .
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W-~ 298 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW-D 298 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C-E
T ss_pred EEecCCCCcEEecCCCCCCcccccceEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce-e
Confidence 887 4433222 2211111 1112222 56666676532 2477899876532 2
Q ss_pred EEeCCCCcccCeEEEEEcCCCCEEEEEeCCC------cEEEEEcCCCcEEEEEc
Q 022910 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDG------SVHMVNITTGKVVSSLV 275 (290)
Q Consensus 228 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~~wd~~~~~~~~~~~ 275 (290)
.+...+.....-.++.+ ++++++.|+.++ .|.++++.+++.+....
T Consensus 299 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 299 KSGELSQGRAYGVSLPW--NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEECSSCCBSSEEEEE--TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eCCCCCCCcccceeEEe--CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 22221112222223333 678888888643 46667888887666544
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.38 E-value=0.052 Score=46.15 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=62.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE--EEec------CCCCEEEEEEcCC---CCEEEEeeC-------
Q 022910 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC--TLEG------PGGGVEWVSWHPR---GHIVLAGSE------- 169 (290)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~------~~~~i~~i~~~~~---~~~l~~~~~------- 169 (290)
.....|+|.|+|+++++-...+.|++++..+++... .+.. ..+.+..|+|+|+ +..|+++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 356799999999977765544579888866554332 2221 2345789999995 555555442
Q ss_pred ------CCeEEEEECCcc-------cEEE-eeec-CCCCeEEEEEcCCCCEEEEEe
Q 022910 170 ------DSTVWMWNADRA-------AYLN-MFSG-HGSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 170 ------dg~i~i~d~~~~-------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~ 210 (290)
...|..|++... +.+. .+.. .......|+|.|+|.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666655321 1111 1221 123478999999998777654
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.37 E-value=0.012 Score=52.91 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=105.8
Q ss_pred CCcEEEEecCC----CcEEEEEccCCeeeeee--------ccccCCEEEEEECCCCCEEEEEeCC------CcEEEEcCC
Q 022910 76 DATLVATGGGD----DKGFFWRINQGDWASEI--------QGHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDPS 137 (290)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~ 137 (290)
++.+++.|+.+ ..+.+||..+++....- .........+.+..+++.++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 55677777753 46888998877654332 1111122233332266777777643 357889988
Q ss_pred CCceEEEEecCCC-CEEEEEEcCCCCEEEEeeCCC--eEEEEECCcccEEEee-----ecCCCCeEEEEEcCC-CCEEEE
Q 022910 138 SGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGSEDS--TVWMWNADRAAYLNMF-----SGHGSSVTCGDFTPD-GKTICT 208 (290)
Q Consensus 138 ~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~-~~~l~~ 208 (290)
+.+....-..... .-.+++...++.+++.|+.++ .+.+||+.+.+-...- ........++.+... +.+++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 7654332111111 112233323788888888655 6999999887543322 112222233555554 566667
Q ss_pred EeC--C-----CeEEEEcCCCCee-----eEEEeCCC-CcccCeEEEEEcCCCCEEEEEeC--------CCcEEEEEcCC
Q 022910 209 GSD--D-----ATLRVWNPKSGEN-----IHVIRGHP-YHTEGLTCLTISADSTLALSGSK--------DGSVHMVNITT 267 (290)
Q Consensus 209 ~~~--d-----g~i~i~d~~~~~~-----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~~wd~~~ 267 (290)
|+. + ..+.+||+.+..- ...+...+ ........+.+ .++++++.|+. ...|.+||+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 765 2 4688999987761 22222111 11122223333 33777777774 34699999887
Q ss_pred CcE
Q 022910 268 GKV 270 (290)
Q Consensus 268 ~~~ 270 (290)
.+-
T Consensus 636 ~~W 638 (695)
T 2zwa_A 636 ETL 638 (695)
T ss_dssp TEE
T ss_pred CeE
Confidence 653
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.28 E-value=0.011 Score=48.49 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=66.6
Q ss_pred CCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEE---Eee----ecCCCCeEEEEEcCC---CCEEEEEe-C-------
Q 022910 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL---NMF----SGHGSSVTCGDFTPD---GKTICTGS-D------- 211 (290)
Q Consensus 150 ~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~----~~~~~~i~~~~~~~~---~~~l~~~~-~------- 211 (290)
.....|+|.|+++.|+++...|.|++++.. +... ..+ .........|+++|+ +..|+++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 357899999999834455567999999854 3221 111 112345789999995 45555443 2
Q ss_pred CCeEEEEcCCCC--e--eeE-EEeCCCC---cccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcC
Q 022910 212 DATLRVWNPKSG--E--NIH-VIRGHPY---HTEGLTCLTISADSTLALSGSK-------------DGSVHMVNIT 266 (290)
Q Consensus 212 dg~i~i~d~~~~--~--~~~-~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~wd~~ 266 (290)
...|..|++... . ... .+...+. .......|+|.|+|.++++.+. .|.|..++..
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 235666666433 1 112 2222211 1122457999999976665443 2467777764
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.28 E-value=0.1 Score=47.41 Aligned_cols=213 Identities=11% Similarity=0.088 Sum_probs=119.1
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeee-ccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (290)
...|.+|.-.. .+.+. .|+.+| +..||-.+.+..... ......|.++....++ .|..++.+| +..||..+.+..
T Consensus 21 ~n~V~~I~qD~-~G~lW-igT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDS-EGLIW-IGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECT-TSCEE-EEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECC-CCCEE-EEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence 56799998887 44433 455666 556664321111111 1123568888777665 566666665 789998776432
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeee----cCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 022910 143 CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS----GHGSSVTCGDFTPDGKTICTGSDDATLRVW 218 (290)
Q Consensus 143 ~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 218 (290)
.........|.++... ++ .|..++.+ -|..|+..+.+...... .....|.++...+++.+.+ ++.. -|..|
T Consensus 96 ~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~ 170 (758)
T 3ott_A 96 QPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRY 170 (758)
T ss_dssp CCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEE
T ss_pred CcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhC
Confidence 2111122347776543 44 55566665 68889987665432201 1235688888887777555 4544 47788
Q ss_pred cCCCCeeeEEEeCCC---CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEec
Q 022910 219 NPKSGENIHVIRGHP---YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR 288 (290)
Q Consensus 219 d~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s~ 288 (290)
+..+++.. .+.... .....|.++...+++..|..|+. +-+..++..+++...........|.++...+
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 241 (758)
T 3ott_A 171 IPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG 241 (758)
T ss_dssp ETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECT
T ss_pred ccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC
Confidence 88766532 222111 01234888888777765555654 4588899876653221111123455555443
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.20 E-value=0.049 Score=43.68 Aligned_cols=183 Identities=13% Similarity=0.149 Sum_probs=93.9
Q ss_pred cEEEEecCCCcEEEEEccCCeeeee-eccccCCEEEEEECCCCCEEEEEeC----CC-------cEEEEcCCCCceEEEE
Q 022910 78 TLVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGL----DG-------LVQIWDPSSGNLKCTL 145 (290)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~~ 145 (290)
.+++.|+. .+.+||..+.+.... +..............++..++.|+. ++ .+.+||..+.+....-
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34555553 488999988775542 1111122222333457777777773 11 1778888776543321
Q ss_pred ecC--CCCEEEEEEcCCCCEEEEeeCC-------CeEEEEECCcccEEEe--eecCCCCeEEEEEcCCCCEEEEEeC---
Q 022910 146 EGP--GGGVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD--- 211 (290)
Q Consensus 146 ~~~--~~~i~~i~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~--- 211 (290)
... ......+.+ ++.+++.|+.+ ..+.+||+.+.+-... +......-.++. .++.+++.|+.
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDD 170 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESS
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCC
Confidence 111 111222222 56777777753 2588899887654332 111111112222 25666666653
Q ss_pred ---CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCc
Q 022910 212 ---DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (290)
Q Consensus 212 ---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 269 (290)
-..+.+||+.+.+= ..+...+........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 171 ~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp SCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 23589999987642 233222211222223333 56777777653 357788887654
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.18 E-value=0.13 Score=46.71 Aligned_cols=192 Identities=11% Similarity=0.182 Sum_probs=115.5
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (290)
...|.++.... ++. |..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ -|..++..+++..
T Consensus 62 ~~~i~~i~~d~-~g~-lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~- 134 (758)
T 3ott_A 62 NTRIYCGVIID-NTY-LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT- 134 (758)
T ss_dssp SSCEEEEEEET-TTE-EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-
T ss_pred CceEEEEEEcC-CCc-EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-
Confidence 35688887766 444 44555555 788998876543321112335777654 344 56666655 5888888776543
Q ss_pred EEe-----cCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeec-----CCCCeEEEEEcCCCCEEEEEeCCC
Q 022910 144 TLE-----GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG-----HGSSVTCGDFTPDGKTICTGSDDA 213 (290)
Q Consensus 144 ~~~-----~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg 213 (290)
.+. .....|.++....++.+.+ |+.. -|..++..+.+....... ....|.++...+++..|.+|+. +
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~ 211 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-G 211 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-E
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-C
Confidence 231 1234688888887777555 4444 477888776653221111 1234888888777776666664 4
Q ss_pred eEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 022910 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
-|..|+..+++... +... ....|.++...++|.+.+ |+. +-+.+++..+++.
T Consensus 212 Gl~~~~~~~~~~~~-~~~l--~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 212 YLFQYFPSTGQIKQ-TEAF--HNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp EEEEEETTTTEEEE-EEEE--EEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCC
T ss_pred CCeEEcCCCCeEEe-ccCC--CCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcE
Confidence 58889987765322 2211 234588888888777665 444 4578888766543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.15 E-value=0.095 Score=44.53 Aligned_cols=111 Identities=11% Similarity=0.108 Sum_probs=64.1
Q ss_pred eeeeccCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeee--eeecc------ccCCEEEEEECCC---CCEEEEE
Q 022910 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEIQG------HKDSVSSLAFSMD---GQLLASG 125 (290)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~------~~~~i~~~~~~~~---~~~l~~~ 125 (290)
+..+...-....+|+|.| ++.++++-...+.|++++...++.. ..+.. ....+..|+|+|+ +.+|+++
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 333433344667999999 6777766554457888876544432 22221 2456789999995 5555554
Q ss_pred eC-------------CCcEEEEcCCCC--c-----eEE-EEec-CCCCEEEEEEcCCCCEEEEee
Q 022910 126 GL-------------DGLVQIWDPSSG--N-----LKC-TLEG-PGGGVEWVSWHPRGHIVLAGS 168 (290)
Q Consensus 126 ~~-------------dg~i~i~d~~~~--~-----~~~-~~~~-~~~~i~~i~~~~~~~~l~~~~ 168 (290)
.. ...|.-|++... + .+. .+.. .......|+|.|+|.++++.+
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 32 134555554322 1 111 1221 123478899999998777644
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.90 E-value=0.13 Score=42.03 Aligned_cols=190 Identities=14% Similarity=0.075 Sum_probs=101.9
Q ss_pred CcCEEEEEECCC---CCcEEEEecC---C----CcEEEEEccCC-------eee-eeecc-ccCCEEEEEECCCCCEEEE
Q 022910 64 SDEVYSVACSPT---DATLVATGGG---D----DKGFFWRINQG-------DWA-SEIQG-HKDSVSSLAFSMDGQLLAS 124 (290)
Q Consensus 64 ~~~v~~~~~~~~---~~~~l~~~~~---d----g~i~iw~~~~~-------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~ 124 (290)
......|+|+|+ ++.++++-+. + ..|..|+.... +.+ ..+.. .......|.|.|+|.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356789999995 4555555432 3 56777776543 111 11221 1112467999999986666
Q ss_pred EeC-------------CCcEEEEcCCCCc-------eEEEEecCCCCEEEEEEcC-CCCEEEEeeCCC---eEEEEECCc
Q 022910 125 GGL-------------DGLVQIWDPSSGN-------LKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDS---TVWMWNADR 180 (290)
Q Consensus 125 ~~~-------------dg~i~i~d~~~~~-------~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg---~i~i~d~~~ 180 (290)
.+. .|.|.-++....- ....+.........++|+| .+.++++-.... .|.+..--.
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~ 231 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGG 231 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTC
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCC
Confidence 432 2456655554220 0112221222356799999 566555432221 233322110
Q ss_pred --------c--------cEEEeeecCCCCeEEEEEc-------CCCCEEEEEeCCCeEEEEcCCCC-eee--EEEeCCCC
Q 022910 181 --------A--------AYLNMFSGHGSSVTCGDFT-------PDGKTICTGSDDATLRVWNPKSG-ENI--HVIRGHPY 234 (290)
Q Consensus 181 --------~--------~~~~~~~~~~~~i~~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~~~ 234 (290)
+ .++..+......+..++|. .++.++++....+.|..+++... ... ..+.. .
T Consensus 232 nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~--~ 309 (354)
T 3a9g_A 232 NYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK--N 309 (354)
T ss_dssp BCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT--T
T ss_pred cCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc--C
Confidence 0 1222221123457788884 46777777777788988888753 221 22221 1
Q ss_pred cccCeEEEEEcCCCCEEEEEe
Q 022910 235 HTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~ 255 (290)
....+..+++.|+|.++++..
T Consensus 310 ~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 310 VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCeeEEEECCCCcEEEEEe
Confidence 245688999999997776664
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.82 E-value=0.039 Score=45.06 Aligned_cols=91 Identities=18% Similarity=0.306 Sum_probs=47.3
Q ss_pred CCcEEEEecC-CCcEEEEEccC--Ceee--eeec-cccCCEEEEEECCCCCEEEEEeC-C---------CcEEEEcCCCC
Q 022910 76 DATLVATGGG-DDKGFFWRINQ--GDWA--SEIQ-GHKDSVSSLAFSMDGQLLASGGL-D---------GLVQIWDPSSG 139 (290)
Q Consensus 76 ~~~~l~~~~~-dg~i~iw~~~~--~~~~--~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d---------g~i~i~d~~~~ 139 (290)
++.+++.|+. ...+.+||+.+ .+.. ..+. .......++.+ +++.++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4566666654 34688888863 3322 2222 11112222333 5666666665 2 46889998887
Q ss_pred ceEEEEecC-C--CCEEEEEEcCCCCEEEEeeCC
Q 022910 140 NLKCTLEGP-G--GGVEWVSWHPRGHIVLAGSED 170 (290)
Q Consensus 140 ~~~~~~~~~-~--~~i~~i~~~~~~~~l~~~~~d 170 (290)
+....-... . ....++. .++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 543322111 1 1222232 467788888754
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.81 E-value=0.12 Score=41.24 Aligned_cols=170 Identities=8% Similarity=0.037 Sum_probs=93.6
Q ss_pred CCcEEEEecC-CCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCC--------------CcEEEEcCCCCc
Q 022910 76 DATLVATGGG-DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD--------------GLVQIWDPSSGN 140 (290)
Q Consensus 76 ~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~ 140 (290)
++.+.++... ++.|...+..... ...+... .+--+++++.+|+-+... ..|+..++..++
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred CCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 4444444332 3445444443322 3333321 133457889988877543 367777777665
Q ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEee----CCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeC-CCeE
Q 022910 141 LKCTLEGPGGGVEWVSWHPRGHIVLAGS----EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-DATL 215 (290)
Q Consensus 141 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i 215 (290)
...... .. ...|++++++|+-.. ....|+..++.... ..++..+.. ..++|+++.|+-.+. ...|
T Consensus 100 ~~~l~~-~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 100 STVLDP-DP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CEEEEC-SC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred ceEeec-CC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 433322 21 236777888888765 34567777776544 333433322 345677888775554 6788
Q ss_pred EEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC--CcEEEEEcCC
Q 022910 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--GSVHMVNITT 267 (290)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~wd~~~ 267 (290)
.+.++..+.....+.. ... ..+.|++.+|+-.... ..|..-++..
T Consensus 170 y~~~l~g~~~~~l~~~------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 170 YRYDTASQSEALFYDC------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEETTTTEEEEEECS------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEEECCCCCEEEEeCC------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 8888877665433322 111 2355877777665433 2455555543
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.77 E-value=0.15 Score=40.73 Aligned_cols=174 Identities=5% Similarity=-0.010 Sum_probs=98.4
Q ss_pred EECCCCCcEEEEecCC-------------CcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEe----CCCcEEE
Q 022910 71 ACSPTDATLVATGGGD-------------DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----LDGLVQI 133 (290)
Q Consensus 71 ~~~~~~~~~l~~~~~d-------------g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~i 133 (290)
-+++.+..+..+...+ ..|+..++...+... +. ... +..|++++++|+-.. ....|+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PDP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CSC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cCC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 4566455555555443 356666666554322 22 112 236777888888765 3445666
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEcCCCCEEEEeeC-CCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 212 (290)
.++..... ..+..+.. ..++++++.|+-.+. ...|++.++..+.....+. .... ..+.|++.+|+-....
T Consensus 134 ~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcC
Confidence 66664443 34443332 456777887776654 6789999987765443333 2222 3456888888765543
Q ss_pred --CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeC--CCcEEEEEcC
Q 022910 213 --ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK--DGSVHMVNIT 266 (290)
Q Consensus 213 --g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~ 266 (290)
..|..-++..... ..+.. ..+ ..|+|++.+|+-+.. .+.|..-++.
T Consensus 205 ~~~~I~~~~ldG~~~-~~Lt~-----~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 205 RDNAIVHVNINNPNP-VVLTE-----ANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp GTTEEEEECSSSCCC-EECSC-----SCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred CCcEEEEEECCCCCe-EEEeC-----CCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 4677777765543 33332 223 236777777765532 3566666664
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.028 Score=45.63 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=74.1
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEEecC-CCCEEEEEEc--C-CCCEEEEe-eCCCeEEEEECCcccEEEeeec----C
Q 022910 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGP-GGGVEWVSWH--P-RGHIVLAG-SEDSTVWMWNADRAAYLNMFSG----H 190 (290)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~i~~~--~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~ 190 (290)
..+++++.||.|+-+|..+|+.+-.++.. ..++....-. + ++..++.. +.||.|+.++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999999999999998888754 1222221100 1 22334443 6899999999988854433321 2
Q ss_pred CCCeEE---EEE-c----CCCCEEEEEeCCCeEEEEcCCCCeeeEEEeC
Q 022910 191 GSSVTC---GDF-T----PDGKTICTGSDDATLRVWNPKSGENIHVIRG 231 (290)
Q Consensus 191 ~~~i~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 231 (290)
.+++.. ..+ . ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 223321 000 0 1356789999999999999999999988874
No 343
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.57 E-value=0.22 Score=40.06 Aligned_cols=198 Identities=11% Similarity=0.127 Sum_probs=117.2
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEccC-Ceeeeeeccc----cCCEEEEEECCCCCEEEEEeC-------CCcEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGGL-------DGLVQ 132 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-------dg~i~ 132 (290)
.+|.--.|-. . ..|+..+ +..|+-|++.. ..+.+.+..| ...|.....+++.++++..+- .|.+.
T Consensus 107 e~VvfWkWis-~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQ 183 (365)
T 2xzh_A 107 DDVTFWKWIS-L-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQ 183 (365)
T ss_dssp SCEEEEEECS-S-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEE
T ss_pred CccEEEEecC-C-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEE
Confidence 3455555553 2 2333322 35788998864 3444545443 346777778889998766542 47888
Q ss_pred EEcCCCCceEEEEecCCCCEEEEEEcC--C-CCEEEEeeC---CCeEEEEECCcc---c------EEEeeec---CCCCe
Q 022910 133 IWDPSSGNLKCTLEGPGGGVEWVSWHP--R-GHIVLAGSE---DSTVWMWNADRA---A------YLNMFSG---HGSSV 194 (290)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~i~~~~--~-~~~l~~~~~---dg~i~i~d~~~~---~------~~~~~~~---~~~~i 194 (290)
+|..+.+ ..+.+.+|.+....+.+.- . ..+|+.+.. .+.+.+.++... . .+..+.. ...-.
T Consensus 184 LYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFP 262 (365)
T 2xzh_A 184 LYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 262 (365)
T ss_dssp EEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCE
T ss_pred EEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCce
Confidence 9988754 3456666654333232211 1 123443333 268999988442 1 1111111 23455
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 022910 195 TCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (290)
Q Consensus 195 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 269 (290)
.++..++.-..++.-+.-|.|++||+.++.++..-+- ....|-..+-+....-+++....|.|.-..+...+
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI---S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc---CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 6788898888999999999999999999999877665 34455444444333344445566766665555433
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.56 E-value=0.28 Score=41.12 Aligned_cols=180 Identities=9% Similarity=0.143 Sum_probs=113.4
Q ss_pred CCcEEEEEccC-Ceeeeeeccc----cCCEEEEEECCCCCEEEEEeC-------CCcEEEEcCCCCceEEEEecCCCCEE
Q 022910 86 DDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGGL-------DGLVQIWDPSSGNLKCTLEGPGGGVE 153 (290)
Q Consensus 86 dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~ 153 (290)
+..|+-|++.. ..+++.+..| ...|.....+++.++++..+- .|.+.+|..+.+. .+.+.+|.+...
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeE
Confidence 36799999864 3445555443 346777788899998775542 4788899987643 456677765443
Q ss_pred EEEEcCC---CCEEEEeeC---CCeEEEEECCcc---c------EEEeee---cCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 022910 154 WVSWHPR---GHIVLAGSE---DSTVWMWNADRA---A------YLNMFS---GHGSSVTCGDFTPDGKTICTGSDDATL 215 (290)
Q Consensus 154 ~i~~~~~---~~~l~~~~~---dg~i~i~d~~~~---~------~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i 215 (290)
.+.+..+ ..+|+.+.. .+.+.|.++... . .+..+. ....-..++..++.-..++.-+.-|.|
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i 282 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceE
Confidence 3333211 124444443 378999998543 1 111111 123445688899988899999999999
Q ss_pred EEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 022910 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (290)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 269 (290)
++||+.++.++..-+- ....|-..+-.....-+++....|.|.-..+....
T Consensus 283 ~lyDleTgt~i~~nrI---s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 283 HLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEETTTCCEEEEEEC---CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred EEEecccceeeeeecc---cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 9999999999877664 34555544444444445555577776666555433
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.32 E-value=0.1 Score=46.96 Aligned_cols=147 Identities=13% Similarity=0.235 Sum_probs=81.4
Q ss_pred CCcEEEEecCC------CcEEEEEccCCeeeee--eccccCCEEEEEECCCCCEEEEEeCCC--cEEEEcCCCCceEEEE
Q 022910 76 DATLVATGGGD------DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLKCTL 145 (290)
Q Consensus 76 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~ 145 (290)
++.+++.|+.+ ..+.+||..+.+.... +...... .+++...++..++.|+.++ .+.+||+.+.+....-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 44566666643 2477888887654432 2211111 2233324778888887654 6999999887644322
Q ss_pred e-----cCCCCEEEEEEcCC-CCEEEEeeC--C-----CeEEEEECCccc------EEEeee---cCCCCeEEEEEcCCC
Q 022910 146 E-----GPGGGVEWVSWHPR-GHIVLAGSE--D-----STVWMWNADRAA------YLNMFS---GHGSSVTCGDFTPDG 203 (290)
Q Consensus 146 ~-----~~~~~i~~i~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~------~~~~~~---~~~~~i~~~~~~~~~ 203 (290)
. .......++.+... +.+++.|+. + ..+.+||+.+.. ...... .......++ ...++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~ 608 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPR 608 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETT
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCC
Confidence 1 11222233555554 667777765 2 458999998776 221111 111122223 33336
Q ss_pred CEEEEEeC--------CCeEEEEcCCCCe
Q 022910 204 KTICTGSD--------DATLRVWNPKSGE 224 (290)
Q Consensus 204 ~~l~~~~~--------dg~i~i~d~~~~~ 224 (290)
.+++.|+. ...|.+||+.+.+
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 67777764 3468999998764
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.08 E-value=0.42 Score=46.17 Aligned_cols=198 Identities=10% Similarity=0.122 Sum_probs=110.8
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccC-Ceeeeeeccc----cCCEEEEEECCCCCEEEEEe-------CCCcEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGG-------LDGLVQI 133 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~i 133 (290)
+|.--.|-. ...|+..+ +..|+-|++.. ..+++.+..| ...|..-..+++.++++..+ -.|.+.+
T Consensus 107 ~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL 183 (1630)
T 1xi4_A 107 DVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (1630)
T ss_pred CceEEEecC--CCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence 454555553 22333322 35799999864 2344444444 35677777788889877543 3588889
Q ss_pred EcCCCCceEEEEecCCCCEEEEEEc--CC-CCEEEEeeC---CCeEEEEECCcc---c-EE-----Eeeec---CCCCeE
Q 022910 134 WDPSSGNLKCTLEGPGGGVEWVSWH--PR-GHIVLAGSE---DSTVWMWNADRA---A-YL-----NMFSG---HGSSVT 195 (290)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~i~~~--~~-~~~l~~~~~---dg~i~i~d~~~~---~-~~-----~~~~~---~~~~i~ 195 (290)
|..+.+. .+.+.+|.+....+... +. ...++.+.. .+.+.|.++... . .. ..+.. ...-..
T Consensus 184 yS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv 262 (1630)
T 1xi4_A 184 YSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 262 (1630)
T ss_pred eeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcce
Confidence 9877543 33445554433333321 11 123332222 368888888543 1 11 11111 133345
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 022910 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (290)
Q Consensus 196 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 270 (290)
++..++.-..++.-+.-|.|.+||+.++.++..-+. ...+|-..+-.....-+++....|.|.-..+.....
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri---s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhccc---cCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 778888778888889999999999999988765443 333443333333333344444666666555554443
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.01 E-value=1.1 Score=42.73 Aligned_cols=204 Identities=11% Similarity=0.040 Sum_probs=110.1
Q ss_pred EEEEecCCCcEEEEEccCCeeeeee-ccccCCEEEEEECCC------CCEEEEEeC-CCcEEEEcCCCCceEEEEecC-C
Q 022910 79 LVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMD------GQLLASGGL-DGLVQIWDPSSGNLKCTLEGP-G 149 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~------~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~ 149 (290)
+++.++ .+.+.++.+..++..... ..-...|.|+++.|. ++++++|.. |++|+|+++.+.+.+...... .
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~ 603 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE 603 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC
Confidence 344443 577888877755432211 123567999999763 368999997 999999999987766544322 1
Q ss_pred CCEEEEEEc--CCCCEEEEeeCCCeEEEEECC--cccEEE--eeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCC
Q 022910 150 GGVEWVSWH--PRGHIVLAGSEDSTVWMWNAD--RAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (290)
Q Consensus 150 ~~i~~i~~~--~~~~~l~~~~~dg~i~i~d~~--~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 223 (290)
....++.+. ....+|.+|-.+|.+..+.+. ++.... +..-...++.-..+...+..-+.+..+....+|--+ +
T Consensus 604 ~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~ 682 (1158)
T 3ei3_A 604 IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-H 682 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-S
T ss_pred CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-C
Confidence 234444443 234588999999998766654 343322 122223455544444444433333334544455433 2
Q ss_pred eeeEEEeCCCCcccCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCc--EEEEEccCCCcEEEEEEecC
Q 022910 224 ENIHVIRGHPYHTEGLTCLTISAD--STLALSGSKDGSVHMVNITTGK--VVSSLVSHTDSIECIGFSRS 289 (290)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~s~d 289 (290)
+.. +.... ...--....|+.. ..-++..+ ++.+++..+.... .+++++- ...++.++++|.
T Consensus 683 ~l~--~s~l~-~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y~~~ 747 (1158)
T 3ei3_A 683 KLV--FSNVN-LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPL-YESPRKICYQEV 747 (1158)
T ss_dssp SEE--EEEBS-SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEEC-SSEEEEEEEEGG
T ss_pred ceE--EeccC-hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeC-CCCceEEEEcCC
Confidence 221 11111 1112233345431 23344333 4568888875422 3444443 457788888774
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.74 E-value=0.55 Score=36.97 Aligned_cols=183 Identities=14% Similarity=0.084 Sum_probs=92.1
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (290)
.|..++... ...++. . +|.|+.|-......+..-..-...|..++... .+.+... +|.|+.|-......+..-
T Consensus 64 ~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCC
Confidence 566666543 223333 3 78888887654221111111124677776643 3444445 888999865542211111
Q ss_pred ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee
Q 022910 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (290)
Q Consensus 146 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 225 (290)
......|..++.-..... + -. +|.|+.|-....-.+.........|..++....- .++. .+|.|+.|=......
T Consensus 137 ~~~~~~i~~i~~G~~~~~-~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gq 210 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYTAL-A-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQ 210 (282)
T ss_dssp GGGGSSEEEEEECSSEEE-E-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTST
T ss_pred ccCCCCeEEEEcccCEEE-E-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCC
Confidence 112235777765433322 2 23 6899999765422111111123467777665432 2333 589999996554322
Q ss_pred eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 022910 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
+.. . ......|..++..... .++.. +|.|+.|=...
T Consensus 211 lg~-p--~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 211 TTV-P--TEALSGVSAIASGEWY-SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp TCC-C--GGGGSSCCEEEECSSC-EEEEE--TTEEEEESTTC
T ss_pred CCC-C--cccCCCceEEEcCCCE-EEEEE--CCEEEEecCCC
Confidence 211 1 0123456666655433 33333 89999996544
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.45 E-value=0.53 Score=37.08 Aligned_cols=182 Identities=17% Similarity=0.079 Sum_probs=95.3
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (290)
.|..++... ...++. . +|.|+.|-......+..-......|..++.... +.+... +|.|+.|-......+-.-
T Consensus 25 ~i~~ia~G~--~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGY--FHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECS--SEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCC--CeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCCCCCCC
Confidence 577777653 233333 4 899999986653222111112345777766433 322234 899999976543221111
Q ss_pred ecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCee
Q 022910 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (290)
Q Consensus 146 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 225 (290)
..-...|..++.... +.+.-. +|.|+.|-....-.+.........|..++.... ..++-. +|.|+.|-......
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCC
Confidence 111235777776543 333334 899999976542211111112345777766433 233333 79999997654322
Q ss_pred eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
+.. . ......|..++.... ..++. .+|.|+.|=..
T Consensus 172 lg~-p--~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n 206 (282)
T 3qhy_B 172 TTV-P--AEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDN 206 (282)
T ss_dssp TSC-C--GGGGSSEEEEEECSS-EEEEE--ETTEEEEEECC
T ss_pred CCC-c--eecCCCeEEEEecCC-EEEEE--ECCeEEEEECC
Confidence 211 1 112345777766543 23333 48899998654
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.30 E-value=0.15 Score=44.03 Aligned_cols=101 Identities=21% Similarity=0.150 Sum_probs=68.8
Q ss_pred CCEEEEEECCCCCEEEEEeC-CCcEEEEcCCCC------ce-------EEEEecCCCCEEEEEEcCCCCEEEEeeCCCeE
Q 022910 108 DSVSSLAFSMDGQLLASGGL-DGLVQIWDPSSG------NL-------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTV 173 (290)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~------~~-------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i 173 (290)
.....+.++|+|+++++++. +.++.++++.+. +. ..... ........+|.++|+...+-.-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceE
Confidence 34467889999998877654 789999998742 11 22233 33457789999999666666789999
Q ss_pred EEEECCcc----------cEEEeeecCCCCeEEEEE------cCCCCEEEEEe
Q 022910 174 WMWNADRA----------AYLNMFSGHGSSVTCGDF------TPDGKTICTGS 210 (290)
Q Consensus 174 ~i~d~~~~----------~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~ 210 (290)
..|++... ..+.++..|-.+ -.+.- .|+|++|++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 99999764 355555544333 22322 46888888865
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.28 E-value=1 Score=37.14 Aligned_cols=219 Identities=14% Similarity=0.076 Sum_probs=107.2
Q ss_pred cCEEEEEECCCC-CcEEEEecCCCcEEEEEccCCe--eeeeec----------------cccCCEEEEEECCC-CCEEEE
Q 022910 65 DEVYSVACSPTD-ATLVATGGGDDKGFFWRINQGD--WASEIQ----------------GHKDSVSSLAFSMD-GQLLAS 124 (290)
Q Consensus 65 ~~v~~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~--~~~~~~----------------~~~~~i~~~~~~~~-~~~l~~ 124 (290)
..|.++++.|.+ ...|..++..+.|...+-.... .+..+. .....+.+|.+.|. ...|+.
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 368889998743 3444455444544433211111 111110 01235789999874 344555
Q ss_pred EeCCCcEEEEcCCCCceEEEEecC-------------CCCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeeec-
Q 022910 125 GGLDGLVQIWDPSSGNLKCTLEGP-------------GGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSG- 189 (290)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 189 (290)
+...+-|...+ ..++.-..+... ...+.++.++|. ...|+++...+ |+..+- .++.-..+..
T Consensus 195 g~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~ 271 (394)
T 3b7f_A 195 GMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDA 271 (394)
T ss_dssp EEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGG
T ss_pred EECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCC
Confidence 54444454443 223322222110 124889999986 35666666544 544442 2332222221
Q ss_pred -CC---CCeEEEEEcC-CCCEEEEEeC-----------CCeEEEEcCCC-CeeeEEEeC-CCCcc----cCeEEEEEcCC
Q 022910 190 -HG---SSVTCGDFTP-DGKTICTGSD-----------DATLRVWNPKS-GENIHVIRG-HPYHT----EGLTCLTISAD 247 (290)
Q Consensus 190 -~~---~~i~~~~~~~-~~~~l~~~~~-----------dg~i~i~d~~~-~~~~~~~~~-~~~~~----~~v~~~~~~~~ 247 (290)
.. ..+.++.++| +...|+++.. ++...+|.... ++....+.. .+... .....++++|.
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~ 351 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAH 351 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCS
T ss_pred CCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCC
Confidence 11 3456788887 3444555432 23344554443 333333321 11100 01235788874
Q ss_pred -CCEEEEEeCCCcEEEEEcCCCcEEEEEccCCCcEEEEEEe
Q 022910 248 -STLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFS 287 (290)
Q Consensus 248 -~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~s 287 (290)
...|+.++..+.|..- ...++.-..+..+-..|.+|+|.
T Consensus 352 ~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 352 APVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence 4556677666666533 23455445555445578888875
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.66 E-value=1.6 Score=36.05 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=70.3
Q ss_pred CEEEEEECCC--CCEEEEEeCCCcEEEEcCCCCceEEEEec-------------------CCCCEEEEEEcCC-CCEEEE
Q 022910 109 SVSSLAFSMD--GQLLASGGLDGLVQIWDPSSGNLKCTLEG-------------------PGGGVEWVSWHPR-GHIVLA 166 (290)
Q Consensus 109 ~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------~~~~i~~i~~~~~-~~~l~~ 166 (290)
.|.++++.|. ...|+++...+-|...+- .++.-..+.. ....+.+|.++|. ...|++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 5788999873 455666655565555532 2322222211 1235788999883 344555
Q ss_pred eeCCCeEEEEECCcccEEEeeec-C------------CCCeEEEEEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEEeCC
Q 022910 167 GSEDSTVWMWNADRAAYLNMFSG-H------------GSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGH 232 (290)
Q Consensus 167 ~~~dg~i~i~d~~~~~~~~~~~~-~------------~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 232 (290)
+...+.|...+- .++.-..+.. . ...+.+|.+.|. ...|+++...+ |...+- .++....+...
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~ 271 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDA 271 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGG
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCC
Confidence 554454444322 2222121110 0 134889999985 46777776554 544432 23332222210
Q ss_pred CCcc---cCeEEEEEcC-CCCEEEEE
Q 022910 233 PYHT---EGLTCLTISA-DSTLALSG 254 (290)
Q Consensus 233 ~~~~---~~v~~~~~~~-~~~~l~~~ 254 (290)
... ..+..+.++| +...|+++
T Consensus 272 -l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 272 -MPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp -SCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred -CCCCCccceEEEEECCCCCCEEEEE
Confidence 011 3356788876 33444444
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.32 E-value=1.4 Score=37.51 Aligned_cols=107 Identities=9% Similarity=0.009 Sum_probs=61.2
Q ss_pred CCEEEEEEcCCCC-EEEEeeCCCeEEEEECCccc---EEEeee---------cCCCCeEEEEEcCC----CCEEEEEeC-
Q 022910 150 GGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAA---YLNMFS---------GHGSSVTCGDFTPD----GKTICTGSD- 211 (290)
Q Consensus 150 ~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~---~~~~~~---------~~~~~i~~~~~~~~----~~~l~~~~~- 211 (290)
...+.|+|.|++. .|+++...|.|++++..... .+..+. .....+..|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3578899999986 46666778999999754321 122111 11356789999995 333333322
Q ss_pred -C----------CeEEEEcCCC----------CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCC
Q 022910 212 -D----------ATLRVWNPKS----------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (290)
Q Consensus 212 -d----------g~i~i~d~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 257 (290)
+ ..|.-|.+.. .+.+..+... ........|+|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~-~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL-HRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES-SSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC-CCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455432 1222222211 123346889999999877766543
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.56 E-value=3.8 Score=33.72 Aligned_cols=159 Identities=9% Similarity=0.037 Sum_probs=97.9
Q ss_pred CCEEEEEECCCCCEEEEE-eC--------------CCcEEEEcCCCC--ceEEEEecC------CCCEEEEEEc---CC-
Q 022910 108 DSVSSLAFSMDGQLLASG-GL--------------DGLVQIWDPSSG--NLKCTLEGP------GGGVEWVSWH---PR- 160 (290)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~-~~--------------dg~i~i~d~~~~--~~~~~~~~~------~~~i~~i~~~---~~- 160 (290)
-.|..+...+.+++-+.= +. --.|.+||+.++ +.++++.-. ...+..+.+. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 367788887776643331 11 236889999999 888877542 3457788887 22
Q ss_pred ---CCEEEEee-CCCeEEEEECCcccEEEeeec----C--------------CCCeEEEEEcCC----CCEEEEEeCCC-
Q 022910 161 ---GHIVLAGS-EDSTVWMWNADRAAYLNMFSG----H--------------GSSVTCGDFTPD----GKTICTGSDDA- 213 (290)
Q Consensus 161 ---~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~----~--------------~~~i~~~~~~~~----~~~l~~~~~dg- 213 (290)
+.+++.+. ..+-|.++|+.+++.-+.... . ...+..|+++|+ ++.|+-....+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 34444444 467899999998865544320 0 246888999997 77777666555
Q ss_pred eEEEEc---CCC---CeeeEEEeCCCCcccCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCC
Q 022910 214 TLRVWN---PKS---GENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSKDGSVHMVNITT 267 (290)
Q Consensus 214 ~i~i~d---~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~wd~~~ 267 (290)
.++-.. ++. ...++.+.. ......-..+++. .+|.++++--....|..|+..+
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred cEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 333322 121 122232221 1112334456775 5788888878888999999875
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.76 E-value=4.8 Score=33.13 Aligned_cols=191 Identities=10% Similarity=0.073 Sum_probs=114.0
Q ss_pred CcCEEEEEECCCCCcEEEE--ecC-------------CCcEEEEEccCC--eeeeeecc------ccCCEEEEEEC---C
Q 022910 64 SDEVYSVACSPTDATLVAT--GGG-------------DDKGFFWRINQG--DWASEIQG------HKDSVSSLAFS---M 117 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~--~~~-------------dg~i~iw~~~~~--~~~~~~~~------~~~~i~~~~~~---~ 117 (290)
--.|..+...+ .+.+.+. |.- --.|.+||+.+. +.++++.- ....+..+.+. |
T Consensus 86 lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred eEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 34678888887 4444432 211 136889999999 88877642 23457888887 2
Q ss_pred C----CCEEEEEe-CCCcEEEEcCCCCceEEEEec----C--------------CCCEEEEEEcCC----CCEEEEeeCC
Q 022910 118 D----GQLLASGG-LDGLVQIWDPSSGNLKCTLEG----P--------------GGGVEWVSWHPR----GHIVLAGSED 170 (290)
Q Consensus 118 ~----~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~----~--------------~~~i~~i~~~~~----~~~l~~~~~d 170 (290)
. +.+++.+. ..+-|.|+|+.+++..+.+.. . ...+..|+++|+ ++.|+...-.
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 2 23444443 467899999998876544310 0 135888899987 6677666654
Q ss_pred C-eEEEEE---CCccc---EEEeeecC--CCCeEEEEEc-CCCCEEEEEeCCCeEEEEcCCC-C---eeeEEEeCCCCcc
Q 022910 171 S-TVWMWN---ADRAA---YLNMFSGH--GSSVTCGDFT-PDGKTICTGSDDATLRVWNPKS-G---ENIHVIRGHPYHT 236 (290)
Q Consensus 171 g-~i~i~d---~~~~~---~~~~~~~~--~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~~-~---~~~~~~~~~~~~~ 236 (290)
+ .++-.. |+... .++.+-.. ...-..+++. .+|.++++--....|..|+..+ . .....+.... .-
T Consensus 245 s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l 323 (381)
T 3q6k_A 245 AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RF 323 (381)
T ss_dssp CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TC
T ss_pred CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-Cc
Confidence 4 344333 22221 12222111 2344566776 5777777778888999999875 1 2233443322 34
Q ss_pred cCeEEEEEcCCCCEEEEEeC
Q 022910 237 EGLTCLTISADSTLALSGSK 256 (290)
Q Consensus 237 ~~v~~~~~~~~~~~l~~~~~ 256 (290)
..+..+.+.++|.+.+..+.
T Consensus 324 ~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 324 VFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CSEEEEEECTTSCEEEEECS
T ss_pred cccCeEEECCCCeEEEEECc
Confidence 45778888777776665543
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.71 E-value=6.2 Score=36.94 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=33.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777777888899999999999999999999888763
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.00 E-value=6.6 Score=33.30 Aligned_cols=104 Identities=13% Similarity=0.016 Sum_probs=57.7
Q ss_pred cCEEEEEECCCCC-cEEEEecCCCcEEEEEccCCe---eeeeec---------cccCCEEEEEECCC---CCEEEEE-eC
Q 022910 65 DEVYSVACSPTDA-TLVATGGGDDKGFFWRINQGD---WASEIQ---------GHKDSVSSLAFSMD---GQLLASG-GL 127 (290)
Q Consensus 65 ~~v~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~---~~~~~~---------~~~~~i~~~~~~~~---~~~l~~~-~~ 127 (290)
..-..|+|.|++. .+|++ ...|.|++++..... .+..+. ........|+|+|+ ..+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3557999999443 35544 567999999754221 112111 11457889999996 3333333 21
Q ss_pred --C----------CcEEEEcCCC----------CceEEEEe--cCCCCEEEEEEcCCCCEEEEeeC
Q 022910 128 --D----------GLVQIWDPSS----------GNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSE 169 (290)
Q Consensus 128 --d----------g~i~i~d~~~----------~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~ 169 (290)
+ ..|.-|.+.. .+.+..+. ........|+|.|+|.++++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1344455432 12233332 11234688999999987776554
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.13 E-value=8.8 Score=35.92 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=32.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEe
Q 022910 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (290)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 146 (290)
.+.+++..++..++++.+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777788888899999999999999999999887653
No 359
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=87.71 E-value=16 Score=33.09 Aligned_cols=187 Identities=14% Similarity=0.153 Sum_probs=88.5
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec--c----ccCCEEEEEECCC-CCEEEEEeCC-------CcE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--G----HKDSVSSLAFSMD-GQLLASGGLD-------GLV 131 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~----~~~~i~~~~~~~~-~~~l~~~~~d-------g~i 131 (290)
.|..|+++|.+...++++...+.|...+-.......... . ....|.+|++.|. .+.++++... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 899999999766666667656666555432222222211 1 1246999999984 3344443321 123
Q ss_pred EEEcC-CCCceEEEEec-CC--------CCEEEEEEcCC-CCEEEEeeCC-CeEEEEECCccc---EEEeeec-------
Q 022910 132 QIWDP-SSGNLKCTLEG-PG--------GGVEWVSWHPR-GHIVLAGSED-STVWMWNADRAA---YLNMFSG------- 189 (290)
Q Consensus 132 ~i~d~-~~~~~~~~~~~-~~--------~~i~~i~~~~~-~~~l~~~~~d-g~i~i~d~~~~~---~~~~~~~------- 189 (290)
.||.- ..++.-..+.. .. ..+..|+++|. ...++.+... +.|+ .....++ .+..+..
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~-~S~DgG~tW~~~~~~~~~~~~~~~ 182 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLW-RSTDYGVTWSKVESFPNPGTYIYD 182 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEE-EESSTTSSCEECTTCCCCCCCBSC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEE-EeCCCCcceecccCCCCCcccccC
Confidence 34433 33333222221 10 12467889885 3556666533 2222 2222222 1111111
Q ss_pred -------CCCCeEEEEEcCCC-------CEEEEEeCCCeEEEEcC-CCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE
Q 022910 190 -------HGSSVTCGDFTPDG-------KTICTGSDDATLRVWNP-KSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (290)
Q Consensus 190 -------~~~~i~~~~~~~~~-------~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (290)
....+..+.++|.. ..++++..++.-.+|-. ..++.-..+...+ .......+.++|++.++++.
T Consensus 183 p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p-~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 183 PNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQP-KGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp TTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCC-CSSEEEEEEECTTSEEEEEE
T ss_pred cccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCC-CcccceEEEECCCCeEEEEe
Confidence 11247778888743 25666655542223332 2344333333221 11122456678766655554
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.35 E-value=9.7 Score=30.30 Aligned_cols=186 Identities=8% Similarity=0.022 Sum_probs=106.9
Q ss_pred CCcEEEEecCCCcEEEEEccCCeee---------eeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcC---CCC----
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWA---------SEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP---SSG---- 139 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~---~~~---- 139 (290)
...++++.+.+|.|+--.+..-+.. ..++.. ..+..+........++..+..|.++-+.. ...
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4456778889999988876543211 112322 33444444445567777788888766543 222
Q ss_pred --ce---EEEEecCCCCEEEEEEcC---CCCEEEEeeCCCeEEEEECCccc-------EEEeeecCCCCeEEEEEcCCCC
Q 022910 140 --NL---KCTLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAA-------YLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 140 --~~---~~~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
.+ ...+. ....|.++...+ ...+|+..+..|.++...+.... ....+.. ...+..+.......
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 11 01122 223455554332 45678888999999998875432 2222333 44555555555566
Q ss_pred EEEEEeCCCeEEEEcCCCC----e---eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 205 TICTGSDDATLRVWNPKSG----E---NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~----~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
.++..+..|.+..+....- + -+..+... ....|..+..-.++..|++.+..|..+...+.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~--~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK--EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC--TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC--CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 7888889999888865421 1 11222211 23456666555556678888889988888873
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.54 E-value=9.3 Score=36.57 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEc
Q 022910 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 275 (290)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455566788899999999999999999999988764
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.48 E-value=4.1 Score=35.74 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=44.3
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEE
Q 022910 193 SVTCGDFTPDGKTICTGSDD------------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (290)
..-.|+|+|.|+++++-..+ ..+.+.+..+++....+... ....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P--~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC--CCccCcCeeECCCCCEEEEE
Confidence 34678999999966654332 24667777778776666654 56789999999999988775
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.00 E-value=11 Score=29.45 Aligned_cols=193 Identities=11% Similarity=0.041 Sum_probs=107.0
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEE---EccCCeeeeeeccccCCEEEEEECC--CCCEEEEEeCCCcEEEEcCCCC
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFW---RINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQIWDPSSG 139 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw---~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 139 (290)
+.+..+.-......++ .-+..|.++-- ++........+. ....|..+.. + +..+++..+..|.++...+...
T Consensus 24 D~~~~~~~~~t~~~ll-~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTEGLF-LVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTSCEE-EEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCCCEEE-EEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 3455444333233333 34456766543 333222111133 3456666644 4 4678999999999999876543
Q ss_pred c------eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc---------EEEeeecCCCCeEEEEEcCCCC
Q 022910 140 N------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA---------YLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 140 ~------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
. ....++. ...+..+........++..+..|.++.+....-. ..-.+. ....|..+...+++.
T Consensus 101 ~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 101 EYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEP 178 (276)
T ss_dssp TTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCS
T ss_pred hhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCC
Confidence 2 1112222 2345555555566688888899999888754321 111222 234566655555667
Q ss_pred EEEEEeCCCeEEEEcCCC-------CeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEE--EEcC
Q 022910 205 TICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM--VNIT 266 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~--wd~~ 266 (290)
.++..+..|.++...+.. ++-+..+. ....+..+........++..+..|.+.. +++.
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~----~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG----TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC----SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc----CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 888889999888876532 22222221 2334444433333446666777888777 7653
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=85.92 E-value=19 Score=32.38 Aligned_cols=199 Identities=8% Similarity=0.038 Sum_probs=102.1
Q ss_pred CEEEEE-ECCCCCcEEEEecCCC----cEEEEEccCCeeeee-ec-cccC------CEEEEEECCCCCEEEEE-------
Q 022910 66 EVYSVA-CSPTDATLVATGGGDD----KGFFWRINQGDWASE-IQ-GHKD------SVSSLAFSMDGQLLASG------- 125 (290)
Q Consensus 66 ~v~~~~-~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~-~~-~~~~------~i~~~~~~~~~~~l~~~------- 125 (290)
....+. ++|++...+++-+..| .++++|+.+++.+.. +. .-+. ....++|..+...+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 345566 7885555555544333 699999999887642 22 0001 11334776333333332
Q ss_pred ---eCCCcEEEEcCCCCc--eEEEEecCCCCE-EEEEEcCCCC-----EEEEee---CCCeEEEEECCc--ccEEEeeec
Q 022910 126 ---GLDGLVQIWDPSSGN--LKCTLEGPGGGV-EWVSWHPRGH-----IVLAGS---EDSTVWMWNADR--AAYLNMFSG 189 (290)
Q Consensus 126 ---~~dg~i~i~d~~~~~--~~~~~~~~~~~i-~~i~~~~~~~-----~l~~~~---~dg~i~i~d~~~--~~~~~~~~~ 189 (290)
+.-..|+.|.+-+.. -...+......+ .....++++. .+++.+ ....+++.+... ++. ..+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeec
Confidence 112568888876542 233444433332 2344455655 244333 224567777653 332 22222
Q ss_pred CCCCeEEEEEcCCCCEEEEE----------eCCCeEEEEcCCCCe-------eeEEEeCCCCcccCeEEEEEcCCCCEEE
Q 022910 190 HGSSVTCGDFTPDGKTICTG----------SDDATLRVWNPKSGE-------NIHVIRGHPYHTEGLTCLTISADSTLAL 252 (290)
Q Consensus 190 ~~~~i~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 252 (290)
... .. +..++.+.+++.. ...+.|.+.++.++. ....+-.+. ....+..+.|..+ .+++
T Consensus 289 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 289 PSD-AT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-ANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp CTT-CE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-TTEEEEEEEECSS-CEEE
T ss_pred CCc-ce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC-CCCeEEEEEEECC-EEEE
Confidence 221 11 2233455444422 246778888887632 233322222 3456788888865 5667
Q ss_pred EEeCCC--cEEEEEcCCCc
Q 022910 253 SGSKDG--SVHMVNITTGK 269 (290)
Q Consensus 253 ~~~~dg--~i~~wd~~~~~ 269 (290)
+...++ .|+++++.+++
T Consensus 365 ~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEEETTEEEEEEECEETTE
T ss_pred EEEECCEEEEEEEECCCCc
Confidence 776676 46777776664
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.50 E-value=13 Score=29.88 Aligned_cols=184 Identities=11% Similarity=0.050 Sum_probs=105.2
Q ss_pred CcEEEEecCCCcEEEEEccCC---------eeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEE---EcCCCC-----
Q 022910 77 ATLVATGGGDDKGFFWRINQG---------DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI---WDPSSG----- 139 (290)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i---~d~~~~----- 139 (290)
...+++.+..|.|+--.+.+- ..-..++ ....+..+........|+.-+..|.++- |++...
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 346777888898887664321 1111222 2334554444445556666666776654 444432
Q ss_pred -ceEE---EEecCCCCEEEEEEcC---CCCEEEEeeCCCeEEEEECCcccE-------EEeeecCCCCeEEEEEcCCCCE
Q 022910 140 -NLKC---TLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAAY-------LNMFSGHGSSVTCGDFTPDGKT 205 (290)
Q Consensus 140 -~~~~---~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~ 205 (290)
.++. .+. ....|.++..-+ +..++++.+..|.++...+..... ...+.. ...+..+........
T Consensus 82 G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ 159 (327)
T 3uc1_A 82 GQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDD 159 (327)
T ss_dssp CEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCE
T ss_pred CEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCE
Confidence 2211 122 233455554433 477999999999999998765322 122332 344555555555567
Q ss_pred EEEEeCCCeEEEEcCC--CCee-------eEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 206 ICTGSDDATLRVWNPK--SGEN-------IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 206 l~~~~~dg~i~i~d~~--~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
|+..+..|.+..+... .-.. +..+.. .....|.++...+.+.+|+..+..|.++.-.+
T Consensus 160 ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 160 LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF--NIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC--CTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEECCCeEEEEECcccccCcCCcCCCCeeeecC--CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 8888889988877665 2111 111111 13455777766666678889999999888775
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.32 E-value=10 Score=33.03 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=43.7
Q ss_pred CeEEEEEcCCCCEEEEEeC------------CCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCCCCEEEEEe
Q 022910 193 SVTCGDFTPDGKTICTGSD------------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (290)
....|.|.++|.+.++... ...|..++..+++....+... ....++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC--CCccccCCEECCCCCEEEEEE
Confidence 4577999999987774322 126778888778765555432 346789999999999888763
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.42 E-value=32 Score=31.40 Aligned_cols=148 Identities=16% Similarity=0.231 Sum_probs=75.6
Q ss_pred CcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeecc------ccCCEEEEEECCCC-CEEEEEeCCCc----EE
Q 022910 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDG-QLLASGGLDGL----VQ 132 (290)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~-~~l~~~~~dg~----i~ 132 (290)
.+.|.+|+++|.+...+++++..+.|...+=........... ....|.+|++.|.. ..++++..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999997677777777667665444222222221111 23479999999853 34444432211 23
Q ss_pred EE-cCCCCceEEEEecC-------C--CCEEEEEEcCC-CCEEEEeeCCCeEEEEECCcccEEEeee------cCCCCeE
Q 022910 133 IW-DPSSGNLKCTLEGP-------G--GGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVT 195 (290)
Q Consensus 133 i~-d~~~~~~~~~~~~~-------~--~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~i~ 195 (290)
|| ....++.-..+... . ..+..++++|. ...++.+...+.|.. ....++.-..+. .....+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCeE
Confidence 33 33444433333211 0 12456788874 345555553343321 222222111111 1124578
Q ss_pred EEEEcC-CCCEEEEEeCC
Q 022910 196 CGDFTP-DGKTICTGSDD 212 (290)
Q Consensus 196 ~~~~~~-~~~~l~~~~~d 212 (290)
.|.++| ++..++++..+
T Consensus 173 ~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEECTTSTTCEEEEESS
T ss_pred EEEECCCCCCEEEEEEcC
Confidence 899988 44566666654
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.91 E-value=10 Score=34.03 Aligned_cols=37 Identities=5% Similarity=0.157 Sum_probs=30.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEEcc
Q 022910 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 276 (290)
.|.++.+ +..+|++-+.|.++|+|++++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 467999999999999999999998887654
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=78.79 E-value=25 Score=28.70 Aligned_cols=144 Identities=15% Similarity=0.053 Sum_probs=83.8
Q ss_pred CCCCCcEEEEecCCCcEEEEEccC---------CeeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEE---cCCC--
Q 022910 73 SPTDATLVATGGGDDKGFFWRINQ---------GDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSS-- 138 (290)
Q Consensus 73 ~~~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~-- 138 (290)
-| ...++++.+.+|.|+--.+.. +.....++ ....+..+........|+..+..|.++-+ ++..
T Consensus 4 I~-~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 4 IA-PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CC-CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cc-CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 35 556788889999998766532 11222333 34455555555556667777777876654 3432
Q ss_pred ----CceEE---EEecCCCCEEEEEEcC---CCCEEEEeeCCCeEEEEECCccc-------EEEeeecCCCCeEEEEEcC
Q 022910 139 ----GNLKC---TLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAA-------YLNMFSGHGSSVTCGDFTP 201 (290)
Q Consensus 139 ----~~~~~---~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~ 201 (290)
|..+. .+. ....|.++..-. ...+|+.++..|.++...+.... ....+.. ...+..+....
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 21111 122 233455554432 35689999999999998865432 1122322 34455555555
Q ss_pred CCCEEEEEeCCCeEEEEcC
Q 022910 202 DGKTICTGSDDATLRVWNP 220 (290)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~ 220 (290)
....++..+..|.+..|..
T Consensus 160 ~~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp SCCEEEEEETTSEEEEEEG
T ss_pred CCceEEEEeCCCeEEEEEc
Confidence 5567777888888777754
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=77.94 E-value=22 Score=27.60 Aligned_cols=154 Identities=10% Similarity=-0.030 Sum_probs=89.4
Q ss_pred CcCEEEEEECCC-CCcEEEEecCCCcEEEEEccCCe------eeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEEcC
Q 022910 64 SDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD------WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (290)
Q Consensus 64 ~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (290)
...|..+-. +. ....++..+..|.++...+..-. ....++. ...+..+........++..+..|.+..+..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 445655543 31 34567788899999999876532 2222332 345556655556667888888998887764
Q ss_pred CC---------CceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc-------EEEeeecCCCCeEEEEEc
Q 022910 137 SS---------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-------YLNMFSGHGSSVTCGDFT 200 (290)
Q Consensus 137 ~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~ 200 (290)
.. |.....+. ....|..+...+++..++..+..|.++...+.... -+..+ .....+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 22 11111222 23456666555566788899999999998864322 22222 223444444333
Q ss_pred CCCCEEEEEeCCCeEEE--EcCC
Q 022910 201 PDGKTICTGSDDATLRV--WNPK 221 (290)
Q Consensus 201 ~~~~~l~~~~~dg~i~i--~d~~ 221 (290)
.....++..+..|.+.. ++..
T Consensus 223 ~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 223 KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCCEEEEEcCCCeEEEeeeCHH
Confidence 33345666667777666 6543
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=76.66 E-value=20 Score=31.24 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=43.4
Q ss_pred CEEEEEEcCCCCEEEEeeC------------CCeEEEEECCcccEEEeeecC-CCCeEEEEEcCCCCEEEEEe
Q 022910 151 GVEWVSWHPRGHIVLAGSE------------DSTVWMWNADRAAYLNMFSGH-GSSVTCGDFTPDGKTICTGS 210 (290)
Q Consensus 151 ~i~~i~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 210 (290)
....|.|.++|.+.++... ...+..++..+++....+... ...++.++|+|+++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4667999999987774322 226777777777766655543 45689999999999888764
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.51 E-value=15 Score=32.26 Aligned_cols=58 Identities=26% Similarity=0.452 Sum_probs=42.1
Q ss_pred EEEEEECCCCCEEEEEeCC------------CcEEEEcCCCCceEEEEecC-CCCEEEEEEcCCCCEEEEe
Q 022910 110 VSSLAFSMDGQLLASGGLD------------GLVQIWDPSSGNLKCTLEGP-GGGVEWVSWHPRGHIVLAG 167 (290)
Q Consensus 110 i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~ 167 (290)
.--|+|+|.|++++.-..+ ..+.+.+..+++....+..+ ...++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999966654322 34666777778877666654 4579999999999877765
No 373
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.10 E-value=64 Score=30.92 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=31.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCeeeEEEe
Q 022910 193 SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIR 230 (290)
Q Consensus 193 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 230 (290)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999877654
No 374
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=72.74 E-value=33 Score=27.09 Aligned_cols=185 Identities=12% Similarity=0.054 Sum_probs=101.0
Q ss_pred CCcEEEEecCCCcEEEEEccCCeeee---------eeccccCCEEEEEECCCCCEEEEEeCCCcEEEE---cCCCC----
Q 022910 76 DATLVATGGGDDKGFFWRINQGDWAS---------EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSG---- 139 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~---- 139 (290)
....+++.+.+|.|+--.+..-+... .++.. ..+..+........|+..+..|.++-+ ++...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 34567788889999877664422111 12222 334344444445566777777875544 44322
Q ss_pred --ceEE---EEecCCCCEEEEEEc---CCCCEEEEeeCCCeEEEEECCccc-------EEEeeecCCCCeEEEEEcCCCC
Q 022910 140 --NLKC---TLEGPGGGVEWVSWH---PRGHIVLAGSEDSTVWMWNADRAA-------YLNMFSGHGSSVTCGDFTPDGK 204 (290)
Q Consensus 140 --~~~~---~~~~~~~~i~~i~~~---~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~ 204 (290)
.++. .+. ....|..+..- .+..+++..+..|.++...+.... ....+... ..+..+.......
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 2111 122 23346555432 345688999999999999875321 11222323 4555555545556
Q ss_pred EEEEEeCCCeEEEEcCCCC-------eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 205 TICTGSDDATLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
.++..+..|.+..+....- .-+..+... ....|.++...+++..|++.+..|.++..++
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG--EGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC--CCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 7778888898877765321 111111111 3445666655555667888888998888876
No 375
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=72.68 E-value=35 Score=27.26 Aligned_cols=186 Identities=7% Similarity=-0.047 Sum_probs=103.1
Q ss_pred CCcEEEEecCCCcEEEEEccCC----eeeeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEE---cCCC------CceE
Q 022910 76 DATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSS------GNLK 142 (290)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~------~~~~ 142 (290)
....+++.+.+|.|+--.+..- .....++.. ..+..+........|+..+..|.++-+ ++.. |.++
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4556778889999987765421 111223333 334444444455567777778876554 3332 2211
Q ss_pred E---EEecCCCCEEEEEEcC---CCCEEEEeeCCCeEEEEECCcccE--------EEeeecCCCCeEEEEEcCCCCEEEE
Q 022910 143 C---TLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAAY--------LNMFSGHGSSVTCGDFTPDGKTICT 208 (290)
Q Consensus 143 ~---~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~l~~ 208 (290)
. .+. ....|..+..-+ ++.+++.++..|.++...+..... ...+.. ...+..+........++.
T Consensus 83 ~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 83 ANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEE
T ss_pred hhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEE
Confidence 1 122 223455543333 256899999999999998753221 112232 245555555555567888
Q ss_pred EeCCCeEEEEcCCCC-------eeeEEEeCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcC
Q 022910 209 GSDDATLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNIT 266 (290)
Q Consensus 209 ~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~ 266 (290)
.+..|.+..+....- +-+..+... ....|.++..-+.+. .|++.+..|..+..++.
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~--~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLK--EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCC--TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeC--CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 888998888765321 111222211 234466664444444 67788888888877764
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=70.06 E-value=8.6 Score=34.49 Aligned_cols=37 Identities=22% Similarity=0.220 Sum_probs=30.6
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEcCCCCceEEEEec
Q 022910 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (290)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (290)
.|.++.+ +..++++-+.|.++|+|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666555 477999999999999999999998877654
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=66.95 E-value=47 Score=26.54 Aligned_cols=157 Identities=11% Similarity=0.060 Sum_probs=91.5
Q ss_pred cCCEEEEEECC---CCCEEEEEeCCCcEEEEcCCCCc-------eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEE
Q 022910 107 KDSVSSLAFSM---DGQLLASGGLDGLVQIWDPSSGN-------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMW 176 (290)
Q Consensus 107 ~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 176 (290)
...|..+..-+ +..+++.++..|.++...+.... ....++. ...+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34555554332 56799999999999988764422 1122333 3345555555556678888888999888
Q ss_pred ECC--ccc---------EEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCC-------eeeEEEeCCCCcccC
Q 022910 177 NAD--RAA---------YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG-------ENIHVIRGHPYHTEG 238 (290)
Q Consensus 177 d~~--~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~ 238 (290)
... .-. ..-.+. ....|.++...+.+.+|+..+..|.++.-.+... +-+..+.... ....
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~-~~d~ 250 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDR-RRGR 250 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCT-TTCS
T ss_pred ECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecC-CCCe
Confidence 776 321 111122 3455777766666778999999999888764321 1122222111 1233
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 239 LTCLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 239 v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
+..+........++..+..|.+..+...
T Consensus 251 lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 251 LVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 4444443344456666777777777653
No 378
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=63.70 E-value=86 Score=28.41 Aligned_cols=150 Identities=17% Similarity=0.200 Sum_probs=72.8
Q ss_pred CCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeeeeec-c----------ccCCEEEEEECCC-CCEEEEEeCC--
Q 022910 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-G----------HKDSVSSLAFSMD-GQLLASGGLD-- 128 (290)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~----------~~~~i~~~~~~~~-~~~l~~~~~d-- 128 (290)
-.+.|.+|+++|.+..+++++...|.|....=.......... . ....+.++++.|. .+.++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 467999999999877777777766655433311112222111 0 2346899999883 3444443321
Q ss_pred ---CcEEEE-cCCCCceEEEEecC-------CCC--EEEEEEcCCC-CEEEEeeCCCeEEEEECCcccEEEeeec-----
Q 022910 129 ---GLVQIW-DPSSGNLKCTLEGP-------GGG--VEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSG----- 189 (290)
Q Consensus 129 ---g~i~i~-d~~~~~~~~~~~~~-------~~~--i~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~----- 189 (290)
....|| ....++.-..+... .+. ...++++|.. ..++++...+.|. .....++.-..+..
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~~~~~~~ 177 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMNQLPDSS 177 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECTTSCCCS
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccccCcccC
Confidence 112333 33334332222211 111 1357888753 4454455443333 22222322111111
Q ss_pred -CCCCeEEEEEcCC-CCEEEEEeCCC
Q 022910 190 -HGSSVTCGDFTPD-GKTICTGSDDA 213 (290)
Q Consensus 190 -~~~~i~~~~~~~~-~~~l~~~~~dg 213 (290)
....+..|.++|. ...++++..++
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCccceEEEEECCCCCCEEEEEEeCC
Confidence 1234778899884 34566655554
No 379
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=57.23 E-value=72 Score=25.40 Aligned_cols=157 Identities=6% Similarity=0.081 Sum_probs=85.4
Q ss_pred CCEEEE-EECC--CCCEEEEEeCCCcEEEEcCCCC------ceEE--EEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEE
Q 022910 108 DSVSSL-AFSM--DGQLLASGGLDGLVQIWDPSSG------NLKC--TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMW 176 (290)
Q Consensus 108 ~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~~------~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 176 (290)
..|..+ .... ++.+++.++..|.++...+... +-+. .+... ..+..+........++..+..|.+..+
T Consensus 92 e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf 170 (323)
T 1wp5_A 92 EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWF 170 (323)
T ss_dssp CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEE
T ss_pred CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 345554 3432 2568899999999998876421 1122 22322 445555555556678888889999888
Q ss_pred ECCcccE-------EEeeec-CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEcCCC-------CeeeEEEeCCCCcccCeE
Q 022910 177 NADRAAY-------LNMFSG-HGSSVTCGDFTPDGK-TICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLT 240 (290)
Q Consensus 177 d~~~~~~-------~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~ 240 (290)
....-.. ++-+.- ....|.++...+.+. .|++.+..|..+..++.. ++-+..++........+.
T Consensus 171 ~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~ 250 (323)
T 1wp5_A 171 DESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRIS 250 (323)
T ss_dssp EGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEE
T ss_pred EHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEE
Confidence 8643211 111111 234566665444444 788888888877766532 121222221111222344
Q ss_pred E-EEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 241 C-LTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 241 ~-~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
. +.+.+ +..++..+..|.+....+.
T Consensus 251 ~~~~v~~-~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 251 GFVVAQD-SDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EEEEECT-TCEEEEEETTSCEEEEEGG
T ss_pred EEEEeCC-CCeEEEEeCCCeEEEEEhh
Confidence 3 33333 3445566677777666654
No 380
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=56.91 E-value=71 Score=25.24 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=82.6
Q ss_pred EEEEecCCCcEEEEEccCC---------ee---eeeeccccCCEEEEEECC---CCCEEEEEeCCCcEEEEcCCCC----
Q 022910 79 LVATGGGDDKGFFWRINQG---------DW---ASEIQGHKDSVSSLAFSM---DGQLLASGGLDGLVQIWDPSSG---- 139 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~---------~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~---- 139 (290)
.++..+..|.++-+....- .. ...+. ....|..+...+ ...+|+..+..|.++...+...
T Consensus 60 ~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r 138 (312)
T 1suu_A 60 YLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK 138 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC--
T ss_pred EEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC
Confidence 3445566788776665421 11 11122 223455543332 4567888899999998876432
Q ss_pred ---ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCccc-------EEE--eeecCCCCeEEEEEcCCCCEEE
Q 022910 140 ---NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-------YLN--MFSGHGSSVTCGDFTPDGKTIC 207 (290)
Q Consensus 140 ---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~--~~~~~~~~i~~~~~~~~~~~l~ 207 (290)
.....+.. ...+..+........++..+..|.+..+.+..-. -++ .+. ....|.++...+.+..++
T Consensus 139 ~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~ 216 (312)
T 1suu_A 139 SRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLL 216 (312)
T ss_dssp --CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEE
T ss_pred CCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEE
Confidence 22222332 3456665555556678888999999999875421 111 222 244566666655566788
Q ss_pred EEeCCCeEEEEcCC
Q 022910 208 TGSDDATLRVWNPK 221 (290)
Q Consensus 208 ~~~~dg~i~i~d~~ 221 (290)
+.+..|.++...+.
T Consensus 217 ~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 217 IVSENGYGKRLNMS 230 (312)
T ss_dssp EEETTSEEEEEEGG
T ss_pred EEECCCceEEEEHH
Confidence 88899998888764
No 381
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=55.07 E-value=73 Score=27.23 Aligned_cols=67 Identities=10% Similarity=0.184 Sum_probs=44.0
Q ss_pred CEEEEEEcCC----C--CEEEEeeCCCeEEEEECCccc--------EEEeeec--CCCCeEEEEEcCCCCEEEEEeCCCe
Q 022910 151 GVEWVSWHPR----G--HIVLAGSEDSTVWMWNADRAA--------YLNMFSG--HGSSVTCGDFTPDGKTICTGSDDAT 214 (290)
Q Consensus 151 ~i~~i~~~~~----~--~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 214 (290)
..++|+...- + ..++.|+.+|.|.-.-+.... .+..+.. ...+|..|.+++...+|++++..+.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677766532 3 367889999987655443211 1222322 3578999999999999999998886
Q ss_pred EEE
Q 022910 215 LRV 217 (290)
Q Consensus 215 i~i 217 (290)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=55.00 E-value=69 Score=24.50 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=75.4
Q ss_pred EEEEEeCCCcEEEEcCCCCce-EEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCc-------ccEEE---eeec
Q 022910 121 LLASGGLDGLVQIWDPSSGNL-KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-------AAYLN---MFSG 189 (290)
Q Consensus 121 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~---~~~~ 189 (290)
.+++.+..|.|+--....... ...++... .+..+........|+..+..|.++-+.... +.++. .+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 455667777776555432111 11223233 344444443455666667778877665422 22111 111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCC-------CeeeEEEeCCCCcccCeEEEEEc-CCCCEEEEEeCCCcEE
Q 022910 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSKDGSVH 261 (290)
Q Consensus 190 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~ 261 (290)
....|.++....++.+|+..+..|.++...+.. +.....+. ....+..+... .....|+..+..|.+.
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~----~~d~lv~~~~~~~~~~~i~l~T~~G~~l 157 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP----ENAHVMPPVVIEDASDMLLAITQAGRML 157 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC----TTCCBCCCEECCCTTCEEEEEETTSEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC----CCCEEEEEEEecCCCCEEEEEcCCCeEE
Confidence 234566664434567788889999999886532 22222222 12344444444 3455777888899888
Q ss_pred EEEcC
Q 022910 262 MVNIT 266 (290)
Q Consensus 262 ~wd~~ 266 (290)
.+.+.
T Consensus 158 rf~~~ 162 (256)
T 1zvt_A 158 MFPVS 162 (256)
T ss_dssp EEEGG
T ss_pred EEEHH
Confidence 88764
No 383
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.09 E-value=1.3e+02 Score=27.10 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=53.4
Q ss_pred CEEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceEEEEecC-------CCCEEEEEEcCC-CCEEEEeeCC-------Ce
Q 022910 109 SVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEGP-------GGGVEWVSWHPR-GHIVLAGSED-------ST 172 (290)
Q Consensus 109 ~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~i~~~~~-~~~l~~~~~d-------g~ 172 (290)
.|..|+++|.. ..++++...+-|...+- .++.-..+..+ ...|.+|+++|. .+.++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 79999999864 45666665566666542 33332223221 235899999984 3344433321 12
Q ss_pred EEEEEC-CcccEEEeee-cC--------CCCeEEEEEcCC-CCEEEEEeCC
Q 022910 173 VWMWNA-DRAAYLNMFS-GH--------GSSVTCGDFTPD-GKTICTGSDD 212 (290)
Q Consensus 173 i~i~d~-~~~~~~~~~~-~~--------~~~i~~~~~~~~-~~~l~~~~~d 212 (290)
..||.. ..++.-..+. .. ...+..|+++|. .+.++++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 344443 3332211111 11 012467889984 4667777633
No 384
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=49.37 E-value=1.1e+02 Score=24.98 Aligned_cols=192 Identities=14% Similarity=0.161 Sum_probs=102.4
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCCe-----------eeeeeccc-cCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------WASEIQGH-KDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.+..++.+. +....+.-..+|.|+.|-..... ....+... ...|..++. ...+.++...+|.|+.
T Consensus 106 ~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~ 182 (389)
T 3kci_A 106 FIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYT 182 (389)
T ss_dssp CEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred ceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEE
Confidence 455566665 55555555778999999654310 11111111 225666665 3456666677899999
Q ss_pred EcCCCC-c--------e--EEEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-c----------EEEeeec-
Q 022910 134 WDPSSG-N--------L--KCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-A----------YLNMFSG- 189 (290)
Q Consensus 134 ~d~~~~-~--------~--~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~~- 189 (290)
|=.... + . ...+.. ....|..++......+.++-..+|.|+.|-.... + ....+..
T Consensus 183 wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred eCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 964321 1 0 111111 2235666665443356666778899999965421 0 1111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCC---------e--eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCC
Q 022910 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG---------E--NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (290)
Q Consensus 190 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (290)
....|..++.. ....++-..+|.|+.|=.... . ....+.. .....|..++.. ....++-..+|
T Consensus 263 ~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~--l~~~~v~~ia~G--~~h~~al~~~G 336 (389)
T 3kci_A 263 TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATG--SLHCVCCTEDG 336 (389)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG--GTTCCEEEEEEC--SSEEEEEETTC
T ss_pred CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEecc--CCCCCEEEEEec--cCeEEEECCCC
Confidence 22346666553 344555578899999965321 1 1111221 122346666653 33444557889
Q ss_pred cEEEEEcC
Q 022910 259 SVHMVNIT 266 (290)
Q Consensus 259 ~i~~wd~~ 266 (290)
.|+.|=..
T Consensus 337 ~v~~wG~n 344 (389)
T 3kci_A 337 EVYTWGDN 344 (389)
T ss_dssp CEEEEECC
T ss_pred CEEEeeCC
Confidence 99999654
No 385
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=48.80 E-value=85 Score=27.16 Aligned_cols=67 Identities=19% Similarity=0.160 Sum_probs=43.4
Q ss_pred CEEEEEEcCC--CCEEEEeeCCCeEEEEECCccc----EEEeee--cCCCCeE-EEEEcCCCCEEEEEeCCCeEEE
Q 022910 151 GVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA----YLNMFS--GHGSSVT-CGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 151 ~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~----~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 217 (290)
.+++|+.... ...++.|+.+|.|.-.-+.... .+..+. ....+|. .|.++++..+|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3566665543 3468889999987766554321 222222 2246775 8999999999999987765555
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=48.44 E-value=69 Score=27.35 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=41.8
Q ss_pred eEEEEEcC----CC--CEEEEEeCCCeEEEEcCC-CCe-------eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCc
Q 022910 194 VTCGDFTP----DG--KTICTGSDDATLRVWNPK-SGE-------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (290)
Q Consensus 194 i~~~~~~~----~~--~~l~~~~~dg~i~i~d~~-~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (290)
.++|+... ++ ..++.|+.+|.|.-.-+. .+. .+..+...+ ...+|..|.++++..+|++++..+.
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~-~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSS-SCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecC-CCCccceEEEcCCCCEEEEEECCeE
Confidence 46665543 13 346788999987544332 211 222333221 3578899999999999999988775
Q ss_pred EEE
Q 022910 260 VHM 262 (290)
Q Consensus 260 i~~ 262 (290)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 387
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=46.41 E-value=1.2e+02 Score=24.68 Aligned_cols=193 Identities=13% Similarity=0.109 Sum_probs=101.8
Q ss_pred CEEEEEECCCCCcEEEEecCCCcEEEEEccCC-e----------eeeeecc-ccCCEEEEEECCCCCEEEEEeCCCcEEE
Q 022910 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQG-D----------WASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (290)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (290)
.|..++. +....+.-..+|.|..|-.... + ....+.. ....+..++++....+.+....+|.|+.
T Consensus 54 ~i~~i~~---G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~ 130 (389)
T 3kci_A 54 RPVQLIG---GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 130 (389)
T ss_dssp CEEEEEE---ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEE
T ss_pred ceEEEEe---CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEE
Confidence 4555554 3334444467899999965431 0 1111111 2234566777767777777788999999
Q ss_pred EcCCCC--------c---eEEEEec-CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-c----------EEEeee-c
Q 022910 134 WDPSSG--------N---LKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-A----------YLNMFS-G 189 (290)
Q Consensus 134 ~d~~~~--------~---~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~-~ 189 (290)
|-.... . ....+.. ....|..++.. ..+.++...+|.|+.|-.... + ....+. .
T Consensus 131 wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~ 208 (389)
T 3kci_A 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 208 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG
T ss_pred EeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc
Confidence 954321 0 1111111 12246666553 445666677899999975431 1 111111 1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCe---------eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcE
Q 022910 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE---------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSV 260 (290)
Q Consensus 190 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 260 (290)
....|..++........++-..+|.|+.|-..... ..............|..++... .+.++-..+|.|
T Consensus 209 ~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v 286 (389)
T 3kci_A 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAV 286 (389)
T ss_dssp TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCE
T ss_pred CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeE
Confidence 23456777665433566677789999999543210 1111111111223466655532 344444678888
Q ss_pred EEEEc
Q 022910 261 HMVNI 265 (290)
Q Consensus 261 ~~wd~ 265 (290)
+.|=.
T Consensus 287 ~~wG~ 291 (389)
T 3kci_A 287 YTWGK 291 (389)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88864
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=44.43 E-value=72 Score=27.60 Aligned_cols=69 Identities=7% Similarity=0.013 Sum_probs=42.2
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCeEEEEcCCCC----eeeEEEeCCCCcccCeE-EEEEcCCCCEEEEEeCCCcEEE
Q 022910 193 SVTCGDFTPD--GKTICTGSDDATLRVWNPKSG----ENIHVIRGHPYHTEGLT-CLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 193 ~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
.+++|+.... -..++.|+.+|.|.-.-+... ..+..+.... ...+|. .|.+++++.+|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccccee
Confidence 3555555442 345678999998776544322 1223333221 245674 8999999999999987755444
No 389
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=42.76 E-value=1.4e+02 Score=24.50 Aligned_cols=189 Identities=11% Similarity=0.008 Sum_probs=97.1
Q ss_pred cCEEEEEECCCCCcEEEEecCCCcEEEEEc--cC-Ceee---------eeeccccCCEEEEEECCCCCEEEEEeCCCcEE
Q 022910 65 DEVYSVACSPTDATLVATGGGDDKGFFWRI--NQ-GDWA---------SEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (290)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~--~~-~~~~---------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (290)
..|..|+... ...+.-..+|.|+.|-. .. +++- .........|..|+. ...+.+....+|.|+
T Consensus 127 ~~i~~va~G~---~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~--G~~hs~alt~~G~v~ 201 (423)
T 3mvd_K 127 GKALCISAGD---SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS--GADHLVILTTAGKVF 201 (423)
T ss_dssp SCEEEEEECS---SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CCEEEEEcCc---CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEec--CCCeEEEEecCCeEE
Confidence 4677777643 33344467899999985 22 2210 001112345666665 344566667789999
Q ss_pred EEcCCCC-----------------------ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc--------
Q 022910 133 IWDPSSG-----------------------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-------- 181 (290)
Q Consensus 133 i~d~~~~-----------------------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-------- 181 (290)
.|=.... .+..........|..++... ...++.-..+|.|+.|-....
T Consensus 202 ~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~ 280 (423)
T 3mvd_K 202 TVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETK 280 (423)
T ss_dssp EEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCT
T ss_pred EeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCC
Confidence 9953321 11111111223456655442 223333357888999864321
Q ss_pred ---cEEEeeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCC------------eeeEEEeCCCCcccCeEEEEEcC
Q 022910 182 ---AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG------------ENIHVIRGHPYHTEGLTCLTISA 246 (290)
Q Consensus 182 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~~~~v~~~~~~~ 246 (290)
............|..|+.. ....++-..+|.|+.|=.... .....+.. ....|..++...
T Consensus 281 ~~~~~~~p~~~~~~~v~~ia~G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~---l~~~v~~ia~G~ 355 (423)
T 3mvd_K 281 GKEFALTPIKTELKDIRHIAGG--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKK---LTEKIVSVGCGE 355 (423)
T ss_dssp TCSEEEEEEEECCCSEEEEEEC--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTT---CCSCEEEEEEET
T ss_pred CCceeeeeEEcCCCCeEEEEcc--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEecc---CCCCEEEEEcCC
Confidence 0111111113456666553 345556678899999954321 11122221 222576766543
Q ss_pred CCCEEEEEeCCCcEEEEEcC
Q 022910 247 DSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 247 ~~~~l~~~~~dg~i~~wd~~ 266 (290)
. ..++-..+|.|+.|=..
T Consensus 356 ~--hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 356 V--CSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp T--EEEEEETTSCEEEEECC
T ss_pred C--eEEEEcCCCCEEEECCC
Confidence 2 33344678999999654
No 390
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=41.72 E-value=1.4e+02 Score=24.28 Aligned_cols=157 Identities=12% Similarity=0.044 Sum_probs=82.6
Q ss_pred cCCEEEEEEC---CCCCEEEEEeCCCcEEEEcCCCCc-------eEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEE
Q 022910 107 KDSVSSLAFS---MDGQLLASGGLDGLVQIWDPSSGN-------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMW 176 (290)
Q Consensus 107 ~~~i~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 176 (290)
...|.++... ..+.+|+.++..|.++...+.... ....++. ...+-.+........++..+..|.+..+
T Consensus 98 ~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf 176 (370)
T 3l6v_A 98 GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRF 176 (370)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEE
Confidence 3455555432 245689999999999988754321 1122322 3345555554455678888888998888
Q ss_pred ECCcccE-------EEeee-cCCCCeEEEEEcC-----------------------------------CCCEEEEEeCCC
Q 022910 177 NADRAAY-------LNMFS-GHGSSVTCGDFTP-----------------------------------DGKTICTGSDDA 213 (290)
Q Consensus 177 d~~~~~~-------~~~~~-~~~~~i~~~~~~~-----------------------------------~~~~l~~~~~dg 213 (290)
....-.. ++-+. .....|.++...+ .+..+++.+..|
T Consensus 177 ~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G 256 (370)
T 3l6v_A 177 GESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENG 256 (370)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------------CEEEEEETTS
T ss_pred EccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCC
Confidence 7643211 11111 1234455554443 345788888999
Q ss_pred eEEEEcCCCC-------eeeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 022910 214 TLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (290)
Q Consensus 214 ~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 265 (290)
..+...+... +-+..++... ....+..+.+..+...++..+..|.+.-..+
T Consensus 257 ~gKrt~~~e~~~~~Rg~kGv~~~k~~~-~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v 314 (370)
T 3l6v_A 257 YGKRTPLAEYPRKGRGTQGVIGIQTTE-RNGKLVRAVLLGSTDEVMLISDGGTLVRTRG 314 (370)
T ss_dssp EEEEEEGGGSCCBCTTSCCEESSCCCT-TTCSEEEEEEECTTCEEEEEETTCCEEEEEG
T ss_pred CEEEEEHHHhcccccCCcceEEEEecC-CCCcEEEEEEeCCCceEEEEcCCCeEEEeeH
Confidence 8887765321 1122222111 2234444433333344555566666655554
No 391
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=41.51 E-value=1.3e+02 Score=23.68 Aligned_cols=157 Identities=10% Similarity=0.022 Sum_probs=87.7
Q ss_pred cCCEEEEEEC---CCCCEEEEEeCCCcEEEEcCCCC-------ceEEEEecCCCCEEEEEEcCCCCEEEEeeCCCeEEEE
Q 022910 107 KDSVSSLAFS---MDGQLLASGGLDGLVQIWDPSSG-------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMW 176 (290)
Q Consensus 107 ~~~i~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 176 (290)
...|..+... .++.+++..+..|.++...+... .....+... ..+..+........++..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 94 DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRF 172 (307)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEE
Confidence 3456555432 34567889999999998866421 111123333 445555555455678888888998888
Q ss_pred ECCcccE-------EE--eeecCCCCeEEEEEcCCCCEEEEEeCCCeEEEEcCCCCe-------eeEEEeCCCCcccCeE
Q 022910 177 NADRAAY-------LN--MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE-------NIHVIRGHPYHTEGLT 240 (290)
Q Consensus 177 d~~~~~~-------~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~~~~v~ 240 (290)
....-.. ++ .+. ....|.++...+++..+++.+..|.++...+.... -+..+.. ......+.
T Consensus 173 ~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~-~~~~~~lv 250 (307)
T 1zi0_A 173 KESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKV-TERNGLVV 250 (307)
T ss_dssp EGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCC-CTTTCSEE
T ss_pred EHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEe-cCCCCeEE
Confidence 7643211 11 122 23456666555556678888999998887663211 1111111 11224444
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcC
Q 022910 241 CLTISADSTLALSGSKDGSVHMVNIT 266 (290)
Q Consensus 241 ~~~~~~~~~~l~~~~~dg~i~~wd~~ 266 (290)
.+....+...|+..+.+|.+..+.+.
T Consensus 251 ~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 251 GAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp EEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred EEEEeCCCceEEEEcCCCcEEEEecc
Confidence 44443334445566677777666654
No 392
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=38.55 E-value=1.5e+02 Score=25.81 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=44.2
Q ss_pred CEEEEEEcC----C--CCEEEEeeCCCeEEEEECCcc--------cEEEeeec-----------CCCCeEEEEEcCCCCE
Q 022910 151 GVEWVSWHP----R--GHIVLAGSEDSTVWMWNADRA--------AYLNMFSG-----------HGSSVTCGDFTPDGKT 205 (290)
Q Consensus 151 ~i~~i~~~~----~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~-----------~~~~i~~~~~~~~~~~ 205 (290)
..+.|+... + ...++.|+.+|.|.-.-+... ..+..+.. ...+|..|.+++....
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 467777764 1 347888999999753322211 12222221 2467889999999999
Q ss_pred EEEEeCCCeEEEE
Q 022910 206 ICTGSDDATLRVW 218 (290)
Q Consensus 206 l~~~~~dg~i~i~ 218 (290)
|++++..+.++|-
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9999988877764
No 393
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=37.65 E-value=1.5e+02 Score=26.41 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=36.5
Q ss_pred EEEEEeCCCeEEEE-cCCCCe-eeEEEeCCCCcccCeEEEEEcCCC--CEEEEEeCCCcEEE
Q 022910 205 TICTGSDDATLRVW-NPKSGE-NIHVIRGHPYHTEGLTCLTISADS--TLALSGSKDGSVHM 262 (290)
Q Consensus 205 ~l~~~~~dg~i~i~-d~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~ 262 (290)
.++.|+.+|.|.-. ...... .+..+.... ...+|..|.+++.. .+|++++..+.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~-~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQ-DFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCT-TCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccC-CCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67789999987543 333322 222233222 35678899999987 89998887765544
No 394
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=35.55 E-value=1.2e+02 Score=27.01 Aligned_cols=58 Identities=12% Similarity=0.178 Sum_probs=36.3
Q ss_pred CEEEEEeCCCeEEEE-cCCCCe-------eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 022910 204 KTICTGSDDATLRVW-NPKSGE-------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 204 ~~l~~~~~dg~i~i~-d~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
..++.|+.+|.|.-. -..... .+..+.... ...+|..|.++++...|++++..+.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~-~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSS-SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecC-CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 356789999987532 211111 122222222 4667899999999999999988775554
No 395
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.25 E-value=1.5e+02 Score=26.08 Aligned_cols=58 Identities=12% Similarity=0.145 Sum_probs=36.5
Q ss_pred CEEEEEeCCCeEEEEcCCCCe------eeEEEeCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 022910 204 KTICTGSDDATLRVWNPKSGE------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
..++.|+.+|.|.-.-..... .+..+.... ...+|..|.++++...|++++..+.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~-~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFR-RAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCS-SCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccC-CCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 356788999987644332211 122232211 3567899999999889998887765554
No 396
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.24 E-value=1.5e+02 Score=26.04 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=38.0
Q ss_pred CEEEEeeCCCeEEEEECCc-c----c-EEEeee--cCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 022910 162 HIVLAGSEDSTVWMWNADR-A----A-YLNMFS--GHGSSVTCGDFTPDGKTICTGSDDATLRVW 218 (290)
Q Consensus 162 ~~l~~~~~dg~i~i~d~~~-~----~-~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 218 (290)
..++.|+.+|.|.-.-+.. . . .+..+. ....+|..|.+++....|++++..+.++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 4677888899876544332 2 1 122222 245688999999998999998877766653
No 397
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=33.62 E-value=2.7e+02 Score=25.17 Aligned_cols=151 Identities=13% Similarity=0.064 Sum_probs=73.0
Q ss_pred ccCCEEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceEEEEec------------CCCCEEEEEEcCC-CCEEEEeeCC-
Q 022910 106 HKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEG------------PGGGVEWVSWHPR-GHIVLAGSED- 170 (290)
Q Consensus 106 ~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------~~~~i~~i~~~~~-~~~l~~~~~d- 170 (290)
-.+.|.+|.++|.+ ..++++...|-|.... ..++.-..+.. ....+.+++++|. ...++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 45689999999976 4566666556554443 23332222221 1235899999883 3334333221
Q ss_pred ----CeEEEEE-CCcccEEEeeec-C------CC--CeEEEEEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCCC-
Q 022910 171 ----STVWMWN-ADRAAYLNMFSG-H------GS--SVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPY- 234 (290)
Q Consensus 171 ----g~i~i~d-~~~~~~~~~~~~-~------~~--~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 234 (290)
....||. ...++.-..+.. . .. ....|+++|. ...++++...+.|. .....++.-..+.....
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECTTSCCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccccCccc
Confidence 1123332 333322111110 0 11 1146888874 45566665544333 22233443333332111
Q ss_pred --cccCeEEEEEcCC-CCEEEEEeCCC
Q 022910 235 --HTEGLTCLTISAD-STLALSGSKDG 258 (290)
Q Consensus 235 --~~~~v~~~~~~~~-~~~l~~~~~dg 258 (290)
....+..++++|. ...++++..++
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1235788899884 34455555554
No 398
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=32.16 E-value=1.7e+02 Score=22.30 Aligned_cols=140 Identities=10% Similarity=-0.019 Sum_probs=76.4
Q ss_pred EEEEecCCCcEEEEEccCCee-eeeeccccCCEEEEEECCCCCEEEEEeCCCcEEEE---cCCCC----ceE---EEEec
Q 022910 79 LVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSG----NLK---CTLEG 147 (290)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~----~~~---~~~~~ 147 (290)
.+++.+.+|.|+--....... ...++... .+..+........|+..+..|.++-+ ++... .++ ..+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 445667777776655432111 11233333 34444333344456666777876654 44222 111 1122
Q ss_pred CCCCEEEEEEcCCCCEEEEeeCCCeEEEEECCcc-------cEEEeeecCCCCeEEEEEc-CCCCEEEEEeCCCeEEEEc
Q 022910 148 PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-------AYLNMFSGHGSSVTCGDFT-PDGKTICTGSDDATLRVWN 219 (290)
Q Consensus 148 ~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d 219 (290)
....|.++....++.+|+.++..|.++...+... .....+.. ...+..+... .....++..+..|.+..+.
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~ 160 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFP 160 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEE
Confidence 2345666644345667888999999999987432 22233332 2344444454 3456788888999988887
Q ss_pred CC
Q 022910 220 PK 221 (290)
Q Consensus 220 ~~ 221 (290)
..
T Consensus 161 ~~ 162 (256)
T 1zvt_A 161 VS 162 (256)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 399
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.11 E-value=1.3e+02 Score=26.81 Aligned_cols=56 Identities=11% Similarity=0.287 Sum_probs=36.9
Q ss_pred CEEEEeeCCCeEEE-EECCccc-------EEEeee--cCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 022910 162 HIVLAGSEDSTVWM-WNADRAA-------YLNMFS--GHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (290)
Q Consensus 162 ~~l~~~~~dg~i~i-~d~~~~~-------~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 217 (290)
..++.|+.+|.|.- .-..... .+..+. ....+|..|.+++....|++++..+.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 36778889998653 3222211 122222 35678999999999999999998886655
No 400
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=29.52 E-value=2.4e+02 Score=24.37 Aligned_cols=67 Identities=9% Similarity=-0.022 Sum_probs=41.6
Q ss_pred eEEEEEcC--CCCEEEEEeCCCeEEEEcCC-CC--eeeEEEeCCCCcccCe-EEEEEcCCCCEEEEEeCCCcEEE
Q 022910 194 VTCGDFTP--DGKTICTGSDDATLRVWNPK-SG--ENIHVIRGHPYHTEGL-TCLTISADSTLALSGSKDGSVHM 262 (290)
Q Consensus 194 i~~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~--~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~ 262 (290)
.+.|+... .-..++.|+.+|.|.-.-+. .. ..+..+.. . ...+| ..|.+++...+|++++..+.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~-~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-Q-QGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-S-TTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-C-CCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45555543 22456678999988754432 21 22334432 1 34567 48899999999999988776665
No 401
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=28.60 E-value=2.5e+02 Score=24.48 Aligned_cols=79 Identities=9% Similarity=0.035 Sum_probs=46.7
Q ss_pred ceeeeccCCcCEEEEEECCC-----CCcEEEEecCCCcEEEEEccCC--------eeeeeecc-----------ccCCEE
Q 022910 56 STHIFSGHSDEVYSVACSPT-----DATLVATGGGDDKGFFWRINQG--------DWASEIQG-----------HKDSVS 111 (290)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~-----------~~~~i~ 111 (290)
|+....+..-..+.|+.... .-..++.|+.+|.|.-.-+... ..+..+.. ...+|.
T Consensus 394 Pll~~~~~~y~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~ 473 (565)
T 3oky_B 394 PWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIM 473 (565)
T ss_dssp CSEEECSSSSCEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCC
T ss_pred eEEEEcCCccceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceE
Confidence 33333333334677776641 1246778899998753322211 12222211 146788
Q ss_pred EEEECCCCCEEEEEeCCCcEEEE
Q 022910 112 SLAFSMDGQLLASGGLDGLVQIW 134 (290)
Q Consensus 112 ~~~~~~~~~~l~~~~~dg~i~i~ 134 (290)
.|.+++...+|++++..+.++|-
T Consensus 474 ~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 474 GMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp EEEEEGGGTEEEEECSSCEEEEE
T ss_pred EEEEcCCCCEEEEEecCeEEEee
Confidence 99999998999999988776664
No 402
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=27.01 E-value=3.6e+02 Score=24.50 Aligned_cols=152 Identities=11% Similarity=0.125 Sum_probs=77.6
Q ss_pred cCCEEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceEEEEecC-------CCCEEEEEEcCCC-CEEEEeeCCCe----E
Q 022910 107 KDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEGP-------GGGVEWVSWHPRG-HIVLAGSEDST----V 173 (290)
Q Consensus 107 ~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~i~~~~~~-~~l~~~~~dg~----i 173 (290)
.+.|.+|+++|.. ..+++++..+-|...+ ..++.-..+... ...+.+|+++|.. ..++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 4689999999863 4566666666665554 334333333221 2369999999843 34444432211 2
Q ss_pred EEE-ECCcccEEEeeec---------CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEcCCCCeeeEEEeCCC---CcccCe
Q 022910 174 WMW-NADRAAYLNMFSG---------HGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHP---YHTEGL 239 (290)
Q Consensus 174 ~i~-d~~~~~~~~~~~~---------~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~v 239 (290)
.|| ....++.-..+.. ....+..++++|. .+.++++...+.|. .....++.-..+.... .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCe
Confidence 233 2333332222211 0113556888874 45666666444332 2222344434433211 112467
Q ss_pred EEEEEcC-CCCEEEEEeCC-CcE
Q 022910 240 TCLTISA-DSTLALSGSKD-GSV 260 (290)
Q Consensus 240 ~~~~~~~-~~~~l~~~~~d-g~i 260 (290)
..+.++| ++..|+++..+ +.|
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp EEEEECTTSTTCEEEEESSTTCE
T ss_pred EEEEECCCCCCEEEEEEcCCCeE
Confidence 8899988 44566666554 444
No 403
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.03 E-value=3.3e+02 Score=23.80 Aligned_cols=180 Identities=15% Similarity=0.198 Sum_probs=94.7
Q ss_pred cEEEEEccCCeeeeeec--------cccCCEEEEEECCCCC-EEEEEeCCCc----------------------------
Q 022910 88 KGFFWRINQGDWASEIQ--------GHKDSVSSLAFSMDGQ-LLASGGLDGL---------------------------- 130 (290)
Q Consensus 88 ~i~iw~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~-~l~~~~~dg~---------------------------- 130 (290)
.|.+|++. ++.+..+. .|-..+....|.-+|+ -|++.+.+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 46666664 44444332 1444566667777776 4666665665
Q ss_pred EEEEcCCCCceEEEEecC--CCC---------------EEEEEEc-CCCCEEEEee---CCCeEEEEECCcccEEEeeec
Q 022910 131 VQIWDPSSGNLKCTLEGP--GGG---------------VEWVSWH-PRGHIVLAGS---EDSTVWMWNADRAAYLNMFSG 189 (290)
Q Consensus 131 i~i~d~~~~~~~~~~~~~--~~~---------------i~~i~~~-~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~ 189 (290)
|.+++-.+++.+.++... .+. ..++++- -+...++.+- ....|..||.+.+++...+..
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 778887788777665432 111 2233331 1222333332 223588899877765443321
Q ss_pred CC-------------CCeEEEEEcCCCC-EEEEEeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEEEcCC--CCEEEE
Q 022910 190 HG-------------SSVTCGDFTPDGK-TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD--STLALS 253 (290)
Q Consensus 190 ~~-------------~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~ 253 (290)
.. ..+....+.-+|+ -|+.|+. ++| ..++.+..... .|...+....|.|+ |.-++.
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD-~dG~~L~st~~--gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVD-HDGKGMYSTGL--GHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EEC-TTSCEEEECSC--CCCSCEEEECCCTTSSSCEEEE
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EEC-CCCCEeeeCCC--CCCCeeEEeecCCCCCCcEEEE
Confidence 11 1233334444442 2333221 223 23333333322 37777888888886 345666
Q ss_pred EeCCC----cEEEEEcCCCcEEEEEcc
Q 022910 254 GSKDG----SVHMVNITTGKVVSSLVS 276 (290)
Q Consensus 254 ~~~dg----~i~~wd~~~~~~~~~~~~ 276 (290)
+..++ -..+.|..+|+.+.....
T Consensus 383 ~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 383 VHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp ECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred EecCCCCCCccEEEECCCCcEEEEcCC
Confidence 55541 355689999999988764
No 404
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=25.51 E-value=98 Score=22.35 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=30.6
Q ss_pred cCCcCEEEEEECCCCCcEEEEecCCCcEEEEEccCCeeee
Q 022910 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS 101 (290)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 101 (290)
.+++-+.++.|......-+++...++++.+||.+-|+...
T Consensus 116 ~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v 155 (188)
T 1ukf_A 116 SGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQS 155 (188)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEE
T ss_pred CCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeec
Confidence 3466677888887555778888889999999998876543
No 405
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=25.31 E-value=1.4e+02 Score=21.93 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=0.0
Q ss_pred EEeeCCCeEEEEECCcccEEEeeecCCCCeEEEEEcCCCCEEEE-EeCCCeEEEEcCCCCeeeEEEeCCCCcccCeEEEE
Q 022910 165 LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLT 243 (290)
Q Consensus 165 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~ 243 (290)
+-+-....|.+|.+..+.-+--+.... +..|.....+-+. ...+|.|++-+.+++.++.... .......+.
T Consensus 63 im~~ng~~lt~Wa~~~~nw~wgY~~~d----s~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~----nGvv~~~C~ 134 (206)
T 1sr4_A 63 LMGQNGALLTVWALAKRNWLWAYPNIY----SQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYG----NGLIHDICS 134 (206)
T ss_dssp EEETTSEEEEECSCSTTCBEEEEEGGG----CGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEET----TEEEEECCC
T ss_pred EEcCCCCEEEEEecCCCcceeeecccc----cCCcCCcceeEEEeecCCCEEEEEECCCCceeeecc----CCeEEecCC
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEcCCCcEEEE
Q 022910 244 ISA-DSTLALSGSKDGSVHMVNITTGKVVSS 273 (290)
Q Consensus 244 ~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~ 273 (290)
-+. ...+=+.-+..|.|.|=++.+++|+..
T Consensus 135 ~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t 165 (206)
T 1sr4_A 135 LDKLAQEFELLPTDSGAVVIKSVSQGRCVTY 165 (206)
T ss_dssp TTCGGGCEEEEEBTTSCEEEEETTTCCEEEE
T ss_pred CCCcccEEEEecCCCccEEEEECCCCccCCc
No 406
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.15 E-value=3.2e+02 Score=24.36 Aligned_cols=67 Identities=7% Similarity=0.127 Sum_probs=43.0
Q ss_pred CEEEEEEc----CCC---CEEEEeeCCCeEEEE-ECCccc-EEEeee--cCCCCeEEEEEcCCC--CEEEEEeCCCeEEE
Q 022910 151 GVEWVSWH----PRG---HIVLAGSEDSTVWMW-NADRAA-YLNMFS--GHGSSVTCGDFTPDG--KTICTGSDDATLRV 217 (290)
Q Consensus 151 ~i~~i~~~----~~~---~~l~~~~~dg~i~i~-d~~~~~-~~~~~~--~~~~~i~~~~~~~~~--~~l~~~~~dg~i~i 217 (290)
..++|+.. .++ ..++.|+.+|.|.-. ...... .+..+. ....+|..|.+++.. .+|++++..+.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 35666653 233 378889999987543 443322 222222 245688899999987 89999988876655
No 407
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=21.33 E-value=3e+02 Score=23.71 Aligned_cols=68 Identities=15% Similarity=0.053 Sum_probs=43.7
Q ss_pred CEEEEEEcC--CCCEEEEeeCCCeEEEEECC-cc--cEEEeee-cCCCCe-EEEEEcCCCCEEEEEeCCCeEEEE
Q 022910 151 GVEWVSWHP--RGHIVLAGSEDSTVWMWNAD-RA--AYLNMFS-GHGSSV-TCGDFTPDGKTICTGSDDATLRVW 218 (290)
Q Consensus 151 ~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~-~~--~~~~~~~-~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~ 218 (290)
..++|+... ....++.|+.+|.|.-.-+. .. ..+..+. ....+| ..|.+++....|++++..+.++|-
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 466666543 23467778899998755543 21 1122221 345577 489999999999999888877664
Done!