Your job contains 1 sequence.
>022914
MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV
RSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY
GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVE
AMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG
DSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQQP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022914
(290 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080933 - symbol:MUR1 "MURUS 1" species:3702 "... 1414 1.1e-144 1
TAIR|locus:2155036 - symbol:GMD1 ""GDP-D-mannose 4,6-dehy... 1410 2.8e-144 1
UNIPROTKB|P72586 - symbol:rfbD "GDP-D-mannose dehydratase... 936 4.8e-94 1
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 727 6.3e-89 2
UNIPROTKB|P71790 - symbol:gmdA "GDP-D-mannose dehydratase... 856 1.4e-85 1
TIGR_CMR|CBU_0689 - symbol:CBU_0689 "GDP-mannose 4,6-dehy... 842 4.4e-84 1
ZFIN|ZDB-GENE-050419-45 - symbol:gmds "GDP-mannose 4,6-de... 664 5.1e-83 2
UNIPROTKB|P0AC88 - symbol:gmd "GDP-mannose 4,6-dehydratas... 681 3.6e-82 2
TIGR_CMR|CPS_4199 - symbol:CPS_4199 "GDP-mannose 4,6-dehy... 687 7.4e-82 2
UNIPROTKB|F1P299 - symbol:GMDS "Uncharacterized protein" ... 664 5.1e-81 2
UNIPROTKB|F6W683 - symbol:GMDS "Uncharacterized protein" ... 653 1.7e-80 2
UNIPROTKB|F1RX12 - symbol:GMDS "Uncharacterized protein" ... 654 2.2e-80 2
UNIPROTKB|Q06952 - symbol:rfbD "Probable GDP-mannose 4,6-... 678 2.8e-80 2
TIGR_CMR|VC_0243 - symbol:VC_0243 "GDP-mannose 4,6-dehydr... 678 2.8e-80 2
FB|FBgn0031661 - symbol:Gmd "GDP-mannose 4,6-dehydratase"... 682 7.4e-80 2
UNIPROTKB|B5XE59 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 659 7.4e-80 2
UNIPROTKB|Q8K3X3 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 653 9.5e-80 2
MGI|MGI:1891112 - symbol:Gmds "GDP-mannose 4, 6-dehydrata... 653 9.5e-80 2
RGD|1311008 - symbol:Gmds "GDP-mannose 4, 6-dehydratase" ... 653 9.5e-80 2
UNIPROTKB|F6W0W9 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 654 1.5e-79 2
UNIPROTKB|E9PI88 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 653 2.0e-79 2
UNIPROTKB|O60547 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 653 2.0e-79 2
UNIPROTKB|Q6P621 - symbol:gmds "GDP-mannose 4,6-dehydrata... 652 2.5e-79 2
UNIPROTKB|F7EWI9 - symbol:GMDS "Uncharacterized protein" ... 653 3.2e-79 2
DICTYBASE|DDB_G0284553 - symbol:gmd "GDP-mannose dehydrat... 673 4.1e-79 2
UNIPROTKB|Q8AVI1 - symbol:gmds "Gmds-prov protein" specie... 653 6.6e-79 2
WB|WBGene00000266 - symbol:bre-1 species:6239 "Caenorhabd... 760 2.1e-75 1
UNIPROTKB|Q18801 - symbol:bre-1 "GDP-mannose 4,6 dehydrat... 760 2.1e-75 1
WB|WBGene00010166 - symbol:gmd-2 species:6239 "Caenorhabd... 754 9.3e-75 1
UNIPROTKB|O45583 - symbol:gmd-2 "GDP-mannose 4,6 dehydrat... 754 9.3e-75 1
UNIPROTKB|F6Z8R0 - symbol:GMDS "Uncharacterized protein" ... 658 2.0e-69 2
UNIPROTKB|E2RC02 - symbol:GMDS "Uncharacterized protein" ... 653 7.7e-68 2
GENEDB_PFALCIPARUM|PF08_0077 - symbol:PF08_0077 "GDP-mann... 687 1.2e-67 1
UNIPROTKB|Q8IAX4 - symbol:PF08_0077 "GDP-mannose 4,6-dehy... 687 1.2e-67 1
UNIPROTKB|F1MBF1 - symbol:GMDS "Uncharacterized protein" ... 434 7.5e-41 1
TIGR_CMR|CJE_1611 - symbol:CJE_1611 "GDP-mannose 4,6-dehy... 290 1.4e-25 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 285 4.6e-25 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 251 1.9e-21 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 234 1.2e-19 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 229 4.8e-19 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 227 8.4e-19 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 214 2.2e-17 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 208 9.8e-16 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 201 9.4e-15 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 200 2.3e-14 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 177 3.5e-14 2
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 197 3.6e-14 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 193 1.0e-13 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 192 2.7e-13 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 192 2.9e-13 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 192 2.9e-13 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 186 1.5e-12 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 183 4.1e-12 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 176 2.3e-11 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 171 1.1e-10 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 168 2.0e-10 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 169 2.1e-10 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 161 1.5e-09 1
UNIPROTKB|Q4K5C5 - symbol:PFL_5490 "NAD dependent epimera... 157 3.9e-09 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 156 6.3e-09 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 155 8.5e-09 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 153 1.6e-08 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 98 4.5e-08 2
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 147 8.7e-08 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 144 1.8e-07 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 143 2.4e-07 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 142 2.9e-07 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 142 3.0e-07 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 140 5.3e-07 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 139 6.9e-07 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 137 9.4e-07 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 136 1.4e-06 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 136 1.4e-06 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 134 2.6e-06 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 129 1.5e-05 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 122 5.2e-05 1
POMBASE|SPBPB2B2.11 - symbol:SPBPB2B2.11 "nucleotide-suga... 107 9.5e-05 2
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 118 0.00016 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 117 0.00021 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 116 0.00023 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 116 0.00031 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 116 0.00039 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 116 0.00039 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 116 0.00039 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 116 0.00039 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 114 0.00045 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 114 0.00045 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 112 0.00078 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 112 0.00078 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 113 0.00085 1
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
Identities = 262/290 (90%), Positives = 283/290 (97%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHYADLTDASSLRRW+D I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV
Sbjct: 85 MKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 144
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
RSH DSGR+ ++YYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY
Sbjct: 145 RSHTIDSGRT-VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 203
Query: 121 GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVE 180
GLFACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGNLQASRDWGFAGDYVE
Sbjct: 204 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 263
Query: 181 AMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG 240
AMW+MLQQEKPDDYVVATEE HTVEEFL+V+FGY+GLNWKD+V ID+RYFRPAEVDNL+G
Sbjct: 264 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 323
Query: 241 DSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQQP 290
D+SKA++VLGWKP+VGFE+LVKMMVDED+ELAKREKVLVDAGYMDA+QQP
Sbjct: 324 DASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAKQQP 373
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 261/290 (90%), Positives = 281/290 (96%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DL+DASSLRRWLD I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV
Sbjct: 73 MKLHYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 132
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
RSH D+GR+ I+YYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY
Sbjct: 133 RSHNIDNGRA-IKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 191
Query: 121 GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVE 180
GL+ACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGN+QASRDWGFAGDYVE
Sbjct: 192 GLYACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVE 251
Query: 181 AMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG 240
AMW+MLQQEKPDDYVVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRP EVDNLKG
Sbjct: 252 AMWLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKG 311
Query: 241 DSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQQP 290
D+SKA+++LGWKP+VGFE+LVKMMVDED+ELAKREKVL DAGYMDAQQQP
Sbjct: 312 DASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 173/270 (64%), Positives = 210/270 (77%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
++LHY DLTD ++LRR L+ + P E+YNL AQSHV VSF+ P+YT D VA G LRLLEA+
Sbjct: 60 LRLHYGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAI 119
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREA 119
R + +G +R+YQAGSSEMFG PQ ETTPF+PRSPYA +K HW TVNYRE+
Sbjct: 120 RDYQHRTG-IQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRES 178
Query: 120 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
Y LFACNGILFNHESPRRGE FVTRKITRA+ RI G Q KL+LGN+ + RDWG+A DYV
Sbjct: 179 YDLFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYV 238
Query: 180 EAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLK 239
AMW MLQQE+PDDYVVAT E+H V+EFLE+AFGYV LNW+++V D+RY RPAEVD L
Sbjct: 239 RAMWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLLI 298
Query: 240 GDSSKARKVLGWKPRVGFEQLVKMMVDEDI 269
GD +K + LGW+P V F +LV +MV+ D+
Sbjct: 299 GDPAKTKAQLGWEPSVTFTELVHLMVEADL 328
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 727 (261.0 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 138/221 (62%), Positives = 171/221 (77%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DL DASS+ R L + PDE+YNL AQSHV VSF++P+YT ++ A G +RLLE +R
Sbjct: 59 LHYGDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGIR- 117
Query: 63 HIADSGRSHIRYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
++G + R+YQA SSE++G PQ ETTPF+PRSPYA +K A++ TVNYRE+YG
Sbjct: 118 ---ETGLN-TRFYQASSSELYGKVVETPQKETTPFYPRSPYACAKAYAYYITVNYRESYG 173
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
++ACNGILFNHESPRRGE FVTRKITRA GRIK GLQ +L+LGNL A RDWGFAGDYVEA
Sbjct: 174 MYACNGILFNHESPRRGETFVTRKITRAAGRIKTGLQDRLYLGNLDAKRDWGFAGDYVEA 233
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNWK 220
MW+MLQQ++ DD+VVAT E+ +V EF E F +G L W+
Sbjct: 234 MWLMLQQQEADDFVVATGETWSVREFAERVFARLGMPLEWQ 274
Score = 180 (68.4 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREK 276
+ ID RYFRPAEVD L GD +KAR+ LGW+PRV F+ LV MM D D+ LA+REK
Sbjct: 292 IEIDPRYFRPAEVDLLLGDPAKARRQLGWQPRVDFQGLVDMMTDADLALAEREK 345
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 164/279 (58%), Positives = 206/279 (73%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DL D + L L TI PDEVYNLAAQSHV VSF+ P +T D G++RLLEAVR
Sbjct: 59 LHYGDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRL 118
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGL 122
R H R+YQA SSEMFG++PPPQ+E TPF+PRSPY A+K ++W T NYREAYGL
Sbjct: 119 -----SRVHCRFYQASSSEMFGASPPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGL 173
Query: 123 FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM 182
FA NGILFNHESPRRGE FVTRKITRAV RIK G+QS++++GNL A RDWG+A +YVE M
Sbjct: 174 FAVNGILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGM 233
Query: 183 WMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDS 242
W MLQ ++PDD+V+AT TV EF AF + GL+W+ +V D+RY RP EVD+L GD+
Sbjct: 234 WRMLQTDEPDDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRPTEVDSLIGDA 293
Query: 243 SKARKVLGWKPRVGFEQLVKMMVDEDIELAKRE-KVLVD 280
+KA ++LGW+ V ++L ++MVD D+ + E K +D
Sbjct: 294 TKAAELLGWRASVHTDELARIMVDADMAALECEGKPWID 332
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 155/269 (57%), Positives = 203/269 (75%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY D+TD L + + I P EVYNLAAQSHV VSF+IP YT + + G L +LEA+++
Sbjct: 60 LHYGDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIKN 119
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
AD+ + IR+YQA SSEM+G PQ+E+TPF+PRSPYA +K AH+ T+NYRE+YG
Sbjct: 120 --ADNAKE-IRFYQASSSEMYGDVKSVPQTESTPFNPRSPYACAKVFAHYQTINYRESYG 176
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
L A GILFNHESPRRGE FVTRKIT + +I GL+ K++LGNL+A RDWG+A DYVEA
Sbjct: 177 LHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEA 236
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGD 241
MW+MLQQ+ PDDYV+AT E+ +V+E LE +F V LNW+D VVID +Y+RPAEVD L G+
Sbjct: 237 MWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKYYRPAEVDLLLGE 296
Query: 242 SSKARKVLGWKPRVGFEQLVKMMVDEDIE 270
KA++ LGW+P F +L+K+M++ D +
Sbjct: 297 PKKAKEKLGWQPNTSFHKLIKIMLEHDFK 325
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 664 (238.8 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 126/218 (57%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 85 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 144
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + D+ +R+YQA +SE++G PQ ETTPF+PRSPY A+K A+W +N+RE
Sbjct: 145 KTCGLTDT----VRFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVINFRE 200
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL + RDWG A DY
Sbjct: 201 AYNLFAVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLECFSLGNLDSMRDWGHAKDY 260
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQQE+P D+V+AT E H+V EF+E AF +VG
Sbjct: 261 VEAMWLMLQQEEPVDFVIATGEVHSVREFVERAFKHVG 298
Score = 187 (70.9 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 222 HVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIEL 271
HV +D +Y+RP EVD L+GDSSKA KVLGWKPRV FE+LVK MVD DI+L
Sbjct: 321 HVRVDPKYYRPTEVDYLQGDSSKAFKVLGWKPRVTFEELVKEMVDADIKL 370
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 681 (244.8 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 130/216 (60%), Positives = 165/216 (76%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DL+D S+L R L + PDEVYNL A SHVAVSFE P+YTADV A G LRLLEA+R
Sbjct: 60 LHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR- 118
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
+ ++ R+YQA +SE++G PQ ETTPF+PRSPYA +K A+W TVNYRE+YG
Sbjct: 119 FLGLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 176
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
++ACNGILFNHESPRRGE FVTRKITRA+ I GL+S L+LGN+ + RDWG A DYV+
Sbjct: 177 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM 236
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGL 217
WMMLQQE+P+D+V+AT ++V +F+E+A +G+
Sbjct: 237 QWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGI 272
Score = 162 (62.1 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAG 282
+ +D RYFRPAEV+ L GD +KA + LGWKP + ++V MV D+E AK+ +L G
Sbjct: 305 IAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHG 364
Query: 283 Y 283
Y
Sbjct: 365 Y 365
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 687 (246.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 132/210 (62%), Positives = 161/210 (76%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DLTD+S+L R L + PDEVYNL AQSHVAVSFE P+YTADV A G LRLLEA+R
Sbjct: 62 LHYGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIR- 120
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
+ ++ ++YQA +SE++G PQSETTPFHPRSPYA +K A+W VNYRE+YG
Sbjct: 121 FLGLEKKT--KFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYG 178
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
++ACNGILFNHESPRRGE FVTRKITRA+ I GL+S L+LGN+ A RDWG A DYV
Sbjct: 179 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDALRDWGHAKDYVRM 238
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVA 211
WMMLQQE PDD+V+AT + +V EF+ ++
Sbjct: 239 QWMMLQQEHPDDFVIATGKQISVREFVTLS 268
Score = 153 (58.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAG 282
V +D RYFRPAEV+ L GD SKA++ LGW P++ E++ MV D+ AK+ +L G
Sbjct: 307 VKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQITVEEMCSEMVANDLSKAKQHAILKAHG 366
Query: 283 YMDA 286
Y ++
Sbjct: 367 YQNS 370
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 664 (238.8 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 123/218 (56%), Positives = 165/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P+E+YNL AQSHV +SF++ +YTADV G LRLL+A+
Sbjct: 66 MKLHYGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 125
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE+FG PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 126 KTCGLINS----VKFYQASTSELFGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 181
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 182 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMDSFSLGNLDAKRDWGHARDY 241
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 242 VEAMWLMLQTDEPEDFVIATGEVHSVREFVEKSFKHIG 279
Score = 168 (64.2 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV ++ +Y+RP EVD L+GD +KAR+ L WKPRV F++LV+ MVD D+EL +
Sbjct: 300 KIHVTVNHKYYRPTEVDFLQGDCTKARQKLNWKPRVTFDELVREMVDADVELMR 353
Score = 38 (18.4 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 217 LNWKDHVVIDK--RYFRPAEVDNLKGD 241
LNWK V D+ R A+V+ ++ +
Sbjct: 329 LNWKPRVTFDELVREMVDADVELMRSN 355
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 653 (234.9 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 51 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 110
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 111 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 166
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 167 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 226
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 227 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIG 264
Score = 174 (66.3 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D RY+RP EVD L+GD +KA++ L WKPRV F++LV+ MVD D+EL +
Sbjct: 285 KVHVTVDLRYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVDADVELMR 338
Score = 38 (18.4 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 217 LNWKDHVVIDK--RYFRPAEVDNLKGD 241
LNWK V D+ R A+V+ ++ +
Sbjct: 314 LNWKPRVAFDELVREMVDADVELMRNN 340
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 654 (235.3 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 124/218 (56%), Positives = 162/218 (74%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 58 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117
Query: 61 RSHIADSGR-SHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ G +R+YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 118 KT----CGLIGSVRFYQASTSELYGKVQETPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 173
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 174 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 234 VEAMWLMLQSDEPEDFVIATGEVHSVREFVEKSFLHIG 271
Score = 172 (65.6 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 222 HVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
HV +D +Y+RP EVD L+GD +KA++ L WKPRVGF++LV+ MVD D+EL +
Sbjct: 294 HVRVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVGFDELVREMVDADVELMR 345
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 678 (243.7 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 135/248 (54%), Positives = 178/248 (71%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 61
KLHY DLTD+S+L R L + PDEVYNL AQSHVAVSF+ P+YTADV A G LRLLEA+R
Sbjct: 60 KLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIR 119
Query: 62 SHIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
+ + ++ ++YQA +SE++G PQ ETTPF+PRSPYA +K A+W T+NYRE+Y
Sbjct: 120 -FLGLTKKT--KFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESY 176
Query: 121 GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVE 180
G++ACNGILFNHESPRRGE FVTRKITR + I GL+ LF+GNL A RDWG A DYV+
Sbjct: 177 GIYACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVK 236
Query: 181 AMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG 240
WMMLQQ++P D+V+AT ++V EF++++ +G+ + + K A V ++ G
Sbjct: 237 MQWMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELE---FVGKGVDEKAVVKSVIG 293
Query: 241 DSSKARKV 248
+ A KV
Sbjct: 294 TKAPAIKV 301
Score = 147 (56.8 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAG 282
V +D YFRPAEV+ L GD S A+K LGW P + +Q+V MV D+E A+ +L G
Sbjct: 306 VAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMVASDLEQAQSHALLKKHG 365
Query: 283 Y 283
Y
Sbjct: 366 Y 366
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 678 (243.7 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 135/248 (54%), Positives = 178/248 (71%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 61
KLHY DLTD+S+L R L + PDEVYNL AQSHVAVSF+ P+YTADV A G LRLLEA+R
Sbjct: 60 KLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIR 119
Query: 62 SHIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
+ + ++ ++YQA +SE++G PQ ETTPF+PRSPYA +K A+W T+NYRE+Y
Sbjct: 120 -FLGLTKKT--KFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESY 176
Query: 121 GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVE 180
G++ACNGILFNHESPRRGE FVTRKITR + I GL+ LF+GNL A RDWG A DYV+
Sbjct: 177 GIYACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVK 236
Query: 181 AMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG 240
WMMLQQ++P D+V+AT ++V EF++++ +G+ + + K A V ++ G
Sbjct: 237 MQWMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELE---FVGKGVDEKAVVKSVIG 293
Query: 241 DSSKARKV 248
+ A KV
Sbjct: 294 TKAPAIKV 301
Score = 147 (56.8 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAG 282
V +D YFRPAEV+ L GD S A+K LGW P + +Q+V MV D+E A+ +L G
Sbjct: 306 VAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMVASDLEQAQSHALLKKHG 365
Query: 283 Y 283
Y
Sbjct: 366 Y 366
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 682 (245.1 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 129/224 (57%), Positives = 169/224 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY D+TD+SSL + ++ + P E+YNLAAQSHV VSF++ +YTA+V A G LR+L+A+
Sbjct: 103 MKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAI 162
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAAHWYTVNYREA 119
R+ + ++R+YQA +SE++G PQ+E TPF+PRSPYA +K W +NYREA
Sbjct: 163 RTCGMEK---NVRFYQASTSELYGKVVETPQNEQTPFYPRSPYACAKMYGFWIVINYREA 219
Query: 120 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF-LGNLQASRDWGFAGDY 178
Y ++ACNGILFNHESPRRGENFVTRKITR+V +I Q + F LGNL + RDWG A DY
Sbjct: 220 YNMYACNGILFNHESPRRGENFVTRKITRSVAKI-YHKQMEYFELGNLDSKRDWGHASDY 278
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNWK 220
VEAMWMMLQ+E P DYV+AT E+H+V EF+E AF ++ + WK
Sbjct: 279 VEAMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWK 322
Score = 139 (54.0 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 223 VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKV 277
V I+ +YFRP EVD L+GD+SKA + L W P+V F +LV M+ DIEL ++ +
Sbjct: 340 VRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIELMRKNPI 394
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 659 (237.0 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 124/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SFE+ +YTA+V G LRLL+A+
Sbjct: 78 MKLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELAEYTANVDGVGTLRLLDAI 137
Query: 61 RSHIADSGRSH-IRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ G ++ +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 138 KT----CGLTNSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 193
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL + RDWG A DY
Sbjct: 194 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQLESFSLGNLDSKRDWGHAKDY 253
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQQE+P+D V+AT E H+V EF+E +F +VG
Sbjct: 254 VEAMWLMLQQEEPEDLVIATGEVHSVREFVEKSFKHVG 291
Score = 162 (62.1 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 222 HVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
HV +D +Y+RP EV+ L+GDS+KA LGWK ++ FE+LVK MVD DI L K
Sbjct: 314 HVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFEELVKEMVDADIHLMK 365
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 653 (234.9 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIG 293
Score = 167 (63.8 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD SKA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367
Score = 37 (18.1 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 217 LNWKDHVVIDK--RYFRPAEVDNLK 239
LNWK V D+ R A+V+ ++
Sbjct: 343 LNWKPRVAFDELVREMVQADVELMR 367
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 653 (234.9 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIG 293
Score = 167 (63.8 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD SKA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KVHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367
Score = 37 (18.1 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 217 LNWKDHVVIDK--RYFRPAEVDNLK 239
LNWK V D+ R A+V+ ++
Sbjct: 343 LNWKPRVAFDELVREMVQADVELMR 367
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 653 (234.9 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIG 293
Score = 167 (63.8 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD SKA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367
Score = 37 (18.1 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 217 LNWKDHVVIDK--RYFRPAEVDNLK 239
LNWK V D+ R A+V+ ++
Sbjct: 343 LNWKPRVAFDELVREMVQADVELMR 367
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 654 (235.3 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIG 293
Score = 164 (62.8 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD +KA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMR 367
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 653 (234.9 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 50 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 109
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 110 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 165
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 166 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 225
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 226 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIG 263
Score = 164 (62.8 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD +KA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 284 KVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMR 337
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 653 (234.9 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIG 293
Score = 164 (62.8 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD +KA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMR 367
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 652 (234.6 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A
Sbjct: 91 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDAT 150
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 151 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 206
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G + LGNL A RDWG A DY
Sbjct: 207 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAKRDWGHAKDY 266
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V++T E H+V EF+E AF ++G
Sbjct: 267 VEAMWLMLQTDEPEDFVISTGEVHSVREFVEKAFMHIG 304
Score = 164 (62.8 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EV+ L+GD SKA+ LGW P+V F +LVK MV+ DIEL K
Sbjct: 325 KIHVKVDHKYYRPTEVEFLQGDCSKAKNKLGWIPKVSFNELVKEMVEADIELMK 378
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 653 (234.9 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIG 293
Score = 162 (62.1 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
K HV +D +Y+RP EVD L+GD +KA++ L WKPRV F++LV+ MV D+EL +
Sbjct: 314 KVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVPFDELVREMVHADVELMR 367
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 673 (242.0 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 129/232 (55%), Positives = 165/232 (71%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
+ LHY DLTDAS+L + + P E+YNL AQSHV VSF++ +YT DV G LRLL+A+
Sbjct: 63 LTLHYGDLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMSEYTGDVDGLGCLRLLDAI 122
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREA 119
RS + ++YYQA +SE++G PQSETTPF+PRSPYA +K A+W VNYREA
Sbjct: 123 RSCGMEK---KVKYYQASTSELYGKVQEIPQSETTPFYPRSPYAVAKQYAYWIVVNYREA 179
Query: 120 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
Y ++ACNGILFNHESPRRG FVTRKITR V I G L+LGN+ A RDWG A DYV
Sbjct: 180 YDMYACNGILFNHESPRRGPTFVTRKITRFVAGIACGRDEILYLGNINAKRDWGHARDYV 239
Query: 180 EAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGL--NWKDHVVIDKRY 229
EAMW+MLQQEKP+D+V+AT E+H+V EF+E +F + + W+ ++ Y
Sbjct: 240 EAMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEIDIIIKWRGEAEKEEGY 291
Score = 141 (54.7 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 213 GYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELA 272
GY K +V ID++Y+RP EVD L G+ +KA+K+L W+ + F +LVK MV +DIE
Sbjct: 290 GYCEKTGKVYVKIDEKYYRPTEVDLLLGNPNKAKKLLQWQIKTSFGELVKEMVAKDIEYI 349
Query: 273 K 273
K
Sbjct: 350 K 350
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 653 (234.9 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 122/218 (55%), Positives = 162/218 (74%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A
Sbjct: 77 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDAT 136
Query: 61 RSHIADSGRSH-IRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ G + +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 137 KT----CGLINTVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 192
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 193 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMESFSLGNLDAKRDWGHAKDY 252
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V++T E H+V EF+E AF ++G
Sbjct: 253 VEAMWLMLQTDEPEDFVISTGEVHSVREFVEKAFKHIG 290
Score = 159 (61.0 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIEL 271
K HV +D +Y+RP EVD L+GD S+A+ LGW P+V F++LVK MV+ D++L
Sbjct: 311 KIHVKVDLKYYRPTEVDFLQGDCSQAKNKLGWTPKVSFDELVKEMVESDVKL 362
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 154/288 (53%), Positives = 198/288 (68%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY D+TD+S L + + TI P EVY+LAAQSHV VSF++P+YTA+V A G LRLL+A+
Sbjct: 110 LHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAI-- 167
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
H A +R+YQA +SE++G PQSE TPF+PRSPYA +K +W VNYREAY
Sbjct: 168 H-ACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYN 226
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+FACNGILFNHESPRRGE FVTRKITR+V +I +G Q + LGNL A RDWG A +YVEA
Sbjct: 227 MFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEA 286
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNW-----------KDHVV---I 225
MW +LQ + PDD+V+AT + +V EF +AF +G L W KD V+ +
Sbjct: 287 MWRILQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKDGVIRVKV 346
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
+Y+RP EV+ L G++ KA+K LGW+ +V +LVK MV DI L K
Sbjct: 347 SPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 394
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 154/288 (53%), Positives = 198/288 (68%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY D+TD+S L + + TI P EVY+LAAQSHV VSF++P+YTA+V A G LRLL+A+
Sbjct: 110 LHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAI-- 167
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
H A +R+YQA +SE++G PQSE TPF+PRSPYA +K +W VNYREAY
Sbjct: 168 H-ACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYN 226
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+FACNGILFNHESPRRGE FVTRKITR+V +I +G Q + LGNL A RDWG A +YVEA
Sbjct: 227 MFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEA 286
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNW-----------KDHVV---I 225
MW +LQ + PDD+V+AT + +V EF +AF +G L W KD V+ +
Sbjct: 287 MWRILQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKDGVIRVKV 346
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 273
+Y+RP EV+ L G++ KA+K LGW+ +V +LVK MV DI L K
Sbjct: 347 SPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 394
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 153/290 (52%), Positives = 200/290 (68%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY D+TD+S L + + TI P E+Y+LAAQSHV VSF++P+YTA+V A G LRLL+A+
Sbjct: 93 LHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAI-- 150
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
H A +R+YQA +SE++G PQSE TPF+PRSPYA +K +W VNYREAY
Sbjct: 151 H-ACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYK 209
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+FACNGILFNHESPRRGE FVTRKITR+V +I + Q + LGNL A RDWG A +YVEA
Sbjct: 210 MFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEA 269
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNWK-----------DHVV---I 225
MW +LQQ+ PDD+V+AT + +V EF +AF +G L W+ D VV +
Sbjct: 270 MWRILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQDGVVRVKV 329
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKRE 275
+Y+RP EV+ L G+ +KARK LGW+P++ +LVK MV DI L + +
Sbjct: 330 SPKYYRPTEVETLLGNPAKARKTLGWEPKITVPELVKEMVASDIALMEAD 379
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 153/290 (52%), Positives = 200/290 (68%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY D+TD+S L + + TI P E+Y+LAAQSHV VSF++P+YTA+V A G LRLL+A+
Sbjct: 93 LHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAI-- 150
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
H A +R+YQA +SE++G PQSE TPF+PRSPYA +K +W VNYREAY
Sbjct: 151 H-ACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYK 209
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+FACNGILFNHESPRRGE FVTRKITR+V +I + Q + LGNL A RDWG A +YVEA
Sbjct: 210 MFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEA 269
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG--LNWK-----------DHVV---I 225
MW +LQQ+ PDD+V+AT + +V EF +AF +G L W+ D VV +
Sbjct: 270 MWRILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQDGVVRVKV 329
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKRE 275
+Y+RP EV+ L G+ +KARK LGW+P++ +LVK MV DI L + +
Sbjct: 330 SPKYYRPTEVETLLGNPAKARKTLGWEPKITVPELVKEMVASDIALMEAD 379
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 658 (236.7 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+A+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 139
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 140 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F Y+G
Sbjct: 256 VEAMWLMLQTDEPEDFVIATGEVHSVREFVEKSFFYIG 293
Score = 64 (27.6 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 220 KDHVVIDKRYFRPAEVDNLKGD 241
K HV ++ +Y+RP EV L+GD
Sbjct: 314 KIHVTVNHKYYRPTEVSFLQGD 335
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 653 (234.9 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 123/218 (56%), Positives = 164/218 (75%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV G LRLL+AV
Sbjct: 51 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 110
Query: 61 RS-HIADSGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
++ + +S +++YQA +SE++G PQ ETTPF+PRSPY A+K A+W VN+RE
Sbjct: 111 KTCGLINS----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 166
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
AY LFA NGILFNHESPRRG NFVTRKI+R+V +I +G LGNL A RDWG A DY
Sbjct: 167 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 226
Query: 179 VEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVG 216
VEAMW+MLQ ++P+D+V+AT E H+V EF+E +F ++G
Sbjct: 227 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIG 264
Score = 54 (24.1 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 220 KDHVVIDKRYFRPAEV 235
K HV +D +Y+RP EV
Sbjct: 285 KIHVTVDLKYYRPTEV 300
>GENEDB_PFALCIPARUM|PF08_0077 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase,
putative" species:5833 "Plasmodium falciparum" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 138/285 (48%), Positives = 191/285 (67%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DL D+S++ + I P+E+YNLAAQSHV VSFE+P+YT + A G LR+LE +R
Sbjct: 52 LHYGDLLDSSNICSLICEIKPNEIYNLAAQSHVKVSFEMPEYTTEATALGTLRILEGIRI 111
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPPP-QSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
S +I++Y A +SE+FG P Q+E TPF+P SPYA +K AH+ T+NYRE+Y
Sbjct: 112 ----SKVKNIKFYNASTSELFGKVQCPIQNENTPFYPVSPYAIAKLYAHYITINYRESYN 167
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+F NGILFNHESPRRGE FVTRKITR + +I+ L++ + LGN+ RDWG A DYV A
Sbjct: 168 MFCINGILFNHESPRRGETFVTRKITRGIAKIQKKLETSIILGNIDTYRDWGHAKDYVYA 227
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLN--W------------KDHVVIDK 227
M++MLQQ + DD+V+ + E H+V EF E++F +V ++ W ++V+I K
Sbjct: 228 MYLMLQQNEADDFVICSNEQHSVREFCEISFSFVNIHIKWIGKGIQEIGVDQNNNVLIKK 287
Query: 228 --RYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIE 270
+YFR EV+ L GD SKA+ +L W+P F QLV M+ D++
Sbjct: 288 HEKYFRNCEVNTLLGDCSKAKNILKWEPTYTFTQLVYEMLKCDMQ 332
>UNIPROTKB|Q8IAX4 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 138/285 (48%), Positives = 191/285 (67%)
Query: 3 LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
LHY DL D+S++ + I P+E+YNLAAQSHV VSFE+P+YT + A G LR+LE +R
Sbjct: 52 LHYGDLLDSSNICSLICEIKPNEIYNLAAQSHVKVSFEMPEYTTEATALGTLRILEGIRI 111
Query: 63 HIADSGRSHIRYYQAGSSEMFGSTPPP-QSETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
S +I++Y A +SE+FG P Q+E TPF+P SPYA +K AH+ T+NYRE+Y
Sbjct: 112 ----SKVKNIKFYNASTSELFGKVQCPIQNENTPFYPVSPYAIAKLYAHYITINYRESYN 167
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
+F NGILFNHESPRRGE FVTRKITR + +I+ L++ + LGN+ RDWG A DYV A
Sbjct: 168 MFCINGILFNHESPRRGETFVTRKITRGIAKIQKKLETSIILGNIDTYRDWGHAKDYVYA 227
Query: 182 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLN--W------------KDHVVIDK 227
M++MLQQ + DD+V+ + E H+V EF E++F +V ++ W ++V+I K
Sbjct: 228 MYLMLQQNEADDFVICSNEQHSVREFCEISFSFVNIHIKWIGKGIQEIGVDQNNNVLIKK 287
Query: 228 --RYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIE 270
+YFR EV+ L GD SKA+ +L W+P F QLV M+ D++
Sbjct: 288 HEKYFRNCEVNTLLGDCSKAKNILKWEPTYTFTQLVYEMLKCDMQ 332
>UNIPROTKB|F1MBF1 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070401 "NADP+ binding" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0070401 GO:GO:0019673 GO:GO:0008446
GeneTree:ENSGT00440000033640 EMBL:DAAA02055917 EMBL:DAAA02055918
EMBL:DAAA02055919 EMBL:DAAA02055920 EMBL:DAAA02055921
EMBL:DAAA02055922 IPI:IPI00695235 Ensembl:ENSBTAT00000015992
OMA:XELVSEM ArrayExpress:F1MBF1 Uniprot:F1MBF1
Length = 142
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 86/146 (58%), Positives = 106/146 (72%)
Query: 37 VSFEIPDYTADVVATGALRLLEAVRSHIADSGR-SHIRYYQAGSSEMFGSTPP-PQSETT 94
+SF++ +YTADV G LRLL+AV++ G S +R+YQA +SE++G PQ ETT
Sbjct: 1 ISFDLAEYTADVDGVGTLRLLDAVKT----CGLISSVRFYQASTSELYGKVQEIPQKETT 56
Query: 95 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIK 154
PF+PRSPY A+K A+W VN+REAY LFA NGILFNHESPRRG NFVTRKI+R+V +I
Sbjct: 57 PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIH 116
Query: 155 IGLQSKLFLGNLQASRDWGFAGDYVE 180
+G LGNL A RDWG A DYVE
Sbjct: 117 LGQLECFSLGNLDAKRDWGHAKDYVE 142
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 82/281 (29%), Positives = 136/281 (48%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
+ + YADL D SSL++ ++ PD +++LAAQS+ SF+IP T G +LE +
Sbjct: 56 ISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENI 115
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPP--PQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
R A G + + SSE++G +E T FH SPY+ SK + Y E
Sbjct: 116 RILKAKDGYDPV-VHVCSSSEVYGRAKVGIKLNEDTTFHGASPYSISKIGTDYLGRFYGE 174
Query: 119 AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF-LGNLQASRDWGFAGD 177
AY + + H PRR + F + + + I+ G Q + +GNL + R + A D
Sbjct: 175 AYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARD 234
Query: 178 YVEAMWMM-LQQEK---P--DDYVVATEESHTVEEFLEVAFGYVGLNWKD-HVVIDKRYF 230
+ A +++ L+ +K P + + +A EE+ + E +E+ + KD + D+
Sbjct: 235 AIRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLSFS--TRKDIKIEQDEERL 292
Query: 231 RPAEVDNLKGDSSKARKVLGWKPRVG----FEQLVKMMVDE 267
RP + D D++K + + WKP + FE L+ DE
Sbjct: 293 RPIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWRDE 333
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 78/258 (30%), Positives = 123/258 (47%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ D+ +++ + I PD +++LAA+S V S+ T G L +L+AVR D
Sbjct: 47 DIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLD 106
Query: 67 SGRSHIRYYQAGSSEMFGSTPP---PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 123
R GSSE +G P P SE P SPY SK + Y +AYG+
Sbjct: 107 C-----RILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMD 161
Query: 124 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF-LGNLQASRDWGFAGDYVEAM 182
+ FNH P + FVT+ + + I++ Q + +GNL+A RD+ D V+A
Sbjct: 162 IIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY 221
Query: 183 WMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGD 241
W++ Q K D Y V + +++ L++ N K ++ RP+EV L G
Sbjct: 222 WLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMA--NVKIDTELNPLQLRPSEVPTLIGS 279
Query: 242 SSKARKVLGWKPRVGFEQ 259
+ + + GWKPR+ E+
Sbjct: 280 NKRLKDSTGWKPRIPLEK 297
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 80/278 (28%), Positives = 130/278 (46%)
Query: 4 HYADLTDASSLRR-WLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 62
H DL + SL W + LPD V +LA Q++V +F P T + G L LL+A+++
Sbjct: 36 HRYDLLEPDSLGDLWPE--LPDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKA 93
Query: 63 HIADSGRSHIRYYQAGS--SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
SG Y +G ++ + P E P HPR+PYA SK AA + +
Sbjct: 94 R-GFSGT--FLYISSGDVYGQVAEAALPIHEELIP-HPRNPYAVSKLAAESLCLQWGITE 149
Query: 121 GLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS-KLFLGNLQASRDWGFAGDYV 179
G FNH P + ++FV R + R+K GLQ+ +L +G++ SRD+ D +
Sbjct: 150 GWRVLVARPFNHIGPGQKDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVL 209
Query: 180 EAMWMMLQQ-EKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNL 238
A +L E Y V + + + E +E+ + + +V D R AE +
Sbjct: 210 SAYLRLLSHGEAGAVYNVCSGQEQKIRELIELLADIAQVELE--IVQDPARMRRAEQRRV 267
Query: 239 KGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREK 276
+G ++ GWKP + +Q ++ ++ D E RE+
Sbjct: 268 RGSHARLHDTTGWKPEITIKQSLRAILS-DWESRVREE 304
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/266 (28%), Positives = 117/266 (43%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+TD S+ + T PD V++LAAQS+ AVS+ P T G + EA+R
Sbjct: 49 DITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRV--- 105
Query: 67 SGRSHIRYYQAGSSEMFGSTPP---PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 123
R H + AGSS +G P P +E P PY SK A Y ++YG+
Sbjct: 106 --RPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMH 163
Query: 124 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 183
+FN PR+ + ++ + R QS + +GNL+ R D A+
Sbjct: 164 TVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALM 223
Query: 184 MMLQQ-EKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVV--IDKRYFRPAEVDNLKG 240
+ML + E DY V ++ + + L+ + +D +V +D RP + + G
Sbjct: 224 LMLDKGEAGADYNVGGSIAYEMGDVLKQV---IAACKRDDIVPEVDPALLRPTDEKIIYG 280
Query: 241 DSSKARKVLGWKPRVGFEQLVKMMVD 266
D SK + GW+ + Q + M D
Sbjct: 281 DCSKLAAITGWQQEICLTQTIADMFD 306
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 229 (85.7 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 77/272 (28%), Positives = 121/272 (44%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH--- 63
D+ D + + R L PD V N AA+SHV S E P G L LLEAVR +
Sbjct: 58 DIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKA 117
Query: 64 IADSGRSHIRYYQAGSSEMFGSTPPPQ--SETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
+ D+ R R+ + E++G+ +ETTP+ P SPY+ASK A+ + YG
Sbjct: 118 LPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYG 177
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
L N+ P +F + I + + G ++ G+ + RDW F D+ EA
Sbjct: 178 LPVLTTNCSNNYGPY---HFPEKLIPLVIAKALAGEPLPVY-GDGKQVRDWLFVSDHCEA 233
Query: 182 MWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNW--KDHVVIDKR--YF--RPAE 234
+ +L + + + Y V E ++ + + +D + + Y RP
Sbjct: 234 IRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH 293
Query: 235 VDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
D+SK + LGW+P FEQ + + VD
Sbjct: 294 DRRYAIDASKLKDELGWEPAYTFEQGIALTVD 325
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 227 (85.0 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 77/272 (28%), Positives = 120/272 (44%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH--- 63
D+ D + + R L PD V N AA+SHV S E P G L LLEAVR +
Sbjct: 58 DIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKA 117
Query: 64 IADSGRSHIRYYQAGSSEMFGSTPPPQ--SETTPFHPRSPYAASKCAAHWYTVNYREAYG 121
+ D+ R R+ + E++G+ +ETTP+ P SPY+ASK A+ + YG
Sbjct: 118 LPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYG 177
Query: 122 LFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
L N+ P +F + I + + G ++ G+ + RDW F D+ EA
Sbjct: 178 LPVLTTNCSNNYGPY---HFPEKLIPLVIAKALAGEPLPVY-GDGKQVRDWLFVSDHCEA 233
Query: 182 MWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNW--KDHVVIDKR--YF--RPAE 234
+ +L + + + Y V E ++ + + +D + + Y RP
Sbjct: 234 IRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH 293
Query: 235 VDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
D+SK + LGW+P FEQ + VD
Sbjct: 294 DRRYAIDASKLKDELGWEPAYTFEQGIAQTVD 325
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 214 (80.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 75/278 (26%), Positives = 128/278 (46%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVAT---GALRLLEAVRS- 62
D+ D + + + PD V +LAA+SHV S AD V T G LLE ++
Sbjct: 59 DICDLNVIENIFEKYQPDAVMHLAAESHVDRSIS---GAADFVQTNIVGTYTLLEVAKNY 115
Query: 63 -HIADSGR-SHIRYYQAGSSEMFGS---TPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 117
H D + + R++ + E++G + P +E +P+HP SPY+ASK A++ +
Sbjct: 116 WHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWH 175
Query: 118 EAYGL-FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAG 176
YGL N+ + + E + I+ AV +G ++ G+ Q RDW F
Sbjct: 176 RTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAV----MGKPLPIY-GDGQQIRDWLFVE 230
Query: 177 DYVEAMWMMLQQEKP-DDYVVATE-ESHTVEEFLEVA--FGYVGLNWKDHVVI--DKRYF 230
D+V+A +++L + + ++Y + E +E + + + +H+ D F
Sbjct: 231 DHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTF 290
Query: 231 ---RPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMV 265
RP D SK LGW+P++ FEQ ++ V
Sbjct: 291 VKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTV 328
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 208 (78.3 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 83/291 (28%), Positives = 132/291 (45%)
Query: 2 KLHY--ADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 59
+ H+ AD+ D + L + L PD + +LAA+SHV S + P G LLEA
Sbjct: 51 RYHFVQADICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEA 110
Query: 60 VRSHIADSGRSH---IRYYQAGSSEMFGSTPPPQ--SETTPFHPRSPYAASKCAAHWYTV 114
RS+ G++ R + + E+FGS SET+ + P SPY+ASK +A
Sbjct: 111 CRSYYQTLGQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVR 170
Query: 115 NYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF--LGNLQASRDW 172
+ Y L I+ + S G K+ + + LQSK GN Q RDW
Sbjct: 171 AWHRTYAL----PIVITNCSNNYGPFQYPEKLIPLM--VSNALQSKPLPIYGNGQQVRDW 224
Query: 173 GFAGDYVEAMWMMLQQ-EKPDDYVV--ATEESH-TV--------EEFL-----EVAFGYV 215
+ D+V+A++++ Q + Y + + E+++ TV EE + +A G
Sbjct: 225 LYVDDHVKALYLVATQGQLGQTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNA 284
Query: 216 GLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
G V+D RP D+SK ++ LGW+P+ FE ++ V+
Sbjct: 285 GFADLIQYVVD----RPGHDVRYAIDASKIQRELGWRPQESFESGLRKTVE 331
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 201 (75.8 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 71/282 (25%), Positives = 131/282 (46%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
M++ DL D+ + I D +++L A + S+ P D G L +LEA
Sbjct: 52 MEVVSGDLRDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAA 109
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAAHWYTVNYREA 119
+ + SH + +SE++G+ P E P P+SPY+ASK AA ++Y +
Sbjct: 110 KKNEI----SH--FIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNS 163
Query: 120 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
+ L FN PR+ + I + +I G + ++ LG+L RD F D
Sbjct: 164 FNLNVNIARPFNTYGPRQSARAI---IPTIITQILSGAK-EIKLGDLSPKRDLNFVLDTC 219
Query: 180 EAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRP--AEVD 236
E +L + + Y + + ++++E L + L+ K ++ D++ RP +EV
Sbjct: 220 EGFISLLNLKHFGEVYNIGSGVEYSMQEVLNLIQKI--LDSKVKIIQDEQRLRPKNSEVF 277
Query: 237 NLKGDSSKARKVLGWKPRVGFEQLVKMMVD---EDIELAKRE 275
L D++K +K W+ ++ E+ ++ ++ E++E K E
Sbjct: 278 RLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSE 319
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 200 (75.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 73/286 (25%), Positives = 124/286 (43%)
Query: 5 YADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH- 63
+AD+ D++ + R + PD V +LAA+SHV S P + G LLE R +
Sbjct: 56 HADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYW 115
Query: 64 --IADSGRSHIRYYQAGSSEMFGSTPPPQ-----------SETTPFHPRSPYAASKCAAH 110
+ + +++ R++ + E++G P P +ETT + P SPY+ASK ++
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175
Query: 111 WYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASR 170
+R YGL N+ P +F + I + G ++ G R
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYGPY---HFPEKLIPLVILNALEGKPLPIY-GKGDQIR 231
Query: 171 DWGFAGDYVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 229
DW + D+ A+ M++ + K + Y + H ++ L+V F L D +V
Sbjct: 232 DWLYVEDHARALHMVVTEGKAGETYNIG---GHNEKKNLDVVFTICDL--LDEIVPKATS 286
Query: 230 FRP--AEVDNLKG-------DSSKARKVLGWKPRVGFEQLVKMMVD 266
+R V + G D+ K + LGWKP FE ++ V+
Sbjct: 287 YREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 177 (67.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 61/179 (34%), Positives = 86/179 (48%)
Query: 6 ADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIA 65
AD+ A L L+ P+ V++LAAQ V S P + A V G +RL EA R
Sbjct: 55 ADIVTAD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQ--- 110
Query: 66 DSGRSHIRYYQAGSSEMFGSTPP--PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 123
+G I + +G S ++G TPP P ET P P SPYAA K A Y +R YGL
Sbjct: 111 -TGVRKIVHTSSGGS-IYG-TPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGL- 166
Query: 124 ACNGIL-FNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 181
C+ I N PR+ + + + G +++F G+ +RD+ F D V+A
Sbjct: 167 DCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVF-GDGTNTRDYVFVDDVVDA 224
Score = 57 (25.1 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 226 DKRYFRPAEVDNLKG---DSSKARKVLGWKPRVGFEQLVKMMVD 266
D F P + +LK D A +VLGW+P++ V+ V+
Sbjct: 263 DDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVE 306
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 197 (74.4 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 76/267 (28%), Positives = 116/267 (43%)
Query: 4 HYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS- 62
H DL D++S+ R L + P + +LAA +A+ + AD A A+ EAVR
Sbjct: 51 HRCDLRDSASIHRLLQEVQPTGIVHLAA---IALPSQAK---ADPSAAWAVNF-EAVRQL 103
Query: 63 -HIADSGRSHIRYYQAGSSEMFGST----PPPQSETTPFHPRSPYAASKCAAHWYTVNYR 117
+ H AGSSE +G++ +E T P +PYAA+K AA R
Sbjct: 104 GEAVLACSPHAVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAADVALGQMR 163
Query: 118 EAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF-LGNLQASRDWGFAG 176
GL A FNH P + ++V + +I G + +GNL A RD+
Sbjct: 164 ND-GLNAVRFRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVR 222
Query: 177 DYVEAMWMMLQQE-KPDD---YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRP 232
D V + L+ E P + +A+ ++ L G++ + D R
Sbjct: 223 DVVRGYRLALETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIA--IETDPAKLRK 280
Query: 233 AEVDNLKGDSSKARKVLGWKPRVGFEQ 259
+V GD+++AR LGW P + FEQ
Sbjct: 281 NDVPRTWGDANRARTELGWVPYLAFEQ 307
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 193 (73.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 67/271 (24%), Positives = 120/271 (44%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
+K + AD+ D +++ D P+ V + AA+SHV S + P + G +L+A
Sbjct: 48 IKFYKADVADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDAS 107
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ--SETTPFHPRSPYAASKCAAHWYTVNYRE 118
R + + ++ + E++G +E +P P SPY+ SK AA Y
Sbjct: 108 RKYGIE------KFVHISTDEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHR 161
Query: 119 AYGLFACNGILFNHESP-RRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGD 177
YGL N+ P + E + I +A+ I + + L R+W + D
Sbjct: 162 TYGLPVIVARPCNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQ----GLNV-REWLYVDD 216
Query: 178 YVEAMWMMLQQEKPDD-YVVAT-EESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEV 235
+EA++++LQ+ KP + Y + + EE +E E+ +G K +I RP
Sbjct: 217 CIEAVYLLLQKGKPGEAYNIGSGEEKGNIEVVKEI-LRILG---KPESLITFVEDRPGHD 272
Query: 236 DNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
+S K + WK +V F + ++ ++D
Sbjct: 273 FRYSLNSKKIKMNYAWKHKVNFNEGIRFVID 303
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 192 (72.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 78/277 (28%), Positives = 120/277 (43%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH--- 63
D+ D + L R PD V +LAA+SHV S + P + G LLEA R++
Sbjct: 59 DICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNA 118
Query: 64 IADSGRSHIRYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
+ + +S R++ + E++G ST +ETTP+ P SPY+ASK ++ + Y
Sbjct: 119 LTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY 178
Query: 121 GLFACNGILFNHESPRR-GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
GL N+ P E + I A+ G ++ GN Q RDW + D+
Sbjct: 179 GLPTLITNCSNNYGPYHFPEKLIPLMILNALA----GKSLPVY-GNGQQIRDWLYVEDHA 233
Query: 180 EAMWMMLQQEKPDD-YVVA--TEESH--TVEEFLEVAFGYVGLNWKDHVVIDKRYF---- 230
A++ + K + Y + E + VE E+ + N K H V R
Sbjct: 234 RALYCVATTGKVGETYNIGGHNERKNLDVVETICEL-LEELAPN-KPHGVAHYRDLITFV 291
Query: 231 --RPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMV 265
RP D+SK + LGW P+ FE ++ V
Sbjct: 292 ADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTV 328
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 192 (72.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 73/286 (25%), Positives = 127/286 (44%)
Query: 5 YADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHI 64
+AD+ DA ++ R PD V +LAA+SHV S P + G LLEA R++
Sbjct: 56 HADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYW 115
Query: 65 A--DSGRSH-IRYYQAGSSEMFGSTPPPQ-----------SETTPFHPRSPYAASKCAAH 110
+ DS + + R++ + E++G P P +ETT + P SPY+ASK ++
Sbjct: 116 SALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSD 175
Query: 111 WYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASR 170
++ YGL N+ P +F + I + G ++ G R
Sbjct: 176 HLVRAWKRTYGLPTIVTNCSNNYGPY---HFPEKLIPLVILNALEGKALPIY-GKGDQIR 231
Query: 171 DWGFAGDYVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 229
DW + D+ A++ ++ + K + Y + H ++ ++V L D +V ++
Sbjct: 232 DWLYVEDHARALYTVVTEGKAGETYNIG---GHNEKKNIDVVLTICDL--LDEIVPKEKS 286
Query: 230 FRP--AEVDNLKG-------DSSKARKVLGWKPRVGFEQLVKMMVD 266
+R V + G D+ K + LGWKP+ FE ++ V+
Sbjct: 287 YREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVE 332
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 192 (72.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 5 YADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH- 63
+AD+ DA ++ R PD V +LAA+SHV S P + G LLEA R++
Sbjct: 56 HADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYW 115
Query: 64 --IADSGRSHIRYYQAGSSEMFGSTPPPQ-----------SETTPFHPRSPYAASKCAAH 110
+ D + R++ + E++G P P +ETT + P SPY+ASK ++
Sbjct: 116 SALNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSD 175
Query: 111 WYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASR 170
++ YGL N+ P +F + I + G ++ G R
Sbjct: 176 HLVRAWKRTYGLPTIVTNCSNNYGPY---HFPEKLIPLVILNALEGKALPIY-GKGDQIR 231
Query: 171 DWGFAGDYVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 229
DW + D+ A++ ++ + K + Y + H ++ ++V L D +V ++
Sbjct: 232 DWLYVEDHARALYTVVTEGKAGETYNIG---GHNEKKNIDVVLTICDL--LDEIVPKEKS 286
Query: 230 FRP--AEVDNLKG-------DSSKARKVLGWKPRVGFEQLVKMMVD 266
+R V + G D+ K + LGWKP+ FE ++ V+
Sbjct: 287 YREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVE 332
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 76/287 (26%), Positives = 126/287 (43%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D + + AA+SH S + P G LLEA R + D IR++ + E++
Sbjct: 77 DAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKY--D-----IRFHHVSTDEVY 129
Query: 84 GSTP-----PPQSE--------TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILF 130
G P P E T ++P SPY+++K A+ + ++G+ A
Sbjct: 130 GDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCS 189
Query: 131 NHESPRRG-ENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQE 189
N+ P + E F+ R+IT + G++ KL+ G + RDW D+ +W +L +
Sbjct: 190 NNYGPYQHIEKFIPRQITNILS----GIKPKLY-GEGKNVRDWIHTNDHSTGVWAILTKG 244
Query: 190 K-PDDYVVATEESHTVEEFLEVAFGYVGL--NWKDHVVIDKRYFRPAEVDNLKGDSSKAR 246
+ + Y++ + +E LE+ + N DHV D R DS+K R
Sbjct: 245 RIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVT-D----RAGHDLRYAIDSTKLR 299
Query: 247 KVLGWKPRV-----GFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQ 288
+ LGWKP+ G E +K + + + K EK V+A Y Q+
Sbjct: 300 EELGWKPQFTNFEEGLEDTIKWYTEHE-DWWKAEKEAVEANYAKTQK 345
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 183 (69.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 71/285 (24%), Positives = 123/285 (43%)
Query: 6 ADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-- 63
AD+ DA + D V +LAA+SHV S P + G LLEA R++
Sbjct: 57 ADICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWS 116
Query: 64 -IADSGRSHIRYYQAGSSEMFGSTPPPQ-----------SETTPFHPRSPYAASKCAAHW 111
+ D + + R++ + E++G P P +ETT + P SPY+ASK ++
Sbjct: 117 GLDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDH 176
Query: 112 YTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRD 171
++ YGL N+ P +F + I + G ++ G RD
Sbjct: 177 LVRAWKRTYGLPTIVSNCSNNYGPY---HFPEKLIPLVILNALEGKALPIY-GKGDQIRD 232
Query: 172 WGFAGDYVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYF 230
W + D+ A++ ++ + K + Y + H ++ ++V F L D +V ++ +
Sbjct: 233 WLYVEDHARALYTVVTEGKAGETYNIG---GHNEKKNIDVVFTICDL--LDEIVPKEKSY 287
Query: 231 RP--AEVDNLKG-------DSSKARKVLGWKPRVGFEQLVKMMVD 266
R V + G D+ K + LGWKP+ FE ++ V+
Sbjct: 288 REQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVE 332
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 176 (67.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 69/266 (25%), Positives = 113/266 (42%)
Query: 1 MKLHYADLTDASSLRRWLDTILP-DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 59
++L D+TDA+ + D + D V + AA++HV + P+ G +LEA
Sbjct: 51 IRLVQGDITDAALVG---DLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEA 107
Query: 60 VRSHIADSGRSHIRYYQAGSSEMFGS----TPPPQSETTPFHPRSPYAASKCAAHWYTVN 115
VR H ++R + + E++G P +ETTP++P SPY+++K AA
Sbjct: 108 VRRH-------NVRLHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRA 160
Query: 116 YREAYGLFACNGILFNHESP-RRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGF 174
+ +YG+ A N+ P + E F+ R+IT + G + KL+ RDW
Sbjct: 161 WVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVL----TGRRPKLYGAGANV-RDWIH 215
Query: 175 AGDYVEAMWMMLQQEKPD-DYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPA 233
D+ A+W +L Y++ E + +G + D D R
Sbjct: 216 VDDHNSAVWRILTDGTIGRTYLIGAECERNNLTVMRTILKLMGRDPDD---FDHVTDRAG 272
Query: 234 EVDNLKGDSSKARKVLGWKPR-VGFE 258
D S + LGW P+ FE
Sbjct: 273 HDLRYAIDPSTLQDELGWAPKHTDFE 298
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 171 (65.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 73/277 (26%), Positives = 118/277 (42%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSH- 63
D+ D + L R PD V +LAA+SHV A+ ++V G LLEA R++
Sbjct: 64 DICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIV--GTFDLLEAARAYW 121
Query: 64 --IADSGRSHIRYYQAGSSEMFGS---TPPPQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
+ R R++ + E++G T +ETTP+ P SPY+ASK AA ++
Sbjct: 122 QQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQR 181
Query: 119 AYGLFACNGILFNHESPRR-GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGD 177
Y L + N+ PR+ E + I A+ G ++ G+ RDW F D
Sbjct: 182 TYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALS----GKPLPVY-GDGAQIRDWLFVED 236
Query: 178 YVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY-----F- 230
+ A++ ++ + + Y + T E ++ + + RY F
Sbjct: 237 HARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFV 296
Query: 231 --RPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMV 265
RP D++K R+ LGW P FE ++ V
Sbjct: 297 QDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTV 333
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 168 (64.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 64/240 (26%), Positives = 104/240 (43%)
Query: 26 VYNLAAQSHVAVSFE--IPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
+ N AA+SHV S E IP Y +V+ G + LLE V+ + HI+ Q + E++
Sbjct: 78 IVNFAAESHVDRSIENPIPFYDTNVI--GTVTLLELVKKY------PHIKLVQVSTDEVY 129
Query: 84 GSTPPPQ--SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR-GEN 140
GS +E TP P SPY++SK +A + Y + Y L N+ P + E
Sbjct: 130 GSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEK 189
Query: 141 FVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDD-YVVATE 199
+ +T A+ G + L+ L RDW D+ A+ ++L + + + Y +
Sbjct: 190 LIPLMVTNALE----GKKLPLYGDGLNV-RDWLHVTDHCSAIDVVLHKGRVGEVYNIGGN 244
Query: 200 ESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQ 259
T E +E +G KD + R ++ K + W+P+ FEQ
Sbjct: 245 NEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAI---NAEKMKNEFDWEPKYTFEQ 301
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 169 (64.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 70/270 (25%), Positives = 109/270 (40%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ DA +RR L D V + AA+SHV S P+ G LLE R H
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 67 SGRSHIRYYQAGSSEMFGSTPPPQ--SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 124
R+ + E++G+ +E TP P SPY+ASK + Y E +GL
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 125 CNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWM 184
N+ P + F + I + I G ++ G+ + RDW D+ A+
Sbjct: 186 LTTRCSNNYGPFQ---FPEKLIPLMIHNIVAGKPLPVY-GDGRNVRDWLHVKDHSTAIET 241
Query: 185 MLQQEKPDDY--VVATEE------SHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVD 236
+L+ KP + V E H + + L+ G G + + K R
Sbjct: 242 VLKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKD--RLGHDR 299
Query: 237 NLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
++K ++ LGW+P FE+ + VD
Sbjct: 300 RYAISAAKIKRELGWEPSYTFERGIAETVD 329
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/205 (26%), Positives = 97/205 (47%)
Query: 1 MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 60
++L D+TDA + + + D V + AA+SHV + + P+ G +LEAV
Sbjct: 51 IRLVQGDITDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAV 108
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ----SETTPFHPRSPYAASKCAAHWYTVNY 116
R H G +R + + E++G +E+TP++P SPY+A+K A +
Sbjct: 109 RRH----G---VRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAW 161
Query: 117 REAYGLFACNGILFNHESP-RRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFA 175
+YG+ A N+ P + E F+ R+IT + G + KL+ RDW
Sbjct: 162 VRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVL----TGRRPKLYGAGANV-RDWIHV 216
Query: 176 GDYVEAMWMMLQQEKPD-DYVVATE 199
D+ A+ +L + + Y++++E
Sbjct: 217 DDHNSAVRRILDRGRIGRTYLISSE 241
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 71/258 (27%), Positives = 115/258 (44%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ D ++LRR ++ + P+ V +LAA S VA Y A+VV G LLEA +A
Sbjct: 53 DICDLAALRRVVEEVEPEVVVHLAAISFVAHGEADAIYRANVV--GTRNLLEA----LAG 106
Query: 67 SGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFAC 125
R+ A S+ ++G+ P E+ P + YA SK A + + +
Sbjct: 107 LSRTPRAVLLASSANVYGNAPVELIDESVSLAPANDYAVSKLAMEYMARLWMHRLPIVIA 166
Query: 126 NGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM-WM 184
FN+ + +F+ KI R S + LGNL RD F+ V A+ ++
Sbjct: 167 RP--FNYTGVGQASHFLIPKIVSHFQR----RASVIELGNLDVERD--FSDVRVVALAYV 218
Query: 185 MLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKD-HVVIDKRYFRPAEVDNLKGDSS 243
L + P VV V EV G++ + V ++ + R EV L+GD S
Sbjct: 219 RLLEVVPAGQVVNVGSGQVVS-LREVLAMMSGISGHEIEVRVNPEFVRANEVKRLQGDVS 277
Query: 244 KARKVLG-WKPRVGFEQL 260
+ ++++G ++P E L
Sbjct: 278 RLKELIGGYQPTPLMETL 295
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 156 (60.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 68/269 (25%), Positives = 118/269 (43%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ D +R + D V +LAA + S+ PD D G L +++A R +
Sbjct: 64 DIRDPHGVREAMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAAR----E 117
Query: 67 SGRSHIRYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFAC 125
G + + + +SE++G+ P +E P +SPY+ASK A +++ ++
Sbjct: 118 LGVAKVVH--TSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYSSFDTPVA 175
Query: 126 NGILFNHESPRRGEN-FVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWM 184
FN PR+ F+ IT+ I G ++ L LG L +RD + D V
Sbjct: 176 IIRPFNTYGPRQSARAFIPTVITQ----IASGART-LRLGALHPTRDLNYVADTVAGFIA 230
Query: 185 MLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKD-HVVIDKRYFRP--AEVDNLKGD 241
+ + EK V+ + + E A + D +V D RP +EV+ L D
Sbjct: 231 VAESEKSVGEVINIGSNFEIS-MGETARMIADVMGADVEIVTDAERLRPDKSEVERLWAD 289
Query: 242 SSKARKVLGWKPRVGFEQLVKMMVDEDIE 270
+SKA+++L G + ++ + E +E
Sbjct: 290 TSKAKRLLDHGQNYGGKDGLRRGLVETVE 318
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 155 (59.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 70/277 (25%), Positives = 116/277 (41%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ D + L R PD V +LAA+SHV S G LLEA R++
Sbjct: 59 DICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQ 118
Query: 67 S-GRSH--IRYYQAGSSEMFGS---TPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
H R++ + E++G T +ET P+ P SPY+ASK ++ + Y
Sbjct: 119 MPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTY 178
Query: 121 GLFACNGILFNHESPRR-GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
GL N+ P E + I A+ G ++ +Q RDW F D+
Sbjct: 179 GLPTIVTNCSNNYGPYHFPEKLIPLMILNALD----GKPLPVYGDGMQI-RDWLFVEDHA 233
Query: 180 EAMWMMLQQEKPDD-YVVA--TEESH-----TVEEFLEVAFGY--VGL-NWKDHVVIDKR 228
A++ ++ + + Y + E+++ T+ LE G+ ++D + +
Sbjct: 234 RALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQD 293
Query: 229 YFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMV 265
RP D++K R+ LGW+P FE ++ V
Sbjct: 294 --RPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTV 328
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/277 (25%), Positives = 115/277 (41%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
D+ D + L R PD V +LAA+SHV S G LLEA R++
Sbjct: 59 DICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQ 118
Query: 67 S-GRSH--IRYYQAGSSEMFGS---TPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 120
H R++ + E++G T +ET P+ P SPY+ASK ++ + Y
Sbjct: 119 MPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTY 178
Query: 121 GLFACNGILFNHESPRR-GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
GL N+ P E + I A+ G ++ +Q RDW F D+
Sbjct: 179 GLPTIVTNCSNNYGPYHFPEKLIPLMILNALD----GKPLPVYGDGMQI-RDWLFVEDHA 233
Query: 180 EAMWMMLQQEKPDD-YVVA--TEESH-----TVEEFLEVAFGY--VGL-NWKDHVVIDKR 228
A++ ++ + + Y + E+++ T+ LE G+ ++D + +
Sbjct: 234 RALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQD 293
Query: 229 YFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMV 265
RP D++K R+ LGW P FE ++ V
Sbjct: 294 --RPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTV 328
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 98 (39.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 43/187 (22%), Positives = 77/187 (41%)
Query: 85 STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR 144
ST P +ETTP+ P SPY+ASK ++ + YG N+ P +F +
Sbjct: 168 STLPLFTETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPY---HFPEK 224
Query: 145 KITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDD-YVVATE-ESH 202
I + G ++ G RDW + D+ A++ ++ + K + Y + E
Sbjct: 225 LIPLVILNALEGKPLPIY-GKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKR 283
Query: 203 TVEEFLEVAFGYVGLNWKDHVVIDKRYF---RPAEVDNLKGDSSKARKVLGWKPRVGFEQ 259
+E + L K+ ++ + RP D++K L W+P+ FE
Sbjct: 284 NLEVVQTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFET 343
Query: 260 LVKMMVD 266
++ V+
Sbjct: 344 GLRKTVE 350
Score = 96 (38.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVAT---GALRLLEAVRSH 63
D+ D + L R PD V +LAA+SHV S +AD + T G LLEA R +
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSIT---GSADFIQTNIVGTYTLLEAARHY 114
Query: 64 ---IADSGRSHIRYYQAGSSEMFGSTPPP 89
+ +S R++ + E++G P P
Sbjct: 115 WMQLNTERKSAFRFHHISTDEVYGDLPHP 143
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 147 (56.8 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 65/272 (23%), Positives = 125/272 (45%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYT-ADVVATGALRLLEA 59
K D+ + +++ +T D V + AAQ+HV +SF ++T +V T L
Sbjct: 76 KFIQGDICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVL----V 131
Query: 60 VRSHIADSGRSHIRYYQAGSSEMFG-STPPPQSETTPFHPRSPYAASKCAAHWYTVNYRE 118
+H A+ + + + E++G ST E++P P +PYA+SK AA + +Y E
Sbjct: 132 AAAHEANVEK----FVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWE 187
Query: 119 AYGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGD 177
Y ++ S G + K I + + ++ + + LQ R++ +A D
Sbjct: 188 RYQF----PVVITRSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQR-RNFLYATD 242
Query: 178 YVEAMWMMLQQEKPDD-YVVATE-ESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEV 235
VEA +L++ KP + Y + T E V+ E+ + + + Y +
Sbjct: 243 VVEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPT 302
Query: 236 DNLKGD-SSKARKVLGWKPRVGFEQLVKMMVD 266
++L+ SS+ LGW+P+V +++ +K ++
Sbjct: 303 NDLRYPMSSEKMHNLGWRPKVPWKEGIKKTIE 334
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 69/281 (24%), Positives = 126/281 (44%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYTADVVATGALRLLEAV 60
K D+ D+ ++ +T D V + AAQ+HV +SF ++T V G LL A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY-VNVYGTHVLLSA- 128
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 119
A R ++ + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 129 ----AHEARVE-KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWER 183
Query: 120 YGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
Y ++ S G + K I + + ++ + + LQ +R++ +A D
Sbjct: 184 YKF----PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ-TRNFLYATDV 238
Query: 179 VEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGL--------NWKDHV----VI 225
VEA +L++ KP + Y + T +V + + + NW D+V
Sbjct: 239 VEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTN 298
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
D RY P + + + G LGW+P+V +++ +K ++
Sbjct: 299 DMRY--PMKSEKIHG--------LGWRPKVPWKEGIKKTIE 329
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 65/273 (23%), Positives = 120/273 (43%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYT-ADVVATGALRLLEA 59
K D+ D+ ++R ++ D V + AAQ+HV +SF ++T +V T L + A
Sbjct: 71 KFIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVL-VNTA 129
Query: 60 VRSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYRE 118
+ + ++ + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 130 YEARVE-------KFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWE 182
Query: 119 AYGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGD 177
Y ++ S G + K I + + ++ + + LQ R++ +A D
Sbjct: 183 RYKF----PVVITRSSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQR-RNFLYAAD 237
Query: 178 YVEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVV---IDKRYFRPA 233
VEA +L + +P + Y + T +V + + + D +D RP
Sbjct: 238 VVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPH 297
Query: 234 EVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
S K LGWKP+V +E+ +K V+
Sbjct: 298 NDMRYPMKSEKIHS-LGWKPKVPWEEGIKKTVE 329
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 142 (55.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 64/247 (25%), Positives = 99/247 (40%)
Query: 24 DEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEM 82
D V++ A + S E P DY V G +R+LE R+ + + Y A SS
Sbjct: 74 DYVFHFAGIGDIVPSIENPIDYLQTNVM-GTVRVLECARA----ANVKKLVY--AASSSC 126
Query: 83 FGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI-LFNHESPRRGENF 141
+G P E P P+ PYA SK ++ + YGL N I +FN R
Sbjct: 127 YGLADVPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGL-PVNSIRIFNAYGTRVRTTG 185
Query: 142 VTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDD-YVVATEE 200
V + + K+ + +G+ RD+ + D A + K + + +
Sbjct: 186 VYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVGETWNLGAGN 245
Query: 201 SHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQL 260
++ +E+ G V I KR P E D D SK ++ LGW+P + F
Sbjct: 246 PQSINRLVELIGGEVEY-------IPKR---PGEPDCTWADISKIKRDLGWEPTITFADG 295
Query: 261 VKMMVDE 267
V M+ E
Sbjct: 296 VSRMMSE 302
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 68/281 (24%), Positives = 126/281 (44%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYTADVVATGALRLLEAV 60
K D+ D+ ++ +T D V + AAQ+HV +SF ++T V G L+ A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY-VNVYGTHVLVSA- 128
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 119
A R ++ + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 129 ----AHEARVE-KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQ 183
Query: 120 YGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
Y ++ S G + K I + + ++ + + LQ +R++ +A D
Sbjct: 184 YKF----PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ-TRNFLYATDV 238
Query: 179 VEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGL--------NWKDHV----VI 225
VEA +L++ KP + Y + T +V + + + NW D+V
Sbjct: 239 VEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTN 298
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
D RY P + + + G LGW+P+V +++ +K ++
Sbjct: 299 DMRY--PMKSEKIHG--------LGWRPKVPWKEGIKKTIE 329
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 140 (54.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 64/271 (23%), Positives = 122/271 (45%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYTADVVATGALRLLEAV 60
K D+ ++ ++ +T D V + AAQ+HV +SF ++T V G L+ A
Sbjct: 71 KFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY-VNVYGTHVLVSA- 128
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 119
A R ++ + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 129 ----AHEARVE-KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWER 183
Query: 120 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYV 179
Y A N P + + + I + + ++ + + LQ +R++ +A D V
Sbjct: 184 YKFPAVITRSSNVYGPHQ---YPEKVIPKFISLLQHNRKCCIHGSGLQ-TRNFLYATDVV 239
Query: 180 EAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGLNWKDHVV---IDKRYFRPAEV 235
EA +L++ KP + Y + T +V + + + + + +D RP
Sbjct: 240 EAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTND 299
Query: 236 DNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
S K + LGW+P+V +++ +K +D
Sbjct: 300 MRYPMKSEKIQG-LGWRPKVPWKEGIKKTID 329
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 139 (54.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 68/281 (24%), Positives = 126/281 (44%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYTADVVATGALRLLEAV 60
K D+ D+ ++ +T D V + AAQ+HV +SF ++T V G L+ A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY-VNVYGTHVLVSA- 128
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 119
A R ++ + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 129 ----AHEARVE-KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQ 183
Query: 120 YGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
Y ++ S G + K I + + ++ + + LQ +R++ +A D
Sbjct: 184 YKF----PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQ-TRNFLYATDV 238
Query: 179 VEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVGL--------NWKDHV----VI 225
VEA +L++ KP + Y + T +V + + + NW D+V
Sbjct: 239 VEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTN 298
Query: 226 DKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
D RY P + + + G LGW+P+V +++ +K ++
Sbjct: 299 DMRY--PMKSEKIHG--------LGWRPKVPWKEGIKKTIE 329
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 137 (53.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 63/239 (26%), Positives = 101/239 (42%)
Query: 24 DEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSE 81
D V + AA++HV +V P +++V T L L A+R HI R+ + E
Sbjct: 79 DTVAHFAAETHVDRSVVASGPFVASNLVGTQVL-LDAALRHHIG-------RFLHVSTDE 130
Query: 82 MFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGEN 140
++GS +E P P SPYAASK + + Y + +G+ N+ PR+
Sbjct: 131 VYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQ--- 187
Query: 141 FVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDD-YVVATE 199
F + I V R+ GL ++ G+ + RDW D+ + + L + + Y +
Sbjct: 188 FPEKMIPLFVTRLLDGLDVPVY-GDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGG 246
Query: 200 ESHTVEEFLEVAFGYVGLNW-KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
T E E+ G + V D++ D SK LG++PRV F
Sbjct: 247 WEATNLELTEILLEACGAPASRISFVTDRK----GHDRRYSLDYSKIAGELGYRPRVDF 301
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 63/244 (25%), Positives = 101/244 (41%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D + + AA V S P T TG L +L A + S + A SS +
Sbjct: 96 DYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKS------FVYAASSSTY 149
Query: 84 GSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI-LFNHESPRRGENF 141
G P P+ E P SPYA +K Y + + YGL C G+ FN R+ +
Sbjct: 150 GDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYGL-NCTGLRYFNVFGKRQDPDG 208
Query: 142 VTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQE---KPDDYVVAT 198
+ I + L G+ + SRD+ F + V+A + K Y VA
Sbjct: 209 AYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVAL 268
Query: 199 EES---HTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRV 255
+ +T+ L+VA G++++ FR +V + + D SKA+ ++G++P
Sbjct: 269 GDRTSLNTLFNSLKVALQANGVDYQKSPTYQD--FRAGDVRHSQADISKAKSLIGFEPEF 326
Query: 256 GFEQ 259
+Q
Sbjct: 327 KIQQ 330
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 63/244 (25%), Positives = 101/244 (41%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D + + AA V S P T TG L +L A + S + A SS +
Sbjct: 96 DYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKS------FVYAASSSTY 149
Query: 84 GSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI-LFNHESPRRGENF 141
G P P+ E P SPYA +K Y + + YGL C G+ FN R+ +
Sbjct: 150 GDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYGL-NCTGLRYFNVFGKRQDPDG 208
Query: 142 VTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQE---KPDDYVVAT 198
+ I + L G+ + SRD+ F + V+A + K Y VA
Sbjct: 209 AYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVAL 268
Query: 199 EES---HTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRV 255
+ +T+ L+VA G++++ FR +V + + D SKA+ ++G++P
Sbjct: 269 GDRTSLNTLFNSLKVALQANGVDYQKSPTYQD--FRAGDVRHSQADISKAKSLIGFEPEF 326
Query: 256 GFEQ 259
+Q
Sbjct: 327 KIQQ 330
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 66/272 (24%), Positives = 118/272 (43%)
Query: 2 KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF-EIPDYTADVVATGALRLLEAV 60
K D+ D+ ++ + D V + AAQ+HV +SF ++T V G L+ A
Sbjct: 71 KFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTY-VNVYGTHVLVNAA 129
Query: 61 RSHIADSGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 119
++G Y + E++G + + E++P P +PYA+SK AA + +Y E
Sbjct: 130 Y----EAGVEKFIY--VSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWER 183
Query: 120 YGLFACNGILFNHESPRRGENFVTRK-ITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDY 178
Y ++ S G + K I + + ++ + + LQ R++ +A D
Sbjct: 184 YKF----PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQR-RNFLYAADV 238
Query: 179 VEAMWMMLQQEKPDD-YVVATEESHTVEEFLEVAFGYVG-LNWKDHVV--IDKRYFRPAE 234
VEA +L + +P + Y + T +V + + + N + +D RP
Sbjct: 239 VEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN 298
Query: 235 VDNLKGDSSKARKVLGWKPRVGFEQLVKMMVD 266
S K LGWKP+V +E+ +K V+
Sbjct: 299 DMRYPMKSEKIHS-LGWKPKVPWEEGIKKTVE 329
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 63/254 (24%), Positives = 106/254 (41%)
Query: 24 DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEM 82
D++Y+LA S V F P T G L +L + R R+ +SE+
Sbjct: 184 DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAK-------RVGARFLLTSTSEV 235
Query: 83 FGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPR 136
+G PQ ET P RS Y K A T++Y + +FN PR
Sbjct: 236 YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR 295
Query: 137 RGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVV 196
+ R ++ V + + + G+ + +R + F D VE + +++ E + +
Sbjct: 296 MCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNL 353
Query: 197 ATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDN---LKGDSSKARKVLGWKP 253
T+ E +V + N I+ FRP D+ K D +KA+++LGW+P
Sbjct: 354 GNPGEFTMLELAKVVQETIDPNAN----IE---FRPNTEDDPHKRKPDITKAKELLGWEP 406
Query: 254 RVGFEQLVKMMVDE 267
+V Q + +MV +
Sbjct: 407 KVSLRQGLPLMVKD 420
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 122 (48.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 54/234 (23%), Positives = 96/234 (41%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D+V +LAA+SHV S G LL+A H S + Q + E++
Sbjct: 77 DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVAS------FVQVSTDEVY 130
Query: 84 GSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV 142
GS +E P P SPY+ASK + + + ++GL N+ PR+ F
Sbjct: 131 GSLEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQ---FP 187
Query: 143 TRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDD-YVVATEES 201
+ I R + + G + L+ L R+W D+V + + + + Y + +
Sbjct: 188 EKLIPRFITLLMDGHRVPLYGDGLNV-REWLHVDDHVRGIEAVRTRGRAGRVYNIGGGAT 246
Query: 202 HTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRV 255
+ +E + + G +W ++ R DS++ ++ LG+ P V
Sbjct: 247 LSNKELVGLLLEAAGADWGSVEYVEDR---KGHDRRYAVDSTRIQRELGFAPAV 297
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 107 (42.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 39/139 (28%), Positives = 60/139 (43%)
Query: 26 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIA--DSGRSHIRYYQAGSSEMF 83
+ N AA+S V SF P Y LLE VR + + R+ + + + E++
Sbjct: 94 IINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVHVSTDEVY 153
Query: 84 GSTPPPQS--ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENF 141
G S E + +P SPYAASK A +YR +Y + N PR+ E
Sbjct: 154 GEQDENASVDEKSKLNPTSPYAASKAAVDLIIQSYRYSYKISVTVIRANNVYGPRQYEE- 212
Query: 142 VTRKITRAVGRIKIGLQSK 160
+ I +G++K + K
Sbjct: 213 --KLIPMTLGKLKKFINQK 229
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 247 KVLGWKPRVGFEQLVKMMVDE 267
K LGW+P++ E ++ ++DE
Sbjct: 343 KSLGWRPQIPLETGLRKLIDE 363
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 59/255 (23%), Positives = 102/255 (40%)
Query: 24 DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEM 82
D++Y+LA S + + P T G L +L + R R +SE+
Sbjct: 97 DQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAK-------RVGARILLTSTSEV 148
Query: 83 FGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPR 136
+G PQ+E+ P RS Y K A +Y +G+ +FN PR
Sbjct: 149 YGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 208
Query: 137 RGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVV 196
+ R ++ + + G + Q +R + + D VE + +++ ++ +
Sbjct: 209 MNIDD-GRVVSNFIAQALRGEALTVQKPGTQ-TRSFCYVSDMVEGLMRLMEGDQTGPINI 266
Query: 197 ATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVG 256
T+ E E + K V I P + K D SKA++VLGW+P+V
Sbjct: 267 GNPGEFTMVELAETVKELI----KPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVK 322
Query: 257 FEQLVKMMVDEDIEL 271
+ + +M +ED L
Sbjct: 323 LREGLPLM-EEDFRL 336
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 52/169 (30%), Positives = 72/169 (42%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D V NLAAQ+ V S P D G + +LE R H G H+ Y A SS ++
Sbjct: 79 DVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHH----GVKHLVY--ASSSSVY 132
Query: 84 GS-TPPPQS-ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENF 141
G+ T P S HP S YAA+K A Y YGL F P +
Sbjct: 133 GANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFFTVYGPWGRPDM 192
Query: 142 VTRKITRAV--GRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQ 188
T+A+ GR I + + G +Q RD+ + D VE + ++ +
Sbjct: 193 ALFLFTKAILEGR-PIDVYN---FGKMQ--RDFTYVDDIVEGVTRVMDR 235
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 56/246 (22%), Positives = 101/246 (41%)
Query: 24 DEVYNLAAQSHVAVSFEI-PDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEM 82
D +YNLA + V ++ P T G + +L + R R QA +SE+
Sbjct: 66 DRIYNLACPAS-PVHYQYNPVKTIKTSVMGTINMLGLAK-------RVRARILQASTSEV 117
Query: 83 FGST---PPPQS---ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPR 136
+G P P+S P RS Y K A ++Y G+ +FN PR
Sbjct: 118 YGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPR 177
Query: 137 RGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVV 196
E+ R ++ V + G ++ G+ +R + + D ++ + +++ ++ V
Sbjct: 178 MAEHD-GRVVSNFVVQALRGEDLTVY-GDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVN 235
Query: 197 ATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKG---DSSKARKVLGWKP 253
T +E A + + +I +RP D+ + D + AR +LGW+P
Sbjct: 236 LGNPEET--PIIEFARRIIAMTGSSSQII----YRPLPSDDPRQRQPDITLARTILGWEP 289
Query: 254 RVGFEQ 259
RV ++
Sbjct: 290 RVSLDE 295
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 97 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 149
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQSE P PR+ Y K A Y + G+ +FN PR
Sbjct: 150 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 209
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 210 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 267
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 268 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 323
Query: 258 EQ 259
E+
Sbjct: 324 EE 325
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 206
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQSE P PR+ Y K A Y + G+ +FN PR
Sbjct: 207 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 266
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 267 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 324
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 325 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 380
Query: 258 EQ 259
E+
Sbjct: 381 EE 382
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 206
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQSE P PR+ Y K A Y + G+ +FN PR
Sbjct: 207 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 266
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 267 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 324
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 325 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 380
Query: 258 EQ 259
E+
Sbjct: 381 EE 382
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 206
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQSE P PR+ Y K A Y + G+ +FN PR
Sbjct: 207 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 266
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 267 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 324
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 325 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 380
Query: 258 EQ 259
E+
Sbjct: 381 EE 382
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 206
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQSE P PR+ Y K A Y + G+ +FN PR
Sbjct: 207 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 266
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 267 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 324
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 325 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 380
Query: 258 EQ 259
E+
Sbjct: 381 EE 382
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 56/188 (29%), Positives = 80/188 (42%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
DL D + + V +LAAQ+ V S + P AD G L +LE R H +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 67 SGRSHIRYYQAGSSEMFGSTP--PPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 124
H+ Y A SS ++G P +E + HP S YAA+K A + Y Y L
Sbjct: 121 ----HLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPT 174
Query: 125 CNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFL-GNLQASRDWGFAGDYVEAMW 183
F P + K T+A I G ++ G+L SRD+ + D VE +
Sbjct: 175 TGLRFFTVYGPWGRPDMALFKFTKA---ILAGETIDVYNHGDL--SRDFTYIDDIVEGII 229
Query: 184 MMLQQEKP 191
+ Q+KP
Sbjct: 230 RV--QDKP 235
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 56/188 (29%), Positives = 80/188 (42%)
Query: 7 DLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAD 66
DL D + + V +LAAQ+ V S + P AD G L +LE R H +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 67 SGRSHIRYYQAGSSEMFGSTP--PPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 124
H+ Y A SS ++G P +E + HP S YAA+K A + Y Y L
Sbjct: 121 ----HLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPT 174
Query: 125 CNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFL-GNLQASRDWGFAGDYVEAMW 183
F P + K T+A I G ++ G+L SRD+ + D VE +
Sbjct: 175 TGLRFFTVYGPWGRPDMALFKFTKA---ILAGETIDVYNHGDL--SRDFTYIDDIVEGII 229
Query: 184 MMLQQEKP 191
+ Q+KP
Sbjct: 230 RV--QDKP 235
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 112 (44.5 bits), Expect = 0.00078, P = 0.00078
Identities = 60/237 (25%), Positives = 96/237 (40%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D V + AA V S P T TG L +L+A + S + A SS +
Sbjct: 92 DYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKS------FTYAASSSTY 145
Query: 84 GSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI-LFNHESPRRGENF 141
G P P+ E +P SPYA +K Y Y YG F G+ FN R+ N
Sbjct: 146 GDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYG-FETIGLRYFNVFGRRQDPNG 204
Query: 142 VTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMML---QQEKPDDYVVAT 198
+ I + G+ + SRD+ + + V+ + + K + Y VA
Sbjct: 205 AYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAV 264
Query: 199 EESHTVEEF---LEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWK 252
+ T+ + ++ + G+N + + R FR +V + + D SKA LG++
Sbjct: 265 GDRTTLNDLYFAIKDSLNANGINVNQNP--NYRDFRAGDVRHSQADVSKAVTRLGYQ 319
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 112 (44.5 bits), Expect = 0.00078, P = 0.00078
Identities = 60/237 (25%), Positives = 96/237 (40%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D V + AA V S P T TG L +L+A + S + A SS +
Sbjct: 92 DYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKS------FTYAASSSTY 145
Query: 84 GSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI-LFNHESPRRGENF 141
G P P+ E +P SPYA +K Y Y YG F G+ FN R+ N
Sbjct: 146 GDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYG-FETIGLRYFNVFGRRQDPNG 204
Query: 142 VTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMML---QQEKPDDYVVAT 198
+ I + G+ + SRD+ + + V+ + + K + Y VA
Sbjct: 205 AYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAV 264
Query: 199 EESHTVEEF---LEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWK 252
+ T+ + ++ + G+N + + R FR +V + + D SKA LG++
Sbjct: 265 GDRTTLNDLYFAIKDSLNANGINVNQNP--NYRDFRAGDVRHSQADVSKAVTRLGYQ 319
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 54/242 (22%), Positives = 95/242 (39%)
Query: 24 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMF 83
D++Y+LA+ + P T G L +L + R R A +SE++
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK-------RVGARLLLASTSEVY 206
Query: 84 GSTPP-PQSE-----TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 137
G PQ+E P PR+ Y K A Y + G+ +FN PR
Sbjct: 207 GDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 266
Query: 138 GENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVA 197
N R ++ + + G ++ G+ +R + + D V + ++ +
Sbjct: 267 HMND-GRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLG 324
Query: 198 TEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGF 257
E HT+ EF ++ VG + + + + + K D KA+ +LGW+P V
Sbjct: 325 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ----DDPQKRKPDIKKAKLMLGWEPVVPL 380
Query: 258 EQ 259
E+
Sbjct: 381 EE 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 290 290 0.00089 115 3 11 22 0.37 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 611 (65 KB)
Total size of DFA: 222 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.75u 0.12s 22.87t Elapsed: 00:00:01
Total cpu time: 22.76u 0.12s 22.88t Elapsed: 00:00:02
Start: Sat May 11 02:05:44 2013 End: Sat May 11 02:05:46 2013