Query 022918
Match_columns 290
No_of_seqs 338 out of 1954
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:18:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bga_A Beta-galactosidase; NYS 100.0 4.2E-54 1.4E-58 453.0 22.7 237 17-287 6-251 (1010)
2 3oba_A Beta-galactosidase; TIM 100.0 1.2E-53 3.9E-58 450.1 16.0 218 18-288 13-240 (1032)
3 1jz7_A Lactase, beta-galactosi 100.0 4.8E-53 1.6E-57 445.6 20.6 231 18-287 13-244 (1023)
4 1yq2_A Beta-galactosidase; gly 100.0 1.1E-48 3.8E-53 412.5 21.0 219 20-288 9-250 (1024)
5 3lpf_A Beta-glucuronidase; alp 100.0 2.8E-35 9.6E-40 296.2 20.7 183 85-287 10-208 (605)
6 3hn3_A Beta-G1, beta-glucuroni 100.0 6.9E-35 2.3E-39 293.6 14.7 184 86-287 15-230 (613)
7 3fn9_A Putative beta-galactosi 100.0 3.1E-33 1.1E-37 285.0 21.8 184 85-288 3-196 (692)
8 3cmg_A Putative beta-galactosi 100.0 9.2E-33 3.1E-37 280.7 22.2 172 87-288 4-184 (667)
9 3gm8_A Glycoside hydrolase fam 100.0 5.2E-33 1.8E-37 287.2 20.6 170 88-287 5-187 (801)
10 2vzs_A CSXA, EXO-beta-D-glucos 100.0 1.4E-32 4.7E-37 291.0 20.1 189 86-287 47-251 (1032)
11 2je8_A Beta-mannosidase; glyco 100.0 8.8E-30 3E-34 264.9 14.5 178 85-287 6-221 (848)
12 1tg7_A Beta-galactosidase; TIM 99.4 4.4E-12 1.5E-16 132.9 14.3 142 95-262 639-792 (971)
13 3og2_A Beta-galactosidase; TIM 99.2 2.6E-10 8.9E-15 118.8 14.0 106 113-234 672-785 (1003)
14 1tg7_A Beta-galactosidase; TIM 98.6 2.5E-07 8.4E-12 97.2 12.6 96 110-235 827-932 (971)
15 2okx_A Rhamnosidase B; alpha b 98.1 5.5E-06 1.9E-10 87.1 9.4 70 158-234 21-97 (956)
16 3d3a_A Beta-galactosidase; pro 97.0 0.002 7E-08 64.6 9.6 87 158-259 382-471 (612)
17 3og2_A Beta-galactosidase; TIM 96.8 0.0059 2E-07 64.0 10.9 73 158-234 882-963 (1003)
18 3d3a_A Beta-galactosidase; pro 96.0 0.013 4.6E-07 58.7 7.9 65 159-232 507-573 (612)
19 3cih_A Putative alpha-rhamnosi 95.5 0.017 5.7E-07 59.0 6.6 58 158-234 56-113 (739)
20 4e8d_A Glycosyl hydrolase, fam 94.5 0.11 3.7E-06 51.9 8.7 95 157-260 382-477 (595)
21 3thd_A Beta-galactosidase; TIM 93.3 0.088 3E-06 53.0 5.6 90 157-260 389-481 (654)
22 4e8d_A Glycosyl hydrolase, fam 92.1 0.36 1.2E-05 48.1 8.0 64 158-230 504-569 (595)
23 3thd_A Beta-galactosidase; TIM 90.2 0.9 3.1E-05 45.7 8.8 69 158-230 524-596 (654)
24 3pe9_A Fibronectin(III)-like m 83.8 3.4 0.00012 31.2 6.9 40 188-235 34-73 (98)
25 4hg6_B Cellulose synthase subu 76.5 9 0.00031 38.8 9.0 66 163-232 320-402 (707)
26 4hg6_B Cellulose synthase subu 64.2 8.6 0.00029 38.9 5.6 68 163-234 63-140 (707)
27 2okx_A Rhamnosidase B; alpha b 62.5 4.8 0.00016 42.1 3.6 100 108-233 160-264 (956)
28 1nkg_A Rhamnogalacturonase B; 59.8 18 0.0006 35.3 6.9 71 161-236 399-490 (508)
29 2vzp_A Aocbm35, EXO-beta-D-glu 59.5 40 0.0014 25.6 7.8 43 186-232 66-114 (127)
30 3pdd_A Glycoside hydrolase, fa 51.2 24 0.00082 29.3 5.6 53 175-235 108-165 (190)
31 2xjp_A Flocculin-5, flocculati 50.3 45 0.0016 29.4 7.4 39 157-198 121-159 (258)
32 3tew_A Protective antigen; pro 47.7 70 0.0024 32.2 8.9 64 158-234 60-123 (715)
33 2w3j_A Carbohydrate binding mo 46.0 65 0.0022 25.3 7.2 43 186-232 66-113 (145)
34 3pdd_A Glycoside hydrolase, fa 44.7 29 0.00098 28.9 5.0 41 187-234 32-72 (190)
35 3i2d_A E3 SUMO-protein ligase 43.2 26 0.00088 32.8 4.8 72 158-233 91-190 (371)
36 3fn9_A Putative beta-galactosi 39.9 29 0.001 34.9 5.0 53 175-233 597-652 (692)
37 2axw_A DRAD invasin; homodimer 38.9 42 0.0014 26.7 4.8 44 179-233 25-68 (134)
38 3flp_A SAP-like pentraxin; phy 35.2 46 0.0016 28.1 4.9 27 176-202 100-126 (217)
39 4dny_A Metalloprotease STCE; m 35.2 60 0.0021 25.6 5.1 55 163-218 64-120 (126)
40 2v73_A CBM40, putative EXO-alp 34.9 38 0.0013 28.6 4.2 70 176-261 108-177 (191)
41 4gq7_A Flocculin, LG-FLO1P; ca 33.4 85 0.0029 27.0 6.3 37 158-197 87-123 (224)
42 2yew_B E1 envelope glycoprotei 32.9 57 0.002 30.4 5.3 28 176-203 127-154 (427)
43 2bgo_A Endo-B1,4-mannanase 5C; 32.7 1.4E+02 0.0048 23.9 7.0 57 160-232 47-105 (140)
44 3cmg_A Putative beta-galactosi 31.9 59 0.002 32.3 5.7 50 175-231 589-641 (667)
45 2w47_A Lipolytic enzyme, G-D-S 31.4 1.4E+02 0.0047 23.1 6.9 43 186-232 67-115 (144)
46 2wz8_A Cellulosome protein doc 30.7 45 0.0015 26.8 3.9 42 186-231 85-131 (156)
47 4fo9_A E3 SUMO-protein ligase 29.5 71 0.0024 29.6 5.4 42 188-232 101-154 (360)
48 2kd2_A FAS apoptotic inhibitor 28.0 22 0.00075 26.7 1.4 25 174-200 20-44 (94)
49 2zzj_A Glucuronan lyase A; bet 26.7 1.9E+02 0.0065 25.1 7.4 75 158-236 65-163 (238)
50 3qde_A Cellobiose phosphorylas 25.1 1E+02 0.0035 31.5 6.2 31 188-231 780-810 (811)
51 2vmh_A GH95CBM51, fibronectin 24.9 1.2E+02 0.004 24.3 5.4 41 187-236 91-136 (151)
52 2chh_A Protein RSC3288; lectin 24.3 93 0.0032 24.0 4.3 64 166-233 6-69 (114)
53 2bv4_A Lectin CV-IIL; mannose; 24.2 94 0.0032 23.9 4.3 64 166-233 5-68 (113)
54 2eqm_A PHD finger protein 20-l 23.2 90 0.0031 22.7 4.0 33 162-195 35-67 (88)
55 3kqr_A Serum amyloid P-compone 21.5 62 0.0021 27.0 3.2 25 176-200 92-116 (204)
56 3pvn_A C-reactive protein; pen 21.5 62 0.0021 27.0 3.2 25 176-200 94-118 (206)
57 4b1m_A Levanase; hydrolase, CB 21.3 79 0.0027 25.8 3.8 30 174-203 130-159 (185)
58 2sli_A Intramolecular trans-si 21.1 72 0.0025 31.9 4.1 29 176-204 111-139 (679)
59 2wul_A Glutaredoxin related pr 21.1 50 0.0017 25.4 2.3 22 181-202 70-91 (118)
60 2xr4_A Lectin; sugar binding p 20.7 1.8E+02 0.006 22.5 5.2 64 166-233 6-71 (116)
No 1
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=100.00 E-value=4.2e-54 Score=452.95 Aligned_cols=237 Identities=36% Similarity=0.700 Sum_probs=218.1
Q ss_pred CCCCCCCccccccccCCCCCCccccCCHHHHhhhhhccccccccccCCccccchhhhhhhhhccccCCCCCceEecCccc
Q 022918 17 GYKVWEDPSFIKWRKRDPHVTLRCHDSVEGSLKYWYERNKVDISVSNSAVWDDDAVHEALTSAAFWTNGLPFVKSLSGHW 96 (290)
Q Consensus 17 ~~~~w~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~sLnG~W 96 (290)
..+.||||+|+++||||+||+|+||++.++|+... .+ ..++..++|||.|
T Consensus 6 ~~~~w~~~~v~~~nr~~~~a~~~~~~~~~~a~~~~-~~-----------------------------~~s~~~~~LnG~W 55 (1010)
T 3bga_A 6 PLPEWQSQYAVGLNKLAPHTYVWPYADASDIGKPG-GY-----------------------------EQSPYYMSLNGKW 55 (1010)
T ss_dssp -CCGGGCSSCCBSSCCCCCCCCCCCSCGGGGGSTT-GG-----------------------------GGSTTEEECCEEE
T ss_pred cccCCCCCcccccCCCCCCCCccCcCCHHHHhhcc-cc-----------------------------ccCceEEecCCCc
Confidence 34679999999999999999999999999887510 00 1246889999999
Q ss_pred eEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCC-------CCCCCCCCCC-CCeEEEEEEEE
Q 022918 97 KFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPF-------PLDPPNVPAE-NPTGCYRTYFH 168 (290)
Q Consensus 97 kF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~-------~~~pp~vp~~-~~~gwYrr~F~ 168 (290)
+|++.+.+...|++|+++++++++|..|.|||+|+++|++.|+|+|+.||| +.+||++|.+ ++++||||+|+
T Consensus 56 ~F~~~~~~~~~~~~~~~~~~~~s~W~~i~VP~~w~~~g~~~p~y~n~~~p~~~~~~~~~~~~p~vp~~~~~~~~Yrr~F~ 135 (1010)
T 3bga_A 56 KFNWVKNPDNRPKDFYQPSYYTGGWADINVPGNWERQGYGTAIYVNETYEFDDKMFNFKKNPPLVPFAENEVGSYRRTFK 135 (1010)
T ss_dssp EEEEEESGGGSCTTTTSTTSCCTTSEEEEESSCGGGGTSSCCEEESSSCTTSBGGGTBCCBTTBCCSTTCEEEEEEEEEE
T ss_pred cEEECCCcccCchhhhcCCCCcCCCeEEecCCcHHHcCCCCcccccccccccccccccccCCCCcccccCcEEEEEEEeE
Confidence 999998888889999999999999999999999999999999999999999 6799999866 99999999999
Q ss_pred cCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCcccCCCCCcc
Q 022918 169 IPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWL 248 (290)
Q Consensus 169 lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~ledqd~w~~ 248 (290)
+|+.|++++++|+|+||++.++|||||++||+|+++|+|++||||++|++ |+ |+|+|+|.+|++|+|+++||+|++
T Consensus 136 vp~~~~g~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~L~~---G~-N~L~V~V~~~~d~s~~e~~d~w~~ 211 (1010)
T 3bga_A 136 VPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTAAEWDITDVLSE---GE-NVVALEVYRWSSGAYLECQDMWRL 211 (1010)
T ss_dssp CCGGGTTSEEEEEESCEESEEEEEETTEEEEEEECSSSCEEEECGGGCCS---SE-EEEEEEEESCCGGGGGBCCSEEEC
T ss_pred eCcccCCCEEEEEECCCCceeEEEECCEEEeeEeCCCCcceeehhhhccC---CC-cEEEEEEEecCCCcccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999 95 999999999999999999999999
Q ss_pred ccccccceeeEecCccEEeEEEEEeec-CCceeEEEEEEE
Q 022918 249 SGIHRDVLLLAKPQVFIADYFFKSNLA-EDFSLADIQVNT 287 (290)
Q Consensus 249 sGI~RdV~L~~~p~~~I~D~~v~t~ld-~~~~~~~l~v~v 287 (290)
+||||+|+|+++|++||+|++|+++++ ++++.|+|+|++
T Consensus 212 sGI~R~V~L~~~p~~~I~d~~v~t~~~~~~~~~a~l~v~v 251 (1010)
T 3bga_A 212 SGIERDVYLYSTPKQYIADYKVSASLDKEKYKEGIFNLEV 251 (1010)
T ss_dssp CEECSCEEEEEECSSEEEEEEEEEEECTTTSCSEEEEEEE
T ss_pred CCcceEEEEEEeCCceEeeEEEEEeecccCCceEEEEEEE
Confidence 999999999999999999999999998 777777777655
No 2
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=100.00 E-value=1.2e-53 Score=450.10 Aligned_cols=218 Identities=37% Similarity=0.710 Sum_probs=203.7
Q ss_pred CCCCCCccccccccCCCCCCccccCCHHHHhhhhhccccccccccCCccccchhhhhhhhhccccCCCCCceEecCccce
Q 022918 18 YKVWEDPSFIKWRKRDPHVTLRCHDSVEGSLKYWYERNKVDISVSNSAVWDDDAVHEALTSAAFWTNGLPFVKSLSGHWK 97 (290)
Q Consensus 18 ~~~w~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~sLnG~Wk 97 (290)
.++||||+|+++||||||++|+| . ...++|||.|+
T Consensus 13 ~~~wenp~v~~~n~~~~~~~~~~-~--------------------------------------------~~~~sLnG~W~ 47 (1032)
T 3oba_A 13 PENLRNPKKVHENRLPTRAYYYD-Q--------------------------------------------DIFESLNGPWA 47 (1032)
T ss_dssp CGGGSCTTCCEESBCCCCCCCCC-T--------------------------------------------TTEEECCEEEE
T ss_pred hhhhcCCccceeCCCCCCCCcCC-c--------------------------------------------ccccccCCCee
Confidence 47999999999999999999987 1 03589999999
Q ss_pred EEeecCCCCCCcc----ccCCCCCCCCCeEecCCccccccc---CCCCcccccccCCCCCCCCCCCCCCeEEEEEEEEcC
Q 022918 98 FFLASSPPDVPLN----FHKSSFQDSKWEAIPVPSNWQMHG---FDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIP 170 (290)
Q Consensus 98 F~~~~~~~~~p~~----~~~~~~d~~~W~~i~VP~~w~~~g---~~~p~y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp 170 (290)
|++.+.+...|++ |+. ++.|+.|+|||+|+++| +|.|+|+|+.|||+.+||++|.++++|||||+|+||
T Consensus 48 F~~~~~~~~~~~~~~~~f~~----~~~W~~I~VP~~w~~~G~~~~~~p~Y~n~~ypf~~~pp~vp~~n~~g~Yrr~f~vp 123 (1032)
T 3oba_A 48 FALFDAPLDAPDAKNLDWET----AKKWSTISVPSHWELQEDWKYGKPIYTNVQYPIPIDIPNPPTVNPTGVYARTFELD 123 (1032)
T ss_dssp EEEESSGGGSCCTTSCCHHH----HTTSCEEEESCCTTSSGGGTTCCCEEESSSCSSCCBTTBCCSSCCEEEEEEEEEEC
T ss_pred EEEeCCcccCcccccccccc----cCCCcEEECCcCHHHCCCcccCCcceeecccCcCCCCCCCCCcCCeEEEEEEEEEC
Confidence 9999988877877 655 67899999999999999 999999999999999999999889999999999999
Q ss_pred CCC-CCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCcccCCCCCccc
Q 022918 171 KEW-QGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWLS 249 (290)
Q Consensus 171 ~~~-~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~ledqd~w~~s 249 (290)
+.| ++++++|+|+||++.++|||||++||+|+++|+|++||||++|+. | +|+|+|+|.+|++|+|+++||+|+++
T Consensus 124 ~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~lk~---G-~N~L~V~V~~~sd~s~~edqd~w~~s 199 (1032)
T 3oba_A 124 SKSIESFEHRLRFEGVDNCYELYVNGQYVGFNKGSRNGAEFDIQKYVSE---G-ENLVVVKVFKWSDSTYIEDQDQWWLS 199 (1032)
T ss_dssp HHHHHHEEEEEEESCEESEEEEEETTEEEEEEECTTSCEEEECTTTCCS---E-EEEEEEEEESCCGGGGGBCCSEEECC
T ss_pred chhcCCCEEEEEECCcceeEEEEECCEEEEEEeCCcccEEEEChhhccC---C-cEEEEEEEECCCCCCccCCCCcCccC
Confidence 999 999999999999999999999999999999999999999999998 8 59999999999999999999999999
Q ss_pred cccccceeeEecC-ccEEeEEEEEee-cCCceeEEEEEEEe
Q 022918 250 GIHRDVLLLAKPQ-VFIADYFFKSNL-AEDFSLADIQVNTC 288 (290)
Q Consensus 250 GI~RdV~L~~~p~-~~I~D~~v~t~l-d~~~~~~~l~v~v~ 288 (290)
||||+|+|+++|+ +||+|++|++++ +.++++|+|+|++.
T Consensus 200 GI~R~V~L~~~p~~~~I~d~~v~t~l~d~~~~~a~l~v~v~ 240 (1032)
T 3oba_A 200 GIYRDVSLLKLPKKAHIEDVRVTTTFVDSQYQDAELSVKVD 240 (1032)
T ss_dssp EECSCEEEEEEESSEEEEEEEEEEEESSTTCCSEEEEEEEE
T ss_pred ccceEEEEEEECCceEEeEEEEEeeecCCCCceEEEEEEEE
Confidence 9999999999999 999999999999 88887888777653
No 3
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=100.00 E-value=4.8e-53 Score=445.64 Aligned_cols=231 Identities=42% Similarity=0.814 Sum_probs=216.2
Q ss_pred CCCCCCccccccccCCCCCCccccCCHHHHhhhhhccccccccccCCccccchhhhhhhhhccccCCCCCceEecCccce
Q 022918 18 YKVWEDPSFIKWRKRDPHVTLRCHDSVEGSLKYWYERNKVDISVSNSAVWDDDAVHEALTSAAFWTNGLPFVKSLSGHWK 97 (290)
Q Consensus 18 ~~~w~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~sLnG~Wk 97 (290)
..+||||+|+++||||+||+|+||++.++|+.. ..++..++|||.|+
T Consensus 13 ~~~w~~~~~~~~nr~~~~a~~~~~~~~~~a~~~---------------------------------~~~~~~~~LnG~W~ 59 (1023)
T 1jz7_A 13 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTD---------------------------------RPSQQLRSLNGEWR 59 (1023)
T ss_dssp CCGGGCTTCSEESCCCCCSCCCCBSSHHHHHHT---------------------------------CCCTTEEECCEEEE
T ss_pred ccCccCCccccCCCCCCCCCEeccCCHHHHhcc---------------------------------cccceEEecCCCcc
Confidence 457999999999999999999999999988752 12467899999999
Q ss_pred EEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEEcCCCCC-CC
Q 022918 98 FFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQ-GR 176 (290)
Q Consensus 98 F~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp~~~~-~~ 176 (290)
|++.+.+...|++|+.++++++ ..|+|||+|+++|++.|+|+|+.|||+.+||++|..++++||||+|++|+.|+ ++
T Consensus 60 F~~~~~~~~~~~~~~~~~~~~~--~~i~VP~~w~~~g~~~p~y~n~~~p~~~~~p~~p~~~~~g~Yrr~F~vp~~~~~~~ 137 (1023)
T 1jz7_A 60 FAWFPAPEAVPESWLECDLPEA--DTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEG 137 (1023)
T ss_dssp EEEESSGGGSCTHHHHSCCTTC--EEEEESCCGGGGTSSCCEEESSSCSSCSCTTCCCSSCCEEEEEEEEEECHHHHHSS
T ss_pred EEecCCccccchhhhccCCCCC--cEEccCCcHHhCCCCCccccccccccccCCCccCCcCcEEEEEEEEEeCchhcCCC
Confidence 9999888778889999999877 89999999999999999999999999999999998899999999999999998 99
Q ss_pred eEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCcccCCCCCccccccccce
Q 022918 177 RILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVL 256 (290)
Q Consensus 177 ~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~ledqd~w~~sGI~RdV~ 256 (290)
+++|+|+||++.++|||||++||+|+++|+|++||||++|++ |+ |+|+|+|.+|++|+|+++||+|+++||||+|+
T Consensus 138 ~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~L~~---G~-N~L~V~V~~~~d~s~~e~qd~w~~sGI~R~V~ 213 (1023)
T 1jz7_A 138 QTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRA---GE-NRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVS 213 (1023)
T ss_dssp EEEEEESCEESEEEEEETTEEEEEEECTTSCEEEECTTTCCS---EE-EEEEEEEESCCGGGGGBCCSEEECCEECSCEE
T ss_pred EEEEEECCCCcceEEEECCEEEccccCCCCceEEecHhhccC---CC-cEEEEEEEecCCCCccccCCccccCCcCceEE
Confidence 999999999999999999999999999999999999999999 94 99999999999999999999999999999999
Q ss_pred eeEecCccEEeEEEEEeecCCceeEEEEEEE
Q 022918 257 LLAKPQVFIADYFFKSNLAEDFSLADIQVNT 287 (290)
Q Consensus 257 L~~~p~~~I~D~~v~t~ld~~~~~~~l~v~v 287 (290)
|+.+|++||+|++|+++++.+++.|.|+|++
T Consensus 214 L~~~p~~~I~d~~v~~~~~~~~~~a~v~v~v 244 (1023)
T 1jz7_A 214 LLHKPTTQISDFHVATRFNDDFSRAVLEAEV 244 (1023)
T ss_dssp EEEECSSEEEEEEEEEEECTTSSEEEEEEEE
T ss_pred EEEcCCceEeeEEEEEeccCCCceEEEEEEE
Confidence 9999999999999999999887778777765
No 4
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=100.00 E-value=1.1e-48 Score=412.46 Aligned_cols=219 Identities=39% Similarity=0.770 Sum_probs=206.3
Q ss_pred CCCCccccccc-cCCCCCCccccCCHHHHhhhhhccccccccccCCccccchhhhhhhhhccccCCCCCceEecCccceE
Q 022918 20 VWEDPSFIKWR-KRDPHVTLRCHDSVEGSLKYWYERNKVDISVSNSAVWDDDAVHEALTSAAFWTNGLPFVKSLSGHWKF 98 (290)
Q Consensus 20 ~w~~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~sLnG~WkF 98 (290)
..+||+ +++| |||+||+|+| . . ..++|||.|+|
T Consensus 9 ~~~~~~-~~~n~r~~~~a~~~~-~------~--------------------------------------~~~~LnG~W~F 42 (1024)
T 1yq2_A 9 YLTDQG-PGSGRRVPARSWLHS-D------A--------------------------------------PALSLNGDWRF 42 (1024)
T ss_dssp GGTCCS-SCEESBCCCCCCCEE-C------S--------------------------------------CEEECCEEEEE
T ss_pred ccCCCC-cccCcccCCCCCccC-C------C--------------------------------------cEeeCCCCccE
Confidence 457888 9999 9999999997 1 1 46899999999
Q ss_pred EeecCCC------------CCCccccCCCCCCCCCeEecCCccccccc---CCCCcccccccCCCCCCCCCCCCCCeEEE
Q 022918 99 FLASSPP------------DVPLNFHKSSFQDSKWEAIPVPSNWQMHG---FDRPIYTNVVYPFPLDPPNVPAENPTGCY 163 (290)
Q Consensus 99 ~~~~~~~------------~~p~~~~~~~~d~~~W~~i~VP~~w~~~g---~~~p~y~n~~yp~~~~pp~vp~~~~~gwY 163 (290)
++.+.+. ..|++|++++++++.|..|+|||+|+++| ++.|+|+|+.|||+.+||++|.+++++||
T Consensus 43 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~s~W~~i~VP~~w~~~g~~~~~~~~y~n~~~p~~~~~p~vp~~~~~~wY 122 (1024)
T 1yq2_A 43 RLLPAAPGTAGAGSVLPSGETVEGVAAESYDDAAWDTLPVPSHWVMGQDGKYGRPIYTNVQYPFPIDPPHVPDANPTGDF 122 (1024)
T ss_dssp EEESSCTTSGGGTTCSCTTCCTTGGGSTTCCCTTCEEEEESCCTTSSSTTTTCCCEEESSSCSSCSCTTCCCSCCCEEEE
T ss_pred EEcCCcccccccccccccccCcchhccCCCCccCCeEEecCchHHHCCCcccCCccccccccccccCCCCcCCcCceEEE
Confidence 9998877 78889999999999999999999999999 99999999999999999999988999999
Q ss_pred EEEEEcCCCC--CC-CeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCcc
Q 022918 164 RTYFHIPKEW--QG-RRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYL 240 (290)
Q Consensus 164 rr~F~lp~~~--~~-~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~l 240 (290)
||+|++|+.| ++ ++++|+|+||++.++|||||++||+|+++|+|++||||++|++ |+ |+|+|+|.+|++|+|+
T Consensus 123 rr~F~vp~~~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~gg~~p~~~DIT~~Lk~---G~-N~L~V~V~~~~d~~~~ 198 (1024)
T 1yq2_A 123 RRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRA---GS-NLLVVRVHQWSAASYL 198 (1024)
T ss_dssp EEEEEECGGGGSTTEEEEEEEESCEESCEEEEETTEEEEEECCTTSCEEEECTTTCCS---EE-EEEEEEEESSCGGGGG
T ss_pred EEEeEECchHhcCCCceEEEEECCCCceEEEEECCEEEEEEeCCccceEEecHHhccC---CC-cEEEEEEEecCCCCcc
Confidence 9999999999 88 9999999999999999999999999999999999999999999 95 9999999999999999
Q ss_pred cCCCCCccccccccceeeEecCccEEeEEEEEeec----CCceeEEEEEEEe
Q 022918 241 EDQDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLA----EDFSLADIQVNTC 288 (290)
Q Consensus 241 edqd~w~~sGI~RdV~L~~~p~~~I~D~~v~t~ld----~~~~~~~l~v~v~ 288 (290)
++||+|+++||||+|+|+.+|++||+|++|+++++ .+++.|.|+|++.
T Consensus 199 e~~d~w~~~GI~R~V~L~~~p~~~I~d~~v~~~~~~~~~~~~~~a~v~v~v~ 250 (1024)
T 1yq2_A 199 EDQDQWWLPGIFRDVTLQARPAGGITDAWLRTGWSARSGAGTGTIDPEITAD 250 (1024)
T ss_dssp BCCSEEECCEECSCEEEEEEETTCCSEEEEEEEEECCSSSCEEEEEEEEECC
T ss_pred ccCCccccCCcceEEEEEEcCCceEeeEEEEecccccccCcCceEEEEEEEE
Confidence 99999999999999999999999999999999998 7888899888763
No 5
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=100.00 E-value=2.8e-35 Score=296.24 Aligned_cols=183 Identities=27% Similarity=0.424 Sum_probs=156.3
Q ss_pred CCCceEecCccceEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEE
Q 022918 85 GLPFVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYR 164 (290)
Q Consensus 85 ~s~~~~sLnG~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYr 164 (290)
.+|..++|||.|+|.+.+.+.+.++.|+.+++++ +..|+||++|+.++.+.... ...|.+|||
T Consensus 10 ~~r~~~~LnG~W~f~~~~~~~g~~~~w~~~~~~~--~~~i~vP~~w~~~~~~~~~~---------------~~~G~~wY~ 72 (605)
T 3lpf_A 10 PTREIKKLDGLWAFSLDRENCGIDQRWWESALQE--SRAIAVPGSFNDQFADADIR---------------NYAGNVWYQ 72 (605)
T ss_dssp SCEEECCCCCEEEEEEESSCCTTTTTGGGSCCSS--CEEEESSSCSTTTTCCHHHH---------------TCCSEEEEE
T ss_pred CCcceecCCCCCCeEecCcccCccccccccCCCC--CCEeeCCcchhhcccCCCCC---------------ccceEEEEE
Confidence 4678899999999999998888889999888765 47999999999886543221 126899999
Q ss_pred EEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCC------CC
Q 022918 165 TYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSD------GS 238 (290)
Q Consensus 165 r~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d------gs 238 (290)
|+|++|+.|+++++.|+|+||++.++|||||++||+|+++|+|++||||++|++ |+.|+|+|+|.+..+ |.
T Consensus 73 ~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~p~~~dit~~l~~---G~nn~l~V~v~n~~~~~~~P~g~ 149 (605)
T 3lpf_A 73 REVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTPYVIA---GKSVRITVCVNNELNWQTIPPGM 149 (605)
T ss_dssp EEEECCTTCSSCEEEEEESCCBSEEEEEESSCEEEEECCSSSCEEEECGGGCCT---TSEEEEEEEEECCCCTTSSSCEE
T ss_pred EEEECCcccCCCEEEEEECCcceEEEEEECCEEEEEEcCCCCcceeechhhccC---CCeEEEEEEEecCCCcccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999 864589999987532 22
Q ss_pred cccC----------CCCCccccccccceeeEecCccEEeEEEEEeecCCceeEEEEEEE
Q 022918 239 YLED----------QDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLAEDFSLADIQVNT 287 (290)
Q Consensus 239 ~led----------qd~w~~sGI~RdV~L~~~p~~~I~D~~v~t~ld~~~~~~~l~v~v 287 (290)
++++ +|+|+++||||+|+|+++|++||+|++|+++++.+...+.|++++
T Consensus 150 ~~~~~~g~~k~~~~~d~~~~~GI~R~V~L~~~~~~~i~d~~v~~~~~~~~~~~~v~~~~ 208 (605)
T 3lpf_A 150 VITDENGKKKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQV 208 (605)
T ss_dssp EEECTTSCEEEEESSSBCCCCBCCSCEEEEEECSSEEEEEEEEECCSTTSCCCEEEEEE
T ss_pred ccccccCcccccccccccccCcccceEEEEEECCeeEeeeEEEEEEcCCccEEEEEEEE
Confidence 2222 478899999999999999999999999999998877777766654
No 6
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=100.00 E-value=6.9e-35 Score=293.55 Aligned_cols=184 Identities=22% Similarity=0.340 Sum_probs=149.9
Q ss_pred CCceEecCccceEEeecCCCC---CCccccCCCCCCC-CCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeE
Q 022918 86 LPFVKSLSGHWKFFLASSPPD---VPLNFHKSSFQDS-KWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTG 161 (290)
Q Consensus 86 s~~~~sLnG~WkF~~~~~~~~---~p~~~~~~~~d~~-~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~g 161 (290)
++..++|||.|+|++.+.+.. .++.|+..+++++ .|..|+||++|+..+.+...+ ...|.+
T Consensus 15 ~r~~~~LnG~W~F~~~~~~~~~~g~~~~w~~~~~~~~~~~~~i~vP~~w~~~~~~~~~~---------------~~~G~~ 79 (613)
T 3hn3_A 15 SRECKELDGLWSFRADFSDNRRRGFEEQWYRRPLWESGPTVDMPVPSSFNDISQDWRLR---------------HFVGWV 79 (613)
T ss_dssp TBCEEECCEEEEEEECCCTTSCHHHHTTGGGSCGGGGSCCEEEEESSCSTTTSCCHHHH---------------TCCSEE
T ss_pred CceeecCCCceeEEEcCcccccccccccceecCCcccCCCeEEecCCchhhcccCCCcc---------------CCceeE
Confidence 467899999999999876532 3456777766533 689999999998776543221 126788
Q ss_pred EEEEEEEcCCCCC---CCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCc---eEEEEEEEec-
Q 022918 162 CYRTYFHIPKEWQ---GRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKK---NVLAVQVFRW- 234 (290)
Q Consensus 162 wYrr~F~lp~~~~---~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~e---N~L~V~V~~~- 234 (290)
||||+|++|+.|. +++++|+|+||++.++|||||++||+|+++|+||+||||++|++ |++ |+|+|+|.+.
T Consensus 80 wYr~~f~~p~~~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~~~~dit~~l~~---g~~~~~n~l~V~v~n~~ 156 (613)
T 3hn3_A 80 WYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQV---GPLPSRLRITIAINNTL 156 (613)
T ss_dssp EEEEEECCCHHHHHCTTEEEEEEESCCCSEEEEEETTEEEEEEESSSSCEEEECHHHHCC---C---CCEEEEEEEECCC
T ss_pred EEEEEEEeCchhhhcCCCEEEEEECCcceEEEEEECCEEEeEEcCCcceEEEEChhhhcC---CCCCcceEEEEEEeCCC
Confidence 9999999999864 89999999999999999999999999999999999999999999 854 9999999853
Q ss_pred -------------------CCCCccc--CCCCCccccccccceeeEecCccEEeEEEEEeecCCceeEEEEEEE
Q 022918 235 -------------------SDGSYLE--DQDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLAEDFSLADIQVNT 287 (290)
Q Consensus 235 -------------------~dgs~le--dqd~w~~sGI~RdV~L~~~p~~~I~D~~v~t~ld~~~~~~~l~v~v 287 (290)
++|.+++ ++|+|+++||||+|+|+.+|++||+|++|+++++++.....+++++
T Consensus 157 ~~~~~p~g~~~~~~~~~~~~~g~~~~~~~~d~~~~~GI~r~V~L~~~~~~~i~~~~v~~~~~~~~~~v~~~~~~ 230 (613)
T 3hn3_A 157 TPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISV 230 (613)
T ss_dssp CTTSSSCCEEEECCCTTTSCTTCEEEECCSSSCCCCSCCSCEEEEEEESSEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CccccCCcccccccccccCCCcceeecccccceeccCcCceEEEEEECCeeEeeeEEEEEecCCcEEEEEEEEE
Confidence 2343333 6788999999999999999999999999999998875444444444
No 7
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=100.00 E-value=3.1e-33 Score=285.02 Aligned_cols=184 Identities=20% Similarity=0.320 Sum_probs=146.8
Q ss_pred CCCceEecCccceEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEE
Q 022918 85 GLPFVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYR 164 (290)
Q Consensus 85 ~s~~~~sLnG~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYr 164 (290)
..+..++||+.|+|+..+.... + ....+.++ +.|..++|||+|+..+.... . .....+++|||
T Consensus 3 ~~r~~~~ln~~W~F~~~~~~~~-~-~~~~~~~d-~~w~~v~vPh~w~~~~~~~~---~-----------~~~~~g~~wYr 65 (692)
T 3fn9_A 3 LARQVTAFNTGWQFKKGPFATD-P-MRAASQWD-GKWETVEIPHTWNAMDMQVQ---S-----------GSFYEGAGYYR 65 (692)
T ss_dssp CCCEEEECCSSCEEEECCCCSS-H-HHHHHHHH-SCCEECCSSCCSCTTTTTSS---S-----------SCCCCSEEEEE
T ss_pred CCcEEeeCCCCCeeEeCCcccc-c-cccccccC-CCCeEecCCcchhcCCcccC---C-----------CCCcceEEEEE
Confidence 3468899999999997531110 0 00001122 68999999999997642110 0 00137899999
Q ss_pred EEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCccc-CC
Q 022918 165 TYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLE-DQ 243 (290)
Q Consensus 165 r~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~le-dq 243 (290)
|+|++|+.|++++++|+|+||++.++|||||++||+|+++|+||+||||++|++ |++|+|+|+|.+++++++++ +|
T Consensus 66 ~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~f~~dIt~~l~~---G~~N~l~V~v~~~~~~~~~p~~~ 142 (692)
T 3fn9_A 66 KTQFFPHDLEGKRVFLRFEGVGACAEVYVNGKLAGTHKGGYSAFACEIGTALKL---GAENEIIVKADNKARPDVIPVNQ 142 (692)
T ss_dssp EEEEECGGGTTCEEEEEESCCBSEEEEEETTEEEEEEECTTSCEEEECGGGCCT---TEEEEEEEEEECCCCTTSSSCSS
T ss_pred EEEEECchhCCCeEEEEECCccEeeEEEECCEEeeeEcCCcceEEEEChHhcCC---CCceEEEEEEECCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999 85599999999999988888 88
Q ss_pred C-CCccccccccceeeEecCccEEe-------EEEEE-eecCCceeEEEEEEEe
Q 022918 244 D-HWWLSGIHRDVLLLAKPQVFIAD-------YFFKS-NLAEDFSLADIQVNTC 288 (290)
Q Consensus 244 d-~w~~sGI~RdV~L~~~p~~~I~D-------~~v~t-~ld~~~~~~~l~v~v~ 288 (290)
| +|+++||||+|+|+.+|++||+| ++|++ +++.+.+...+++++.
T Consensus 143 d~~~~~~GI~R~V~L~~~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~v~ 196 (692)
T 3fn9_A 143 NLFGVYGGIYRPVWLIVTEQNNITVTDCASPGVYITQKDVSKKSADITVKVKLD 196 (692)
T ss_dssp SSSCCCCBCCSCEEEEEECSEEECSCSTTCCSEEEEEESCSSSEEEEEEEEEEE
T ss_pred cccccCCCcceeEEEEEECCeEEecccccCCcEEEEeccccCCEEEEEEEEEEE
Confidence 9 78899999999999999999998 67765 6776554444445443
No 8
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=100.00 E-value=9.2e-33 Score=280.65 Aligned_cols=172 Identities=22% Similarity=0.297 Sum_probs=141.3
Q ss_pred CceEecCccceEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEEEE
Q 022918 87 PFVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTY 166 (290)
Q Consensus 87 ~~~~sLnG~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYrr~ 166 (290)
+..++|||.|+|++... ++ +.|..|+||++|+.+++... . +. ..++++||||+
T Consensus 4 r~~~~Lng~W~F~~~~~------------~~-~~w~~i~vP~~w~~~~~~~~---~--------~~---~~~g~~wYr~~ 56 (667)
T 3cmg_A 4 RQDILLNNNWNFRFSHQ------------VQ-GDTRRVDLPHTWNAQDALAG---K--------ID---YKRGIGNYEKA 56 (667)
T ss_dssp CEEEECCSCEEEEETTS------------TT-CCCEEECSSCCTTTTTGGGT---C--------TT---CCCSEEEEEEE
T ss_pred ceEeeCCCCcceeeCCC------------CC-CCCeEEecCChHHhcCCccC---C--------Cc---CcceeEEEEEE
Confidence 57899999999987431 12 67999999999997653110 0 00 13789999999
Q ss_pred EEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCC-CcccCCCC
Q 022918 167 FHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDG-SYLEDQDH 245 (290)
Q Consensus 167 F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dg-s~ledqd~ 245 (290)
|++|+.|++++++|+|+||++.++|||||++||+|.++|+||+||||++|++ |++|+|+|+|.+.... ...+++|+
T Consensus 57 f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~~~~dit~~l~~---G~~N~l~V~v~~~~~~~~~p~~~d~ 133 (667)
T 3cmg_A 57 LYIRPEWKGKRLFLRFDGVNSIADVFINRKHIGEHRGGYGAFIFEITDLVKY---GEKNSVLVRANNGEQLDIMPLVGDF 133 (667)
T ss_dssp EECCGGGTTSEEEEEESCCBSEEEEEETTEEEEEEECSSSCEEEECTTTSCT---TSEEEEEEEEECCCCSSSSCSSCSS
T ss_pred EECCcccCCCEEEEEECCccceeEEEECCEEEeeecCCcccEEEECCHHHCC---CCCcEEEEEEecCCCcccCCccCcc
Confidence 9999999999999999999999999999999999999999999999999999 8569999999986432 33467888
Q ss_pred CccccccccceeeEecCccEEe-------EEEEE-eecCCceeEEEEEEEe
Q 022918 246 WWLSGIHRDVLLLAKPQVFIAD-------YFFKS-NLAEDFSLADIQVNTC 288 (290)
Q Consensus 246 w~~sGI~RdV~L~~~p~~~I~D-------~~v~t-~ld~~~~~~~l~v~v~ 288 (290)
|+++||||+|+|+.+|++||+| ++|++ +++.+.+...+++++.
T Consensus 134 ~~~~GI~R~V~L~~~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~~~ 184 (667)
T 3cmg_A 134 NFYGGIYRDVHLLITDETCISPLDYASPGVYLVQEVVSPQEAKVCAKVNLS 184 (667)
T ss_dssp CCCCBCCSCEEEEEECSEEECSCSTTSCSEEEEEEEECSSEEEEEEEEEEE
T ss_pred cccCccCceEEEEEECCEEEeecccCCCceEEecccccCceEEEEEEEEEE
Confidence 9999999999999999999997 78888 7876544444444443
No 9
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=100.00 E-value=5.2e-33 Score=287.21 Aligned_cols=170 Identities=26% Similarity=0.485 Sum_probs=141.1
Q ss_pred ceEecCccceEEeecCCCCCCccc-cCCCCCCCCCeEecCCcccccccCCCCcccccccCCCC--CC-----CCCCCCCC
Q 022918 88 FVKSLSGHWKFFLASSPPDVPLNF-HKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPL--DP-----PNVPAENP 159 (290)
Q Consensus 88 ~~~sLnG~WkF~~~~~~~~~p~~~-~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~--~p-----p~vp~~~~ 159 (290)
..++|||.|+|++.+.+ ++ ++++|+++.|..|+|||+|+++| ||.. +. +.++ ++
T Consensus 5 ~~~~ln~~W~F~~~~~~-----~~~~~~~~dds~W~~v~vPh~w~i~~-----------pf~~~~~~~~~~~~~~~--~g 66 (801)
T 3gm8_A 5 ETINFCKGWKFHLGDAG-----KGASSSSYNDSQWRILNIPHDWSIEG-----------TYKQFENGTDWQSGFLP--AG 66 (801)
T ss_dssp EEEECCSSEEEEESCCC-----GGGGSSSCCCTTSEEECSSCCGGGGS-----------CCCSSTTSCCTTTTSCC--CE
T ss_pred eEeeCCCCCeEEECCCc-----cccccCCCCcCCCeEeCCCCchhhcC-----------CcCCcccCccccccCCc--Cc
Confidence 67899999999998754 23 67889999999999999999876 2211 11 2333 78
Q ss_pred eEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCc
Q 022918 160 TGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSY 239 (290)
Q Consensus 160 ~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~ 239 (290)
++||||+|++|+.|++++++|+|+||++.++|||||++||+|+++|+||+||||++|++ |+ |+|+|+|.+...
T Consensus 67 ~~wYrk~f~vp~~~~~~~v~L~f~gv~~~a~V~vNG~~vG~~~~g~~pf~~DIT~~Lk~---G~-N~L~V~V~n~~~--- 139 (801)
T 3gm8_A 67 ISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWINGHWLGKRPNGYISFVYDLTPYLQE---GK-NQIAVKVDHSKA--- 139 (801)
T ss_dssp EEEEEEEEECCSGGGSCEEEEEESCCBSCEEEEETTEEEEEECCSSCCEEEECGGGCCS---SE-EEEEEEEEECSC---
T ss_pred eEEEEEEEEcCcccCCCEEEEEECccceEEEEEECCEEeecccCCcccEEEECcHhccC---CC-cEEEEEEECCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999 95 999999998632
Q ss_pred ccCCCCCc--cccccccceeeEecCccEEeE--EEEE-eecCCceeEEEEEEE
Q 022918 240 LEDQDHWW--LSGIHRDVLLLAKPQVFIADY--FFKS-NLAEDFSLADIQVNT 287 (290)
Q Consensus 240 ledqd~w~--~sGI~RdV~L~~~p~~~I~D~--~v~t-~ld~~~~~~~l~v~v 287 (290)
.+++| .+||||+|+|+.+|++||+|+ +|++ .++. +.|.|+|++
T Consensus 140 ---~~~~w~~~~GI~R~V~L~~~~~~~I~~~gv~v~t~~~~~--~~a~v~v~~ 187 (801)
T 3gm8_A 140 ---LTGRWYTGSGIYRPVYLLVSNPTHIPYSGIHFRSKLQNK--QSATYTLSI 187 (801)
T ss_dssp ---CCCSSCCCCBCCSCEEEEEECSSBCCTTCEEEEEEEETT--TEEEEEEEE
T ss_pred ---CCCccccCCCeeeEEEEEEECCEEEecceEEEEecccCC--CeEEEEEEE
Confidence 12333 499999999999999999995 7765 4444 345555544
No 10
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=100.00 E-value=1.4e-32 Score=290.98 Aligned_cols=189 Identities=21% Similarity=0.256 Sum_probs=159.7
Q ss_pred CCceEecCccceEEeecCCCCCCccccCCCCCCCCCeEecCCccc-----ccccCCCCcccccccCCCCCCCCCCCCCCe
Q 022918 86 LPFVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNW-----QMHGFDRPIYTNVVYPFPLDPPNVPAENPT 160 (290)
Q Consensus 86 s~~~~sLnG~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w-----~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~ 160 (290)
++..++|||.|+|+....+... ++|..++++++.|..|.|||+| +..+++.|.|.+..++++. .+ .++.
T Consensus 47 ~~~~~~Lng~W~f~~~~~~~~~-~~~~~~~~~~~~W~~v~VP~~~~~~l~~~~~~~dp~y~~n~~~~~~----~~-~~~~ 120 (1032)
T 2vzs_A 47 AAGNATPIPGYVIQSSAQVSDD-SAVSKPGFPTSGWYPVSSRSTVYAGLLQNGKYADPFYSTNMQNVPA----AQ-FSVP 120 (1032)
T ss_dssp CTTCEEECCEEEEEEGGGCSCH-HHHTSTTCCCTTCEEEETTCBHHHHHHHTTCSCCTTSTTGGGGSCS----GG-GSSC
T ss_pred CccccccCCCceEEECCCCCcc-cccccCCCCCCCceECcCCchhhhhHHhcCCCCCCccccccccCCc----cc-cCcc
Confidence 4578999999999998765544 6788899999999999999999 6677888988877665531 11 2679
Q ss_pred EEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEee---eccCCCCceeeccccccccCCCCCceEEEEEEEecCC-
Q 022918 161 GCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVG---YSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSD- 236 (290)
Q Consensus 161 gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG---~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d- 236 (290)
+||||+|++ .++++++.|+|+||++.++|||||++|| .|+|+|+|++||||++|++ | +|+|+|+|.++.+
T Consensus 121 ~wYrr~f~v--~~~~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h~g~~~~~~~DIt~~l~~---G-~N~L~V~v~~~~~~ 194 (1032)
T 2vzs_A 121 WWYRTDLNV--DDTSSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITAQVHT---G-VNSVAFKVYPNDPN 194 (1032)
T ss_dssp EEEEEEEEE--SCCSSEEEEEECCEESBEEEEETTEEEECTTTSBSTTCCEEEECTTTCCS---E-EEEEEEEECCCCTT
T ss_pred EEEEEEEEE--eCCCCEEEEEECCcccceEEEECCEEecccccccCcceeEEEECcHHhCC---C-CcEEEEEEeCCCCC
Confidence 999999999 6789999999999999999999999998 4579999999999999999 9 5999999999875
Q ss_pred CCcccCC-CCC------ccccccccceeeEecCccEEeEEEEEeecCCceeEEEEEEE
Q 022918 237 GSYLEDQ-DHW------WLSGIHRDVLLLAKPQVFIADYFFKSNLAEDFSLADIQVNT 287 (290)
Q Consensus 237 gs~ledq-d~w------~~sGI~RdV~L~~~p~~~I~D~~v~t~ld~~~~~~~l~v~v 287 (290)
+.+.+.+ | | +.+||||+|+|+.+|++||+|++|+++++.+++.+.|+|++
T Consensus 195 ~~~~~g~~D-w~~~~~~~~sGI~r~V~L~~~~~~~I~d~~v~~~~~~~~~~~~v~v~~ 251 (1032)
T 2vzs_A 195 RDLSMGWID-WAQTPPDQNMGIVRDVLVRRSGAVALRSAHVIQKLNSALDHADLTVKA 251 (1032)
T ss_dssp TSSSCCCTT-TSCCCTTTTCEECSCEEEEEESSEEEEEEEEEEEECTTSSEEEEEEEE
T ss_pred ccccCCccc-cccCcCCCCCCcceeeEEEEcCCeEEeccEEEEeecCCCceEEEEEEE
Confidence 5555554 4 4 35899999999999999999999999998776677766654
No 11
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=99.96 E-value=8.8e-30 Score=264.91 Aligned_cols=178 Identities=21% Similarity=0.260 Sum_probs=136.0
Q ss_pred CCCceEecCccceEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCC-C---CCCCCCCCCe
Q 022918 85 GLPFVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPL-D---PPNVPAENPT 160 (290)
Q Consensus 85 ~s~~~~sLnG~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~-~---pp~vp~~~~~ 160 (290)
.++..++|||.|+|+.. +++.|..|.|||+|+...+.... +..||.. + .++++ ++.
T Consensus 6 ~~~~~~~Lng~W~f~~~---------------~~~~w~~~~VP~~~~~~l~~~~~---i~~P~~~~n~~~~~~~~--~~~ 65 (848)
T 2je8_A 6 DTSEVMLLDTGWEFSQS---------------GTEKWMPATVPGTVHQDLISHEL---LPNPFYGMNEKKIQWVE--NED 65 (848)
T ss_dssp CSCEEEECCSSCEEEET---------------TSCCCEECCSSCCHHHHHHHTTS---SCCTTSTTTTGGGGGGG--GSC
T ss_pred CCceEEECCCCeEEEEC---------------CCCCeeECcCCcHHHHhHHHcCC---cCCCccCcccccccccc--CCC
Confidence 45788999999999975 23579999999999765422111 1122211 1 11222 467
Q ss_pred EEEEEEEEcCCCC-CCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecC----
Q 022918 161 GCYRTYFHIPKEW-QGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWS---- 235 (290)
Q Consensus 161 gwYrr~F~lp~~~-~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~---- 235 (290)
+||||+|.+|+.| +++++.|+|+||++.++|||||++||.+.|+|+|++||||++|++ | +|+|+|+|.+..
T Consensus 66 ~~Yr~~f~~p~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~~~~dIt~~l~~---G-~N~L~V~v~~~~~~~~ 141 (848)
T 2je8_A 66 WEYRTSFIVSEEQLNRDGIQLIFEGLDTYADVYLNGSLLLKADNMFVGYTLPVKSVLRK---G-ENHLYIYFHSPIRQTL 141 (848)
T ss_dssp EEEEEEEEECHHHHTSSEEEEEESCCBSEEEEEETTEEEEEECBTTCCEEEECGGGCCS---E-EEEEEEEEECHHHHHH
T ss_pred EEEEEEEEcChhhcCCCeEEEEECCCCceeEEEECCEEeccccCCCCCEEEcChHhhcC---C-CcEEEEEEeCcchhhh
Confidence 8999999999876 799999999999999999999999999999999999999999999 9 599999998631
Q ss_pred ----CCCcc----cCCC---------------CC------ccccccccceeeEecCccEEeEEEEEeecCCceeEEEEEE
Q 022918 236 ----DGSYL----EDQD---------------HW------WLSGIHRDVLLLAKPQVFIADYFFKSNLAEDFSLADIQVN 286 (290)
Q Consensus 236 ----dgs~l----edqd---------------~w------~~sGI~RdV~L~~~p~~~I~D~~v~t~ld~~~~~~~l~v~ 286 (290)
++++. ++|+ +| ..+||||+|+|+.+|++||+|++|+++++++ +.|.|+|+
T Consensus 142 ~~~~~~~~~~P~~~~~~~~~~~~~~Rk~q~~~GWDWgP~~~~~GI~r~V~L~~~~~~~I~dv~v~~~~~~~-~~a~v~v~ 220 (848)
T 2je8_A 142 PQYASNGFNYPADNDHHEKHLSVFSRKAPYSYGWDWGIRMVTSGVWRPVTLRFYDIATISDYYVRQLSLTD-ENARLSNE 220 (848)
T ss_dssp HHHHHHSSCCCCTTSCSSSCGGGGSBSCGGGGCBTTBCCCCCCBCCSCEEEEEESSEEEEEEEEEEEEECS-SEEEEEEE
T ss_pred hhHhhcCccCCCCCCcccccccceeecccccCCcccCccCCCCCCceeeEEEEECCeEEEEeEEEEEecCC-ceEEEEEE
Confidence 11111 2222 14 3699999999999999999999999998765 45555544
Q ss_pred E
Q 022918 287 T 287 (290)
Q Consensus 287 v 287 (290)
+
T Consensus 221 ~ 221 (848)
T 2je8_A 221 L 221 (848)
T ss_dssp E
T ss_pred E
Confidence 3
No 12
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=99.36 E-value=4.4e-12 Score=132.91 Aligned_cols=142 Identities=17% Similarity=0.234 Sum_probs=104.3
Q ss_pred cceEEeecCCCCCCccccCCCCCCCCCeEecCCcccccccCCC-Cc--ccccccCCCCCCCCCCCCCCeEEEEEEEEcCC
Q 022918 95 HWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDR-PI--YTNVVYPFPLDPPNVPAENPTGCYRTYFHIPK 171 (290)
Q Consensus 95 ~WkF~~~~~~~~~p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~-p~--y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp~ 171 (290)
.|+|... . |+. .+.|+++.|..+.+|++|...+... |. | ...|-| ..|..|||++|+++.
T Consensus 639 ~Wk~~~~-~----pe~--~~~~dDs~W~~~~l~~~~n~~~p~t~p~~~~-~sdYGf---------~~G~lwYR~~F~~~~ 701 (971)
T 1tg7_A 639 KWKSVDT-L----PEA--KNTYDDSAWTSADHAYTNNSAHSLQTPTSLF-ASDYGY---------HTGALLFRGHFTANG 701 (971)
T ss_dssp CCEEEES-C----GGG--STTCCCTTSEECCCSSCCCTTCCCSSSSCCB-GGGGTC---------CSSCEEEEEEEECCS
T ss_pred CeEEeCC-C----ccc--cCCCCCCCceECCCcccccccCCCCCCccCC-CCccCc---------cCceEEEEEEEECCC
Confidence 4998864 2 222 5678999999999999998753211 21 1 112222 378899999999986
Q ss_pred CCCCCeEEEEeC---CccceeEEEEcCEEeeeccCCCC----ceeeccccccccCCCCCceEEEEEEEecCCC-Ccc-cC
Q 022918 172 EWQGRRILLHFE---AVDSAFCAWINGVPVGYSQDSRL----PAEFEISDYCYPHGSDKKNVLAVQVFRWSDG-SYL-ED 242 (290)
Q Consensus 172 ~~~~~~v~L~fe---gv~s~~~VwvNG~~VG~~~~~~~----p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dg-s~l-ed 242 (290)
+ ...|+|+ |+..+++|||||+++|.+.+++. .+.|++ ..|+. |++|+|+|.|.+.... ++- ..
T Consensus 702 ~----~~~L~~~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~---gg~NvI~Vlvdn~G~~nsWy~G~ 773 (971)
T 1tg7_A 702 K----EKTFFVQTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQS---GKNYVITVVIDNMGLDEDWTIGS 773 (971)
T ss_dssp C----CCEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCT---TCEEEEEEEECCCCCCCCCSBTC
T ss_pred c----ceEEEEEecCcccceEEEEECCEEEeeeecCCCcccCceEEEE-eEecC---CCceEEEEEEecCCCCcccccCc
Confidence 4 4589999 99999999999999999999998 899999 88988 6679999999975321 100 00
Q ss_pred CCCCccccccccceeeEecC
Q 022918 243 QDHWWLSGIHRDVLLLAKPQ 262 (290)
Q Consensus 243 qd~w~~sGI~RdV~L~~~p~ 262 (290)
..+.+.+||+ +|.|...+.
T Consensus 774 ~~~~~~~GI~-~v~L~g~~~ 792 (971)
T 1tg7_A 774 EDMKNPRGII-QYSLSGQEA 792 (971)
T ss_dssp CGGGCCCEEE-EEEETTSCG
T ss_pred cccccCCcce-EEEEeccCC
Confidence 0122459999 999987654
No 13
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=99.15 E-value=2.6e-10 Score=118.78 Aligned_cols=106 Identities=19% Similarity=0.339 Sum_probs=79.7
Q ss_pred CCCCCCCCCeEecCCccccccc-CCCC--cccccccCCCCCCCCCCCCCCeEEEEEEEEcCCCCCCCeEEEEeCCccc-e
Q 022918 113 KSSFQDSKWEAIPVPSNWQMHG-FDRP--IYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDS-A 188 (290)
Q Consensus 113 ~~~~d~~~W~~i~VP~~w~~~g-~~~p--~y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp~~~~~~~v~L~fegv~s-~ 188 (290)
+++|||+.|..+....+-+... ...| .|.. .|-| ..|.+|||++|+.+.. .+++.|.|+|... +
T Consensus 672 ~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~-dYGf---------h~G~~wYRG~F~a~~~--~~~v~L~~~GG~af~ 739 (1003)
T 3og2_A 672 RSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGS-DYGF---------HAGTLLFRGRFTARTA--RQQLFLSTQGGSAFA 739 (1003)
T ss_dssp STTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGG-GGTC---------CSSCEEEEEEEECSSS--SEEEEEEEECSTTCC
T ss_pred CCCCCcccceecCcccccCcccCCCCCcEeEcc-ccCc---------ccCCEEEeeEEECCCC--ceEEEEEEccccccc
Confidence 5688999998776555433211 1122 2221 3333 3799999999999864 3899999999999 8
Q ss_pred eEEEEcCEEeeecc-CCCC---ceeeccccccccCCCCCceEEEEEEEec
Q 022918 189 FCAWINGVPVGYSQ-DSRL---PAEFEISDYCYPHGSDKKNVLAVQVFRW 234 (290)
Q Consensus 189 ~~VwvNG~~VG~~~-~~~~---p~efDIT~~Lk~~~~G~eN~L~V~V~~~ 234 (290)
+.|||||++||.+. .++. .+.|+| +.|+. |++|+|+|+|++.
T Consensus 740 ~sVWLNG~flGs~~g~g~~~~~~~~~~l-P~L~~---g~~NVLtV~vDn~ 785 (1003)
T 3og2_A 740 SSVWLNDRFIGSFTGFDAASAANSSYTL-DRLVR---GRRYILTVVVDST 785 (1003)
T ss_dssp EEEEETTEEEEEECCCTTCSEEEEEEEE-CSCCT---TCEEEEEEEECCC
T ss_pred cEEEECCEEeccccCCCcccccceEEEC-CcccC---CCceEEEEEEeCC
Confidence 99999999999998 5565 688999 56888 7789999999985
No 14
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=98.60 E-value=2.5e-07 Score=97.23 Aligned_cols=96 Identities=20% Similarity=0.375 Sum_probs=75.1
Q ss_pred cccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEEcCCCCCC--CeEEEEeCCcc-
Q 022918 110 NFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQG--RRILLHFEAVD- 186 (290)
Q Consensus 110 ~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp~~~~~--~~v~L~fegv~- 186 (290)
+|+.+++++++|..+. |. .|.. ..++.|||++|+|+.. +| ..+.|.|++++
T Consensus 827 ~w~~p~~~~~~W~~~s-p~----~gl~--------------------~~Gv~wyr~~f~L~~p-~g~d~pl~L~lg~~~~ 880 (971)
T 1tg7_A 827 GFHQPQPPTQKWDSSS-PF----TGLT--------------------KPGIRFYSTSFDLDLP-SGYDIPLYFNFGNSTS 880 (971)
T ss_dssp TTTSSSCCCTTSBCCC-TT----TCBS--------------------SSEEEEEEEEEECCCC-TTEECCEEEEECCCCS
T ss_pred cccCCCCCcccccCCC-Cc----CCCC--------------------CCceEEEEEEEeccCC-CCCCceEEEEcCCCCC
Confidence 6888888888998774 43 1110 1578999999995443 33 35888889888
Q ss_pred ----ceeEEEEcCEEeeecc-CCCCceeecccc-cc-ccCCCCCceEEEEEEEecC
Q 022918 187 ----SAFCAWINGVPVGYSQ-DSRLPAEFEISD-YC-YPHGSDKKNVLAVQVFRWS 235 (290)
Q Consensus 187 ----s~~~VwvNG~~VG~~~-~~~~p~efDIT~-~L-k~~~~G~eN~L~V~V~~~~ 235 (290)
....|||||+.||... .-..+..|.|+. .| ++ |+ |+|+|+|.+..
T Consensus 881 ~~~~~~~~~~VNG~~iGry~~~~~pqr~y~VP~giLn~~---G~-N~i~vrv~~~~ 932 (971)
T 1tg7_A 881 TPAAYRVQLYVNGYQYGKYVNNIGPQTSFPVPEGILNYH---GT-NWLALSLWAQE 932 (971)
T ss_dssp SCCCEEEEEEETTEEEEEEETTTCSCCEEEECBTTBCTT---SE-EEEEEEEEECS
T ss_pred CCccceEEEEECCEEEeeecCCCCCCEEEECCHHHhCcC---Cc-cEEEEEEecCC
Confidence 7999999999999874 555778899998 88 77 85 99999999875
No 15
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=98.13 E-value=5.5e-06 Score=87.15 Aligned_cols=70 Identities=23% Similarity=0.414 Sum_probs=58.1
Q ss_pred CCeEEEEEEEEcCCCC-CCCeEEEEeCCccceeEEEEcCEEeeeccCCCC------ceeeccccccccCCCCCceEEEEE
Q 022918 158 NPTGCYRTYFHIPKEW-QGRRILLHFEAVDSAFCAWINGVPVGYSQDSRL------PAEFEISDYCYPHGSDKKNVLAVQ 230 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~-~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~------p~efDIT~~Lk~~~~G~eN~L~V~ 230 (290)
++..+|||+|+++... +..++.+...|+ +++||||+.||...+ ++ ...+|||++|++ |++|.|+|.
T Consensus 21 ~~~~~fRk~f~~~~~~~~~a~l~i~a~g~---y~~~iNG~~vg~~p~-~~~~~~~~y~~~Dvt~~L~~---G~~N~i~v~ 93 (956)
T 2okx_A 21 NEWRCFRGSFDAPASVEGPAMLHITADSR---YVLFVNGEQVGRGPV-RSWPKEQFYDSYDIGGQLRP---GVRNTIAVL 93 (956)
T ss_dssp TEEEEEEEEEECCSCCSSCCEEEEEEESE---EEEEETTEEEEEECC-CCBTTEEEEEEEECTTTCCT---TSEEEEEEE
T ss_pred CccceeEEEEECCCCccCceEEEEEecCc---EEEEECCEECCCCCC-ccccccccceEEechhhcCC---CCCcEEEEE
Confidence 5678999999999876 677888888775 699999999998765 33 377999999999 934999999
Q ss_pred EEec
Q 022918 231 VFRW 234 (290)
Q Consensus 231 V~~~ 234 (290)
|-+.
T Consensus 94 ~~~~ 97 (956)
T 2okx_A 94 VLHF 97 (956)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9664
No 16
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.03 E-value=0.002 Score=64.62 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=64.7
Q ss_pred CCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCC-
Q 022918 158 NPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSD- 236 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d- 236 (290)
.+..|||+++..+ +..-.|++.++...+.|||||+++|..........+.|+ +.. |. |+|.|.|.+-.-
T Consensus 382 ~gy~lY~t~i~~~----~~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~~~~--~~~---~~-~~L~iLven~Gr~ 451 (612)
T 3d3a_A 382 WGSILYRTSLSAS----DKEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVVKLP--PLK---EG-DRLDILVEAMGRM 451 (612)
T ss_dssp SSEEEEEEEECCB----SSCEEEEEEEEESEEEEEETTEEEEEEETTTTCCEEEEC--CBC---TT-EEEEEEEECCCCC
T ss_pred CCeEEEEEEecCC----CCCceEEecCCCeEEEEEECCEEEEEEEcccCCceEEee--cCC---CC-cEEEEEEEecCCC
Confidence 6789999999773 233478889999999999999999987765555556653 334 64 999999998642
Q ss_pred --CCcccCCCCCccccccccceeeE
Q 022918 237 --GSYLEDQDHWWLSGIHRDVLLLA 259 (290)
Q Consensus 237 --gs~ledqd~w~~sGI~RdV~L~~ 259 (290)
|.++ -..-||.++|.|..
T Consensus 452 NyG~~~-----~~~kGi~g~V~l~~ 471 (612)
T 3d3a_A 452 NFGKGI-----YDWKGITEKVELQS 471 (612)
T ss_dssp CSGGGG-----CCCCEEEEEEEEEE
T ss_pred ccCccc-----cCCCCCCcceEEcC
Confidence 3333 13489999999966
No 17
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=96.79 E-value=0.0059 Score=64.04 Aligned_cols=73 Identities=15% Similarity=0.272 Sum_probs=54.3
Q ss_pred CCeEEEEEEEEc--C-CCCCCCeEEEEeCCcc----ceeEEEEcCEEeeeccCCC-Cceeecccc-ccccCCCCCceEEE
Q 022918 158 NPTGCYRTYFHI--P-KEWQGRRILLHFEAVD----SAFCAWINGVPVGYSQDSR-LPAEFEISD-YCYPHGSDKKNVLA 228 (290)
Q Consensus 158 ~~~gwYrr~F~l--p-~~~~~~~v~L~fegv~----s~~~VwvNG~~VG~~~~~~-~p~efDIT~-~Lk~~~~G~eN~L~ 228 (290)
.+++|||++|.| | +.+ +-.+.|.|+... ..+.|||||=..|.-...- ...+|.|++ .|+.. | +|+|+
T Consensus 882 ~Gv~fyrt~f~LdlP~~g~-Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~iGPQt~FpvP~GILn~~--G-~Ntia 957 (1003)
T 3og2_A 882 AGIAFYAAKLPLHLPAQEY-DIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSNIGPQTEFPVPEGILDYN--G-DNWIG 957 (1003)
T ss_dssp SEEEEEEEEEEEECCTTTE-ECCEEEEECCCSSCCCEEEEEEETTEEEEEEETTTCCCCEEEECBTTBCTE--E-EEEEE
T ss_pred CceEEEEEEeecCCCcccC-ceeEEEEECCCCCCcceEEEEEEeceeeeeecCCCCCcceecCCcccccCC--C-cceEE
Confidence 689999999998 5 433 346788887643 5789999998888633222 346789988 88763 7 59999
Q ss_pred EEEEec
Q 022918 229 VQVFRW 234 (290)
Q Consensus 229 V~V~~~ 234 (290)
|.|-.-
T Consensus 958 lalWa~ 963 (1003)
T 3og2_A 958 VALWAL 963 (1003)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999764
No 18
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.01 E-value=0.013 Score=58.69 Aligned_cols=65 Identities=15% Similarity=0.300 Sum_probs=48.1
Q ss_pred CeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccC-CCCceeecccc-ccccCCCCCceEEEEEEE
Q 022918 159 PTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQD-SRLPAEFEISD-YCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 159 ~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~-~~~p~efDIT~-~Lk~~~~G~eN~L~V~V~ 232 (290)
+.+|||.+|++|+ +..++|.+.|- ....|||||+-||.--. +=...-| |+. +||+ |+ |+|+|-=.
T Consensus 507 ~p~~yk~~f~~~~---~~Dt~Ld~~g~-gKG~vwVNG~nlGRYW~~GPqqtlY-vP~~~Lk~---g~-N~ivvfE~ 573 (612)
T 3d3a_A 507 QPAYYRSTFNLNE---LGDTFLNMMNW-SKGMVWVNGHAIGRYWEIGPQQTLY-VPGCWLKK---GE-NEIIILDM 573 (612)
T ss_dssp CCEEEEEEEEESS---CCBEEEECTTC-CEEEEEETTEEEEEEETTCSCCEEE-ECGGGCCS---EE-EEEEEEES
T ss_pred CCEEEEEEEECCC---CCcEEEecCCC-CcEEEEECCEeEEeEEecCCEEEEE-ecHHHcCC---CC-cEEEEEEE
Confidence 5689999999985 35699999994 67889999999996431 1111234 765 8998 84 99877543
No 19
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.55 E-value=0.017 Score=58.97 Aligned_cols=58 Identities=7% Similarity=0.106 Sum_probs=43.0
Q ss_pred CCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEec
Q 022918 158 NPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRW 234 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~ 234 (290)
.+...+||+|.++.. .++.+. ....+++||||+.||. ++-+-+|+. |+ |.|.|.|-+.
T Consensus 56 ~~~~~~rk~f~~~~~---a~l~i~---a~G~ye~~iNG~~vg~---------y~~r~~L~~---G~-N~i~v~lg~g 113 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP---EEVFIA---AEGTYNVKLDGKLQFG---------MPETLLLPA---GK-HSLNIKVWNQ 113 (739)
T ss_dssp CSEEEEEEEEEESSC---EEEEEE---EESEEEEEETTEECSS---------CCSEEEECS---EE-EEEEEEEECS
T ss_pred CcceeEEEEEEcCCC---cEEEEE---EcCcEEEEECCEEccC---------CCCceEecC---Cc-eEEEEEEEeC
Confidence 356889999999763 455554 3557999999999993 222236888 94 9999999764
No 20
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=94.51 E-value=0.11 Score=51.86 Aligned_cols=95 Identities=12% Similarity=-0.029 Sum_probs=60.7
Q ss_pred CCCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCC
Q 022918 157 ENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSD 236 (290)
Q Consensus 157 ~~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d 236 (290)
..|...||+++..+. ..-.|++.++...+.|||||++||.-........+.|+ +.. +..++|.|.|.|...
T Consensus 382 ~~GyvlY~t~i~~~~----~~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i~~~--~~~---~~~~~L~ILVEN~GR 452 (595)
T 4e8d_A 382 SYGYLLYRTETNWDA----EEERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDIFYQ--GKK---KGLSRLDILIENMGR 452 (595)
T ss_dssp CSSEEEEEEEEECSS----SSEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCEEEC--CCS---SSEEEEEEEEECCCC
T ss_pred CcCeEEEEeccCCCC----CCceeecCCCceEEEEEECCEEEEEEEcccCcceEEee--cCC---CCCCEEEEEEEcCCC
Confidence 367889999997542 34567899999999999999999986432222334443 222 312799999998643
Q ss_pred CCcccCC-CCCccccccccceeeEe
Q 022918 237 GSYLEDQ-DHWWLSGIHRDVLLLAK 260 (290)
Q Consensus 237 gs~ledq-d~w~~sGI~RdV~L~~~ 260 (290)
-.|-..- ..-..-||..+|+|-..
T Consensus 453 vNyG~~~~~~~~~KGi~g~V~l~~~ 477 (595)
T 4e8d_A 453 VNYGHKFLADTQRKGIRTGVCKDLH 477 (595)
T ss_dssp CCSGGGTTCGGGSCEEEEEEEETTE
T ss_pred cccCcccCcCCCCCCCCCCeEECCE
Confidence 2221110 00124788888888543
No 21
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=93.33 E-value=0.088 Score=53.00 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=59.3
Q ss_pred CCCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCC
Q 022918 157 ENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSD 236 (290)
Q Consensus 157 ~~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d 236 (290)
..|...||+++..+.. .+..+.|.+.++...++|||||++||.-... ....+.|+ .+. | ++|.|.|.|...
T Consensus 389 ~~GyvlY~t~i~~~~~-~~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~-~~~~l~~~--~~~---~--~~L~ILVEN~GR 459 (654)
T 3thd_A 389 HYGFVLYRTTLPQDCS-NPAPLSSPLNGVHDRAYVAVDGIPQGVLERN-NVITLNIT--GKA---G--ATLDLLVENMGR 459 (654)
T ss_dssp CSSEEEEEEECSSCEE-EEEEEECTTCCEESEEEEEETTEEEEEEETT-TBCEEEEE--ECT---T--CEEEEEEECCCC
T ss_pred CcCeEEEEeecCCCCC-CCcceeeccCCcceEEEEEECCEEEEEEecc-cceeEecc--CCC---C--CEEEEEEEcCCc
Confidence 4688899998754311 1223445679999999999999999986532 22344444 233 3 789999998643
Q ss_pred ---CCcccCCCCCccccccccceeeEe
Q 022918 237 ---GSYLEDQDHWWLSGIHRDVLLLAK 260 (290)
Q Consensus 237 ---gs~ledqd~w~~sGI~RdV~L~~~ 260 (290)
|..+.+ .-||..+|+|-..
T Consensus 460 vNyG~~i~d-----~KGi~g~V~l~~~ 481 (654)
T 3thd_A 460 VNYGAYIND-----FKGLVSNLTLSSN 481 (654)
T ss_dssp BCSSGGGCC-----CCEECSCCEETTE
T ss_pred cccCCCCCC-----CCCCCCceEECCE
Confidence 223321 4788888888543
No 22
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=92.07 E-value=0.36 Score=48.13 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=46.5
Q ss_pred CCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCce-eecccc-ccccCCCCCceEEEEE
Q 022918 158 NPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPA-EFEISD-YCYPHGSDKKNVLAVQ 230 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~-efDIT~-~Lk~~~~G~eN~L~V~ 230 (290)
.+-++||-+|.+++ -...+|.+.|- ....|||||.-+|.--. .-|. ..=|+. +||+ |+ |+|+|-
T Consensus 504 ~~P~fy~g~f~~~~---~~DTfLd~~gw-gKG~v~VNG~nLGRYW~-~GPQ~tLYvP~~~Lk~---G~-NeIvvf 569 (595)
T 4e8d_A 504 GQPAFYAYDFTVEE---PKDTYLDLSEF-GKGVAFVNGQNLGRFWN-VGPTLSLYIPHSYLKE---GA-NRIIIF 569 (595)
T ss_dssp TSCEEEEEEEEESS---CCBEEEECTTC-CEEEEEETTEEEEEEET-TCSBCEEEECGGGSCS---EE-EEEEEE
T ss_pred CCCeEEEEEEEcCC---CCCEEEeCCCC-ceEEEEECCeeeecccC-CCCeEEEEecHHHhCc---CC-ceEEEE
Confidence 44599999999954 36899999995 56789999999997432 2232 222554 8999 94 987754
No 23
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=90.21 E-value=0.9 Score=45.73 Aligned_cols=69 Identities=20% Similarity=0.304 Sum_probs=47.5
Q ss_pred CCeEEEEEEEEcCCCC--CCCeEEEEeCCccceeEEEEcCEEeeeccCCCCcee-ecccc-ccccCCCCCceEEEEE
Q 022918 158 NPTGCYRTYFHIPKEW--QGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAE-FEISD-YCYPHGSDKKNVLAVQ 230 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~--~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~e-fDIT~-~Lk~~~~G~eN~L~V~ 230 (290)
.+-+.||-+|.|+..- .-+..+|.+.|- ....|||||.-+|.--...-|.. .=|+. +||+ |++|+|+|-
T Consensus 524 ~~P~fy~g~f~i~~~~~~~p~DTFLd~~gW-gKGvV~VNG~NLGRYW~~~GPQ~TLYvP~p~Lk~---G~~NeIiVf 596 (654)
T 3thd_A 524 TLPAFYMGNFSIPSGIPDLPQDTFIQFPGW-TKGQVWINGFNLGRYWPARGPQLTLFVPQHILMT---SAPNTITVL 596 (654)
T ss_dssp CCCEEEEEEECCCSSCTTCSCBEEEECTTC-CSEEEEETTEEEEEECTTTCSCCCEEECGGGCCS---SSCEEEEEE
T ss_pred CCCEEEEEEEEccCCCCCCCCCEEEeCCCC-CeEEEEECCcccccccCCCCCeEEEEecHHHhCC---CCCceEEEE
Confidence 4568999999997531 125799999995 56789999999997542222321 22443 8888 734987654
No 24
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=83.83 E-value=3.4 Score=31.23 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=33.1
Q ss_pred eeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecC
Q 022918 188 AFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWS 235 (290)
Q Consensus 188 ~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~ 235 (290)
..++|+||..+|.. ...||.|..+.. . | ...|.++.....
T Consensus 34 kVef~vdg~~vg~d--t~apy~~~w~~~--~---G-~htl~a~AtD~~ 73 (98)
T 3pe9_A 34 RVDFLVDGEVIGSD--REAPYEYEWKAV--E---G-NHEISVIAYDDD 73 (98)
T ss_dssp EEEEEETTEEEEEE--CSSSEEEEEECC--S---E-EEEEEEEEEETT
T ss_pred EEEEEECCEEeccc--ccCCEEEEEEcC--C---c-cEEEEEEEEECC
Confidence 56899999999984 568999998865 6 8 499999999763
No 25
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=76.52 E-value=9 Score=38.75 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=49.1
Q ss_pred EEEEEEcCCC---CCCCeEEEEeCCc-------cceeEEEEcCEEeeec------cCCCCceeecccc-ccccCCCCCce
Q 022918 163 YRTYFHIPKE---WQGRRILLHFEAV-------DSAFCAWINGVPVGYS------QDSRLPAEFEISD-YCYPHGSDKKN 225 (290)
Q Consensus 163 Yrr~F~lp~~---~~~~~v~L~fegv-------~s~~~VwvNG~~VG~~------~~~~~p~efDIT~-~Lk~~~~G~eN 225 (290)
-+-.|.+|.+ |.+..+.|++... +|.-.|+|||++|+.- .+.....++.|.. +++. | .|
T Consensus 320 i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~SlPL~~~~~g~~~~~~IpLPp~ll~~---g-~N 395 (707)
T 4hg6_B 320 RDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVRMLPLDRDAAPVKPRLDIRFPARLLHP---G-PN 395 (707)
T ss_dssp EEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEEEEESSSCCBSSCCCEEEEEEGGGCCS---S-EE
T ss_pred ceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEEEEEcCcccCCccceeEeecCHHHcCC---C-Cc
Confidence 4666778887 4567777777654 4788999999999862 2335667888875 5777 7 59
Q ss_pred EEEEEEE
Q 022918 226 VLAVQVF 232 (290)
Q Consensus 226 ~L~V~V~ 232 (290)
+|.+++.
T Consensus 396 qL~FeF~ 402 (707)
T 4hg6_B 396 RLSFESV 402 (707)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999986
No 26
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=64.24 E-value=8.6 Score=38.92 Aligned_cols=68 Identities=12% Similarity=0.131 Sum_probs=46.3
Q ss_pred EEEEEEcCCCCCCCeEEEEeC------CccceeEEEEcCEEeeec----cCCCCceeeccccccccCCCCCceEEEEEEE
Q 022918 163 YRTYFHIPKEWQGRRILLHFE------AVDSAFCAWINGVPVGYS----QDSRLPAEFEISDYCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 163 Yrr~F~lp~~~~~~~v~L~fe------gv~s~~~VwvNG~~VG~~----~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~ 232 (290)
..-.|.+++.-.+-++.|.+. -..|.-.|+|||+.||.- .+.....+++|...+.. | .|.|.+++.
T Consensus 63 ~~~~f~l~~vVt~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGtlpl~~~~~~~~~~i~Ipp~l~~---g-fN~L~fe~i 138 (707)
T 4hg6_B 63 AAFRLFLPTEAVGGTLTLAQRSSIDILPESSQIIVRMNDQEIGRFTPRQFGALGAVTMPLGEAVRA---G-DNLVTIEAQ 138 (707)
T ss_dssp EEEEEECSSCCTTCCBBCEEECSSCCCBTTBEEEEEETTEEEEEECCCCCSSCCCBCCCCCSSSCS---S-EEEEEEEEE
T ss_pred eeEEEEccchheeEEEEEEEeeCccccCccceEEEEECCEEEEEEecCCCCCceeEEEecChHHcC---C-cceEEEEEc
Confidence 334455665333444444432 124788999999999974 34456789999987777 8 599999987
Q ss_pred ec
Q 022918 233 RW 234 (290)
Q Consensus 233 ~~ 234 (290)
..
T Consensus 139 gh 140 (707)
T 4hg6_B 139 HR 140 (707)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 27
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=62.45 E-value=4.8 Score=42.06 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=53.9
Q ss_pred CccccCCCCCCCCCeEecCCcccccccCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEEcCCCCCCCeEEEEeCCccc
Q 022918 108 PLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDS 187 (290)
Q Consensus 108 p~~~~~~~~d~~~W~~i~VP~~w~~~g~~~p~y~n~~yp~~~~pp~vp~~~~~gwYrr~F~lp~~~~~~~v~L~fegv~s 187 (290)
+.+|..++|+++.|..+.+-+.. |. .|+. ..++ .+.--.|++|..|.. -..++.-+ -.
T Consensus 160 ~~gW~~~~fdd~~W~~a~~~~~~---g~---------~p~~---~l~~--~~~p~~~~~~~~~~~----v~~~~~~~-~~ 217 (956)
T 2okx_A 160 AEDWALPAFDDGGWAQARSIGPA---GT---------APWT---SLVP--RDIPFLTEEKLYPAS----IQSLSRVK-AP 217 (956)
T ss_dssp CTTTTSTTCCCTTSEECEEEEET---TC---------TTCC---EEEE--CSSCCCCCEEECCSE----EEEEEEEE-CC
T ss_pred CCCCccCCCCcccCccceEecCC---CC---------CCcc---cccc--CcCccccccccCccc----eeeccccc-cc
Confidence 56788899999999876433211 10 0110 0000 111123667777642 11233211 23
Q ss_pred eeEEEEcCEEeeeccC--CCCc---eeeccccccccCCCCCceEEEEEEEe
Q 022918 188 AFCAWINGVPVGYSQD--SRLP---AEFEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 188 ~~~VwvNG~~VG~~~~--~~~p---~efDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
..+++|||+.+..... -..+ ..||+|.+++. | +|.|.|.+-+
T Consensus 218 ~y~~~~n~~~~~~p~~~~~~~~~~y~~y~~t~~~~~---~-~~~~~~~~~~ 264 (956)
T 2okx_A 218 KYAAALDLRNQMVPESVNHANPVSYCGYVATILTLE---T-SGVVTLGFPT 264 (956)
T ss_dssp SEEEEECHHHHHCGGGGGCCSCEEECCEEEEEEEES---S-CEEEEEEETT
T ss_pred ceeEEEcchhhcCcccccccCchhhcceeeeeeeec---C-CceEEEEecC
Confidence 5789999994422110 0011 23689999998 8 5999999865
No 28
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=59.80 E-value=18 Score=35.30 Aligned_cols=71 Identities=14% Similarity=-0.007 Sum_probs=44.2
Q ss_pred EEEEEEEEcCCCCCCCeEEEE----eCCccceeEEEEcCEEe--------eec--------cCCCCceeecccc-ccccC
Q 022918 161 GCYRTYFHIPKEWQGRRILLH----FEAVDSAFCAWINGVPV--------GYS--------QDSRLPAEFEISD-YCYPH 219 (290)
Q Consensus 161 gwYrr~F~lp~~~~~~~v~L~----fegv~s~~~VwvNG~~V--------G~~--------~~~~~p~efDIT~-~Lk~~ 219 (290)
.--+-.|.+++.. .+...|+ ..-+.....|.|||..- +.+ .|-+.-++|+|+. .|+.
T Consensus 399 ~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~qV~VN~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~- 476 (508)
T 1nkg_A 399 NPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQATINSYTGSAPAAPTNLDSRGVTRGAYRGLGEVYDVSIPSGTIVA- 476 (508)
T ss_dssp CCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEEEEETTEECCCCCCCCCCCSCCGGGTCCCSCCCEEEEEECTTSSCS-
T ss_pred CcEEEEEEcCccc-CCceEEEEEehhhccCCCeEEEECCcCCcCccccccCCCCeEEecceeeeeEEEEEEEcHHHeec-
Confidence 3445668887643 2333343 22223557999998511 110 2445668899987 8888
Q ss_pred CCCCceEEEEEEEecCC
Q 022918 220 GSDKKNVLAVQVFRWSD 236 (290)
Q Consensus 220 ~~G~eN~L~V~V~~~~d 236 (290)
| +|+|.+.+.+-+.
T Consensus 477 --G-~NtI~lt~~~~s~ 490 (508)
T 1nkg_A 477 --G-TNTITINVISGSS 490 (508)
T ss_dssp --E-EEEEEEEEECSCC
T ss_pred --C-ceEEEEEeccCCC
Confidence 9 5999999976543
No 29
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=59.49 E-value=40 Score=25.62 Aligned_cols=43 Identities=9% Similarity=-0.095 Sum_probs=26.6
Q ss_pred cceeEEEEcCEEeee-----ccCCCC-ceeeccccccccCCCCCceEEEEEEE
Q 022918 186 DSAFCAWINGVPVGY-----SQDSRL-PAEFEISDYCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 186 ~s~~~VwvNG~~VG~-----~~~~~~-p~efDIT~~Lk~~~~G~eN~L~V~V~ 232 (290)
.....|+|||..++. ..++.. -.+..++=.|++ |. |+|.+...
T Consensus 66 ~~~~~l~VnG~~~~~~v~~p~tg~W~~w~~~~~~v~L~a---G~-ntI~l~~~ 114 (127)
T 2vzp_A 66 SRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVTLAA---GV-NKIKAVAT 114 (127)
T ss_dssp CCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECS---EE-EEEEEEEC
T ss_pred CeEEEEEECCEEeeeEEEecCCCCCCceEEEEEEEEECC---Cc-eEEEEEEe
Confidence 456789999998753 112211 122333335788 95 99999874
No 30
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=51.20 E-value=24 Score=29.34 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=38.9
Q ss_pred CCeEEEEeCCcc-----ceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecC
Q 022918 175 GRRILLHFEAVD-----SAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWS 235 (290)
Q Consensus 175 ~~~v~L~fegv~-----s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~ 235 (290)
+..+.|.....+ ...++|+||..||... -.||.|..+. .. | .+.|.++.....
T Consensus 108 ~~~vtl~~~AsD~~g~V~~Ve~~~dg~~v~t~t--~~~y~~~~~~--~~---G-~~tl~a~A~D~a 165 (190)
T 3pdd_A 108 NEFLKITATASDSDGKISRVDFLVDGEVIGSDR--EAPYEYEWKA--VE---G-NHEISVIAYDDD 165 (190)
T ss_dssp TSEEEEEEEEECSSSCEEEEEEEETTEEEEEEC--SSSEEEEEEC--CS---E-EEEEEEEEEETT
T ss_pred CCeEEEEEEEECCCCcEEEEEEEECCEEEeccc--CCCEEEEEec--CC---e-eEEEEEEEEECC
Confidence 556777765443 3458899999999853 4688888776 55 8 599999998753
No 31
>2xjp_A Flocculin-5, flocculation protein FLO5; cell adhesion, greenbeard, PA14-domain, carbohydrate binding interaction; HET: MAN BMA; 0.95A {Saccharomyces cerevisiae} PDB: 2xjq_A 2xjr_A* 2xjs_A* 2xjt_A* 2xju_A* 2xjv_A*
Probab=50.33 E-value=45 Score=29.43 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=33.2
Q ss_pred CCCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEe
Q 022918 157 ENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPV 198 (290)
Q Consensus 157 ~~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~V 198 (290)
.+-..-|+-.|.-|+ ...+.+.|..++..+.|||||+.+
T Consensus 121 snFSv~~tGyF~Pp~---TG~YtF~l~~aDD~~~L~vggk~a 159 (258)
T 2xjp_A 121 TNVTLEMTGYFLPPQ---TGSYTFSFATVDDSAILSVGGSIA 159 (258)
T ss_dssp TSEEEEEEEEECCSS---SEEEEEEESCCBSEEEEEESBTTT
T ss_pred ccEEEEEEEEEECCC---CeEEEEEEEecCCeEEEEECCeee
Confidence 466788999998765 478999999888899999999887
No 32
>3tew_A Protective antigen; protein transport, toxin; HET: MXE; 1.45A {Bacillus anthracis} SCOP: f.11.1.1 PDB: 3tex_A 3tey_A 3q8b_A 3q8a_A 1t6b_X 4ee2_A 1acc_A 3q8e_A 3q8c_A 3tez_A 3mhz_A* 3q8f_A* 3kwv_A 3hvd_A 1tzo_A 1tzn_A 3etb_J 3ino_A
Probab=47.67 E-value=70 Score=32.23 Aligned_cols=64 Identities=11% Similarity=0.119 Sum_probs=45.6
Q ss_pred CCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEec
Q 022918 158 NPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRW 234 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~ 234 (290)
.-..-|+-.|..|+ ...+.+.+.+. ..++|||||+.|-... ...+.| .|.+ |+...|.|+....
T Consensus 60 ~FSVRWTG~LtPpe---SG~YtF~LssD-GgaRLyIDGKLVIDnW----~~s~tV--~LeA---GK~Y~IRVEY~e~ 123 (715)
T 3tew_A 60 FQSAIWSGFIKVKK---SDEYTFATSAD-NHVTMWVDDQEVINKA----SNSNKI--RLEK---GRLYQIKIQYQRE 123 (715)
T ss_dssp CCEEEEEEEEECSS---CEEEEEEETTG-GGEEEEETTEEEEESS----CCCCCE--EECT---TCEEEEEEEEECS
T ss_pred cEEEEEEEEEECCC---ceEEEEEEEeC-CcEEEEECCEEEEecC----cceEEE--EecC---CCEEEEEEEEEeC
Confidence 44577888898876 46788888874 5689999999997643 122222 3667 8768888887654
No 33
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=46.04 E-value=65 Score=25.34 Aligned_cols=43 Identities=5% Similarity=-0.093 Sum_probs=26.5
Q ss_pred cceeEEEEcCEEeeec----cCCCC-ceeeccccccccCCCCCceEEEEEEE
Q 022918 186 DSAFCAWINGVPVGYS----QDSRL-PAEFEISDYCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 186 ~s~~~VwvNG~~VG~~----~~~~~-p~efDIT~~Lk~~~~G~eN~L~V~V~ 232 (290)
.....|+|||..++.- .++.. -.+..++=.|++ |. |+|.|...
T Consensus 66 ~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~a---G~-ntI~l~~~ 113 (145)
T 2w3j_A 66 ARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKA---GT-NSIKLVAE 113 (145)
T ss_dssp CCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECS---EE-EEEEEEEC
T ss_pred CeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECC---Cc-eEEEEEEe
Confidence 4567899999988542 12211 123333335888 95 99998863
No 34
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=44.72 E-value=29 Score=28.86 Aligned_cols=41 Identities=10% Similarity=-0.029 Sum_probs=31.0
Q ss_pred ceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEec
Q 022918 187 SAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRW 234 (290)
Q Consensus 187 s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~ 234 (290)
...++|+||+.||... -.|+.|..+. +.. | .+.|.+++...
T Consensus 32 ~~Ve~~~dg~~v~~~t--~~~ys~~~~~-~~~---G-~htlta~A~D~ 72 (190)
T 3pdd_A 32 SKVEFYNGDTLISSDT--TAPYTAKITG-AAV---G-AYNLKAVAVLS 72 (190)
T ss_dssp EEEEEEETTEEEEEEC--SSSEEEEECS-CCS---E-EEEEEEEEEET
T ss_pred EEEEEEECCEEEcccc--CCceEEEecc-CCC---c-cEEEEEEEEEC
Confidence 3578999999999753 4678888775 445 7 49999998864
No 35
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=43.20 E-value=26 Score=32.75 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=43.8
Q ss_pred CCeEEEEEEEEcCCCC----C----CCeEEEEeCCcc---------c----eeEEEEcCEEeee-------ccCCCCcee
Q 022918 158 NPTGCYRTYFHIPKEW----Q----GRRILLHFEAVD---------S----AFCAWINGVPVGY-------SQDSRLPAE 209 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~----~----~~~v~L~fegv~---------s----~~~VwvNG~~VG~-------~~~~~~p~e 209 (290)
.+.+.-...|.|.++. + .-++.|.-...+ . .++|+|||+.|-. +.|.-.|
T Consensus 91 ~~R~~~~~~F~Ls~~~~~~L~~~~~~~rl~L~C~~~~~~~~~~~~~i~fP~~~eI~VNg~~vk~n~rGlKnk~Gt~~P-- 168 (371)
T 3i2d_A 91 GGRGMCSAKFKLSKADYNLLSNPNSKHRLYLFSGMINPLGSRGNEPIQFPFPNELRCNNVQIKDNIRGFKSKPGTAKP-- 168 (371)
T ss_dssp EEEEEEEEEECCCHHHHHHHHSTTCCEEEEEEEEESSCSSCGGGBCCCCCSSEEEEETTEECCSCCSSCTTSCGGGSC--
T ss_pred CCCCEEEEEEEECHHHHHHHhcCCCCceEEEEeeecCCCCCCCCcCeecCCceEEEECCEEeccccccCCCCCCCcCC--
Confidence 4456667777776432 1 235555433221 1 3499999999942 2343344
Q ss_pred eccccccccCCCCCceEEEEEEEe
Q 022918 210 FEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 210 fDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
.|||++|+.. +..|.|.|....
T Consensus 169 vDIT~~lr~~--~~~N~I~i~y~~ 190 (371)
T 3i2d_A 169 ADLTPHLKPY--TQQNNVELIYAF 190 (371)
T ss_dssp EECGGGCCCS--SSCEEEEEEEEE
T ss_pred CCchhhhccC--CCCcEEEEEEec
Confidence 7999999871 235999886654
No 36
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=39.89 E-value=29 Score=34.89 Aligned_cols=53 Identities=17% Similarity=0.136 Sum_probs=34.1
Q ss_pred CCeEEEEeCCccceeEEEEcCEEeeecc-CCC-Cceeec-cccccccCCCCCceEEEEEEEe
Q 022918 175 GRRILLHFEAVDSAFCAWINGVPVGYSQ-DSR-LPAEFE-ISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 175 ~~~v~L~fegv~s~~~VwvNG~~VG~~~-~~~-~p~efD-IT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
|+.+-+..=.--...++||||+.+|... +.. ..+.++ |+ +++ | +|+|.+..++
T Consensus 597 g~~~~v~vysN~~~veLf~Ngks~g~~~~~~~~~~~~w~~v~--~~~---G-~~~l~av~~~ 652 (692)
T 3fn9_A 597 KRTTAVTVYSNIGTPKVYLNGQELSGIRNGYTDVHYVFDNVS--LAD---G-KNILKAVVST 652 (692)
T ss_dssp CSEEEEEEEESSSCCEEEETTEECCCCEECSSTTEEEEEEEE--CCS---E-EEEEEEEEEE
T ss_pred CceEEEEEEcCCCEEEEEECCEEEEEEecCCCceEEEEeeee--cCC---C-ceEEEEEEEe
Confidence 5555554433344689999999999743 222 236674 64 467 8 5999888764
No 37
>2axw_A DRAD invasin; homodimer, beta-sandwich, immunoglobulin-like fold, swapped terminal strands, cell invasion; HET: GOL; 1.05A {Escherichia coli} SCOP: b.2.3.2
Probab=38.91 E-value=42 Score=26.71 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=32.6
Q ss_pred EEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEe
Q 022918 179 LLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 179 ~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
.|...+..+.+.||.|.+.+|- .|-.+-|. -+. . .|+|.|++..
T Consensus 25 rI~~~~~HtGF~Iwsna~q~gg-----~p~~Yil~--~~~---~-~h~LrVRLgG 68 (134)
T 2axw_A 25 RIICREAHTGFHVWMNERQVDG-----RAERYVVQ--SKD---G-RHELRVRTGG 68 (134)
T ss_dssp EEECCSCCSEEEEEESSEECTT-----CSSEEEEE--ETT---S-SCEEEEEEEC
T ss_pred EEEeCCCcceEEEEecccccCC-----CCcEEEEE--cCC---C-ccEEEEEEcC
Confidence 3666788999999999999865 34555555 233 4 4999999974
No 38
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=35.24 E-value=46 Score=28.07 Aligned_cols=27 Identities=22% Similarity=0.448 Sum_probs=23.0
Q ss_pred CeEEEEeCCccceeEEEEcCEEeeecc
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGYSQ 202 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~~~ 202 (290)
..+.+..++......+||||+.++...
T Consensus 100 ~Hv~~t~d~~~G~~~lYvdG~~~~~~~ 126 (217)
T 3flp_A 100 YHVCHVWSGVDGRMAVYANGSPCGTME 126 (217)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEES
T ss_pred EEEEEEEECCCCEEEEEECCEEeccee
Confidence 578888998888899999999998743
No 39
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=35.20 E-value=60 Score=25.57 Aligned_cols=55 Identities=11% Similarity=0.143 Sum_probs=42.9
Q ss_pred EEEEEEcCCC--CCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeecccccccc
Q 022918 163 YRTYFHIPKE--WQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYP 218 (290)
Q Consensus 163 Yrr~F~lp~~--~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~ 218 (290)
.-|.|.||.. +.|++|.+.=.+ .+..+|+.|++.+--..|.-.-|.++....+..
T Consensus 64 W~rdI~LP~~~~~~gK~V~~~S~A-gY~S~V~y~~~svtl~rG~t~~F~y~~g~Wv~~ 120 (126)
T 4dny_A 64 WVRDIYLPQGPDLEGKMVRFVSSA-GYSSTVFYGDRKVTLSVGNTLLFKYVNGQWFRS 120 (126)
T ss_dssp CCSEEECCCSGGGTTCEEEEEEEC-SSCEEEEETTEEEEECTTCEEEEEEETTEEEET
T ss_pred eEcceECCCCcccCCCEEEEEEec-CccEEEEECCcEEEecCCCEEEEEEcCCEEEEc
Confidence 4578899875 468888887655 677899999999988888777788877666666
No 40
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=34.91 E-value=38 Score=28.64 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=43.2
Q ss_pred CeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEecCCCCcccCCCCCccccccccc
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDV 255 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~dgs~ledqd~w~~sGI~RdV 255 (290)
..+.+.+++ +....||+||+.|....... ..+++.- | -|.+.|=-.++..| --.|.+.|=.+.+
T Consensus 108 ntvaf~~d~-~~~~~ly~NG~~V~t~~~~~-------~~fi~~i--~-ln~~~IG~~~r~sg-----~~~y~F~G~Id~~ 171 (191)
T 2v73_A 108 NTLALKIEK-GIGAKIFLNGSLVKTVSDPN-------IKFLNAI--N-LNSGFIGKTDRANG-----YNEYLFRGNIDFM 171 (191)
T ss_dssp EEEEEEEET-TTEEEEEETTEEEEEEECTT-------CCCGGGS--C-CCEEEESSCCCCSS-----SCCCCCCEEEEEE
T ss_pred EEEEEEEcC-CccEEEEECCEEEEEEeccc-------ccceeec--C-CceEEEcceeecCC-----ceeeccCCeEEEE
Confidence 578888888 88999999999999874321 2223220 2 24444433222111 1356788888888
Q ss_pred eeeEec
Q 022918 256 LLLAKP 261 (290)
Q Consensus 256 ~L~~~p 261 (290)
.|+..+
T Consensus 172 ~iYn~a 177 (191)
T 2v73_A 172 NIYDKP 177 (191)
T ss_dssp EEESSC
T ss_pred EEEcCc
Confidence 887654
No 41
>4gq7_A Flocculin, LG-FLO1P; carbohydrate binding domain, PA14 domain, sugar binding PROT; HET: NAG; 2.53A {Saccharomyces pastorianus}
Probab=33.41 E-value=85 Score=26.99 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=31.3
Q ss_pred CCeEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEE
Q 022918 158 NPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVP 197 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~ 197 (290)
+-..-|+-.|.-|. ...+.+.|..+|..+.|||+|+.
T Consensus 87 nFs~~~tGyF~pp~---TG~YtF~l~~aDD~a~L~vG~~~ 123 (224)
T 4gq7_A 87 NVTVEMTGYFLPPQ---TGSYTFKFATVDDSAILSVGGSI 123 (224)
T ss_dssp SEEEEEEEEECCSS---SEEEEEEEEECBSEEEEEESBTT
T ss_pred eEEEEEEEEEECCC---CEEEEEEEEccCCeEEEEECCcc
Confidence 56778888887665 47899999989999999999977
No 42
>2yew_B E1 envelope glycoprotein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=32.91 E-value=57 Score=30.37 Aligned_cols=28 Identities=11% Similarity=0.296 Sum_probs=23.9
Q ss_pred CeEEEEeCCccceeEEEEcCEEeeeccC
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGYSQD 203 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~~~~ 203 (290)
-.+.+.++++....++||||..-+...+
T Consensus 127 a~l~ityG~~~~tv~~yVNG~tp~~~~~ 154 (427)
T 2yew_B 127 AQVMISIGELNQTVDVFVNGDSPARIQQ 154 (427)
T ss_dssp EEEEEECSSCEEEEEEECSSCEEEEETT
T ss_pred eeEEEEECcceEEEEEEEcCccceeccc
Confidence 4678889999999999999998877654
No 43
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=32.68 E-value=1.4e+02 Score=23.86 Aligned_cols=57 Identities=14% Similarity=0.211 Sum_probs=30.7
Q ss_pred eEEEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeecc--CCCCceeeccccccccCCCCCceEEEEEEE
Q 022918 160 TGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQ--DSRLPAEFEISDYCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 160 ~gwYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~--~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~ 232 (290)
.|.|+..+.-...+.+++- .|.|||. .+.-. -...++..-.+=.|+. |+ |+|.|.-.
T Consensus 47 tG~YdLsI~Ya~~~G~k~n-----------~L~VNG~-~~~V~fP~tt~~~~~~~~V~L~a---G~-NtI~i~~~ 105 (140)
T 2bgo_A 47 TGEYRINLTWSSPYSSKVN-----------TLVMDGT-ALSYAFAEATVPVTYVQTKTLSA---GN-HSFGVRVG 105 (140)
T ss_dssp SEEEEEEEEECCCSSEEEE-----------EEEETTE-EEEEEEESCCSCEEEEEEEEECS---SC-EEEEEECC
T ss_pred CcEEEEEEEeccCCCCceE-----------EEEECCc-eeEEEECCcCCcEEEEEEEEecC---Cc-cEEEEEec
Confidence 5777777777554444444 4566665 33211 1111222222236788 95 99998864
No 44
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=31.91 E-value=59 Score=32.27 Aligned_cols=50 Identities=14% Similarity=0.262 Sum_probs=32.6
Q ss_pred CCeEEEE-eCCccceeEEEEcCEEeeeccC-CCCceeec-cccccccCCCCCceEEEEEE
Q 022918 175 GRRILLH-FEAVDSAFCAWINGVPVGYSQD-SRLPAEFE-ISDYCYPHGSDKKNVLAVQV 231 (290)
Q Consensus 175 ~~~v~L~-fegv~s~~~VwvNG~~VG~~~~-~~~p~efD-IT~~Lk~~~~G~eN~L~V~V 231 (290)
|+.+-+. +-.. ...+++|||+.+|...- .+..+.|+ |+ +++ | +|+|.+..
T Consensus 589 g~~~~v~vysn~-~~veL~~ng~s~g~~~~~~~~~~~w~~v~--~~~---G-~~~l~a~~ 641 (667)
T 3cmg_A 589 QPEQTFMAFTTA-PEAELFVNGVSCGKQKADTYSTVVWKNVK--LTS---G-ENIIRVTT 641 (667)
T ss_dssp CSSEEEEEEESS-SEEEEEETTEEEEEEECCTTSEEEEEEEC--CCS---E-EEEEEEEC
T ss_pred CceeEEEEeCCC-CEEEEEECCEEeeEEEcCCCcEEEEEecc--ccC---C-ceEEEEEE
Confidence 4433333 3333 36889999999997643 34555675 64 467 8 59888776
No 45
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=31.39 E-value=1.4e+02 Score=23.15 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=25.3
Q ss_pred cceeEEEEcCEEe-eec----cCCCCc-eeeccccccccCCCCCceEEEEEEE
Q 022918 186 DSAFCAWINGVPV-GYS----QDSRLP-AEFEISDYCYPHGSDKKNVLAVQVF 232 (290)
Q Consensus 186 ~s~~~VwvNG~~V-G~~----~~~~~p-~efDIT~~Lk~~~~G~eN~L~V~V~ 232 (290)
.....|+|||..+ +.- .++... ....++=.|++ |. |+|.|...
T Consensus 67 ~~~~~l~VNG~~~~~~v~~p~Tg~w~~w~~~~~~v~L~a---G~-ntI~l~~~ 115 (144)
T 2w47_A 67 NRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQ---GN-NVIRATAI 115 (144)
T ss_dssp CCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECS---EE-EEEEEEEC
T ss_pred CeEEEEEECCeEeeeEEEecCCCCCCeeEEEEEEEEECC---Cc-cEEEEEEe
Confidence 4567899999874 321 122211 22233335788 94 99999864
No 46
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=30.74 E-value=45 Score=26.82 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=24.5
Q ss_pred cceeEEEEcCEEeee----ccCCCCce-eeccccccccCCCCCceEEEEEE
Q 022918 186 DSAFCAWINGVPVGY----SQDSRLPA-EFEISDYCYPHGSDKKNVLAVQV 231 (290)
Q Consensus 186 ~s~~~VwvNG~~VG~----~~~~~~p~-efDIT~~Lk~~~~G~eN~L~V~V 231 (290)
+....|.|||..... ..+....+ ..-|+=.|+. |. |+|.+.-
T Consensus 85 ~r~~~v~VNG~~~~~v~fp~Tg~W~~~~~~tv~V~L~a---G~-NtI~~~~ 131 (156)
T 2wz8_A 85 DRYCSISVNGGPEKGHYFFNTRGWNTYRTDIIDVYLNA---GN-NTIRFYN 131 (156)
T ss_dssp CEEEEEEETTCCCEEEEECCCSSTTCCEEEEEEEEECS---EE-EEEEEEC
T ss_pred cceEEEEECCceeeEEEeCCCCCCCcceEEEEEEEECC---Cc-eEEEEEe
Confidence 457788899876332 11222222 3333334888 95 9999873
No 47
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=29.54 E-value=71 Score=29.61 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=28.8
Q ss_pred eeEEEEcCEEeeec-------cCC---CCceeeccccccccCCCCC--ceEEEEEEE
Q 022918 188 AFCAWINGVPVGYS-------QDS---RLPAEFEISDYCYPHGSDK--KNVLAVQVF 232 (290)
Q Consensus 188 ~~~VwvNG~~VG~~-------~~~---~~p~efDIT~~Lk~~~~G~--eN~L~V~V~ 232 (290)
...|.|||+.|-.- .|. ....-+|||++|+. |. .|.|.|...
T Consensus 101 ~i~lkVNg~~v~lp~~~p~~k~g~~~kr~~~PidIT~~lr~---~~~~~N~I~vt~~ 154 (360)
T 4fo9_A 101 SLCIKVNGKLFPLPGYAPPPKNGIEQKRPGRPLNITSLVRL---SSAVPNQISISWA 154 (360)
T ss_dssp TCEEEETTEEECCCC--------CCCCCBCCCEECGGGSCC---CSSSCEEEEEEEE
T ss_pred ceEEEECCEEccCCCCCCCcccccccCCCCCceechhhhcc---CCCCCcEEEEEEe
Confidence 45899999999631 121 23356899999987 63 388888754
No 48
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=28.03 E-value=22 Score=26.70 Aligned_cols=25 Identities=20% Similarity=0.442 Sum_probs=18.3
Q ss_pred CCCeEEEEeCCccceeEEEEcCEEeee
Q 022918 174 QGRRILLHFEAVDSAFCAWINGVPVGY 200 (290)
Q Consensus 174 ~~~~v~L~fegv~s~~~VwvNG~~VG~ 200 (290)
.|+...+.|+- ....||+||+.|-.
T Consensus 20 ~G~~~RIvLeK--~tmdVwvNG~~iet 44 (94)
T 2kd2_A 20 DGEDLRVVLEK--DTMDVWCNGQKMET 44 (94)
T ss_dssp TTEEEEEEEET--TTTEEEESSSBCCC
T ss_pred CCCEEEEEEec--CcEEEEECCEEeEE
Confidence 46666677665 34789999999854
No 49
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=26.71 E-value=1.9e+02 Score=25.14 Aligned_cols=75 Identities=13% Similarity=0.163 Sum_probs=45.0
Q ss_pred CCeEEEEEEEEcCCCCCC---CeEEEEe----CCcc-------ceeEEEEcCEEeeecc--CC-----CCc--eee-ccc
Q 022918 158 NPTGCYRTYFHIPKEWQG---RRILLHF----EAVD-------SAFCAWINGVPVGYSQ--DS-----RLP--AEF-EIS 213 (290)
Q Consensus 158 ~~~gwYrr~F~lp~~~~~---~~v~L~f----egv~-------s~~~VwvNG~~VG~~~--~~-----~~p--~ef-DIT 213 (290)
+...||.=.|.||++|.- .-.+..| .... -...+||.|..+-... +. ..+ ..+ ++.
T Consensus 65 G~e~~Ygfs~yLp~dW~~~~qs~~iaQf~~~~~d~gc~g~~~~P~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~~~~l~ 144 (238)
T 2zzj_A 65 GEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAGCGGDDWMPSTMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLA 144 (238)
T ss_dssp TEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCCCSSSSEEEEEEEEEETTEEEEEEEEECCBTTBCCEEEEEEEEEE
T ss_pred CCceEEEEEEECchhhcCCCcceEEEEeeccCCCCCccccCCCCceeEEEeCCEEEEEeecccccccCcCccceeccccc
Confidence 567899999999999953 2233334 2221 2466999998875221 11 111 123 233
Q ss_pred cccccCCCCCceEEEEEEEecCC
Q 022918 214 DYCYPHGSDKKNVLAVQVFRWSD 236 (290)
Q Consensus 214 ~~Lk~~~~G~eN~L~V~V~~~~d 236 (290)
+ |.. |+-..|+|+|.=.+|
T Consensus 145 ~-v~~---G~Wh~iVihvkWs~d 163 (238)
T 2zzj_A 145 T-VSA---GAWHRVVLQIKWASD 163 (238)
T ss_dssp E-CCT---TSCEEEEEEEEECSS
T ss_pred c-ccC---CceEEEEEEEEEeCC
Confidence 3 456 888999999864333
No 50
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=25.11 E-value=1e+02 Score=31.52 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=20.2
Q ss_pred eeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEE
Q 022918 188 AFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQV 231 (290)
Q Consensus 188 ~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V 231 (290)
...|.|||+.+ ++...| ++.. |++++|.|.+
T Consensus 780 ~~~~~~dg~~~---~~~~i~-------~~~~---~~~~~v~v~~ 810 (811)
T 3qde_A 780 VAKITVDGNEI---SGNILP-------VFND---GKTHKVEVIM 810 (811)
T ss_dssp EEEEEETTEEC---SSSBCC-------CCCS---SCEEEEEEEE
T ss_pred cEEEEECCEEC---cCCeee-------ecCC---CCEEEEEEEE
Confidence 46899999987 232222 3445 7778887765
No 51
>2vmh_A GH95CBM51, fibronectin type III domain protein; carbohydrate-binding module, sugar-binding protein, galactose, fucosidase; 1.50A {Clostridium perfringens} SCOP: b.18.1.33 PDB: 2vmi_A 2vmg_A*
Probab=24.91 E-value=1.2e+02 Score=24.34 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=27.8
Q ss_pred ceeEEEEcCEEeeeccC---CC--CceeeccccccccCCCCCceEEEEEEEecCC
Q 022918 187 SAFCAWINGVPVGYSQD---SR--LPAEFEISDYCYPHGSDKKNVLAVQVFRWSD 236 (290)
Q Consensus 187 s~~~VwvNG~~VG~~~~---~~--~p~efDIT~~Lk~~~~G~eN~L~V~V~~~~d 236 (290)
-.+.||.+|+.+-.+.- .. .+.++||+ |. ++|.++|....+
T Consensus 91 v~F~V~~Dg~~l~~S~~~~~~~~~~~v~vdv~--------G~-~~L~L~v~~~gd 136 (151)
T 2vmh_A 91 ISFEVYLDNEKVFDSGLMTGDTTQKHVKVPIA--------GK-NTLKLVVKDGGD 136 (151)
T ss_dssp EEEEEEETTEEEEECCCEETTSCCEEEEEECT--------TC-CEEEEEEECTTS
T ss_pred EEEEEEcCCeEEEEcccccCCCCCeEEEEecC--------CC-eEEEEEEEeCCC
Confidence 45789999999987652 22 33444554 74 899999976543
No 52
>2chh_A Protein RSC3288; lectin, sugar-binding protein, D-mannose, plant pathogen, hypothetical protein; HET: MAN BMA; 1.0A {Ralstonia solanacearum} SCOP: b.115.1.1 PDB: 1uqx_A*
Probab=24.34 E-value=93 Score=23.97 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=37.5
Q ss_pred EEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEe
Q 022918 166 YFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 166 ~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
.|.||+.-+-+-+.|.=.......+|||+.+.+..-.|.-++-..-=|..+.. |. =.+.|+|.-
T Consensus 6 ~F~LP~ni~Fg~ta~~Nsa~~QtikvyIdd~~~aT~tg~gt~d~~~gt~~l~S---g~-GkVriev~~ 69 (114)
T 2chh_A 6 VFTLPANTSFGVTAFANAANTQTIQVLVDNVVKATFTGSGTSDKLLGSQVLNS---GS-GAIKIQVSV 69 (114)
T ss_dssp EEECCTTCEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEC---TT-SEEEEEEEE
T ss_pred eeeCCCCcEEeEEEEeccCCceeEEEEECCeecceeeccCcCCCccceEEEec---CC-CeEEEEEEe
Confidence 57888864434444444446677899999988875444323211111455555 53 567777764
No 53
>2bv4_A Lectin CV-IIL; mannose; HET: MMA; 1.0A {Chromobacterium violaceum} PDB: 2boi_A*
Probab=24.17 E-value=94 Score=23.90 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=37.5
Q ss_pred EEEcCCCCCCCeEEEEeCCccceeEEEEcCEEeeeccCCCCceeeccccccccCCCCCceEEEEEEEe
Q 022918 166 YFHIPKEWQGRRILLHFEAVDSAFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 166 ~F~lp~~~~~~~v~L~fegv~s~~~VwvNG~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
.|.||+.-+-+-+.|.=.......+|||+.+.+..-.|.-++-..-=|..+.. |. =.+.|+|.-
T Consensus 5 ~F~LP~ni~Fg~ta~~Nsa~~QtikvyIdd~~~aT~tg~gt~d~~~~t~~l~S---g~-GkVriev~~ 68 (113)
T 2bv4_A 5 VFTLPARINFGVTVLVNSAATQHVEIFVDNEPRAAFSGVGTGDNNLGTKVINS---GS-GNVRVQITA 68 (113)
T ss_dssp EEECCTTCEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEC---TT-SEEEEEEEE
T ss_pred eEcCCCCcEEeEEEEeccCCceeEEEEECCeecceeeccCcCCCccceEEEec---CC-CeEEEEEEe
Confidence 57888864434444444446677899999988875444323211111455555 53 567777764
No 54
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=23.19 E-value=90 Score=22.74 Aligned_cols=33 Identities=21% Similarity=0.484 Sum_probs=25.9
Q ss_pred EEEEEEEcCCCCCCCeEEEEeCCccceeEEEEcC
Q 022918 162 CYRTYFHIPKEWQGRRILLHFEAVDSAFCAWING 195 (290)
Q Consensus 162 wYrr~F~lp~~~~~~~v~L~fegv~s~~~VwvNG 195 (290)
||-..+++- +..+.++.|||+|=+....-|++=
T Consensus 35 ~~~a~i~~v-~~~~~~v~VHfdGW~~~yDeWv~~ 67 (88)
T 2eqm_A 35 WYPSRIEKI-DYEEGKMLVHFERWSHRYDEWIYW 67 (88)
T ss_dssp EEEEEEEEE-ETTTTEEEEEESSSTTTEEEEEET
T ss_pred eeEEEEEEE-eccCCEEEEEECCCCCcccEEeeC
Confidence 577776653 235789999999999999999863
No 55
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=21.53 E-value=62 Score=27.03 Aligned_cols=25 Identities=28% Similarity=0.469 Sum_probs=21.1
Q ss_pred CeEEEEeCCccceeEEEEcCEEeee
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGY 200 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~ 200 (290)
..+.+..++......+||||+.++.
T Consensus 92 ~Hv~~twd~~~G~~~lyvdG~~~~~ 116 (204)
T 3kqr_A 92 VHICVSWESSSGIAEFWINGTPLVK 116 (204)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCC
T ss_pred EEEEEEEECCCCeEEEEECCEEeee
Confidence 4677778888888999999999875
No 56
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=21.50 E-value=62 Score=27.00 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=21.2
Q ss_pred CeEEEEeCCccceeEEEEcCEEeee
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGY 200 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~ 200 (290)
..+.+..++......+||||+.++.
T Consensus 94 ~Hv~~twd~~~G~~~lyvdG~~~~~ 118 (206)
T 3pvn_A 94 VHICTSWESASGIVEFWVDGKPRVR 118 (206)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCC
T ss_pred EEEEEEEECCCCeEEEEECCEEccc
Confidence 4677778888888999999999874
No 57
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=21.31 E-value=79 Score=25.81 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=23.0
Q ss_pred CCCeEEEEeCCccceeEEEEcCEEeeeccC
Q 022918 174 QGRRILLHFEAVDSAFCAWINGVPVGYSQD 203 (290)
Q Consensus 174 ~~~~v~L~fegv~s~~~VwvNG~~VG~~~~ 203 (290)
.++...|++........|||||+.|....+
T Consensus 130 ~g~w~~l~I~~~G~~i~~~vnG~~v~~~~D 159 (185)
T 4b1m_A 130 VNKKYHLKTEAEGDRFKIYLDDRLVIDAHD 159 (185)
T ss_dssp SSCCEEEEEEEETTEEEEEETTEEEEEEEC
T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEEEC
Confidence 366677777777788999999998876544
No 58
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=21.09 E-value=72 Score=31.93 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=23.2
Q ss_pred CeEEEEeCCccceeEEEEcCEEeeeccCC
Q 022918 176 RRILLHFEAVDSAFCAWINGVPVGYSQDS 204 (290)
Q Consensus 176 ~~v~L~fegv~s~~~VwvNG~~VG~~~~~ 204 (290)
-.+.+.++......+|||||++|....+.
T Consensus 111 ~~va~~~~~~~~~~~lyvnG~~v~~~~~~ 139 (679)
T 2sli_A 111 NTVALKADAANKQCRLFANGELLATLDKD 139 (679)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEEECS
T ss_pred EEEEEEEECCCCeEEEEECCEEeEeeccc
Confidence 35667777777899999999999987653
No 59
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=21.07 E-value=50 Score=25.44 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=16.7
Q ss_pred EeCCccceeEEEEcCEEeeecc
Q 022918 181 HFEAVDSAFCAWINGVPVGYSQ 202 (290)
Q Consensus 181 ~fegv~s~~~VwvNG~~VG~~~ 202 (290)
.+-|-.+.-.|||||++||-+.
T Consensus 70 ~~sg~~TvPqIFI~g~~IGG~D 91 (118)
T 2wul_A 70 DYSNWPTIPQVYLNGEFVGGCD 91 (118)
T ss_dssp HHHTCCSSCEEEETTEEEECHH
T ss_pred HhccCCCCCeEeECCEEECCHH
Confidence 3445567788999999999753
No 60
>2xr4_A Lectin; sugar binding protein, LUNG, pathogen; 1.90A {Burkholderia cenocepacia}
Probab=20.71 E-value=1.8e+02 Score=22.48 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=37.5
Q ss_pred EEEcCCCCCCCeEEEEeCCccceeEEEEcC--EEeeeccCCCCceeeccccccccCCCCCceEEEEEEEe
Q 022918 166 YFHIPKEWQGRRILLHFEAVDSAFCAWING--VPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFR 233 (290)
Q Consensus 166 ~F~lp~~~~~~~v~L~fegv~s~~~VwvNG--~~VG~~~~~~~p~efDIT~~Lk~~~~G~eN~L~V~V~~ 233 (290)
.|.||+.-+-+-+.|.=.......+|||+. +.+..-.|.-++-..-=|..+.. |. =.|.|+|.-
T Consensus 6 ~F~LP~ni~Fg~ta~~Nsa~~QtikvyIdd~~~~~aT~~g~gt~d~~~~t~~lnS---g~-GkVriev~~ 71 (116)
T 2xr4_A 6 TFNLPPHIKFGVTALTHAANDQTIDIYIDDDPKPAATFKGAGAQDQNLGTKVLDS---GN-GRVRVIVMA 71 (116)
T ss_dssp EEECCTTCEEEEEEEECSCSCCEEEEEETTCSSCSEEECCCSSTTEEEEEEEEEC---TT-SEEEEEEEE
T ss_pred eeeCCCCcEEeEEEEeccCCceeEEEEeCCCCccceeeeccCcCCCccceEEEec---CC-CeEEEEEEe
Confidence 478887644444445445566788999999 77765444434322112445555 53 567777764
Done!