RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 022919
         (290 letters)



>d1y0za_ b.82.2.8 (A:) Clavaminate synthase-like protein At3g21360
           {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 327

 Score = 33.0 bits (74), Expect = 0.032
 Identities = 21/123 (17%), Positives = 32/123 (26%), Gaps = 17/123 (13%)

Query: 146 SLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGI 205
              IP Q        P V  P        +  L L        + +   L       G +
Sbjct: 5   ETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQ---TIKTQKHYLDSLLHESGAV 61

Query: 206 LFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDADLDPGIAGENS 265
           LF            R F + +    +   VV  F F  +     +A    +   +   N 
Sbjct: 62  LF------------RGFPVNSAD--DFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANE 107

Query: 266 LPA 268
            P 
Sbjct: 108 SPP 110


>d2aiba1 a.134.1.1 (A:1-98) beta-cinnamomin {Fungus (Phytophthora
           cinnamomi) [TaxId: 4785]}
          Length = 98

 Score = 27.1 bits (60), Expect = 0.99
 Identities = 5/15 (33%), Positives = 9/15 (60%)

Query: 116 QSMLQDVADLNLSDC 130
            +M++ +  LN  DC
Sbjct: 57  NTMIKKIVALNPPDC 71


>d2ga1a1 a.4.1.16 (A:1-102) Hypothetical protein Ava_0674 (Alr1493
           orthologue) {Anabaena variabilis [TaxId: 1172]}
          Length = 102

 Score = 25.6 bits (56), Expect = 3.7
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 94  RQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRV 136
           + +  EV    P + +    N   MLQ+   +    C G+ R+
Sbjct: 4   KTQLLEVIAALPEELVDQALNYVQMLQNPIQITPGVCGGQARI 46


>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId:
           5811]}
          Length = 224

 Score = 26.1 bits (57), Expect = 5.5
 Identities = 4/33 (12%), Positives = 16/33 (48%), Gaps = 3/33 (9%)

Query: 90  IEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDV 122
           ++D   + P V ++     ++ +    ++++D 
Sbjct: 6   LQDIITRFPNVVLMKQTAQLRAMM---TIIRDK 35


>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase
           {Alfalfa (Medicago sativa) [TaxId: 3879]}
          Length = 244

 Score = 25.9 bits (56), Expect = 6.4
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 14/107 (13%)

Query: 44  LQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWC---------KIIEDYR 94
               +E L+ +  +++V  D     +     D VL K     W          K  E   
Sbjct: 112 RPQVVENLSGSNNLTYVGGDM---FTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVT 168

Query: 95  QKHPE--VTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQ 139
                  VTI+D     K   N+ + ++ + D+N++  NGK R   +
Sbjct: 169 NDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEE 215


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.137    0.399 

Gapped
Lambda     K      H
   0.267   0.0626    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,066,233
Number of extensions: 48982
Number of successful extensions: 131
Number of sequences better than 10.0: 1
Number of HSP's gapped: 131
Number of HSP's successfully gapped: 8
Length of query: 290
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 206
Effective length of database: 1,254,276
Effective search space: 258380856
Effective search space used: 258380856
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.0 bits)