BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022920
         (290 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3N5F|A Chain A, Crystal Structure Of L-N-Carbamoylase From Geobacillus
           Stearothermophilus Cect43
 pdb|3N5F|B Chain B, Crystal Structure Of L-N-Carbamoylase From Geobacillus
           Stearothermophilus Cect43
          Length = 408

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 30/274 (10%)

Query: 10  GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 69
           G+++ +A+++  +D   + L Q    P +V  Y+E+HIEQG VLE  G P+G+V GIAG 
Sbjct: 155 GISLAEAMKQAGLD--PDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGL 212

Query: 70  TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXX 129
             +K T+ G   HAG  PMS+R+DPM AAA++I+++E   +                   
Sbjct: 213 IWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR------------------ 254

Query: 130 XXXXXVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 189
                V TVG++  +P   NVIP  V F +DLR +    R+ V   ++ +   I ++R+V
Sbjct: 255 -TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNV 313

Query: 190 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLT 249
               ER  +   V+C    S ++K A+ AA +++ G     +P   SGA HD++ ++ + 
Sbjct: 314 RVTTERLQEMPPVLC----SDEVKRAAEAACQKL-GYPSFWLP---SGAAHDSVQLAPIC 365

Query: 250 KVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVL 283
            +GM+FVR + G+SHSPAE    +D  AAG  VL
Sbjct: 366 PIGMIFVRSQDGVSHSPAEWSTKEDC-AAGAEVL 398


>pdb|1Z2L|A Chain A, Crystal Structure Of Allantoate-Amidohydrolase From E.Coli
           K12 In Complex With Substrate Allantoate
 pdb|1Z2L|B Chain B, Crystal Structure Of Allantoate-Amidohydrolase From E.Coli
           K12 In Complex With Substrate Allantoate
          Length = 423

 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 112/245 (45%), Gaps = 27/245 (11%)

Query: 42  YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 101
           ++E+HIEQG VLE  G  +GVV  I GQ R  VT+ G   HAGT PM  R+D + A    
Sbjct: 188 FVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYA---- 243

Query: 102 IVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPGEVTFTVDL 161
                R+C    +     G              V T G++   P+  NV+PG+ TFT+D 
Sbjct: 244 ---FSRICHQSVEKAKRMG-----------DPLVLTFGKVEPRPNTVNVVPGKTTFTIDC 289

Query: 162 RAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALK 221
           R  D A       +L N +  IC++  +   ++   D   V  + +L         A L 
Sbjct: 290 RHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKEL--------VATLT 341

Query: 222 RMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLA 281
            +    +    V+ SGAGHDA   +      M+F+    GISH+PAE     D+ A G+ 
Sbjct: 342 ELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDL-AEGVK 400

Query: 282 VLAFL 286
            LA +
Sbjct: 401 TLALM 405


>pdb|2IMO|A Chain A, Crystal Structure Of Allantoate Amidohydrolase From
           Escherichia Coli At Ph 4.6
 pdb|2IMO|B Chain B, Crystal Structure Of Allantoate Amidohydrolase From
           Escherichia Coli At Ph 4.6
          Length = 423

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 42  YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 101
           ++E+HIEQG VLE  G  +GVV  I GQ R  VT+ G   HAGT P   R+D + A    
Sbjct: 188 FVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPXGYRRDTVYA---- 243

Query: 102 IVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPGEVTFTVDL 161
                R+C    +     G              V T G++   P+  NV+PG+ TFT+D 
Sbjct: 244 ---FSRICHQSVEKAKRXG-----------DPLVLTFGKVEPRPNTVNVVPGKTTFTIDC 289

Query: 162 RAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALK 221
           R  D A       +L N    IC++  +   ++   D   V  + +L         A L 
Sbjct: 290 RHTDAAVLRDFTQQLENDXRAICDEXDIGIDIDLWXDEEPVPXNKEL--------VATLT 341

Query: 222 RMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLA 281
            +    +    V  SGAGHDA   +       +F+    GISH+PAE     D+ A G+ 
Sbjct: 342 ELCEREKLNYRVXHSGAGHDAQIFAPRVPTCXIFIPSINGISHNPAERTNITDL-AEGVK 400

Query: 282 VLAF 285
            LA 
Sbjct: 401 TLAL 404


>pdb|2V8G|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The Product Beta-
           Alanine
 pdb|2V8G|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The Product Beta-
           Alanine
 pdb|2V8G|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The Product Beta-
           Alanine
 pdb|2V8G|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The Product Beta-
           Alanine
 pdb|2VL1|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The A Gly-Gly
           Peptide
 pdb|2VL1|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The A Gly-Gly
           Peptide
 pdb|2VL1|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The A Gly-Gly
           Peptide
 pdb|2VL1|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri In Complex With The A Gly-Gly
           Peptide
          Length = 474

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 30/253 (11%)

Query: 34  YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93
           Y    +  + E+HIEQGP+LE     +G+V G+      KVTV G   HAGT P  +R+D
Sbjct: 213 YKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKD 272

Query: 94  PMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPG 153
            +  ++++IV    + +                          T G I + P + N+IPG
Sbjct: 273 ALLMSSKMIVAASEIAQRHNGLF--------------------TCGIIDAKPYSVNIIPG 312

Query: 154 EVTFTVDLRAIDDAGRETVLYELS---NQLYQICEKRSVSCIVERKHDANAVMCDADLSS 210
           EV+FT+D R   D    T+L E +   ++L +I +  ++S   E    + AV        
Sbjct: 313 EVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIE 372

Query: 211 QLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHV 270
            +  +++A  K+       ++  I SGAGHD+   +      M+F+  + G+SH+  E+ 
Sbjct: 373 CVSRSAFAQFKK------DQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYS 426

Query: 271 LDDDVWAAGLAVL 283
             +++   G  VL
Sbjct: 427 SPEEI-ENGFKVL 438


>pdb|1R3N|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|E Chain E, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|F Chain F, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|G Chain G, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
 pdb|1R3N|H Chain H, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri
          Length = 462

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 30/253 (11%)

Query: 34  YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93
           Y    +  + E+HIEQGP+LE     +G+V G+      KVTV G   HAGT P  +R+D
Sbjct: 213 YKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKD 272

Query: 94  PMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPG 153
            +  ++++IV    + +                          T G I + P + N+IPG
Sbjct: 273 ALLMSSKMIVAASEIAQRHNGLF--------------------TCGIIDAKPYSVNIIPG 312

Query: 154 EVTFTVDLRAIDDAGRETVLYELS---NQLYQICEKRSVSCIVERKHDANAVMCDADLSS 210
           EV+FT+D R   D    T+L E +   ++L +I +  ++S   E    + AV        
Sbjct: 313 EVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIE 372

Query: 211 QLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHV 270
            +  +++A  K+       ++  I SGAGHD+   +      M+F+  + G+SH+  E+ 
Sbjct: 373 CVSRSAFAQFKK------DQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYS 426

Query: 271 LDDDVWAAGLAVL 283
             +++   G  VL
Sbjct: 427 SPEEI-ENGFKVL 438


>pdb|2V8D|A Chain A, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
 pdb|2V8D|B Chain B, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
 pdb|2V8H|A Chain A, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri In Complex With Its
           Substrate N-Carbamyl-Beta-Alanine
 pdb|2V8H|B Chain B, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri In Complex With Its
           Substrate N-Carbamyl-Beta-Alanine
 pdb|2V8H|C Chain C, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri In Complex With Its
           Substrate N-Carbamyl-Beta-Alanine
 pdb|2V8H|D Chain D, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri In Complex With Its
           Substrate N-Carbamyl-Beta-Alanine
          Length = 474

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 30/253 (11%)

Query: 34  YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93
           Y    +  + E+HIEQGP+LE     +G+V G+      KVTV G   HAGT P  +R+D
Sbjct: 213 YKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKD 272

Query: 94  PMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPG 153
            +  ++++IV    + +                          T G I + P + N+IPG
Sbjct: 273 ALLMSSKMIVAASEIAQRHNGLF--------------------TCGIIDAKPYSVNIIPG 312

Query: 154 EVTFTVDLRAIDDAGRETVLYELS---NQLYQICEKRSVSCIVERKHDANAVMCDADLSS 210
           EV+FT+D R   D    T+L E +   ++L +I +  ++S   E    + AV        
Sbjct: 313 EVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIE 372

Query: 211 QLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHV 270
            +  +++A  K+       ++  I SGAGHD+   +      M+F+  + G+SH+  E+ 
Sbjct: 373 CVSRSAFAQFKK------DQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYS 426

Query: 271 LDDDVWAAGLAVL 283
             +++   G  VL
Sbjct: 427 SPEEI-ENGFKVL 438


>pdb|2V8V|A Chain A, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
 pdb|2V8V|B Chain B, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
 pdb|2V8V|C Chain C, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
 pdb|2V8V|D Chain D, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
           From Saccharomyces Kluyveri
          Length = 474

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 30/253 (11%)

Query: 34  YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93
           Y    +  + E+HIEQGP+LE     +G+V G+      KVTV G   HAGT P  +R+D
Sbjct: 213 YKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKD 272

Query: 94  PMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPG 153
            +  ++++IV    + +                          T G I + P + N+IPG
Sbjct: 273 ALLMSSKMIVAASEIAQRHNGLF--------------------TCGIIDAKPYSVNIIPG 312

Query: 154 EVTFTVDLRAIDDAGRETVLYELS---NQLYQICEKRSVSCIVERKHDANAVMCDADLSS 210
           EV+FT+D     D    T+L E +   ++L +I +  ++S   E    + AV        
Sbjct: 313 EVSFTLDFAHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIE 372

Query: 211 QLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHV 270
            +  +++A  K+       ++  I SGAGHD+   +      M+F+  + G+SH+  E+ 
Sbjct: 373 CVSRSAFAQFKK------DQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYS 426

Query: 271 LDDDVWAAGLAVL 283
             +++   G  VL
Sbjct: 427 SPEEI-ENGFKVL 438


>pdb|1R43|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri (Selenomethionine Substituted
           Protein)
 pdb|1R43|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
           Saccharomyces Kluyveri (Selenomethionine Substituted
           Protein)
          Length = 463

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 30/253 (11%)

Query: 34  YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93
           Y    +  + E+HIEQGP+LE     +G+V G+      KVTV G   HAGT P  +R+D
Sbjct: 214 YKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKD 273

Query: 94  PMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXXXXXXXVCTVGEISSWPSASNVIPG 153
            +  +++ IV    + +                          T G I + P + N+IPG
Sbjct: 274 ALLXSSKXIVAASEIAQRHNGLF--------------------TCGIIDAKPYSVNIIPG 313

Query: 154 EVTFTVDLRAIDDAGRETVLYELS---NQLYQICEKRSVSCIVERKHDANAVMCDADLSS 210
           EV+FT+D R   D    T L E +   ++L +I +  ++S   E    + AV        
Sbjct: 314 EVSFTLDFRHPSDDVLATXLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIE 373

Query: 211 QLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHV 270
            +  +++A  K+       ++  I SGAGHD+   +       +F+  + G+SH+  E+ 
Sbjct: 374 CVSRSAFAQFKK------DQVRQIWSGAGHDSCQTAPHVPTSXIFIPSKDGLSHNYYEYS 427

Query: 271 LDDDVWAAGLAVL 283
             +++   G  VL
Sbjct: 428 SPEEI-ENGFKVL 439


>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From
           Methicillin Resistant Staphylococcus Aureus
 pdb|4EWT|C Chain C, The Crystal Structure Of A Putative Aminohydrolase From
           Methicillin Resistant Staphylococcus Aureus
 pdb|4EWT|D Chain D, The Crystal Structure Of A Putative Aminohydrolase From
           Methicillin Resistant Staphylococcus Aureus
 pdb|4EWT|B Chain B, The Crystal Structure Of A Putative Aminohydrolase From
           Methicillin Resistant Staphylococcus Aureus
          Length = 392

 Score = 31.2 bits (69), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 20/149 (13%)

Query: 61  GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDG 120
           G VQ   G+   K+ V+G  GH G+ P  M  D + A +  +  L+ +            
Sbjct: 179 GYVQ--TGRAFFKLKVQGKGGH-GSSP-HMANDAIVAGSYFVTALQTVVSR--------- 225

Query: 121 RXXXXXXXXXXXXXVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 180
                         V T+G         NVI   V    D+R + DA + T+  E+    
Sbjct: 226 ------RLSPFETGVVTIGSFDGK-GQFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLS 278

Query: 181 YQICEKRSVSCIVERKHDANAVMCDADLS 209
             + +   V+C +E   D  A+  D + +
Sbjct: 279 KGLEDMYGVTCTLEYNDDYPALYNDPEFT 307


>pdb|1X7I|A Chain A, Crystal Structure Of The Native Copper Homeostasis Protein
           (Cutcm) With Calcium Binding From Shigella Flexneri 2a
           Str. 301
 pdb|1X7I|B Chain B, Crystal Structure Of The Native Copper Homeostasis Protein
           (Cutcm) With Calcium Binding From Shigella Flexneri 2a
           Str. 301
          Length = 256

 Score = 27.7 bits (60), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 208 LSSQLKSASYAALKRMTGATQH-EIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGG 261
           L+S  KS +   L ++     H + P+IM+GAG  A  + H    G+L V    G
Sbjct: 146 LTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAG 200


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.134    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,978,226
Number of Sequences: 62578
Number of extensions: 298313
Number of successful extensions: 710
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 684
Number of HSP's gapped (non-prelim): 10
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)