Query 022920
Match_columns 290
No_of_seqs 174 out of 1914
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:06:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022920.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022920hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03176 AllC allantoate amid 100.0 9.2E-43 2E-47 323.0 30.9 256 3-289 147-402 (406)
2 PRK13799 unknown domain/N-carb 100.0 2.1E-41 4.5E-46 326.3 32.0 259 4-289 329-588 (591)
3 PRK13590 putative bifunctional 100.0 7.8E-41 1.7E-45 322.5 31.9 258 3-289 328-586 (591)
4 TIGR01879 hydantase amidase, h 100.0 1.9E-37 4.2E-42 287.5 32.2 254 6-289 148-401 (401)
5 PRK12891 allantoate amidohydro 100.0 7.1E-37 1.5E-41 284.8 32.0 255 3-289 154-408 (414)
6 PRK12892 allantoate amidohydro 100.0 1.4E-34 3E-39 269.3 31.8 253 8-290 158-410 (412)
7 COG1473 AbgB Metal-dependent a 100.0 4.3E-34 9.4E-39 260.2 25.5 224 39-286 156-384 (392)
8 PRK12890 allantoate amidohydro 100.0 1.2E-32 2.6E-37 256.5 31.8 256 6-289 155-410 (414)
9 PRK12893 allantoate amidohydro 100.0 6.7E-32 1.4E-36 251.4 31.6 251 7-289 158-408 (412)
10 PRK09290 allantoate amidohydro 100.0 2E-30 4.3E-35 241.5 31.8 255 7-289 155-409 (413)
11 PLN02280 IAA-amino acid hydrol 100.0 5.4E-30 1.2E-34 241.1 27.1 227 39-290 238-474 (478)
12 PLN02693 IAA-amino acid hydrol 100.0 1.1E-29 2.4E-34 237.2 25.6 224 39-289 188-420 (437)
13 PRK07338 hypothetical protein; 100.0 2.6E-26 5.6E-31 213.2 23.1 198 62-289 196-397 (402)
14 PRK08588 succinyl-diaminopimel 99.9 3E-26 6.6E-31 210.9 22.4 206 61-290 165-376 (377)
15 TIGR01891 amidohydrolases amid 99.9 7.8E-26 1.7E-30 207.3 23.4 189 66-277 167-361 (363)
16 PRK13013 succinyl-diaminopimel 99.9 1.5E-25 3.2E-30 209.7 21.4 214 62-290 193-422 (427)
17 PRK06915 acetylornithine deace 99.9 1.6E-25 3.5E-30 209.1 20.0 212 62-290 198-418 (422)
18 PRK08651 succinyl-diaminopimel 99.9 2.7E-25 5.9E-30 205.7 20.5 209 62-289 177-390 (394)
19 PRK06133 glutamate carboxypept 99.9 8E-25 1.7E-29 203.6 20.9 201 62-290 203-407 (410)
20 TIGR01883 PepT-like peptidase 99.9 1.6E-24 3.4E-29 198.4 21.1 193 62-286 165-360 (361)
21 PRK13009 succinyl-diaminopimel 99.9 3E-24 6.5E-29 197.5 22.9 200 62-290 173-374 (375)
22 PRK00466 acetyl-lysine deacety 99.9 1.3E-24 2.7E-29 198.0 19.3 189 61-289 152-342 (346)
23 PRK08652 acetylornithine deace 99.9 2.2E-24 4.7E-29 196.3 20.5 197 62-290 148-345 (347)
24 TIGR01910 DapE-ArgE acetylorni 99.9 4.2E-25 9.1E-30 203.3 15.9 200 61-280 171-374 (375)
25 TIGR01246 dapE_proteo succinyl 99.9 1.2E-23 2.6E-28 193.3 22.2 199 62-289 170-370 (370)
26 PRK07473 carboxypeptidase; Pro 99.9 1.8E-23 4E-28 192.4 22.0 194 61-289 178-375 (376)
27 PRK13983 diaminopimelate amino 99.9 1.5E-23 3.3E-28 194.3 20.6 204 62-288 189-399 (400)
28 PRK13381 peptidase T; Provisio 99.9 8.9E-23 1.9E-27 189.6 24.2 196 61-289 201-402 (404)
29 COG0624 ArgE Acetylornithine d 99.9 3.2E-23 7E-28 192.9 19.5 227 39-290 170-407 (409)
30 PRK07522 acetylornithine deace 99.9 3E-23 6.4E-28 191.5 19.1 205 61-289 169-383 (385)
31 TIGR03320 ygeY M20/DapE family 99.9 1.1E-22 2.3E-27 188.6 19.6 205 61-290 173-394 (395)
32 PRK05469 peptidase T; Provisio 99.9 2.3E-22 5.1E-27 187.0 21.5 192 65-289 207-404 (408)
33 TIGR03526 selenium_YgeY putati 99.9 1.5E-22 3.2E-27 187.6 19.6 205 61-290 173-394 (395)
34 PRK08262 hypothetical protein; 99.9 1.2E-22 2.6E-27 193.0 19.4 212 64-289 236-483 (486)
35 PRK05111 acetylornithine deace 99.9 1.1E-22 2.4E-27 187.7 18.3 200 63-289 175-380 (383)
36 TIGR01892 AcOrn-deacetyl acety 99.9 1.3E-22 2.8E-27 185.9 18.7 197 63-285 162-363 (364)
37 PRK06837 acetylornithine deace 99.9 2.6E-22 5.7E-27 187.7 19.6 212 62-290 202-422 (427)
38 TIGR01880 Ac-peptdase-euk N-ac 99.9 5.2E-22 1.1E-26 184.3 20.5 207 62-289 185-397 (400)
39 PRK09133 hypothetical protein; 99.9 4.5E-22 9.7E-27 188.4 19.9 214 62-289 219-468 (472)
40 PRK13004 peptidase; Reviewed 99.9 6E-22 1.3E-26 183.8 18.5 205 61-290 175-396 (399)
41 PRK08737 acetylornithine deace 99.9 1.7E-21 3.7E-26 178.5 20.6 202 61-288 159-363 (364)
42 PRK13007 succinyl-diaminopimel 99.9 2.3E-21 5E-26 176.8 19.2 189 62-286 160-351 (352)
43 PRK07906 hypothetical protein; 99.9 4.6E-21 1E-25 179.3 19.0 208 62-288 184-425 (426)
44 PRK06446 hypothetical protein; 99.9 7.7E-21 1.7E-25 178.3 19.8 217 61-289 173-433 (436)
45 TIGR01902 dapE-lys-deAc N-acet 99.9 7.3E-21 1.6E-25 172.6 18.3 187 62-289 142-333 (336)
46 TIGR01882 peptidase-T peptidas 99.9 1.9E-20 4.2E-25 174.3 19.5 190 66-288 210-405 (410)
47 PRK04443 acetyl-lysine deacety 99.9 2.8E-20 6E-25 169.6 19.6 192 62-289 153-348 (348)
48 TIGR01893 aa-his-dipept aminoa 99.9 6.6E-20 1.4E-24 173.8 21.7 189 66-289 192-476 (477)
49 PRK08201 hypothetical protein; 99.9 6E-20 1.3E-24 173.2 20.9 218 61-289 191-453 (456)
50 TIGR01900 dapE-gram_pos succin 99.8 6.1E-20 1.3E-24 168.9 18.5 185 62-271 174-373 (373)
51 PRK08596 acetylornithine deace 99.8 1.4E-19 3E-24 169.1 19.8 207 65-290 184-416 (421)
52 PRK07318 dipeptidase PepV; Rev 99.8 7.3E-20 1.6E-24 173.0 17.1 197 69-289 255-464 (466)
53 PRK06156 hypothetical protein; 99.8 2.1E-19 4.6E-24 171.8 19.5 199 71-289 300-514 (520)
54 PRK09104 hypothetical protein; 99.8 3.6E-19 7.7E-24 168.3 20.6 216 62-289 200-461 (464)
55 TIGR01886 dipeptidase dipeptid 99.8 4.6E-19 9.9E-24 167.5 20.0 198 70-289 255-464 (466)
56 PRK07907 hypothetical protein; 99.8 9.8E-19 2.1E-23 164.7 21.1 218 62-289 193-446 (449)
57 PRK07205 hypothetical protein; 99.8 2.8E-18 6.1E-23 161.4 19.5 193 71-289 239-441 (444)
58 PRK07079 hypothetical protein; 99.8 6.7E-18 1.5E-22 159.8 22.0 216 62-289 200-454 (469)
59 PRK15026 aminoacyl-histidine d 99.8 5.7E-17 1.2E-21 153.4 18.7 188 67-289 199-482 (485)
60 PF07687 M20_dimer: Peptidase 99.8 1.6E-17 3.4E-22 126.4 12.0 109 65-186 2-110 (111)
61 TIGR01887 dipeptidaselike dipe 99.7 2.2E-15 4.8E-20 141.6 19.8 190 71-286 244-447 (447)
62 KOG2275 Aminoacylase ACY1 and 99.7 3.9E-15 8.5E-20 133.2 17.1 206 63-289 203-417 (420)
63 PRK08554 peptidase; Reviewed 99.6 2.2E-14 4.8E-19 134.5 15.1 131 147-290 301-437 (438)
64 COG2195 PepD Di- and tripeptid 99.5 1.6E-13 3.4E-18 125.9 13.0 193 65-288 213-410 (414)
65 KOG2276 Metalloexopeptidases [ 99.0 1.8E-08 3.9E-13 90.2 16.7 233 45-289 191-470 (473)
66 PF01546 Peptidase_M20: Peptid 97.8 4.1E-05 9E-10 63.1 6.0 79 202-287 108-188 (189)
67 TIGR03107 glu_aminopep glutamy 97.1 0.0019 4.2E-08 58.9 7.8 78 202-289 261-341 (350)
68 PRK09961 exoaminopeptidase; Pr 97.0 0.0023 5.1E-08 58.3 7.1 80 201-289 251-333 (344)
69 PRK09864 putative peptidase; P 96.7 0.008 1.7E-07 54.9 8.2 79 202-289 260-341 (356)
70 COG1363 FrvX Cellulase M and r 96.4 0.013 2.7E-07 53.4 7.5 78 203-289 266-346 (355)
71 TIGR03106 trio_M42_hydro hydro 95.2 0.075 1.6E-06 48.5 7.3 75 202-286 262-339 (343)
72 COG4187 RocB Arginine degradat 94.0 0.22 4.8E-06 46.1 7.3 151 14-184 172-326 (553)
73 PF05343 Peptidase_M42: M42 gl 93.7 0.073 1.6E-06 47.4 3.7 69 203-280 220-291 (292)
74 PRK02256 putative aminopeptida 91.4 0.49 1.1E-05 44.8 6.3 76 204-287 380-460 (462)
75 TIGR01893 aa-his-dipept aminoa 87.0 1.6 3.4E-05 41.7 6.3 43 133-182 337-379 (477)
76 PRK02813 putative aminopeptida 84.0 2.8 6E-05 39.5 6.2 76 204-287 346-426 (428)
77 PTZ00371 aspartyl aminopeptida 78.4 6.6 0.00014 37.4 6.6 76 204-287 373-453 (465)
78 PRK15026 aminoacyl-histidine d 56.8 33 0.00072 32.9 6.6 52 134-194 344-395 (485)
79 TIGR02159 PA_CoA_Oxy4 phenylac 47.1 1.2E+02 0.0026 23.9 7.3 65 149-219 21-86 (146)
80 PF03755 YicC_N: YicC-like fam 38.2 1.7E+02 0.0037 23.3 7.0 63 156-220 30-95 (159)
81 TIGR02945 SUF_assoc FeS assemb 33.1 1.8E+02 0.0039 20.9 6.0 31 153-183 37-67 (99)
82 TIGR03406 FeS_long_SufT probab 32.0 2.8E+02 0.0061 22.6 9.6 30 154-183 114-143 (174)
83 COG1828 PurS Phosphoribosylfor 29.5 28 0.00061 24.7 1.0 20 5-24 14-33 (83)
84 PRK06156 hypothetical protein; 28.6 1.2E+02 0.0025 29.4 5.4 40 136-178 241-281 (520)
85 cd06406 PB1_P67 A PB1 domain i 27.8 1E+02 0.0022 21.7 3.6 54 156-212 10-65 (80)
86 PF09650 PHA_gran_rgn: Putativ 20.3 1.9E+02 0.0041 20.6 3.9 30 165-194 7-36 (87)
No 1
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=9.2e-43 Score=323.01 Aligned_cols=256 Identities=30% Similarity=0.449 Sum_probs=221.9
Q ss_pred CcccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCC
Q 022920 3 MDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGH 82 (290)
Q Consensus 3 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~H 82 (290)
+..+|.+|+|+.|||+++||++. .+.... +.+.+|+|+|++||+.|+..+.+.|++++++|..+++|+|+|+++|
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~--~~~~~~---~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaH 221 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLR--KAPTVR---DDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANH 221 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcc--cccccc---cccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCC
Confidence 45689999999999999999874 334332 4789999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEec
Q 022920 83 AGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLR 162 (290)
Q Consensus 83 a~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR 162 (290)
+|..||..++||+.++++++.+++++..+ .....++|||.|+++|++.|+||++|++.+|+|
T Consensus 222 ag~~p~~~r~dAi~aaa~~i~~l~~~~~~------------------~~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR 283 (406)
T TIGR03176 222 AGTTPMSYRRDTVYAFSRICTQSIERAKE------------------IGDPLVLTFGKVEPVPNTVNVVPGETTFTIDCR 283 (406)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHHHHh------------------cCCCcEEEEEEEEEcCCceEEECCeEEEEEEee
Confidence 99867434699999999999999887543 122568999999965899999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHH
Q 022920 163 AIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA 242 (290)
Q Consensus 163 ~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~ 242 (290)
+.+.+..+.+.++|++.+++++..+++++++......+|...|+++++.+++++++..+. ...++++|++|+
T Consensus 284 ~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~~~~p~~~d~~lv~~l~~a~~~~~~~--------~~~~~sggg~Da 355 (406)
T TIGR03176 284 HTDAAVLRNFTKELENDMKAIADEMDITIDIDLWMDEAPVPMNKEIVAIIEQLAKAEKLN--------YRLMHSGAGHDA 355 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCCCCCCHHHHHHHHHHHHHcCCC--------ceecCcccHHHH
Confidence 999999999999999999999999999988875444556677889999999999886321 223357789999
Q ss_pred HHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 243 MAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 243 ~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
++|++.+|++|+|+|+.++.+|+++||+..+++..++.+|..++.+|
T Consensus 356 ~~~~~~vP~~~ifgp~~~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l 402 (406)
T TIGR03176 356 QIFAPRVPTAMIFVPSIGGISHNPAERTNIEDLVEGVKTLADMLYEL 402 (406)
T ss_pred HHHHHHCCEEEEEEeCCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987777999999999999999999999999876
No 2
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=326.28 Aligned_cols=259 Identities=37% Similarity=0.591 Sum_probs=226.4
Q ss_pred cccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCC
Q 022920 4 DNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHA 83 (290)
Q Consensus 4 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha 83 (290)
..+|.+|+||.++|+++|+++ ..++.....+..+.+|||+|||||+.|+..+.+.|+|++++|..+|+|+|+|+++|+
T Consensus 329 ~~~d~~G~~~~~~l~~~g~~~--~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHa 406 (591)
T PRK13799 329 DIKDADGISLREAIQHAGHCI--DAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHA 406 (591)
T ss_pred hccCCCCCCHHHHHHHcCCCh--hhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCC
Confidence 567899999999999999986 455555555678999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecC
Q 022920 84 GTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRA 163 (290)
Q Consensus 84 ~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~ 163 (290)
|.+||+.++||+.++++++..++++..+. +. ...++|||.|++++++.|+||++|++.+|+|+
T Consensus 407 g~~Pm~~r~dAi~aaa~ii~~l~~~~~~~----------------~~-~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~ 469 (591)
T PRK13799 407 GTTPMDMRKDAAAAAAEIALYIEKRAAQD----------------QH-ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRA 469 (591)
T ss_pred CCCChhhchhHHHHHHHHHHHHHHHHHhc----------------CC-CCcEEEEEEEEecCCCCceECCEEEEEEEeeC
Confidence 98787779999999999999999976531 11 24688999999755699999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHH
Q 022920 164 IDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAM 243 (290)
Q Consensus 164 ~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~ 243 (290)
.+.++.+.+.++|++.+++++..++++++++.....+++.+|+++++.+.+++++. |. ....+++++|+|++
T Consensus 470 ~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~~~~~~~~~~d~~lv~~~~~a~~~~-G~-------~~~~~~sgag~Da~ 541 (591)
T PRK13799 470 ATDEIRDAAVADILAEIAAIAARRGIEYKAELAMKAAAAPCAPELMKQLEAATDAA-GV-------PLFELASGAGHDAM 541 (591)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCCCcCCCHHHHHHHHHHHHHc-CC-------CceecCcchHHHHH
Confidence 99999999999999999999999999988887677788999999999999888763 32 12334577899999
Q ss_pred HHhhhCCeEEEEEecCC-CCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 244 AMSHLTKVGMLFVRCRG-GISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 244 ~~~~~~P~~~~f~g~~~-~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+|++.+|++|+|+|+++ +.+|+++||+..+++..++.+|..++.++
T Consensus 542 ~~a~~~p~amif~~~g~~g~sHsp~E~v~~edL~~g~~vl~~~l~~l 588 (591)
T PRK13799 542 KIAEIMDQAMLFTRCGNAGISHNPLESMTADDMELSADAFLDFLNNF 588 (591)
T ss_pred HHHhhCCEEEEEEecCCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999865 56899999999999999999999998875
No 3
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=7.8e-41 Score=322.52 Aligned_cols=258 Identities=35% Similarity=0.530 Sum_probs=226.7
Q ss_pred CcccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCC
Q 022920 3 MDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGH 82 (290)
Q Consensus 3 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~H 82 (290)
+..+|.+|+|+.|+|+++||++ ..+.+...+++.+.+|+|+|||||+.|+..+.+.|++++.+|..+|+|+|+|+++|
T Consensus 328 ~~~~d~~g~~~~~al~~~g~~~--~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaH 405 (591)
T PRK13590 328 LDQKDADGITMREAMQHAGLCI--DDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASH 405 (591)
T ss_pred HhccCCCCCCHHHHHHHcCCCh--hhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCC
Confidence 3457899999999999999987 45666667778999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEec
Q 022920 83 AGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLR 162 (290)
Q Consensus 83 a~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR 162 (290)
+|.+||+.+.||+.++++++..++++... ...+++|||.++++|++.||||++|++++|+|
T Consensus 406 ag~~P~~~r~dAi~aaa~~i~~l~~~~~~-------------------~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR 466 (591)
T PRK13590 406 AGTTPMDRRRDAAAAVAELALYVEQRAAQ-------------------DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIR 466 (591)
T ss_pred CCCCCchhcccHHHHHHHHHHHHHHHHhc-------------------CCCcEEEEEEEEECCCCCceECCEEEEEEEee
Confidence 99878656899999999999999886432 12357899999865679999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHH
Q 022920 163 AIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA 242 (290)
Q Consensus 163 ~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~ 242 (290)
+.+.+..+.+.++|++.+++++..+|++++++.....+++.+|+.+++.+.+++++. |.. ...++++||+|+
T Consensus 467 ~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~~~~~~~~~~d~~lv~~~~~aa~~~-G~~-------~~~~~sggg~Da 538 (591)
T PRK13590 467 APTDAQRDAMVADVLAELEAICERRGLRYTLEETMRAAAAPSAPAWQQRWEAAVAAL-GLP-------LFRMPSGAGHDA 538 (591)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCcCCCHHHHHHHHHHHHHc-CCC-------cccCCcchhHHH
Confidence 999999999999999999999998999999887777888999999999999999874 431 223457799999
Q ss_pred HHHhhhCCeEEEEEecC-CCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 243 MAMSHLTKVGMLFVRCR-GGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 243 ~~~~~~~P~~~~f~g~~-~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
++|++.+|++|+|+|+. ++.+|+++||+..+++..++.+|..++.++
T Consensus 539 ~~~a~~~p~~mifgpg~~~g~sH~p~E~v~~edL~~g~~vl~~ll~~l 586 (591)
T PRK13590 539 MKLHEIMPQAMLFVRGENAGISHNPLESSTADDMQLAVQAFQHLLDQL 586 (591)
T ss_pred HHHHHHCCEEEEEEeeCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999998885 367999999999999999999999998765
No 4
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.9e-37 Score=287.51 Aligned_cols=254 Identities=36% Similarity=0.543 Sum_probs=216.2
Q ss_pred cCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCC
Q 022920 6 SFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGT 85 (290)
Q Consensus 6 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~ 85 (290)
.|.+|+|+.++|++.|++... ..+ ..+..+.+|+|+|||||+.++..+.+.+++.+++|..|++|+++|+++|++.
T Consensus 148 ~~~~g~~~~~~~~~~g~~~~~--~~~--~~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~ 223 (401)
T TIGR01879 148 CDAKGISFAEAMKACGPDLPN--QPL--RPRGDIKAYVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGT 223 (401)
T ss_pred cCCCCCCHHHHHHHcCCCccc--ccc--cccccccEEEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCC
Confidence 567899999999999976421 112 2234678999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCC
Q 022920 86 VPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAID 165 (290)
Q Consensus 86 ~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~ 165 (290)
.||+.++||+.++++++.+|+++..+. ..+.+.++|.|++++.+.|+||++|++.+|+|+.+
T Consensus 224 ~p~~~g~nAi~~aa~~i~~l~~l~~~~------------------~~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p 285 (401)
T TIGR01879 224 TPMSLRRDPLVAASRIIHQVEEKAKRM------------------GDPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTD 285 (401)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhc------------------CCCeEEEEEEEEecCCceEEECCEEEEEEEeeCCC
Confidence 574468999999999999999876431 12457899999985578999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHH
Q 022920 166 DAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAM 245 (290)
Q Consensus 166 ~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~ 245 (290)
.++.+.+.++|++++++++...+++++++....++++.+|+++++.+.++++++ |.. ....++++++|+++|
T Consensus 286 ~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lv~~l~~a~~~~-g~~-------~~~~~~~ggtDa~~~ 357 (401)
T TIGR01879 286 AAVLRDFTQQLENDIKAISDERDIGIDIERWMDEEPVPCSEELVAALTELCERL-GYN-------ARVMVSGAGHDAQIL 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCceEEEEEeecCCCcCCCHHHHHHHHHHHHHc-CCC-------ccccccchHHHHHHH
Confidence 999999999999999998888888888876667888889999999999999874 432 122246689999999
Q ss_pred hhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 246 SHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 246 ~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
++..|.+++|+|+..+.+|++|||+..+++...+++|..++.+|
T Consensus 358 ~~~~~~~v~fgPg~~~~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 358 APIVPIGMIFIPSINGISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred HhhCCEEEEEecCCCCCcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 98888888898887677999999999999999999999998765
No 5
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.1e-37 Score=284.76 Aligned_cols=255 Identities=31% Similarity=0.410 Sum_probs=217.4
Q ss_pred CcccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCC
Q 022920 3 MDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGH 82 (290)
Q Consensus 3 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~H 82 (290)
+..+|.+|+++.++|.+.|+++.. ...++.+.+|+|+|++||+.++..+.+.+++.+++|..+|+|+++|+++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aH 227 (414)
T PRK12891 154 LSRRDDTGRTLGEHLARIGYAGAE------PVGGYPVHAAYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAH 227 (414)
T ss_pred HhccCCCCCCHHHHHHHCCCCccc------ccccCCCCEEEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCC
Confidence 345789999999999999997421 22234578999999999999999898889999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEec
Q 022920 83 AGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLR 162 (290)
Q Consensus 83 a~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR 162 (290)
+|..|++.|+|||..+++++.+|+++..+. ..+.++|+|.|++++++.|+||++|++.+|+|
T Consensus 228 a~~~P~~~g~nAI~~aa~~i~~l~~~~~~~------------------~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR 289 (414)
T PRK12891 228 AGTTPMAFRRDALVGAARMIAFLDALGRRD------------------APDARATVGMIDARPNSRNTVPGECFFTVEFR 289 (414)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHHHHhc------------------CCCeEEEEEEEEeeCCCcceECCeEEEEEEee
Confidence 986584368999999999999999875431 12568999999984479999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHH
Q 022920 163 AIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA 242 (290)
Q Consensus 163 ~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~ 242 (290)
+.+.++.+.++++|++++++++..+++++++.....+|++.+|+++++.+++++++ .|.+ .....++|++|+
T Consensus 290 ~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lv~~l~~a~~~-~G~~-------~~~~~~~ggtDa 361 (414)
T PRK12891 290 HPDDAVLDRLDAALRAELARIADETGLRADIEQIFGYAPAPFAPGCIDAVRDAARA-LGLS-------HMDIVSGAGHDA 361 (414)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEEecCCCcCCCHHHHHHHHHHHHH-cCCC-------ceecCCcchHHH
Confidence 99999999999999999999988889988887767788899999999999999865 3432 122346689999
Q ss_pred HHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 243 MAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 243 ~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.++...+|++++|+|+..+.+|+++||+.++++...+++|..++.++
T Consensus 362 ~~~~~giPt~~~~gp~~~~~aH~~dE~v~i~~l~~~~~il~~~l~~~ 408 (414)
T PRK12891 362 CFAARGAPTGMIFVPCVDGLSHNEAEAITPEWFAAGADVLLRAVLQS 408 (414)
T ss_pred HHHHhhCCEEEEEEcCCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence 99877899988898887667899999999999999999999998875
No 6
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-34 Score=269.35 Aligned_cols=253 Identities=36% Similarity=0.512 Sum_probs=213.7
Q ss_pred CCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCC
Q 022920 8 FSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVP 87 (290)
Q Consensus 8 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P 87 (290)
.+|.++.++|.+.|+.++. ... ..|....+|+++|++||+.++..+.+.+++.+++|..+++|+++|+++|++..|
T Consensus 158 ~~~~~~~~~~~~~g~~~d~--~~~--~ep~~~~~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~aHa~~~p 233 (412)
T PRK12892 158 SDGVPLRDALAAAGLAGRP--RPA--ADRARPKGYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEAGHAGTTP 233 (412)
T ss_pred CCCcCHHHHHHHcCCChhh--ccc--ccccCccEEEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEECCCCCCCC
Confidence 4788999999999998632 111 225568889999999999999888778899999999999999999999998657
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChH
Q 022920 88 MSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDA 167 (290)
Q Consensus 88 ~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~ 167 (290)
++.++||+..+++++.+|+++..+. ..+.++++|.|++++++.|+||++|++.+|+|+.+.+
T Consensus 234 ~~~g~nAi~~a~~~i~~l~~~~~~~------------------~~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~ 295 (412)
T PRK12892 234 MALRRDAGLAAAEMIAAIDEHFPRV------------------CGPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPP 295 (412)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhc------------------CCCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHH
Confidence 3368999999999999999875431 1246899999998447999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh
Q 022920 168 GRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH 247 (290)
Q Consensus 168 ~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~ 247 (290)
+.+++.++|++++++++..+++++++.....++++.+|+++++.+++++++ +|.+ . ....++|++|+++|++
T Consensus 296 ~~~~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~d~~lv~~~~~a~~~-~g~~---~----~~~~~~g~tDa~~~~~ 367 (412)
T PRK12892 296 VLQRLVALLEALCREIARRRGCRVSVDRIAEYAPAPCDAALVDALRAAAEA-AGGP---Y----LEMPSGAGHDAQNMAR 367 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCCCcCCCHHHHHHHHHHHHH-cCCC---c----cccCcchHHHHHHHHh
Confidence 999999999999999888889988887666788888999999999999988 5542 1 1123568999999988
Q ss_pred hCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 248 LTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 248 ~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
.+|++++|+|...+.+|++|||+..+++.+.+++|..++.+++
T Consensus 368 ~ip~~~~~gp~~~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~ 410 (412)
T PRK12892 368 IAPSAMLFVPSKGGISHNPAEDTSPADLAQGARVLADTLRRLA 410 (412)
T ss_pred HCCEEEEEeccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 8998888888765668999999999999999999999998763
No 7
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=4.3e-34 Score=260.18 Aligned_cols=224 Identities=24% Similarity=0.325 Sum_probs=194.0
Q ss_pred ceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcccc
Q 022920 39 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSY 118 (290)
Q Consensus 39 ~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~ 118 (290)
+++.+.+|++|+.+.++.+...|.+ +.+.+.|+|+|+|+++|++. | |.++||+.+++.++.+||.++.|.
T Consensus 156 vD~v~g~H~~p~~~~g~v~~~~G~~--~aa~d~~~i~~~GkggH~a~-P-h~~~d~i~aa~~~v~~lq~ivsr~------ 225 (392)
T COG1473 156 VDAVFGLHPGPGLPVGTVALRPGAL--MAAADEFEITFKGKGGHAAA-P-HLGIDALVAAAQLVTALQTIVSRN------ 225 (392)
T ss_pred ccEEEEecCCCCCCCceEEeecccc--eeecceEEEEEEeCCcccCC-c-ccccCHHHHHHHHHHHHHHHHhcc------
Confidence 5566669999997788888888877 89999999999999999987 9 999999999999999999999873
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Q 022920 119 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHD 198 (290)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~ 198 (290)
. +|.+ ..++++|.+++ |++.||||+++++.+++|+++.+.++.+.++|+++++.+|..+|+++++.+...
T Consensus 226 ---~-----~p~~-~~vv~vg~~~a-G~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~~~ 295 (392)
T COG1473 226 ---V-----DPLD-SAVVTVGKIEA-GTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYERG 295 (392)
T ss_pred ---c-----CCcc-CeEEEEEEecC-CCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 2 3554 78999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCC--C---CCCCCcCCCCHH
Q 022920 199 ANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG--G---ISHSPAEHVLDD 273 (290)
Q Consensus 199 ~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~--~---~~H~~~E~~~~e 273 (290)
+|++.||+++.+.+++++++..|+. .+....++ .+.||+||++|.+.+|++|+|+|... + .+|+|. |.++|
T Consensus 296 ~p~~~Nd~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~~~~~~H~p~-~~~de 371 (392)
T COG1473 296 YPPVVNDPALTDLLAEAAEEVGGEE--VVVVELPP-SMAGSEDFGYYLEKVPGAFFFLGTGSADGGTYPLHHPK-FDFDE 371 (392)
T ss_pred CCCccCCHHHHHHHHHHHHHhcccc--ceecccCC-CCCccchHHHHHHhCCeeEEEeecCcCCCCcccccCCc-CCCCH
Confidence 9999999999999999999998753 12111222 23489999999999999999999864 2 289999 78888
Q ss_pred HHHHHHHHHHHHH
Q 022920 274 DVWAAGLAVLAFL 286 (290)
Q Consensus 274 ~~~~~~~~~~~~l 286 (290)
+++..+..++..+
T Consensus 372 ~~l~~g~~~~~~~ 384 (392)
T COG1473 372 AALATGVKLLAAL 384 (392)
T ss_pred HHHHHHHHHHHHH
Confidence 8877776555443
No 8
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-32 Score=256.54 Aligned_cols=256 Identities=40% Similarity=0.559 Sum_probs=212.3
Q ss_pred cCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCC
Q 022920 6 SFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGT 85 (290)
Q Consensus 6 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~ 85 (290)
.+.+|.++.+++.+.|+..+ ........|..+..|+++|++||..+...+...+++.+++|..+++|+++|+++|+|.
T Consensus 155 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~ 232 (414)
T PRK12890 155 RDDDGTTLAEALRRIGGDPD--ALPGALRPPGAVAAFLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHAGT 232 (414)
T ss_pred cCCCCCCHHHHHHHcCCChh--hccccccCCCCccEEEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCCCc
Confidence 35678899999999998752 2122223455688899999999999887776677888999999999999999999986
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCC
Q 022920 86 VPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAID 165 (290)
Q Consensus 86 ~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~ 165 (290)
.|++.++||+..+++++.+|+++..+. ....++++|.|++++.+.|+||++|++++|+|+.+
T Consensus 233 ~P~~~g~nAI~~~~~~i~~l~~~~~~~------------------~~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p 294 (414)
T PRK12890 233 TPMDLRRDALVAAAELVTAMERRARAL------------------LHDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPD 294 (414)
T ss_pred CChhhccCHHHHHHHHHHHHHHHHHhc------------------CCCeEEEEEEEEECCCCceEECCeEEEEEEeeCCC
Confidence 583345899999999999999986541 13568899999985689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHH
Q 022920 166 DAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAM 245 (290)
Q Consensus 166 ~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~ 245 (290)
.++.+.++++|++++++.+...+++++++....++++.+|+++++.+.+++++. |.. .....++|++|+++|
T Consensus 295 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-g~~-------~~~~~~~g~tDa~~~ 366 (414)
T PRK12890 295 DAVLEAAEAALLAELEAIAAARGVRIELERLSRSEPVPCDPALVDAVEAAAARL-GYP-------SRRMPSGAGHDAAAI 366 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeecCCCcCCCHHHHHHHHHHHHHc-CCC-------ceecCCcccHHHHHH
Confidence 999999999999999998888888888876667888889999999999999774 432 112235689999999
Q ss_pred hhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 246 SHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 246 ~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.+..|.+++|+|...+.+|++|||+.++++...+++|..++.+|
T Consensus 367 ~~~gp~~~~~gp~~~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l 410 (414)
T PRK12890 367 ARIGPSAMIFVPCRGGISHNPEEAMDPEDLAAGARVLLDAVLRL 410 (414)
T ss_pred HhhCCEEEEEecCCCCCCCCcCccCCHHHHHHHHHHHHHHHHHH
Confidence 98888888888876566999999999999999999999988765
No 9
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.7e-32 Score=251.36 Aligned_cols=251 Identities=39% Similarity=0.543 Sum_probs=205.8
Q ss_pred CCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCC
Q 022920 7 FFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTV 86 (290)
Q Consensus 7 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~ 86 (290)
+.++..+.++|.+.|+.+. +..-++.+.+|+++|++||+.+...+...+++.+++|..+++|+++|+++|+|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~aHas~~ 231 (412)
T PRK12893 158 DADGITLGEALARIGYRGT------ARVGRRAVDAYLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQAAHAGTT 231 (412)
T ss_pred CCCCCCHHHHHHHcCCCcc------cccccCCccEEEEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEECCCcCCC
Confidence 3456666777777776541 1112356788999999999887776666778889999999999999999999865
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCCh
Q 022920 87 PMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDD 166 (290)
Q Consensus 87 P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~ 166 (290)
|++.|+||+.++++++.+|+++..+. ....++++|.|++++++.|+||++|++.+|+|+.+.
T Consensus 232 p~~~G~NAI~~a~~~i~~l~~~~~~~------------------~~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~ 293 (412)
T PRK12893 232 PMAMRRDALVAAARIILAVERIAAAL------------------APDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDD 293 (412)
T ss_pred cchhccCHHHHHHHHHHHHHHHHHhc------------------CCCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCH
Confidence 72279999999999999999876531 124688999999855899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHh
Q 022920 167 AGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMS 246 (290)
Q Consensus 167 ~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~ 246 (290)
++.+++.++|++++++.+..+++++++.....++++.+|+++++.+++++++. |.+ .....++|++|+++|+
T Consensus 294 ~~~~~i~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~l~~~l~~~~~~~-g~~-------~~~~~~~g~tD~~~~~ 365 (412)
T PRK12893 294 ARLDAMEAALRAACAKIAAARGVQVTVETVWDFPPVPFDPALVALVEAAAEAL-GLS-------HMRMVSGAGHDAMFLA 365 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCCcCCCHHHHHHHHHHHHHc-CCC-------ccccCCccHHHHHHHH
Confidence 99999999999999998888888888876567888999999999999988764 432 1122356899999999
Q ss_pred hhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 247 HLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 247 ~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+.+|++++|+|...+.+|++|||+..+++...+.+|..++.++
T Consensus 366 ~~~p~~v~~gp~~~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~ 408 (412)
T PRK12893 366 RVAPAAMIFVPCRGGISHNEAEDTEPADLAAGANVLLHAVLEL 408 (412)
T ss_pred hhCCEEEEEeecCCCCCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 8899888888776566899999999999999999999998876
No 10
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-30 Score=241.52 Aligned_cols=255 Identities=38% Similarity=0.541 Sum_probs=203.3
Q ss_pred CCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCC
Q 022920 7 FFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTV 86 (290)
Q Consensus 7 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~ 86 (290)
+.++..+.++|.+.|+++ +.+-..-..|..+.+|++.|+++|..++..+....++.+++|..+++|+++|+++|++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~--d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~ 232 (413)
T PRK09290 155 DADGVSFAEALAAIGYDG--DEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEANHAGTT 232 (413)
T ss_pred CCCCCCHHHHHHHcCCCh--hhccccccCCCCccEEEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECCCCCCC
Confidence 345555666666667654 110000013566788999999988888777665567788999999999999999998844
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCCh
Q 022920 87 PMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDD 166 (290)
Q Consensus 87 P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~ 166 (290)
|.+.|+|||..+++++.+|+++..+. ..+.+++++.+++++.+.|+||++|++.+|+|+.+.
T Consensus 233 P~~~g~NAI~~~~~~i~~l~~l~~~~------------------~~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~ 294 (413)
T PRK09290 233 PMALRRDALLAAAEIILAVERIAAAH------------------GPDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDD 294 (413)
T ss_pred CchhccCHHHHHHHHHHHHHHHHHhc------------------CCCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCH
Confidence 72378999999999999998875431 124688999999745899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHh
Q 022920 167 AGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMS 246 (290)
Q Consensus 167 ~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~ 246 (290)
++.+.+.++|++++++.+...++++++.....+|++.+|+++++.+++++++. |.+ . ....++|++|+++|.
T Consensus 295 e~~e~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~d~~lv~~l~~a~~~~-g~~---~----~~~~~~g~tDa~~~~ 366 (413)
T PRK09290 295 AVLDALVAELRAAAEAIAARRGVEVEIELISRRPPVPFDPGLVAALEEAAERL-GLS---Y----RRLPSGAGHDAQILA 366 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCCccCCHHHHHHHHHHHHHc-CCC---c----cccCCccchHHHHHh
Confidence 99999999999999998887888888876667888888999999999999765 432 1 112356899999998
Q ss_pred hhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 247 HLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 247 ~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+.+|++++|+|...+.+|++|||+.++++...+++|..++.+|
T Consensus 367 ~~iP~~~~~gp~~~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l 409 (413)
T PRK09290 367 AVVPTAMIFVPSVGGISHNPAEFTSPEDCAAGANVLLHALLEL 409 (413)
T ss_pred ccCCEEEEEeccCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence 7899988888766556899999999999999999999998876
No 11
>PLN02280 IAA-amino acid hydrolase
Probab=99.97 E-value=5.4e-30 Score=241.12 Aligned_cols=227 Identities=18% Similarity=0.234 Sum_probs=185.0
Q ss_pred ceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcccc
Q 022920 39 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSY 118 (290)
Q Consensus 39 ~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~ 118 (290)
+...+.+|+.++.+.+..+.+.+.. ++|..+++|+++|+++|++. | +.|+||+.++++++.+++++..+.
T Consensus 238 ~d~~~~~h~~~~~p~g~ig~~~~~~--~~G~~~~~I~v~Gk~aHas~-P-~~G~NAI~~aa~li~~l~~l~~r~------ 307 (478)
T PLN02280 238 VEAIFAVHVSHEHPTAVIGSRPGPL--LAGCGFFRAVISGKKGRAGS-P-HHSVDLILAASAAVISLQGIVSRE------ 307 (478)
T ss_pred CCEEEEEecCCCCCCceeEeccccc--ccceeEEEEEEECcchhcCC-c-ccCcCHHHHHHHHHHHHHHHHhcc------
Confidence 3456669986554444445555555 77999999999999999997 9 999999999999999999986542
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe--
Q 022920 119 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-- 196 (290)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-- 196 (290)
. ++. ...++++|.|++ |.+.|+||++|++.+|+|+.+.+..+.+.++|++++++++..+|++++++..
T Consensus 308 ---~-----~~~-~~~tvnvg~I~G-G~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~ 377 (478)
T PLN02280 308 ---A-----NPL-DSQVVSVTTMDG-GNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEK 377 (478)
T ss_pred ---c-----CCC-CCcEEEEEEEEc-cCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecc
Confidence 1 133 357899999998 8999999999999999999999999999999999999988888998877652
Q ss_pred --ecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCC---C---CCCCCcC
Q 022920 197 --HDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG---G---ISHSPAE 268 (290)
Q Consensus 197 --~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~---~---~~H~~~E 268 (290)
..+|++.+++++++.+++++.+.+|.+ .+.. .+ +.+|++||++|.+.+|++++++|.++ + .+|+++|
T Consensus 378 ~~~~~pp~~n~~~l~~~~~~~a~~~~G~~--~~~~-~~--~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e 452 (478)
T PLN02280 378 QNTIYPPTVNNDAMYEHVRKVAIDLLGPA--NFTV-VP--PMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYF 452 (478)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHhcCcc--cccc-CC--CCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCC
Confidence 347899999999999999998876653 1211 12 24589999999989999988877532 2 5899999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcC
Q 022920 269 HVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 269 ~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
++.++++..++.+|..++.+++
T Consensus 453 ~id~~~L~~~~~~~~~~~~~~l 474 (478)
T PLN02280 453 MIDEDVLPIGAAVHAAIAERYL 474 (478)
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988887653
No 12
>PLN02693 IAA-amino acid hydrolase
Probab=99.97 E-value=1.1e-29 Score=237.22 Aligned_cols=224 Identities=20% Similarity=0.240 Sum_probs=178.1
Q ss_pred ceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcccc
Q 022920 39 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSY 118 (290)
Q Consensus 39 ~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~ 118 (290)
.+..+..|.+++.+.+......|.+ ++|..+++|+++|+++|+|. | +.|+|||..+++++.+|+++..+.
T Consensus 188 ~~~iig~h~~p~~~~g~~~~~~g~~--~~G~~~~~i~v~Gk~aHaa~-P-~~G~nAI~~aa~~i~~l~~~~~~~------ 257 (437)
T PLN02693 188 VEAIFGIHLSPRTPFGKAASRAGSF--MAGAGVFEAVITGKGGHAAI-P-QHTIDPVVAASSIVLSLQQLVSRE------ 257 (437)
T ss_pred CCEEEEEecCCCCCCeeEEeccCcc--cccceEEEEEEEcccccCCC-C-CCCcCHHHHHHHHHHHHHHHhccc------
Confidence 3456669998876655444445555 78999999999999999997 9 999999999999999999986542
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe--
Q 022920 119 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-- 196 (290)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-- 196 (290)
. ++. ...++++|.|++ |.+.|+||++|++.+|+|+.+.+ +.+.++|++++++++..++++++++..
T Consensus 258 ---~-----~~~-~~~ti~vg~i~G-G~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~ 325 (437)
T PLN02693 258 ---T-----DPL-DSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPN 325 (437)
T ss_pred ---C-----CCC-CCcEEEEEEEEc-CCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeec
Confidence 1 233 367999999998 89999999999999999999874 689999999999988888888877753
Q ss_pred --ecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCC---C--CCCCCcCC
Q 022920 197 --HDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG---G--ISHSPAEH 269 (290)
Q Consensus 197 --~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~---~--~~H~~~E~ 269 (290)
..++++.+|+++++.+++++++.+|.+ .+. ... +.+|++||++|++.+|++|+++|+++ + .+|+++|+
T Consensus 326 ~~~~~~~~~nd~~l~~~~~~~~~~~~G~~--~~~-~~~--~~~gseDf~~~~~~vP~~~~~lG~~~~~~~~~~~H~~~f~ 400 (437)
T PLN02693 326 GREPMPPTVNNMDLYKQFKKVVRDLLGQE--AFV-EAA--PEMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYR 400 (437)
T ss_pred CccCCCCccCCHHHHHHHHHHHHHhcCCc--cee-ecC--CCceechHHHHHHHhhhhEEEEecCCCCCCCCCCCCCCcC
Confidence 246788899999999999999987753 121 112 24589999999999999999999863 1 58999976
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 022920 270 VLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 270 ~~~e~~~~~~~~~~~~l~~l 289 (290)
+.++.+..++.++..++.++
T Consensus 401 ~de~~l~~~~~~~~~~~~~~ 420 (437)
T PLN02693 401 INEDVLPYGAAIHATMAVQY 420 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 55555556666777666654
No 13
>PRK07338 hypothetical protein; Provisional
Probab=99.95 E-value=2.6e-26 Score=213.16 Aligned_cols=198 Identities=20% Similarity=0.205 Sum_probs=162.4
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|+|..| +.|.||+..+++++.+|+++..+ . ...++|+|.|
T Consensus 196 v~~~~kG~~~~~v~v~G~~aHs~~~p-~~g~nAi~~~~~~i~~l~~l~~~------------------~-~~~t~~vg~i 255 (402)
T PRK07338 196 LAGARKGSGNFTIVVTGRAAHAGRAF-DEGRNAIVAAAELALALHALNGQ------------------R-DGVTVNVAKI 255 (402)
T ss_pred EEeecceeEEEEEEEEeEcccCCCCc-ccCccHHHHHHHHHHHHHhhhcc------------------C-CCcEEEEEEE
Confidence 44568899999999999999999668 79999999999999999887542 1 2468999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCC---CHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMC---DADLSSQLKSASYA 218 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~---d~~l~~~~~~~~~~ 218 (290)
++ |.+.|+||++|++++|+|+.+.++.+++.++|++++++.+...++++++.....+||+.. ++.+++.+++++++
T Consensus 256 ~g-G~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~ 334 (402)
T PRK07338 256 DG-GGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHGGFGRPPKPIDAAQQRLFEAVQACGAA 334 (402)
T ss_pred ec-CCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEccccCCCCCCCcchHHHHHHHHHHHHH
Confidence 98 899999999999999999999999999999999999988766787777654334566543 34688998887766
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
. |.. .....++|++|++++... +|+++ ++|++.+.+|++|||+..+++.+.+++|..++.+|
T Consensus 335 ~-g~~-------~~~~~~~g~tDa~~~~~~giP~v~-~~Gpg~~~~H~~~E~v~i~~l~~~~~~~~~~l~~~ 397 (402)
T PRK07338 335 L-GLT-------IDWKDSGGVCDGNNLAAAGLPVVD-TLGVRGGNIHSEDEFVILDSLVERAQLSALILMRL 397 (402)
T ss_pred c-CCC-------cccccCCccchHHHHhhcCCCeEe-ccCCCCCCCCCccceEehhhHHHHHHHHHHHHHHH
Confidence 4 431 223346789999999876 89986 44555556899999999999999999999998875
No 14
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.95 E-value=3e-26 Score=210.94 Aligned_cols=206 Identities=16% Similarity=0.167 Sum_probs=167.2
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+.+|..+++|+++|+++|+|. | +.|.||+..+++++..++++..+.. .. ++..+.++++++.
T Consensus 165 ~i~~~~~G~~~~~i~~~G~~~Hss~-p-~~g~nAi~~~~~~l~~l~~~~~~~~-------~~-----~~~~~~~t~~v~~ 230 (377)
T PRK08588 165 GIVYAHKGSMDYKVTSTGKAAHSSM-P-ELGVNAIDPLLEFYNEQKEYFDSIK-------KH-----NPYLGGLTHVVTI 230 (377)
T ss_pred eeEEEEEEEEEEEEEEEeechhccC-C-ccccCHHHHHHHHHHHHHHHhhhhc-------cc-----CccCCCCceeeeE
Confidence 4566789999999999999999997 9 8999999999999999988754310 00 1122367899999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCC--HHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCD--ADLSSQLKSASYA 218 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d--~~l~~~~~~~~~~ 218 (290)
|++ |...|+||++|++.+|+|+.+.++.+++.++|++++++.+...+++++++....++|+.++ +++++.+++++++
T Consensus 231 i~g-G~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 309 (377)
T PRK08588 231 ING-GEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYSNHRPVASDKDSKLVQLAKDVAKS 309 (377)
T ss_pred EeC-CCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEecCCCCcCCCCCCHHHHHHHHHHHH
Confidence 998 8999999999999999999999999999999999999887766777888766667776664 5899999999999
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh---CCeEEEEEecC-CCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVGMLFVRCR-GGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~---~P~~~~f~g~~-~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
++|.+ . ....++|++|+++|... +|++ .+|.+ .+..|++|||+..+++.+.+++|..++.+++
T Consensus 310 ~~g~~---~----~~~~~~g~tD~~~~~~~~~~ip~i--~~Gpg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 310 YVGQD---I----PLSAIPGATDASSFLKKKPDFPVI--IFGPGNNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred hhCCC---C----ceecCCCcccHHHHhhhcCCCCEE--EECCCCCccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 87652 1 22235588999999754 4543 33444 3569999999999999999999999998764
No 15
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=99.95 E-value=7.8e-26 Score=207.28 Aligned_cols=189 Identities=21% Similarity=0.306 Sum_probs=157.9
Q ss_pred eecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecC
Q 022920 66 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWP 145 (290)
Q Consensus 66 ~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g 145 (290)
++|..+++|+++|+++|++. | +.|+||+.++++++.+++++..+. . ++. ...++++|.|++ |
T Consensus 167 ~~g~~~~~i~~~G~~~Has~-p-~~g~nAi~~~~~~i~~l~~~~~~~---------~-----~~~-~~~~~~i~~i~g-G 228 (363)
T TIGR01891 167 MAAADKFEVTIHGKGAHAAR-P-HLGRDALDAAAQLVVALQQIVSRN---------V-----DPS-RPAVVTVGIIEA-G 228 (363)
T ss_pred eeecceEEEEEEeecccccC-c-ccccCHHHHHHHHHHHHHHHhhcc---------C-----CCC-CCcEEEEEEEEc-C
Confidence 67889999999999999976 9 899999999999999999875331 0 112 256899999998 7
Q ss_pred CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccC
Q 022920 146 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTG 225 (290)
Q Consensus 146 ~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~ 225 (290)
.+.|+||++|++.+|+|+.+.+..+++.++|++++++++...+++++++....+|+...|+++++.+++++++++|..
T Consensus 229 ~~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~-- 306 (363)
T TIGR01891 229 GAPNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYDRGLPAVTNDPALTQILKEVARHVVGPE-- 306 (363)
T ss_pred CCCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCccCCHHHHHHHHHHHHHhcCcc--
Confidence 899999999999999999999999999999999999998888899988876667777778899999999999976632
Q ss_pred CCCCccccccCccchHHHHHhhhCCeEEEEEecCC------CCCCCCcCCCCHHHHHH
Q 022920 226 ATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG------GISHSPAEHVLDDDVWA 277 (290)
Q Consensus 226 ~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~------~~~H~~~E~~~~e~~~~ 277 (290)
.+ ...+..++||+|+++|++.+|++++|+|+.+ ..+|+++ |..+|+++.
T Consensus 307 ~~--~~~~~~~~gg~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~-~~~~~~~~~ 361 (363)
T TIGR01891 307 NV--AEDPEVTMGSEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPR-FDIDEEALA 361 (363)
T ss_pred ce--eccCCCCccccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCC-CcCChHHhc
Confidence 11 1111236799999999999999999999874 2488888 889998864
No 16
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.94 E-value=1.5e-25 Score=209.65 Aligned_cols=214 Identities=14% Similarity=0.143 Sum_probs=165.4
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccc-CCCCeEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLES-LSSSLVCTVGE 140 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vg~ 140 (290)
+..+.+|..+++|+++|+++|++. | +.|+||+..+++++.+|++...+... ......+..+ .....++|++.
T Consensus 193 i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~nai~~~~~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~t~~v~~ 265 (427)
T PRK13013 193 ICLGHRGVWWAEVETRGRIAHGSM-P-FLGDSAIRHMGAVLAEIEERLFPLLA-----TRRTAMPVVPEGARQSTLNINS 265 (427)
T ss_pred eEEeeeeEEEEEEEEEccccccCC-C-CcCcCHHHHHHHHHHHHHHHhhhhhh-----cccccCCCCCcccCCCceeeeE
Confidence 455689999999999999999997 9 89999999999999999875422100 0000000000 01256899999
Q ss_pred EEecCCCc----------ceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHh-cCCeEEEEEeecCCcCCCCH--H
Q 022920 141 ISSWPSAS----------NVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK-RSVSCIVERKHDANAVMCDA--D 207 (290)
Q Consensus 141 i~~~g~~~----------NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~-~g~~~e~~~~~~~~~~~~d~--~ 207 (290)
|++ |... |+||++|++.+|+|+.+.++.+++.++|++.++++++. .+++++++....++|+.+++ +
T Consensus 266 i~g-G~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 344 (427)
T PRK13013 266 IHG-GEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRARPGFAYEIRDLFEVLPTMTDRDAP 344 (427)
T ss_pred EeC-CCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEEcccCCcccCCCCCH
Confidence 998 7666 99999999999999999999999999999999988754 35666665544567776654 8
Q ss_pred HHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh--CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 022920 208 LSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAF 285 (290)
Q Consensus 208 l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~ 285 (290)
+++.+.+++++.+|.+ .....++|++|++++.+. +|.++.|+|+..+.+|++|||+..+++.+.+++|..+
T Consensus 345 lv~~l~~a~~~~~g~~-------~~~~~~~g~~D~~~~~~~g~~~~~v~fGPg~~~~aH~~nE~v~i~~l~~~~~~l~~~ 417 (427)
T PRK13013 345 VVRSVAAAIERVLGRQ-------ADYVVSPGTYDQKHIDRIGKLKNCIAYGPGILDLAHQPDEWVGIADMVDSAKVMALV 417 (427)
T ss_pred HHHHHHHHHHHhhCCC-------CceeecCccCCHHHHHhcCCCCCEEEECCCCccccCCCCceeEHHHHHHHHHHHHHH
Confidence 9999999999877652 222345688999999886 4555677776556799999999999999999999999
Q ss_pred HHhcC
Q 022920 286 LETHV 290 (290)
Q Consensus 286 l~~l~ 290 (290)
+.++.
T Consensus 418 l~~~~ 422 (427)
T PRK13013 418 LADLL 422 (427)
T ss_pred HHHHh
Confidence 98763
No 17
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.94 E-value=1.6e-25 Score=209.11 Aligned_cols=212 Identities=16% Similarity=0.128 Sum_probs=162.7
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+++|..+++|+++|+++|+|. | +.|+||+.++++++.+|+++..+.... ...+. ......+.++|++.|
T Consensus 198 i~~~~~G~~~~~i~v~G~~~H~s~-p-~~g~nAi~~~~~~~~~l~~l~~~~~~~-----~~~~~-~~~~~~~~t~~v~~i 269 (422)
T PRK06915 198 FFPKQQGSMWFRLHVKGKAAHGGT-R-YEGVSAIEKSMFVIDHLRKLEEKRNDR-----ITDPL-YKGIPIPIPINIGKI 269 (422)
T ss_pred ceeecccEEEEEEEEEeeccccCC-C-CcCcCHHHHHHHHHHHHHHHHHHhccc-----cCCCc-ccCCCCCceEeEEEe
Confidence 445699999999999999999998 9 899999999999999999876421000 00000 000012458999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhc----CCeEEEEEee-cCC--cCCCCHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR----SVSCIVERKH-DAN--AVMCDADLSSQLKS 214 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~----g~~~e~~~~~-~~~--~~~~d~~l~~~~~~ 214 (290)
++ |...|+||+.|++.+|+|+.+.++.+++.++|++.+++++... +..++++... .++ ++.+|+++++.+++
T Consensus 270 ~g-G~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~ 348 (422)
T PRK06915 270 EG-GSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEH 348 (422)
T ss_pred eC-CCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHH
Confidence 98 8999999999999999999999999999999999998876531 2334444321 122 45667899999999
Q ss_pred HHHHHHhhccCCCCCccccccCccchHHHHHhhh--CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 215 ASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
++++++|.. .....+++++|+++|.+. +|++ .|+++..+.+|++|||+..+++..++++|..++.+++
T Consensus 349 a~~~~~G~~-------~~~~~~~g~tD~~~~~~~~giP~v-~fGpg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~ 418 (422)
T PRK06915 349 NFVEIEGNK-------PIIEASPWGTDGGLLTQIAGVPTI-VFGPGETKVAHYPNEYIEVDKMIAAAKIIALTLLDWC 418 (422)
T ss_pred HHHHHhCCC-------CeeceeeeeccHHHHhccCCCCEE-EECCCCccccCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 999987653 111235688999999886 9985 4555444569999999999999999999999998764
No 18
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.94 E-value=2.7e-25 Score=205.73 Aligned_cols=209 Identities=23% Similarity=0.243 Sum_probs=167.0
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE-
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE- 140 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~- 140 (290)
++.+.+|..+++|+++|+++|++. | +.|.||+.++++++.+|++...+.... | .. .++.....++++|.
T Consensus 177 i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~--~--~~----~~~~~~~~~~~ig~~ 246 (394)
T PRK08651 177 ICIGHRGLVWGVVKVYGKQAHAST-P-WLGINAFEAAAKIAERLKSSLSTIKSK--Y--EY----DDERGAKPTVTLGGP 246 (394)
T ss_pred eEEecccEEEEEEEEEEeccccCC-C-ccccCHHHHHHHHHHHHHHHHHhhhcc--c--cc----cccccCCCceeecce
Confidence 555789999999999999999997 9 899999999999999998754321000 0 00 01122355788998
Q ss_pred -EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCC--HHHHHHHHHHHH
Q 022920 141 -ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCD--ADLSSQLKSASY 217 (290)
Q Consensus 141 -i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d--~~l~~~~~~~~~ 217 (290)
+++ |.+.|+||++|++.+|+|+.+.++.++++++|++++++++...+++++++....+++..++ ..+++.++++++
T Consensus 247 ~i~g-G~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 325 (394)
T PRK08651 247 TVEG-GTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEITPFSEAFVTDPDSELVKALREAIR 325 (394)
T ss_pred eeeC-CCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEecccCCccCCCCCHHHHHHHHHHH
Confidence 887 8999999999999999999999999999999999999998888888887765566776655 479999999999
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+++|.+ ..+..++|++|+++|.+. +|+++ |+++..+.+|++||++..+++....++|..++.+|
T Consensus 326 ~~~g~~-------~~~~~~~g~tD~~~~~~~gip~v~-~Gpg~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~l 390 (394)
T PRK08651 326 EVLGVE-------PKKTISLGGTDARFFGAKGIPTVV-YGPGELELAHAPDEYVEVKDVEKAAKVYEEVLKRL 390 (394)
T ss_pred HHhCCC-------CceeeecCcccHHHHhhCCCcEEE-ECCCChHhcCCCCceeEHHHHHHHHHHHHHHHHHh
Confidence 977652 112235689999999887 89853 44433246999999999999999999999999876
No 19
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.93 E-value=8e-25 Score=203.64 Aligned_cols=201 Identities=15% Similarity=0.135 Sum_probs=157.8
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++..| +.|.||+..+++++..|+++... . ...+++++.|
T Consensus 203 v~~~~~G~~~~~v~v~G~~~Hsg~~p-~~g~nAi~~~~~~i~~l~~~~~~------------------~-~~~t~~~~~i 262 (410)
T PRK06133 203 LTLATSGIATALLEVKGKASHAGAAP-ELGRNALYELAHQLLQLRDLGDP------------------A-KGTTLNWTVA 262 (410)
T ss_pred EEEeccceEEEEEEEEeeccccCCCc-ccCcCHHHHHHHHHHHHHhccCC------------------C-CCeEEEeeEE
Confidence 44568999999999999999986559 89999999999999998876431 1 2467899999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCH---HHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDA---DLSSQLKSASYA 218 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~---~l~~~~~~~~~~ 218 (290)
++ |++.|+||++|++.+|+|+.+.+..+.+.++|++++++ +...+++++++....+|++.+++ .+++.+.++.++
T Consensus 263 ~g-G~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 340 (410)
T PRK06133 263 KA-GTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFERGRPPLEANAASRALAEHAQGIYGE 340 (410)
T ss_pred EC-CCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEeccccCCcccCcchHHHHHHHHHHHHH
Confidence 98 89999999999999999999999999999999999987 44467777777656778877654 455555555544
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
. | ......+..+++++|++++... +|.+.+..|..+..+|++|||+..+++..+..+|..++.+|.
T Consensus 341 ~-~-----~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~~~aH~~nE~i~i~~~~~~~~~~~~~~~~~~ 407 (410)
T PRK06133 341 L-G-----RRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVGFGAHSNDEYIELNSIVPRLYLLTRMIMELS 407 (410)
T ss_pred c-C-----CCccccccCCCCCchHHHHHhcCCCceEecccCCCCCCCCCCcEEEcccHHHHHHHHHHHHHHhh
Confidence 2 2 1111111235689999999876 777654344444569999999999999999999999998763
No 20
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.93 E-value=1.6e-24 Score=198.41 Aligned_cols=193 Identities=18% Similarity=0.176 Sum_probs=158.2
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++..| +.|+||+..+++++.+|+.... ....+++++.+
T Consensus 165 i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nAi~~~~~~i~~l~~~~~--------------------~~~~~~~i~~i 223 (361)
T TIGR01883 165 IQLAAPTQVKVDATIAGKDAHAGLVP-EDGISAISVARMAIHAMRLGRI--------------------DEETTANIGSF 223 (361)
T ss_pred EEecCCceEEEEEEEEeeecCCCCCc-ccCcCHHHHHHHHHHhccccCC--------------------CCcccccccee
Confidence 44568999999999999999986459 8999999999999988864211 11357899999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcC--CCCHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAA 219 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~--~~d~~l~~~~~~~~~~~ 219 (290)
++ |.+.|+||++|++.+|+|+.+.+..+.+.++|++.+++.+...++++++.....++++ ..|+++++.+++++++.
T Consensus 224 ~g-G~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~ 302 (361)
T TIGR01883 224 SG-GVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETRLIYEGFKIHPQHPLMNIFKKAAKKI 302 (361)
T ss_pred ec-CCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEEeccccccCCCCCHHHHHHHHHHHHc
Confidence 98 8999999999999999999999999999999999999988888888887765566665 44678999999998874
Q ss_pred HhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 022920 220 LKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFL 286 (290)
Q Consensus 220 ~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l 286 (290)
|.+ +....++|++|++++.+. +|+++++.|. ..+|++|||+..+++....++|..++
T Consensus 303 -g~~-------~~~~~~~g~tD~~~~~~~giP~v~~G~g~--~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 303 -GLK-------TSEIFSGGGSDANVLNEKGVPTVNLSAGY--VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred -CCC-------cEEEecCcccHHHHHhhCCCceEEECCCc--ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 432 222346689999999866 9998754443 35999999999999999999998876
No 21
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.93 E-value=3e-24 Score=197.50 Aligned_cols=200 Identities=21% Similarity=0.220 Sum_probs=159.7
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++. | +.|.||+..+++++.+|+.+..+. . .+...+.+++++.|
T Consensus 173 i~~g~~g~~~~~i~v~G~~~Ha~~-p-~~g~nAi~~~~~~l~~l~~~~~~~---------~-----~~~~~~~~~~i~~i 236 (375)
T PRK13009 173 IKNGRRGSLTGKLTVKGVQGHVAY-P-HLADNPIHLAAPALAELAATEWDE---------G-----NEFFPPTSLQITNI 236 (375)
T ss_pred EEEecceEEEEEEEEEecCcccCC-C-CcccCHHHHHHHHHHHHHhhhccC---------C-----CccCCCceEEEEEE
Confidence 455788999999999999999997 9 899999999999999998764321 0 01223568899999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCC-CHHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMC-DADLSSQLKSASYAAL 220 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~-d~~l~~~~~~~~~~~~ 220 (290)
++++.+.|+||++|++.+|+|+.+.++.+++.++|++.+++ .++++++++...++|... ++++++.+.+++++.+
T Consensus 237 ~~G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~l~~a~~~~~ 312 (375)
T PRK13009 237 DAGTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWTLSGEPFLTPPGKLVDAVVAAIEAVT 312 (375)
T ss_pred ecCCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHh
Confidence 98444789999999999999999999999999999998874 466777765545555444 3679999999999887
Q ss_pred hhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 221 KRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 221 g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
|.+ .....++|++|++++.+. +|++ .|+|.. ..+|++|||+..+++.+..++|..++.+|+
T Consensus 313 g~~-------~~~~~~~g~tda~~~~~~g~p~v-~~Gp~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 313 GIT-------PELSTSGGTSDARFIADYGAQVV-EFGPVN-ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred CCC-------ceeeccCCCccHHHHHHcCCCeE-EeccCc-ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 653 222235678999999876 5654 566554 458999999999999999999999998875
No 22
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.93 E-value=1.3e-24 Score=198.04 Aligned_cols=189 Identities=13% Similarity=0.180 Sum_probs=153.5
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
+++.+.+|..+++|+++|+++|+|. | + .||+..+++++.++.+.... .. ..++++|.
T Consensus 152 ~i~~~~kG~~~~~i~v~G~~~Has~-p-~--~nAi~~~~~~l~~l~~~~~~------------------~~-~~t~~~~~ 208 (346)
T PRK00466 152 DIVVEYRGSIQLDIMCEGTPEHSSS-A-K--SNLIVDISKKIIEVYKQPEN------------------YD-KPSIVPTI 208 (346)
T ss_pred ceEEEeeEEEEEEEEEEeeccccCC-C-C--cCHHHHHHHHHHHHHhcccc------------------CC-CCcceeeE
Confidence 3666799999999999999999997 8 5 49999999999988764321 22 46789999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCC--CHHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMC--DADLSSQLKSASYA 218 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~--d~~l~~~~~~~~~~ 218 (290)
|++ |+..|+||++|++.+|+|+.+.++.++++++|++++++ ++++ ....++++.. ++++++.+.+++++
T Consensus 209 i~g-G~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~--~~~~~~~~~~~~~~~lv~~l~~a~~~ 279 (346)
T PRK00466 209 IRA-GESYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLK--IVDETPPVKVSINNPVVKALMRALLK 279 (346)
T ss_pred Eec-CCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEe--eccCCCCcccCCCCHHHHHHHHHHHH
Confidence 998 89999999999999999999999999999999988764 3333 2334565554 47899999999987
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
. |.+ .....++|++|+++|.+..|.++.|+|+..+.+|++|||+..+++.+.+++|..++.+|
T Consensus 280 ~-g~~-------~~~~~~~g~tD~~~~~~~~~~~v~fGpg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l 342 (346)
T PRK00466 280 Q-NIK-------PRLVRKAGTSDMNILQKITTSIATYGPGNSMLEHTNQEKITLDEIYIAVKTYMLAIEEL 342 (346)
T ss_pred h-CCC-------ceEEecCCcCcHHHHHHhCCCEEEECCCCcccccCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 4 432 23334668999999988877777787765567999999999999999999999999876
No 23
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.93 E-value=2.2e-24 Score=196.31 Aligned_cols=197 Identities=20% Similarity=0.145 Sum_probs=154.6
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++. | +.|.||+.++++++.+|+++..... .... .+++++.+
T Consensus 148 i~~~~~g~~~~~i~~~G~~~H~s~-p-~~g~nAi~~~a~~i~~l~~~~~~~~--------------~~~~--~~~~~~~i 209 (347)
T PRK08652 148 VAIAHYGNLEAYVEVKGKPSHGAC-P-ESGVNAIEKAFEMLEKLKELLKALG--------------KYFD--PHIGIQEI 209 (347)
T ss_pred eeeecccEEEEEEEEEeeecccCC-C-CcCcCHHHHHHHHHHHHHHHHHhhh--------------cccC--CCCcceee
Confidence 445689999999999999999987 9 8999999999999999988754310 0111 24567778
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHh
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALK 221 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g 221 (290)
++ |...|+||++|++.+|+|+.+.+..+++.++|++++++ .++++++.......+..+|+++++.+.+++++. |
T Consensus 210 ~g-g~~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g 283 (347)
T PRK08652 210 IG-GSPEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEIWDGFELDEDEEIVQLLEKAMKEV-G 283 (347)
T ss_pred ec-CCCCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEeccCCcccCCCCCHHHHHHHHHHHHh-C
Confidence 87 88999999999999999999999999999999998854 456555442211123456788999999999987 5
Q ss_pred hccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 222 RMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 222 ~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
.+ ..+..+++++|+.+|.+. +|++ .|+++..+.+|++|||+..+++.+..++|.+++..+|
T Consensus 284 ~~-------~~~~~~~g~tDa~~~~~~gip~v-~~Gpg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~ 345 (347)
T PRK08652 284 LE-------PEFTVMRSWTDAINFRYNGTKTV-VWGPGELDLCHTKFERIDVREVEKAKEFLKALNEILL 345 (347)
T ss_pred CC-------CCcCcCCccchhHHHHHCCCCEE-EECCCchhhcCCCCceeeHHHHHHHHHHHHHHHHHHh
Confidence 42 111234578999999877 8875 5665544569999999999999999999999998875
No 24
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.93 E-value=4.2e-25 Score=203.26 Aligned_cols=200 Identities=19% Similarity=0.201 Sum_probs=158.2
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+.+|..+++|+++|+++|+|. | +.|.||+..+++++.+|+++...... +.+. ......++++++.
T Consensus 171 ~v~~~~~G~~~~~i~~~G~~~Hs~~-p-~~g~nAi~~~~~~l~~l~~~~~~~~~------~~~~---~~~~~~~t~~i~~ 239 (375)
T TIGR01910 171 NIVIGHKGSIWFKLRVKGKQAHASF-P-QFGVNAIMKLAKLITELNELEEHIYA------RNSY---GFIPGPITFNPGV 239 (375)
T ss_pred ceEEEecceEEEEEEEeeeecccCC-C-CcchhHHHHHHHHHHHHHHHHHHhhh------cccc---cccCCCcccccee
Confidence 3556799999999999999999997 9 89999999999999999987543100 0000 0011257899999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCC---cCCCCHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDAN---AVMCDADLSSQLKSASY 217 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~---~~~~d~~l~~~~~~~~~ 217 (290)
|++ |+..|+||++|++.+|+|+.+.++.+.+.++|++++++.+...++++++.....++ ....|+++++.+.++++
T Consensus 240 i~g-G~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (375)
T TIGR01910 240 IKG-GDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALEAIIK 318 (375)
T ss_pred EEC-CCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHHHHHH
Confidence 998 89999999999999999999999999999999999998877677777765433333 45567889999999999
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHH
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGL 280 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~ 280 (290)
+.+|.+ . ....++|++|++++.+. +|++. |+++..+.+|++|||+.++++.+.++
T Consensus 319 ~~~g~~---~----~~~~~~g~tD~~~~~~~gip~v~-~Gpg~~~~~H~~~E~v~~~~~~~~~~ 374 (375)
T TIGR01910 319 KVRGIE---P----EVLVSTGGTDARFLRKAGIPSIV-YGPGDLETAHQVNEYISIKNLVESTK 374 (375)
T ss_pred HHhCCC---C----eEeeeccchhHHHHHHcCCcEEE-ECCCCccccCCCCceeEHHHHHHHhh
Confidence 987653 1 22235689999999877 99864 54443456999999999999988765
No 25
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=99.92 E-value=1.2e-23 Score=193.27 Aligned_cols=199 Identities=20% Similarity=0.225 Sum_probs=157.0
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++. | +.++||+..+++++..|+....+. . .+...+.+++++.|
T Consensus 170 i~~~~~G~~~~~v~v~G~~~H~~~-p-~~g~nAi~~~~~~i~~l~~~~~~~---------~-----~~~~~~~t~~i~~i 233 (370)
T TIGR01246 170 IKNGRRGSITGNLTIKGIQGHVAY-P-HLANNPIHKAAPALAELTAIKWDE---------G-----NEFFPPTSLQITNI 233 (370)
T ss_pred EEEeeeEEEEEEEEEEccCcccCC-c-ccCCCHHHHHHHHHHHHhhhhhcc---------C-----CccCCCCceEeeee
Confidence 455689999999999999999997 9 899999999999999988653210 0 01123568999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCc-CCCCHHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASYAAL 220 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~-~~~d~~l~~~~~~~~~~~~ 220 (290)
+++....|+||++|++.+|+|+.+.++.+++.++|+++++. .++++++++...++| ..+|+++++.+.+++++.+
T Consensus 234 ~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~~~~p~~~~~~~~~~~~~~a~~~~~ 309 (370)
T TIGR01246 234 HAGTGANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSLSGEPFLTNDGKLIDKAREAIEETN 309 (370)
T ss_pred ecCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEecCCcceeCCCCHHHHHHHHHHHHHh
Confidence 98334789999999999999999999999999999988764 466777665444444 3447789999999999887
Q ss_pred hhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 221 KRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 221 g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
|.+ .....++|++|++++... +|++ .|+++.. .+|++|||+..+++.+..++|..++.+|
T Consensus 310 g~~-------~~~~~~~g~~d~~~~~~~g~p~~-~~Gp~~~-~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 310 GIK-------PELSTGGGTSDGRFIALMGAEVV-EFGPVNA-TIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCC-------CceecCCCCchHHHHHHcCCCEE-EecCCcc-cCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 642 222345688999999876 6754 5665543 4899999999999999999999999775
No 26
>PRK07473 carboxypeptidase; Provisional
Probab=99.92 E-value=1.8e-23 Score=192.36 Aligned_cols=194 Identities=18% Similarity=0.141 Sum_probs=151.5
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
+++.+++|..+++|+++|+++|++..| +.|+||+..+++++.+|+++... ..++|+|.
T Consensus 178 ~v~~~~~G~~~~~v~~~G~~aHag~~p-~~g~nAi~~~~~~i~~l~~~~~~---------------------~~~~~vg~ 235 (376)
T PRK07473 178 GVVTGRYAIARFNLEATGRPSHAGATL-SEGRSAIREMARQILAIDAMTTE---------------------DCTFSVGI 235 (376)
T ss_pred CEEEECeeeEEEEEEEEeEcCCCCCCc-ccCcCHHHHHHHHHHHHHHhcCC---------------------CceEeEee
Confidence 466789999999999999999997669 79999999999999999886421 35789999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCC---HHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCD---ADLSSQLKSASY 217 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d---~~l~~~~~~~~~ 217 (290)
|++ |.+.|+||++|++.+++|..+.+..+++.+++.+.++ ...++++++......|+...+ +.+++.++++.+
T Consensus 236 i~g-g~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (376)
T PRK07473 236 VHG-GQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTRGVTRPVWEPDAGTMALYEKARAIAG 311 (376)
T ss_pred EEc-CCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEccccCCCCCCChhHHHHHHHHHHHHH
Confidence 998 8899999999999999999888888877777766654 235666666543345655443 357777777665
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+ .|. ..+...++|++|+++++.. +|++..|+|.+ ..+|+++||+..+++.+.+++|..++.+|
T Consensus 312 ~-~g~-------~~~~~~~~g~tDa~~~~~~giP~v~g~Gpg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 312 Q-LGL-------SLPHGSAGGGSDGNFTGAMGIPTLDGLGVRG-ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred H-cCC-------CCccccCccccHhhhHHhcCCCEEEeccCCC-CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 5 332 1233346789999999876 89876455443 45899999999999999999999998765
No 27
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-23 Score=194.28 Aligned_cols=204 Identities=21% Similarity=0.175 Sum_probs=159.7
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHH-HhcCCCCccccCCCCCCcccccC-C-CCeEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER-LCKHPKDFLSYDGRSNCSTLESL-S-SSLVCTV 138 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~v 138 (290)
++.+.+|..+++|+++|+++|+|. | +.|+||+..+++++..+++ +... +. .. ++. . ...++++
T Consensus 189 i~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~-~~------~~-----~~~~~~~~~~~~~ 254 (400)
T PRK13983 189 IEIAEKSILWLKFTVKGKQCHAST-P-ENGINAHRAAADFALELDEALHEK-FN------AK-----DPLFDPPYSTFEP 254 (400)
T ss_pred eEEeecceEEEEEEEEeEccccCC-C-CCCCCHHHHHHHHHHHHHHHHHhh-hc------cc-----ccccCCCCccccc
Confidence 345689999999999999999998 9 8999999999999999987 4322 10 00 011 0 1235677
Q ss_pred EEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEee-cCC--cCCCCHHHHHHHHHH
Q 022920 139 GEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH-DAN--AVMCDADLSSQLKSA 215 (290)
Q Consensus 139 g~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~-~~~--~~~~d~~l~~~~~~~ 215 (290)
+.+.+++.+.|+||++|++.+|+|+.+.++.+.++++|++++++.+...+.++++.... .++ ++..|+++++.+.++
T Consensus 255 ~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~l~~a 334 (400)
T PRK13983 255 TKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQREQAPPPTPPDSEIVKKLKRA 334 (400)
T ss_pred ceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeeccCCccCCCCCcHHHHHHHHH
Confidence 88877346899999999999999999999999999999999998877777777776543 333 455678899999999
Q ss_pred HHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHh
Q 022920 216 SYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLET 288 (290)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~ 288 (290)
+++.+|.+ .....++|++|+.++... +|++.+ |.+...+|++|||+..+++.+..++|..++.+
T Consensus 335 ~~~~~g~~-------~~~~~~~g~td~~~~~~~gip~v~~--Gp~~~~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 335 IKEVRGIE-------PKVGGIGGGTVAAFLRKKGYPAVVW--STLDETAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred HHHhcCCC-------ceeeeecCcHHHHHHHHcCCCEEEe--CCccccCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 99987653 122235688999999765 898754 44445699999999999999999999998864
No 28
>PRK13381 peptidase T; Provisional
Probab=99.91 E-value=8.9e-23 Score=189.64 Aligned_cols=196 Identities=15% Similarity=0.059 Sum_probs=153.8
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
+++.+.+|..+++|+++|+++|++..| +.|.||+.++++++.+|+++..+. . .+. ...+++++.
T Consensus 201 ~i~~~~~G~~~~~v~v~Gk~aHa~~~p-~~g~NAI~~a~~~i~~l~~~~~~~---------~-----~~~-~~~~i~v~~ 264 (404)
T PRK13381 201 EVVYENFNAASAEITITGVTAHPMSAK-GVLVNPILMANDFISHFPRQETPE---------H-----TEG-REGYIWVND 264 (404)
T ss_pred eEEEecCcceEEEEEEEeEecCCCCCc-ccCcCHHHHHHHHHHhCCccCCCC---------C-----CCC-cccEEEEEe
Confidence 455678999999999999999987558 899999999999999987764321 0 011 134577887
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcC-CeEEEEEeecC--C--cCCCCHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS-VSCIVERKHDA--N--AVMCDADLSSQLKSA 215 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g-~~~e~~~~~~~--~--~~~~d~~l~~~~~~~ 215 (290)
+++ + |++|++.+|+|+.+.+..+++.++|+++++++++..+ +++++++...+ + .+.+|+++++.++++
T Consensus 265 i~g-~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a 337 (404)
T PRK13381 265 LQG-N------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDA 337 (404)
T ss_pred EEe-C------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHH
Confidence 775 2 8999999999999999999999999999999988777 66666543222 2 356688999999999
Q ss_pred HHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 216 SYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+++. |.+ .....+.+++|+++|.+. +|+++++.|. ..+|++|||+..+++.+.+++|..++..+
T Consensus 338 ~~~~-g~~-------~~~~~~~g~tDa~~~~~~giP~v~~GpG~--~~aH~~dE~v~i~~l~~~~~v~~~~~~~~ 402 (404)
T PRK13381 338 MKEL-GIE-------PKVIPMRGGTDGAALSAKGLPTPNLFTGA--HNFHSRFEFLPVSSFVKSYEVTITICLLA 402 (404)
T ss_pred HHHc-CCC-------eeeccCCccchHHHHhcCCCCeEEECccc--cCCcCcceeEEHHHHHHHHHHHHHHHHHh
Confidence 8864 431 222235689999999866 9998765553 34899999999999999999999998876
No 29
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.91 E-value=3.2e-23 Score=192.86 Aligned_cols=227 Identities=30% Similarity=0.311 Sum_probs=165.4
Q ss_pred ceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcccc
Q 022920 39 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSY 118 (290)
Q Consensus 39 ~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~ 118 (290)
.....++|++| .+...+.+..+ .+.+|..+++|+++|+++|+|.+|++.+.|++..+.+.+.++.....+..
T Consensus 170 ~~~d~~i~~E~--~~~~~~~~~~~-~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~----- 241 (409)
T COG0624 170 IRPDYEIVGEP--TLESEGGDIIV-VGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLA----- 241 (409)
T ss_pred cCCCEEEeCCC--CCcccCCCeEE-EcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccc-----
Confidence 34555699988 22222333433 38999999999999999999986348999955555555554443322210
Q ss_pred CCCCCCcccccCCC-CeEEEEEEEEecC-------CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCe
Q 022920 119 DGRSNCSTLESLSS-SLVCTVGEISSWP-------SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS 190 (290)
Q Consensus 119 ~~~~~~~~~~~~~~-~~~~~vg~i~~~g-------~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~ 190 (290)
.+... +.+++++.+.++. ...|+||++|++.+|+|..+....+++.+++++.++..+...+++
T Consensus 242 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~ 312 (409)
T COG0624 242 ---------GEGFDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVE 312 (409)
T ss_pred ---------cccccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCce
Confidence 01111 3566777666522 235999999999999999999999999999999998876555666
Q ss_pred EEEEE--eecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhC-CeEEEEEecCCCCCCCCc
Q 022920 191 CIVER--KHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLT-KVGMLFVRCRGGISHSPA 267 (290)
Q Consensus 191 ~e~~~--~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~-P~~~~f~g~~~~~~H~~~ 267 (290)
+++.. .....++..+.++++.+.+++++.+|.+ ...+.+++++|+.+++... | ++.|+++..+.+|++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~-------~~~~~~G~~~da~~~~~~~~~-~~~fgp~~~~~~H~~~ 384 (409)
T COG0624 313 YEIEPGLGEPPLPVPGDSPLVAALAEAAEELLGLP-------PEVSTGGGTHDARFFARLGIP-AVIFGPGDIGLAHQPN 384 (409)
T ss_pred EEeccccCCccccCCCchHHHHHHHHHHHHhhCCC-------ceecCCCCcchHHHHHhcCCe-eEEECCCCcccccCCC
Confidence 66663 2223356667899999999999976542 2333455669999998884 7 7888887767899999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcC
Q 022920 268 EHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 268 E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
||+..+++.+.+++|.+++.+|.
T Consensus 385 E~v~i~~l~~~~~~~~~~l~~l~ 407 (409)
T COG0624 385 EYVELEDLVKGAKVLARLLYELA 407 (409)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998763
No 30
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.91 E-value=3e-23 Score=191.53 Aligned_cols=205 Identities=17% Similarity=0.173 Sum_probs=156.5
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCC-CCeEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLS-SSLVCTVG 139 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vg 139 (290)
.++.+.+|..+++|+++|+++|+|. | +.++||+..+++++.+|+++..+.... .... .... ..++++++
T Consensus 169 ~~~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~----~~~~----~~~~~~~~t~~i~ 238 (385)
T PRK07522 169 RPVVGHKGKAAYRCTVRGRAAHSSL-A-PQGVNAIEYAARLIAHLRDLADRLAAP----GPFD----ALFDPPYSTLQTG 238 (385)
T ss_pred eeeeeecceEEEEEEEEeeccccCC-C-ccCcCHHHHHHHHHHHHHHHHHHHhhc----CCCC----cCCCCCcceeEEe
Confidence 3556789999999999999999997 8 799999999999999999875331000 0000 0011 13688999
Q ss_pred EEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHH------HHHhcCCeEEEEEeecCCcCCCC--HHHHHH
Q 022920 140 EISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ------ICEKRSVSCIVERKHDANAVMCD--ADLSSQ 211 (290)
Q Consensus 140 ~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~------~a~~~g~~~e~~~~~~~~~~~~d--~~l~~~ 211 (290)
.|++ |.+.|+||++|++.+|+|+.+.++.+.+.++|++.+++ .+...+++++++....+|++.++ +++++.
T Consensus 239 ~i~g-G~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~ 317 (385)
T PRK07522 239 TIQG-GTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEPLSAYPGLDTAEDAAAARL 317 (385)
T ss_pred eeec-CccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEeccCCCCCCCCCCcHHHHH
Confidence 9998 89999999999999999999999999999999999987 24556788877765677888775 567777
Q ss_pred HHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 212 LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 212 ~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+++++ ++. . ... ..+++|+++|... +|++. |++...+.+|++|||+..+++.+.+.+|..++.+|
T Consensus 318 ~~~~~----~~~----~--~~~--~~~~td~~~~~~~gip~v~-~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~~~~~ 383 (385)
T PRK07522 318 VRALT----GDN----D--LRK--VAYGTEAGLFQRAGIPTVV-CGPGSIEQAHKPDEFVELAQLAACEAFLRRLLASL 383 (385)
T ss_pred HHHHh----CCC----C--cce--EeeecchHHhccCCCCEEE-ECCCChhhCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 66543 221 1 111 3368999999865 88753 44333346999999999999999999999998876
No 31
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=99.90 E-value=1.1e-22 Score=188.56 Aligned_cols=205 Identities=16% Similarity=0.104 Sum_probs=153.5
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+.+|..+++|+++|+++|+|. | +.|.||+..+++++..|+++.... .. ++..+..++++|.
T Consensus 173 ~i~~g~~G~~~~~v~~~G~~~Hss~-p-~~g~nAi~~~~~~l~~l~~~~~~~--------~~-----~~~~~~~t~~v~~ 237 (395)
T TIGR03320 173 NIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMAPILKELSQLNANL--------VE-----DPFLGKGTLTVSE 237 (395)
T ss_pred ceEEecceEEEEEEEEeeeccccCC-C-CCCCCHHHHHHHHHHHHHHHHHhh--------cC-----CcccCcCceeeee
Confidence 3556789999999999999999997 9 899999999999999999875431 00 1222356889999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe-------------ecCCcC--CCC
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------HDANAV--MCD 205 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-------------~~~~~~--~~d 205 (290)
|++++.+.|+||++|++.+|+|+.+.++.+++.++|++.+... ..++++++... ..+|++ ..|
T Consensus 238 i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (395)
T TIGR03320 238 IFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPED 315 (395)
T ss_pred eecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc--CCCceEeeeccCcccccccccccccccCccccCCC
Confidence 9984458999999999999999999999999999999886532 12233433211 124443 345
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCccccccCccchHH-HHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHH
Q 022920 206 ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVL 283 (290)
Q Consensus 206 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~-~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~ 283 (290)
.++++.+.+++++++|.++ . .. ...+++|. .++++. +|++ .|+|.....+|++|||+.++++.+.+++|.
T Consensus 316 ~~~v~~l~~~~~~~~g~~~--~---~~--~~~~~~~~~~~~~~~g~p~v-~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~ 387 (395)
T TIGR03320 316 HLITKAALETYKRLFGKEP--G---VD--KWTFSTNGVSIMGRHGIPVI-GFGPGDEDQAHAPNEKTWKEDLVRAAAMYA 387 (395)
T ss_pred CHHHHHHHHHHHHHhCCCC--c---ee--ecceecccceehhhcCCCEE-EECCCchhhccCCCcEEEHHHHHHHHHHHH
Confidence 7899999999999887631 1 11 12355676 455554 8876 465543356899999999999999999999
Q ss_pred HHHHhcC
Q 022920 284 AFLETHV 290 (290)
Q Consensus 284 ~~l~~l~ 290 (290)
+++.+++
T Consensus 388 ~~~~~~~ 394 (395)
T TIGR03320 388 AIPTVYL 394 (395)
T ss_pred HHHHHhh
Confidence 9998763
No 32
>PRK05469 peptidase T; Provisional
Probab=99.90 E-value=2.3e-22 Score=187.03 Aligned_cols=192 Identities=15% Similarity=0.074 Sum_probs=151.8
Q ss_pred eeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEec
Q 022920 65 GIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSW 144 (290)
Q Consensus 65 ~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~ 144 (290)
+.+|..+|+|+++|+++|++..| +.|.||+.++++++..|+++.... . +.....++++|.+++
T Consensus 207 ~~~g~~~~~i~v~Gk~~Ha~~~p-~~g~nAi~~~~~~i~~l~~~~~~~---------~------~~~~~~~i~~g~i~g- 269 (408)
T PRK05469 207 ENFNAASAKITIHGVNVHPGTAK-GKMVNALLLAADFHAMLPADETPE---------T------TEGYEGFYHLTSIKG- 269 (408)
T ss_pred ccCceeEEEEEEeeecCCCCCCc-ccccCHHHHHHHHHHhCCCCCCCC---------C------CCCceEEEEEEEEEE-
Confidence 46788999999999999987668 899999999999999877653221 0 011134567887776
Q ss_pred CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhc-CCeEEEEEeecCC----cCCCCHHHHHHHHHHHHHH
Q 022920 145 PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR-SVSCIVERKHDAN----AVMCDADLSSQLKSASYAA 219 (290)
Q Consensus 145 g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~-g~~~e~~~~~~~~----~~~~d~~l~~~~~~~~~~~ 219 (290)
| |++|++.+|+|+.+.+..+.+.++|++++++++..+ ++++++++...++ ++.+|+++++.+++++++.
T Consensus 270 g------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~ 343 (408)
T PRK05469 270 T------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL 343 (408)
T ss_pred c------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc
Confidence 3 799999999999999999999999999999998877 5777776543332 4678899999999999874
Q ss_pred HhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 220 LKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 220 ~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
|.. ....+++|++|+++|... +|+++++.|. ..+|+++||+.++++...+++|..++..+
T Consensus 344 -g~~-------~~~~~~~ggtD~~~~~~~giP~v~~gpG~--~~~H~~~E~v~i~~l~~~~~~~~~~~~~~ 404 (408)
T PRK05469 344 -GIE-------PIIKPIRGGTDGSQLSFMGLPCPNIFTGG--HNFHGKFEFVSLESMEKAVEVIVEIAELT 404 (408)
T ss_pred -CCC-------cEEecCCCcccHHHHhhCCCceEEECcCc--ccCcCcceeeEHHHHHHHHHHHHHHHHHH
Confidence 431 222235689999999865 9998766543 34899999999999999999999988765
No 33
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=99.90 E-value=1.5e-22 Score=187.64 Aligned_cols=205 Identities=16% Similarity=0.110 Sum_probs=153.6
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+.+|..+++|+++|+++|++. | +.|+||+.++++++.+|+++.... .. ++..+..+++++.
T Consensus 173 ~i~~g~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~--------~~-----~~~~~~~~~~v~~ 237 (395)
T TIGR03526 173 NIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMAPILKELSQLNANL--------VE-----DPFLGKGTLTVSE 237 (395)
T ss_pred eEEEEcceEEEEEEEEecCCCccCC-C-CCCCCHHHHHHHHHHHHHHhhhhh--------cC-----CcccCccceeeee
Confidence 3556789999999999999999997 9 899999999999999999875431 00 1222356899999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe-------------ecCCcC--CCC
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------HDANAV--MCD 205 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-------------~~~~~~--~~d 205 (290)
|++++.+.|+||++|++.+|+|+.+.++.+++.++|+++++.. ..++++++... ..+|++ ..|
T Consensus 238 i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (395)
T TIGR03526 238 IFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPED 315 (395)
T ss_pred eecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCcceEEEeccccccccccccccccccCccccCCC
Confidence 9974458999999999999999999999999999999987542 12333433211 023443 346
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHH-HHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHH
Q 022920 206 ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAM-AMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVL 283 (290)
Q Consensus 206 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~-~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~ 283 (290)
.++++.+.+++++.+|..+ ... ...+++|.. ++++. +|++ .|++.....+|++|||+.++++...+++|.
T Consensus 316 ~~~~~~l~~~~~~~~g~~~-----~~~--~~~~~~~~~~~~~~~g~p~v-~~Gpg~~~~aH~~dE~i~i~~l~~~~~~~~ 387 (395)
T TIGR03526 316 HLITKAALETYKRLFGKEP-----GVD--KWTFSTNGVSIMGRHGIPVI-GFGPGDEDQAHAPNEKTWKEDLVKAAAMYA 387 (395)
T ss_pred CHHHHHHHHHHHHHhCCCC-----cee--eeeeecccceehhhcCCCEE-EECCcchhhccCCCceEEHHHHHHHHHHHH
Confidence 7899999999999877531 111 123556664 44554 8876 555543346899999999999999999999
Q ss_pred HHHHhcC
Q 022920 284 AFLETHV 290 (290)
Q Consensus 284 ~~l~~l~ 290 (290)
+++..|+
T Consensus 388 ~~~~~~~ 394 (395)
T TIGR03526 388 AIPTVYL 394 (395)
T ss_pred HHHHHhc
Confidence 9998774
No 34
>PRK08262 hypothetical protein; Provisional
Probab=99.90 E-value=1.2e-22 Score=192.98 Aligned_cols=212 Identities=16% Similarity=0.117 Sum_probs=155.4
Q ss_pred EeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CC--------ccc----cCC-----CC---
Q 022920 64 QGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP-KD--------FLS----YDG-----RS--- 122 (290)
Q Consensus 64 ~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~-~~--------~~~----~~~-----~~--- 122 (290)
.+.+|..+++|+++|+++|+|. | +. .||+..+++++.+|++...+. +. .+. ++. ..
T Consensus 236 ~~~kG~~~~~i~v~G~~~Hss~-p-~~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (486)
T PRK08262 236 VAEKGYATLELTARATGGHSSM-P-PR-QTAIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLF 312 (486)
T ss_pred EeeeeeEEEEEEEecCCCCCCC-C-CC-CCHHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccch
Confidence 4579999999999999999998 8 77 999999999999998742110 00 000 000 00
Q ss_pred CC--------cccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Q 022920 123 NC--------STLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 194 (290)
Q Consensus 123 ~~--------~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~ 194 (290)
.+ .........++++++.|++ |...|+||++|++.+|+|+.+.++.+++.++|++.+++. ++++++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~t~~i~~I~g-G~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~v~~~ 387 (486)
T PRK08262 313 EPLLLRVLAKSPETAAMLRTTTAPTMLKG-SPKDNVLPQRATATVNFRILPGDSVESVLAHVRRAVADD----RVEIEVL 387 (486)
T ss_pred hhHHHHHHhcCCccceeEEeeeeeeEEec-CCccccCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC----ceEEEEe
Confidence 00 0000001256899999998 889999999999999999999999999999999988753 5555554
Q ss_pred EeecCC--cCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecC-----CCCCCCCc
Q 022920 195 RKHDAN--AVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCR-----GGISHSPA 267 (290)
Q Consensus 195 ~~~~~~--~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~-----~~~~H~~~ 267 (290)
.....| +..+|+++++.+++++++.+|+. . ..+..+++++|+++|...+|+++.|.+.. .+.+|++|
T Consensus 388 ~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~----~--~~~~~~~g~tDa~~~~~~~p~~~~~~~~~~gpg~~~~~Ht~d 461 (486)
T PRK08262 388 GGNSEPSPVSSTDSAAYKLLAATIREVFPDV----V--VAPYLVVGATDSRHYSGISDNVYRFSPLRLSPEDLARFHGTN 461 (486)
T ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC----c--cccceecccccHHHHHHhcCCeEEECCccCCcccccCCCCCC
Confidence 322233 35567889999999999887531 1 12223568999999988888877665442 13589999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q 022920 268 EHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 268 E~~~~e~~~~~~~~~~~~l~~l 289 (290)
||+..+++..+.++|..++.++
T Consensus 462 E~i~i~~l~~~~~i~~~~l~~~ 483 (486)
T PRK08262 462 ERISVANYARMIRFYYRLIENA 483 (486)
T ss_pred CceeHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998765
No 35
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.90 E-value=1.1e-22 Score=187.68 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=154.3
Q ss_pred EEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccC--CCCeEEEEEE
Q 022920 63 VQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESL--SSSLVCTVGE 140 (290)
Q Consensus 63 v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vg~ 140 (290)
+.+.+|..+++|+++|+++|++. | +.|.||+..+++++.+++.+...... +.. ++. ...++++++.
T Consensus 175 ~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~nai~~~~~~i~~l~~~~~~~~~------~~~----~~~~~~~~~t~~i~~ 242 (383)
T PRK05111 175 VRAHKGHMSEAIRITGQSGHSSD-P-ALGVNAIELMHDVIGELLQLRDELQE------RYH----NPAFTVPYPTLNLGH 242 (383)
T ss_pred eecccceEEEEEEEEeechhccC-C-ccCcCHHHHHHHHHHHHHHHHHHHhc------cCC----CccCCCCCCceeEee
Confidence 45689999999999999999997 9 89999999999999999876432100 000 011 1256899999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe-ecCCcCC--CCHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-HDANAVM--CDADLSSQLKSASY 217 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-~~~~~~~--~d~~l~~~~~~~~~ 217 (290)
|++ |...|+||++|++.+|+|+.+.++.+++.++|++.+++++..+++++++... ...|++. .++++++.+++++
T Consensus 243 i~g-g~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 320 (383)
T PRK05111 243 IHG-GDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPLHPPIPGYECPADHQLVRVVEKLL- 320 (383)
T ss_pred eec-CCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeccccCCCCcCCCCCCHHHHHHHHHh-
Confidence 998 8999999999999999999999999999999999999988888888877643 2455543 3456776665433
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
|.+ ... ..+++|+.++.+. +|+++++.|. ...+|++|||+..+++.+++++|..++.++
T Consensus 321 ---g~~-------~~~--~~~~~Da~~~~~~g~p~v~~G~g~-~~~~H~~~E~v~~~~l~~~~~i~~~~~~~~ 380 (383)
T PRK05111 321 ---GHK-------AEV--VNYCTEAPFIQQLGCPTLVLGPGS-IEQAHQPDEYLELSFIKPTRELLRQLIHHF 380 (383)
T ss_pred ---CCC-------Cce--eeeeccHHHHHhcCCCEEEECCCc-hHhCcCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 321 122 2367999998776 8887644332 235899999999999999999999998876
No 36
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.90 E-value=1.3e-22 Score=185.85 Aligned_cols=197 Identities=21% Similarity=0.249 Sum_probs=149.9
Q ss_pred EEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCC-CCeEEEEEEE
Q 022920 63 VQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLS-SSLVCTVGEI 141 (290)
Q Consensus 63 v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vg~i 141 (290)
+.+.+|..+++|+++|+++|++. | +.|.||+..+++++.+|+++....... ... .+.. ..++++++.|
T Consensus 162 ~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~-----~~~----~~~~~~~~~~~i~~i 230 (364)
T TIGR01892 162 VRAHKGYASAEVTVRGRSGHSSY-P-DSGVNAIFRAGRFLQRLVHLADTLLRE-----DLD----EGFTPPYTTLNIGVI 230 (364)
T ss_pred EEeeceEEEEEEEEEcccccccC-C-ccCcCHHHHHHHHHHHHHHHHHHhccC-----CCC----ccCCCCCceEEEeee
Confidence 34678999999999999999997 9 899999999999999998875321000 000 0111 1468999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHH-hcCCeEEEEEeecCCcCCC--CHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE-KRSVSCIVERKHDANAVMC--DADLSSQLKSASYA 218 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~-~~g~~~e~~~~~~~~~~~~--d~~l~~~~~~~~~~ 218 (290)
++ |...|+||++|++.+|+|+.+.++.+++.++|++++++.+. ..+++++++....+|++.. |.++++.++++
T Consensus 231 ~g-g~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~--- 306 (364)
T TIGR01892 231 QG-GKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVSTDPGVNTEPDAELVAFLEEL--- 306 (364)
T ss_pred ec-CCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEccCCCCcCCCCCCHHHHHHHHH---
Confidence 98 89999999999999999999999999999999999988753 4677777766556676554 45677666543
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAF 285 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~ 285 (290)
++.+ ... ..+++|+.+|.+. +|++ .|++...+..|++|||+.++++.+.+++|..+
T Consensus 307 -~~~~-------~~~--~~~~tD~~~~~~~gip~v-~~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 307 -SGNA-------PEV--VSYGTEAPQFQELGAEAV-VCGPGDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred -hCCC-------Cce--ecccccHHHHHhCCCcEE-EECCCChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 3321 111 2357999999876 8975 45444334689999999999999999988765
No 37
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.90 E-value=2.6e-22 Score=187.71 Aligned_cols=212 Identities=16% Similarity=0.104 Sum_probs=158.8
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|+|. | +.|.||+..+++++..|+.+....... ....+. ......+.+++++.|
T Consensus 202 i~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~----~~~~~~-~~~~~~~~t~ni~~i 274 (427)
T PRK06837 202 LVRAQVGVIWFRLRVRGAPVHVRE-A-GTGANAIDAAYHLIQALRELEAEWNAR----KASDPH-FEDVPHPINFNVGII 274 (427)
T ss_pred cccccceeEEEEEEEEeeccccCC-c-ccCcCHHHHHHHHHHHHHHHHHHHhhc----ccCCCc-ccCCCCceeEeeeeE
Confidence 445789999999999999999997 9 899999999999999998775321000 000000 000112568899999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhc----CCeEEEEEee-cCCcCCC--CHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR----SVSCIVERKH-DANAVMC--DADLSSQLKS 214 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~----g~~~e~~~~~-~~~~~~~--d~~l~~~~~~ 214 (290)
++ |...|+||++|++.+++|+.+.++.+++.++|++++++.+... +..+++++.. ..+|+.. |.++++.+++
T Consensus 275 ~g-G~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 353 (427)
T PRK06837 275 KG-GDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSGFLAEGYVLEPGSEAEAALAR 353 (427)
T ss_pred eC-CCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEecccCCcCCCCCCHHHHHHHH
Confidence 98 8899999999999999999999999999999999998765432 2233444322 3455554 4579999999
Q ss_pred HHHHHHhhccCCCCCccccccCccchHHHHHhh--hCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 215 ASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH--LTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~--~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
++++.+|.+ . ....++|++|++++.. -+|++ .|++. ...+|++|||+..+++.+.+++|..++.+++
T Consensus 354 a~~~~~g~~---~----~~~~~~g~tDa~~~~~~~gip~v-~~Gp~-~~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~ 422 (427)
T PRK06837 354 AHAAVFGGP---L----RSFVTTAYTDTRFYGLYYGIPAL-CYGPS-GEGIHGFDERVDLESVRKVTKTIALFVAEWC 422 (427)
T ss_pred HHHHHhCCC---C----eeeEEeeccchHHHhccCCCCEE-EECCC-CCccCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 999887642 1 2223568999999974 38976 45554 4459999999999999999999999987763
No 38
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.89 E-value=5.2e-22 Score=184.25 Aligned_cols=207 Identities=13% Similarity=0.070 Sum_probs=153.5
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++. | . ..||+..+++++..|+++.......+. ..+. .. ....++++++.|
T Consensus 185 i~~~~kG~~~~~l~v~G~~~Hs~~-~-~-~~nai~~l~~~i~~l~~~~~~~~~~~~---~~~~--~~-~~~~~t~~v~~i 255 (400)
T TIGR01880 185 VFYAERVPWWVVVTAPGNPGHGSK-L-M-ENTAMEKLEKSVESIRRFRESQFQLLQ---SNPD--LA-IGDVTSVNLTKL 255 (400)
T ss_pred eeEEeeEEEEEEEEEecCCCCCCC-C-C-CCCHHHHHHHHHHHHHHhhHHHHHHHh---cCcc--cc-ccccceeeccee
Confidence 445699999999999999999997 6 3 479999999999988765321000000 0000 00 112478999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCC-cC--CCCHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDAN-AV--MCDADLSSQLKSASYA 218 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~-~~--~~d~~l~~~~~~~~~~ 218 (290)
++ |...|+||++|++.+|+|+.+.++.+++.++|++++++. ..++++++......+ +. ..+.++++.+++++++
T Consensus 256 ~g-G~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~ 332 (400)
T TIGR01880 256 KG-GVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHSGKPLVTPHDDSNPWWVAFKDAVKE 332 (400)
T ss_pred cc-CCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 98 889999999999999999999999999999999998863 245556554332232 22 2356899999999988
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCC--CCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRG--GISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~--~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
. +. . ..+..+.|++|+.++.+. +|++ .|+|... ..+|++|||+..+++.+++++|..++.+|
T Consensus 333 ~-~~-----~--~~~~~~~g~tDa~~~~~~gip~v-~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~~~~~l~~~ 397 (400)
T TIGR01880 333 M-GC-----T--FKPEILPGSTDSRYIRAAGVPAL-GFSPMNNTPVLLHDHNEFLNEAVFLRGIEIYQTLISAL 397 (400)
T ss_pred c-CC-----e--ecceeecCcchHHHHHhCCCCeE-EECCccCCcccccCCCCceEHHHHHHHHHHHHHHHHHh
Confidence 5 32 1 122346689999999876 8984 5666543 25899999999999999999999999876
No 39
>PRK09133 hypothetical protein; Provisional
Probab=99.89 E-value=4.5e-22 Score=188.43 Aligned_cols=214 Identities=14% Similarity=0.137 Sum_probs=153.3
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-Cccc---cC------C--------C--
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPK-DFLS---YD------G--------R-- 121 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~-~~~~---~~------~--------~-- 121 (290)
++.+.+|..+++|+++|+++|+|. | + +.||+..+++++..|+++..+.. ..+. |+ . .
T Consensus 219 i~~g~kG~~~~~i~v~G~~~Hss~-p-~-~~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (472)
T PRK09133 219 VQAGEKTYADFRLEVTNPGGHSSR-P-T-KDNAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFA 295 (472)
T ss_pred eeeecceeEEEEEEEecCCCCCCC-C-C-CCChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHh
Confidence 445789999999999999999997 9 6 59999999999999987522100 0000 00 0 0
Q ss_pred CCCc--------ccccC---CCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCe
Q 022920 122 SNCS--------TLESL---SSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS 190 (290)
Q Consensus 122 ~~~~--------~~~~~---~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~ 190 (290)
..+. ..++. ...++++++.|++ |...|+||++|++.+|+|+.+.++.+++.++|++++++ .+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~g-G~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~----~~v~ 370 (472)
T PRK09133 296 ANPADEAAIALLSADPSYNAMLRTTCVATMLEG-GHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVAD----PAIK 370 (472)
T ss_pred cCcchHHHHHHHhcCcchhheeeeeEEeeEEec-CCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcC----CCEE
Confidence 0000 00000 1256899999998 89999999999999999999999999999999998753 3444
Q ss_pred EEEEEe-ecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEE---EEEecCCCCCCC
Q 022920 191 CIVERK-HDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGM---LFVRCRGGISHS 265 (290)
Q Consensus 191 ~e~~~~-~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~---~f~g~~~~~~H~ 265 (290)
+++... ...++...+..+++.+++++++.++. .+ ..+..++|++|+.++... +|++. +|+|+..+.+|+
T Consensus 371 v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g----~~--~~~~~~~ggtDa~~~~~~gip~~~~~~i~gp~~~~~aH~ 444 (472)
T PRK09133 371 ITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPG----VP--VIPSMSTGATDGRYLRAAGIPTYGVSGLFGDPDDTFAHG 444 (472)
T ss_pred EEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCC----Cc--eeccccccccchHHHHhcCCCceeecCcccCcccccCCC
Confidence 433211 11234556778999999999887521 11 122245688999999876 78752 345444456999
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 266 PAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 266 ~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+|||+..+++.+..++|..++.+|
T Consensus 445 ~dE~v~i~~l~~~~~~l~~~l~~l 468 (472)
T PRK09133 445 LNERIPVASFYEGRDFLYELVKDL 468 (472)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999876
No 40
>PRK13004 peptidase; Reviewed
Probab=99.89 E-value=6e-22 Score=183.80 Aligned_cols=205 Identities=15% Similarity=0.173 Sum_probs=153.6
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+.+|..+++|+++|+++|++. | +.|.||+..+++++..|+.+.... .. .+..+..+++++.
T Consensus 175 ~i~~~~~G~~~~~v~v~G~~~Ha~~-p-~~g~nAi~~~~~~i~~l~~~~~~~--------~~-----~~~~~~~~~~v~~ 239 (399)
T PRK13004 175 NIYRGQRGRMEIRVETKGVSCHGSA-P-ERGDNAIYKMAPILNELEELNPNL--------KE-----DPFLGKGTLTVSD 239 (399)
T ss_pred ceEEecceEEEEEEEEeccccccCC-C-CCCCCHHHHHHHHHHHHHhhcccc--------cc-----CCcCCCceEEEee
Confidence 3556789999999999999999997 9 899999999999999998875421 00 1122346789999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEE-------------eecCCcCC--CC
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVER-------------KHDANAVM--CD 205 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~-------------~~~~~~~~--~d 205 (290)
|.+++.+.|+||++|++.+|+|+.+.++.+.+.++|+++++. ...++++++.. ...+|++. .|
T Consensus 240 i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 317 (399)
T PRK13004 240 IFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPED 317 (399)
T ss_pred eecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccccccccCCC
Confidence 987456999999999999999999999999999999988432 22344444321 12345544 46
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh-h-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHH
Q 022920 206 ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-L-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVL 283 (290)
Q Consensus 206 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~-~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~ 283 (290)
.++++.+.+++++.+|.++ ......+++|.+.+.. . +|++ .|++...+.+|++|||+..+++.+.+++|.
T Consensus 318 ~~~~~~l~~a~~~~~g~~~-------~~~~~~~~td~~~~~~~~Gip~v-~~Gpg~~~~aH~~nE~i~i~~l~~~~~~~~ 389 (399)
T PRK13004 318 HEFVKAAVEAYKGLFGKAP-------EVDKWTFSTNGVSIAGRAGIPTI-GFGPGKEPLAHAPNEYTWKEQLVKAAAMYA 389 (399)
T ss_pred CHHHHHHHHHHHHHhCCCC-------eecccccccCCeEEehhcCCCEE-EECCCcccccCCCCceeEHHHHHHHHHHHH
Confidence 7899999999999876531 1111235677666643 4 8976 454433346899999999999999999999
Q ss_pred HHHHhcC
Q 022920 284 AFLETHV 290 (290)
Q Consensus 284 ~~l~~l~ 290 (290)
.++.+++
T Consensus 390 ~~~~~~~ 396 (399)
T PRK13004 390 AIPKSLL 396 (399)
T ss_pred HHHHHHh
Confidence 9998764
No 41
>PRK08737 acetylornithine deacetylase; Provisional
Probab=99.89 E-value=1.7e-21 Score=178.50 Aligned_cols=202 Identities=12% Similarity=0.051 Sum_probs=143.0
Q ss_pred EEEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 61 GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
.++.+++|..+++|+++|+++|+|. |.+.|+||+..+++++.++.+....... ... ++. ...++++|.
T Consensus 159 ~~~~~~kG~~~~~v~v~Gk~aHas~-p~~~G~NAI~~~~~~l~~~~~~~~~~~~-----~~~-----~~~-~~~t~~vg~ 226 (364)
T PRK08737 159 EAVLAHRGISSVLMRFAGRAGHASG-KQDPSASALHQAMRWGGQALDHVESLAH-----ARF-----GGL-TGLRFNIGR 226 (364)
T ss_pred eeEEecceeEEEEEEEEeeccccCC-CcccCCCHHHHHHHHHHHHHHHHHhhhh-----hcc-----CCC-CCCceEEee
Confidence 3556799999999999999999998 6258999999999999887654321000 000 111 246899999
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe-ecCCcCCCC-HHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-HDANAVMCD-ADLSSQLKSASYA 218 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~-~~~~~~~~d-~~l~~~~~~~~~~ 218 (290)
|++ |.+.|+||++|++.+|+|+.+.++.++++++|+++++. ...++++... ..+++...+ ..++..+.+.+.+
T Consensus 227 i~G-G~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (364)
T PRK08737 227 VEG-GIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFRGPSLPSGDIARAEERRLAARDVAD 301 (364)
T ss_pred Eec-CCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEeccCCCCCcccCcchHHHHHHHHHHh
Confidence 998 89999999999999999999999999999999877764 2334443332 234444333 2444444333333
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHh
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLET 288 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~ 288 (290)
..|. +. ... .++++|++++.+. +|++. |+|.....+|++|||+.++++.+.+++|..++.+
T Consensus 302 ~~~~-----~~-~~~--~~~~tDa~~~~~~Gip~v~-~GpG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 302 ALDL-----PI-GNA--VDFWTEASLFSAAGYTALV-YGPGDIAQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred hhcC-----CC-Cce--eccccCHHHHHHcCCCEEE-ECCCChhhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 3332 11 111 3468999999876 89864 5443334689999999999999999999988753
No 42
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.88 E-value=2.3e-21 Score=176.83 Aligned_cols=189 Identities=21% Similarity=0.201 Sum_probs=142.5
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
+..+.+|..+++|+++|+++|+|. | +.++||+..+++++.+++++..+.. .. .......+++++.|
T Consensus 160 i~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~-------~~-----~~~~~~~~~~~~~i 225 (352)
T PRK13007 160 IEAGCQGTLRVTVTFHGRRAHSAR-S-WLGENAIHKAAPVLARLAAYEPREV-------VV-----DGLTYREGLNAVRI 225 (352)
T ss_pred eEeeccceEEEEEEEEecccccCC-C-ccCcCHHHHHHHHHHHHHHhccccc-------cc-----CCCCccceeEeEeE
Confidence 445689999999999999999997 9 8999999999999999988754310 00 00111347899999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcC--CCCHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAA 219 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~--~~d~~l~~~~~~~~~~~ 219 (290)
++ |.+.|+||++|++.+|+|+.+.++.+++.++|++++++.+ ++++. ..+++. ..+.++++.+.++
T Consensus 226 ~g-G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 293 (352)
T PRK13007 226 SG-GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-----EVEVT--DLAPGARPGLDHPAAAALVAA---- 293 (352)
T ss_pred ec-CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-----EEEee--cccCCCCCCCCCHHHHHHHHH----
Confidence 98 8999999999999999999999999999999998876532 44443 233332 2355666666665
Q ss_pred HhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 022920 220 LKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFL 286 (290)
Q Consensus 220 ~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l 286 (290)
+|.. ... ..|++|+++++.. +|++. |++...+.+|++|||+..+++.+++++|..++
T Consensus 294 ~g~~-------~~~--~~g~td~~~~~~~Gip~v~-~Gpg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 294 VGGE-------VRA--KYGWTDVARFSALGIPAVN-FGPGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred hCCC-------Ccc--ccccchHHHHHhCCCCEEE-eCCCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 2321 111 3478999999876 89764 44433346999999999999999999998876
No 43
>PRK07906 hypothetical protein; Provisional
Probab=99.87 E-value=4.6e-21 Score=179.30 Aligned_cols=208 Identities=22% Similarity=0.217 Sum_probs=144.6
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-C-ccc--cC--CCCCCcccccC-----
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPK-D-FLS--YD--GRSNCSTLESL----- 130 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~-~-~~~--~~--~~~~~~~~~~~----- 130 (290)
++.+.+|..+++|+++|+++|+|. | + +.||+..+++++.+|++...+.. . ... |. ........++.
T Consensus 184 i~~~~kG~~~~~v~v~G~~~Hss~-p-~-~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (426)
T PRK07906 184 IETAEKGLAWMRLTARGRAGHGSM-V-N-DDNAVTRLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDAL 260 (426)
T ss_pred EEeccceEEEEEEEEEeCCCCCCC-C-C-CCCHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHH
Confidence 566799999999999999999998 8 5 49999999999999976432100 0 000 00 00000000000
Q ss_pred -------------CCCeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEee
Q 022920 131 -------------SSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH 197 (290)
Q Consensus 131 -------------~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~ 197 (290)
...++++++.|++ |.+.|+||++|++.+|+|+.+.+. +++.++|++++. .+++++...
T Consensus 261 ~~~~g~~~~~~~~~~~~t~~~~~i~g-G~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~~~~~-------~~v~~~~~~ 331 (426)
T PRK07906 261 LAKLGPAARMVGATLRNTANPTMLKA-GYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVDELLG-------PDVEREWVH 331 (426)
T ss_pred HHHHhhcCcchhhhhcccccceeEec-cCccccCCCceEEEEEEeECCCCc-HHHHHHHHHHhC-------CCeEEEEec
Confidence 0035899999998 889999999999999999998875 556666666542 234444434
Q ss_pred cCCcC--CCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecC-------CCCCCCCc
Q 022920 198 DANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCR-------GGISHSPA 267 (290)
Q Consensus 198 ~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~-------~~~~H~~~ 267 (290)
..++. ..|.++++.+++++++..+.. . ..+. ..+|++|+++|... +|+ +.|+|.. .+.+|++|
T Consensus 332 ~~~~~~~~~~~~~v~~l~~a~~~~~~~~---~--~~~~-~~~ggtDa~~~~~~g~p~-~~~gp~~~~~~~~~~~~~H~~~ 404 (426)
T PRK07906 332 RDPALETPFDGPLVDAMNAALLAEDPGA---R--VVPY-MLSGGTDAKAFSRLGIRC-YGFAPLRLPPDLDFAALFHGVD 404 (426)
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHCCCC---e--Eeee-eecccCcHHHHHhcCCce-EEEeccccCccccccccCcCCC
Confidence 45554 446789999999998874320 1 1222 24578999999876 554 5677653 14589999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 022920 268 EHVLDDDVWAAGLAVLAFLET 288 (290)
Q Consensus 268 E~~~~e~~~~~~~~~~~~l~~ 288 (290)
||+..+++.+.+++|..++.+
T Consensus 405 E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 405 ERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred CceeHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 44
>PRK06446 hypothetical protein; Provisional
Probab=99.87 E-value=7.7e-21 Score=178.28 Aligned_cols=217 Identities=14% Similarity=0.135 Sum_probs=153.4
Q ss_pred EEEEeeecceEEEEEEEe--cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-----C---Cc-----------cccC
Q 022920 61 GVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP-----K---DF-----------LSYD 119 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G--~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~-----~---~~-----------~~~~ 119 (290)
.++.+.+|..+++|+++| +++|+|. | +.+.||+..+++++.+|.+..... + .. ++++
T Consensus 173 ~i~~~~kG~~~~~l~v~G~~~~~Hss~-p-~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK06446 173 QIVLGVKGLLYVELVLRTGTKDLHSSN-A-PIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDID 250 (436)
T ss_pred EEEEecCeEEEEEEEEEeCCCCCCCCC-C-ccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCC
Confidence 466789999999999999 9999997 8 899999999999999997542100 0 00 0000
Q ss_pred ----------CCCCCc----ccccCCCCeEEEEEEEEecC---CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHH
Q 022920 120 ----------GRSNCS----TLESLSSSLVCTVGEISSWP---SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 182 (290)
Q Consensus 120 ----------~~~~~~----~~~~~~~~~~~~vg~i~~~g---~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 182 (290)
...... ........+++|++.++++. .+.|+||++|++.+|+|+.+.++.+++.++|++++++
T Consensus 251 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~ 330 (436)
T PRK06446 251 VEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQK 330 (436)
T ss_pred HHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 000000 00001124688999998732 4679999999999999999999999999999999876
Q ss_pred HHHhcCCeEEEEEeecCCcCC--CCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh-h-CCeEEEEEec
Q 022920 183 ICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-L-TKVGMLFVRC 258 (290)
Q Consensus 183 ~a~~~g~~~e~~~~~~~~~~~--~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~-~-~P~~~~f~g~ 258 (290)
. +..+++.....++|.. .+.++++.+.+++++.+|..+ .... .++|++|+++|.+ . +|++...+|.
T Consensus 331 ~----~~~~~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~-----~~~~-~~~g~~d~~~~~~~~gip~v~~~~g~ 400 (436)
T PRK06446 331 V----GFNGEIIVHGFEYPVRTSVNSKVVKAMIESAKRVYGTEP-----VVIP-NSAGTQPMGLFVYKLGIRDIVSAIGV 400 (436)
T ss_pred c----CCCeEEEEcCCcceeecCCCCHHHHHHHHHHHHHhCCCC-----ceec-CCCCcchHHHHHHHhCCCcceeeccc
Confidence 2 3445555444455543 357899999999999876531 1111 2345678888865 3 8876422232
Q ss_pred C--CCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 259 R--GGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 259 ~--~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+ ....|++|||+..+++...+++|..++.++
T Consensus 401 g~~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~ 433 (436)
T PRK06446 401 GGYYSNAHAPNENIRIDDYYKAIKHTEEFLKLY 433 (436)
T ss_pred CCCCcCCcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 2 245899999999999999999999999865
No 45
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.87 E-value=7.3e-21 Score=172.63 Aligned_cols=187 Identities=12% Similarity=0.125 Sum_probs=142.2
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHH-HhcCCCCccccCCCCCCcccccCCCCeEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER-LCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE 140 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~ 140 (290)
+..+.+|..+++|+++|+++|+|. | . ||+..+.+++..|.+ +..+. .. ...+++++.
T Consensus 142 i~~~~kG~~~~~v~~~G~~~Hss~-~-~---~ai~~~~~~~~~l~~~~~~~~----------------~~-~~~~~~~~~ 199 (336)
T TIGR01902 142 ITLGYKGSLQLKIMCEGTPFHSSS-A-G---NAAELLIDYSKKIIEVYKQPE----------------NY-DKPSIVPTI 199 (336)
T ss_pred eeeeeeeEEEEEEEEEecCcccCC-C-h---hHHHHHHHHHHHHHHHhcccc----------------CC-CCCcceeEE
Confidence 445699999999999999999997 7 4 489999999998874 33220 11 134678888
Q ss_pred EEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCC--CCHHHHHHHHHHHHH
Q 022920 141 ISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYA 218 (290)
Q Consensus 141 i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~--~d~~l~~~~~~~~~~ 218 (290)
+++ |.+.|+||++|++.+|+|+.+.++.+++.++|++ ...++ +.....++|+. .|+++++.+++++++
T Consensus 200 i~g-g~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~-------~~~~~--~~~~~~~~p~~~~~~~~lv~~~~~a~~~ 269 (336)
T TIGR01902 200 IRF-GESYNDTPAKLELHFDLRYPPNNKPEEAIKEITD-------KFPIC--LEIVDETPPYKVSRNNPLVRAFVRAIRK 269 (336)
T ss_pred EEc-cCCCcCCCceEEEEEEEeeCCCCCHHHHHHHHHh-------ccCce--EEEEeccCceecCCCCHHHHHHHHHHHH
Confidence 998 8999999999999999999999999988887776 12333 33334556653 467899999999988
Q ss_pred HHhhccCCCCCccccccCccchHHHHHhhh--CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 219 ALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 219 ~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.. . ..+...++|++|++++.+. +|++ .|++...+.+|++|||+..+++.+.+.+|..++..|
T Consensus 270 ~~-~-------~~~~~~~~g~tD~~~~~~~~g~p~v-~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l 333 (336)
T TIGR01902 270 QG-M-------KPRLKKKTGTSDMNILAPIWTVPMV-AYGPGDSTLDHTPQEKISLAEYLIGIKTLMLAIEEL 333 (336)
T ss_pred cC-C-------CeEEeeccccCccceeccccCCCeE-EECCCCcccCCCCcceeEHHHHHHHHHHHHHHHHHH
Confidence 62 2 1222234578999999875 5655 355544456899999999999999999999999876
No 46
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.86 E-value=1.9e-20 Score=174.25 Aligned_cols=190 Identities=13% Similarity=0.053 Sum_probs=143.1
Q ss_pred eecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecC
Q 022920 66 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWP 145 (290)
Q Consensus 66 ~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g 145 (290)
..|..+++|+++|+++|++..| +.++||+..+++++..+..... +. .++.+++.+++ |
T Consensus 210 ~~g~~~~~I~v~Gk~aHa~~~~-~~g~nAi~~a~~~~~~l~~~~~------------------~~--~t~~~~g~i~~-g 267 (410)
T TIGR01882 210 TFSAAAAKITIQGNNVHPGTAK-GKMINAAQIAIDLHNLLPEDDR------------------PE--YTEGREGFFHL-L 267 (410)
T ss_pred cccceEEEEEEEEEecCcccCh-HHHHHHHHHHHHHHHhcCCcCC------------------Cc--cccceeEEEEE-E
Confidence 4688999999999999999845 6899999999888665443211 11 11223455665 4
Q ss_pred CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCC-eEEEEEeecCC----cCCCCHHHHHHHHHHHHHHH
Q 022920 146 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV-SCIVERKHDAN----AVMCDADLSSQLKSASYAAL 220 (290)
Q Consensus 146 ~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~-~~e~~~~~~~~----~~~~d~~l~~~~~~~~~~~~ 220 (290)
..|.||++|++.+|+|+++.+..+.++++|++++++++..+++ .+++++...++ ...+|+++++.+++++++.
T Consensus 268 -~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~- 345 (410)
T TIGR01882 268 -SIDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL- 345 (410)
T ss_pred -eEEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-
Confidence 4778999999999999999999999999999999999887774 45555443343 4567889999999999874
Q ss_pred hhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHh
Q 022920 221 KRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLET 288 (290)
Q Consensus 221 g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~ 288 (290)
|.+ .....+.||+|+++|+.. +|++.++. +....|++|||+..+++.+.+++|..++..
T Consensus 346 G~~-------~~~~~~~ggtDa~~~~~~Gip~~~~G~--G~~~aHt~dE~v~i~~l~~~~~~~~~li~~ 405 (410)
T TIGR01882 346 GIE-------PKISPIRGGTDGSQLSYMGLPTPNIFA--GGENMHGRFEYISVDNMVKAVDVIVEIAKL 405 (410)
T ss_pred CCC-------CcccccceechHHHHHhCCCCCCeEcC--CcccCcCCceEEEHHHHHHHHHHHHHHHHH
Confidence 432 111224589999999876 78764333 233499999999999999999999988764
No 47
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.86 E-value=2.8e-20 Score=169.61 Aligned_cols=192 Identities=16% Similarity=0.124 Sum_probs=145.9
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
+..+++|..+++|+++|+++|+|. | +.||+..+++++..|+++..... .. ++..++.+++++.|
T Consensus 153 i~~~~kG~~~~~l~~~G~~~Hss~-~---g~NAi~~~~~~l~~l~~~~~~~~-------~~-----~~~~~~~~~~i~~i 216 (348)
T PRK04443 153 ITLGYKGRLLVTYVATSESFHSAG-P---EPNAAEDAIEWWLAVEAWFEAND-------GR-----ERVFDQVTPKLVDF 216 (348)
T ss_pred eeeecccEEEEEEEEEeCCCccCC-C---CCCHHHHHHHHHHHHHHHHhcCc-------cc-----cccccccceeeeEE
Confidence 445789999999999999999996 7 68999999999999988643100 00 11223567888888
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCC--CCHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAA 219 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~--~d~~l~~~~~~~~~~~ 219 (290)
+. ..|+||++|++.+|+|..+.++.+++.++|++++. ++++++ ...+||+. .|.++++.+++++++.
T Consensus 217 ~~---~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~ 285 (348)
T PRK04443 217 DS---SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTF--TGAVPAYMVSKRTPLARAFRVAIREA 285 (348)
T ss_pred ec---CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEE--ecCCCceecCCCCHHHHHHHHHHHHh
Confidence 74 45999999999999999999999999999999873 334433 33455544 4567999999999987
Q ss_pred HhhccCCCCCccccccCccchHHHHHhhh--CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 220 LKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 220 ~g~~~~~~~~~~~~~~s~g~~D~~~~~~~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.++. .....+|++|+++|.+. +|++ .|++.....+|++|||+..+++.+..++|..++.+|
T Consensus 286 ~~~~--------~~~~~~g~tD~~~~~~~~gip~v-~~Gpg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 286 GGTP--------RLKRKTGTSDMNVVAPAWGCPMV-AYGPGDSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred cCCc--------ceeccccCCcHHHHhhhcCCCEE-EECCCCccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 5421 11124588999999763 7876 454433345899999999999999999999998775
No 48
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.85 E-value=6.6e-20 Score=173.79 Aligned_cols=189 Identities=15% Similarity=0.098 Sum_probs=144.9
Q ss_pred eecceEEEEEEEe-cCCCCCCCCCCCC-CcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEe
Q 022920 66 IAGQTRLKVTVRG-SQGHAGTVPMSMR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISS 143 (290)
Q Consensus 66 ~~g~~~~~i~v~G-~~~Ha~~~P~~~g-~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~ 143 (290)
.+|..+++|+++| +++|+|..|| .+ .||+.++++++.++++.. ..+++.+.+
T Consensus 192 ~kG~~~~~i~~~G~~~~Hsg~~p~-~~r~nAi~~aa~~i~~l~~~~-------------------------~~~v~~~~g 245 (477)
T TIGR01893 192 TKNEEGYQISLKGLKGGHSGADIH-KGRANANKLMARVLNELKENL-------------------------NFRLSDIKG 245 (477)
T ss_pred CCCceEEEEEEeCcCCCcCccccC-CCCcCHHHHHHHHHHhhhhcC-------------------------CeEEEEEeC
Confidence 3788999999999 9999987795 55 699999999998877531 135788887
Q ss_pred cCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHh--cCC--------------------------------
Q 022920 144 WPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK--RSV-------------------------------- 189 (290)
Q Consensus 144 ~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~--~g~-------------------------------- 189 (290)
|++.|+||++|++.+|+|..+.+.++.+.+.+.+.+++.+.. .++
T Consensus 246 -g~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g 324 (477)
T TIGR01893 246 -GSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNG 324 (477)
T ss_pred -CCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCcc
Confidence 899999999999999999999999999888888887766521 111
Q ss_pred --------------------------------------------------------eEEEEEeecCCcCCC--CHHHHHH
Q 022920 190 --------------------------------------------------------SCIVERKHDANAVMC--DADLSSQ 211 (290)
Q Consensus 190 --------------------------------------------------------~~e~~~~~~~~~~~~--d~~l~~~ 211 (290)
.++++....+||+.. |.++++.
T Consensus 325 ~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~~~~~~p~~~~~d~plv~~ 404 (477)
T TIGR01893 325 VQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEVSAGYPSWQPDPQSNLLDT 404 (477)
T ss_pred ceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEEecCCCcccCCCCCHHHHH
Confidence 123333345666554 5679999
Q ss_pred HHHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCeE--EEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 212 LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVG--MLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 212 ~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~--~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+.+++++.+|.+ .....++|++|.++|.+.+|.+ ..|++ +....|++|||+..+++.+.++++..++..|
T Consensus 405 l~~a~~~~~g~~-------~~~~~~~Ggtd~~~~~~~~~~i~~v~~Gp-~~~~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 405 ARKVYSEMFGED-------PEVKVIHAGLECGIISSKIPDIDMISIGP-NIYDPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred HHHHHHHHHCCC-------CeEEEeecCccHHHHHhhCCCceEEEeCC-CCCCCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 999999998763 1122356889999998865543 33433 3445999999999999999999999998764
No 49
>PRK08201 hypothetical protein; Provisional
Probab=99.85 E-value=6e-20 Score=173.24 Aligned_cols=218 Identities=17% Similarity=0.160 Sum_probs=149.6
Q ss_pred EEEEeeecceEEEEEEEecCC--CCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-----CCccc--------------cC
Q 022920 61 GVVQGIAGQTRLKVTVRGSQG--HAGTVPMSMRQDPMTAAAELIVLLERLCKHP-----KDFLS--------------YD 119 (290)
Q Consensus 61 g~v~~~~g~~~~~i~v~G~~~--Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~--------------~~ 119 (290)
.++.+.+|..+++|+++|+++ |+|..| ..+.||+..+++++.+|+++..+. ++.+. ++
T Consensus 191 ~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~-~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (456)
T PRK08201 191 AICYGLRGLAALEIDVRGAKGDLHSGLYG-GAVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFD 269 (456)
T ss_pred EEEEecCCeEEEEEEEEeCCCCCcccccc-CcCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCC
Confidence 366789999999999999998 998734 455899999999999997642110 00000 00
Q ss_pred C-------CCCCcccccC-------CCCeEEEEEEEEec---CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHH
Q 022920 120 G-------RSNCSTLESL-------SSSLVCTVGEISSW---PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 182 (290)
Q Consensus 120 ~-------~~~~~~~~~~-------~~~~~~~vg~i~~~---g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 182 (290)
. ......-.+. ....++|++.|+++ ++..|+||++|++.+|+|..+.++.+++.++|++.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~ 349 (456)
T PRK08201 270 EEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQA 349 (456)
T ss_pred HHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0 0000000000 01357899999872 23479999999999999999999999999999999876
Q ss_pred HHHhcCCeEEEEEeecCCcCC--CCHHHHHHHHHHHHHHHhhccCCCCCccccccCccch---HHHHHhhh-CCeEEEEE
Q 022920 183 ICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGH---DAMAMSHL-TKVGMLFV 256 (290)
Q Consensus 183 ~a~~~g~~~e~~~~~~~~~~~--~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~---D~~~~~~~-~P~~~~f~ 256 (290)
.. ..++++++.....++++. .|.++++.+.+++++.+|.+ . ..... +++ |+.+.... +|++. |+
T Consensus 350 ~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~---~----~~~~~-gg~~~~~~~~~~~~gip~v~-~G 419 (456)
T PRK08201 350 HT-PAGVRVTIRRFDKGPAFVAPIDHPAIQAAARAYEAVYGTE---A----AFTRM-GGSIPVVETFSSQLHIPIVL-MG 419 (456)
T ss_pred hC-CCCeEEEEEECCCcCceecCCCCHHHHHHHHHHHHHhCCC---c----eecCC-CCcHHHHHHHHHHhCCCEEE-ec
Confidence 32 234556654434456544 35679999999999887653 1 11122 333 66666544 88864 44
Q ss_pred ecC-CCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 257 RCR-GGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 257 g~~-~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
++. ...+|++|||+..+++.+.+++|..++.+|
T Consensus 420 pG~~~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~ 453 (456)
T PRK08201 420 FGLPSENFHAPNEHFHLENFDKGLRTLVEYWHQL 453 (456)
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 332 245899999999999999999999998875
No 50
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=99.85 E-value=6.1e-20 Score=168.87 Aligned_cols=185 Identities=18% Similarity=0.124 Sum_probs=133.4
Q ss_pred EEEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEE
Q 022920 62 VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
++.+.+|..+++|+++|+++|++. | +.|.||+..+++++.+|+++..... .. ++.....++|++.|
T Consensus 174 i~~g~~G~~~~~i~v~G~~~H~s~-p-~~g~NAi~~~~~~i~~l~~l~~~~~-------~~-----~~~~~~~t~~v~~I 239 (373)
T TIGR01900 174 IEAGCNGNIRFDVTAHGVAAHSAR-A-WLGDNAIHKAADIINKLAAYEAAEV-------NI-----DGLDYREGLNATFC 239 (373)
T ss_pred ccccceeeEEEEEEEEeeccccCC-C-CCCCCHHHHHHHHHHHHHHhhcccc-------cc-----cCCcccceEEEEEE
Confidence 556799999999999999999997 9 8999999999999999988754210 00 11112468999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHH--------HHHh---cC-CeEEEEEeecCCcC--CCCHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ--------ICEK---RS-VSCIVERKHDANAV--MCDAD 207 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~--------~a~~---~g-~~~e~~~~~~~~~~--~~d~~ 207 (290)
++ |.+.|+||++|++.+|+|+.+.++.+++.+.|++.++. +.+. .+ ..++++.....++. ..+.+
T Consensus 240 ~G-G~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (373)
T TIGR01900 240 EG-GKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDEAGGALPGLGAP 318 (373)
T ss_pred eC-CCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcccCCCCCCCCCCH
Confidence 98 89999999999999999999999999999999765422 2221 11 12333322222222 33567
Q ss_pred HHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCC
Q 022920 208 LSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVL 271 (290)
Q Consensus 208 l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~ 271 (290)
+++.+.++++++++.+ ... ..+++|+++|... +|++. |++.....+|++|||+.
T Consensus 319 ~~~~~~~a~~~~~~~~-------~~~--~~g~tD~~~~~~~gip~v~-~Gpg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 319 LAQDLIDAVGEEKGRD-------PLA--KFGWTDVARFSALGIPALN-FGAGDPLFAHKHDEQCP 373 (373)
T ss_pred HHHHHHHHHHhccCCC-------ccc--ccCCccHHHHHhcCCCEEE-eCCCChhhccCCCCCCC
Confidence 8888888888876542 111 3477899999765 89874 55543346899999974
No 51
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.84 E-value=1.4e-19 Score=169.07 Aligned_cols=207 Identities=15% Similarity=0.094 Sum_probs=151.1
Q ss_pred eeecceEEEEEEEecC----------CCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCe
Q 022920 65 GIAGQTRLKVTVRGSQ----------GHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSL 134 (290)
Q Consensus 65 ~~~g~~~~~i~v~G~~----------~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
+.+|...++++++|++ +|++. | +.|.||+..+++++.+|+.+.... ... .... ....+..
T Consensus 184 ~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~-p-~~G~nai~~~~~~i~~l~~~~~~~-~~~---~~~~----~~~~~~~ 253 (421)
T PRK08596 184 GQGGVITGWITVKSPQTFHDGTRRQMIHAGG-G-LFGASAIEKMMKIIQSLQELERHW-AVM---KSYP----GFPPGTN 253 (421)
T ss_pred cccceeeEEEEEEeecccccccccccccccC-C-ccCcCHHHHHHHHHHHHHHHHHHH-hhc---ccCc----cCCCCCc
Confidence 4567776777777763 79997 9 899999999999999998864210 000 0000 0001246
Q ss_pred EEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHh------cCCeEEEE-----E--eecCCc
Q 022920 135 VCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK------RSVSCIVE-----R--KHDANA 201 (290)
Q Consensus 135 ~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~------~g~~~e~~-----~--~~~~~~ 201 (290)
++|++.|++ |...|+||++|++.+|+|+.++++.++++++|++.+++.+.. ..+.+++. . ...+|+
T Consensus 254 t~~v~~i~g-G~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (421)
T PRK08596 254 TINPAVIEG-GRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGEIFPS 332 (421)
T ss_pred ceeeeeeeC-CCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccccCCC
Confidence 889999998 899999999999999999999999999999999999876531 11222211 0 113566
Q ss_pred CCC--CHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 202 VMC--DADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 202 ~~~--d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
+.. |.++++.+.+++++.+|.+ .....+++++|++++... +|++ .|++.....+|++|||+.++++.+.
T Consensus 333 ~~~~~~~~~v~~l~~a~~~~~g~~-------~~~~~~~g~tD~~~~~~~gip~v-~~Gpg~~~~~H~~~E~v~i~~~~~~ 404 (421)
T PRK08596 333 LEIDSEHPAVKTLSSAHESVLSKN-------AILDMSTTVTDGGWFAEFGIPAV-IYGPGTLEEAHSVNEKVEIEQLIEY 404 (421)
T ss_pred ccCCCCchHHHHHHHHHHHHhCCC-------CeeeEEeeecchhhhhhcCCCEE-EECCCcccccCCCCceEEHHHHHHH
Confidence 544 5679999999999887653 122234578999999876 8976 3444333458999999999999999
Q ss_pred HHHHHHHHHhcC
Q 022920 279 GLAVLAFLETHV 290 (290)
Q Consensus 279 ~~~~~~~l~~l~ 290 (290)
+++|..++.+++
T Consensus 405 ~~~~~~~l~~~~ 416 (421)
T PRK08596 405 TKVITAFIYEWC 416 (421)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 52
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.84 E-value=7.3e-20 Score=173.04 Aligned_cols=197 Identities=17% Similarity=0.116 Sum_probs=138.7
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHH------H----hcCCCCccccC-CCCCCcccccCCCCeEEE
Q 022920 69 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER------L----CKHPKDFLSYD-GRSNCSTLESLSSSLVCT 137 (290)
Q Consensus 69 ~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~------~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 137 (290)
..+++|+++|+++|++. | +.|.|||..+++++.+|+. + .... . ..++ ........+...+..++|
T Consensus 255 ~~~~~i~v~G~aaH~s~-p-~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~~t~n 330 (466)
T PRK07318 255 GGKLVLTVIGKSAHGST-P-EKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYL-H-EDTRGEKLGIAYEDDVMGDLTMN 330 (466)
T ss_pred CCEEEEEEEeeEcccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhc-C-CCCCcccCCCcccCCCccCeEEE
Confidence 45899999999999997 9 9999999999999999864 1 0000 0 0000 000000001112356899
Q ss_pred EEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCc--CCCCHHHHHHHHHH
Q 022920 138 VGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA--VMCDADLSSQLKSA 215 (290)
Q Consensus 138 vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~--~~~d~~l~~~~~~~ 215 (290)
+|.|++ |... +|++.+|+|+.+.++.+++.++|++++++ .++ +++....+|| ...|+++++.++++
T Consensus 331 vg~i~g-g~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~~--~~~~~~~~~p~~~~~d~~lv~~l~~a 398 (466)
T PRK07318 331 VGVFSF-DEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TGV--ELSEHEHQKPHYVPKDDPLVKTLLKV 398 (466)
T ss_pred eeEEEE-ecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cCe--EEEEccCCCceeeCCCCHHHHHHHHH
Confidence 999998 4321 79999999999999999999999998754 344 4444445655 44577899999999
Q ss_pred HHHHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 216 SYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+++.+|.+ .....++|++|++++...+|.+..|.|. .+.+|++|||+..+++.+.+++|..++.++
T Consensus 399 ~~~~~g~~-------~~~~~~~ggtDa~~~~~~i~~Gp~~pg~-~~~aH~~dE~v~i~~l~~~~~v~~~~l~~~ 464 (466)
T PRK07318 399 YEKQTGLK-------GEEQVIGGGTYARLLKRGVAFGAMFPGS-EDTMHQANEYIEIDDLIKAAAIYAEAIYEL 464 (466)
T ss_pred HHHHhCCC-------CCeeEEcchHhHhhCCCeEEeCCCCCCC-CCCCcCCCcceeHHHHHHHHHHHHHHHHHH
Confidence 99876642 2233456889999997544432222221 234899999999999999999999999876
No 53
>PRK06156 hypothetical protein; Provisional
Probab=99.83 E-value=2.1e-19 Score=171.81 Aligned_cols=199 Identities=15% Similarity=0.088 Sum_probs=143.2
Q ss_pred EEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC--------CCcc---c-cCCCCCCcccccCCCCeEEEE
Q 022920 71 RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP--------KDFL---S-YDGRSNCSTLESLSSSLVCTV 138 (290)
Q Consensus 71 ~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~--------~~~~---~-~~~~~~~~~~~~~~~~~~~~v 138 (290)
+++|+++|+++|+|. | +.|.||+..+++++.+|+++.... +... . +.....-...++..+..++++
T Consensus 300 ~~~I~v~Gk~aHsS~-P-~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~ 377 (520)
T PRK06156 300 DVTITVTGKSAHSST-P-ESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSP 377 (520)
T ss_pred eEEEEEEeEECCCCC-C-CCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEee
Confidence 899999999999997 9 999999999999999987521100 0000 0 000000000012224567788
Q ss_pred EEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcC-CCCHHHHHHHHHHHH
Q 022920 139 GEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV-MCDADLSSQLKSASY 217 (290)
Q Consensus 139 g~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~-~~d~~l~~~~~~~~~ 217 (290)
+.|.+ |. +.|++.+|+|+.+.++.++++++|++.+++++...++++++......|.. ..|.++++.+.++++
T Consensus 378 ~~I~g-g~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~~~p~~~~~d~~lv~~l~~a~~ 450 (520)
T PRK06156 378 TVVGQ-DD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYWGEPMVRDPKGPWLKTLLDVFG 450 (520)
T ss_pred eEEEE-eC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecCCCceeeCCCCHHHHHHHHHHH
Confidence 88887 43 68999999999999999999999999998877667777766532222322 235679999999999
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCCC---CCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGG---ISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~~---~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+.+|.+ ..+..++|++|++++. .++.|+|...+ .+|++|||+..+++.....+|..++.++
T Consensus 451 ~~~G~~-------~~~~~~~ggTDa~~~~----~~v~fGP~~~g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l 514 (520)
T PRK06156 451 HFTGLD-------AKPVAIAGSTNAKLFP----NAVSFGPAMPGVKYTGHTENEFKTVEQFMLDLQMYTEMLIRI 514 (520)
T ss_pred HHhCCC-------CceeeecChhhhhhCC----ccEEEcCCCCCCCCCCcCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 887652 2223456889998873 36677775332 4899999999999999999999999876
No 54
>PRK09104 hypothetical protein; Validated
Probab=99.83 E-value=3.6e-19 Score=168.32 Aligned_cols=216 Identities=15% Similarity=0.110 Sum_probs=150.7
Q ss_pred EEEeeecceEEEEEEEe--cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccc--cCC--CCCC-----------
Q 022920 62 VVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLS--YDG--RSNC----------- 124 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G--~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~--~~~--~~~~----------- 124 (290)
++.+.+|..+|+|+++| +++|+|..| +.+.||+..+++++.+|++...+. .++ |+. ..++
T Consensus 200 i~~~~kG~~~~~l~v~g~~~~~Hss~~~-~~g~nai~~~~~~l~~l~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (464)
T PRK09104 200 ITTSLRGLVGEEVTITAADRDLHSGLFG-GAAANPIRVLTRILAGLHDETGRV--TLPGFYDGVEELPPEILAQWKALGF 276 (464)
T ss_pred EEeecCCeEEEEEEEEeCCCCccccccC-CccCCHHHHHHHHHHhccCCCCCE--eCCccccCCCCCCHHHHHHHHhCCC
Confidence 55679999999999999 689999657 789999999999999987632110 000 000 0000
Q ss_pred ----c----c-cccC-----------CCCeEEEEEEEEecCC----CcceeCCeEEEEEEecCCChHHHHHHHHHHHHHH
Q 022920 125 ----S----T-LESL-----------SSSLVCTVGEISSWPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 180 (290)
Q Consensus 125 ----~----~-~~~~-----------~~~~~~~vg~i~~~g~----~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~ 180 (290)
+ . ..|. ...+++|++.|++ |. +.|+||++|++.+|+|+.+.++.+++.++|++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g-g~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l 355 (464)
T PRK09104 277 TAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWG-GYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYV 355 (464)
T ss_pred CHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEecccc-CCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 0 0 0000 0135789999997 53 5799999999999999999999999999999998
Q ss_pred HHHHHhcCCeEEEEEeecCCcC--CCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccch-HHHHHhhh--CCeEEEE
Q 022920 181 YQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGH-DAMAMSHL--TKVGMLF 255 (290)
Q Consensus 181 ~~~a~~~g~~~e~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~-D~~~~~~~--~P~~~~f 255 (290)
++.. ..+.++++......|+. ..+.++++.+.+++++.+|.+ . ... .++|+. |++.|... +|++.+.
T Consensus 356 ~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~---~--~~~--~~~g~~~~~~~~~~~~gip~v~~g 427 (464)
T PRK09104 356 RARL-PADCSVEFHDHGGSPAIALPYDSPALAAAKAALSDEWGKP---A--VLI--GSGGSIPIVGDFKRILGMDSLLVG 427 (464)
T ss_pred HHhC-CCCeEEEEEecCCCCceECCCCCHHHHHHHHHHHHHhCCC---c--eec--CCCCcHHHHHHHHHHhCCCEEEec
Confidence 7531 23445555433345554 345779999999999987653 1 112 233443 56666543 7876433
Q ss_pred EecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 256 VRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 256 ~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.|...+..|++|||+..+++.+..++|..++.++
T Consensus 428 ~G~~~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~ 461 (464)
T PRK09104 428 FGLDDDRIHSPNEKYDLESFHKGIRSWARILAAL 461 (464)
T ss_pred CCCCCCCCcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 3323345999999999999999999999998875
No 55
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.83 E-value=4.6e-19 Score=167.45 Aligned_cols=198 Identities=14% Similarity=0.137 Sum_probs=139.1
Q ss_pred eEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHH----------HHHhcCCCCccc-cCCCCCCcccccCCCCeEEEE
Q 022920 70 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL----------ERLCKHPKDFLS-YDGRSNCSTLESLSSSLVCTV 138 (290)
Q Consensus 70 ~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v 138 (290)
.|++|+++|+++|+|. | +.|+||+..+++++.++ +.+... .. .+ |.........++..+.+++|+
T Consensus 255 ~~~~i~v~G~~aH~s~-P-~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~~~~~~~~g~~S~nv 330 (466)
T TIGR01886 255 ESATIVLIGKGAHGAA-P-QVGINSATFLALFLNQYAFAGGAKNFIHFLAEV-EH-EDFYGEKLGIAFHDELMGDLAMNA 330 (466)
T ss_pred CEEEEEEEeeEcccCC-C-CCCcCHHHHHHHHHHhccCChhHHHHHHHHHHh-cC-CCCCcccCCCcccccCcCceEEEe
Confidence 3799999999999998 9 99999999999988872 222110 00 00 000000000022234789999
Q ss_pred EEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCc-CCCCHHHHHHHHHHHH
Q 022920 139 GEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASY 217 (290)
Q Consensus 139 g~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~-~~~d~~l~~~~~~~~~ 217 (290)
|.|++ |.. | ++|++.+|+|+.++++.+++.++|++.+.. .+++++......|. ...+.++++.+.++++
T Consensus 331 gvI~g-G~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~~~~~P~~~~~ds~lv~~l~~a~~ 400 (466)
T TIGR01886 331 GMFDF-DHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNGHFEEPHYVPGSDPLVQTLLKVYE 400 (466)
T ss_pred EEEEE-ecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEecccCCCcccCCCCHHHHHHHHHHH
Confidence 99998 544 4 899999999999999999999999998763 23444321122332 2335689999999999
Q ss_pred HHHhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 218 AALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+++|.+ .....+++++|+++|...+|.+. ++|.....+|++|||+..+++.+.+++|..++.+|
T Consensus 401 ~v~G~~-------~~~~~~~ggTDa~~~~~~i~~gv-~gPG~~~~aH~~dE~V~i~el~~a~~iy~~~i~~l 464 (466)
T TIGR01886 401 KHTGKK-------GHEVIIGGGTYGRLLERGVAYGA-MFEGGPDVMHQANEFMMLDDLILAAAIYAEAIYEL 464 (466)
T ss_pred HHhCCC-------CceeeecCccHHHhccccccccc-ccCCCCCCccCCCcceEHHHHHHHHHHHHHHHHHH
Confidence 987753 11223568899999976565443 33433346899999999999999999999999876
No 56
>PRK07907 hypothetical protein; Provisional
Probab=99.82 E-value=9.8e-19 Score=164.69 Aligned_cols=218 Identities=18% Similarity=0.114 Sum_probs=149.3
Q ss_pred EEEeeecceEEEEEEE--ecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CCccc-c-CCCCCCcc---c------
Q 022920 62 VVQGIAGQTRLKVTVR--GSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP-KDFLS-Y-DGRSNCST---L------ 127 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~--G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~-~~~~~-~-~~~~~~~~---~------ 127 (290)
++.+.+|..+++|+++ |+++|+|..+ ..+.||+..+++++.+|.+...+. +..+. + ......++ .
T Consensus 193 i~~~~kG~~~~~l~v~~~G~~~Hss~~~-~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (449)
T PRK07907 193 LTTSLRGNADVVVTVRTLEHAVHSGQFG-GAAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGV 271 (449)
T ss_pred EEEecCCcEEEEEEEEECCCCCCCcccc-ccCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhh
Confidence 4567999999999999 8899999734 678999999999999997643220 00000 0 00000000 0
Q ss_pred -------------ccCCCCeEEEEEEEEec--CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEE
Q 022920 128 -------------ESLSSSLVCTVGEISSW--PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCI 192 (290)
Q Consensus 128 -------------~~~~~~~~~~vg~i~~~--g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e 192 (290)
......+++|++.|+++ |.+.|+||++|++++|+|+.+.++.+++.+.|++.+++.. ..+.+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~ 350 (449)
T PRK07907 272 LDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVT 350 (449)
T ss_pred hhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEE
Confidence 00012458899999862 4688999999999999999999999999999999987642 2356666
Q ss_pred EEEeecCCcCC--CCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchH-HHHHhhh---CCeEEEEEecCC-CCCCC
Q 022920 193 VERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHD-AMAMSHL---TKVGMLFVRCRG-GISHS 265 (290)
Q Consensus 193 ~~~~~~~~~~~--~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D-~~~~~~~---~P~~~~f~g~~~-~~~H~ 265 (290)
++....++|+. .|.++++.+.+++++.+|.++ ... ..+|+.+ .+.|.+. +|++ .|++... ..+|+
T Consensus 351 ~~~~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~-----~~~--~~~g~~~~~~~~~~~~~~~~~v-~~Gpg~~~~~aH~ 422 (449)
T PRK07907 351 VERGDAGQPFAADASGPAYDAARAAMREAWGKDP-----VDM--GMGGSIPFIAELQEAFPQAEIL-VTGVEDPKTRAHS 422 (449)
T ss_pred EEECCCcCceeCCCCCHHHHHHHHHHHHHhCCCc-----eec--CCCCcHHHHHHHHHhcCCCcEE-EeccCCCCCCCcC
Confidence 66544455544 467899999999999887531 112 2334443 2334333 3443 3443322 45899
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 266 PAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 266 ~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
+|||+..+++.+.+++|+.++.+|
T Consensus 423 ~nE~i~i~~l~~~~~~~~~~l~~~ 446 (449)
T PRK07907 423 PNESVHLGELERAAVAEALLLARL 446 (449)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875
No 57
>PRK07205 hypothetical protein; Provisional
Probab=99.80 E-value=2.8e-18 Score=161.37 Aligned_cols=193 Identities=19% Similarity=0.122 Sum_probs=131.8
Q ss_pred EEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh-----cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecC
Q 022920 71 RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC-----KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWP 145 (290)
Q Consensus 71 ~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g 145 (290)
+.+|+++|+++|+|. | +.|.||+..+++++.++++.. .+.+....+.........+...+..++|+|.
T Consensus 239 ~~~v~v~G~~~Hss~-p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~----- 311 (444)
T PRK07205 239 ENEVTVLGKSVHAKD-A-PQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG----- 311 (444)
T ss_pred CcEEEEEeEEcccCC-C-ccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE-----
Confidence 348999999999998 9 899999999999998886431 0000000000000000001111245666654
Q ss_pred CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCc--CCCCHHHHHHHHHHHHHHHhhc
Q 022920 146 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA--VMCDADLSSQLKSASYAALKRM 223 (290)
Q Consensus 146 ~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~--~~~d~~l~~~~~~~~~~~~g~~ 223 (290)
.|+||++|++.+|+|+.+.++.+++.++|++++++ .++++ .....++| ...|.++++.+.+++++.+|..
T Consensus 312 --~nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~ 383 (444)
T PRK07205 312 --LTITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQE----YGLTY--EEFDYLAPLYVPLDSELVSTLMSVYQEKTGDD 383 (444)
T ss_pred --EEEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EEecCCCceeeCCCcHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999999999999998754 34444 32334455 3456789999999999887652
Q ss_pred cCCCCCccccccCccchHHHHHhhhCCeEEEEE---ecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 224 TGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFV---RCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 224 ~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~---g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.....++|++|..++. | ++.|+ |+..+.+|++|||+..+++.+.+++|..++.+|
T Consensus 384 -------~~~~~~gg~~~~~~~~---~-~i~~G~~~Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l 441 (444)
T PRK07205 384 -------SPAQSSGGATFARTMP---N-CVAFGALFPGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRL 441 (444)
T ss_pred -------CceEEeccHHHHHhCC---C-cEEECCccCCCCCCCcCcccCccHHHHHHHHHHHHHHHHHH
Confidence 1233356677766542 3 33444 433456999999999999999999999999876
No 58
>PRK07079 hypothetical protein; Provisional
Probab=99.80 E-value=6.7e-18 Score=159.83 Aligned_cols=216 Identities=15% Similarity=0.079 Sum_probs=146.1
Q ss_pred EEEeeecceEEEEEEEec--CCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-----------------CCccccCCC-
Q 022920 62 VVQGIAGQTRLKVTVRGS--QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP-----------------KDFLSYDGR- 121 (290)
Q Consensus 62 ~v~~~~g~~~~~i~v~G~--~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~-----------------~~~~~~~~~- 121 (290)
++.+++|..+++|+++|+ +.|++. +...+.||+..++.++.++.+...+. +..+..+..
T Consensus 200 i~~g~kG~~~~~v~v~G~~~~~hs~~-~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (469)
T PRK07079 200 LFLGSRGAVNFRLRVNLRDGAHHSGN-WGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGP 278 (469)
T ss_pred EEEecceEEEEEEEEeeCCCCCCCCc-cccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhh
Confidence 667899999999999998 456664 21234799999999998885421110 000000000
Q ss_pred ----CCCc----cc---ccCCCCeEEEEEEEEecC---CCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhc
Q 022920 122 ----SNCS----TL---ESLSSSLVCTVGEISSWP---SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR 187 (290)
Q Consensus 122 ----~~~~----~~---~~~~~~~~~~vg~i~~~g---~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~ 187 (290)
.... .. .+.....++|++.|++ | ...|+||++|++.+|+|+.+.++.+++.++|++++++..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~g-G~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~--- 354 (469)
T PRK07079 279 GDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKT-GNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG--- 354 (469)
T ss_pred hccCcccccCCCCcCHHHHHhhCCceEEEeeec-CCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---
Confidence 0000 00 0001135789999998 5 368999999999999999999999999999999987632
Q ss_pred CCeEEEEEeecCCcC--CCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh-h-CCeEEEEEecC-CCC
Q 022920 188 SVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-L-TKVGMLFVRCR-GGI 262 (290)
Q Consensus 188 g~~~e~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~-~-~P~~~~f~g~~-~~~ 262 (290)
...++++....++|. ..|.++++.+.+++++.+|.. .. ... ..++++|..+|.. . +|++. |.+.. ++.
T Consensus 355 ~~~v~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~---~~--~~~-~~~g~~d~~~~~~~~giP~v~-~g~~~~~~~ 427 (469)
T PRK07079 355 FPMVEVTVERGSPATRLDPDDPWVRWALASIARTTGKK---PA--LLP-NLGGSLPNDVFADILGLPTLW-VPHSYPACS 427 (469)
T ss_pred CCCeEEEEeCCCCceecCCCCHHHHHHHHHHHHHhCCC---Cc--eec-CCCcchhHHHHHHHhCCCEEE-ecCCCCCcc
Confidence 112455544455554 346779999999999887653 11 111 1346678888875 3 89873 42222 234
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 263 SHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 263 ~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.|++|||+..+++...+.+|..++.++
T Consensus 428 ~H~~dE~v~l~~l~~~~~~~~~~~~~~ 454 (469)
T PRK07079 428 QHAPNEHLLASVAREGLQIMAGLFWDL 454 (469)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999876
No 59
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.75 E-value=5.7e-17 Score=153.35 Aligned_cols=188 Identities=15% Similarity=0.108 Sum_probs=142.1
Q ss_pred ecceEEEEEEEe-cCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEec
Q 022920 67 AGQTRLKVTVRG-SQGHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSW 144 (290)
Q Consensus 67 ~g~~~~~i~v~G-~~~Ha~~~P~~~g~-nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~ 144 (290)
+|..+|+|+++| +++||+..| +.|+ ||+..+++++.++. + .++++++.|+|
T Consensus 199 ~g~~~~~i~v~Gl~ggHsG~~i-~~g~~nAi~~la~~l~~~~----~---------------------~~~~~v~~i~G- 251 (485)
T PRK15026 199 AGFETFKLTLKGLKGGHSGGEI-HVGLGNANKLLVRFLAGHA----E---------------------ELDLRLIDFNG- 251 (485)
T ss_pred CCceEEEEEEECCCCcCChHHH-CCCCccHHHHHHHHHHHhH----h---------------------hCCeEEEEEeC-
Confidence 577899999999 999999768 8999 99999999998733 1 24578999998
Q ss_pred CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHH----------------------------------h-cCC
Q 022920 145 PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE----------------------------------K-RSV 189 (290)
Q Consensus 145 g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~----------------------------------~-~g~ 189 (290)
|++.|+||++|++.+++|..+.+..+.+.+.+.+.+++.-. . +|+
T Consensus 252 G~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv 331 (485)
T PRK15026 252 GTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGV 331 (485)
T ss_pred CCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCccc
Confidence 99999999999999999998877777777766555441000 0 010
Q ss_pred ---------------------------e----------------------------EEEEEeecCCcCCCC--HHHHHHH
Q 022920 190 ---------------------------S----------------------------CIVERKHDANAVMCD--ADLSSQL 212 (290)
Q Consensus 190 ---------------------------~----------------------------~e~~~~~~~~~~~~d--~~l~~~~ 212 (290)
. .+++....||++..+ .++++.+
T Consensus 332 ~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~~~~~~~~p~w~~~~ds~lv~~l 411 (485)
T PRK15026 332 IRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLV 411 (485)
T ss_pred EEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcEEEEeCCCCCCCCCCCCHHHHHH
Confidence 0 112223458888775 5799999
Q ss_pred HHHHHHHHhhccCCCCCccccccCccchHHHHHhhhCCe--EEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 213 KSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKV--GMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~--~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.+++++++|++ .......||.|.+.|+++.|. +..|+|... ..|++||++.++++......+..+|.+|
T Consensus 412 ~~~y~e~~G~~-------~~~~~ihaglEcG~~~~~~p~i~~VsfGP~~~-~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 412 RETYQRLFNKT-------PNIQIIHAGLECGLFKKPYPEMDMVSIGPTIT-GPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred HHHHHHHHCCC-------CeEEEEEEEehHHHHHhhCCCCCEEEECCCCC-CCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 99999999874 122235589999999988776 455666544 4899999999999987777777777654
No 60
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.75 E-value=1.6e-17 Score=126.40 Aligned_cols=109 Identities=28% Similarity=0.391 Sum_probs=93.0
Q ss_pred eeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEec
Q 022920 65 GIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSW 144 (290)
Q Consensus 65 ~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~ 144 (290)
+++|..+++|+++|+++|+|. | +.++||+..+++++..|+++..+.. .. ......+..+++++.+++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~-~-~~g~nai~~~~~~l~~l~~~~~~~~--------~~--~~~~~~~~~~~~~~~i~g- 68 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSR-P-EKGVNAIEAAARFLNALEELEFEWA--------FR--PEEFFPGPPTLNIGSIEG- 68 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTS-G-GGSBCHHHHHHHHHHHHHHTTCHBT--------ST--HHHCTCTSEEEEEEEEEE-
T ss_pred cCCCEEEEEEEEEeeccCCCC-c-cCccCHHHHHHHHHHHHHHhhcccc--------cc--cccccccccceeEeeccc-
Confidence 589999999999999999996 9 9999999999999999998754310 00 000112478999999999
Q ss_pred CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHh
Q 022920 145 PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 186 (290)
Q Consensus 145 g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~ 186 (290)
|...|+||++|++.+++|+.+.++.+++++.|++.+++++.+
T Consensus 69 G~~~n~ip~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 69 GTAPNVIPDEATLTVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp ESSTTEESSEEEEEEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCEECCEEEEEEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 889999999999999999999999999999999999988754
No 61
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.69 E-value=2.2e-15 Score=141.57 Aligned_cols=190 Identities=17% Similarity=0.124 Sum_probs=125.9
Q ss_pred EEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHH--HHhcCCCC---ccc----cCCCCCCcccccCCCCeEEEEEEE
Q 022920 71 RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE--RLCKHPKD---FLS----YDGRSNCSTLESLSSSLVCTVGEI 141 (290)
Q Consensus 71 ~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~--~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~vg~i 141 (290)
+++|+++|+++|+|. | ++|.||+..+++++.++. +...+... ... |.........++..+.+++|+|.|
T Consensus 244 ~~~i~v~G~~aHss~-p-~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I 321 (447)
T TIGR01887 244 TATITLEGKSAHGSA-P-EKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVI 321 (447)
T ss_pred EEEEEEEeeecccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEE
Confidence 799999999999998 9 999999999999999886 22111000 000 000000000011123578999999
Q ss_pred EecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCC--CCHHHHHHHHHHHHHH
Q 022920 142 SSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAA 219 (290)
Q Consensus 142 ~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~--~d~~l~~~~~~~~~~~ 219 (290)
++ | .|+.|++.+|+|+.++++.+++++++.+.+. +. .++......+|.. .|.++++.+.+++++.
T Consensus 322 ~~-g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~~~~p~~~~~~~~lv~~l~~~~~~~ 388 (447)
T TIGR01887 322 DY-E-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENGYLKPLYVPKDDPLVQTLMKVYEKQ 388 (447)
T ss_pred EE-e-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEccCCCCeEECCCCHHHHHHHHHHHHH
Confidence 98 5 3899999999999999999977777664322 22 2222222233333 3568999999999998
Q ss_pred HhhccCCCCCccccccCccchHHHHHhhhCCeEEEEEecCC---CCCCCCcCCCCHHHHHHHHHHHHHHH
Q 022920 220 LKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG---GISHSPAEHVLDDDVWAAGLAVLAFL 286 (290)
Q Consensus 220 ~g~~~~~~~~~~~~~~s~g~~D~~~~~~~~P~~~~f~g~~~---~~~H~~~E~~~~e~~~~~~~~~~~~l 286 (290)
+|.+ . ......|++|+.++ |.++.|+|... ..+|++|||+.++++....++|..++
T Consensus 389 ~g~~---~----~~~~~~ggtda~~~----~~~i~~Gp~~pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 389 TGDE---G----TPVAIGGGTYARLM----ENGVAFGALFPGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred hCCC---C----CeeEecchhhhhhC----CCcEEeCCCCCCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 7753 1 22234567887765 33455665422 24899999999999999999988753
No 62
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=3.9e-15 Score=133.16 Aligned_cols=206 Identities=17% Similarity=0.171 Sum_probs=149.5
Q ss_pred EEeeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEE
Q 022920 63 VQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEIS 142 (290)
Q Consensus 63 v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~ 142 (290)
..+.+|.++++|+++|++||+|. || -..|+.++.+++..+.+.+.++...++ .-+ .....+.++++++.|+
T Consensus 203 fyaEkg~w~~~v~~~G~~GHss~-~~--~nTa~~~l~klv~~~~~fr~~q~~~l~---~~p---~~~~~~vtT~Nv~~i~ 273 (420)
T KOG2275|consen 203 FYAEKGPWWLKVTANGTPGHSSY-PP--PNTAIEKLEKLVESLEEFREKQVDLLA---SGP---KLALGDVTTINVGIIN 273 (420)
T ss_pred EEEeeceeEEEEEecCCCCCCCC-CC--CccHHHHHHHHHHHHHHhHHHHHHHhh---cCC---ceeccceeEEeeeeee
Confidence 45699999999999999999998 63 478999999999999887643221110 000 0122358899999999
Q ss_pred ecCCCcceeCCeEEEEEEecCCChHHHHHHHHHH-HHHHHHHHHhcCCeEEEEEe--ecCCcCCC---CHHHHHHHHHHH
Q 022920 143 SWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL-SNQLYQICEKRSVSCIVERK--HDANAVMC---DADLSSQLKSAS 216 (290)
Q Consensus 143 ~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i-~~~~~~~a~~~g~~~e~~~~--~~~~~~~~---d~~l~~~~~~~~ 216 (290)
| |.+.|++|+++++.+|+|..+..+.+.+.+++ ++++++.. .|..+++... ..+++... +.+....+..++
T Consensus 274 G-Gv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~~~--eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~ 350 (420)
T KOG2275|consen 274 G-GVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEEAG--EGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGAL 350 (420)
T ss_pred c-ccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhhcC--CceEEeccCcccCCCCCCCCCCCCChHHHHHHHHH
Confidence 9 99999999999999999999999999999998 66655422 2344444322 13443322 345788888888
Q ss_pred HHHHhhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCC--CCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 217 YAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGG--ISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~--~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
++..++ . .+.+ ..|++|.+++... +|. +.|.|+.+. .+|..|||.-.+-.+++..+|..+|..+
T Consensus 351 ~~~~~k----~---~~~i-~~gstdsr~~rn~gvp~-~~fsp~~nt~~~~H~hnE~l~~~~~l~gi~~~~~~i~~~ 417 (420)
T KOG2275|consen 351 KDEGGK----G---YPEI-GPGSTDSRHIRNEGVPA-IGFSPIINTPMLLHDHNEFLNEKVFLRGIEIYYTIIVNL 417 (420)
T ss_pred HHhcCc----c---ceee-cccccccchhhhcCcch-hcccccccccceecchhhhhCchhhhhhhhHHHHHHHhh
Confidence 887433 2 2332 3489999999887 664 567777664 4899999988888899999988876544
No 63
>PRK08554 peptidase; Reviewed
Probab=99.59 E-value=2.2e-14 Score=134.53 Aligned_cols=131 Identities=16% Similarity=0.087 Sum_probs=100.0
Q ss_pred Cccee---CCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCC--cCCCCHHHHHHHHHHHHHHHh
Q 022920 147 ASNVI---PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDAN--AVMCDADLSSQLKSASYAALK 221 (290)
Q Consensus 147 ~~NvI---P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~--~~~~d~~l~~~~~~~~~~~~g 221 (290)
..|++ |++|++.+|+|+.+ .+.+++.++|+++++.. ..+++++++.....+ .+..|+++++.+++++++ +|
T Consensus 301 ~~n~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~-~g 376 (438)
T PRK08554 301 TPNVYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKE-LG 376 (438)
T ss_pred ccceEEecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEeccCCCCcCCCCChHHHHHHHHHHHH-hC
Confidence 56666 99999999999987 57899999999988653 245666665432333 344578899999999987 44
Q ss_pred hccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhcC
Q 022920 222 RMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290 (290)
Q Consensus 222 ~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l~ 290 (290)
.+ ..+..++|++|+++++.. +|++. |++.+ ...|++|||+..+++.+.+++|..++.+|+
T Consensus 377 ~~-------~~~~~~~GgtDa~~~~~~Gip~v~-~Gp~~-~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 377 ED-------AEPVEGPGASDSRYFTPYGVKAID-FGPKG-GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred CC-------cEEEecCCchHHHHHHhcCCCceE-ECCCC-CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 32 233346789999999776 99865 54433 468999999999999999999999998874
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.52 E-value=1.6e-13 Score=125.85 Aligned_cols=193 Identities=16% Similarity=0.086 Sum_probs=159.0
Q ss_pred eeecceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEec
Q 022920 65 GIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSW 144 (290)
Q Consensus 65 ~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~ 144 (290)
-..+...+++++.|+..|++..+ ...+||+..+.++...+.... ....++.+.|..+.
T Consensus 213 ea~~~~~~~~~~~g~~~h~~~a~-~~~i~a~~~a~e~~~~~~~~~--------------------~~e~t~~~~Gv~~~- 270 (414)
T COG2195 213 EAFNAAAVRATIVGPNVHPGSAK-GKMINALLLAAEFILELPLEE--------------------VPELTEGPEGVYHL- 270 (414)
T ss_pred eccchheeeeeeeccCcCccchH-HHHhhHHHhhhhhhhcCCccc--------------------ccccccccceEEec-
Confidence 46778889999999999999866 788999998888877544311 11256678898888
Q ss_pred CCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcC--CeEEEEEeecCCcCCC--CHHHHHHHHHHHHHHH
Q 022920 145 PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERKHDANAVMC--DADLSSQLKSASYAAL 220 (290)
Q Consensus 145 g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g--~~~e~~~~~~~~~~~~--d~~l~~~~~~~~~~~~ 220 (290)
++..|.|.+++.....+|..++...+..+..+++.+++.+++.+ ..++++....||.+.. ++.+++.++++++++.
T Consensus 271 ~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~Yp~~~~~~~~~iv~~a~~a~~~l~ 350 (414)
T COG2195 271 GDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEVKDSYPGWKIKPDSPLVDLAKKAYKELG 350 (414)
T ss_pred cccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEEeccccCcCCCCCchHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999988888 7788888888987665 4569999999999985
Q ss_pred hhccCCCCCccccccCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHh
Q 022920 221 KRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLET 288 (290)
Q Consensus 221 g~~~~~~~~~~~~~~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~ 288 (290)
.+ +...++.||+|.+.++.+ .|+.++|+|. ....|+++||+.++.+.+...++..++..
T Consensus 351 ~~--------p~v~~i~gGtd~~~is~~g~p~~~i~~Gp-~~n~Hs~~E~v~I~s~ek~~~~l~~l~~~ 410 (414)
T COG2195 351 IK--------PKVKPIHGGTDGGVLSFKGLPTPNISTGP-GENPHSPDEFVSIESMEKAVQVLVELLKL 410 (414)
T ss_pred CC--------ceEEEeecccchhhhhccCCCCceEeccc-ccCCCCccceeehHHHHHHHHHHHHHHHH
Confidence 43 222236699999999887 7888889885 44599999999999999988888887764
No 65
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.03 E-value=1.8e-08 Score=90.22 Aligned_cols=233 Identities=16% Similarity=0.168 Sum_probs=148.9
Q ss_pred eeccCCcccccCCCceEEEEeeecceEEEEEEEe--cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-----CCCccc
Q 022920 45 VHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKH-----PKDFLS 117 (290)
Q Consensus 45 ~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G--~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~-----~~~~~~ 117 (290)
+-+...+.+++.. +-+-.|.+|...|.|+|+| +-.|++..- -.-.-|+..+..++..|.+...+ .++.++
T Consensus 191 vciSdnyWlg~kk--PcltyGlRG~~yf~i~v~g~~~DlHSGvfG-G~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~va 267 (473)
T KOG2276|consen 191 VCISDNYWLGTKK--PCLTYGLRGVIYFQIEVEGPSKDLHSGVFG-GVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVA 267 (473)
T ss_pred EEeeCceeccCCC--cccccccccceeEEEEEeeccccccccccc-chhHHHHHHHHHHHHHhcCcCCcEeccchhhhcc
Confidence 4456777777433 3243478999999999999 669999522 23346777777777777664443 111111
Q ss_pred ---------cCC----------CCCCcccccC----------CCCeEEEEEEE----EecCCCcceeCCeEEEEEEecCC
Q 022920 118 ---------YDG----------RSNCSTLESL----------SSSLVCTVGEI----SSWPSASNVIPGEVTFTVDLRAI 164 (290)
Q Consensus 118 ---------~~~----------~~~~~~~~~~----------~~~~~~~vg~i----~~~g~~~NvIP~~a~~~~diR~~ 164 (290)
|+. .+... .-+. ...+++++..| .+ +++..|||.++.-++.||++
T Consensus 268 plteeE~~~y~~I~f~~~e~~~~tg~~-~l~~~~k~~~l~~rWryPSLsihgIeGaFs~-pG~kTVIP~kVigkfSiRlV 345 (473)
T KOG2276|consen 268 PLTEEEDSIYDDIDFDVEEFKEATGSQ-MLPTDDKKRILMHRWRYPSLSIHGIEGAFSG-PGAKTVIPAKVVGKFSIRLV 345 (473)
T ss_pred CCChHHHhhhhcceeeHhhhhcccccc-ccccCchHHHhhhhcccCccceecccceeeC-CCceEEeehhheeeeEEEec
Confidence 111 00000 0000 11334555554 44 67889999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcCC--eEEEEEeecCCcCCCC--HHHHHHHHHHHHHHHhhccCCCCCccccccCccc-
Q 022920 165 DDAGRETVLYELSNQLYQICEKRSV--SCIVERKHDANAVMCD--ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAG- 239 (290)
Q Consensus 165 ~~~~~~~v~~~i~~~~~~~a~~~g~--~~e~~~~~~~~~~~~d--~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~- 239 (290)
|..+.+++.+.+.+.++..-.+.+. ++++.......++..| +.-+.+++++.+.++|-+| ....-||+
T Consensus 346 P~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~~~~~y~a~krA~~~v~gveP-------d~~ReGgSI 418 (473)
T KOG2276|consen 346 PNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDPDDPHYLALKRAIETVYGVEP-------DFTREGGSI 418 (473)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCCCchhHHHHHHHHHHhhCCCC-------CccccCCcc
Confidence 9999999999999988876655543 3555555555566554 4578889999999987542 11112222
Q ss_pred hHHHHHhhhCCeEEEEEecC--CCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920 240 HDAMAMSHLTKVGMLFVRCR--GGISHSPAEHVLDDDVWAAGLAVLAFLETH 289 (290)
Q Consensus 240 ~D~~~~~~~~P~~~~f~g~~--~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l 289 (290)
.=...|....-.-...+|++ +...|+.||+....+...+.+++.+++.+|
T Consensus 419 Pvt~tfQ~~~~~~V~llP~G~~dD~aHsqNEkl~i~N~~~G~k~l~ay~~el 470 (473)
T KOG2276|consen 419 PVTLTFQDITGKSVLLLPYGASDDGAHSQNEKLNITNYVEGTKVLAAYISEL 470 (473)
T ss_pred ceehHHHHHhCCCeEEecccccccchhhhcccccHHHHhhhHHHHHHHHHHH
Confidence 11223333322112344444 456999999999999999999999998876
No 66
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=97.81 E-value=4.1e-05 Score=63.11 Aligned_cols=79 Identities=22% Similarity=0.173 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh--hCCeEEEEEecCCCCCCCCcCCCCHHHHHHHH
Q 022920 202 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH--LTKVGMLFVRCRGGISHSPAEHVLDDDVWAAG 279 (290)
Q Consensus 202 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~--~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~ 279 (290)
...++++++.+.+++++.++. ......+++++|+.++.+ .....++++|++....|++|||+..+++.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~~~~H~~~E~i~~~~l~~~~ 180 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGE-------PPEPVASGGGTDAGFLAEVKGLGIPAIGFGPGGSNAHTPDEYIDIEDLVKGA 180 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSS-------EEEEEEESSSSTHHHHHCHHHTTEEEEEEESCEESTTSTT-EEEHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhc-------cccccceeccccchhhhhhhccccceeeeCCCCCCCCCCCcEecHHHHHHHH
Confidence 346777999999999998541 112224568999999996 44444456666556799999999999999999
Q ss_pred HHHHHHHH
Q 022920 280 LAVLAFLE 287 (290)
Q Consensus 280 ~~~~~~l~ 287 (290)
++|..+|.
T Consensus 181 ~~~~~~l~ 188 (189)
T PF01546_consen 181 KIYAALLE 188 (189)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998875
No 67
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=97.09 E-value=0.0019 Score=58.87 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHH--HHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 202 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAM--AMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 202 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~--~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
...|+.+.+.+.+.+++. +++... ..++||+|++ +++.. +|++.+.+|+.. +|++.|.+..+|+...
T Consensus 261 ~i~~~~l~~~l~~~A~~~------~I~~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--~Hs~~e~i~~~D~~~~ 330 (350)
T TIGR03107 261 HIMLPRMKDFLLTTAEEA------GIKYQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCARY--IHSHQTLYSIDDFLAA 330 (350)
T ss_pred CCCCHHHHHHHHHHHHHc------CCCcEE--ecCCCCchHHHHHHhCCCCcEEEEccCccc--ccChhheeeHHHHHHH
Confidence 445788999999999886 465433 3456799999 44434 999988888765 9999999999999999
Q ss_pred HHHHHHHHHhc
Q 022920 279 GLAVLAFLETH 289 (290)
Q Consensus 279 ~~~~~~~l~~l 289 (290)
...+.+++.+|
T Consensus 331 ~~Ll~~~i~~l 341 (350)
T TIGR03107 331 QAFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHHhc
Confidence 99998888754
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=96.96 E-value=0.0023 Score=58.31 Aligned_cols=80 Identities=13% Similarity=0.117 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhh--h-CCeEEEEEecCCCCCCCCcCCCCHHHHHH
Q 022920 201 AVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH--L-TKVGMLFVRCRGGISHSPAEHVLDDDVWA 277 (290)
Q Consensus 201 ~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~--~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~ 277 (290)
....|+.+++.+++++++. +++.... ...++|+|++.+.. . +|++.+.+|.. .+|+++|++..+++..
T Consensus 251 ~~i~~~~l~~~l~~~A~~~------~Ip~Q~~-~~~ggGTDa~~~~~~~~Giptv~ig~p~r--y~Hs~~E~v~~~D~~~ 321 (344)
T PRK09961 251 SLIAPPKLTAWIETVAAEI------GIPLQAD-MFSNGGTDGGAVHLTGTGVPTVVMGPATR--HGHCAASIADCRDILQ 321 (344)
T ss_pred CcCCCHHHHHHHHHHHHHc------CCCcEEE-ecCCCcchHHHHHHhCCCCCEEEechhhh--cccChhheEEHHHHHH
Confidence 3445788999999999886 3433221 23456899997755 3 89987766654 5999999999999999
Q ss_pred HHHHHHHHHHhc
Q 022920 278 AGLAVLAFLETH 289 (290)
Q Consensus 278 ~~~~~~~~l~~l 289 (290)
..+.+..++..|
T Consensus 322 ~~~Ll~~~i~~l 333 (344)
T PRK09961 322 MIQLLSALIQRL 333 (344)
T ss_pred HHHHHHHHHHHc
Confidence 999998887553
No 69
>PRK09864 putative peptidase; Provisional
Probab=96.68 E-value=0.008 Score=54.91 Aligned_cols=79 Identities=19% Similarity=0.127 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh---CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 202 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 202 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~---~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
...|+.+.+.+.+.+++. ++++.... .++||+|+..+... +|++.+.+|... +|+|.|.+..+|+...
T Consensus 260 ~i~~~~l~~~l~~~A~~~------~Ip~Q~~~-~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--~Hs~~e~~~~~D~e~~ 330 (356)
T PRK09864 260 YFPNQKLVAALKSCAAHN------DLPLQFST-MKTGATDGGRYNVMGGGRPVVALCLPTRY--LHANSGMISKADYDAL 330 (356)
T ss_pred ccCCHHHHHHHHHHHHHc------CCCceEEE-cCCCCchHHHHHHhCCCCcEEEEeeccCc--CCCcceEeEHHHHHHH
Confidence 344778899999999886 46544333 34479999988553 899988888875 8999999999999999
Q ss_pred HHHHHHHHHhc
Q 022920 279 GLAVLAFLETH 289 (290)
Q Consensus 279 ~~~~~~~l~~l 289 (290)
.+.+..++.+|
T Consensus 331 ~~Ll~~~~~~l 341 (356)
T PRK09864 331 LTLIRDFLTTL 341 (356)
T ss_pred HHHHHHHHHhc
Confidence 98888887654
No 70
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.013 Score=53.38 Aligned_cols=78 Identities=24% Similarity=0.239 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh---CCeEEEEEecCCCCCCCCcCCCCHHHHHHHH
Q 022920 203 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVGMLFVRCRGGISHSPAEHVLDDDVWAAG 279 (290)
Q Consensus 203 ~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~---~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~ 279 (290)
..++.+.+.+.+.+++. ++++..... .++|+|++.+... +|++.+.+|+.. +|++.|.+..+++....
T Consensus 266 ~~~~~l~~~L~~~A~~~------~Ip~Q~~v~-~~ggTDA~a~~~~g~gvpta~Igip~ry--~Hs~~e~~~~~D~~~~~ 336 (355)
T COG1363 266 IYHPKLRKFLLELAEKN------NIPYQVDVS-PGGGTDAGAAHLTGGGVPTALIGIPTRY--IHSPVEVAHLDDLEATV 336 (355)
T ss_pred CCCHHHHHHHHHHHHHc------CCCeEEEec-CCCCccHHHHHHcCCCCceEEEeccccc--ccCcceeecHHHHHHHH
Confidence 33788999999999986 465543332 3479999999665 899887777754 89999999999999999
Q ss_pred HHHHHHHHhc
Q 022920 280 LAVLAFLETH 289 (290)
Q Consensus 280 ~~~~~~l~~l 289 (290)
+.+..++.++
T Consensus 337 ~Ll~~~i~~~ 346 (355)
T COG1363 337 KLLVAYLESL 346 (355)
T ss_pred HHHHHHHHhc
Confidence 9998888764
No 71
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=95.15 E-value=0.075 Score=48.47 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh---CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 202 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 202 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~---~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
...|+.+.+.+.+++++. ++++.... .+++|+|++.+... +|++.+.+|... +|+ .|.+..+|+...
T Consensus 262 ~~~~~~l~~~l~~~A~~~------~Ip~Q~~~-~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry--~Hs-~e~~~~~D~~~~ 331 (343)
T TIGR03106 262 GPFDYHLTRKLIRLCQDH------GIPHRRDV-FRYYRSDAASAVEAGHDIRTALVTFGLDA--SHG-YERTHIDALEAL 331 (343)
T ss_pred CCCCHHHHHHHHHHHHHc------CCCcEEEe-cCCCCChHHHHHHcCCCCCEEEeeccccc--hhh-hhhccHHHHHHH
Confidence 345889999999999886 46544333 34579999888553 899988888765 899 999999999998
Q ss_pred HHHHHHHH
Q 022920 279 GLAVLAFL 286 (290)
Q Consensus 279 ~~~~~~~l 286 (290)
.+.+..++
T Consensus 332 ~~Ll~~~~ 339 (343)
T TIGR03106 332 ANLLVAYA 339 (343)
T ss_pred HHHHHHHh
Confidence 88887776
No 72
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=93.96 E-value=0.22 Score=46.14 Aligned_cols=151 Identities=15% Similarity=0.076 Sum_probs=84.3
Q ss_pred HHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCCCCCCCCCCCc
Q 022920 14 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 93 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~n 93 (290)
.|+..+-|+.-..+.|...+.+- .+.....+..+.-.+.+....--.+.+|..|-.---.-|.|+..|+|. | -.|+|
T Consensus 172 dEE~~s~G~r~a~~~L~~L~kk~-~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~-~-f~Gvn 248 (553)
T COG4187 172 DEEVESRGMREARPALPGLKKKF-DLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGY-P-FEGVN 248 (553)
T ss_pred chhhhcccHHHHHHHHHHHHHhh-CceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCC-c-ccCCC
Confidence 35555666665555555444332 232222244444444443333344667778877777889999999998 9 59999
Q ss_pred HHHHHHHHHHHHHH---HhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcce-eCCeEEEEEEecCCChHHH
Q 022920 94 PMTAAAELIVLLER---LCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNV-IPGEVTFTVDLRAIDDAGR 169 (290)
Q Consensus 94 Ai~~aa~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~Nv-IP~~a~~~~diR~~~~~~~ 169 (290)
|-..++++...|+- +..+ ++.+..++ +..+-.--+ -++.|| .|..+.+.+++=+.. .+.
T Consensus 249 an~maSei~~~le~N~~l~dr------~~Ge~t~P-------Ps~L~qkDl---Ke~Y~VqTp~~a~~~fN~l~h~-~ta 311 (553)
T COG4187 249 ANFMASEITRRLELNADLADR------VDGEITPP-------PSCLEQKDL---KESYNVQTPERAWLYFNWLYHS-RTA 311 (553)
T ss_pred HHHHHHHHHHHhhcChhhhhh------hCCeeCCC-------cHhhhhhhh---hhhccccCcchhhhhheehhhc-CCH
Confidence 99999999998864 2222 12222111 111111111 233443 566777777776553 345
Q ss_pred HHHHHHHHHHHHHHH
Q 022920 170 ETVLYELSNQLYQIC 184 (290)
Q Consensus 170 ~~v~~~i~~~~~~~a 184 (290)
+++.+++++.++..+
T Consensus 312 ~~~~d~l~~~a~~A~ 326 (553)
T COG4187 312 KELFDRLKEEAETAA 326 (553)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555555554444
No 73
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=93.65 E-value=0.073 Score=47.42 Aligned_cols=69 Identities=25% Similarity=0.302 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHHHHhhh---CCeEEEEEecCCCCCCCCcCCCCHHHHHHHH
Q 022920 203 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVGMLFVRCRGGISHSPAEHVLDDDVWAAG 279 (290)
Q Consensus 203 ~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~~~~~~---~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~ 279 (290)
..|+.+.+.+.+++++. ++++... ...++++|++.+... +|++.+.+|+.. .|++.|.+..+|+....
T Consensus 220 i~~~~l~~~l~~~A~~~------~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--~Hs~~e~~~~~Di~~~~ 290 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN------GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--MHSPVEVIDLDDIEATI 290 (292)
T ss_dssp ESHHHHHHHHHHHHHHT------T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--TTSTTEEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc------CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--CCCcceEEEHHHHHHHh
Confidence 34678999999999986 4544332 345689999999653 799988898876 89999999999987654
Q ss_pred H
Q 022920 280 L 280 (290)
Q Consensus 280 ~ 280 (290)
+
T Consensus 291 ~ 291 (292)
T PF05343_consen 291 D 291 (292)
T ss_dssp H
T ss_pred h
Confidence 3
No 74
>PRK02256 putative aminopeptidase 1; Provisional
Probab=91.43 E-value=0.49 Score=44.84 Aligned_cols=76 Identities=21% Similarity=0.208 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCccccc----cCccchHHHHHhhh-CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 204 CDADLSSQLKSASYAALKRMTGATQHEIPVI----MSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 204 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~----~s~g~~D~~~~~~~-~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
.|..++..+++.+++. ++++....+ ..+||||...+++. +|++-+.+|... +|++.|.+..+|+...
T Consensus 380 ~~~~~~~~i~~iA~~~------~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l~--MHS~rE~~~~~D~~~~ 451 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN------NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALLS--MHSPFEIASKADIYET 451 (462)
T ss_pred CCHHHHHHHHHHHHHc------CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhhc--cccHHHHhhHHHHHHH
Confidence 3777888888888876 465332112 12579997777744 888876666543 9999999999999988
Q ss_pred HHHHHHHHH
Q 022920 279 GLAVLAFLE 287 (290)
Q Consensus 279 ~~~~~~~l~ 287 (290)
.+.+..++.
T Consensus 452 ~~ll~~f~~ 460 (462)
T PRK02256 452 YKAYKAFLE 460 (462)
T ss_pred HHHHHHHHh
Confidence 888877654
No 75
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=87.04 E-value=1.6 Score=41.69 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=38.8
Q ss_pred CeEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHH
Q 022920 133 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 182 (290)
Q Consensus 133 ~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 182 (290)
.+++|+|.++. + |+++.+++++|++++.+.+++.+.|++.++.
T Consensus 337 ~~t~n~g~i~~-~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 337 ESSLNLGVVKT-K------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred EeeeeEEEEEE-c------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 56889999987 4 6899999999999999999999999999874
No 76
>PRK02813 putative aminopeptidase 2; Provisional
Probab=84.03 E-value=2.8 Score=39.50 Aligned_cols=76 Identities=17% Similarity=-0.013 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCcccccc--CccchHHHHHhh-h--CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 204 CDADLSSQLKSASYAALKRMTGATQHEIPVIM--SGAGHDAMAMSH-L--TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 204 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--s~g~~D~~~~~~-~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
.|......+++.+++. +++....... +++|+|.+.+.. . +|++-+.+|... +|++.|....+|+...
T Consensus 346 t~~~~~a~~~~ia~~~------~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l~--MHS~~E~~~~~D~~~~ 417 (428)
T PRK02813 346 TDAESAAVFKLLCEKA------GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPMLA--MHSARELAGVKDHAYL 417 (428)
T ss_pred cCHHHHHHHHHHHHHc------CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhcc--cccHHHHccHHHHHHH
Confidence 4677888888888875 4543322211 236778777754 3 888876666543 9999999999999988
Q ss_pred HHHHHHHHH
Q 022920 279 GLAVLAFLE 287 (290)
Q Consensus 279 ~~~~~~~l~ 287 (290)
.+.+..++.
T Consensus 418 ~~l~~~f~~ 426 (428)
T PRK02813 418 IKALTAFFS 426 (428)
T ss_pred HHHHHHHhc
Confidence 888777653
No 77
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=78.38 E-value=6.6 Score=37.42 Aligned_cols=76 Identities=17% Similarity=0.034 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCcccccc--CccchHHHHHhh-h--CCeEEEEEecCCCCCCCCcCCCCHHHHHHH
Q 022920 204 CDADLSSQLKSASYAALKRMTGATQHEIPVIM--SGAGHDAMAMSH-L--TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 278 (290)
Q Consensus 204 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--s~g~~D~~~~~~-~--~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~ 278 (290)
.|+.....+++.+++. +++...-... +++|+|.+.+.. . +|++-+.+|... +|++.|....+|+...
T Consensus 373 td~~~~a~i~~la~~~------~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~--MHS~rE~~~~~D~~~~ 444 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA------NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLA--MHSIREMCGVVDIYYL 444 (465)
T ss_pred cCHHHHHHHHHHHHHc------CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcc--cccHHHHccHHHHHHH
Confidence 4678888899999876 4543322221 224777777644 2 888876666543 9999999999999888
Q ss_pred HHHHHHHHH
Q 022920 279 GLAVLAFLE 287 (290)
Q Consensus 279 ~~~~~~~l~ 287 (290)
.+.+..++.
T Consensus 445 ~~l~~af~~ 453 (465)
T PTZ00371 445 VKLIKAFFT 453 (465)
T ss_pred HHHHHHHHH
Confidence 888877664
No 78
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=56.81 E-value=33 Score=32.88 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=39.0
Q ss_pred eEEEEEEEEecCCCcceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Q 022920 134 LVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 194 (290)
Q Consensus 134 ~~~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~ 194 (290)
+++|+|.++.. -+.+.+.+++|+......+.+.++++++++... ..+++.-.
T Consensus 344 ~S~Nlg~v~~~-------~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g--~~~~~~~~ 395 (485)
T PRK15026 344 TSLNVGVVTMT-------DNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAG--AKTEAKGA 395 (485)
T ss_pred eeeEEEEEEEe-------CCEEEEEEEecCCCchHHHHHHHHHHHHHHHcC--cEEEEeCC
Confidence 56777777652 267999999999999999999999998865432 34555433
No 79
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=47.06 E-value=1.2e+02 Score=23.95 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=39.1
Q ss_pred ceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCe-EEEEEeecCCcCCCCHHHHHHHHHHHHHH
Q 022920 149 NVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS-CIVERKHDANAVMCDADLSSQLKSASYAA 219 (290)
Q Consensus 149 NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~-~e~~~~~~~~~~~~d~~l~~~~~~~~~~~ 219 (290)
++-.+.+.+.+++=+......+.+.+.+++.++.. |++ ++++. ...|++..| -+.+..++..+++
T Consensus 21 ~v~gd~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~~----Gv~~V~V~i-~~~p~Wt~d-~it~~gr~~l~~~ 86 (146)
T TIGR02159 21 DVDGGGVVVKFTPTYSGCPALEVIRQDIRDAVRAL----GVEVVEVST-SLDPPWTTD-WITEDAREKLREY 86 (146)
T ss_pred EEECCEEEEEEEeCCCCCchHHHHHHHHHHHHHhc----CCCeEEEeE-eeCCCCChH-HCCHHHHHHHHhc
Confidence 34456788888887777788888888888888652 432 33332 234566544 3333344444443
No 80
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=38.18 E-value=1.7e+02 Score=23.32 Aligned_cols=63 Identities=10% Similarity=0.087 Sum_probs=40.6
Q ss_pred EEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEee---cCCcCCCCHHHHHHHHHHHHHHH
Q 022920 156 TFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH---DANAVMCDADLSSQLKSASYAAL 220 (290)
Q Consensus 156 ~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~---~~~~~~~d~~l~~~~~~~~~~~~ 220 (290)
.+.+.+|.+ ..+..+...|++.+++.-....+++.+.... .......|.++++.+.++.+++-
T Consensus 30 ~Ldi~~rlP--~~l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~~~~~~~~~in~~l~~~y~~~l~~l~ 95 (159)
T PF03755_consen 30 FLDISIRLP--RELSSLEPEIRKLIRKKLSRGKVEVSIRVERSSESAVELRINEELAKAYYEALKELA 95 (159)
T ss_pred ceeeEEeCC--HHHHHHHHHHHHHHHHhcccceEEEEEEEEECcccCCCcccCHHHHHHHHHHHHHHH
Confidence 456666765 4466788888888877554444555444432 23456668888887777777653
No 81
>TIGR02945 SUF_assoc FeS assembly SUF system protein. Members of this family belong to the broader Pfam family pfam01883, or Domain of Unknown Function DUF59. Many members of DUF59 are candidate ring hydroxylating complex subunits. However, members of the narrower family defined here all are found in genomes that carry the FeS assembly SUF system. For 70 % of these species, the member of this protein family is found as part of the SUF locus, usually immediately downstream of the sufS gene.
Probab=33.07 E-value=1.8e+02 Score=20.86 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=21.1
Q ss_pred CeEEEEEEecCCChHHHHHHHHHHHHHHHHH
Q 022920 153 GEVTFTVDLRAIDDAGRETVLYELSNQLYQI 183 (290)
Q Consensus 153 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 183 (290)
+.+.+.+.+=+......+.+.+.+++.+..+
T Consensus 37 ~~v~i~l~l~~p~~~~~~~l~~~i~~al~~l 67 (99)
T TIGR02945 37 GHVDIQMTLTAPNCPVAGSMPGEVENAVRAV 67 (99)
T ss_pred CeEEEEEEECCCCCChHHHHHHHHHHHHHhC
Confidence 4566666665566677777888888877653
No 82
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=31.97 E-value=2.8e+02 Score=22.61 Aligned_cols=30 Identities=10% Similarity=0.183 Sum_probs=23.4
Q ss_pred eEEEEEEecCCChHHHHHHHHHHHHHHHHH
Q 022920 154 EVTFTVDLRAIDDAGRETVLYELSNQLYQI 183 (290)
Q Consensus 154 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 183 (290)
++.+.+.+=+......+.+.+.+++.+..+
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~l 143 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLAV 143 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHhC
Confidence 688888887777777888888888887653
No 83
>COG1828 PurS Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component [Nucleotide transport and metabolism]
Probab=29.51 E-value=28 Score=24.72 Aligned_cols=20 Identities=20% Similarity=-0.011 Sum_probs=18.0
Q ss_pred ccCCCCCCHHHHHHHCCCCc
Q 022920 5 NSFFSGVTVLDALRENSIDI 24 (290)
Q Consensus 5 ~~~~~g~~~~~~~~~~~~~~ 24 (290)
..|.+|.|+..||.+.||++
T Consensus 14 VlDPqG~ti~~aL~~lg~~~ 33 (83)
T COG1828 14 VLDPEGETIEKALHRLGYNE 33 (83)
T ss_pred ccCchhHHHHHHHHHcCCcc
Confidence 47899999999999999974
No 84
>PRK06156 hypothetical protein; Provisional
Probab=28.63 E-value=1.2e+02 Score=29.40 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=26.0
Q ss_pred EEEEEEEecCCCcceeCCeEEEEEEecCCChH-HHHHHHHHHHH
Q 022920 136 CTVGEISSWPSASNVIPGEVTFTVDLRAIDDA-GRETVLYELSN 178 (290)
Q Consensus 136 ~~vg~i~~~g~~~NvIP~~a~~~~diR~~~~~-~~~~v~~~i~~ 178 (290)
..+..+++ |+..|+||+.|.+. ++..+.+ ..+.+.+...+
T Consensus 241 ~~l~~~~g-G~~~n~ip~~a~~~--~~~~~~~~~~~~~~~~~~~ 281 (520)
T PRK06156 241 AEIVAMTG-GAFANQIPQTAVAT--LSGGDPAALAAALQAAAAA 281 (520)
T ss_pred eeEEEEEc-CCcCCCCCCccEEE--EecCCHHHHHHHHHHHHHH
Confidence 45677888 89999999999987 4444433 23334443333
No 85
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=27.83 E-value=1e+02 Score=21.72 Aligned_cols=54 Identities=15% Similarity=0.240 Sum_probs=33.1
Q ss_pred EEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEE--eecCCcCCCCHHHHHHH
Q 022920 156 TFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVER--KHDANAVMCDADLSSQL 212 (290)
Q Consensus 156 ~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~--~~~~~~~~~d~~l~~~~ 212 (290)
...+-||..++-...++.++|.+-++-.+.. ..+.... .....+. +|.++-.++
T Consensus 10 ~~tIaIrvp~~~~y~~L~~ki~~kLkl~~e~--i~LsYkde~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 10 KYTVAIQVARGLSYATLLQKISSKLELPAEH--ITLSYKSEASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEcCCCCCHHHHHHHHHHHhCCCchh--cEEEeccCCCCCccCc-ChHHHHHHH
Confidence 4477799999999999999988887643221 2333322 2234455 666654443
No 86
>PF09650 PHA_gran_rgn: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); InterPro: IPR013433 Proteins in this entry are encoded by genes involved in either polyhydroxyalkanoic acid (PHA) biosynthesis or utilisation, including proteins at found at the surface of PHA granules. These proteins have so far been predominantly found in the Pseudomonadales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.
Probab=20.35 E-value=1.9e+02 Score=20.57 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=23.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Q 022920 165 DDAGRETVLYELSNQLYQICEKRSVSCIVE 194 (290)
Q Consensus 165 ~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~ 194 (290)
-.-..++..+++++.+.+.+.+++++++++
T Consensus 7 H~Lg~~eAr~~~~~~~~~l~~~~~~~~~W~ 36 (87)
T PF09650_consen 7 HSLGREEARRRAEELAEKLAEEYGVECTWE 36 (87)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 344567888999999999998999887654
Done!