BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022922
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80358|FPG_ARATH Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana GN=FPG1
PE=1 SV=1
Length = 390
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/224 (83%), Positives = 202/224 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIE 224
>sp|Q8NNV7|FPG_CORGL Formamidopyrimidine-DNA glycosylase OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=mutM PE=3 SV=3
Length = 286
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 130/262 (49%), Gaps = 40/262 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ VELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKVELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR---- 223
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKAL 224
Query: 224 -------EALGVSLQFYKCYFA 238
+AL V++ YFA
Sbjct: 225 AQGGTSFDALYVNVNGNSGYFA 246
>sp|A4QFD9|FPG_CORGB Formamidopyrimidine-DNA glycosylase OS=Corynebacterium glutamicum
(strain R) GN=mutM PE=3 SV=1
Length = 286
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 121/235 (51%), Gaps = 29/235 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ +ELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKIELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDV 219
>sp|A5UUN1|FPG_ROSS1 Formamidopyrimidine-DNA glycosylase OS=Roseiflexus sp. (strain
RS-1) GN=mutM PE=3 SV=1
Length = 273
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ +G +IV+ D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V+ D P K++ + LDDG ++
Sbjct: 61 WILLFLDGGWTLALHLRMSGSL-------------TVQPADAPPDKHTHLVLRLDDGRQV 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L TV+ + L +K IK LLLDQ+
Sbjct: 108 FFRDPRKFGRARLLDADGRAALDAAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK-EVREAL---GVSLQFYKCY 236
I+GIGN ADE L++A+IHPL+ A LS + A L I+ +R+AL G +L+ Y+
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPASDLSADEVAALHDGIRAALRQALTNGGSTLRDYRNS 227
Query: 237 FAKPYVHKKH-----RENKIC 252
+ ++ H RE + C
Sbjct: 228 YGTRGTNQDHFNAYDREGQPC 248
>sp|A9B0X2|FPG_HERA2 Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=mutM PE=3 SV=1
Length = 273
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ +G+ V K++D S F ++ + I R+ K
Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ MTG + + DE +++ V LD+G EL
Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVAA-------------DEPADRHTHVVVALDNGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F + L+ D + V +++ LGP+ L + T+D+F LS+K IK LLDQS
Sbjct: 108 RFHDPRKFGRWSLV-DRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQS 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
++G+GN ADE L+ AKIHPL++A SL+ A L + IK V E G +L Y+
Sbjct: 167 VLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIEHRGTTLVNYRD 226
Query: 236 YFAKPYVHKKH-----RENKICR 253
+ ++ H R + CR
Sbjct: 227 AYGASGENQYHLEAYGRTGEPCR 249
>sp|Q8FP17|FPG_COREF Formamidopyrimidine-DNA glycosylase OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=mutM PE=3 SV=3
Length = 285
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 22/231 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ IV + + + ++ EA++ G + + +R+G
Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60
Query: 60 KNLWLRLD--SPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD + PS GM+G + VK D + + +
Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQML-------------VKSPDATLNPHLRARA 107
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
ELDDG E+ F D+R F L VP +S + D L + + + L K I
Sbjct: 108 ELDDGNEVWFVDQRTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLL+Q +SGIGN ADE+L++A IHP Q A +S LL+ +EV
Sbjct: 168 KRLLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREV 218
>sp|B2HJJ6|FPG_MYCMM Formamidopyrimidine-DNA glycosylase OS=Mycobacterium marinum
(strain ATCC BAA-535 / M) GN=mutM PE=3 SV=1
Length = 292
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 128/281 (45%), Gaps = 45/281 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
REAL V++ YF + + RE + CR
Sbjct: 225 REALAKGGTSFDSLYVNVNGQSGYFDR-SLDAYGREGEHCR 264
>sp|A0PQ49|FPG_MYCUA Formamidopyrimidine-DNA glycosylase OS=Mycobacterium ulcerans
(strain Agy99) GN=mutM PE=3 SV=1
Length = 292
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 128/281 (45%), Gaps = 45/281 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K +K LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V
Sbjct: 165 LRGKHSEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
REAL V++ YF + + RE + CR
Sbjct: 225 REALAKGGTSFDSLYVNVNGQSGYFDR-SLDAYGREGEHCR 264
>sp|Q03GC2|FPG_PEDPA Formamidopyrimidine-DNA glycosylase OS=Pediococcus pentosaceus
(strain ATCC 25745 / 183-1w) GN=mutM PE=3 SV=1
Length = 275
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK IV +++ +K++ A F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLAALVEGK-IVTNVVVRYSKMVS-PKAEIFAEELEGKKILNVRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + S + M + ++G + +V D E K+ ELDDG +L
Sbjct: 59 YLLIDF------SGDYTMVSHLRMEG-------KYSVVDRREEYGKHDHVIFELDDGKDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + V + +GP+ E +T++ T L +K +K+ LLDQ
Sbjct: 106 RYNDTRKFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
S I+G+GN ADEVL+ +KIHP Q + +L+ E A L + I E
Sbjct: 166 SMIAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFE 208
>sp|A8L594|FPG_FRASN Formamidopyrimidine-DNA glycosylase OS=Frankia sp. (strain EAN1pec)
GN=mutM PE=3 SV=1
Length = 291
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 125/246 (50%), Gaps = 13/246 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E +G+ + + + V ++ +D F AS++G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60
Query: 60 KNLWLRL--DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL L P P+ + G + + G Q D+ + F D+G
Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSG----QLLVVPADSPDQVHLRVRFRFT--DEG 114
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL F D+R F + +++ +P PI+ + PD L + F D+L +++ +K LL
Sbjct: 115 RELRFVDQRTFGGLAVVSGGAELPAPIAHIAPDPLSVDFDPERFADALRRRRTGLKRALL 174
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCY 236
DQ+ ISG+GN ADE L+ A++H + ++++ A L+ + VR + +L
Sbjct: 175 DQTLISGVGNIYADEGLWAARLHYARPTETVTR---AEALRLLDAVRTVMTAALAAGGTS 231
Query: 237 FAKPYV 242
F + YV
Sbjct: 232 FDRLYV 237
>sp|A7NQM8|FPG_ROSCS Formamidopyrimidine-DNA glycosylase OS=Roseiflexus castenholzii
(strain DSM 13941 / HLO8) GN=mutM PE=3 SV=1
Length = 283
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ G +I + D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V + P K++ + L+DG ++
Sbjct: 61 WILLFLDDGWTLALHLRMSGSL-------------TVHPAEAQPDKHTHLALRLEDGRQI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L + TV+ L +K IK LLLDQS
Sbjct: 108 FFLDPRKFGRARLLDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK-EVREAL---GVSLQFYKCY 236
I+GIGN ADE L++A+IHPL+ A LS A L I+ +R+AL G +L+ Y+
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGSTLRDYRNS 227
Query: 237 FAKPYVHKKH-----RENKIC 252
+ +++H RE + C
Sbjct: 228 YGAGGTNQEHFNAYDREGRPC 248
>sp|Q24XW2|FPG_DESHY Formamidopyrimidine-DNA glycosylase OS=Desulfitobacterium hafniense
(strain Y51) GN=mutM PE=3 SV=1
Length = 273
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
+ ++GIGN ADE L++A I P + A SL+KE L I +V E A G S + Y+
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
>sp|B8FU83|FPG_DESHD Formamidopyrimidine-DNA glycosylase OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=mutM PE=3 SV=1
Length = 273
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
+ ++GIGN ADE L++A I P + A SL+KE L I +V E A G S + Y+
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
>sp|A0LV85|FPG_ACIC1 Formamidopyrimidine-DNA glycosylase OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=mutM PE=3 SV=1
Length = 284
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G++I + + V A+DF ++G+ I + R+G
Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LDS GM+G + A P F D E
Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASPS------------PKHLRARFAFTDGDPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + L VP IS + PD L EF ++++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLTLAPLIADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+ ISG+GN ADE L++A++H V +S +C LL ++ V R AL
Sbjct: 169 TLISGVGNIYADEALWRARLHYATPTVDISAATCRRLLAALRAVFRAAL 217
>sp|A0QV21|FPG_MYCS2 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=fpg PE=3 SV=1
Length = 285
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV +ALG
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDALGQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDR-SLDAYGREGEPCR 254
>sp|A9WDC2|FPG_CHLAA Formamidopyrimidine-DNA glycosylase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=mutM PE=3
SV=1
Length = 278
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ G+ I D K++ S +F A + G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLT-PSPDEFAALIAGRRIEAIGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + M+G + + A +T E +++ F ++LD+G L
Sbjct: 60 WLLLSLDGEWTLAIHLRMSGQLLV-----------AEPETSE--ARHVHFALDLDNGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + GP+ L T + L ++ IKALLLDQ
Sbjct: 107 IFNDQRKFGRVHLLDRQGLAALDAVHGPEPLAADFTPSALAERLQNRRAPIKALLLDQHL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYKCY 236
I+GIGN A+E L+ A+IHPL L+ E L I+ V +EA+ G SL+ Y+
Sbjct: 167 IAGIGNIYANEALWLARIHPLTPGAMLTPEQINELHHAIRHVLQEAITNQGSSLRNYRDG 226
Query: 237 FAKPYVHKKH 246
+ + ++H
Sbjct: 227 YGRQGTQQEH 236
>sp|Q3ABL4|FPG_CARHZ Formamidopyrimidine-DNA glycosylase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mutM PE=3
SV=3
Length = 263
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 27/257 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + +GK I + + K+I VS +F V+GK I++ R+GK
Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLP-KIIKNVSVEEFTRRVVGKEIVALKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + MTG + I + + KD K++ +L D LEL
Sbjct: 60 YLLIDLSGKETVTVHLRMTGKLLI-------LPKGSPKD------KHTHAIFDLGD-LEL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + E+GP+ L + T + L + +KA+LLDQ
Sbjct: 106 HFNDIRQFGGFSF--------EMPEIGPEPLEDEFTPEYLKTKLKASQKNLKAVLLDQKI 157
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
I+GIGN ADE+L++A + P + A SLS++ L K I+++ ALG+ Y+ +
Sbjct: 158 IAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKIL-ALGIE---YRGTSIRD 213
Query: 241 YVHKKHRENKICRLFKV 257
YV ++++ RL KV
Sbjct: 214 YVDAENQQGSFQRLLKV 230
>sp|B0TER7|FPG_HELMI Formamidopyrimidine-DNA glycosylase OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=mutM PE=3 SV=1
Length = 277
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 17/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I K + K+ + + F ++ G+ I+ R+GK
Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEK-VELRLPKIAFALPGTLFTDALRGRRIIELGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD MTG + + R ++ E ++ FF LDDG L
Sbjct: 60 YLLLHLDGDETLVIHLRMTGRLI--------HLRPEEREEPEAAHTHAVFF--LDDGSLL 109
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F + L+ ++ P LGP+ L + + +F ++L K+K +K LLLDQ
Sbjct: 110 RYTDVRQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQ 169
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFY 233
S+++G+GN ADE L +A++HP +TA SL E L CI+ V + A G S + Y
Sbjct: 170 SFLAGLGNIYADEALARARLHPDRTADSLDDEESRRLYDCIRTVLQEGIDAKGTSFRDY 228
>sp|A0QJ66|FPG_MYCA1 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium avium (strain
104) GN=mutM PE=3 SV=1
Length = 283
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 124/272 (45%), Gaps = 36/272 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + V ++ R SA+ LDDG
Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAVPRAEHVRISAL----------------LDDG 104
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 TVLSFADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIK 164
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG---- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 RQLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGT 224
Query: 228 ------VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 SFDSLYVNVNGESGYFDRS-LDAYGREGESCR 255
>sp|A5D0T6|FPG_PELTS Formamidopyrimidine-DNA glycosylase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=mutM PE=3 SV=1
Length = 276
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 26/229 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR ++ G KI V+ ++ KVI S+F+ ++ K IL R+
Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLP---KVIRSPELSEFKETIADKKILKVGRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L + L + MTG +Y G + P++++ L +G
Sbjct: 58 GKYLLINLSEGYTLAVHLRMTGRLVYCAG--------------QDPPARHTHVIFNLSNG 103
Query: 118 LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D R+F ++ L+ PT + I ELG + L E T + L ++ IK
Sbjct: 104 CQLHFADMRQFGRIWLV--PTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKP 161
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLLDQ++I+G+GN ADE L++A+I+P + A +L+ A L + I+++
Sbjct: 162 LLLDQTFIAGLGNIYADEALHRARINPERLATTLTPREIARLYRAIRDL 210
>sp|A4FMJ7|FPG_SACEN Formamidopyrimidine-DNA glycosylase OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=mutM PE=3 SV=1
Length = 295
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 29/240 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G+ + + + V V DF + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60
Query: 60 KNLWLRLDSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFF 111
K +WL L P GM+G + ++ DE P + + +
Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQ--------------PDEAPDETHLRVR 106
Query: 112 VELDDG-LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
DDG +L F D+R F + L D +VP P++ + PD L ++ +
Sbjct: 107 FRFDDGGPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMR 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
K++ +K LLDQ+ +SGIGN ADE L++AK+H + +L++ TLL EV +A
Sbjct: 167 KRRTGVKRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQARTLLVAAVEVMQA 226
>sp|A4J4X3|FPG_DESRM Formamidopyrimidine-DNA glycosylase OS=Desulfotomaculum reducens
(strain MI-1) GN=mutM PE=3 SV=1
Length = 277
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R++E+H G ++ S+ +VI F ++G+ R+G
Sbjct: 1 MPELPEVETIVRSLEKHLSGL-VITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L + G+T I+++ Y D D K++ LD+G +
Sbjct: 60 KYLLLHMSD--------GLTLVIHLRMTGRLIYC-----DADLPLEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L+ + +P I E+GP+ L + + L +++ IK+LLLD
Sbjct: 107 LRFADVRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +++G+GN ADE L++AKIHP + A L+ + L K I EV
Sbjct: 167 QCFVAGLGNIYADEALHEAKIHPERLAPDLTSREASGLHKAIIEV 211
>sp|A3PXU1|FPG_MYCSJ Formamidopyrimidine-DNA glycosylase OS=Mycobacterium sp. (strain
JLS) GN=mutM PE=3 SV=1
Length = 296
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 122/281 (43%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----LDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
R+ALG V++ YF + + RE + CR
Sbjct: 226 RDALGQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>sp|B8G9X1|FPG_CHLAD Formamidopyrimidine-DNA glycosylase OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=mutM PE=3 SV=1
Length = 275
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ + + IV D +++ +F A V G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLT-PPPPEFAALVAGRRIEAVGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD+ G T AI+++ A D + + F ++LDDG L
Sbjct: 60 WLLLTLDA--------GWTLAIHLRMSGHLLVAEPAAAD-----APHVHFALDLDDGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + + GP+ L + T + L ++ IKALLLDQ
Sbjct: 107 IFDDQRKFGRVHLLDSTGLLALDAAHGPEPLTDDFTPAVLAERLRNRQAPIKALLLDQRL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYKCY 236
I+GIGN A+E L+ A IHPL +L+ + A L I+ V +A+ G SL+ Y+
Sbjct: 167 IAGIGNIYANEALWLAGIHPLTPGGTLTVDQIAALHHAIRLVLADAIANQGSSLRNYRDG 226
Query: 237 FAKPYVHKKH 246
+ + +++H
Sbjct: 227 YGRRGNYQEH 236
>sp|A6TFM6|FPG_KLEP7 Formamidopyrimidine-DNA glycosylase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=mutM PE=3
SV=1
Length = 269
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>sp|Q5YS09|FPG_NOCFA Formamidopyrimidine-DNA glycosylase OS=Nocardia farcinica (strain
IFM 10152) GN=mutM PE=3 SV=3
Length = 294
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + I V ++ S D A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60
Query: 60 KNLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL D P GM+G + ++ A K++
Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAPV-------------EKHAHI 107
Query: 111 FVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
LDDG EL F D+R F L D + VP P++ + D L + ++
Sbjct: 108 RAALDDGSELRFVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIR 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-- 223
K IK +LLDQ+ +SGIGN ADE L++A I+ + A L++ + LL ++ V
Sbjct: 168 AKNSEIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTRPAVRRLLAEVRAVMLE 227
Query: 224 ---------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + R+++ CR
Sbjct: 228 ALAAGGTSFDALYVNVNGQSGYFERALA-VYGRQDEPCR 265
>sp|P19210|FPG_BACFI Formamidopyrimidine-DNA glycosylase OS=Bacillus firmus GN=mutM PE=3
SV=3
Length = 274
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK I + N + + +FE ++ + I S R+GK
Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G R + + +E ++ DG EL
Sbjct: 61 FLLFEFDD-------IVMVSHLRMEG-------RYGLYEKEEPLPPHTHVIFHFTDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L V P++ LG + E T + ++ K IK LLDQ
Sbjct: 107 RYQDVRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
+ G+GN DE L++A+IHP + A SLSKE A L K I +E E G S++ Y
Sbjct: 167 KTVVGLGNIYVDEALFRARIHPERLAHSLSKEEMAVLHKAIVSTLEEAVEMGGSSIKSY 225
>sp|B1MDL2|FPG_MYCA9 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium abscessus
(strain ATCC 19977 / DSM 44196) GN=mutM PE=3 SV=1
Length = 286
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAV 216
>sp|Q1BAM5|FPG_MYCSS Formamidopyrimidine-DNA glycosylase OS=Mycobacterium sp. (strain
MCS) GN=mutM PE=3 SV=1
Length = 296
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----FDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
R+ALG V++ YF + + RE + CR
Sbjct: 226 RDALGQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>sp|A1UED7|FPG_MYCSK Formamidopyrimidine-DNA glycosylase OS=Mycobacterium sp. (strain
KMS) GN=mutM PE=3 SV=1
Length = 296
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----FDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
R+ALG V++ YF + + RE + CR
Sbjct: 226 RDALGQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>sp|Q74EG5|FPG_GEOSL Formamidopyrimidine-DNA glycosylase OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=mutM PE=3 SV=3
Length = 271
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 20/229 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G++ V ++ A K+ + + + G+ I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHVTGRR-VTAVTARAAKLRLPIP-PELGERLTGRVIERVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR GMTG + V P KY + LDDG L
Sbjct: 59 YLLLRCGDG-TAIIHLGMTGTLR-------------VAPAGSPPGKYDHLDLVLDDGRTL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIKALLLDQ 178
F D R+F V +DP + P +++LGP+ P+ + S S+K+ IK LL+D
Sbjct: 105 RFRDPRKFGLVLWTGSDPLAHPLLAQLGPEPF-PPLFNGSYLFSRSRKRNAAIKLLLMDN 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+ G+GN A+E L++A+IHP + A SLS+E CATL + +V R+A+
Sbjct: 164 RIVVGVGNIYANEALFRARIHPERAAGSLSEEDCATLATAVGDVLRDAI 212
>sp|B5XTG8|FPG_KLEP3 Formamidopyrimidine-DNA glycosylase OS=Klebsiella pneumoniae
(strain 342) GN=mutM PE=3 SV=1
Length = 269
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>sp|Q837G3|FPG_ENTFA Formamidopyrimidine-DNA glycosylase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=mutM PE=3 SV=3
Length = 280
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>sp|Q73VL9|FPG_MYCPA Formamidopyrimidine-DNA glycosylase OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=mutM
PE=3 SV=3
Length = 283
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + V ++ R SA+ LDDG
Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAVPRAEHVRISAL----------------LDDG 104
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
LSF D+R F L + D + +P P++ L D L L +K IK
Sbjct: 105 TVLSFADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIK 164
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
LLDQ +SGIGN ADE L++AK+H + A +++ +L EV R+AL
Sbjct: 165 RQLLDQQVVSGIGNIYADEALWRAKVHGARIAATMTGRQLTAVLDAAAEVMRDAL 219
>sp|Q88WV4|FPG_LACPL Formamidopyrimidine-DNA glycosylase OS=Lactobacillus plantarum
(strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutM PE=3
SV=3
Length = 274
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + V E K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEDQGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I E+ A+ G ++ +
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
F + ++H RE + C
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC 248
>sp|Q1WUN7|FPG_LACS1 Formamidopyrimidine-DNA glycosylase OS=Lactobacillus salivarius
(strain UCC118) GN=mutM PE=3 SV=1
Length = 276
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +++ S+F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVN--EESEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ + V++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEV---REALGVSLQFYK 234
+ ++G+GN ADEVL+ +KIHP A L++E L IKE+ EA G +++ Y
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKELALATEAGGTTIRSYT 225
Query: 235 CYF 237
F
Sbjct: 226 DAF 228
>sp|Q6MCT3|FPG_PARUW Formamidopyrimidine-DNA glycosylase OS=Protochlamydia amoebophila
(strain UWE25) GN=mutM PE=3 SV=3
Length = 276
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEE-HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEV + +++ IGKKI+ + I K + + F V G++I + R+G
Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWP-KTLAVPTPEIFCQQVQGQSIQNVDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +L + F MTG R + S Y + ++G +
Sbjct: 60 KYIIFQLSNQMFLIVHLRMTG-------------RFQFVTSQTPASPYVRIQFNFENGDQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F D R+F + L++D + I LGP+ LL T + F D + +K +K+LLLDQS
Sbjct: 107 LRFHDTRKFGRWYLVSDVEEI--IGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+I G+GN DE L++AK+HPL A ++ + L IK V E
Sbjct: 165 FIVGLGNIYVDEALWEAKLHPLIPANQINLKHLKILYHSIKYVLE 209
>sp|Q47S77|FPG_THEFY Formamidopyrimidine-DNA glycosylase OS=Thermobifida fusca (strain
YX) GN=mutM PE=3 SV=3
Length = 296
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ +G + + V A+DF A V G + A R+G
Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LDS GM+G + + + A ++ R + T ++ + +
Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAERHLRVRLPLT-------ARQGHDPEAP 113
Query: 118 LELSFTDKRRFAKV---RLLNDPTS--VPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
EL F D+R F + RL++D T +P IS + D L D F +L +K+ +
Sbjct: 114 QELRFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTEL 173
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQS ISGIGN ADE L+ +++H +LS+ ATLL ++EV
Sbjct: 174 KRALLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQVATLLAAVREV 224
>sp|A9HI30|FPG_GLUDA Formamidopyrimidine-DNA glycosylase OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=mutM PE=3 SV=1
Length = 286
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 23/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + H GK I + +A + +D A + G I R+ K
Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIAR--VAVRRADLRFPFPADLVARLEGATITGFARRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RLD+ GM+G + + ++ P ++ FF E DG
Sbjct: 59 YILIRLDTGDTLLLHLGMSGRVLL-----------SLPGDAPVPDRHEHFFFETTDGTRC 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPP----ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
D RRF V L+ PT+ ++ LGP+ L + + L++++ +IKA LL
Sbjct: 108 GLIDPRRFGAVDLM--PTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALL 165
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQF 232
DQ+ ++G+GN E L++A IHP + A +L A L++ I+ V REA+ G SL+
Sbjct: 166 DQTVVAGLGNIYVSEALFRAGIHPARLACTLDAAEDARLVQAIRAVLREAIAAGGSSLRD 225
Query: 233 Y 233
Y
Sbjct: 226 Y 226
>sp|Q74IB5|FPG_LACJO Formamidopyrimidine-DNA glycosylase OS=Lactobacillus johnsonii
(strain CNCM I-12250 / La1 / NCC 533) GN=mutM PE=3 SV=3
Length = 276
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ + +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVN--NPDEFVEKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + + D K+ DG L
Sbjct: 59 YLLFRF------SDDLTMVSHLRMEG-------KYHLVTPDHPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+Q+KIHPL +A S+ + L I
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHT 209
>sp|Q16DL0|FPG_ROSDO Formamidopyrimidine-DNA glycosylase OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=mutM PE=3 SV=1
Length = 283
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 15/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + +D A + GK + R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIAR---ADVNRPDLRWPFPADMAARLTGKRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + + G + Q+ S P K+ + +
Sbjct: 58 KYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHS-----HPAPEKHDHVVFHMANNAR 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ ++ +S LGP+ L ++ + +K++LLD
Sbjct: 113 ITFNDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
Q +SG+GN E L++AKIHP++ A +S ATL+ I+EV EA G SL+ +
Sbjct: 173 QRIVSGLGNIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVLAEAIEAGGSSLRDF 232
Query: 234 K 234
K
Sbjct: 233 K 233
>sp|A4TE57|FPG_MYCGI Formamidopyrimidine-DNA glycosylase OS=Mycobacterium gilvum (strain
PYR-GCK) GN=mutM PE=3 SV=1
Length = 282
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + + V + R AV LDDG
Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLLGPVRNENHLRIAVL---------------LDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ + D L + L +K IK
Sbjct: 106 LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----------- 223
LLDQ+ +SGIGN ADE L++AKI+ + A +SK A LL +V
Sbjct: 166 LLDQTVVSGIGNIYADESLWRAKINGARLASGVSKAKLAELLDAATDVMTDALAQGGTSF 225
Query: 224 EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
++L V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>sp|Q92BF1|FPG_LISIN Formamidopyrimidine-DNA glycosylase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=mutM PE=3 SV=3
Length = 273
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+HP + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTY 224
>sp|A8M661|FPG_SALAI Formamidopyrimidine-DNA glycosylase OS=Salinispora arenicola
(strain CNS-205) GN=mutM PE=3 SV=1
Length = 287
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ + + G++I + + + A+ F ++G + R+G
Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ A V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPGAAPDEAHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D L + F +L +++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSAGGAEMPTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+ +SG+GN ADE L++A++H + A L+ + L+ + VR+ LG +++ F
Sbjct: 169 TLLSGVGNIYADEALWRARLHGARPADGLTGPAA---LRLLGHVRDVLGEAIKEGGTSFD 225
Query: 239 KPYVH 243
YV+
Sbjct: 226 ALYVN 230
>sp|A4W514|FPG_ENT38 Formamidopyrimidine-DNA glycosylase OS=Enterobacter sp. (strain
638) GN=mutM PE=3 SV=1
Length = 269
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + S+ ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSNEIHTLSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS++ C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEQECEILVKVIKAV 205
>sp|B1VYY1|FPG_STRGG Formamidopyrimidine-DNA glycosylase OS=Streptomyces griseus subsp.
griseus (strain JCM 4626 / NBRC 13350) GN=mutM PE=3 SV=1
Length = 286
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LW+ +D GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLL-------------VRPADAPDEKHLRIRMRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRL-LNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHANTPDGLPETIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ A LL ++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNA 218
>sp|A5G7Q9|FPG_GEOUR Formamidopyrimidine-DNA glycosylase OS=Geobacter uraniireducens
(strain Rf4) GN=mutM PE=3 SV=1
Length = 271
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + +GK+I + + + D ++ + G+ I + R+GK
Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLP--LQPDLDSILSGRIISAVERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GMTG + + D P ++ + L+ GL L
Sbjct: 59 YLLVRFTAGTL-ILHLGMTGNLRLV-------------QADTPPGRHDHLDLVLNSGLCL 104
Query: 121 SFTDKRRFAK-VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
TD RRF+ V +DP +++ GP+ L + D ++IT+K ++D
Sbjct: 105 RLTDPRRFSTIVWTHDDPLRHTLLAKHGPEPLTGDFSGDYLYTKSRGRRITVKQFIMDSR 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN A E L++A IHP A +LS C L IKEV
Sbjct: 165 VLAGVGNIYACEALFRAGIHPETPAGALSTTHCLRLADTIKEV 207
>sp|B8GUQ6|FPG_THISH Formamidopyrimidine-DNA glycosylase OS=Thioalkalivibrio sp. (strain
HL-EbGR7) GN=mutM PE=3 SV=1
Length = 271
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR IE H G++ V S+I + ++ + G A LG+ + R
Sbjct: 1 MPELPEVETTRRGIERHVTGRR-VTSVIVREPRLRWPVPGDLAERLTGHTLGRVL----R 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L + +D+ GM+G++ + VT D K+ + LD G
Sbjct: 56 RAKYLLIEVDTGLL-LLHLGMSGSLRV----VT---------PDAPLRKHDHIDLCLDSG 101
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L D RRF V + P P+ +ELGP+ L + D S K+++ IK ++
Sbjct: 102 RCLRLHDPRRFGAVLWIEGPAHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIM 161
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN A E L+ A I P + A L++ CA L++ I++V
Sbjct: 162 NSHVVVGVGNIYASEALFLAGIRPGRAAGRLTRAECARLVETIRQV 207
>sp|Q8Y6W7|FPG_LISMO Formamidopyrimidine-DNA glycosylase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=mutM PE=3
SV=3
Length = 273
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + K K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTY 224
>sp|C6BUX8|FPG_DESAD Formamidopyrimidine-DNA glycosylase OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=mutM PE=3 SV=1
Length = 274
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSVK--MPWYLFSSRVAGEKITRIHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + T P +++ L DG +
Sbjct: 59 LLIMDLGDDLHITFHLKMTGRVLAHEGPTT-------------PEPHTRIVFGLTDGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L +T +E + ++ +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQEWDFYKNLGPEPL--EVTAEELAERITGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
S ++G GN ADE L+++ IHP A LS ES L+K E++ L ++Q
Sbjct: 164 SVVAGCGNIYADESLFRSGIHPKAKASDLSNES---LVKLFTELQAVLKQAIQ 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,635,393
Number of Sequences: 539616
Number of extensions: 4111603
Number of successful extensions: 11235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9998
Number of HSP's gapped (non-prelim): 535
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)